Multiple sequence alignment - TraesCS2B01G351600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G351600 chr2B 100.000 7210 0 0 1 7210 500596188 500588979 0.000000e+00 13315.0
1 TraesCS2B01G351600 chr2B 88.889 459 28 5 4702 5158 99572415 99572852 1.770000e-150 544.0
2 TraesCS2B01G351600 chr2B 97.541 122 3 0 3693 3814 653603137 653603258 7.330000e-50 209.0
3 TraesCS2B01G351600 chr2B 94.697 132 7 0 3250 3381 740744262 740744131 9.480000e-49 206.0
4 TraesCS2B01G351600 chr2B 97.521 121 2 1 3695 3814 788660475 788660355 9.480000e-49 206.0
5 TraesCS2B01G351600 chr2B 93.893 131 8 0 3247 3377 180651796 180651926 1.590000e-46 198.0
6 TraesCS2B01G351600 chr2D 93.387 2480 101 33 4295 6733 425217469 425215012 0.000000e+00 3613.0
7 TraesCS2B01G351600 chr2D 92.847 1426 62 16 1852 3248 425219701 425218287 0.000000e+00 2032.0
8 TraesCS2B01G351600 chr2D 90.076 1179 64 16 699 1852 425220893 425219743 0.000000e+00 1480.0
9 TraesCS2B01G351600 chr2D 84.893 609 70 15 108 704 425221788 425221190 4.820000e-166 595.0
10 TraesCS2B01G351600 chr2D 98.452 323 5 0 3374 3696 425218289 425217967 2.920000e-158 569.0
11 TraesCS2B01G351600 chr2D 88.306 496 29 14 3808 4300 425217970 425217501 1.050000e-157 568.0
12 TraesCS2B01G351600 chr2D 82.825 361 32 17 6860 7210 425213377 425213037 5.470000e-76 296.0
13 TraesCS2B01G351600 chr2D 80.870 230 32 10 279 502 425563178 425562955 3.460000e-38 171.0
14 TraesCS2B01G351600 chr2A 89.906 2873 137 48 283 3079 562979400 562982195 0.000000e+00 3557.0
15 TraesCS2B01G351600 chr2A 91.659 2278 104 34 4295 6516 562983376 562985623 0.000000e+00 3075.0
16 TraesCS2B01G351600 chr2A 96.244 213 7 1 3037 3248 562982250 562982462 1.490000e-91 348.0
17 TraesCS2B01G351600 chr2A 94.472 199 10 1 3853 4051 562982827 562983024 9.090000e-79 305.0
18 TraesCS2B01G351600 chr2A 88.934 244 20 4 4057 4296 562983100 562983340 1.970000e-75 294.0
19 TraesCS2B01G351600 chr2A 96.094 128 4 1 3692 3819 17866226 17866100 2.640000e-49 207.0
20 TraesCS2B01G351600 chr2A 93.846 130 8 0 3250 3379 194169675 194169804 5.710000e-46 196.0
21 TraesCS2B01G351600 chr2A 90.299 134 12 1 6697 6829 562986002 562986135 2.670000e-39 174.0
22 TraesCS2B01G351600 chr2A 91.453 117 10 0 6550 6666 562985890 562986006 2.080000e-35 161.0
23 TraesCS2B01G351600 chr2A 88.189 127 7 5 7089 7209 562986137 562986261 2.100000e-30 145.0
24 TraesCS2B01G351600 chr2A 77.419 248 37 12 324 567 562642508 562642740 5.870000e-26 130.0
25 TraesCS2B01G351600 chr3B 91.105 742 49 8 2512 3247 816799815 816800545 0.000000e+00 989.0
26 TraesCS2B01G351600 chr3B 86.449 428 48 9 3853 4278 816800931 816801350 1.830000e-125 460.0
27 TraesCS2B01G351600 chr3B 87.678 211 21 3 4296 4504 816801401 816801608 2.600000e-59 241.0
28 TraesCS2B01G351600 chr3B 88.060 134 11 5 5656 5787 597089612 597089742 3.480000e-33 154.0
29 TraesCS2B01G351600 chrUn 84.187 449 45 8 4726 5171 32069349 32068924 5.200000e-111 412.0
30 TraesCS2B01G351600 chr7D 96.875 128 3 1 3684 3811 579147031 579147157 5.670000e-51 213.0
31 TraesCS2B01G351600 chr1D 78.674 347 53 16 5451 5784 391862621 391862959 2.040000e-50 211.0
32 TraesCS2B01G351600 chr1D 74.924 327 70 9 274 598 24939586 24939902 9.750000e-29 139.0
33 TraesCS2B01G351600 chr5B 96.800 125 2 2 3692 3814 282391993 282392117 2.640000e-49 207.0
34 TraesCS2B01G351600 chr5B 95.349 129 5 1 3694 3822 658160238 658160365 3.410000e-48 204.0
35 TraesCS2B01G351600 chr3A 94.815 135 4 2 3691 3824 738053066 738053198 2.640000e-49 207.0
36 TraesCS2B01G351600 chr3A 87.313 134 12 5 5656 5787 596515499 596515629 1.620000e-31 148.0
37 TraesCS2B01G351600 chr1B 95.385 130 5 1 3695 3824 395274931 395274803 9.480000e-49 206.0
38 TraesCS2B01G351600 chr1B 95.276 127 6 0 3250 3376 175418453 175418579 1.230000e-47 202.0
39 TraesCS2B01G351600 chr1B 78.000 350 53 19 5449 5784 530779334 530778995 1.590000e-46 198.0
40 TraesCS2B01G351600 chr1B 88.235 153 16 2 3227 3377 572202590 572202438 1.600000e-41 182.0
41 TraesCS2B01G351600 chr1B 74.294 354 78 11 274 624 40364655 40364998 3.510000e-28 137.0
42 TraesCS2B01G351600 chr7B 94.656 131 5 2 3693 3822 535690745 535690874 1.230000e-47 202.0
43 TraesCS2B01G351600 chr7B 91.971 137 10 1 3248 3384 145667408 145667543 2.650000e-44 191.0
44 TraesCS2B01G351600 chr7B 90.845 142 11 2 3235 3376 118126194 118126333 9.550000e-44 189.0
45 TraesCS2B01G351600 chr6B 93.846 130 8 0 3247 3376 660245363 660245234 5.710000e-46 196.0
46 TraesCS2B01G351600 chr4B 93.846 130 8 0 3247 3376 82317508 82317379 5.710000e-46 196.0
47 TraesCS2B01G351600 chr1A 77.810 347 55 17 5451 5784 493501552 493501215 2.050000e-45 195.0
48 TraesCS2B01G351600 chr1A 93.878 49 3 0 5498 5546 577827777 577827729 2.790000e-09 75.0
49 TraesCS2B01G351600 chr4A 77.586 290 58 3 303 585 542552948 542552659 1.240000e-37 169.0
50 TraesCS2B01G351600 chr4A 81.013 79 12 3 7049 7125 722803158 722803081 7.810000e-05 60.2
51 TraesCS2B01G351600 chr3D 89.844 128 9 4 5662 5787 454510097 454510222 2.080000e-35 161.0
52 TraesCS2B01G351600 chr3D 75.493 355 62 17 286 627 576801576 576801918 4.510000e-32 150.0
53 TraesCS2B01G351600 chr3D 100.000 28 0 0 5737 5764 337974276 337974249 1.300000e-02 52.8
54 TraesCS2B01G351600 chr4D 80.189 212 29 11 367 567 28541629 28541838 5.830000e-31 147.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G351600 chr2B 500588979 500596188 7209 True 13315.000000 13315 100.000000 1 7210 1 chr2B.!!$R1 7209
1 TraesCS2B01G351600 chr2D 425213037 425221788 8751 True 1307.571429 3613 90.112286 108 7210 7 chr2D.!!$R2 7102
2 TraesCS2B01G351600 chr2A 562979400 562986261 6861 False 1007.375000 3557 91.394500 283 7209 8 chr2A.!!$F3 6926
3 TraesCS2B01G351600 chr3B 816799815 816801608 1793 False 563.333333 989 88.410667 2512 4504 3 chr3B.!!$F2 1992

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
96 97 0.036765 TCGGGTGACGGGAGAAATTG 60.037 55.0 0.00 0.00 44.45 2.32 F
1481 1820 0.456221 TCTTGCGAGGAGATTCCGTC 59.544 55.0 0.00 0.00 42.75 4.79 F
1996 2385 0.833834 ACGATCCCAGCCCTCCTATG 60.834 60.0 0.00 0.00 0.00 2.23 F
3269 3824 0.032813 ACTCCCTCCGTCCGGAAATA 60.033 55.0 5.23 0.00 44.66 1.40 F
3807 4365 0.032813 AGTATTTCCGGACGGAGGGA 60.033 55.0 13.64 4.95 46.06 4.20 F
5565 6262 0.034863 GGCAACCCGAATCCAAGGTA 60.035 55.0 0.00 0.00 32.21 3.08 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1767 2114 0.877649 CATGTCAATCGGCGAGGAGG 60.878 60.0 17.22 4.62 0.00 4.30 R
3249 3804 0.032813 ATTTCCGGACGGAGGGAGTA 60.033 55.0 13.64 0.00 46.06 2.59 R
3252 3807 0.032813 AGTATTTCCGGACGGAGGGA 60.033 55.0 13.64 4.95 46.06 4.20 R
4973 5660 0.179187 CGTTGTTGTTGTTGTCCGCA 60.179 50.0 0.00 0.00 0.00 5.69 R
5646 6343 1.617018 TAGCTCCTGCGATGCAAGGT 61.617 55.0 2.14 0.00 45.42 3.50 R
6661 7645 0.039256 TCAAATGTTTGCGCCTGCTC 60.039 50.0 4.18 0.00 43.34 4.26 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
37 38 1.935933 GTATGTGTTACCAGGCCGAG 58.064 55.000 0.00 0.00 0.00 4.63
38 39 0.177141 TATGTGTTACCAGGCCGAGC 59.823 55.000 0.00 0.00 0.00 5.03
39 40 1.553690 ATGTGTTACCAGGCCGAGCT 61.554 55.000 0.00 0.00 0.00 4.09
40 41 0.901114 TGTGTTACCAGGCCGAGCTA 60.901 55.000 0.00 0.00 0.00 3.32
41 42 0.248289 GTGTTACCAGGCCGAGCTAA 59.752 55.000 0.00 0.00 0.00 3.09
42 43 1.134491 GTGTTACCAGGCCGAGCTAAT 60.134 52.381 0.00 0.00 0.00 1.73
43 44 1.138266 TGTTACCAGGCCGAGCTAATC 59.862 52.381 0.00 0.00 0.00 1.75
44 45 1.138266 GTTACCAGGCCGAGCTAATCA 59.862 52.381 0.00 0.00 0.00 2.57
45 46 1.491668 TACCAGGCCGAGCTAATCAA 58.508 50.000 0.00 0.00 0.00 2.57
46 47 0.618458 ACCAGGCCGAGCTAATCAAA 59.382 50.000 0.00 0.00 0.00 2.69
47 48 1.017387 CCAGGCCGAGCTAATCAAAC 58.983 55.000 0.00 0.00 0.00 2.93
48 49 1.678728 CCAGGCCGAGCTAATCAAACA 60.679 52.381 0.00 0.00 0.00 2.83
49 50 1.398390 CAGGCCGAGCTAATCAAACAC 59.602 52.381 0.00 0.00 0.00 3.32
50 51 1.003118 AGGCCGAGCTAATCAAACACA 59.997 47.619 0.00 0.00 0.00 3.72
51 52 2.017049 GGCCGAGCTAATCAAACACAT 58.983 47.619 0.00 0.00 0.00 3.21
52 53 3.118408 AGGCCGAGCTAATCAAACACATA 60.118 43.478 0.00 0.00 0.00 2.29
53 54 3.815401 GGCCGAGCTAATCAAACACATAT 59.185 43.478 0.00 0.00 0.00 1.78
54 55 4.994852 GGCCGAGCTAATCAAACACATATA 59.005 41.667 0.00 0.00 0.00 0.86
55 56 5.468746 GGCCGAGCTAATCAAACACATATAA 59.531 40.000 0.00 0.00 0.00 0.98
56 57 6.149474 GGCCGAGCTAATCAAACACATATAAT 59.851 38.462 0.00 0.00 0.00 1.28
57 58 7.017645 GCCGAGCTAATCAAACACATATAATG 58.982 38.462 0.00 0.00 0.00 1.90
58 59 7.095229 GCCGAGCTAATCAAACACATATAATGA 60.095 37.037 0.00 0.00 0.00 2.57
59 60 8.773645 CCGAGCTAATCAAACACATATAATGAA 58.226 33.333 0.00 0.00 0.00 2.57
72 73 8.721478 ACACATATAATGAAATCAGATTACGCC 58.279 33.333 0.00 0.00 0.00 5.68
73 74 7.899841 CACATATAATGAAATCAGATTACGCCG 59.100 37.037 0.00 0.00 0.00 6.46
74 75 7.602644 ACATATAATGAAATCAGATTACGCCGT 59.397 33.333 0.00 0.00 0.00 5.68
75 76 9.083080 CATATAATGAAATCAGATTACGCCGTA 57.917 33.333 0.00 0.00 0.00 4.02
76 77 7.956420 ATAATGAAATCAGATTACGCCGTAA 57.044 32.000 12.63 12.63 32.36 3.18
77 78 6.861065 AATGAAATCAGATTACGCCGTAAT 57.139 33.333 21.46 21.46 40.82 1.89
89 90 3.199551 CGTAATCGGGTGACGGGA 58.800 61.111 0.00 0.00 44.45 5.14
90 91 1.065273 CGTAATCGGGTGACGGGAG 59.935 63.158 0.00 0.00 44.45 4.30
91 92 1.378882 CGTAATCGGGTGACGGGAGA 61.379 60.000 0.00 0.00 44.45 3.71
92 93 0.819582 GTAATCGGGTGACGGGAGAA 59.180 55.000 0.00 0.00 44.45 2.87
93 94 1.205417 GTAATCGGGTGACGGGAGAAA 59.795 52.381 0.00 0.00 44.45 2.52
94 95 0.909623 AATCGGGTGACGGGAGAAAT 59.090 50.000 0.00 0.00 44.45 2.17
95 96 0.909623 ATCGGGTGACGGGAGAAATT 59.090 50.000 0.00 0.00 44.45 1.82
96 97 0.036765 TCGGGTGACGGGAGAAATTG 60.037 55.000 0.00 0.00 44.45 2.32
97 98 0.036765 CGGGTGACGGGAGAAATTGA 60.037 55.000 0.00 0.00 39.42 2.57
98 99 1.406887 CGGGTGACGGGAGAAATTGAT 60.407 52.381 0.00 0.00 39.42 2.57
99 100 2.723273 GGGTGACGGGAGAAATTGATT 58.277 47.619 0.00 0.00 0.00 2.57
100 101 2.423538 GGGTGACGGGAGAAATTGATTG 59.576 50.000 0.00 0.00 0.00 2.67
101 102 2.423538 GGTGACGGGAGAAATTGATTGG 59.576 50.000 0.00 0.00 0.00 3.16
102 103 3.343617 GTGACGGGAGAAATTGATTGGA 58.656 45.455 0.00 0.00 0.00 3.53
103 104 3.127030 GTGACGGGAGAAATTGATTGGAC 59.873 47.826 0.00 0.00 0.00 4.02
104 105 2.683362 GACGGGAGAAATTGATTGGACC 59.317 50.000 0.00 0.00 0.00 4.46
105 106 2.041081 ACGGGAGAAATTGATTGGACCA 59.959 45.455 0.00 0.00 0.00 4.02
106 107 3.088532 CGGGAGAAATTGATTGGACCAA 58.911 45.455 9.92 9.92 0.00 3.67
127 128 7.980062 ACCAAACACATCCAAAATTAAAACAC 58.020 30.769 0.00 0.00 0.00 3.32
138 139 7.599245 TCCAAAATTAAAACACAACAAACGACT 59.401 29.630 0.00 0.00 0.00 4.18
140 141 9.664826 CAAAATTAAAACACAACAAACGACTAC 57.335 29.630 0.00 0.00 0.00 2.73
158 159 9.669887 AACGACTACCCTAATCTACTAGATATG 57.330 37.037 0.00 0.00 32.89 1.78
175 176 6.807708 AGATATGAACGTTATTCACACGAC 57.192 37.500 0.00 0.00 40.20 4.34
176 177 3.965209 ATGAACGTTATTCACACGACG 57.035 42.857 0.00 0.00 40.20 5.12
182 183 4.726416 ACGTTATTCACACGACGTAAGAT 58.274 39.130 0.00 0.00 45.68 2.40
186 187 6.456026 GTTATTCACACGACGTAAGATCAAC 58.544 40.000 0.00 5.49 43.62 3.18
198 199 2.736144 AGATCAACACGGTAAAGCGA 57.264 45.000 8.75 0.00 0.00 4.93
235 236 0.532573 TGTGCCCGAAAAGTGCAAAA 59.467 45.000 0.00 0.00 36.65 2.44
243 244 2.061028 GAAAAGTGCAAAATGAGGGCG 58.939 47.619 0.00 0.00 0.00 6.13
256 257 1.094785 GAGGGCGAGCTTGCAAAATA 58.905 50.000 27.02 0.00 36.28 1.40
258 259 1.892474 AGGGCGAGCTTGCAAAATAAA 59.108 42.857 27.02 0.00 36.28 1.40
261 262 3.429410 GGGCGAGCTTGCAAAATAAAGAT 60.429 43.478 27.02 0.00 36.28 2.40
265 266 4.498323 CGAGCTTGCAAAATAAAGATGAGC 59.502 41.667 0.00 0.00 0.00 4.26
271 272 7.703621 GCTTGCAAAATAAAGATGAGCTCATTA 59.296 33.333 29.26 18.96 36.57 1.90
272 273 9.577110 CTTGCAAAATAAAGATGAGCTCATTAA 57.423 29.630 29.26 15.48 36.57 1.40
346 352 8.666573 TGTACACACCCAAATAAATGTATAACG 58.333 33.333 0.00 0.00 0.00 3.18
439 453 3.550437 TGGTCATTTTTGTTGTTGGGG 57.450 42.857 0.00 0.00 0.00 4.96
449 463 1.611491 TGTTGTTGGGGCGAGATTTTC 59.389 47.619 0.00 0.00 0.00 2.29
510 524 5.400066 TGAAATCTTACGGATCTGTCACA 57.600 39.130 11.34 0.00 32.76 3.58
515 529 8.786826 AAATCTTACGGATCTGTCACAAATAA 57.213 30.769 11.34 0.00 32.76 1.40
517 531 5.810587 TCTTACGGATCTGTCACAAATAAGC 59.189 40.000 11.34 0.00 0.00 3.09
532 546 8.081633 TCACAAATAAGCATAAGTTTTCACAGG 58.918 33.333 0.00 0.00 0.00 4.00
536 550 9.830975 AAATAAGCATAAGTTTTCACAGGTTTT 57.169 25.926 0.00 0.00 0.00 2.43
573 590 8.208718 TGAAACTTAGAAATATCATGTTCGGG 57.791 34.615 0.00 0.00 0.00 5.14
585 602 5.720371 TCATGTTCGGGTCATTTGAAAAT 57.280 34.783 0.00 0.00 0.00 1.82
589 606 8.144478 TCATGTTCGGGTCATTTGAAAATAAAA 58.856 29.630 0.00 0.00 0.00 1.52
590 607 8.934825 CATGTTCGGGTCATTTGAAAATAAAAT 58.065 29.630 0.00 0.00 0.00 1.82
598 615 7.549134 GGTCATTTGAAAATAAAATGTCCTCCC 59.451 37.037 14.06 4.47 43.71 4.30
631 648 3.429135 CCTTGGTAACTTCGCTCTCCTAC 60.429 52.174 0.00 0.00 37.61 3.18
718 1037 9.737427 ATACTCTAATGTGATAAAGAGTTCACG 57.263 33.333 8.94 0.00 44.81 4.35
743 1062 0.535102 AGGTGCCGTTTCCTTCACTG 60.535 55.000 0.00 0.00 0.00 3.66
820 1139 3.290098 GCCGACTGCACGTTAATTG 57.710 52.632 0.00 0.00 40.77 2.32
1163 1496 4.597507 AGGATAAAAGAACTGTGACAGGGA 59.402 41.667 17.92 0.00 35.51 4.20
1381 1720 4.880748 CGATTCGCATTTCTCCGC 57.119 55.556 0.00 0.00 0.00 5.54
1386 1725 0.732571 TTCGCATTTCTCCGCAATCC 59.267 50.000 0.00 0.00 0.00 3.01
1388 1727 1.375853 CGCATTTCTCCGCAATCCCA 61.376 55.000 0.00 0.00 0.00 4.37
1397 1736 1.586028 CGCAATCCCACCAAGGTTG 59.414 57.895 0.00 0.00 34.66 3.77
1407 1746 3.652581 CCAAGGTTGGTCTCCCTTC 57.347 57.895 0.09 0.00 43.43 3.46
1417 1756 1.276705 GGTCTCCCTTCTCTGTCCAAC 59.723 57.143 0.00 0.00 0.00 3.77
1481 1820 0.456221 TCTTGCGAGGAGATTCCGTC 59.544 55.000 0.00 0.00 42.75 4.79
1567 1908 8.618702 ATCCTATCATTCTGATGTCATGTTTC 57.381 34.615 0.00 0.00 37.70 2.78
1640 1981 7.009723 CGCCTTAACAGTTGTGTTTTGTTTTAT 59.990 33.333 0.00 0.00 45.00 1.40
1641 1982 9.303537 GCCTTAACAGTTGTGTTTTGTTTTATA 57.696 29.630 0.00 0.00 45.00 0.98
1654 1995 9.994432 TGTTTTGTTTTATAAAAATGTGGCTTG 57.006 25.926 12.14 0.00 0.00 4.01
1656 1997 6.793492 TGTTTTATAAAAATGTGGCTTGGC 57.207 33.333 12.14 0.00 0.00 4.52
1665 2006 0.968405 TGTGGCTTGGCTGGATTTTC 59.032 50.000 0.00 0.00 0.00 2.29
1671 2012 2.354103 GCTTGGCTGGATTTTCCTTTCC 60.354 50.000 0.00 0.00 37.46 3.13
1693 2034 2.809637 GCGTAATGCGTGTTGTTTTG 57.190 45.000 0.00 0.00 43.66 2.44
1695 2036 2.047769 CGTAATGCGTGTTGTTTTGGG 58.952 47.619 0.00 0.00 35.54 4.12
1719 2060 7.439955 GGGTCCAATTTCGTTTAAATTTCACTT 59.560 33.333 0.00 0.00 43.75 3.16
1723 2064 9.980780 CCAATTTCGTTTAAATTTCACTTTTGT 57.019 25.926 0.00 0.00 43.75 2.83
1767 2114 5.277586 CCCGTTTTTCAAAAATAGGCCAAAC 60.278 40.000 5.01 1.44 0.00 2.93
1809 2156 6.940739 TGTGGAGGAAAAGTTTGATTTGAAA 58.059 32.000 0.00 0.00 0.00 2.69
1812 2159 6.482973 TGGAGGAAAAGTTTGATTTGAAATGC 59.517 34.615 0.00 0.00 0.00 3.56
1885 2274 4.632153 AGATAAACGATCCTCCATTTCCG 58.368 43.478 0.00 0.00 34.80 4.30
1921 2310 4.749245 TTCGAATCAAAGAAGCAACCTC 57.251 40.909 0.00 0.00 0.00 3.85
1951 2340 9.638239 TTTTTCTTATCGTGGTATTACTTACGT 57.362 29.630 17.27 0.00 37.74 3.57
1972 2361 1.202245 TGTTTGGCTCAAAAGTGCGTC 60.202 47.619 2.47 0.00 35.03 5.19
1996 2385 0.833834 ACGATCCCAGCCCTCCTATG 60.834 60.000 0.00 0.00 0.00 2.23
2018 2411 9.708222 CTATGTCTTTTATCAAATTCTTCACCG 57.292 33.333 0.00 0.00 0.00 4.94
2114 2516 2.109799 CGAGCCCCGAATCAGCAT 59.890 61.111 0.00 0.00 41.76 3.79
2216 2621 0.958822 TTTTCGGCTCCTTTTCTGGC 59.041 50.000 0.00 0.00 0.00 4.85
2419 2827 2.095567 CGAGCCAAAGATTTGTGTGAGG 60.096 50.000 4.71 0.00 36.45 3.86
2430 2842 1.102154 TGTGTGAGGCCAACAAACTG 58.898 50.000 19.26 0.00 0.00 3.16
2474 2886 4.584327 TCTCTGTTCTTGTCGTTGATGA 57.416 40.909 0.00 0.00 0.00 2.92
2496 2908 1.000938 GTTTCTGCCCTGCTGTCTTTG 60.001 52.381 0.00 0.00 0.00 2.77
2506 2918 4.374399 CCTGCTGTCTTTGCTGAATTTTT 58.626 39.130 0.00 0.00 0.00 1.94
2523 2964 3.314541 TTTTTACCTGGCTCTCGTCTC 57.685 47.619 0.00 0.00 0.00 3.36
2524 2965 1.183549 TTTACCTGGCTCTCGTCTCC 58.816 55.000 0.00 0.00 0.00 3.71
3021 3471 5.105877 CGTCAGAGTGTAGGGATTGTTCTTA 60.106 44.000 0.00 0.00 0.00 2.10
3024 3474 8.475639 GTCAGAGTGTAGGGATTGTTCTTAATA 58.524 37.037 0.00 0.00 0.00 0.98
3243 3798 9.893305 AAGTTTGTATATTTCTGTTCCTTTTCG 57.107 29.630 0.00 0.00 0.00 3.46
3248 3803 8.928733 TGTATATTTCTGTTCCTTTTCGTGTAC 58.071 33.333 0.00 0.00 0.00 2.90
3249 3804 9.148104 GTATATTTCTGTTCCTTTTCGTGTACT 57.852 33.333 0.00 0.00 0.00 2.73
3251 3806 6.833342 TTTCTGTTCCTTTTCGTGTACTAC 57.167 37.500 0.00 0.00 0.00 2.73
3252 3807 5.779529 TCTGTTCCTTTTCGTGTACTACT 57.220 39.130 0.00 0.00 0.00 2.57
3253 3808 5.766222 TCTGTTCCTTTTCGTGTACTACTC 58.234 41.667 0.00 0.00 0.00 2.59
3254 3809 4.874970 TGTTCCTTTTCGTGTACTACTCC 58.125 43.478 0.00 0.00 0.00 3.85
3255 3810 4.240888 GTTCCTTTTCGTGTACTACTCCC 58.759 47.826 0.00 0.00 0.00 4.30
3256 3811 3.771216 TCCTTTTCGTGTACTACTCCCT 58.229 45.455 0.00 0.00 0.00 4.20
3257 3812 3.760684 TCCTTTTCGTGTACTACTCCCTC 59.239 47.826 0.00 0.00 0.00 4.30
3258 3813 3.119209 CCTTTTCGTGTACTACTCCCTCC 60.119 52.174 0.00 0.00 0.00 4.30
3259 3814 1.742761 TTCGTGTACTACTCCCTCCG 58.257 55.000 0.00 0.00 0.00 4.63
3260 3815 0.615331 TCGTGTACTACTCCCTCCGT 59.385 55.000 0.00 0.00 0.00 4.69
3261 3816 1.012841 CGTGTACTACTCCCTCCGTC 58.987 60.000 0.00 0.00 0.00 4.79
3262 3817 1.387539 GTGTACTACTCCCTCCGTCC 58.612 60.000 0.00 0.00 0.00 4.79
3263 3818 0.107508 TGTACTACTCCCTCCGTCCG 60.108 60.000 0.00 0.00 0.00 4.79
3264 3819 0.817229 GTACTACTCCCTCCGTCCGG 60.817 65.000 0.00 0.00 0.00 5.14
3265 3820 0.982852 TACTACTCCCTCCGTCCGGA 60.983 60.000 0.00 0.00 42.90 5.14
3266 3821 1.077212 CTACTCCCTCCGTCCGGAA 60.077 63.158 5.23 0.00 44.66 4.30
3267 3822 0.682209 CTACTCCCTCCGTCCGGAAA 60.682 60.000 5.23 0.00 44.66 3.13
3268 3823 0.032813 TACTCCCTCCGTCCGGAAAT 60.033 55.000 5.23 0.00 44.66 2.17
3269 3824 0.032813 ACTCCCTCCGTCCGGAAATA 60.033 55.000 5.23 0.00 44.66 1.40
3270 3825 0.388294 CTCCCTCCGTCCGGAAATAC 59.612 60.000 5.23 0.00 44.66 1.89
3271 3826 0.032813 TCCCTCCGTCCGGAAATACT 60.033 55.000 5.23 0.00 44.66 2.12
3272 3827 0.828677 CCCTCCGTCCGGAAATACTT 59.171 55.000 5.23 0.00 44.66 2.24
3273 3828 1.472728 CCCTCCGTCCGGAAATACTTG 60.473 57.143 5.23 0.00 44.66 3.16
3274 3829 1.206371 CCTCCGTCCGGAAATACTTGT 59.794 52.381 5.23 0.00 44.66 3.16
3275 3830 2.537401 CTCCGTCCGGAAATACTTGTC 58.463 52.381 5.23 0.00 44.66 3.18
3276 3831 1.894466 TCCGTCCGGAAATACTTGTCA 59.106 47.619 5.23 0.00 42.05 3.58
3277 3832 2.498481 TCCGTCCGGAAATACTTGTCAT 59.502 45.455 5.23 0.00 42.05 3.06
3278 3833 2.864343 CCGTCCGGAAATACTTGTCATC 59.136 50.000 5.23 0.00 37.50 2.92
3279 3834 3.517602 CGTCCGGAAATACTTGTCATCA 58.482 45.455 5.23 0.00 0.00 3.07
3280 3835 3.930229 CGTCCGGAAATACTTGTCATCAA 59.070 43.478 5.23 0.00 0.00 2.57
3281 3836 4.390603 CGTCCGGAAATACTTGTCATCAAA 59.609 41.667 5.23 0.00 32.87 2.69
3282 3837 5.106869 CGTCCGGAAATACTTGTCATCAAAA 60.107 40.000 5.23 0.00 32.87 2.44
3283 3838 6.403200 CGTCCGGAAATACTTGTCATCAAAAT 60.403 38.462 5.23 0.00 32.87 1.82
3284 3839 6.747280 GTCCGGAAATACTTGTCATCAAAATG 59.253 38.462 5.23 0.00 32.87 2.32
3285 3840 6.657117 TCCGGAAATACTTGTCATCAAAATGA 59.343 34.615 0.00 0.00 39.63 2.57
3286 3841 7.175816 TCCGGAAATACTTGTCATCAAAATGAA 59.824 33.333 0.00 0.00 43.42 2.57
3287 3842 7.975616 CCGGAAATACTTGTCATCAAAATGAAT 59.024 33.333 0.00 0.00 43.42 2.57
3295 3850 8.869109 ACTTGTCATCAAAATGAATAAAAGGGA 58.131 29.630 0.00 0.00 43.42 4.20
3296 3851 9.709495 CTTGTCATCAAAATGAATAAAAGGGAA 57.291 29.630 0.00 0.00 43.42 3.97
3298 3853 9.656040 TGTCATCAAAATGAATAAAAGGGAATG 57.344 29.630 0.00 0.00 43.42 2.67
3299 3854 9.657419 GTCATCAAAATGAATAAAAGGGAATGT 57.343 29.630 0.00 0.00 43.42 2.71
3309 3864 9.693739 TGAATAAAAGGGAATGTATGTACATGT 57.306 29.630 18.81 2.69 45.55 3.21
3315 3870 9.693739 AAAGGGAATGTATGTACATGTATTTCA 57.306 29.630 18.81 2.89 45.55 2.69
3316 3871 8.908786 AGGGAATGTATGTACATGTATTTCAG 57.091 34.615 18.81 0.00 45.55 3.02
3317 3872 8.494433 AGGGAATGTATGTACATGTATTTCAGT 58.506 33.333 18.81 6.00 45.55 3.41
3318 3873 9.120538 GGGAATGTATGTACATGTATTTCAGTT 57.879 33.333 18.81 1.45 45.55 3.16
3355 3910 9.381033 TCATTTTTGTTCATTTTGATGACAAGT 57.619 25.926 0.00 0.00 37.32 3.16
3365 3920 9.474920 TCATTTTGATGACAAGTATTTTTGGAC 57.525 29.630 0.00 0.00 37.32 4.02
3366 3921 9.258826 CATTTTGATGACAAGTATTTTTGGACA 57.741 29.630 0.00 0.00 37.32 4.02
3367 3922 8.870160 TTTTGATGACAAGTATTTTTGGACAG 57.130 30.769 0.00 0.00 37.32 3.51
3368 3923 7.815840 TTGATGACAAGTATTTTTGGACAGA 57.184 32.000 0.00 0.00 32.32 3.41
3369 3924 7.439157 TGATGACAAGTATTTTTGGACAGAG 57.561 36.000 0.00 0.00 32.32 3.35
3370 3925 6.430925 TGATGACAAGTATTTTTGGACAGAGG 59.569 38.462 0.00 0.00 32.32 3.69
3371 3926 5.070001 TGACAAGTATTTTTGGACAGAGGG 58.930 41.667 0.00 0.00 32.32 4.30
3372 3927 5.163141 TGACAAGTATTTTTGGACAGAGGGA 60.163 40.000 0.00 0.00 32.32 4.20
3373 3928 5.316987 ACAAGTATTTTTGGACAGAGGGAG 58.683 41.667 0.00 0.00 32.32 4.30
3374 3929 5.163088 ACAAGTATTTTTGGACAGAGGGAGT 60.163 40.000 0.00 0.00 32.32 3.85
3375 3930 6.043938 ACAAGTATTTTTGGACAGAGGGAGTA 59.956 38.462 0.00 0.00 32.32 2.59
3435 3992 6.398918 ACAGACACCATGATACTGAAGTTAC 58.601 40.000 13.10 0.00 33.53 2.50
3661 4219 7.225538 AGCTATGTGAAATTGTGTATAGTCAGC 59.774 37.037 0.00 0.00 0.00 4.26
3685 4243 5.696270 CCTTTATTCCTTGCACTGGAAAAAC 59.304 40.000 20.16 0.00 45.38 2.43
3696 4254 6.039616 TGCACTGGAAAAACAAATCAAGTAC 58.960 36.000 0.00 0.00 28.68 2.73
3698 4256 6.417930 GCACTGGAAAAACAAATCAAGTACTC 59.582 38.462 0.00 0.00 28.68 2.59
3699 4257 6.918022 CACTGGAAAAACAAATCAAGTACTCC 59.082 38.462 0.00 0.00 28.68 3.85
3700 4258 6.040504 ACTGGAAAAACAAATCAAGTACTCCC 59.959 38.462 0.00 0.00 27.91 4.30
3701 4259 6.133356 TGGAAAAACAAATCAAGTACTCCCT 58.867 36.000 0.00 0.00 0.00 4.20
3703 4261 6.294564 GGAAAAACAAATCAAGTACTCCCTCC 60.295 42.308 0.00 0.00 0.00 4.30
3705 4263 2.904434 ACAAATCAAGTACTCCCTCCGT 59.096 45.455 0.00 0.00 0.00 4.69
3706 4264 3.056035 ACAAATCAAGTACTCCCTCCGTC 60.056 47.826 0.00 0.00 0.00 4.79
3707 4265 1.777941 ATCAAGTACTCCCTCCGTCC 58.222 55.000 0.00 0.00 0.00 4.79
3708 4266 0.679002 TCAAGTACTCCCTCCGTCCG 60.679 60.000 0.00 0.00 0.00 4.79
3709 4267 1.379576 AAGTACTCCCTCCGTCCGG 60.380 63.158 0.00 0.00 0.00 5.14
3710 4268 1.856539 AAGTACTCCCTCCGTCCGGA 61.857 60.000 0.00 0.00 42.90 5.14
3711 4269 1.379044 GTACTCCCTCCGTCCGGAA 60.379 63.158 5.23 0.00 44.66 4.30
3712 4270 0.967380 GTACTCCCTCCGTCCGGAAA 60.967 60.000 5.23 0.00 44.66 3.13
3713 4271 0.032813 TACTCCCTCCGTCCGGAAAT 60.033 55.000 5.23 0.00 44.66 2.17
3714 4272 0.032813 ACTCCCTCCGTCCGGAAATA 60.033 55.000 5.23 0.00 44.66 1.40
3715 4273 1.339097 CTCCCTCCGTCCGGAAATAT 58.661 55.000 5.23 0.00 44.66 1.28
3716 4274 1.692519 CTCCCTCCGTCCGGAAATATT 59.307 52.381 5.23 0.00 44.66 1.28
3717 4275 2.104281 CTCCCTCCGTCCGGAAATATTT 59.896 50.000 5.23 0.00 44.66 1.40
3718 4276 2.158871 TCCCTCCGTCCGGAAATATTTG 60.159 50.000 5.23 0.00 44.66 2.32
3719 4277 2.420967 CCCTCCGTCCGGAAATATTTGT 60.421 50.000 5.23 0.00 44.66 2.83
3720 4278 2.870411 CCTCCGTCCGGAAATATTTGTC 59.130 50.000 5.23 0.00 44.66 3.18
3721 4279 3.527533 CTCCGTCCGGAAATATTTGTCA 58.472 45.455 5.23 0.00 44.66 3.58
3722 4280 4.127171 CTCCGTCCGGAAATATTTGTCAT 58.873 43.478 5.23 0.00 44.66 3.06
3723 4281 4.124238 TCCGTCCGGAAATATTTGTCATC 58.876 43.478 5.23 0.00 42.05 2.92
3724 4282 3.874543 CCGTCCGGAAATATTTGTCATCA 59.125 43.478 5.23 0.00 37.50 3.07
3725 4283 4.334203 CCGTCCGGAAATATTTGTCATCAA 59.666 41.667 5.23 0.00 37.50 2.57
3726 4284 5.163703 CCGTCCGGAAATATTTGTCATCAAA 60.164 40.000 5.23 0.00 41.49 2.69
3727 4285 6.318628 CGTCCGGAAATATTTGTCATCAAAA 58.681 36.000 5.23 0.00 44.97 2.44
3728 4286 6.972328 CGTCCGGAAATATTTGTCATCAAAAT 59.028 34.615 5.23 0.00 44.97 1.82
3729 4287 7.044117 CGTCCGGAAATATTTGTCATCAAAATG 60.044 37.037 5.23 0.00 44.97 2.32
3730 4288 7.222611 GTCCGGAAATATTTGTCATCAAAATGG 59.777 37.037 5.23 0.00 44.97 3.16
3731 4289 7.123397 TCCGGAAATATTTGTCATCAAAATGGA 59.877 33.333 0.00 0.00 44.97 3.41
3732 4290 7.927629 CCGGAAATATTTGTCATCAAAATGGAT 59.072 33.333 5.17 0.00 44.97 3.41
3733 4291 8.757789 CGGAAATATTTGTCATCAAAATGGATG 58.242 33.333 5.17 0.00 44.97 3.51
3746 4304 9.772973 CATCAAAATGGATGAAAATGGATGTAT 57.227 29.630 0.00 0.00 46.00 2.29
3747 4305 9.991906 ATCAAAATGGATGAAAATGGATGTATC 57.008 29.630 0.00 0.00 0.00 2.24
3748 4306 9.204337 TCAAAATGGATGAAAATGGATGTATCT 57.796 29.630 0.00 0.00 0.00 1.98
3754 4312 9.699410 TGGATGAAAATGGATGTATCTAAAACT 57.301 29.630 0.00 0.00 0.00 2.66
3786 4344 9.499479 ACATCTAGATACATCCATTTCAATGAC 57.501 33.333 4.54 0.00 38.70 3.06
3787 4345 9.498176 CATCTAGATACATCCATTTCAATGACA 57.502 33.333 4.54 0.00 38.70 3.58
3789 4347 9.551734 TCTAGATACATCCATTTCAATGACAAG 57.448 33.333 0.81 0.00 38.70 3.16
3790 4348 9.334947 CTAGATACATCCATTTCAATGACAAGT 57.665 33.333 0.81 0.00 38.70 3.16
3792 4350 9.857656 AGATACATCCATTTCAATGACAAGTAT 57.142 29.630 0.81 4.50 38.70 2.12
3796 4354 8.253113 ACATCCATTTCAATGACAAGTATTTCC 58.747 33.333 0.81 0.00 38.70 3.13
3797 4355 6.851609 TCCATTTCAATGACAAGTATTTCCG 58.148 36.000 0.81 0.00 38.70 4.30
3798 4356 6.035843 CCATTTCAATGACAAGTATTTCCGG 58.964 40.000 0.00 0.00 38.70 5.14
3799 4357 6.127758 CCATTTCAATGACAAGTATTTCCGGA 60.128 38.462 0.00 0.00 38.70 5.14
3800 4358 5.873179 TTCAATGACAAGTATTTCCGGAC 57.127 39.130 1.83 0.00 0.00 4.79
3801 4359 3.930229 TCAATGACAAGTATTTCCGGACG 59.070 43.478 1.83 0.00 0.00 4.79
3802 4360 2.373540 TGACAAGTATTTCCGGACGG 57.626 50.000 1.83 3.96 0.00 4.79
3803 4361 1.894466 TGACAAGTATTTCCGGACGGA 59.106 47.619 1.83 9.76 43.52 4.69
3804 4362 2.094390 TGACAAGTATTTCCGGACGGAG 60.094 50.000 13.64 3.15 46.06 4.63
3805 4363 1.206371 ACAAGTATTTCCGGACGGAGG 59.794 52.381 13.64 0.00 46.06 4.30
3806 4364 0.828677 AAGTATTTCCGGACGGAGGG 59.171 55.000 13.64 0.00 46.06 4.30
3807 4365 0.032813 AGTATTTCCGGACGGAGGGA 60.033 55.000 13.64 4.95 46.06 4.20
3808 4366 0.388294 GTATTTCCGGACGGAGGGAG 59.612 60.000 13.64 0.00 46.06 4.30
3809 4367 0.032813 TATTTCCGGACGGAGGGAGT 60.033 55.000 13.64 0.00 46.06 3.85
3810 4368 0.032813 ATTTCCGGACGGAGGGAGTA 60.033 55.000 13.64 0.00 46.06 2.59
3840 4398 7.431249 CATTATGCTTCTTTGCTGAACCATAT 58.569 34.615 0.00 0.00 29.79 1.78
3891 4462 4.573607 ACCATGAATGACTGATGTGATTCG 59.426 41.667 0.00 0.00 45.50 3.34
3916 4487 8.171840 CGTTGAGTTTTTCTTCTTATCCTCATC 58.828 37.037 0.00 0.00 0.00 2.92
3926 4497 2.319025 TATCCTCATCCGCATACCCA 57.681 50.000 0.00 0.00 0.00 4.51
3962 4533 2.375174 ACCTTTTGTGACCATGGAGCTA 59.625 45.455 21.47 1.87 0.00 3.32
4118 4760 2.656947 AGTTAAAGCAAGGTGGCTGA 57.343 45.000 0.00 0.00 45.07 4.26
4178 4822 8.017946 GGAATAAGTGAAAGACAGCTTTGTAAG 58.982 37.037 0.00 0.00 44.10 2.34
4183 4827 7.723324 AGTGAAAGACAGCTTTGTAAGTACTA 58.277 34.615 0.00 0.00 44.10 1.82
4189 4833 5.920903 ACAGCTTTGTAAGTACTACCAACA 58.079 37.500 0.00 0.00 0.00 3.33
4190 4834 6.531021 ACAGCTTTGTAAGTACTACCAACAT 58.469 36.000 0.00 0.00 0.00 2.71
4229 4873 8.934507 AACTAGATAAATCAGCAGAGTACAAC 57.065 34.615 0.00 0.00 0.00 3.32
4240 4885 8.407457 TCAGCAGAGTACAACTTATATTTTCG 57.593 34.615 0.00 0.00 0.00 3.46
4273 4919 5.645497 GTGAATGACAGTTTAAGGCTCTGAT 59.355 40.000 7.83 0.00 33.93 2.90
4278 4924 7.661536 TGACAGTTTAAGGCTCTGATATAGT 57.338 36.000 7.83 0.00 33.93 2.12
4279 4925 8.762481 TGACAGTTTAAGGCTCTGATATAGTA 57.238 34.615 7.83 0.00 33.93 1.82
4280 4926 9.368416 TGACAGTTTAAGGCTCTGATATAGTAT 57.632 33.333 7.83 0.00 33.93 2.12
4303 4987 1.855618 GCTTTTGTTGCTTTTTGCCGC 60.856 47.619 0.00 0.00 42.00 6.53
4324 5008 2.684881 CCTGTGGCTGATGGTATGAAAC 59.315 50.000 0.00 0.00 0.00 2.78
4327 5011 3.244875 TGTGGCTGATGGTATGAAACTGT 60.245 43.478 0.00 0.00 0.00 3.55
4330 5014 5.414454 GTGGCTGATGGTATGAAACTGTTAA 59.586 40.000 0.00 0.00 0.00 2.01
4334 5018 9.502091 GGCTGATGGTATGAAACTGTTAATATA 57.498 33.333 0.00 0.00 0.00 0.86
4377 5062 4.278419 ACTTTTGAATTCCCTCGTTCCTTG 59.722 41.667 2.27 0.00 0.00 3.61
4382 5067 0.107831 TTCCCTCGTTCCTTGTGTGG 59.892 55.000 0.00 0.00 0.00 4.17
4383 5068 0.761323 TCCCTCGTTCCTTGTGTGGA 60.761 55.000 0.00 0.00 0.00 4.02
4604 5291 4.694233 CGCCTGCCAGCTGACAGT 62.694 66.667 25.79 0.00 31.76 3.55
4638 5325 3.236618 GACAACAACGCACCGCCTC 62.237 63.158 0.00 0.00 0.00 4.70
4640 5327 4.555709 AACAACGCACCGCCTCCA 62.556 61.111 0.00 0.00 0.00 3.86
4641 5328 4.988598 ACAACGCACCGCCTCCAG 62.989 66.667 0.00 0.00 0.00 3.86
4642 5329 4.680237 CAACGCACCGCCTCCAGA 62.680 66.667 0.00 0.00 0.00 3.86
4643 5330 4.681978 AACGCACCGCCTCCAGAC 62.682 66.667 0.00 0.00 0.00 3.51
4646 5333 4.101448 GCACCGCCTCCAGACCAT 62.101 66.667 0.00 0.00 0.00 3.55
4647 5334 2.124983 CACCGCCTCCAGACCATG 60.125 66.667 0.00 0.00 0.00 3.66
4691 5378 3.541713 GAGGCGGCGAAGGGAGAT 61.542 66.667 12.98 0.00 0.00 2.75
4901 5588 3.902112 CACAACCACCCCAGGCCT 61.902 66.667 0.00 0.00 0.00 5.19
5159 5846 1.221840 GATGCAGGTCCATGACGGT 59.778 57.895 0.00 0.00 35.57 4.83
5162 5849 2.665000 CAGGTCCATGACGGTGCT 59.335 61.111 0.00 0.00 35.57 4.40
5177 5864 4.070552 GCTGCCCGGTTCGAGTCT 62.071 66.667 0.00 0.00 0.00 3.24
5183 5870 3.271014 CGGTTCGAGTCTCCGGAA 58.729 61.111 5.23 0.00 40.49 4.30
5340 6027 1.066645 ACAATCTCATCTCTGCACGCA 60.067 47.619 0.00 0.00 0.00 5.24
5341 6028 2.210961 CAATCTCATCTCTGCACGCAT 58.789 47.619 0.00 0.00 0.00 4.73
5342 6029 1.867166 ATCTCATCTCTGCACGCATG 58.133 50.000 0.00 0.00 0.00 4.06
5359 6048 3.242576 CGCATGCACCATATGTTCGTTTA 60.243 43.478 19.57 0.00 0.00 2.01
5360 6049 4.282068 GCATGCACCATATGTTCGTTTAG 58.718 43.478 14.21 0.00 0.00 1.85
5361 6050 4.035091 GCATGCACCATATGTTCGTTTAGA 59.965 41.667 14.21 0.00 0.00 2.10
5362 6051 5.448496 GCATGCACCATATGTTCGTTTAGAA 60.448 40.000 14.21 0.00 36.31 2.10
5364 6053 6.176975 TGCACCATATGTTCGTTTAGAAAG 57.823 37.500 1.24 0.00 41.10 2.62
5393 6090 1.133513 TGTGCTCATTTTGGGTGGACT 60.134 47.619 0.00 0.00 0.00 3.85
5565 6262 0.034863 GGCAACCCGAATCCAAGGTA 60.035 55.000 0.00 0.00 32.21 3.08
5566 6263 1.092348 GCAACCCGAATCCAAGGTAC 58.908 55.000 0.00 0.00 32.21 3.34
5567 6264 1.365699 CAACCCGAATCCAAGGTACG 58.634 55.000 0.00 0.00 32.21 3.67
5568 6265 0.978907 AACCCGAATCCAAGGTACGT 59.021 50.000 0.00 0.00 32.21 3.57
5574 6271 2.159531 CGAATCCAAGGTACGTACGTCA 60.160 50.000 26.53 8.81 0.00 4.35
5578 6275 2.884012 TCCAAGGTACGTACGTCAGAAA 59.116 45.455 26.53 3.48 0.00 2.52
5581 6278 3.273919 AGGTACGTACGTCAGAAACAC 57.726 47.619 26.53 15.19 0.00 3.32
5587 6284 2.024875 CGTACGTCAGAAACACGAATCG 59.975 50.000 7.22 0.00 39.75 3.34
5599 6296 2.036733 ACACGAATCGACTTTCCTTGGA 59.963 45.455 10.55 0.00 0.00 3.53
5600 6297 2.668457 CACGAATCGACTTTCCTTGGAG 59.332 50.000 10.55 0.00 0.00 3.86
5601 6298 1.661112 CGAATCGACTTTCCTTGGAGC 59.339 52.381 0.00 0.00 0.00 4.70
5602 6299 2.699954 GAATCGACTTTCCTTGGAGCA 58.300 47.619 0.00 0.00 0.00 4.26
5603 6300 2.859165 ATCGACTTTCCTTGGAGCAA 57.141 45.000 0.00 0.00 0.00 3.91
5604 6301 2.859165 TCGACTTTCCTTGGAGCAAT 57.141 45.000 0.00 0.00 0.00 3.56
5605 6302 2.426522 TCGACTTTCCTTGGAGCAATG 58.573 47.619 0.00 0.00 0.00 2.82
5606 6303 2.154462 CGACTTTCCTTGGAGCAATGT 58.846 47.619 0.00 0.00 0.00 2.71
5609 6306 4.327680 GACTTTCCTTGGAGCAATGTAGT 58.672 43.478 0.00 0.00 0.00 2.73
5611 6308 5.246307 ACTTTCCTTGGAGCAATGTAGTAC 58.754 41.667 0.00 0.00 0.00 2.73
5622 6319 6.040616 GGAGCAATGTAGTACTGTATGTAGGT 59.959 42.308 5.39 0.35 0.00 3.08
5646 6343 2.362397 GGCAGACTCTCATGGATCGTAA 59.638 50.000 0.00 0.00 0.00 3.18
6220 6955 5.106673 GGCACCGGATGTAGATAATAAAAGC 60.107 44.000 9.46 0.00 0.00 3.51
6227 6962 6.881602 GGATGTAGATAATAAAAGCAGGAGGG 59.118 42.308 0.00 0.00 0.00 4.30
6232 6967 1.286248 ATAAAAGCAGGAGGGTCGGT 58.714 50.000 0.00 0.00 0.00 4.69
6313 7049 5.013183 ACAATCACCCTTACTTCTTGCTACT 59.987 40.000 0.00 0.00 0.00 2.57
6320 7059 7.824779 CACCCTTACTTCTTGCTACTATTTTCT 59.175 37.037 0.00 0.00 0.00 2.52
6349 7088 5.204409 TCTTCCTGCTACAAGTTCGTTTA 57.796 39.130 0.00 0.00 0.00 2.01
6351 7090 6.228258 TCTTCCTGCTACAAGTTCGTTTAAT 58.772 36.000 0.00 0.00 0.00 1.40
6354 7093 7.266922 TCCTGCTACAAGTTCGTTTAATTTT 57.733 32.000 0.00 0.00 0.00 1.82
6360 7099 8.021396 GCTACAAGTTCGTTTAATTTTCTCCAT 58.979 33.333 0.00 0.00 0.00 3.41
6518 7261 6.158598 GCTAGCCAATTTGTTTCATTTCAGA 58.841 36.000 2.29 0.00 0.00 3.27
6536 7279 4.223953 TCAGACTTTCAGTAGACCAACCT 58.776 43.478 0.00 0.00 0.00 3.50
6537 7280 4.281182 TCAGACTTTCAGTAGACCAACCTC 59.719 45.833 0.00 0.00 0.00 3.85
6538 7281 4.282195 CAGACTTTCAGTAGACCAACCTCT 59.718 45.833 0.00 0.00 0.00 3.69
6539 7282 4.902448 AGACTTTCAGTAGACCAACCTCTT 59.098 41.667 0.00 0.00 0.00 2.85
6540 7283 6.015350 CAGACTTTCAGTAGACCAACCTCTTA 60.015 42.308 0.00 0.00 0.00 2.10
6541 7284 6.726764 AGACTTTCAGTAGACCAACCTCTTAT 59.273 38.462 0.00 0.00 0.00 1.73
6559 7543 6.293955 CCTCTTATCTTTTTCAAAGAACGCCA 60.294 38.462 3.13 0.00 0.00 5.69
6560 7544 7.214467 TCTTATCTTTTTCAAAGAACGCCAT 57.786 32.000 3.13 0.00 0.00 4.40
6569 7553 0.625849 AAGAACGCCATCATCCCCTT 59.374 50.000 0.00 0.00 0.00 3.95
6620 7604 2.880890 ACTGAAACAACCACAGCAGATC 59.119 45.455 0.00 0.00 35.38 2.75
6621 7605 3.144506 CTGAAACAACCACAGCAGATCT 58.855 45.455 0.00 0.00 0.00 2.75
6646 7630 3.521126 TCAAAGCAATCCTAAGGAGCTCT 59.479 43.478 14.64 0.00 33.06 4.09
6661 7645 0.039617 GCTCTCCTCGGTGATGATCG 60.040 60.000 0.00 0.00 0.00 3.69
6777 9242 3.943671 TTCCAGACTCCCTGAAAAACA 57.056 42.857 0.00 0.00 45.78 2.83
6788 9254 8.017418 ACTCCCTGAAAAACAAATTCATTACA 57.983 30.769 0.00 0.00 36.30 2.41
6809 9275 4.943705 ACATAACAACCATAAGCTCCACAG 59.056 41.667 0.00 0.00 0.00 3.66
6816 9282 3.279434 CCATAAGCTCCACAGGGTTTAC 58.721 50.000 0.00 0.00 34.93 2.01
6830 9296 4.401202 CAGGGTTTACAAGTGACCAAGTTT 59.599 41.667 8.99 0.00 35.11 2.66
6832 9298 5.591472 AGGGTTTACAAGTGACCAAGTTTAC 59.409 40.000 8.99 0.00 35.11 2.01
6833 9299 5.591472 GGGTTTACAAGTGACCAAGTTTACT 59.409 40.000 8.99 0.00 35.11 2.24
6834 9300 6.459161 GGGTTTACAAGTGACCAAGTTTACTG 60.459 42.308 8.99 0.00 35.11 2.74
6835 9301 6.094464 GGTTTACAAGTGACCAAGTTTACTGT 59.906 38.462 3.61 0.00 33.61 3.55
6836 9302 7.362315 GGTTTACAAGTGACCAAGTTTACTGTT 60.362 37.037 0.00 0.00 33.61 3.16
6837 9303 5.813080 ACAAGTGACCAAGTTTACTGTTC 57.187 39.130 0.00 0.00 0.00 3.18
6838 9304 5.250200 ACAAGTGACCAAGTTTACTGTTCA 58.750 37.500 0.00 0.00 0.00 3.18
6839 9305 5.885912 ACAAGTGACCAAGTTTACTGTTCAT 59.114 36.000 0.00 0.00 0.00 2.57
6840 9306 6.183360 ACAAGTGACCAAGTTTACTGTTCATG 60.183 38.462 0.00 0.00 0.00 3.07
6844 9310 7.554835 AGTGACCAAGTTTACTGTTCATGTAAA 59.445 33.333 0.00 0.00 37.49 2.01
6845 9311 8.185505 GTGACCAAGTTTACTGTTCATGTAAAA 58.814 33.333 0.00 0.00 40.24 1.52
6847 9313 9.744468 GACCAAGTTTACTGTTCATGTAAAATT 57.256 29.630 6.34 6.34 43.89 1.82
6932 9426 9.880157 AAATTTTATCTTGAAATGACATCCCTG 57.120 29.630 0.00 0.00 0.00 4.45
6939 9433 0.625683 AATGACATCCCTGGAGGCCT 60.626 55.000 3.86 3.86 34.51 5.19
6943 9437 0.983378 ACATCCCTGGAGGCCTGTAC 60.983 60.000 12.00 0.00 34.51 2.90
6968 9462 5.728637 AAAAGTCCAGCTAGAATTTTGGG 57.271 39.130 17.35 0.00 41.14 4.12
6969 9463 3.372440 AGTCCAGCTAGAATTTTGGGG 57.628 47.619 0.00 0.00 0.00 4.96
6970 9464 1.751351 GTCCAGCTAGAATTTTGGGGC 59.249 52.381 0.00 0.00 0.00 5.80
6971 9465 1.357420 TCCAGCTAGAATTTTGGGGCA 59.643 47.619 0.00 0.00 0.00 5.36
6972 9466 1.478105 CCAGCTAGAATTTTGGGGCAC 59.522 52.381 0.00 0.00 0.00 5.01
6973 9467 2.170166 CAGCTAGAATTTTGGGGCACA 58.830 47.619 0.00 0.00 0.00 4.57
6974 9468 2.094545 CAGCTAGAATTTTGGGGCACAC 60.095 50.000 0.00 0.00 0.00 3.82
6975 9469 1.892474 GCTAGAATTTTGGGGCACACA 59.108 47.619 0.00 0.00 0.00 3.72
6976 9470 2.497273 GCTAGAATTTTGGGGCACACAT 59.503 45.455 0.00 0.00 0.00 3.21
6977 9471 3.699038 GCTAGAATTTTGGGGCACACATA 59.301 43.478 0.00 0.00 0.00 2.29
6978 9472 4.342092 GCTAGAATTTTGGGGCACACATAT 59.658 41.667 0.00 0.00 0.00 1.78
6979 9473 5.163416 GCTAGAATTTTGGGGCACACATATT 60.163 40.000 0.00 0.00 0.00 1.28
6980 9474 5.760484 AGAATTTTGGGGCACACATATTT 57.240 34.783 0.00 0.00 0.00 1.40
6981 9475 5.490159 AGAATTTTGGGGCACACATATTTG 58.510 37.500 0.00 0.00 0.00 2.32
6982 9476 4.906747 ATTTTGGGGCACACATATTTGT 57.093 36.364 0.00 0.00 36.15 2.83
6983 9477 4.696479 TTTTGGGGCACACATATTTGTT 57.304 36.364 0.00 0.00 32.34 2.83
6984 9478 4.696479 TTTGGGGCACACATATTTGTTT 57.304 36.364 0.00 0.00 32.34 2.83
6985 9479 4.696479 TTGGGGCACACATATTTGTTTT 57.304 36.364 0.00 0.00 32.34 2.43
6986 9480 4.000331 TGGGGCACACATATTTGTTTTG 58.000 40.909 0.00 0.00 32.34 2.44
6987 9481 3.389329 TGGGGCACACATATTTGTTTTGT 59.611 39.130 0.00 0.00 32.34 2.83
6988 9482 4.141620 TGGGGCACACATATTTGTTTTGTT 60.142 37.500 0.00 0.00 32.34 2.83
6999 9493 0.969149 TGTTTTGTTGGCACACACCA 59.031 45.000 0.00 0.00 39.29 4.17
7005 9499 0.944386 GTTGGCACACACCACTACAG 59.056 55.000 0.00 0.00 40.19 2.74
7009 9503 0.798776 GCACACACCACTACAGATGC 59.201 55.000 0.00 0.00 0.00 3.91
7015 9509 3.569701 CACACCACTACAGATGCCTTTTT 59.430 43.478 0.00 0.00 0.00 1.94
7039 9533 4.213906 GTGGCAAAATTTGAAGGATGTTGG 59.786 41.667 10.26 0.00 0.00 3.77
7060 9554 8.420222 TGTTGGAAAACTTGTTGATGTTCATAT 58.580 29.630 0.00 0.00 0.00 1.78
7088 9583 8.964420 TTATTTTGGAATTTACTCTTCTTGCG 57.036 30.769 0.00 0.00 0.00 4.85
7090 9585 4.280436 TGGAATTTACTCTTCTTGCGGA 57.720 40.909 0.00 0.00 0.00 5.54
7161 9656 8.930760 AGTTACATCATTCTTCTCTTTCTTTCG 58.069 33.333 0.00 0.00 0.00 3.46
7173 9673 9.145865 CTTCTCTTTCTTTCGTAGCTAAATCTT 57.854 33.333 0.00 0.00 0.00 2.40
7189 9689 6.636850 GCTAAATCTTCGAAAGAGCACAAAAA 59.363 34.615 0.00 0.00 41.61 1.94
7190 9690 6.812481 AAATCTTCGAAAGAGCACAAAAAC 57.188 33.333 0.00 0.00 41.61 2.43
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
18 19 1.935933 CTCGGCCTGGTAACACATAC 58.064 55.000 0.00 0.00 46.17 2.39
19 20 0.177141 GCTCGGCCTGGTAACACATA 59.823 55.000 0.00 0.00 46.17 2.29
20 21 1.078426 GCTCGGCCTGGTAACACAT 60.078 57.895 0.00 0.00 46.17 3.21
21 22 0.901114 TAGCTCGGCCTGGTAACACA 60.901 55.000 0.00 0.00 46.17 3.72
22 23 0.248289 TTAGCTCGGCCTGGTAACAC 59.752 55.000 0.00 0.00 46.17 3.32
24 25 1.138266 TGATTAGCTCGGCCTGGTAAC 59.862 52.381 15.99 11.77 31.53 2.50
25 26 1.491668 TGATTAGCTCGGCCTGGTAA 58.508 50.000 15.99 15.99 32.96 2.85
26 27 1.491668 TTGATTAGCTCGGCCTGGTA 58.508 50.000 0.00 0.25 0.00 3.25
27 28 0.618458 TTTGATTAGCTCGGCCTGGT 59.382 50.000 0.00 1.36 0.00 4.00
28 29 1.017387 GTTTGATTAGCTCGGCCTGG 58.983 55.000 0.00 0.00 0.00 4.45
29 30 1.398390 GTGTTTGATTAGCTCGGCCTG 59.602 52.381 0.00 0.00 0.00 4.85
30 31 1.003118 TGTGTTTGATTAGCTCGGCCT 59.997 47.619 0.00 0.00 0.00 5.19
31 32 1.448985 TGTGTTTGATTAGCTCGGCC 58.551 50.000 0.00 0.00 0.00 6.13
32 33 6.539649 TTATATGTGTTTGATTAGCTCGGC 57.460 37.500 0.00 0.00 0.00 5.54
33 34 8.310406 TCATTATATGTGTTTGATTAGCTCGG 57.690 34.615 0.00 0.00 0.00 4.63
46 47 8.721478 GGCGTAATCTGATTTCATTATATGTGT 58.279 33.333 8.38 0.00 0.00 3.72
47 48 7.899841 CGGCGTAATCTGATTTCATTATATGTG 59.100 37.037 8.38 0.00 0.00 3.21
48 49 7.602644 ACGGCGTAATCTGATTTCATTATATGT 59.397 33.333 12.58 0.00 0.00 2.29
49 50 7.963981 ACGGCGTAATCTGATTTCATTATATG 58.036 34.615 12.58 0.00 0.00 1.78
50 51 9.647797 TTACGGCGTAATCTGATTTCATTATAT 57.352 29.630 27.03 0.00 0.00 0.86
51 52 9.647797 ATTACGGCGTAATCTGATTTCATTATA 57.352 29.630 32.99 8.80 34.08 0.98
52 53 7.956420 TTACGGCGTAATCTGATTTCATTAT 57.044 32.000 27.03 0.00 0.00 1.28
53 54 7.148869 CGATTACGGCGTAATCTGATTTCATTA 60.149 37.037 44.05 21.08 46.95 1.90
54 55 6.346598 CGATTACGGCGTAATCTGATTTCATT 60.347 38.462 44.05 25.01 46.95 2.57
55 56 5.118664 CGATTACGGCGTAATCTGATTTCAT 59.881 40.000 44.05 25.42 46.95 2.57
56 57 4.443063 CGATTACGGCGTAATCTGATTTCA 59.557 41.667 44.05 22.05 46.95 2.69
57 58 4.931214 CGATTACGGCGTAATCTGATTTC 58.069 43.478 44.05 30.60 46.95 2.17
58 59 4.966850 CGATTACGGCGTAATCTGATTT 57.033 40.909 44.05 27.18 46.95 2.17
72 73 1.065273 CTCCCGTCACCCGATTACG 59.935 63.158 0.00 0.00 39.56 3.18
73 74 0.819582 TTCTCCCGTCACCCGATTAC 59.180 55.000 0.00 0.00 39.56 1.89
74 75 1.559368 TTTCTCCCGTCACCCGATTA 58.441 50.000 0.00 0.00 39.56 1.75
75 76 0.909623 ATTTCTCCCGTCACCCGATT 59.090 50.000 0.00 0.00 39.56 3.34
76 77 0.909623 AATTTCTCCCGTCACCCGAT 59.090 50.000 0.00 0.00 39.56 4.18
77 78 0.036765 CAATTTCTCCCGTCACCCGA 60.037 55.000 0.00 0.00 39.56 5.14
78 79 0.036765 TCAATTTCTCCCGTCACCCG 60.037 55.000 0.00 0.00 0.00 5.28
79 80 2.420058 ATCAATTTCTCCCGTCACCC 57.580 50.000 0.00 0.00 0.00 4.61
80 81 2.423538 CCAATCAATTTCTCCCGTCACC 59.576 50.000 0.00 0.00 0.00 4.02
81 82 3.127030 GTCCAATCAATTTCTCCCGTCAC 59.873 47.826 0.00 0.00 0.00 3.67
82 83 3.343617 GTCCAATCAATTTCTCCCGTCA 58.656 45.455 0.00 0.00 0.00 4.35
83 84 2.683362 GGTCCAATCAATTTCTCCCGTC 59.317 50.000 0.00 0.00 0.00 4.79
84 85 2.041081 TGGTCCAATCAATTTCTCCCGT 59.959 45.455 0.00 0.00 0.00 5.28
85 86 2.722094 TGGTCCAATCAATTTCTCCCG 58.278 47.619 0.00 0.00 0.00 5.14
86 87 4.283212 TGTTTGGTCCAATCAATTTCTCCC 59.717 41.667 12.15 0.00 0.00 4.30
87 88 5.221422 TGTGTTTGGTCCAATCAATTTCTCC 60.221 40.000 15.50 4.21 0.00 3.71
88 89 5.841810 TGTGTTTGGTCCAATCAATTTCTC 58.158 37.500 15.50 4.81 0.00 2.87
89 90 5.867903 TGTGTTTGGTCCAATCAATTTCT 57.132 34.783 15.50 0.00 0.00 2.52
90 91 5.639082 GGATGTGTTTGGTCCAATCAATTTC 59.361 40.000 15.50 12.20 32.23 2.17
91 92 5.071519 TGGATGTGTTTGGTCCAATCAATTT 59.928 36.000 15.50 5.29 38.99 1.82
92 93 4.592351 TGGATGTGTTTGGTCCAATCAATT 59.408 37.500 15.50 7.43 38.99 2.32
93 94 4.158786 TGGATGTGTTTGGTCCAATCAAT 58.841 39.130 15.50 11.56 38.99 2.57
94 95 3.570540 TGGATGTGTTTGGTCCAATCAA 58.429 40.909 15.50 8.01 38.99 2.57
95 96 3.235750 TGGATGTGTTTGGTCCAATCA 57.764 42.857 10.75 10.75 38.99 2.57
99 100 6.485830 TTAATTTTGGATGTGTTTGGTCCA 57.514 33.333 0.00 0.00 40.13 4.02
100 101 7.281100 TGTTTTAATTTTGGATGTGTTTGGTCC 59.719 33.333 0.00 0.00 0.00 4.46
101 102 8.119845 GTGTTTTAATTTTGGATGTGTTTGGTC 58.880 33.333 0.00 0.00 0.00 4.02
102 103 7.607991 TGTGTTTTAATTTTGGATGTGTTTGGT 59.392 29.630 0.00 0.00 0.00 3.67
103 104 7.978982 TGTGTTTTAATTTTGGATGTGTTTGG 58.021 30.769 0.00 0.00 0.00 3.28
104 105 9.271738 GTTGTGTTTTAATTTTGGATGTGTTTG 57.728 29.630 0.00 0.00 0.00 2.93
105 106 9.003658 TGTTGTGTTTTAATTTTGGATGTGTTT 57.996 25.926 0.00 0.00 0.00 2.83
106 107 8.553459 TGTTGTGTTTTAATTTTGGATGTGTT 57.447 26.923 0.00 0.00 0.00 3.32
119 120 5.647225 AGGGTAGTCGTTTGTTGTGTTTTAA 59.353 36.000 0.00 0.00 0.00 1.52
127 128 6.628185 AGTAGATTAGGGTAGTCGTTTGTTG 58.372 40.000 0.00 0.00 0.00 3.33
157 158 2.730069 ACGTCGTGTGAATAACGTTCA 58.270 42.857 2.82 0.00 45.21 3.18
158 159 4.612614 TCTTACGTCGTGTGAATAACGTTC 59.387 41.667 2.82 0.00 45.21 3.95
161 162 4.789629 TGATCTTACGTCGTGTGAATAACG 59.210 41.667 8.47 0.00 42.36 3.18
171 172 1.267806 ACCGTGTTGATCTTACGTCGT 59.732 47.619 2.21 2.21 36.17 4.34
175 176 3.241552 CGCTTTACCGTGTTGATCTTACG 60.242 47.826 9.11 9.11 37.55 3.18
176 177 3.922240 TCGCTTTACCGTGTTGATCTTAC 59.078 43.478 0.00 0.00 0.00 2.34
177 178 4.171005 CTCGCTTTACCGTGTTGATCTTA 58.829 43.478 0.00 0.00 0.00 2.10
182 183 0.947180 GGCTCGCTTTACCGTGTTGA 60.947 55.000 0.00 0.00 0.00 3.18
186 187 0.454600 TAGAGGCTCGCTTTACCGTG 59.545 55.000 9.22 0.00 0.00 4.94
229 230 0.895100 AAGCTCGCCCTCATTTTGCA 60.895 50.000 0.00 0.00 0.00 4.08
235 236 0.895100 TTTTGCAAGCTCGCCCTCAT 60.895 50.000 0.00 0.00 0.00 2.90
243 244 5.648572 AGCTCATCTTTATTTTGCAAGCTC 58.351 37.500 0.00 0.00 32.39 4.09
256 257 9.520515 TTAAAGTCCTTTAATGAGCTCATCTTT 57.479 29.630 28.83 27.63 39.34 2.52
258 259 8.951243 GTTTAAAGTCCTTTAATGAGCTCATCT 58.049 33.333 28.83 19.90 42.48 2.90
261 262 8.458573 TTGTTTAAAGTCCTTTAATGAGCTCA 57.541 30.769 20.79 20.79 42.48 4.26
409 421 7.108847 ACAACAAAAATGACCAATTTTCAGGA 58.891 30.769 0.00 0.00 45.73 3.86
411 423 7.697291 CCAACAACAAAAATGACCAATTTTCAG 59.303 33.333 0.00 0.00 45.73 3.02
419 431 2.420687 GCCCCAACAACAAAAATGACCA 60.421 45.455 0.00 0.00 0.00 4.02
422 434 1.757118 TCGCCCCAACAACAAAAATGA 59.243 42.857 0.00 0.00 0.00 2.57
439 453 4.739716 TGCACAAAAGAAAGAAAATCTCGC 59.260 37.500 0.00 0.00 0.00 5.03
499 513 7.559590 ACTTATGCTTATTTGTGACAGATCC 57.440 36.000 0.00 0.00 0.00 3.36
504 518 8.409371 TGTGAAAACTTATGCTTATTTGTGACA 58.591 29.630 0.00 0.00 0.00 3.58
510 524 9.830975 AAAACCTGTGAAAACTTATGCTTATTT 57.169 25.926 0.00 0.00 0.00 1.40
567 584 8.305441 ACATTTTATTTTCAAATGACCCGAAC 57.695 30.769 11.40 0.00 42.10 3.95
570 587 7.289587 GGACATTTTATTTTCAAATGACCCG 57.710 36.000 11.40 0.00 44.22 5.28
573 590 8.093927 TGGGAGGACATTTTATTTTCAAATGAC 58.906 33.333 11.40 6.00 42.10 3.06
585 602 1.065709 GGCTCGTGGGAGGACATTTTA 60.066 52.381 0.00 0.00 40.80 1.52
589 606 3.083997 GGGCTCGTGGGAGGACAT 61.084 66.667 0.00 0.00 40.80 3.06
613 630 1.742268 ACGTAGGAGAGCGAAGTTACC 59.258 52.381 0.00 0.00 0.00 2.85
651 668 3.454082 TGCCACCTTCCAAAAACAAATCT 59.546 39.130 0.00 0.00 0.00 2.40
718 1037 2.700773 GGAAACGGCACCTCCATGC 61.701 63.158 0.00 0.00 45.34 4.06
743 1062 7.542130 ACGCACATTAAAATTTCAGAGGATTTC 59.458 33.333 0.00 0.00 0.00 2.17
831 1151 1.609072 GAGGTTCTGGTGTTTTCTGCC 59.391 52.381 0.00 0.00 0.00 4.85
1163 1496 5.195940 CCATTGTCTCTCTCTCTCTCTCTT 58.804 45.833 0.00 0.00 0.00 2.85
1350 1689 1.657751 GAATCGCAGGAAGCCCCAAC 61.658 60.000 0.00 0.00 41.38 3.77
1405 1744 2.432874 TCAAGGAACGTTGGACAGAGAA 59.567 45.455 5.00 0.00 0.00 2.87
1407 1746 2.526304 TCAAGGAACGTTGGACAGAG 57.474 50.000 5.00 0.00 0.00 3.35
1417 1756 5.519566 CAGAGAGAGATTTGATCAAGGAACG 59.480 44.000 8.41 0.00 0.00 3.95
1481 1820 2.042831 CAAAGCGCAGGGAGGAAGG 61.043 63.158 11.47 0.00 0.00 3.46
1567 1908 7.771183 TGATTTATTTTCAAGGAAGGGAATCG 58.229 34.615 0.00 0.00 0.00 3.34
1640 1981 2.603021 TCCAGCCAAGCCACATTTTTA 58.397 42.857 0.00 0.00 0.00 1.52
1641 1982 1.422531 TCCAGCCAAGCCACATTTTT 58.577 45.000 0.00 0.00 0.00 1.94
1642 1983 1.648116 ATCCAGCCAAGCCACATTTT 58.352 45.000 0.00 0.00 0.00 1.82
1645 1986 1.551883 GAAAATCCAGCCAAGCCACAT 59.448 47.619 0.00 0.00 0.00 3.21
1654 1995 1.827344 CAGGGAAAGGAAAATCCAGCC 59.173 52.381 0.00 0.00 39.61 4.85
1656 1997 1.474077 CGCAGGGAAAGGAAAATCCAG 59.526 52.381 0.00 0.00 39.61 3.86
1665 2006 1.721487 CGCATTACGCAGGGAAAGG 59.279 57.895 0.00 0.00 42.60 3.11
1692 2033 6.702282 GTGAAATTTAAACGAAATTGGACCCA 59.298 34.615 0.00 0.00 45.21 4.51
1693 2034 6.926826 AGTGAAATTTAAACGAAATTGGACCC 59.073 34.615 0.00 0.00 45.21 4.46
1719 2060 5.009210 GGCGGATAAGGCATTTATACACAAA 59.991 40.000 0.00 0.00 32.87 2.83
1722 2063 3.439129 GGGCGGATAAGGCATTTATACAC 59.561 47.826 0.00 0.00 32.87 2.90
1723 2064 3.560453 GGGGCGGATAAGGCATTTATACA 60.560 47.826 0.00 0.00 32.87 2.29
1724 2065 3.014623 GGGGCGGATAAGGCATTTATAC 58.985 50.000 0.00 0.00 38.57 1.47
1726 2067 1.613255 CGGGGCGGATAAGGCATTTAT 60.613 52.381 0.00 0.00 38.57 1.40
1767 2114 0.877649 CATGTCAATCGGCGAGGAGG 60.878 60.000 17.22 4.62 0.00 4.30
1885 2274 2.589492 CGAATCGTCTGCGGGATGC 61.589 63.158 0.00 0.00 46.70 3.91
1939 2328 7.856894 TTTTGAGCCAAACAACGTAAGTAATAC 59.143 33.333 0.00 0.00 41.04 1.89
1940 2329 7.928103 TTTTGAGCCAAACAACGTAAGTAATA 58.072 30.769 0.00 0.00 41.04 0.98
1941 2330 6.797454 TTTTGAGCCAAACAACGTAAGTAAT 58.203 32.000 0.00 0.00 41.04 1.89
1942 2331 6.127952 ACTTTTGAGCCAAACAACGTAAGTAA 60.128 34.615 0.00 0.00 41.04 2.24
1951 2340 1.203523 ACGCACTTTTGAGCCAAACAA 59.796 42.857 0.52 0.00 32.79 2.83
1972 2361 2.190578 GGGCTGGGATCGTCAAGG 59.809 66.667 0.00 0.00 0.00 3.61
1996 2385 8.797266 AAACGGTGAAGAATTTGATAAAAGAC 57.203 30.769 0.00 0.00 0.00 3.01
2018 2411 5.659329 ATTGCTCCAAGTTTGGCGGAAAC 62.659 47.826 11.03 2.50 44.54 2.78
2114 2516 2.594303 CCCCTCAACGCAACAGCA 60.594 61.111 0.00 0.00 0.00 4.41
2216 2621 6.618287 TCCACAAAGAAGTTGAATGTACTG 57.382 37.500 0.00 0.00 39.87 2.74
2351 2758 3.483558 GCTTCGAGTTGCAAAAACAAGAG 59.516 43.478 0.00 0.00 0.00 2.85
2419 2827 3.253230 GGATGTAATGCAGTTTGTTGGC 58.747 45.455 0.00 0.00 33.36 4.52
2430 2842 0.663153 GGAGCCAACGGATGTAATGC 59.337 55.000 0.00 0.00 0.00 3.56
2474 2886 0.403271 AGACAGCAGGGCAGAAACAT 59.597 50.000 0.00 0.00 0.00 2.71
2506 2918 2.883572 GGAGACGAGAGCCAGGTAA 58.116 57.895 0.00 0.00 0.00 2.85
2519 2960 0.036388 TGGAACCTGCATTCGGAGAC 60.036 55.000 0.00 0.00 34.32 3.36
2523 2964 1.033746 AGCATGGAACCTGCATTCGG 61.034 55.000 14.13 0.00 42.15 4.30
2524 2965 0.099968 CAGCATGGAACCTGCATTCG 59.900 55.000 14.13 0.00 42.15 3.34
2914 3361 3.918220 GATTCCAGCAGCGACGCG 61.918 66.667 15.18 3.53 36.85 6.01
2935 3382 0.038166 TGGCATTGGAGAGGAACACC 59.962 55.000 0.00 0.00 0.00 4.16
2972 3419 5.162794 TGGAAATCACAAGCATGAAAATCG 58.837 37.500 0.00 0.00 30.82 3.34
3021 3471 5.894298 TCTAGCATCCCACTGACAATATT 57.106 39.130 0.00 0.00 0.00 1.28
3024 3474 4.458397 CAATCTAGCATCCCACTGACAAT 58.542 43.478 0.00 0.00 0.00 2.71
3163 3718 2.752030 TCCCCTCAGAGTATGTCAAGG 58.248 52.381 0.00 0.00 32.51 3.61
3171 3726 4.081309 CGGTAACAAAATCCCCTCAGAGTA 60.081 45.833 0.00 0.00 0.00 2.59
3243 3798 1.387539 GGACGGAGGGAGTAGTACAC 58.612 60.000 2.52 0.00 0.00 2.90
3248 3803 0.682209 TTTCCGGACGGAGGGAGTAG 60.682 60.000 13.64 0.00 46.06 2.57
3249 3804 0.032813 ATTTCCGGACGGAGGGAGTA 60.033 55.000 13.64 0.00 46.06 2.59
3250 3805 0.032813 TATTTCCGGACGGAGGGAGT 60.033 55.000 13.64 0.00 46.06 3.85
3251 3806 0.388294 GTATTTCCGGACGGAGGGAG 59.612 60.000 13.64 0.00 46.06 4.30
3252 3807 0.032813 AGTATTTCCGGACGGAGGGA 60.033 55.000 13.64 4.95 46.06 4.20
3253 3808 0.828677 AAGTATTTCCGGACGGAGGG 59.171 55.000 13.64 0.00 46.06 4.30
3254 3809 1.206371 ACAAGTATTTCCGGACGGAGG 59.794 52.381 13.64 0.00 46.06 4.30
3255 3810 2.094390 TGACAAGTATTTCCGGACGGAG 60.094 50.000 13.64 3.15 46.06 4.63
3256 3811 1.894466 TGACAAGTATTTCCGGACGGA 59.106 47.619 1.83 9.76 43.52 4.69
3257 3812 2.373540 TGACAAGTATTTCCGGACGG 57.626 50.000 1.83 3.96 0.00 4.79
3258 3813 3.517602 TGATGACAAGTATTTCCGGACG 58.482 45.455 1.83 0.00 0.00 4.79
3259 3814 5.873179 TTTGATGACAAGTATTTCCGGAC 57.127 39.130 1.83 0.00 37.32 4.79
3260 3815 6.657117 TCATTTTGATGACAAGTATTTCCGGA 59.343 34.615 0.00 0.00 37.32 5.14
3261 3816 6.851609 TCATTTTGATGACAAGTATTTCCGG 58.148 36.000 0.00 0.00 37.32 5.14
3262 3817 8.915871 ATTCATTTTGATGACAAGTATTTCCG 57.084 30.769 0.00 0.00 37.32 4.30
3269 3824 8.869109 TCCCTTTTATTCATTTTGATGACAAGT 58.131 29.630 0.00 0.00 37.32 3.16
3270 3825 9.709495 TTCCCTTTTATTCATTTTGATGACAAG 57.291 29.630 0.00 0.00 37.32 3.16
3272 3827 9.656040 CATTCCCTTTTATTCATTTTGATGACA 57.344 29.630 0.00 0.00 0.00 3.58
3273 3828 9.657419 ACATTCCCTTTTATTCATTTTGATGAC 57.343 29.630 0.00 0.00 0.00 3.06
3283 3838 9.693739 ACATGTACATACATTCCCTTTTATTCA 57.306 29.630 8.32 0.00 43.99 2.57
3289 3844 9.693739 TGAAATACATGTACATACATTCCCTTT 57.306 29.630 7.96 0.11 43.99 3.11
3290 3845 9.342308 CTGAAATACATGTACATACATTCCCTT 57.658 33.333 7.96 0.00 43.99 3.95
3291 3846 8.494433 ACTGAAATACATGTACATACATTCCCT 58.506 33.333 7.96 0.00 43.99 4.20
3292 3847 8.677148 ACTGAAATACATGTACATACATTCCC 57.323 34.615 7.96 7.29 43.99 3.97
3329 3884 9.381033 ACTTGTCATCAAAATGAACAAAAATGA 57.619 25.926 0.87 0.00 43.42 2.57
3339 3894 9.474920 GTCCAAAAATACTTGTCATCAAAATGA 57.525 29.630 0.00 0.00 39.63 2.57
3340 3895 9.258826 TGTCCAAAAATACTTGTCATCAAAATG 57.741 29.630 0.00 0.00 32.87 2.32
3341 3896 9.480053 CTGTCCAAAAATACTTGTCATCAAAAT 57.520 29.630 0.00 0.00 32.87 1.82
3342 3897 8.690884 TCTGTCCAAAAATACTTGTCATCAAAA 58.309 29.630 0.00 0.00 32.87 2.44
3343 3898 8.231692 TCTGTCCAAAAATACTTGTCATCAAA 57.768 30.769 0.00 0.00 32.87 2.69
3344 3899 7.040478 CCTCTGTCCAAAAATACTTGTCATCAA 60.040 37.037 0.00 0.00 0.00 2.57
3345 3900 6.430925 CCTCTGTCCAAAAATACTTGTCATCA 59.569 38.462 0.00 0.00 0.00 3.07
3346 3901 6.127897 CCCTCTGTCCAAAAATACTTGTCATC 60.128 42.308 0.00 0.00 0.00 2.92
3347 3902 5.711976 CCCTCTGTCCAAAAATACTTGTCAT 59.288 40.000 0.00 0.00 0.00 3.06
3348 3903 5.070001 CCCTCTGTCCAAAAATACTTGTCA 58.930 41.667 0.00 0.00 0.00 3.58
3349 3904 5.313712 TCCCTCTGTCCAAAAATACTTGTC 58.686 41.667 0.00 0.00 0.00 3.18
3350 3905 5.163088 ACTCCCTCTGTCCAAAAATACTTGT 60.163 40.000 0.00 0.00 0.00 3.16
3351 3906 5.316987 ACTCCCTCTGTCCAAAAATACTTG 58.683 41.667 0.00 0.00 0.00 3.16
3352 3907 5.584551 ACTCCCTCTGTCCAAAAATACTT 57.415 39.130 0.00 0.00 0.00 2.24
3353 3908 6.443849 TCATACTCCCTCTGTCCAAAAATACT 59.556 38.462 0.00 0.00 0.00 2.12
3354 3909 6.650120 TCATACTCCCTCTGTCCAAAAATAC 58.350 40.000 0.00 0.00 0.00 1.89
3355 3910 6.884472 TCATACTCCCTCTGTCCAAAAATA 57.116 37.500 0.00 0.00 0.00 1.40
3356 3911 5.779241 TCATACTCCCTCTGTCCAAAAAT 57.221 39.130 0.00 0.00 0.00 1.82
3357 3912 5.576563 TTCATACTCCCTCTGTCCAAAAA 57.423 39.130 0.00 0.00 0.00 1.94
3358 3913 5.250543 TCATTCATACTCCCTCTGTCCAAAA 59.749 40.000 0.00 0.00 0.00 2.44
3359 3914 4.782691 TCATTCATACTCCCTCTGTCCAAA 59.217 41.667 0.00 0.00 0.00 3.28
3360 3915 4.361783 TCATTCATACTCCCTCTGTCCAA 58.638 43.478 0.00 0.00 0.00 3.53
3361 3916 3.994317 TCATTCATACTCCCTCTGTCCA 58.006 45.455 0.00 0.00 0.00 4.02
3362 3917 4.407296 AGTTCATTCATACTCCCTCTGTCC 59.593 45.833 0.00 0.00 0.00 4.02
3363 3918 5.596845 GAGTTCATTCATACTCCCTCTGTC 58.403 45.833 0.00 0.00 35.78 3.51
3364 3919 4.098654 CGAGTTCATTCATACTCCCTCTGT 59.901 45.833 0.00 0.00 37.98 3.41
3365 3920 4.339530 TCGAGTTCATTCATACTCCCTCTG 59.660 45.833 0.00 0.00 37.98 3.35
3366 3921 4.537751 TCGAGTTCATTCATACTCCCTCT 58.462 43.478 0.00 0.00 37.98 3.69
3367 3922 4.339814 ACTCGAGTTCATTCATACTCCCTC 59.660 45.833 13.58 0.00 37.98 4.30
3368 3923 4.282496 ACTCGAGTTCATTCATACTCCCT 58.718 43.478 13.58 0.00 37.98 4.20
3369 3924 4.657436 ACTCGAGTTCATTCATACTCCC 57.343 45.455 13.58 0.00 37.98 4.30
3370 3925 5.631512 GCATACTCGAGTTCATTCATACTCC 59.368 44.000 25.44 0.00 37.98 3.85
3371 3926 6.209361 TGCATACTCGAGTTCATTCATACTC 58.791 40.000 25.44 3.62 37.90 2.59
3372 3927 6.149129 TGCATACTCGAGTTCATTCATACT 57.851 37.500 25.44 0.00 0.00 2.12
3373 3928 6.828502 TTGCATACTCGAGTTCATTCATAC 57.171 37.500 25.44 5.22 0.00 2.39
3374 3929 8.437360 AAATTGCATACTCGAGTTCATTCATA 57.563 30.769 25.44 2.65 0.00 2.15
3375 3930 6.932356 AATTGCATACTCGAGTTCATTCAT 57.068 33.333 25.44 6.94 0.00 2.57
3452 4009 1.072806 CTGGCCCTGAAGCATAGCATA 59.927 52.381 0.00 0.00 0.00 3.14
3661 4219 5.467035 TTTTCCAGTGCAAGGAATAAAGG 57.533 39.130 19.30 0.00 44.14 3.11
3685 4243 3.522553 GACGGAGGGAGTACTTGATTTG 58.477 50.000 0.00 0.00 0.00 2.32
3696 4254 1.339097 ATATTTCCGGACGGAGGGAG 58.661 55.000 13.64 0.00 46.06 4.30
3698 4256 2.218603 CAAATATTTCCGGACGGAGGG 58.781 52.381 13.64 0.00 46.06 4.30
3699 4257 2.870411 GACAAATATTTCCGGACGGAGG 59.130 50.000 13.64 0.00 46.06 4.30
3700 4258 3.527533 TGACAAATATTTCCGGACGGAG 58.472 45.455 13.64 3.15 46.06 4.63
3701 4259 3.613494 TGACAAATATTTCCGGACGGA 57.387 42.857 1.83 9.76 43.52 4.69
3703 4261 5.478233 TTGATGACAAATATTTCCGGACG 57.522 39.130 1.83 0.00 32.73 4.79
3705 4263 7.123397 TCCATTTTGATGACAAATATTTCCGGA 59.877 33.333 0.00 0.00 43.99 5.14
3706 4264 7.264221 TCCATTTTGATGACAAATATTTCCGG 58.736 34.615 0.00 0.00 43.99 5.14
3707 4265 8.757789 CATCCATTTTGATGACAAATATTTCCG 58.242 33.333 0.00 0.00 43.94 4.30
3708 4266 9.820725 TCATCCATTTTGATGACAAATATTTCC 57.179 29.630 0.00 0.00 44.65 3.13
3720 4278 9.772973 ATACATCCATTTTCATCCATTTTGATG 57.227 29.630 0.00 0.00 42.84 3.07
3721 4279 9.991906 GATACATCCATTTTCATCCATTTTGAT 57.008 29.630 0.00 0.00 0.00 2.57
3722 4280 9.204337 AGATACATCCATTTTCATCCATTTTGA 57.796 29.630 0.00 0.00 0.00 2.69
3728 4286 9.699410 AGTTTTAGATACATCCATTTTCATCCA 57.301 29.630 0.00 0.00 0.00 3.41
3760 4318 9.499479 GTCATTGAAATGGATGTATCTAGATGT 57.501 33.333 15.79 1.25 37.03 3.06
3761 4319 9.498176 TGTCATTGAAATGGATGTATCTAGATG 57.502 33.333 15.79 0.00 37.03 2.90
3763 4321 9.551734 CTTGTCATTGAAATGGATGTATCTAGA 57.448 33.333 0.00 0.00 37.03 2.43
3764 4322 9.334947 ACTTGTCATTGAAATGGATGTATCTAG 57.665 33.333 3.31 0.00 37.03 2.43
3766 4324 9.857656 ATACTTGTCATTGAAATGGATGTATCT 57.142 29.630 3.31 0.00 37.03 1.98
3770 4328 8.253113 GGAAATACTTGTCATTGAAATGGATGT 58.747 33.333 3.31 2.77 37.03 3.06
3771 4329 7.433131 CGGAAATACTTGTCATTGAAATGGATG 59.567 37.037 3.31 0.00 37.03 3.51
3772 4330 7.416664 CCGGAAATACTTGTCATTGAAATGGAT 60.417 37.037 0.00 0.00 37.03 3.41
3773 4331 6.127758 CCGGAAATACTTGTCATTGAAATGGA 60.128 38.462 0.00 0.00 37.03 3.41
3774 4332 6.035843 CCGGAAATACTTGTCATTGAAATGG 58.964 40.000 0.00 0.00 37.03 3.16
3775 4333 6.747280 GTCCGGAAATACTTGTCATTGAAATG 59.253 38.462 5.23 0.00 37.75 2.32
3776 4334 6.403200 CGTCCGGAAATACTTGTCATTGAAAT 60.403 38.462 5.23 0.00 0.00 2.17
3777 4335 5.106869 CGTCCGGAAATACTTGTCATTGAAA 60.107 40.000 5.23 0.00 0.00 2.69
3778 4336 4.390603 CGTCCGGAAATACTTGTCATTGAA 59.609 41.667 5.23 0.00 0.00 2.69
3779 4337 3.930229 CGTCCGGAAATACTTGTCATTGA 59.070 43.478 5.23 0.00 0.00 2.57
3780 4338 3.063452 CCGTCCGGAAATACTTGTCATTG 59.937 47.826 5.23 0.00 37.50 2.82
3781 4339 3.055675 TCCGTCCGGAAATACTTGTCATT 60.056 43.478 5.23 0.00 42.05 2.57
3782 4340 2.498481 TCCGTCCGGAAATACTTGTCAT 59.502 45.455 5.23 0.00 42.05 3.06
3783 4341 1.894466 TCCGTCCGGAAATACTTGTCA 59.106 47.619 5.23 0.00 42.05 3.58
3784 4342 2.537401 CTCCGTCCGGAAATACTTGTC 58.463 52.381 5.23 0.00 44.66 3.18
3785 4343 1.206371 CCTCCGTCCGGAAATACTTGT 59.794 52.381 5.23 0.00 44.66 3.16
3786 4344 1.472728 CCCTCCGTCCGGAAATACTTG 60.473 57.143 5.23 0.00 44.66 3.16
3787 4345 0.828677 CCCTCCGTCCGGAAATACTT 59.171 55.000 5.23 0.00 44.66 2.24
3788 4346 0.032813 TCCCTCCGTCCGGAAATACT 60.033 55.000 5.23 0.00 44.66 2.12
3789 4347 0.388294 CTCCCTCCGTCCGGAAATAC 59.612 60.000 5.23 0.00 44.66 1.89
3790 4348 0.032813 ACTCCCTCCGTCCGGAAATA 60.033 55.000 5.23 0.00 44.66 1.40
3791 4349 0.032813 TACTCCCTCCGTCCGGAAAT 60.033 55.000 5.23 0.00 44.66 2.17
3792 4350 0.251742 TTACTCCCTCCGTCCGGAAA 60.252 55.000 5.23 0.00 44.66 3.13
3793 4351 0.032813 ATTACTCCCTCCGTCCGGAA 60.033 55.000 5.23 0.00 44.66 4.30
3794 4352 0.846015 TATTACTCCCTCCGTCCGGA 59.154 55.000 0.00 0.00 42.90 5.14
3795 4353 1.245732 CTATTACTCCCTCCGTCCGG 58.754 60.000 0.00 0.00 0.00 5.14
3796 4354 0.597072 GCTATTACTCCCTCCGTCCG 59.403 60.000 0.00 0.00 0.00 4.79
3797 4355 1.700955 TGCTATTACTCCCTCCGTCC 58.299 55.000 0.00 0.00 0.00 4.79
3798 4356 5.411781 CATAATGCTATTACTCCCTCCGTC 58.588 45.833 0.00 0.00 0.00 4.79
3799 4357 4.322801 GCATAATGCTATTACTCCCTCCGT 60.323 45.833 0.00 0.00 40.96 4.69
3800 4358 4.184629 GCATAATGCTATTACTCCCTCCG 58.815 47.826 0.00 0.00 40.96 4.63
3840 4398 0.404040 GTGGAACATCTCCCCCACAA 59.596 55.000 0.00 0.00 46.13 3.33
3891 4462 8.454894 GGATGAGGATAAGAAGAAAAACTCAAC 58.545 37.037 0.00 0.00 37.29 3.18
3916 4487 3.119173 ACATTTCAAATGTGGGTATGCGG 60.119 43.478 15.20 0.00 0.00 5.69
3926 4497 8.878769 GTCACAAAAGGTAAACATTTCAAATGT 58.121 29.630 10.14 10.14 0.00 2.71
3962 4533 7.852263 ACACTGAAAAATAGTCAGCTATACCT 58.148 34.615 1.41 0.00 45.35 3.08
3970 4541 7.977904 TCATGCATACACTGAAAAATAGTCAG 58.022 34.615 0.00 0.00 46.59 3.51
4042 4613 3.313012 GTGCCCCCACTATTTGAAAAC 57.687 47.619 0.00 0.00 38.93 2.43
4118 4760 7.781056 CCAACAATAATGGTAAACAGGCTTAT 58.219 34.615 0.00 0.00 33.08 1.73
4155 4797 8.989980 GTACTTACAAAGCTGTCTTTCACTTAT 58.010 33.333 0.00 0.00 40.35 1.73
4169 4813 6.178239 CCATGTTGGTAGTACTTACAAAGC 57.822 41.667 0.00 0.00 33.73 3.51
4229 4873 8.933955 CATTCACTGCGTTAACGAAAATATAAG 58.066 33.333 31.03 9.75 43.02 1.73
4233 4877 6.073711 TGTCATTCACTGCGTTAACGAAAATA 60.074 34.615 31.03 10.14 43.02 1.40
4239 4884 2.475111 ACTGTCATTCACTGCGTTAACG 59.525 45.455 23.40 23.40 43.27 3.18
4240 4885 4.468095 AACTGTCATTCACTGCGTTAAC 57.532 40.909 0.00 0.00 0.00 2.01
4303 4987 2.684881 GTTTCATACCATCAGCCACAGG 59.315 50.000 0.00 0.00 0.00 4.00
4346 5031 6.127451 ACGAGGGAATTCAAAAGTTTTGTTCT 60.127 34.615 24.00 14.38 0.00 3.01
4354 5039 4.100279 AGGAACGAGGGAATTCAAAAGT 57.900 40.909 7.93 0.00 0.00 2.66
4356 5041 4.037446 CACAAGGAACGAGGGAATTCAAAA 59.963 41.667 7.93 0.00 0.00 2.44
4382 5067 3.192212 CCTGAAGGCAAAGGAAGATGTTC 59.808 47.826 0.00 0.00 35.40 3.18
4383 5068 3.160269 CCTGAAGGCAAAGGAAGATGTT 58.840 45.455 0.00 0.00 35.40 2.71
4405 5092 2.234661 TGCTGACTGTTGGGTAGAGATG 59.765 50.000 0.00 0.00 0.00 2.90
4592 5279 3.360340 GTGGCACTGTCAGCTGGC 61.360 66.667 12.53 12.53 0.00 4.85
4593 5280 3.046087 CGTGGCACTGTCAGCTGG 61.046 66.667 15.13 0.00 0.00 4.85
4691 5378 4.715523 GCCACCGCTGCAGGGTAA 62.716 66.667 26.94 0.00 35.58 2.85
4973 5660 0.179187 CGTTGTTGTTGTTGTCCGCA 60.179 50.000 0.00 0.00 0.00 5.69
5159 5846 4.373116 GACTCGAACCGGGCAGCA 62.373 66.667 6.32 0.00 0.00 4.41
5162 5849 3.379445 GGAGACTCGAACCGGGCA 61.379 66.667 6.32 0.00 0.00 5.36
5183 5870 4.760047 GTGACATCCACGCCGCCT 62.760 66.667 0.00 0.00 35.86 5.52
5340 6027 6.597672 TCTTTCTAAACGAACATATGGTGCAT 59.402 34.615 7.80 0.00 0.00 3.96
5341 6028 5.935206 TCTTTCTAAACGAACATATGGTGCA 59.065 36.000 7.80 0.00 0.00 4.57
5342 6029 6.417191 TCTTTCTAAACGAACATATGGTGC 57.583 37.500 7.80 0.00 0.00 5.01
5351 6038 7.513041 GCACACACATTTTCTTTCTAAACGAAC 60.513 37.037 0.00 0.00 0.00 3.95
5359 6048 5.779529 ATGAGCACACACATTTTCTTTCT 57.220 34.783 0.00 0.00 0.00 2.52
5360 6049 6.833342 AAATGAGCACACACATTTTCTTTC 57.167 33.333 0.00 0.00 42.22 2.62
5393 6090 4.579869 GACTCCAGCTTCCTGAAACATTA 58.420 43.478 0.00 0.00 41.77 1.90
5565 6262 2.473530 TTCGTGTTTCTGACGTACGT 57.526 45.000 23.04 23.04 38.04 3.57
5566 6263 2.024875 CGATTCGTGTTTCTGACGTACG 59.975 50.000 15.01 15.01 38.04 3.67
5567 6264 3.057350 GTCGATTCGTGTTTCTGACGTAC 59.943 47.826 5.89 0.00 38.04 3.67
5568 6265 3.058708 AGTCGATTCGTGTTTCTGACGTA 60.059 43.478 5.89 0.00 38.04 3.57
5574 6271 3.991367 AGGAAAGTCGATTCGTGTTTCT 58.009 40.909 22.82 11.97 33.62 2.52
5578 6275 2.036733 TCCAAGGAAAGTCGATTCGTGT 59.963 45.455 5.89 0.00 0.00 4.49
5581 6278 1.661112 GCTCCAAGGAAAGTCGATTCG 59.339 52.381 0.00 0.00 0.00 3.34
5587 6284 4.327680 ACTACATTGCTCCAAGGAAAGTC 58.672 43.478 0.00 0.00 30.48 3.01
5599 6296 8.577296 CATACCTACATACAGTACTACATTGCT 58.423 37.037 0.00 0.00 0.00 3.91
5600 6297 7.813148 CCATACCTACATACAGTACTACATTGC 59.187 40.741 0.00 0.00 0.00 3.56
5601 6298 7.813148 GCCATACCTACATACAGTACTACATTG 59.187 40.741 0.00 0.00 0.00 2.82
5602 6299 7.507956 TGCCATACCTACATACAGTACTACATT 59.492 37.037 0.00 0.00 0.00 2.71
5603 6300 7.008332 TGCCATACCTACATACAGTACTACAT 58.992 38.462 0.00 0.00 0.00 2.29
5604 6301 6.367161 TGCCATACCTACATACAGTACTACA 58.633 40.000 0.00 0.00 0.00 2.74
5605 6302 6.713903 TCTGCCATACCTACATACAGTACTAC 59.286 42.308 0.00 0.00 0.00 2.73
5606 6303 6.713903 GTCTGCCATACCTACATACAGTACTA 59.286 42.308 0.00 0.00 0.00 1.82
5609 6306 5.702266 AGTCTGCCATACCTACATACAGTA 58.298 41.667 0.00 0.00 0.00 2.74
5611 6308 4.830046 AGAGTCTGCCATACCTACATACAG 59.170 45.833 0.00 0.00 0.00 2.74
5622 6319 2.560105 CGATCCATGAGAGTCTGCCATA 59.440 50.000 0.00 0.00 0.00 2.74
5646 6343 1.617018 TAGCTCCTGCGATGCAAGGT 61.617 55.000 2.14 0.00 45.42 3.50
6220 6955 0.824759 CCTCTAAACCGACCCTCCTG 59.175 60.000 0.00 0.00 0.00 3.86
6227 6962 5.526506 TCTAATTAGCCCTCTAAACCGAC 57.473 43.478 7.67 0.00 38.21 4.79
6313 7049 9.295825 TGTAGCAGGAAGATGAAAAAGAAAATA 57.704 29.630 0.00 0.00 0.00 1.40
6320 7059 6.293407 CGAACTTGTAGCAGGAAGATGAAAAA 60.293 38.462 0.00 0.00 0.00 1.94
6349 7088 6.046593 TCGCTAACGATACATGGAGAAAATT 58.953 36.000 0.00 0.00 45.12 1.82
6351 7090 5.001237 TCGCTAACGATACATGGAGAAAA 57.999 39.130 0.00 0.00 45.12 2.29
6536 7279 6.627395 TGGCGTTCTTTGAAAAAGATAAGA 57.373 33.333 3.43 0.00 0.00 2.10
6537 7280 7.083858 TGATGGCGTTCTTTGAAAAAGATAAG 58.916 34.615 3.43 0.80 0.00 1.73
6538 7281 6.976088 TGATGGCGTTCTTTGAAAAAGATAA 58.024 32.000 3.43 0.00 0.00 1.75
6539 7282 6.567687 TGATGGCGTTCTTTGAAAAAGATA 57.432 33.333 3.43 0.00 0.00 1.98
6540 7283 5.452078 TGATGGCGTTCTTTGAAAAAGAT 57.548 34.783 3.43 0.00 0.00 2.40
6541 7284 4.909696 TGATGGCGTTCTTTGAAAAAGA 57.090 36.364 0.00 0.00 0.00 2.52
6559 7543 0.181350 GTCTTCGCCAAGGGGATGAT 59.819 55.000 19.74 0.00 40.98 2.45
6560 7544 0.909610 AGTCTTCGCCAAGGGGATGA 60.910 55.000 14.96 14.96 38.33 2.92
6569 7553 1.275010 TGCAGATTGTAGTCTTCGCCA 59.725 47.619 0.00 0.00 0.00 5.69
6620 7604 4.335037 GCTCCTTAGGATTGCTTTGAGAAG 59.665 45.833 0.00 0.00 35.92 2.85
6621 7605 4.018960 AGCTCCTTAGGATTGCTTTGAGAA 60.019 41.667 8.94 0.00 30.55 2.87
6661 7645 0.039256 TCAAATGTTTGCGCCTGCTC 60.039 50.000 4.18 0.00 43.34 4.26
6711 7695 3.632643 TGGTGCATCAATAGAAGCTGA 57.367 42.857 0.00 0.00 39.15 4.26
6788 9254 4.526970 CCTGTGGAGCTTATGGTTGTTAT 58.473 43.478 0.00 0.00 0.00 1.89
6809 9275 4.994907 AAACTTGGTCACTTGTAAACCC 57.005 40.909 0.00 0.00 31.78 4.11
6816 9282 5.811399 TGAACAGTAAACTTGGTCACTTG 57.189 39.130 0.00 0.00 0.00 3.16
6876 9370 7.554118 AGGATGTTAATCTGTCGATGTTCAATT 59.446 33.333 0.00 0.00 32.95 2.32
6878 9372 6.313658 CAGGATGTTAATCTGTCGATGTTCAA 59.686 38.462 0.00 0.00 32.95 2.69
6879 9373 5.812127 CAGGATGTTAATCTGTCGATGTTCA 59.188 40.000 0.00 0.00 32.95 3.18
6880 9374 5.277058 GCAGGATGTTAATCTGTCGATGTTC 60.277 44.000 0.00 0.00 39.31 3.18
6881 9375 4.572389 GCAGGATGTTAATCTGTCGATGTT 59.428 41.667 0.00 0.00 39.31 2.71
6882 9376 4.122776 GCAGGATGTTAATCTGTCGATGT 58.877 43.478 0.00 0.00 39.31 3.06
6885 9379 3.885724 TGCAGGATGTTAATCTGTCGA 57.114 42.857 0.00 0.00 39.31 4.20
6886 9380 4.944962 TTTGCAGGATGTTAATCTGTCG 57.055 40.909 0.00 0.00 39.31 4.35
6887 9381 8.538409 AAAATTTTGCAGGATGTTAATCTGTC 57.462 30.769 1.75 0.00 39.31 3.51
6949 9443 2.621668 GCCCCAAAATTCTAGCTGGACT 60.622 50.000 0.00 0.00 0.00 3.85
6950 9444 1.751351 GCCCCAAAATTCTAGCTGGAC 59.249 52.381 0.00 0.00 0.00 4.02
6951 9445 1.357420 TGCCCCAAAATTCTAGCTGGA 59.643 47.619 0.00 0.00 0.00 3.86
6952 9446 1.478105 GTGCCCCAAAATTCTAGCTGG 59.522 52.381 0.00 0.00 0.00 4.85
6954 9448 2.171003 GTGTGCCCCAAAATTCTAGCT 58.829 47.619 0.00 0.00 0.00 3.32
6955 9449 1.892474 TGTGTGCCCCAAAATTCTAGC 59.108 47.619 0.00 0.00 0.00 3.42
6956 9450 6.469782 AATATGTGTGCCCCAAAATTCTAG 57.530 37.500 0.00 0.00 0.00 2.43
6957 9451 6.212388 ACAAATATGTGTGCCCCAAAATTCTA 59.788 34.615 0.00 0.00 38.69 2.10
6959 9453 5.244755 ACAAATATGTGTGCCCCAAAATTC 58.755 37.500 0.00 0.00 38.69 2.17
6961 9455 4.906747 ACAAATATGTGTGCCCCAAAAT 57.093 36.364 0.00 0.00 38.69 1.82
6962 9456 4.696479 AACAAATATGTGTGCCCCAAAA 57.304 36.364 0.00 0.00 40.46 2.44
6963 9457 4.696479 AAACAAATATGTGTGCCCCAAA 57.304 36.364 0.00 0.00 40.46 3.28
6964 9458 4.141620 ACAAAACAAATATGTGTGCCCCAA 60.142 37.500 0.00 0.00 40.46 4.12
6965 9459 3.389329 ACAAAACAAATATGTGTGCCCCA 59.611 39.130 0.00 0.00 40.46 4.96
6966 9460 4.001618 ACAAAACAAATATGTGTGCCCC 57.998 40.909 0.00 0.00 40.46 5.80
6967 9461 4.213059 CCAACAAAACAAATATGTGTGCCC 59.787 41.667 0.00 0.00 40.46 5.36
6968 9462 4.319405 GCCAACAAAACAAATATGTGTGCC 60.319 41.667 0.00 0.00 40.46 5.01
6969 9463 4.272018 TGCCAACAAAACAAATATGTGTGC 59.728 37.500 0.00 0.00 40.46 4.57
6970 9464 5.292834 TGTGCCAACAAAACAAATATGTGTG 59.707 36.000 0.00 0.00 34.70 3.82
6971 9465 5.293079 GTGTGCCAACAAAACAAATATGTGT 59.707 36.000 0.00 0.00 37.74 3.72
6972 9466 5.292834 TGTGTGCCAACAAAACAAATATGTG 59.707 36.000 0.00 0.00 37.74 3.21
6973 9467 5.293079 GTGTGTGCCAACAAAACAAATATGT 59.707 36.000 0.00 0.00 38.81 2.29
6974 9468 5.277250 GGTGTGTGCCAACAAAACAAATATG 60.277 40.000 0.00 0.00 38.27 1.78
6975 9469 4.813697 GGTGTGTGCCAACAAAACAAATAT 59.186 37.500 0.00 0.00 38.27 1.28
6976 9470 4.184629 GGTGTGTGCCAACAAAACAAATA 58.815 39.130 0.00 0.00 38.27 1.40
6977 9471 3.006247 GGTGTGTGCCAACAAAACAAAT 58.994 40.909 0.00 0.00 38.27 2.32
6978 9472 2.224281 TGGTGTGTGCCAACAAAACAAA 60.224 40.909 0.00 0.00 38.33 2.83
6979 9473 1.344438 TGGTGTGTGCCAACAAAACAA 59.656 42.857 0.00 0.00 38.33 2.83
6980 9474 0.969149 TGGTGTGTGCCAACAAAACA 59.031 45.000 0.00 0.00 39.00 2.83
6981 9475 1.067213 AGTGGTGTGTGCCAACAAAAC 60.067 47.619 0.00 0.00 43.97 2.43
6982 9476 1.261480 AGTGGTGTGTGCCAACAAAA 58.739 45.000 0.00 0.00 43.97 2.44
6983 9477 1.746220 GTAGTGGTGTGTGCCAACAAA 59.254 47.619 0.00 0.00 43.97 2.83
6984 9478 1.340114 TGTAGTGGTGTGTGCCAACAA 60.340 47.619 0.00 0.00 43.97 2.83
6985 9479 0.253327 TGTAGTGGTGTGTGCCAACA 59.747 50.000 0.00 0.00 40.68 3.33
6986 9480 0.944386 CTGTAGTGGTGTGTGCCAAC 59.056 55.000 0.00 0.00 40.68 3.77
6987 9481 0.833949 TCTGTAGTGGTGTGTGCCAA 59.166 50.000 0.00 0.00 40.68 4.52
6988 9482 1.055849 ATCTGTAGTGGTGTGTGCCA 58.944 50.000 0.00 0.00 35.93 4.92
7009 9503 5.356470 TCCTTCAAATTTTGCCACAAAAAGG 59.644 36.000 9.32 13.43 32.81 3.11
7015 9509 4.686191 ACATCCTTCAAATTTTGCCACA 57.314 36.364 4.19 0.00 0.00 4.17
7030 9524 5.363580 ACATCAACAAGTTTTCCAACATCCT 59.636 36.000 0.00 0.00 35.05 3.24
7065 9559 6.208599 TCCGCAAGAAGAGTAAATTCCAAAAT 59.791 34.615 0.00 0.00 43.02 1.82
7070 9564 4.496507 GCATCCGCAAGAAGAGTAAATTCC 60.497 45.833 0.00 0.00 43.02 3.01
7098 9593 6.458232 AAGTGTTACTCTAATCTCGAGCAT 57.542 37.500 7.81 0.88 31.71 3.79
7137 9632 8.833231 ACGAAAGAAAGAGAAGAATGATGTAA 57.167 30.769 0.00 0.00 0.00 2.41
7161 9656 5.577164 TGTGCTCTTTCGAAGATTTAGCTAC 59.423 40.000 15.47 12.89 36.82 3.58
7173 9673 2.011222 ACCGTTTTTGTGCTCTTTCGA 58.989 42.857 0.00 0.00 0.00 3.71


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.