Multiple sequence alignment - TraesCS2B01G356400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G356400 chr2B 100.000 3180 0 0 1509 4688 508368316 508365137 0.000000e+00 5873.0
1 TraesCS2B01G356400 chr2B 100.000 1302 0 0 1 1302 508369824 508368523 0.000000e+00 2405.0
2 TraesCS2B01G356400 chr2B 94.702 151 6 2 1 150 406161883 406162032 2.820000e-57 233.0
3 TraesCS2B01G356400 chr2D 91.050 1486 78 16 1509 2982 430468611 430467169 0.000000e+00 1956.0
4 TraesCS2B01G356400 chr2D 87.788 1474 128 32 3216 4653 430466852 430465395 0.000000e+00 1677.0
5 TraesCS2B01G356400 chr2D 89.231 845 50 18 467 1302 430469454 430468642 0.000000e+00 1018.0
6 TraesCS2B01G356400 chr2D 89.744 156 11 2 3070 3220 556055658 556055813 1.330000e-45 195.0
7 TraesCS2B01G356400 chr2A 90.377 1486 87 16 1509 2982 555817502 555818943 0.000000e+00 1901.0
8 TraesCS2B01G356400 chr2A 87.302 1512 126 29 3216 4688 555819257 555820741 0.000000e+00 1668.0
9 TraesCS2B01G356400 chr2A 96.581 351 8 2 953 1302 555817124 555817471 3.150000e-161 579.0
10 TraesCS2B01G356400 chr2A 89.347 291 27 3 177 463 51641266 51641556 3.450000e-96 363.0
11 TraesCS2B01G356400 chr2A 93.464 153 7 1 3070 3219 107386657 107386505 1.700000e-54 224.0
12 TraesCS2B01G356400 chr2A 89.937 159 9 4 3070 3223 86446011 86445855 1.030000e-46 198.0
13 TraesCS2B01G356400 chr1D 86.731 1138 88 19 1865 2979 461762728 461763825 0.000000e+00 1206.0
14 TraesCS2B01G356400 chr1D 84.211 950 77 36 3218 4145 461764380 461765278 0.000000e+00 856.0
15 TraesCS2B01G356400 chr1D 82.274 519 55 17 4133 4646 461765347 461765833 9.390000e-112 414.0
16 TraesCS2B01G356400 chr1D 80.328 305 24 13 1004 1302 461762094 461762368 1.030000e-46 198.0
17 TraesCS2B01G356400 chr1D 88.462 130 10 2 3105 3229 37884064 37884193 8.120000e-33 152.0
18 TraesCS2B01G356400 chr1D 94.444 72 3 1 2984 3055 461764286 461764356 4.960000e-20 110.0
19 TraesCS2B01G356400 chr1B 85.230 1151 99 23 1854 2981 635103712 635104814 0.000000e+00 1118.0
20 TraesCS2B01G356400 chr1B 84.870 1150 104 22 1854 2981 634996369 634997470 0.000000e+00 1096.0
21 TraesCS2B01G356400 chr1B 83.932 946 85 30 3218 4145 634781110 634782006 0.000000e+00 843.0
22 TraesCS2B01G356400 chr1B 85.493 710 75 12 1854 2545 634779635 634780334 0.000000e+00 715.0
23 TraesCS2B01G356400 chr1B 83.195 482 56 11 4176 4646 634782108 634782575 7.260000e-113 418.0
24 TraesCS2B01G356400 chr1B 90.411 292 15 7 2694 2981 634780515 634780797 5.730000e-99 372.0
25 TraesCS2B01G356400 chr1B 89.965 289 25 3 177 461 683992161 683991873 2.060000e-98 370.0
26 TraesCS2B01G356400 chr1B 88.235 306 31 4 168 468 484457556 484457861 1.240000e-95 361.0
27 TraesCS2B01G356400 chr1B 89.883 257 23 3 4218 4473 635118788 635119042 1.260000e-85 327.0
28 TraesCS2B01G356400 chr1B 83.029 383 32 5 3218 3591 634997956 634998314 2.720000e-82 316.0
29 TraesCS2B01G356400 chr1B 79.123 479 46 19 848 1302 634778883 634779331 9.930000e-72 281.0
30 TraesCS2B01G356400 chr1B 78.093 493 49 29 838 1302 635102964 635103425 1.670000e-64 257.0
31 TraesCS2B01G356400 chr1B 77.890 493 50 22 838 1302 634995604 634996065 7.790000e-63 252.0
32 TraesCS2B01G356400 chr1B 87.432 183 17 2 3218 3394 635105283 635105465 6.150000e-49 206.0
33 TraesCS2B01G356400 chr1B 88.889 117 8 2 3995 4109 635117909 635118022 6.330000e-29 139.0
34 TraesCS2B01G356400 chr1B 80.702 171 12 8 4530 4688 635119375 635119536 3.830000e-21 113.0
35 TraesCS2B01G356400 chr1B 93.056 72 4 1 2984 3055 634781016 634781086 2.310000e-18 104.0
36 TraesCS2B01G356400 chr1B 98.000 50 1 0 3006 3055 635105210 635105259 2.320000e-13 87.9
37 TraesCS2B01G356400 chr1A 83.173 1040 97 43 3429 4424 553052403 553053408 0.000000e+00 880.0
38 TraesCS2B01G356400 chr1A 86.544 758 85 9 1854 2600 552979520 552980271 0.000000e+00 819.0
39 TraesCS2B01G356400 chr1A 83.025 866 92 33 3580 4414 552981356 552982197 0.000000e+00 734.0
40 TraesCS2B01G356400 chr1A 85.431 707 52 16 2226 2923 553051012 553051676 0.000000e+00 688.0
41 TraesCS2B01G356400 chr1A 85.475 358 39 5 1865 2218 553050604 553050952 1.240000e-95 361.0
42 TraesCS2B01G356400 chr1A 87.415 294 14 6 2694 2981 552980312 552980588 2.720000e-82 316.0
43 TraesCS2B01G356400 chr1A 85.197 304 27 7 3221 3522 552981072 552981359 3.550000e-76 296.0
44 TraesCS2B01G356400 chr1A 78.313 498 40 23 842 1302 552978750 552979216 4.650000e-65 259.0
45 TraesCS2B01G356400 chr1A 81.587 315 37 8 825 1118 553049775 553050089 1.690000e-59 241.0
46 TraesCS2B01G356400 chr1A 87.065 201 17 4 3218 3409 553052120 553052320 7.900000e-53 219.0
47 TraesCS2B01G356400 chr1A 90.968 155 7 3 3070 3219 516570620 516570468 7.950000e-48 202.0
48 TraesCS2B01G356400 chr1A 93.056 72 4 1 2984 3055 553052026 553052096 2.310000e-18 104.0
49 TraesCS2B01G356400 chr1A 87.931 58 6 1 651 708 285563548 285563492 3.030000e-07 67.6
50 TraesCS2B01G356400 chr4D 89.726 292 26 3 177 464 101498807 101499098 2.060000e-98 370.0
51 TraesCS2B01G356400 chr4D 87.742 155 14 2 3070 3219 428383560 428383406 4.820000e-40 176.0
52 TraesCS2B01G356400 chr4D 90.400 125 6 3 3073 3191 402553293 402553169 4.860000e-35 159.0
53 TraesCS2B01G356400 chr4D 91.549 71 3 3 3153 3220 502416981 502417051 1.390000e-15 95.3
54 TraesCS2B01G356400 chr7D 89.420 293 25 5 177 464 201831131 201830840 9.590000e-97 364.0
55 TraesCS2B01G356400 chr7D 95.105 143 7 0 1 143 33975459 33975601 4.720000e-55 226.0
56 TraesCS2B01G356400 chr7D 89.441 161 11 3 3065 3220 47404412 47404253 1.030000e-46 198.0
57 TraesCS2B01G356400 chr7D 89.375 160 11 3 3070 3223 4504314 4504155 3.700000e-46 196.0
58 TraesCS2B01G356400 chr7D 88.750 160 12 4 3065 3219 440256046 440255888 1.720000e-44 191.0
59 TraesCS2B01G356400 chr7D 90.441 136 8 2 3089 3219 377606782 377606647 1.730000e-39 174.0
60 TraesCS2B01G356400 chr5D 87.937 315 28 8 4198 4505 481667914 481667603 3.450000e-96 363.0
61 TraesCS2B01G356400 chr5D 87.948 307 32 4 168 469 497392884 497392578 1.600000e-94 357.0
62 TraesCS2B01G356400 chr5D 87.948 307 32 4 168 469 497393914 497393608 1.600000e-94 357.0
63 TraesCS2B01G356400 chr5D 86.061 165 12 7 3070 3228 534572670 534572829 2.900000e-37 167.0
64 TraesCS2B01G356400 chr6D 88.411 302 29 5 168 464 11913200 11913500 4.460000e-95 359.0
65 TraesCS2B01G356400 chr6D 83.030 165 15 6 3068 3219 464179682 464179846 2.280000e-28 137.0
66 TraesCS2B01G356400 chr6D 87.368 95 9 1 3128 3219 95721386 95721480 6.420000e-19 106.0
67 TraesCS2B01G356400 chr6D 93.103 58 3 1 651 708 386274082 386274026 3.010000e-12 84.2
68 TraesCS2B01G356400 chrUn 87.948 307 32 4 168 469 329701516 329701210 1.600000e-94 357.0
69 TraesCS2B01G356400 chrUn 89.091 165 13 2 3070 3229 95996574 95996410 2.860000e-47 200.0
70 TraesCS2B01G356400 chrUn 87.421 159 14 3 3066 3219 81495729 81495572 1.340000e-40 178.0
71 TraesCS2B01G356400 chrUn 86.538 156 16 2 3073 3223 112538406 112538561 2.900000e-37 167.0
72 TraesCS2B01G356400 chrUn 81.000 100 9 6 651 741 29857164 29857066 2.340000e-08 71.3
73 TraesCS2B01G356400 chr3B 97.163 141 4 0 2 142 635621351 635621491 6.060000e-59 239.0
74 TraesCS2B01G356400 chr7B 97.810 137 3 0 1 137 167186969 167187105 2.180000e-58 237.0
75 TraesCS2B01G356400 chr4B 96.479 142 5 0 1 142 323754885 323755026 7.840000e-58 235.0
76 TraesCS2B01G356400 chr4B 96.429 140 5 0 1 140 91269159 91269298 1.010000e-56 231.0
77 TraesCS2B01G356400 chr4B 97.037 135 4 0 2 136 517475526 517475660 1.310000e-55 228.0
78 TraesCS2B01G356400 chr4B 83.333 102 5 7 651 742 18717084 18716985 3.010000e-12 84.2
79 TraesCS2B01G356400 chr5B 94.118 153 9 0 1 153 475938524 475938676 2.820000e-57 233.0
80 TraesCS2B01G356400 chr5B 80.612 98 8 7 651 741 74672120 74672027 1.090000e-06 65.8
81 TraesCS2B01G356400 chr6B 94.595 148 6 2 1 147 565595689 565595835 1.310000e-55 228.0
82 TraesCS2B01G356400 chr6B 87.500 176 17 2 3316 3491 400147797 400147967 1.030000e-46 198.0
83 TraesCS2B01G356400 chr7A 90.968 155 9 2 3070 3219 130229695 130229541 2.210000e-48 204.0
84 TraesCS2B01G356400 chr3D 90.323 155 10 2 3070 3219 300567009 300566855 1.030000e-46 198.0
85 TraesCS2B01G356400 chr3D 87.879 165 13 4 3062 3219 61184742 61184578 2.230000e-43 187.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G356400 chr2B 508365137 508369824 4687 True 4139.000000 5873 100.000000 1 4688 2 chr2B.!!$R1 4687
1 TraesCS2B01G356400 chr2D 430465395 430469454 4059 True 1550.333333 1956 89.356333 467 4653 3 chr2D.!!$R1 4186
2 TraesCS2B01G356400 chr2A 555817124 555820741 3617 False 1382.666667 1901 91.420000 953 4688 3 chr2A.!!$F2 3735
3 TraesCS2B01G356400 chr1D 461762094 461765833 3739 False 556.800000 1206 85.597600 1004 4646 5 chr1D.!!$F2 3642
4 TraesCS2B01G356400 chr1B 634995604 634998314 2710 False 554.666667 1096 81.929667 838 3591 3 chr1B.!!$F3 2753
5 TraesCS2B01G356400 chr1B 634778883 634782575 3692 False 455.500000 843 85.868333 848 4646 6 chr1B.!!$F2 3798
6 TraesCS2B01G356400 chr1B 635102964 635105465 2501 False 417.225000 1118 87.188750 838 3394 4 chr1B.!!$F4 2556
7 TraesCS2B01G356400 chr1A 552978750 552982197 3447 False 484.800000 819 84.098800 842 4414 5 chr1A.!!$F1 3572
8 TraesCS2B01G356400 chr1A 553049775 553053408 3633 False 415.500000 880 85.964500 825 4424 6 chr1A.!!$F2 3599
9 TraesCS2B01G356400 chr5D 497392578 497393914 1336 True 357.000000 357 87.948000 168 469 2 chr5D.!!$R2 301

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
624 650 0.035739 AAAGCTTTGGCCATGCTTGG 59.964 50.0 33.08 14.22 44.94 3.61 F
1802 2343 1.070604 AGGCGATGGATGGGATGATT 58.929 50.0 0.00 0.00 0.00 2.57 F
3088 4351 0.032813 TACTCCCTCCGTTCCCGAAT 60.033 55.0 0.00 0.00 35.63 3.34 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1857 2398 0.041238 ATCTCCTCCACCTCGGTTGA 59.959 55.0 0.0 0.0 35.57 3.18 R
3675 5025 0.323629 TCTGCCCTTACTTCAACCCG 59.676 55.0 0.0 0.0 0.00 5.28 R
4657 6233 0.249120 TGGGTCGATGAACGCTGATT 59.751 50.0 0.0 0.0 42.26 2.57 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
22 23 4.553678 CAGGAAGTAGGGTATTACCTCCA 58.446 47.826 16.39 0.80 42.09 3.86
23 24 5.155905 CAGGAAGTAGGGTATTACCTCCAT 58.844 45.833 16.39 4.17 42.09 3.41
24 25 6.320518 CAGGAAGTAGGGTATTACCTCCATA 58.679 44.000 16.39 3.42 42.09 2.74
25 26 6.437793 CAGGAAGTAGGGTATTACCTCCATAG 59.562 46.154 16.39 6.09 42.09 2.23
26 27 6.337472 AGGAAGTAGGGTATTACCTCCATAGA 59.663 42.308 16.39 0.00 42.09 1.98
27 28 6.664384 GGAAGTAGGGTATTACCTCCATAGAG 59.336 46.154 12.54 0.00 42.09 2.43
28 29 7.417811 AAGTAGGGTATTACCTCCATAGAGA 57.582 40.000 12.54 0.00 43.39 3.10
29 30 7.034967 AGTAGGGTATTACCTCCATAGAGAG 57.965 44.000 12.54 0.00 43.39 3.20
35 36 3.784573 CTCCATAGAGAGGGCCCG 58.215 66.667 18.44 0.00 43.39 6.13
36 37 1.153989 CTCCATAGAGAGGGCCCGA 59.846 63.158 18.44 3.54 43.39 5.14
37 38 0.470080 CTCCATAGAGAGGGCCCGAA 60.470 60.000 18.44 0.98 43.39 4.30
38 39 0.759436 TCCATAGAGAGGGCCCGAAC 60.759 60.000 18.44 12.45 0.00 3.95
39 40 1.749033 CATAGAGAGGGCCCGAACC 59.251 63.158 18.44 7.31 0.00 3.62
47 48 2.758434 GGCCCGAACCCAGGTAAA 59.242 61.111 0.00 0.00 0.00 2.01
48 49 1.676635 GGCCCGAACCCAGGTAAAC 60.677 63.158 0.00 0.00 0.00 2.01
49 50 1.073548 GCCCGAACCCAGGTAAACA 59.926 57.895 0.00 0.00 0.00 2.83
50 51 0.323087 GCCCGAACCCAGGTAAACAT 60.323 55.000 0.00 0.00 0.00 2.71
51 52 1.746470 CCCGAACCCAGGTAAACATC 58.254 55.000 0.00 0.00 0.00 3.06
52 53 1.365699 CCGAACCCAGGTAAACATCG 58.634 55.000 1.69 1.69 0.00 3.84
53 54 1.338389 CCGAACCCAGGTAAACATCGT 60.338 52.381 7.00 0.00 0.00 3.73
54 55 1.730064 CGAACCCAGGTAAACATCGTG 59.270 52.381 0.00 0.00 0.00 4.35
55 56 2.774687 GAACCCAGGTAAACATCGTGT 58.225 47.619 0.00 0.00 0.00 4.49
56 57 2.467566 ACCCAGGTAAACATCGTGTC 57.532 50.000 0.00 0.00 0.00 3.67
57 58 1.975680 ACCCAGGTAAACATCGTGTCT 59.024 47.619 0.00 0.00 0.00 3.41
58 59 2.028385 ACCCAGGTAAACATCGTGTCTC 60.028 50.000 0.00 0.00 0.00 3.36
59 60 2.618053 CCAGGTAAACATCGTGTCTCC 58.382 52.381 0.00 0.00 0.00 3.71
60 61 2.618053 CAGGTAAACATCGTGTCTCCC 58.382 52.381 0.00 0.00 0.00 4.30
61 62 1.203994 AGGTAAACATCGTGTCTCCCG 59.796 52.381 0.00 0.00 0.00 5.14
62 63 0.997196 GTAAACATCGTGTCTCCCGC 59.003 55.000 0.00 0.00 0.00 6.13
63 64 0.108520 TAAACATCGTGTCTCCCGCC 60.109 55.000 0.00 0.00 0.00 6.13
64 65 1.827399 AAACATCGTGTCTCCCGCCT 61.827 55.000 0.00 0.00 0.00 5.52
65 66 2.105128 CATCGTGTCTCCCGCCTC 59.895 66.667 0.00 0.00 0.00 4.70
66 67 3.148279 ATCGTGTCTCCCGCCTCC 61.148 66.667 0.00 0.00 0.00 4.30
67 68 3.663815 ATCGTGTCTCCCGCCTCCT 62.664 63.158 0.00 0.00 0.00 3.69
68 69 4.135153 CGTGTCTCCCGCCTCCTG 62.135 72.222 0.00 0.00 0.00 3.86
69 70 2.997897 GTGTCTCCCGCCTCCTGT 60.998 66.667 0.00 0.00 0.00 4.00
70 71 2.203788 TGTCTCCCGCCTCCTGTT 60.204 61.111 0.00 0.00 0.00 3.16
71 72 1.077805 TGTCTCCCGCCTCCTGTTA 59.922 57.895 0.00 0.00 0.00 2.41
72 73 1.255667 TGTCTCCCGCCTCCTGTTAC 61.256 60.000 0.00 0.00 0.00 2.50
73 74 1.684734 TCTCCCGCCTCCTGTTACC 60.685 63.158 0.00 0.00 0.00 2.85
74 75 1.987855 CTCCCGCCTCCTGTTACCA 60.988 63.158 0.00 0.00 0.00 3.25
75 76 1.306654 TCCCGCCTCCTGTTACCAT 60.307 57.895 0.00 0.00 0.00 3.55
76 77 0.912487 TCCCGCCTCCTGTTACCATT 60.912 55.000 0.00 0.00 0.00 3.16
77 78 0.834612 CCCGCCTCCTGTTACCATTA 59.165 55.000 0.00 0.00 0.00 1.90
78 79 1.202651 CCCGCCTCCTGTTACCATTAG 60.203 57.143 0.00 0.00 0.00 1.73
79 80 1.583054 CGCCTCCTGTTACCATTAGC 58.417 55.000 0.00 0.00 0.00 3.09
80 81 1.810412 CGCCTCCTGTTACCATTAGCC 60.810 57.143 0.00 0.00 0.00 3.93
81 82 1.490910 GCCTCCTGTTACCATTAGCCT 59.509 52.381 0.00 0.00 0.00 4.58
82 83 2.092375 GCCTCCTGTTACCATTAGCCTT 60.092 50.000 0.00 0.00 0.00 4.35
83 84 3.135895 GCCTCCTGTTACCATTAGCCTTA 59.864 47.826 0.00 0.00 0.00 2.69
84 85 4.743955 GCCTCCTGTTACCATTAGCCTTAG 60.744 50.000 0.00 0.00 0.00 2.18
85 86 4.654262 CCTCCTGTTACCATTAGCCTTAGA 59.346 45.833 0.00 0.00 0.00 2.10
86 87 5.453480 CCTCCTGTTACCATTAGCCTTAGAC 60.453 48.000 0.00 0.00 0.00 2.59
87 88 4.098960 TCCTGTTACCATTAGCCTTAGACG 59.901 45.833 0.00 0.00 0.00 4.18
88 89 3.788937 TGTTACCATTAGCCTTAGACGC 58.211 45.455 0.00 0.00 0.00 5.19
89 90 3.196039 TGTTACCATTAGCCTTAGACGCA 59.804 43.478 0.00 0.00 0.00 5.24
90 91 2.311124 ACCATTAGCCTTAGACGCAC 57.689 50.000 0.00 0.00 0.00 5.34
91 92 1.553248 ACCATTAGCCTTAGACGCACA 59.447 47.619 0.00 0.00 0.00 4.57
92 93 2.205074 CCATTAGCCTTAGACGCACAG 58.795 52.381 0.00 0.00 0.00 3.66
93 94 2.418746 CCATTAGCCTTAGACGCACAGT 60.419 50.000 0.00 0.00 0.00 3.55
94 95 3.262420 CATTAGCCTTAGACGCACAGTT 58.738 45.455 0.00 0.00 0.00 3.16
95 96 2.649331 TAGCCTTAGACGCACAGTTC 57.351 50.000 0.00 0.00 0.00 3.01
96 97 0.388649 AGCCTTAGACGCACAGTTCG 60.389 55.000 0.00 0.00 0.00 3.95
97 98 1.352156 GCCTTAGACGCACAGTTCGG 61.352 60.000 0.00 0.00 0.00 4.30
98 99 0.736325 CCTTAGACGCACAGTTCGGG 60.736 60.000 0.00 0.00 0.00 5.14
99 100 0.242825 CTTAGACGCACAGTTCGGGA 59.757 55.000 0.00 0.00 0.00 5.14
100 101 0.038892 TTAGACGCACAGTTCGGGAC 60.039 55.000 0.00 0.00 0.00 4.46
101 102 1.870055 TAGACGCACAGTTCGGGACC 61.870 60.000 0.00 0.00 0.00 4.46
102 103 4.309950 ACGCACAGTTCGGGACCC 62.310 66.667 0.00 0.00 0.00 4.46
104 105 4.717313 GCACAGTTCGGGACCCCC 62.717 72.222 4.46 0.00 41.09 5.40
105 106 2.928396 CACAGTTCGGGACCCCCT 60.928 66.667 4.46 0.00 42.67 4.79
106 107 1.611261 CACAGTTCGGGACCCCCTA 60.611 63.158 4.46 0.00 42.67 3.53
107 108 1.611556 ACAGTTCGGGACCCCCTAC 60.612 63.158 4.46 0.29 42.67 3.18
108 109 2.040114 AGTTCGGGACCCCCTACC 59.960 66.667 4.46 0.00 42.67 3.18
109 110 3.085947 GTTCGGGACCCCCTACCC 61.086 72.222 4.46 0.00 42.67 3.69
113 114 3.759101 GGGACCCCCTACCCGAGA 61.759 72.222 0.00 0.00 41.34 4.04
114 115 2.613421 GGACCCCCTACCCGAGAT 59.387 66.667 0.00 0.00 0.00 2.75
115 116 1.533513 GGACCCCCTACCCGAGATC 60.534 68.421 0.00 0.00 0.00 2.75
116 117 1.533513 GACCCCCTACCCGAGATCC 60.534 68.421 0.00 0.00 0.00 3.36
117 118 2.600769 CCCCCTACCCGAGATCCG 60.601 72.222 0.00 0.00 38.18 4.18
118 119 3.303928 CCCCTACCCGAGATCCGC 61.304 72.222 0.00 0.00 36.84 5.54
119 120 3.303928 CCCTACCCGAGATCCGCC 61.304 72.222 0.00 0.00 36.84 6.13
120 121 3.671411 CCTACCCGAGATCCGCCG 61.671 72.222 0.00 0.00 36.84 6.46
121 122 3.671411 CTACCCGAGATCCGCCGG 61.671 72.222 0.00 0.00 44.94 6.13
122 123 4.511246 TACCCGAGATCCGCCGGT 62.511 66.667 1.63 11.60 43.93 5.28
125 126 3.528370 CCGAGATCCGCCGGTCTT 61.528 66.667 1.63 0.00 40.78 3.01
126 127 2.278857 CGAGATCCGCCGGTCTTG 60.279 66.667 1.63 5.83 0.00 3.02
127 128 2.771639 CGAGATCCGCCGGTCTTGA 61.772 63.158 14.23 0.00 0.00 3.02
128 129 1.227002 GAGATCCGCCGGTCTTGAC 60.227 63.158 1.63 0.00 0.00 3.18
129 130 1.945354 GAGATCCGCCGGTCTTGACA 61.945 60.000 1.63 0.00 0.00 3.58
130 131 1.810030 GATCCGCCGGTCTTGACAC 60.810 63.158 1.63 0.00 0.00 3.67
131 132 3.310860 ATCCGCCGGTCTTGACACC 62.311 63.158 1.63 0.00 0.00 4.16
137 138 4.355925 GGTCTTGACACCGACACC 57.644 61.111 3.08 0.00 31.88 4.16
138 139 1.301479 GGTCTTGACACCGACACCC 60.301 63.158 3.08 0.00 31.88 4.61
139 140 1.301479 GTCTTGACACCGACACCCC 60.301 63.158 0.00 0.00 0.00 4.95
140 141 1.458777 TCTTGACACCGACACCCCT 60.459 57.895 0.00 0.00 0.00 4.79
141 142 1.004918 CTTGACACCGACACCCCTC 60.005 63.158 0.00 0.00 0.00 4.30
142 143 2.450479 CTTGACACCGACACCCCTCC 62.450 65.000 0.00 0.00 0.00 4.30
143 144 4.065281 GACACCGACACCCCTCCG 62.065 72.222 0.00 0.00 0.00 4.63
144 145 4.928140 ACACCGACACCCCTCCGT 62.928 66.667 0.00 0.00 0.00 4.69
145 146 3.622826 CACCGACACCCCTCCGTT 61.623 66.667 0.00 0.00 0.00 4.44
146 147 3.308705 ACCGACACCCCTCCGTTC 61.309 66.667 0.00 0.00 0.00 3.95
147 148 4.078516 CCGACACCCCTCCGTTCC 62.079 72.222 0.00 0.00 0.00 3.62
148 149 3.307906 CGACACCCCTCCGTTCCA 61.308 66.667 0.00 0.00 0.00 3.53
149 150 2.346365 GACACCCCTCCGTTCCAC 59.654 66.667 0.00 0.00 0.00 4.02
150 151 2.446994 ACACCCCTCCGTTCCACA 60.447 61.111 0.00 0.00 0.00 4.17
151 152 2.047213 GACACCCCTCCGTTCCACAA 62.047 60.000 0.00 0.00 0.00 3.33
152 153 1.378762 CACCCCTCCGTTCCACAAT 59.621 57.895 0.00 0.00 0.00 2.71
153 154 0.960364 CACCCCTCCGTTCCACAATG 60.960 60.000 0.00 0.00 0.00 2.82
154 155 2.046285 CCCCTCCGTTCCACAATGC 61.046 63.158 0.00 0.00 0.00 3.56
155 156 1.303236 CCCTCCGTTCCACAATGCA 60.303 57.895 0.00 0.00 0.00 3.96
156 157 1.308069 CCCTCCGTTCCACAATGCAG 61.308 60.000 0.00 0.00 0.00 4.41
157 158 0.606401 CCTCCGTTCCACAATGCAGT 60.606 55.000 0.00 0.00 0.00 4.40
158 159 0.518636 CTCCGTTCCACAATGCAGTG 59.481 55.000 13.51 13.51 39.21 3.66
159 160 0.179032 TCCGTTCCACAATGCAGTGT 60.179 50.000 15.16 15.16 37.82 3.55
160 161 1.070914 TCCGTTCCACAATGCAGTGTA 59.929 47.619 20.73 1.96 37.82 2.90
161 162 2.083774 CCGTTCCACAATGCAGTGTAT 58.916 47.619 20.73 0.00 37.82 2.29
162 163 3.055747 TCCGTTCCACAATGCAGTGTATA 60.056 43.478 20.73 8.08 37.82 1.47
163 164 3.309682 CCGTTCCACAATGCAGTGTATAG 59.690 47.826 20.73 11.77 37.82 1.31
164 165 4.180817 CGTTCCACAATGCAGTGTATAGA 58.819 43.478 20.73 13.93 37.82 1.98
165 166 4.811024 CGTTCCACAATGCAGTGTATAGAT 59.189 41.667 20.73 0.00 37.82 1.98
166 167 5.983118 CGTTCCACAATGCAGTGTATAGATA 59.017 40.000 20.73 5.88 37.82 1.98
167 168 6.646653 CGTTCCACAATGCAGTGTATAGATAT 59.353 38.462 20.73 0.00 37.82 1.63
168 169 7.171508 CGTTCCACAATGCAGTGTATAGATATT 59.828 37.037 20.73 0.00 37.82 1.28
169 170 8.840321 GTTCCACAATGCAGTGTATAGATATTT 58.160 33.333 20.73 0.00 37.82 1.40
170 171 8.978874 TCCACAATGCAGTGTATAGATATTTT 57.021 30.769 20.73 0.00 37.82 1.82
171 172 9.407380 TCCACAATGCAGTGTATAGATATTTTT 57.593 29.630 20.73 0.00 37.82 1.94
204 207 1.208259 CGCAAGCTCATATACACGCA 58.792 50.000 0.00 0.00 0.00 5.24
208 211 3.605461 GCAAGCTCATATACACGCACATG 60.605 47.826 0.00 0.00 0.00 3.21
215 218 2.028420 ATACACGCACATGCACTCAT 57.972 45.000 4.49 0.00 42.21 2.90
244 247 1.671054 GCACACACGCACACCCTAT 60.671 57.895 0.00 0.00 0.00 2.57
256 259 2.909006 CACACCCTATCCCTATGAGCAT 59.091 50.000 0.00 0.00 0.00 3.79
268 271 4.442052 CCCTATGAGCATCTTCGAAAGACA 60.442 45.833 0.00 0.00 41.01 3.41
275 278 1.244816 TCTTCGAAAGACAGAGCCGA 58.755 50.000 0.00 0.00 41.84 5.54
279 282 2.089201 TCGAAAGACAGAGCCGACATA 58.911 47.619 0.00 0.00 33.31 2.29
287 290 5.073428 AGACAGAGCCGACATATCATCTTA 58.927 41.667 0.00 0.00 0.00 2.10
343 346 2.363297 GGAAACGTCTCCTCCCACT 58.637 57.895 0.00 0.00 32.21 4.00
346 349 0.680061 AAACGTCTCCTCCCACTGAC 59.320 55.000 0.00 0.00 0.00 3.51
350 353 1.979155 TCTCCTCCCACTGACTGCG 60.979 63.158 0.00 0.00 0.00 5.18
353 356 2.031012 CTCCCACTGACTGCGCAA 59.969 61.111 13.05 0.00 0.00 4.85
354 357 1.376424 CTCCCACTGACTGCGCAAT 60.376 57.895 13.05 0.00 0.00 3.56
357 360 2.330372 CCACTGACTGCGCAATGCT 61.330 57.895 13.05 0.00 46.63 3.79
367 370 1.274596 GCGCAATGCTGAAAATCCTG 58.725 50.000 0.30 0.00 41.73 3.86
377 380 9.373603 CAATGCTGAAAATCCTGAAATAAATCA 57.626 29.630 0.00 0.00 0.00 2.57
393 396 8.579682 AAATAAATCAAGGAATAAATGCGAGC 57.420 30.769 0.00 0.00 0.00 5.03
399 402 2.092968 AGGAATAAATGCGAGCACCAGA 60.093 45.455 0.00 0.00 0.00 3.86
401 404 3.316308 GGAATAAATGCGAGCACCAGAAT 59.684 43.478 0.00 0.00 0.00 2.40
409 412 2.154462 CGAGCACCAGAATTTGAACCT 58.846 47.619 0.00 0.00 0.00 3.50
417 422 3.420893 CAGAATTTGAACCTGTGGGCTA 58.579 45.455 0.00 0.00 35.63 3.93
446 451 1.273606 ACAGTCACTCGAACCATCCAG 59.726 52.381 0.00 0.00 0.00 3.86
447 452 1.273606 CAGTCACTCGAACCATCCAGT 59.726 52.381 0.00 0.00 0.00 4.00
457 462 1.434188 ACCATCCAGTCACAGGTTGA 58.566 50.000 0.00 0.00 0.00 3.18
464 469 2.079158 CAGTCACAGGTTGATTCGCAT 58.921 47.619 0.00 0.00 36.32 4.73
475 480 5.483937 AGGTTGATTCGCATGGGTATAGATA 59.516 40.000 9.86 0.00 0.00 1.98
480 485 9.952030 TTGATTCGCATGGGTATAGATATTTTA 57.048 29.630 9.86 0.00 0.00 1.52
582 587 9.740239 TTAGATACATGACAATACGTACTTTCC 57.260 33.333 0.00 0.00 0.00 3.13
594 599 8.411683 CAATACGTACTTTCCTATTGTACTCCT 58.588 37.037 0.00 0.00 35.67 3.69
597 623 6.127507 ACGTACTTTCCTATTGTACTCCTTCC 60.128 42.308 0.00 0.00 35.67 3.46
602 628 2.034305 CCTATTGTACTCCTTCCGTCCG 59.966 54.545 0.00 0.00 0.00 4.79
614 640 0.948678 TCCGTCCGAAAAAGCTTTGG 59.051 50.000 13.54 10.09 0.00 3.28
617 643 0.387565 GTCCGAAAAAGCTTTGGCCA 59.612 50.000 13.54 0.00 39.73 5.36
618 644 1.000843 GTCCGAAAAAGCTTTGGCCAT 59.999 47.619 13.54 0.00 39.73 4.40
619 645 1.000731 TCCGAAAAAGCTTTGGCCATG 59.999 47.619 13.54 3.68 39.73 3.66
620 646 0.792031 CGAAAAAGCTTTGGCCATGC 59.208 50.000 19.81 19.81 39.73 4.06
621 647 1.606224 CGAAAAAGCTTTGGCCATGCT 60.606 47.619 23.11 23.11 39.73 3.79
623 649 1.886886 AAAAGCTTTGGCCATGCTTG 58.113 45.000 33.08 14.36 44.94 4.01
624 650 0.035739 AAAGCTTTGGCCATGCTTGG 59.964 50.000 33.08 14.22 44.94 3.61
625 651 1.833787 AAGCTTTGGCCATGCTTGGG 61.834 55.000 32.38 11.15 44.16 4.12
626 652 2.983791 CTTTGGCCATGCTTGGGG 59.016 61.111 19.47 0.10 43.84 4.96
735 761 9.697250 TTTTCGAGAAAATTTATATGCACTACG 57.303 29.630 6.89 0.00 35.57 3.51
746 779 3.735237 ATGCACTACGTTATGAGGAGG 57.265 47.619 0.00 0.00 0.00 4.30
747 780 2.730382 TGCACTACGTTATGAGGAGGA 58.270 47.619 0.00 0.00 0.00 3.71
758 791 2.198183 GAGGAGGACTCACTCAGGC 58.802 63.158 1.32 0.00 45.85 4.85
760 793 1.979693 GGAGGACTCACTCAGGCGT 60.980 63.158 1.32 0.00 39.27 5.68
827 860 2.267324 GCAGGGAGGAGTGCAGAC 59.733 66.667 0.00 0.00 39.62 3.51
830 863 2.267324 GGGAGGAGTGCAGACTGC 59.733 66.667 20.86 20.86 45.29 4.40
843 876 3.332919 GCAGACTGCAGAGAATTGAGAA 58.667 45.455 23.35 0.00 44.26 2.87
855 888 6.537660 CAGAGAATTGAGAATGCAGATGTACA 59.462 38.462 0.00 0.00 0.00 2.90
1802 2343 1.070604 AGGCGATGGATGGGATGATT 58.929 50.000 0.00 0.00 0.00 2.57
1975 2516 4.301628 GTGCTAGTTTGCTGAATGCTTTT 58.698 39.130 0.00 0.00 43.37 2.27
1985 2526 3.367025 GCTGAATGCTTTTCTTGATGTGC 59.633 43.478 2.42 0.00 38.95 4.57
1988 2529 5.224888 TGAATGCTTTTCTTGATGTGCTTC 58.775 37.500 2.42 0.00 0.00 3.86
1992 2533 4.821260 TGCTTTTCTTGATGTGCTTCTGTA 59.179 37.500 0.00 0.00 0.00 2.74
2016 2560 6.512297 AGTAAAATTGATTTGTTTGCGTCCT 58.488 32.000 0.00 0.00 32.27 3.85
2019 2563 4.582701 ATTGATTTGTTTGCGTCCTTGA 57.417 36.364 0.00 0.00 0.00 3.02
2061 2605 4.682787 TGTGCATCGGTTATTAGACTGAG 58.317 43.478 0.00 0.00 38.26 3.35
2063 2607 4.979197 GTGCATCGGTTATTAGACTGAGAG 59.021 45.833 0.00 0.00 38.26 3.20
2070 2614 6.037098 CGGTTATTAGACTGAGAGGAAACAG 58.963 44.000 0.00 0.00 39.65 3.16
2111 2655 4.926860 TCTTGTGCACATATTTGAGTCG 57.073 40.909 22.39 0.00 0.00 4.18
2130 2674 3.096092 TCGGAATCCAAGGAATTTTGGG 58.904 45.455 8.69 0.00 46.16 4.12
2135 2679 6.115446 GGAATCCAAGGAATTTTGGGATTTC 58.885 40.000 11.73 7.80 46.16 2.17
2145 2689 2.380064 TTGGGATTTCAGTTGGCACT 57.620 45.000 0.00 0.00 0.00 4.40
2165 2716 6.706716 GGCACTCTGGATATAACTTAGGTTTC 59.293 42.308 0.00 0.00 36.92 2.78
2259 2874 2.180432 AAGGTTAAACCGGTCTCTGC 57.820 50.000 8.04 0.00 44.90 4.26
2298 2922 2.292267 CAGCAGGGCCAACTACTAATG 58.708 52.381 6.18 0.00 0.00 1.90
2309 2933 5.619981 GCCAACTACTAATGCCAACTTCTTG 60.620 44.000 0.00 0.00 0.00 3.02
2352 2976 8.728337 TCCTGTTTGAATCAGATCTTATTCAG 57.272 34.615 24.31 16.21 41.68 3.02
2456 3092 6.247676 TGGCATGGATATGTAATATGCTTGT 58.752 36.000 0.00 0.00 46.96 3.16
2507 3145 3.161866 TGTGCATGTACAGGACAGAGTA 58.838 45.455 13.02 0.00 42.79 2.59
2524 3162 8.200792 GGACAGAGTATCAGTTCATCTTATTGT 58.799 37.037 0.00 0.00 33.82 2.71
2563 3261 6.494893 TGCTACGTTTTCTTTAATCTGCAT 57.505 33.333 0.00 0.00 0.00 3.96
2629 3327 2.025155 GTCAGAATCTCGTGAGGGCTA 58.975 52.381 0.00 0.00 0.00 3.93
2652 3350 2.540931 GCTGCAAAATGTGAAAGTGGTG 59.459 45.455 0.00 0.00 0.00 4.17
2667 3365 0.415830 TGGTGGAGTGGGACCTCATA 59.584 55.000 0.00 0.00 32.91 2.15
2668 3366 0.831307 GGTGGAGTGGGACCTCATAC 59.169 60.000 0.00 0.00 32.91 2.39
2669 3367 0.831307 GTGGAGTGGGACCTCATACC 59.169 60.000 0.00 0.00 32.91 2.73
2670 3368 0.716591 TGGAGTGGGACCTCATACCT 59.283 55.000 0.00 0.00 32.91 3.08
2671 3369 1.123928 GGAGTGGGACCTCATACCTG 58.876 60.000 0.00 0.00 32.91 4.00
2672 3370 0.466124 GAGTGGGACCTCATACCTGC 59.534 60.000 0.00 0.00 0.00 4.85
2673 3371 0.043334 AGTGGGACCTCATACCTGCT 59.957 55.000 0.00 0.00 0.00 4.24
2674 3372 0.179000 GTGGGACCTCATACCTGCTG 59.821 60.000 0.00 0.00 0.00 4.41
2675 3373 0.252696 TGGGACCTCATACCTGCTGT 60.253 55.000 0.00 0.00 0.00 4.40
2676 3374 1.007842 TGGGACCTCATACCTGCTGTA 59.992 52.381 0.00 0.00 0.00 2.74
2677 3375 1.689273 GGGACCTCATACCTGCTGTAG 59.311 57.143 0.00 0.00 31.61 2.74
2678 3376 2.667470 GGACCTCATACCTGCTGTAGA 58.333 52.381 0.00 0.00 31.61 2.59
2679 3377 3.031736 GGACCTCATACCTGCTGTAGAA 58.968 50.000 0.00 0.00 31.61 2.10
2680 3378 3.068873 GGACCTCATACCTGCTGTAGAAG 59.931 52.174 0.00 0.00 31.61 2.85
2681 3379 3.034635 ACCTCATACCTGCTGTAGAAGG 58.965 50.000 4.27 4.27 46.85 3.46
2682 3380 2.224161 CCTCATACCTGCTGTAGAAGGC 60.224 54.545 5.79 0.00 45.26 4.35
2683 3381 1.762957 TCATACCTGCTGTAGAAGGCC 59.237 52.381 5.79 0.00 45.26 5.19
2684 3382 1.765314 CATACCTGCTGTAGAAGGCCT 59.235 52.381 0.00 0.00 45.26 5.19
2685 3383 1.195115 TACCTGCTGTAGAAGGCCTG 58.805 55.000 5.69 0.00 45.26 4.85
2686 3384 1.222936 CCTGCTGTAGAAGGCCTGG 59.777 63.158 5.69 0.00 33.21 4.45
2687 3385 1.222936 CTGCTGTAGAAGGCCTGGG 59.777 63.158 5.69 0.00 0.00 4.45
2688 3386 1.538876 TGCTGTAGAAGGCCTGGGT 60.539 57.895 5.69 0.00 0.00 4.51
2689 3387 1.078143 GCTGTAGAAGGCCTGGGTG 60.078 63.158 5.69 0.00 0.00 4.61
2690 3388 1.604378 CTGTAGAAGGCCTGGGTGG 59.396 63.158 5.69 0.00 39.35 4.61
2782 3480 6.615088 AGCATTTTGATGTCTTGTGTCATAC 58.385 36.000 0.00 0.00 0.00 2.39
2844 3544 6.264518 GTGGTAGTTTCCTTTTTCTGGATGAA 59.735 38.462 0.00 0.00 33.09 2.57
2849 3549 8.940397 AGTTTCCTTTTTCTGGATGAATAGAA 57.060 30.769 0.00 0.00 34.24 2.10
2850 3550 9.539194 AGTTTCCTTTTTCTGGATGAATAGAAT 57.461 29.630 0.00 0.00 33.34 2.40
2853 3553 9.632638 TTCCTTTTTCTGGATGAATAGAATAGG 57.367 33.333 0.00 0.00 36.94 2.57
2937 3643 9.360093 CTATAGCTATAGGAAGTATTGTGCAAC 57.640 37.037 26.87 0.00 33.63 4.17
2965 3750 7.223971 CACAGTTGCAACTAAACTACTGAAGTA 59.776 37.037 30.67 0.00 40.58 2.24
3002 4256 8.755696 TGTACATGAACTAATTGCCATTTTTC 57.244 30.769 0.00 0.00 0.00 2.29
3004 4258 7.894376 ACATGAACTAATTGCCATTTTTCTG 57.106 32.000 0.00 0.00 0.00 3.02
3072 4335 9.900112 AGGGTTGATAGGAGTTAATATTCTACT 57.100 33.333 0.00 0.00 0.00 2.57
3080 4343 6.897706 GAGTTAATATTCTACTCCCTCCGT 57.102 41.667 15.08 0.00 33.77 4.69
3081 4344 7.287512 GAGTTAATATTCTACTCCCTCCGTT 57.712 40.000 15.08 0.00 33.77 4.44
3082 4345 7.287512 AGTTAATATTCTACTCCCTCCGTTC 57.712 40.000 0.00 0.00 0.00 3.95
3083 4346 6.267242 AGTTAATATTCTACTCCCTCCGTTCC 59.733 42.308 0.00 0.00 0.00 3.62
3084 4347 1.790818 ATTCTACTCCCTCCGTTCCC 58.209 55.000 0.00 0.00 0.00 3.97
3085 4348 0.682209 TTCTACTCCCTCCGTTCCCG 60.682 60.000 0.00 0.00 0.00 5.14
3086 4349 1.077212 CTACTCCCTCCGTTCCCGA 60.077 63.158 0.00 0.00 35.63 5.14
3087 4350 0.682209 CTACTCCCTCCGTTCCCGAA 60.682 60.000 0.00 0.00 35.63 4.30
3088 4351 0.032813 TACTCCCTCCGTTCCCGAAT 60.033 55.000 0.00 0.00 35.63 3.34
3089 4352 0.032813 ACTCCCTCCGTTCCCGAATA 60.033 55.000 0.00 0.00 35.63 1.75
3090 4353 1.339097 CTCCCTCCGTTCCCGAATAT 58.661 55.000 0.00 0.00 35.63 1.28
3091 4354 2.158415 ACTCCCTCCGTTCCCGAATATA 60.158 50.000 0.00 0.00 35.63 0.86
3092 4355 2.895404 CTCCCTCCGTTCCCGAATATAA 59.105 50.000 0.00 0.00 35.63 0.98
3093 4356 2.895404 TCCCTCCGTTCCCGAATATAAG 59.105 50.000 0.00 0.00 35.63 1.73
3094 4357 2.895404 CCCTCCGTTCCCGAATATAAGA 59.105 50.000 0.00 0.00 35.63 2.10
3095 4358 3.305881 CCCTCCGTTCCCGAATATAAGAC 60.306 52.174 0.00 0.00 35.63 3.01
3096 4359 3.305881 CCTCCGTTCCCGAATATAAGACC 60.306 52.174 0.00 0.00 35.63 3.85
3097 4360 3.569491 TCCGTTCCCGAATATAAGACCT 58.431 45.455 0.00 0.00 35.63 3.85
3098 4361 3.962718 TCCGTTCCCGAATATAAGACCTT 59.037 43.478 0.00 0.00 35.63 3.50
3099 4362 4.406649 TCCGTTCCCGAATATAAGACCTTT 59.593 41.667 0.00 0.00 35.63 3.11
3100 4363 5.104817 TCCGTTCCCGAATATAAGACCTTTT 60.105 40.000 0.00 0.00 35.63 2.27
3101 4364 6.098124 TCCGTTCCCGAATATAAGACCTTTTA 59.902 38.462 0.00 0.00 35.63 1.52
3102 4365 6.762661 CCGTTCCCGAATATAAGACCTTTTAA 59.237 38.462 0.00 0.00 35.63 1.52
3103 4366 7.254556 CCGTTCCCGAATATAAGACCTTTTAAC 60.255 40.741 0.00 0.00 35.63 2.01
3104 4367 7.493645 CGTTCCCGAATATAAGACCTTTTAACT 59.506 37.037 0.00 0.00 35.63 2.24
3105 4368 9.822185 GTTCCCGAATATAAGACCTTTTAACTA 57.178 33.333 0.00 0.00 0.00 2.24
3163 4426 9.944376 AGTGAACATACATACTAAAATGTGTCT 57.056 29.630 0.00 0.00 40.29 3.41
3182 4445 8.596271 TGTGTCTAACATACGAATCAAGAAAA 57.404 30.769 0.00 0.00 32.36 2.29
3183 4446 9.047371 TGTGTCTAACATACGAATCAAGAAAAA 57.953 29.630 0.00 0.00 32.36 1.94
3184 4447 9.530129 GTGTCTAACATACGAATCAAGAAAAAG 57.470 33.333 0.00 0.00 0.00 2.27
3185 4448 8.227791 TGTCTAACATACGAATCAAGAAAAAGC 58.772 33.333 0.00 0.00 0.00 3.51
3186 4449 8.443937 GTCTAACATACGAATCAAGAAAAAGCT 58.556 33.333 0.00 0.00 0.00 3.74
3187 4450 9.647797 TCTAACATACGAATCAAGAAAAAGCTA 57.352 29.630 0.00 0.00 0.00 3.32
3190 4453 9.959749 AACATACGAATCAAGAAAAAGCTAAAA 57.040 25.926 0.00 0.00 0.00 1.52
3191 4454 9.612620 ACATACGAATCAAGAAAAAGCTAAAAG 57.387 29.630 0.00 0.00 0.00 2.27
3192 4455 9.065871 CATACGAATCAAGAAAAAGCTAAAAGG 57.934 33.333 0.00 0.00 0.00 3.11
3193 4456 7.039313 ACGAATCAAGAAAAAGCTAAAAGGT 57.961 32.000 0.00 0.00 0.00 3.50
3194 4457 7.139392 ACGAATCAAGAAAAAGCTAAAAGGTC 58.861 34.615 0.00 0.00 0.00 3.85
3195 4458 7.013369 ACGAATCAAGAAAAAGCTAAAAGGTCT 59.987 33.333 0.00 0.00 0.00 3.85
3196 4459 7.862873 CGAATCAAGAAAAAGCTAAAAGGTCTT 59.137 33.333 0.00 0.00 0.00 3.01
3210 4473 9.232473 GCTAAAAGGTCTTATATTAGGGAATGG 57.768 37.037 0.00 0.00 0.00 3.16
3213 4476 7.575499 AAGGTCTTATATTAGGGAATGGAGG 57.425 40.000 0.00 0.00 0.00 4.30
3214 4477 6.032693 AGGTCTTATATTAGGGAATGGAGGG 58.967 44.000 0.00 0.00 0.00 4.30
3215 4478 6.030082 GGTCTTATATTAGGGAATGGAGGGA 58.970 44.000 0.00 0.00 0.00 4.20
3307 4573 8.726870 TTTGCTAGTGTATAGGTTTATTGGTC 57.273 34.615 0.00 0.00 0.00 4.02
3320 4586 1.250328 ATTGGTCCACATGTGTGCAG 58.750 50.000 23.79 9.14 44.34 4.41
3338 4610 2.222911 GCAGCTGTCTTGAACTTCAGTC 59.777 50.000 16.64 0.00 0.00 3.51
3386 4658 7.143340 CCATTATCCATGTAGTTTTGCATGAG 58.857 38.462 0.00 0.00 46.57 2.90
3394 4666 1.353694 AGTTTTGCATGAGAGGGAGCT 59.646 47.619 0.00 0.00 0.00 4.09
3409 4689 2.354259 GGAGCTTCCAGACATGAACTG 58.646 52.381 0.00 8.62 36.28 3.16
3466 4809 8.211116 TCGTTTACAGATTCAGGTTTTAACAA 57.789 30.769 0.00 0.00 0.00 2.83
3523 4867 8.284945 TGCTATTCTTATCATTTTGCTGTTCT 57.715 30.769 0.00 0.00 0.00 3.01
3529 4873 8.578308 TCTTATCATTTTGCTGTTCTTGTTTG 57.422 30.769 0.00 0.00 0.00 2.93
3538 4882 4.461081 TGCTGTTCTTGTTTGTACCAGTTT 59.539 37.500 0.00 0.00 0.00 2.66
3539 4883 4.798387 GCTGTTCTTGTTTGTACCAGTTTG 59.202 41.667 0.00 0.00 0.00 2.93
3601 4945 4.575885 TGTTACTGAGATAAGCACCAACC 58.424 43.478 0.00 0.00 0.00 3.77
3632 4977 1.135489 CCATGTCTGTGCTGATGTTGC 60.135 52.381 0.00 0.00 0.00 4.17
3662 5012 6.883744 AGGAAAACAAGAACTTATTGGCAAA 58.116 32.000 3.01 0.00 31.76 3.68
3665 5015 7.657354 GGAAAACAAGAACTTATTGGCAAAGAT 59.343 33.333 3.01 0.00 31.76 2.40
3776 5138 8.010697 TGTATAACTTCCTTCTATCCTGGATCA 58.989 37.037 13.54 0.00 0.00 2.92
3828 5190 1.679898 CCTCACTTGACACCTCCCC 59.320 63.158 0.00 0.00 0.00 4.81
3841 5206 2.092914 CACCTCCCCATTCCTTCACTAC 60.093 54.545 0.00 0.00 0.00 2.73
3856 5221 4.067972 TCACTACTGGTTGGTTGAACTC 57.932 45.455 0.00 0.00 34.66 3.01
3857 5222 3.452990 TCACTACTGGTTGGTTGAACTCA 59.547 43.478 0.00 0.00 34.66 3.41
3883 5248 3.119291 GTTCTACAGCATCACCTGATCG 58.881 50.000 0.00 0.00 36.67 3.69
3925 5294 6.690957 TGTATCTAATTTATTTGCTTGCACGC 59.309 34.615 8.48 8.48 0.00 5.34
3953 5322 5.528320 TGTTGGGCTAACACACTTTAGTAAC 59.472 40.000 12.76 0.00 44.07 2.50
3972 5341 6.349300 AGTAACGATCTTGCTTTCCATGTAT 58.651 36.000 0.00 0.00 0.00 2.29
3973 5342 5.490139 AACGATCTTGCTTTCCATGTATG 57.510 39.130 0.00 0.00 0.00 2.39
3974 5343 4.517285 ACGATCTTGCTTTCCATGTATGT 58.483 39.130 0.00 0.00 0.00 2.29
3976 5345 5.163723 ACGATCTTGCTTTCCATGTATGTTG 60.164 40.000 0.00 0.00 0.00 3.33
4133 5547 1.073923 GAGAAGGCCCTGAACCTGAAA 59.926 52.381 0.00 0.00 37.67 2.69
4166 5663 2.221749 CACGTTCACTCTCCAACACATG 59.778 50.000 0.00 0.00 0.00 3.21
4190 5687 5.767168 GGCAGACTATAAGGCTTGATTTGAT 59.233 40.000 10.69 0.00 24.26 2.57
4343 5896 1.742750 GCCGGGATCCTTGAACTGTAC 60.743 57.143 12.58 0.00 0.00 2.90
4390 5945 2.291153 CCTCCTCTTTTTGGCTGGATGA 60.291 50.000 0.00 0.00 0.00 2.92
4444 6005 3.439857 TTGAACAGAAGATTCAGGGGG 57.560 47.619 0.00 0.00 37.38 5.40
4460 6021 0.610785 GGGGTTCAAAGGATGCGGAA 60.611 55.000 0.00 0.00 0.00 4.30
4463 6024 1.067846 GGTTCAAAGGATGCGGAAACC 60.068 52.381 0.00 0.00 0.00 3.27
4474 6038 3.985019 TGCGGAAACCAGGATAGTAAA 57.015 42.857 0.00 0.00 0.00 2.01
4510 6084 3.451141 TTTTTCCTTGCGTGCAAAGAT 57.549 38.095 8.80 0.00 35.33 2.40
4537 6111 1.678970 ATTTCGCCACTGCCCCTTC 60.679 57.895 0.00 0.00 0.00 3.46
4538 6112 2.424842 ATTTCGCCACTGCCCCTTCA 62.425 55.000 0.00 0.00 0.00 3.02
4540 6114 2.597217 CGCCACTGCCCCTTCAAA 60.597 61.111 0.00 0.00 0.00 2.69
4570 6144 4.905429 TGCAGTAGTGTTCCATGTTATGT 58.095 39.130 0.00 0.00 0.00 2.29
4619 6193 5.997746 TGGATTTGCCATTCTAGTAGTATGC 59.002 40.000 10.47 7.45 43.33 3.14
4626 6200 9.627123 TTGCCATTCTAGTAGTATGCTTTTATT 57.373 29.630 10.47 0.00 29.76 1.40
4646 6220 0.533531 TGCAGTGGAGCTGTGACTTG 60.534 55.000 0.00 0.00 46.64 3.16
4652 6228 0.685097 GGAGCTGTGACTTGGTGGTA 59.315 55.000 0.00 0.00 0.00 3.25
4653 6229 1.608283 GGAGCTGTGACTTGGTGGTAC 60.608 57.143 0.00 0.00 0.00 3.34
4657 6233 0.759812 TGTGACTTGGTGGTACCCGA 60.760 55.000 10.07 0.00 37.50 5.14
4658 6234 0.393820 GTGACTTGGTGGTACCCGAA 59.606 55.000 10.07 3.69 37.50 4.30
4668 6244 0.108520 GGTACCCGAATCAGCGTTCA 60.109 55.000 0.00 0.00 0.00 3.18
4673 6249 0.572590 CCGAATCAGCGTTCATCGAC 59.427 55.000 0.00 0.00 42.86 4.20
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 4.553678 TGGAGGTAATACCCTACTTCCTG 58.446 47.826 13.63 0.00 44.50 3.86
1 2 4.913154 TGGAGGTAATACCCTACTTCCT 57.087 45.455 13.63 0.00 44.50 3.36
2 3 6.559429 TCTATGGAGGTAATACCCTACTTCC 58.441 44.000 5.71 6.77 44.47 3.46
3 4 7.468496 TCTCTATGGAGGTAATACCCTACTTC 58.532 42.308 5.71 0.00 39.75 3.01
4 5 7.417811 TCTCTATGGAGGTAATACCCTACTT 57.582 40.000 5.71 0.00 39.75 2.24
5 6 6.011451 CCTCTCTATGGAGGTAATACCCTACT 60.011 46.154 5.71 0.00 45.65 2.57
6 7 6.189133 CCTCTCTATGGAGGTAATACCCTAC 58.811 48.000 5.71 0.00 45.65 3.18
7 8 6.404426 CCTCTCTATGGAGGTAATACCCTA 57.596 45.833 5.71 0.00 45.65 3.53
8 9 5.278127 CCTCTCTATGGAGGTAATACCCT 57.722 47.826 5.71 0.00 45.65 4.34
18 19 0.470080 TTCGGGCCCTCTCTATGGAG 60.470 60.000 22.43 0.00 40.73 3.86
19 20 0.759436 GTTCGGGCCCTCTCTATGGA 60.759 60.000 22.43 3.53 0.00 3.41
20 21 1.749033 GTTCGGGCCCTCTCTATGG 59.251 63.158 22.43 0.54 0.00 2.74
21 22 1.749033 GGTTCGGGCCCTCTCTATG 59.251 63.158 22.43 1.43 0.00 2.23
22 23 1.459730 GGGTTCGGGCCCTCTCTAT 60.460 63.158 22.43 0.00 45.22 1.98
23 24 2.042230 GGGTTCGGGCCCTCTCTA 60.042 66.667 22.43 0.00 45.22 2.43
30 31 1.676635 GTTTACCTGGGTTCGGGCC 60.677 63.158 0.00 0.00 43.29 5.80
31 32 0.323087 ATGTTTACCTGGGTTCGGGC 60.323 55.000 0.00 0.00 43.29 6.13
32 33 1.746470 GATGTTTACCTGGGTTCGGG 58.254 55.000 0.00 0.00 45.02 5.14
33 34 1.338389 ACGATGTTTACCTGGGTTCGG 60.338 52.381 13.11 0.00 30.52 4.30
34 35 1.730064 CACGATGTTTACCTGGGTTCG 59.270 52.381 0.00 8.63 31.96 3.95
35 36 2.740447 GACACGATGTTTACCTGGGTTC 59.260 50.000 0.00 0.00 0.00 3.62
36 37 2.370849 AGACACGATGTTTACCTGGGTT 59.629 45.455 0.00 0.00 0.00 4.11
37 38 1.975680 AGACACGATGTTTACCTGGGT 59.024 47.619 0.00 0.00 0.00 4.51
38 39 2.618053 GAGACACGATGTTTACCTGGG 58.382 52.381 0.00 0.00 0.00 4.45
39 40 2.618053 GGAGACACGATGTTTACCTGG 58.382 52.381 0.00 0.00 0.00 4.45
40 41 2.618053 GGGAGACACGATGTTTACCTG 58.382 52.381 0.00 0.00 32.94 4.00
41 42 1.203994 CGGGAGACACGATGTTTACCT 59.796 52.381 7.85 0.00 33.50 3.08
42 43 1.636988 CGGGAGACACGATGTTTACC 58.363 55.000 0.00 0.00 32.38 2.85
43 44 0.997196 GCGGGAGACACGATGTTTAC 59.003 55.000 0.00 0.00 0.00 2.01
44 45 0.108520 GGCGGGAGACACGATGTTTA 60.109 55.000 0.00 0.00 38.26 2.01
45 46 1.375523 GGCGGGAGACACGATGTTT 60.376 57.895 0.00 0.00 38.26 2.83
46 47 2.227089 GAGGCGGGAGACACGATGTT 62.227 60.000 0.00 0.00 44.00 2.71
47 48 2.680352 AGGCGGGAGACACGATGT 60.680 61.111 0.00 0.00 44.00 3.06
48 49 2.105128 GAGGCGGGAGACACGATG 59.895 66.667 0.00 0.00 44.00 3.84
49 50 3.148279 GGAGGCGGGAGACACGAT 61.148 66.667 0.00 0.00 44.00 3.73
50 51 4.361971 AGGAGGCGGGAGACACGA 62.362 66.667 0.00 0.00 44.00 4.35
51 52 4.135153 CAGGAGGCGGGAGACACG 62.135 72.222 0.00 0.00 44.00 4.49
52 53 1.255667 TAACAGGAGGCGGGAGACAC 61.256 60.000 0.00 0.00 44.00 3.67
53 54 1.077805 TAACAGGAGGCGGGAGACA 59.922 57.895 0.00 0.00 44.00 3.41
54 55 1.516423 GTAACAGGAGGCGGGAGAC 59.484 63.158 0.00 0.00 39.17 3.36
55 56 1.684734 GGTAACAGGAGGCGGGAGA 60.685 63.158 0.00 0.00 0.00 3.71
56 57 1.987855 TGGTAACAGGAGGCGGGAG 60.988 63.158 0.00 0.00 46.17 4.30
57 58 2.120940 TGGTAACAGGAGGCGGGA 59.879 61.111 0.00 0.00 46.17 5.14
68 69 3.554731 GTGCGTCTAAGGCTAATGGTAAC 59.445 47.826 0.00 0.00 0.00 2.50
69 70 3.196039 TGTGCGTCTAAGGCTAATGGTAA 59.804 43.478 0.00 0.00 0.00 2.85
70 71 2.761767 TGTGCGTCTAAGGCTAATGGTA 59.238 45.455 0.00 0.00 0.00 3.25
71 72 1.553248 TGTGCGTCTAAGGCTAATGGT 59.447 47.619 0.00 0.00 0.00 3.55
72 73 2.205074 CTGTGCGTCTAAGGCTAATGG 58.795 52.381 0.00 0.00 0.00 3.16
73 74 2.893637 ACTGTGCGTCTAAGGCTAATG 58.106 47.619 0.00 0.00 0.00 1.90
74 75 3.522553 GAACTGTGCGTCTAAGGCTAAT 58.477 45.455 0.00 0.00 0.00 1.73
75 76 2.670229 CGAACTGTGCGTCTAAGGCTAA 60.670 50.000 0.00 0.00 0.00 3.09
76 77 1.135489 CGAACTGTGCGTCTAAGGCTA 60.135 52.381 0.00 0.00 0.00 3.93
77 78 0.388649 CGAACTGTGCGTCTAAGGCT 60.389 55.000 0.00 0.00 0.00 4.58
78 79 1.352156 CCGAACTGTGCGTCTAAGGC 61.352 60.000 7.51 0.00 0.00 4.35
79 80 0.736325 CCCGAACTGTGCGTCTAAGG 60.736 60.000 7.51 0.00 0.00 2.69
80 81 0.242825 TCCCGAACTGTGCGTCTAAG 59.757 55.000 7.51 0.00 0.00 2.18
81 82 0.038892 GTCCCGAACTGTGCGTCTAA 60.039 55.000 7.51 0.00 0.00 2.10
82 83 1.582968 GTCCCGAACTGTGCGTCTA 59.417 57.895 7.51 0.00 0.00 2.59
83 84 2.338984 GTCCCGAACTGTGCGTCT 59.661 61.111 7.51 0.00 0.00 4.18
84 85 2.737376 GGTCCCGAACTGTGCGTC 60.737 66.667 7.51 0.00 0.00 5.19
85 86 4.309950 GGGTCCCGAACTGTGCGT 62.310 66.667 7.51 0.00 0.00 5.24
87 88 4.717313 GGGGGTCCCGAACTGTGC 62.717 72.222 0.48 0.00 36.85 4.57
96 97 3.097429 ATCTCGGGTAGGGGGTCCC 62.097 68.421 0.00 0.00 45.90 4.46
97 98 1.533513 GATCTCGGGTAGGGGGTCC 60.534 68.421 0.00 0.00 0.00 4.46
98 99 1.533513 GGATCTCGGGTAGGGGGTC 60.534 68.421 0.00 0.00 0.00 4.46
99 100 2.613421 GGATCTCGGGTAGGGGGT 59.387 66.667 0.00 0.00 0.00 4.95
100 101 2.600769 CGGATCTCGGGTAGGGGG 60.601 72.222 0.00 0.00 34.75 5.40
101 102 3.303928 GCGGATCTCGGGTAGGGG 61.304 72.222 5.87 0.00 39.69 4.79
102 103 3.303928 GGCGGATCTCGGGTAGGG 61.304 72.222 5.87 0.00 39.69 3.53
103 104 3.671411 CGGCGGATCTCGGGTAGG 61.671 72.222 0.00 0.00 39.69 3.18
104 105 3.671411 CCGGCGGATCTCGGGTAG 61.671 72.222 24.41 0.00 42.32 3.18
109 110 2.278857 CAAGACCGGCGGATCTCG 60.279 66.667 35.78 16.93 42.76 4.04
110 111 1.227002 GTCAAGACCGGCGGATCTC 60.227 63.158 35.78 20.36 0.00 2.75
111 112 1.982395 TGTCAAGACCGGCGGATCT 60.982 57.895 35.78 26.57 0.00 2.75
112 113 1.810030 GTGTCAAGACCGGCGGATC 60.810 63.158 35.78 24.77 0.00 3.36
113 114 2.264794 GTGTCAAGACCGGCGGAT 59.735 61.111 35.78 18.29 0.00 4.18
114 115 3.998672 GGTGTCAAGACCGGCGGA 61.999 66.667 35.78 6.54 0.00 5.54
120 121 1.301479 GGGTGTCGGTGTCAAGACC 60.301 63.158 7.11 0.00 36.61 3.85
121 122 1.301479 GGGGTGTCGGTGTCAAGAC 60.301 63.158 3.47 3.47 37.85 3.01
122 123 1.458777 AGGGGTGTCGGTGTCAAGA 60.459 57.895 0.00 0.00 0.00 3.02
123 124 1.004918 GAGGGGTGTCGGTGTCAAG 60.005 63.158 0.00 0.00 0.00 3.02
124 125 2.513259 GGAGGGGTGTCGGTGTCAA 61.513 63.158 0.00 0.00 0.00 3.18
125 126 2.920912 GGAGGGGTGTCGGTGTCA 60.921 66.667 0.00 0.00 0.00 3.58
126 127 4.065281 CGGAGGGGTGTCGGTGTC 62.065 72.222 0.00 0.00 0.00 3.67
127 128 4.928140 ACGGAGGGGTGTCGGTGT 62.928 66.667 0.00 0.00 0.00 4.16
128 129 3.584868 GAACGGAGGGGTGTCGGTG 62.585 68.421 0.00 0.00 30.95 4.94
129 130 3.308705 GAACGGAGGGGTGTCGGT 61.309 66.667 0.00 0.00 0.00 4.69
130 131 4.078516 GGAACGGAGGGGTGTCGG 62.079 72.222 0.00 0.00 0.00 4.79
131 132 3.307906 TGGAACGGAGGGGTGTCG 61.308 66.667 0.00 0.00 0.00 4.35
132 133 2.047213 TTGTGGAACGGAGGGGTGTC 62.047 60.000 0.00 0.00 42.39 3.67
133 134 1.423794 ATTGTGGAACGGAGGGGTGT 61.424 55.000 0.00 0.00 42.39 4.16
134 135 0.960364 CATTGTGGAACGGAGGGGTG 60.960 60.000 0.00 0.00 42.39 4.61
135 136 1.378762 CATTGTGGAACGGAGGGGT 59.621 57.895 0.00 0.00 42.39 4.95
136 137 2.046285 GCATTGTGGAACGGAGGGG 61.046 63.158 0.00 0.00 42.39 4.79
137 138 1.303236 TGCATTGTGGAACGGAGGG 60.303 57.895 0.00 0.00 42.39 4.30
138 139 0.606401 ACTGCATTGTGGAACGGAGG 60.606 55.000 0.00 0.00 42.39 4.30
139 140 0.518636 CACTGCATTGTGGAACGGAG 59.481 55.000 0.00 0.00 42.39 4.63
140 141 0.179032 ACACTGCATTGTGGAACGGA 60.179 50.000 9.14 0.00 42.39 4.69
141 142 1.518325 TACACTGCATTGTGGAACGG 58.482 50.000 19.05 0.00 42.39 4.44
142 143 4.180817 TCTATACACTGCATTGTGGAACG 58.819 43.478 19.05 2.52 42.39 3.95
143 144 7.969536 ATATCTATACACTGCATTGTGGAAC 57.030 36.000 19.05 0.00 41.84 3.62
144 145 8.978874 AAATATCTATACACTGCATTGTGGAA 57.021 30.769 19.05 0.23 41.84 3.53
145 146 8.978874 AAAATATCTATACACTGCATTGTGGA 57.021 30.769 19.05 13.82 41.84 4.02
168 169 4.612712 GCTTGCGTCTGTACTGCATAAAAA 60.613 41.667 0.00 0.00 35.89 1.94
169 170 3.120338 GCTTGCGTCTGTACTGCATAAAA 60.120 43.478 0.00 0.00 35.89 1.52
170 171 2.415168 GCTTGCGTCTGTACTGCATAAA 59.585 45.455 0.00 0.00 35.89 1.40
171 172 1.999735 GCTTGCGTCTGTACTGCATAA 59.000 47.619 0.00 0.00 35.89 1.90
172 173 1.204704 AGCTTGCGTCTGTACTGCATA 59.795 47.619 0.00 0.00 35.89 3.14
173 174 0.036952 AGCTTGCGTCTGTACTGCAT 60.037 50.000 0.00 0.00 35.89 3.96
174 175 0.667487 GAGCTTGCGTCTGTACTGCA 60.667 55.000 0.00 0.00 34.75 4.41
175 176 0.667487 TGAGCTTGCGTCTGTACTGC 60.667 55.000 0.00 0.00 0.00 4.40
204 207 3.742327 CGTTCATAGGGATGAGTGCATGT 60.742 47.826 0.00 0.00 43.03 3.21
208 211 1.221414 GCGTTCATAGGGATGAGTGC 58.779 55.000 0.00 0.00 43.03 4.40
215 218 0.389296 CGTGTGTGCGTTCATAGGGA 60.389 55.000 0.00 0.00 0.00 4.20
244 247 3.960755 TCTTTCGAAGATGCTCATAGGGA 59.039 43.478 0.00 0.00 35.04 4.20
256 259 1.068472 GTCGGCTCTGTCTTTCGAAGA 60.068 52.381 0.00 0.00 34.51 2.87
268 271 8.682936 AAATTTTAAGATGATATGTCGGCTCT 57.317 30.769 0.00 0.00 0.00 4.09
279 282 8.388103 CGGTGACTTCGTAAATTTTAAGATGAT 58.612 33.333 18.20 8.01 0.00 2.45
287 290 4.152938 GCCTACGGTGACTTCGTAAATTTT 59.847 41.667 0.00 0.00 41.62 1.82
327 330 0.680061 GTCAGTGGGAGGAGACGTTT 59.320 55.000 0.00 0.00 0.00 3.60
331 334 1.594310 GCAGTCAGTGGGAGGAGAC 59.406 63.158 0.00 0.00 0.00 3.36
343 346 0.667453 TTTTCAGCATTGCGCAGTCA 59.333 45.000 11.31 0.00 46.13 3.41
346 349 1.135199 AGGATTTTCAGCATTGCGCAG 60.135 47.619 11.31 0.00 46.13 5.18
350 353 7.599630 TTTATTTCAGGATTTTCAGCATTGC 57.400 32.000 0.00 0.00 0.00 3.56
353 356 9.595823 CTTGATTTATTTCAGGATTTTCAGCAT 57.404 29.630 0.00 0.00 0.00 3.79
354 357 8.036575 CCTTGATTTATTTCAGGATTTTCAGCA 58.963 33.333 0.00 0.00 0.00 4.41
367 370 8.694394 GCTCGCATTTATTCCTTGATTTATTTC 58.306 33.333 0.00 0.00 0.00 2.17
377 380 2.684881 CTGGTGCTCGCATTTATTCCTT 59.315 45.455 0.00 0.00 0.00 3.36
393 396 2.297033 CCCACAGGTTCAAATTCTGGTG 59.703 50.000 0.00 0.00 33.19 4.17
399 402 2.557452 CCCTAGCCCACAGGTTCAAATT 60.557 50.000 0.00 0.00 34.57 1.82
401 404 0.404040 CCCTAGCCCACAGGTTCAAA 59.596 55.000 0.00 0.00 34.57 2.69
409 412 2.925078 GTGGTATCCCTAGCCCACA 58.075 57.895 0.00 0.00 45.34 4.17
417 422 1.005569 TCGAGTGACTGTGGTATCCCT 59.994 52.381 0.00 0.00 0.00 4.20
432 437 1.273606 CTGTGACTGGATGGTTCGAGT 59.726 52.381 0.00 0.00 42.83 4.18
436 441 2.154462 CAACCTGTGACTGGATGGTTC 58.846 52.381 15.78 0.00 38.76 3.62
446 451 1.131126 CCATGCGAATCAACCTGTGAC 59.869 52.381 0.00 0.00 39.72 3.67
447 452 1.452110 CCATGCGAATCAACCTGTGA 58.548 50.000 0.00 0.00 41.67 3.58
582 587 2.947652 TCGGACGGAAGGAGTACAATAG 59.052 50.000 0.00 0.00 0.00 1.73
594 599 1.335496 CCAAAGCTTTTTCGGACGGAA 59.665 47.619 9.53 0.00 0.00 4.30
597 623 0.663269 GGCCAAAGCTTTTTCGGACG 60.663 55.000 16.19 1.42 39.73 4.79
602 628 2.174363 AGCATGGCCAAAGCTTTTTC 57.826 45.000 25.49 3.91 39.73 2.29
632 658 2.529780 TACTTGCTCCGTCCGAAAAA 57.470 45.000 0.00 0.00 0.00 1.94
633 659 2.754946 ATACTTGCTCCGTCCGAAAA 57.245 45.000 0.00 0.00 0.00 2.29
634 660 5.717078 ATATATACTTGCTCCGTCCGAAA 57.283 39.130 0.00 0.00 0.00 3.46
635 661 5.717078 AATATATACTTGCTCCGTCCGAA 57.283 39.130 0.00 0.00 0.00 4.30
636 662 5.466819 CAAATATATACTTGCTCCGTCCGA 58.533 41.667 0.00 0.00 0.00 4.55
637 663 4.625742 CCAAATATATACTTGCTCCGTCCG 59.374 45.833 0.00 0.00 0.00 4.79
638 664 5.548406 ACCAAATATATACTTGCTCCGTCC 58.452 41.667 0.00 0.00 0.00 4.79
639 665 8.656849 CAATACCAAATATATACTTGCTCCGTC 58.343 37.037 0.00 0.00 0.00 4.79
640 666 8.154856 ACAATACCAAATATATACTTGCTCCGT 58.845 33.333 0.00 0.00 0.00 4.69
641 667 8.547967 ACAATACCAAATATATACTTGCTCCG 57.452 34.615 0.00 0.00 0.00 4.63
709 735 9.697250 CGTAGTGCATATAAATTTTCTCGAAAA 57.303 29.630 7.22 7.22 43.48 2.29
712 738 7.997107 ACGTAGTGCATATAAATTTTCTCGA 57.003 32.000 0.00 0.00 42.51 4.04
722 748 6.717997 TCCTCCTCATAACGTAGTGCATATAA 59.282 38.462 0.00 0.00 45.00 0.98
746 779 0.243907 TTGCTACGCCTGAGTGAGTC 59.756 55.000 0.00 0.00 0.00 3.36
747 780 0.679505 TTTGCTACGCCTGAGTGAGT 59.320 50.000 0.00 0.00 0.00 3.41
751 784 1.812571 CCATTTTTGCTACGCCTGAGT 59.187 47.619 0.00 0.00 0.00 3.41
752 785 1.133025 CCCATTTTTGCTACGCCTGAG 59.867 52.381 0.00 0.00 0.00 3.35
754 787 1.173043 TCCCATTTTTGCTACGCCTG 58.827 50.000 0.00 0.00 0.00 4.85
758 791 4.513198 TTCCTTTCCCATTTTTGCTACG 57.487 40.909 0.00 0.00 0.00 3.51
760 793 4.346418 TGCTTTCCTTTCCCATTTTTGCTA 59.654 37.500 0.00 0.00 0.00 3.49
822 855 2.969990 TCTCAATTCTCTGCAGTCTGC 58.030 47.619 18.32 18.32 45.29 4.26
823 856 4.201832 GCATTCTCAATTCTCTGCAGTCTG 60.202 45.833 14.67 5.73 0.00 3.51
830 863 6.537660 TGTACATCTGCATTCTCAATTCTCTG 59.462 38.462 0.00 0.00 0.00 3.35
843 876 1.915489 TCCCCACTTGTACATCTGCAT 59.085 47.619 0.00 0.00 0.00 3.96
855 888 0.250513 GCTCAGATTCGTCCCCACTT 59.749 55.000 0.00 0.00 0.00 3.16
967 1015 4.653888 AGGGGTTTGGCCGTTCGG 62.654 66.667 6.90 6.90 38.44 4.30
968 1016 3.361977 CAGGGGTTTGGCCGTTCG 61.362 66.667 0.00 0.00 38.44 3.95
969 1017 2.989253 CCAGGGGTTTGGCCGTTC 60.989 66.667 0.00 0.00 38.44 3.95
970 1018 3.802852 GACCAGGGGTTTGGCCGTT 62.803 63.158 0.00 0.00 42.18 4.44
971 1019 4.280019 GACCAGGGGTTTGGCCGT 62.280 66.667 0.00 0.00 42.18 5.68
1135 1663 2.011856 GAGTCGTCGTCGTCGGAGAG 62.012 65.000 11.74 0.00 36.95 3.20
1802 2343 4.776322 CCCAGCCCGAACGCATCA 62.776 66.667 0.00 0.00 0.00 3.07
1857 2398 0.041238 ATCTCCTCCACCTCGGTTGA 59.959 55.000 0.00 0.00 35.57 3.18
1975 2516 8.506437 CAATTTTACTACAGAAGCACATCAAGA 58.494 33.333 0.00 0.00 0.00 3.02
1988 2529 8.280909 ACGCAAACAAATCAATTTTACTACAG 57.719 30.769 0.00 0.00 0.00 2.74
1992 2533 6.512297 AGGACGCAAACAAATCAATTTTACT 58.488 32.000 0.00 0.00 0.00 2.24
2061 2605 3.492011 CACTTGCAAAATGCTGTTTCCTC 59.508 43.478 0.00 0.00 45.31 3.71
2063 2607 3.456280 TCACTTGCAAAATGCTGTTTCC 58.544 40.909 0.00 0.00 45.31 3.13
2082 2626 5.648178 AATATGTGCACAAGATTGCTTCA 57.352 34.783 25.72 0.00 43.41 3.02
2091 2635 3.684305 TCCGACTCAAATATGTGCACAAG 59.316 43.478 25.72 17.59 0.00 3.16
2130 2674 2.783135 TCCAGAGTGCCAACTGAAATC 58.217 47.619 0.00 0.00 36.52 2.17
2135 2679 5.028549 AGTTATATCCAGAGTGCCAACTG 57.971 43.478 0.00 0.00 36.52 3.16
2165 2716 4.911390 AGGGGAGTCAAGTCTTTACAATG 58.089 43.478 0.00 0.00 0.00 2.82
2171 2722 5.243954 GCATTTAAAGGGGAGTCAAGTCTTT 59.756 40.000 1.57 0.00 0.00 2.52
2259 2874 1.546923 TGTTCAAATCAGCATGCCCTG 59.453 47.619 15.66 7.41 34.76 4.45
2274 2889 0.250727 GTAGTTGGCCCTGCTGTTCA 60.251 55.000 0.00 0.00 0.00 3.18
2298 2922 1.370900 CACGCAGCAAGAAGTTGGC 60.371 57.895 0.00 0.00 33.87 4.52
2327 2951 8.324306 ACTGAATAAGATCTGATTCAAACAGGA 58.676 33.333 28.19 10.50 40.58 3.86
2352 2976 7.689446 AATAAGAAGCAAGGGTTTTCTCTAC 57.311 36.000 0.00 0.00 31.16 2.59
2396 3025 7.041107 ACAAACAAATGCTACATTGTTCAACT 58.959 30.769 4.56 0.00 46.09 3.16
2456 3092 1.354031 ACGGGCCATGGATATGCAATA 59.646 47.619 18.40 0.00 32.79 1.90
2563 3261 9.730705 AATTTTGTTGAAGAGAGAGATGACATA 57.269 29.630 0.00 0.00 0.00 2.29
2629 3327 3.118665 ACCACTTTCACATTTTGCAGCTT 60.119 39.130 0.00 0.00 0.00 3.74
2652 3350 1.123928 CAGGTATGAGGTCCCACTCC 58.876 60.000 0.00 0.00 36.66 3.85
2667 3365 1.557269 CCAGGCCTTCTACAGCAGGT 61.557 60.000 0.00 0.00 30.80 4.00
2668 3366 1.222936 CCAGGCCTTCTACAGCAGG 59.777 63.158 0.00 0.00 0.00 4.85
2669 3367 1.222936 CCCAGGCCTTCTACAGCAG 59.777 63.158 0.00 0.00 0.00 4.24
2670 3368 1.538876 ACCCAGGCCTTCTACAGCA 60.539 57.895 0.00 0.00 0.00 4.41
2671 3369 1.078143 CACCCAGGCCTTCTACAGC 60.078 63.158 0.00 0.00 0.00 4.40
2672 3370 1.604378 CCACCCAGGCCTTCTACAG 59.396 63.158 0.00 0.00 0.00 2.74
2673 3371 3.820425 CCACCCAGGCCTTCTACA 58.180 61.111 0.00 0.00 0.00 2.74
2682 3380 2.034687 CTCACTTGGCCACCCAGG 59.965 66.667 3.88 0.00 43.37 4.45
2683 3381 1.151450 AACTCACTTGGCCACCCAG 59.849 57.895 3.88 2.21 43.37 4.45
2684 3382 1.152777 CAACTCACTTGGCCACCCA 60.153 57.895 3.88 0.00 40.06 4.51
2685 3383 1.903404 CCAACTCACTTGGCCACCC 60.903 63.158 3.88 0.00 43.37 4.61
2686 3384 3.763671 CCAACTCACTTGGCCACC 58.236 61.111 3.88 0.00 43.37 4.61
2692 3390 4.264460 AGCTACTTCTCCAACTCACTTG 57.736 45.455 0.00 0.00 0.00 3.16
2782 3480 5.868043 TGATAGCTCAAACTGTCACATTG 57.132 39.130 0.00 0.00 33.44 2.82
2814 3512 5.748630 CAGAAAAAGGAAACTACCACTTTGC 59.251 40.000 0.00 0.00 42.68 3.68
2849 3549 8.599792 ACATGTAACTAAAGTGTTACCACCTAT 58.400 33.333 0.00 0.37 46.84 2.57
2850 3550 7.965718 ACATGTAACTAAAGTGTTACCACCTA 58.034 34.615 0.00 0.00 46.84 3.08
2851 3551 6.834107 ACATGTAACTAAAGTGTTACCACCT 58.166 36.000 0.00 0.00 46.84 4.00
2852 3552 7.656948 TGTACATGTAACTAAAGTGTTACCACC 59.343 37.037 7.25 0.00 46.84 4.61
2853 3553 8.592105 TGTACATGTAACTAAAGTGTTACCAC 57.408 34.615 7.25 7.78 46.84 4.16
2982 3767 7.095102 GCAACAGAAAAATGGCAATTAGTTCAT 60.095 33.333 11.06 0.00 0.00 2.57
3002 4256 3.996150 AACCATTTCAGTCAGCAACAG 57.004 42.857 0.00 0.00 0.00 3.16
3004 4258 4.829064 TGTAACCATTTCAGTCAGCAAC 57.171 40.909 0.00 0.00 0.00 4.17
3079 4342 8.728337 AGTTAAAAGGTCTTATATTCGGGAAC 57.272 34.615 0.00 0.00 0.00 3.62
3137 4400 9.944376 AGACACATTTTAGTATGTATGTTCACT 57.056 29.630 0.00 0.00 36.64 3.41
3150 4413 9.647797 TGATTCGTATGTTAGACACATTTTAGT 57.352 29.630 0.00 0.00 44.40 2.24
3153 4416 9.214957 TCTTGATTCGTATGTTAGACACATTTT 57.785 29.630 0.00 0.00 44.40 1.82
3154 4417 8.771920 TCTTGATTCGTATGTTAGACACATTT 57.228 30.769 0.00 0.00 44.40 2.32
3155 4418 8.771920 TTCTTGATTCGTATGTTAGACACATT 57.228 30.769 0.00 0.00 44.40 2.71
3157 4420 8.596271 TTTTCTTGATTCGTATGTTAGACACA 57.404 30.769 0.00 0.00 40.71 3.72
3158 4421 9.530129 CTTTTTCTTGATTCGTATGTTAGACAC 57.470 33.333 0.00 0.00 0.00 3.67
3159 4422 8.227791 GCTTTTTCTTGATTCGTATGTTAGACA 58.772 33.333 0.00 0.00 0.00 3.41
3160 4423 8.443937 AGCTTTTTCTTGATTCGTATGTTAGAC 58.556 33.333 0.00 0.00 0.00 2.59
3161 4424 8.547967 AGCTTTTTCTTGATTCGTATGTTAGA 57.452 30.769 0.00 0.00 0.00 2.10
3164 4427 9.959749 TTTTAGCTTTTTCTTGATTCGTATGTT 57.040 25.926 0.00 0.00 0.00 2.71
3165 4428 9.612620 CTTTTAGCTTTTTCTTGATTCGTATGT 57.387 29.630 0.00 0.00 0.00 2.29
3166 4429 9.065871 CCTTTTAGCTTTTTCTTGATTCGTATG 57.934 33.333 0.00 0.00 0.00 2.39
3167 4430 8.793592 ACCTTTTAGCTTTTTCTTGATTCGTAT 58.206 29.630 0.00 0.00 0.00 3.06
3168 4431 8.161699 ACCTTTTAGCTTTTTCTTGATTCGTA 57.838 30.769 0.00 0.00 0.00 3.43
3169 4432 7.013369 AGACCTTTTAGCTTTTTCTTGATTCGT 59.987 33.333 0.00 0.00 0.00 3.85
3170 4433 7.363431 AGACCTTTTAGCTTTTTCTTGATTCG 58.637 34.615 0.00 0.00 0.00 3.34
3184 4447 9.232473 CCATTCCCTAATATAAGACCTTTTAGC 57.768 37.037 0.00 0.00 0.00 3.09
3187 4450 8.448816 CCTCCATTCCCTAATATAAGACCTTTT 58.551 37.037 0.00 0.00 0.00 2.27
3188 4451 7.018650 CCCTCCATTCCCTAATATAAGACCTTT 59.981 40.741 0.00 0.00 0.00 3.11
3189 4452 6.505700 CCCTCCATTCCCTAATATAAGACCTT 59.494 42.308 0.00 0.00 0.00 3.50
3190 4453 6.032693 CCCTCCATTCCCTAATATAAGACCT 58.967 44.000 0.00 0.00 0.00 3.85
3191 4454 6.030082 TCCCTCCATTCCCTAATATAAGACC 58.970 44.000 0.00 0.00 0.00 3.85
3192 4455 6.731448 ACTCCCTCCATTCCCTAATATAAGAC 59.269 42.308 0.00 0.00 0.00 3.01
3193 4456 6.886637 ACTCCCTCCATTCCCTAATATAAGA 58.113 40.000 0.00 0.00 0.00 2.10
3194 4457 7.901861 AGTACTCCCTCCATTCCCTAATATAAG 59.098 40.741 0.00 0.00 0.00 1.73
3195 4458 7.786968 AGTACTCCCTCCATTCCCTAATATAA 58.213 38.462 0.00 0.00 0.00 0.98
3196 4459 7.372060 AGTACTCCCTCCATTCCCTAATATA 57.628 40.000 0.00 0.00 0.00 0.86
3197 4460 6.248080 AGTACTCCCTCCATTCCCTAATAT 57.752 41.667 0.00 0.00 0.00 1.28
3198 4461 5.698369 AGTACTCCCTCCATTCCCTAATA 57.302 43.478 0.00 0.00 0.00 0.98
3199 4462 4.578149 AGTACTCCCTCCATTCCCTAAT 57.422 45.455 0.00 0.00 0.00 1.73
3200 4463 4.363546 AAGTACTCCCTCCATTCCCTAA 57.636 45.455 0.00 0.00 0.00 2.69
3201 4464 4.363546 AAAGTACTCCCTCCATTCCCTA 57.636 45.455 0.00 0.00 0.00 3.53
3202 4465 2.972153 AAGTACTCCCTCCATTCCCT 57.028 50.000 0.00 0.00 0.00 4.20
3203 4466 6.954352 ATATAAAGTACTCCCTCCATTCCC 57.046 41.667 0.00 0.00 0.00 3.97
3204 4467 6.655425 GCAATATAAAGTACTCCCTCCATTCC 59.345 42.308 0.00 0.00 0.00 3.01
3205 4468 6.369065 CGCAATATAAAGTACTCCCTCCATTC 59.631 42.308 0.00 0.00 0.00 2.67
3206 4469 6.183361 ACGCAATATAAAGTACTCCCTCCATT 60.183 38.462 0.00 0.00 0.00 3.16
3207 4470 5.307196 ACGCAATATAAAGTACTCCCTCCAT 59.693 40.000 0.00 0.00 0.00 3.41
3208 4471 4.652421 ACGCAATATAAAGTACTCCCTCCA 59.348 41.667 0.00 0.00 0.00 3.86
3209 4472 4.989168 CACGCAATATAAAGTACTCCCTCC 59.011 45.833 0.00 0.00 0.00 4.30
3210 4473 4.448060 GCACGCAATATAAAGTACTCCCTC 59.552 45.833 0.00 0.00 0.00 4.30
3211 4474 4.141801 TGCACGCAATATAAAGTACTCCCT 60.142 41.667 0.00 0.00 0.00 4.20
3212 4475 4.124238 TGCACGCAATATAAAGTACTCCC 58.876 43.478 0.00 0.00 0.00 4.30
3213 4476 5.236478 ACATGCACGCAATATAAAGTACTCC 59.764 40.000 0.00 0.00 0.00 3.85
3214 4477 6.287107 ACATGCACGCAATATAAAGTACTC 57.713 37.500 0.00 0.00 0.00 2.59
3215 4478 6.486248 CAACATGCACGCAATATAAAGTACT 58.514 36.000 0.00 0.00 0.00 2.73
3266 4532 8.478066 ACACTAGCAAAGATCAACAGTATCATA 58.522 33.333 0.00 0.00 0.00 2.15
3267 4533 7.334090 ACACTAGCAAAGATCAACAGTATCAT 58.666 34.615 0.00 0.00 0.00 2.45
3307 4573 0.887836 AGACAGCTGCACACATGTGG 60.888 55.000 28.64 18.29 45.72 4.17
3320 4586 3.462021 ACAGACTGAAGTTCAAGACAGC 58.538 45.455 10.08 0.00 34.25 4.40
3338 4610 8.815141 TGGTTTTTGATATCACATTCAAACAG 57.185 30.769 4.48 0.00 40.51 3.16
3386 4658 1.198713 TCATGTCTGGAAGCTCCCTC 58.801 55.000 0.00 0.00 35.03 4.30
3409 4689 8.723942 AGTACTCAACATAAATGTCTCATTCC 57.276 34.615 0.00 0.00 40.80 3.01
3466 4809 7.923344 CGATGTATCCTGTTAAATCTGAAGACT 59.077 37.037 0.00 0.00 0.00 3.24
3487 4830 9.494271 AATGATAAGAATAGCATACAACGATGT 57.506 29.630 3.12 3.12 37.16 3.06
3523 4867 5.477291 TGAAGGAACAAACTGGTACAAACAA 59.523 36.000 0.00 0.00 38.70 2.83
3529 4873 5.705441 TGATGATGAAGGAACAAACTGGTAC 59.295 40.000 0.00 0.00 0.00 3.34
3538 4882 4.583907 TGCAAAACTGATGATGAAGGAACA 59.416 37.500 0.00 0.00 0.00 3.18
3539 4883 5.125100 TGCAAAACTGATGATGAAGGAAC 57.875 39.130 0.00 0.00 0.00 3.62
3591 4935 4.020128 TGGTAAACAAAAAGGTTGGTGCTT 60.020 37.500 0.00 0.00 0.00 3.91
3601 4945 5.459762 CAGCACAGACATGGTAAACAAAAAG 59.540 40.000 0.00 0.00 0.00 2.27
3632 4977 9.463443 CCAATAAGTTCTTGTTTTCCTACAAAG 57.537 33.333 0.90 0.00 37.55 2.77
3662 5012 4.526650 ACTTCAACCCGGCAATTTTTATCT 59.473 37.500 0.00 0.00 0.00 1.98
3665 5015 5.279056 CCTTACTTCAACCCGGCAATTTTTA 60.279 40.000 0.00 0.00 0.00 1.52
3675 5025 0.323629 TCTGCCCTTACTTCAACCCG 59.676 55.000 0.00 0.00 0.00 5.28
3746 5108 9.090103 CCAGGATAGAAGGAAGTTATACATACA 57.910 37.037 0.00 0.00 0.00 2.29
3749 5111 8.980832 ATCCAGGATAGAAGGAAGTTATACAT 57.019 34.615 0.00 0.00 34.62 2.29
3750 5112 8.010697 TGATCCAGGATAGAAGGAAGTTATACA 58.989 37.037 0.32 0.00 34.62 2.29
3751 5113 8.423906 TGATCCAGGATAGAAGGAAGTTATAC 57.576 38.462 0.32 0.00 34.62 1.47
3752 5114 8.235230 ACTGATCCAGGATAGAAGGAAGTTATA 58.765 37.037 0.32 0.00 35.51 0.98
3753 5115 7.079048 ACTGATCCAGGATAGAAGGAAGTTAT 58.921 38.462 0.32 0.00 35.51 1.89
3776 5138 5.700402 ATGAGTAGCCAAATACCAGAACT 57.300 39.130 0.00 0.00 0.00 3.01
3828 5190 4.021102 ACCAACCAGTAGTGAAGGAATG 57.979 45.455 0.00 0.00 0.00 2.67
3841 5206 3.384467 ACCATTTGAGTTCAACCAACCAG 59.616 43.478 0.00 0.00 35.28 4.00
3856 5221 4.012374 AGGTGATGCTGTAGAACCATTTG 58.988 43.478 0.00 0.00 33.13 2.32
3857 5222 4.012374 CAGGTGATGCTGTAGAACCATTT 58.988 43.478 0.00 0.00 33.13 2.32
3907 5276 2.408032 CACGCGTGCAAGCAAATAAATT 59.592 40.909 28.16 0.00 36.85 1.82
3947 5316 5.730550 ACATGGAAAGCAAGATCGTTACTA 58.269 37.500 0.00 0.00 0.00 1.82
3953 5322 5.065090 TCAACATACATGGAAAGCAAGATCG 59.935 40.000 0.00 0.00 0.00 3.69
3972 5341 8.500753 AATAATTATTCACTAGCGGTTCAACA 57.499 30.769 4.81 0.00 0.00 3.33
4133 5547 5.855045 AGAGTGAACGTGAAGACCTTAAAT 58.145 37.500 0.00 0.00 0.00 1.40
4166 5663 5.126067 TCAAATCAAGCCTTATAGTCTGCC 58.874 41.667 0.00 0.00 0.00 4.85
4190 5687 5.529430 CACAAACACAGGTCACCACTAATAA 59.471 40.000 0.00 0.00 0.00 1.40
4306 5859 0.881118 GGCTTCAAATCTTGCGACCA 59.119 50.000 0.00 0.00 0.00 4.02
4343 5896 0.595095 GCAGGCACTTCAACTCAAGG 59.405 55.000 0.00 0.00 34.60 3.61
4414 5974 9.525409 CTGAATCTTCTGTTCAAAAGAACAAAT 57.475 29.630 11.62 2.33 43.46 2.32
4444 6005 1.611491 TGGTTTCCGCATCCTTTGAAC 59.389 47.619 0.00 0.00 0.00 3.18
4460 6021 5.014755 TGGGTTCACATTTACTATCCTGGTT 59.985 40.000 0.00 0.00 0.00 3.67
4463 6024 5.745227 ACTGGGTTCACATTTACTATCCTG 58.255 41.667 0.00 0.00 0.00 3.86
4501 6070 2.953466 ATGATGCCACATCTTTGCAC 57.047 45.000 8.87 0.00 37.92 4.57
4537 6111 4.494350 ACACTACTGCATTCAGCTTTTG 57.506 40.909 0.00 0.00 44.10 2.44
4538 6112 4.022849 GGAACACTACTGCATTCAGCTTTT 60.023 41.667 0.00 0.00 44.10 2.27
4540 6114 3.077359 GGAACACTACTGCATTCAGCTT 58.923 45.455 0.00 0.00 44.10 3.74
4570 6144 4.365514 TGGACTTGAATCTGCTTAACCA 57.634 40.909 0.00 0.00 0.00 3.67
4614 6188 4.800471 GCTCCACTGCAAATAAAAGCATAC 59.200 41.667 0.00 0.00 40.42 2.39
4615 6189 4.706476 AGCTCCACTGCAAATAAAAGCATA 59.294 37.500 7.81 0.00 40.42 3.14
4616 6190 3.512724 AGCTCCACTGCAAATAAAAGCAT 59.487 39.130 7.81 0.00 40.42 3.79
4618 6192 3.248266 CAGCTCCACTGCAAATAAAAGC 58.752 45.455 0.00 0.00 40.19 3.51
4652 6228 0.806102 CGATGAACGCTGATTCGGGT 60.806 55.000 0.00 0.00 34.51 5.28
4653 6229 0.527600 TCGATGAACGCTGATTCGGG 60.528 55.000 0.00 0.00 42.26 5.14
4657 6233 0.249120 TGGGTCGATGAACGCTGATT 59.751 50.000 0.00 0.00 42.26 2.57
4658 6234 0.465705 ATGGGTCGATGAACGCTGAT 59.534 50.000 0.00 0.00 42.26 2.90


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.