Multiple sequence alignment - TraesCS2B01G351300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G351300 chr2B 100.000 4833 0 0 1 4833 499553582 499548750 0.000000e+00 8925.0
1 TraesCS2B01G351300 chr2B 97.297 111 3 0 634 744 612680162 612680052 6.390000e-44 189.0
2 TraesCS2B01G351300 chr2B 89.474 57 6 0 519 575 259028465 259028409 6.710000e-09 73.1
3 TraesCS2B01G351300 chr2D 94.981 3148 133 10 773 3896 424652050 424648904 0.000000e+00 4915.0
4 TraesCS2B01G351300 chr2D 93.250 637 38 5 1 636 424652880 424652248 0.000000e+00 933.0
5 TraesCS2B01G351300 chr2D 88.077 260 10 6 4149 4389 424648285 424648028 6.120000e-74 289.0
6 TraesCS2B01G351300 chr2D 96.429 112 4 0 633 744 567001900 567001789 8.260000e-43 185.0
7 TraesCS2B01G351300 chr2D 76.404 178 22 10 400 575 205004272 205004113 1.440000e-10 78.7
8 TraesCS2B01G351300 chr2A 94.057 3180 143 17 744 3891 563938021 563941186 0.000000e+00 4783.0
9 TraesCS2B01G351300 chr2A 92.749 331 19 2 2321 2646 769528539 769528869 1.570000e-129 473.0
10 TraesCS2B01G351300 chr2A 91.916 334 22 2 2324 2652 4055750 4055417 3.410000e-126 462.0
11 TraesCS2B01G351300 chr2A 89.583 336 25 4 80 412 563937420 563937748 7.480000e-113 418.0
12 TraesCS2B01G351300 chr2A 88.496 226 25 1 411 636 563937798 563938022 6.160000e-69 272.0
13 TraesCS2B01G351300 chr2A 93.671 158 9 1 4136 4293 563941605 563941761 8.090000e-58 235.0
14 TraesCS2B01G351300 chr2A 91.057 123 10 1 4615 4736 563942338 563942460 1.080000e-36 165.0
15 TraesCS2B01G351300 chr2A 97.101 69 2 0 1 69 563935540 563935608 3.060000e-22 117.0
16 TraesCS2B01G351300 chr3A 91.916 334 22 2 2324 2652 706561811 706561478 3.410000e-126 462.0
17 TraesCS2B01G351300 chr3A 95.614 114 5 0 635 748 697840808 697840695 2.970000e-42 183.0
18 TraesCS2B01G351300 chr1A 94.295 298 13 2 2324 2617 569701375 569701078 2.050000e-123 453.0
19 TraesCS2B01G351300 chr1A 94.276 297 14 1 2324 2617 569659565 569659269 7.380000e-123 451.0
20 TraesCS2B01G351300 chr1A 93.603 297 16 1 2324 2617 569741313 569741017 1.600000e-119 440.0
21 TraesCS2B01G351300 chr1A 82.051 78 3 2 3893 3959 45583295 45583218 6.760000e-04 56.5
22 TraesCS2B01G351300 chr1A 82.051 78 3 2 3893 3959 145890693 145890616 6.760000e-04 56.5
23 TraesCS2B01G351300 chr4A 94.000 300 15 1 2321 2617 624483251 624483550 7.380000e-123 451.0
24 TraesCS2B01G351300 chr3B 96.522 115 3 1 637 750 217773167 217773281 6.390000e-44 189.0
25 TraesCS2B01G351300 chr3B 94.872 39 2 0 3894 3932 187147077 187147115 1.450000e-05 62.1
26 TraesCS2B01G351300 chr6D 96.460 113 4 0 638 750 343556370 343556258 2.300000e-43 187.0
27 TraesCS2B01G351300 chr7B 94.262 122 6 1 637 757 559142302 559142181 8.260000e-43 185.0
28 TraesCS2B01G351300 chr7B 95.614 114 5 0 634 747 735033883 735033996 2.970000e-42 183.0
29 TraesCS2B01G351300 chr1B 95.614 114 5 0 635 748 461665022 461664909 2.970000e-42 183.0
30 TraesCS2B01G351300 chr5B 92.562 121 9 0 638 758 666202099 666201979 1.790000e-39 174.0
31 TraesCS2B01G351300 chr5B 80.412 97 18 1 511 606 665992572 665992668 6.710000e-09 73.1
32 TraesCS2B01G351300 chr4D 89.583 48 0 1 3893 3935 440036054 440036007 6.760000e-04 56.5
33 TraesCS2B01G351300 chr3D 89.583 48 0 1 3893 3935 418123434 418123387 6.760000e-04 56.5
34 TraesCS2B01G351300 chr1D 100.000 30 0 0 7 36 488350446 488350417 6.760000e-04 56.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G351300 chr2B 499548750 499553582 4832 True 8925.000000 8925 100.000000 1 4833 1 chr2B.!!$R2 4832
1 TraesCS2B01G351300 chr2D 424648028 424652880 4852 True 2045.666667 4915 92.102667 1 4389 3 chr2D.!!$R3 4388
2 TraesCS2B01G351300 chr2A 563935540 563942460 6920 False 998.333333 4783 92.327500 1 4736 6 chr2A.!!$F2 4735

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
723 2580 1.066858 ACATCCATTTCAGCGACGAGT 60.067 47.619 0.00 0.0 0.00 4.18 F
1616 3651 0.329261 AGCTCTGCCATGCTTACCAA 59.671 50.000 0.00 0.0 35.86 3.67 F
2959 5010 0.179034 CCCTCTGGCCTCTATTGTGC 60.179 60.000 3.32 0.0 0.00 4.57 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2590 4628 2.028020 AGCACTGGAGCTGTAACTAACC 60.028 50.0 0.0 0.0 44.66 2.85 R
3400 5451 0.976073 ATTCTCATGTCGTCCCCGGT 60.976 55.0 0.0 0.0 33.95 5.28 R
4502 7154 0.173708 CTTGTAGACGGAGGGAGCAC 59.826 60.0 0.0 0.0 0.00 4.40 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
255 2060 9.178758 GAACTATATTCAGGTGGACAATCTTTT 57.821 33.333 0.00 0.00 0.00 2.27
263 2068 3.005791 GGTGGACAATCTTTTCTTGGTGG 59.994 47.826 0.00 0.00 0.00 4.61
320 2125 7.750229 ACGAAACATTATTATGCATGGAGAT 57.250 32.000 10.16 0.87 35.03 2.75
369 2175 8.655970 GTGCCAAAATCACAAATTAAATAGGAC 58.344 33.333 0.00 0.00 34.73 3.85
421 2278 4.339530 GGGCCTCTTTGATACAAAGGATTC 59.660 45.833 19.43 10.24 0.00 2.52
485 2342 3.743911 TCTACGTGCATTGTTTGATTCGT 59.256 39.130 0.00 0.00 34.09 3.85
500 2357 1.295792 TTCGTAGGAATGCAATCCGC 58.704 50.000 15.17 11.09 44.60 5.54
542 2399 9.300681 AGGATTCATTTGTTCTAGATTTCACAA 57.699 29.630 4.02 4.02 0.00 3.33
586 2443 6.126863 ACCTCATGTGAAAATTCCTCTGTA 57.873 37.500 0.00 0.00 0.00 2.74
592 2449 7.890127 TCATGTGAAAATTCCTCTGTATTCCTT 59.110 33.333 0.00 0.00 0.00 3.36
594 2451 7.885297 TGTGAAAATTCCTCTGTATTCCTTTG 58.115 34.615 0.00 0.00 0.00 2.77
636 2493 3.331591 ACATGGCATCCTATTCCTGCATA 59.668 43.478 0.00 0.00 37.64 3.14
637 2494 4.017775 ACATGGCATCCTATTCCTGCATAT 60.018 41.667 0.00 0.00 37.64 1.78
638 2495 5.192321 ACATGGCATCCTATTCCTGCATATA 59.808 40.000 0.00 0.00 37.64 0.86
639 2496 5.102953 TGGCATCCTATTCCTGCATATAC 57.897 43.478 0.00 0.00 37.64 1.47
640 2497 4.784838 TGGCATCCTATTCCTGCATATACT 59.215 41.667 0.00 0.00 37.64 2.12
641 2498 5.104776 TGGCATCCTATTCCTGCATATACTC 60.105 44.000 0.00 0.00 37.64 2.59
642 2499 5.363939 GCATCCTATTCCTGCATATACTCC 58.636 45.833 0.00 0.00 35.96 3.85
643 2500 5.686124 GCATCCTATTCCTGCATATACTCCC 60.686 48.000 0.00 0.00 35.96 4.30
644 2501 5.291100 TCCTATTCCTGCATATACTCCCT 57.709 43.478 0.00 0.00 0.00 4.20
645 2502 5.273208 TCCTATTCCTGCATATACTCCCTC 58.727 45.833 0.00 0.00 0.00 4.30
646 2503 4.407296 CCTATTCCTGCATATACTCCCTCC 59.593 50.000 0.00 0.00 0.00 4.30
647 2504 1.924731 TCCTGCATATACTCCCTCCG 58.075 55.000 0.00 0.00 0.00 4.63
648 2505 1.147191 TCCTGCATATACTCCCTCCGT 59.853 52.381 0.00 0.00 0.00 4.69
649 2506 1.971357 CCTGCATATACTCCCTCCGTT 59.029 52.381 0.00 0.00 0.00 4.44
650 2507 2.368875 CCTGCATATACTCCCTCCGTTT 59.631 50.000 0.00 0.00 0.00 3.60
651 2508 3.555168 CCTGCATATACTCCCTCCGTTTC 60.555 52.174 0.00 0.00 0.00 2.78
652 2509 2.035449 TGCATATACTCCCTCCGTTTCG 59.965 50.000 0.00 0.00 0.00 3.46
653 2510 2.295349 GCATATACTCCCTCCGTTTCGA 59.705 50.000 0.00 0.00 0.00 3.71
654 2511 3.243636 GCATATACTCCCTCCGTTTCGAA 60.244 47.826 0.00 0.00 0.00 3.71
655 2512 4.560919 GCATATACTCCCTCCGTTTCGAAT 60.561 45.833 0.00 0.00 0.00 3.34
656 2513 5.539048 CATATACTCCCTCCGTTTCGAATT 58.461 41.667 0.00 0.00 0.00 2.17
657 2514 6.684686 CATATACTCCCTCCGTTTCGAATTA 58.315 40.000 0.00 0.00 0.00 1.40
658 2515 3.242549 ACTCCCTCCGTTTCGAATTAC 57.757 47.619 0.00 0.00 0.00 1.89
659 2516 2.830321 ACTCCCTCCGTTTCGAATTACT 59.170 45.455 0.00 0.00 0.00 2.24
660 2517 3.260128 ACTCCCTCCGTTTCGAATTACTT 59.740 43.478 0.00 0.00 0.00 2.24
661 2518 3.592059 TCCCTCCGTTTCGAATTACTTG 58.408 45.455 0.00 0.00 0.00 3.16
662 2519 3.007182 TCCCTCCGTTTCGAATTACTTGT 59.993 43.478 0.00 0.00 0.00 3.16
663 2520 3.370061 CCCTCCGTTTCGAATTACTTGTC 59.630 47.826 0.00 0.00 0.00 3.18
664 2521 3.060363 CCTCCGTTTCGAATTACTTGTCG 59.940 47.826 0.00 0.00 38.62 4.35
665 2522 2.409378 TCCGTTTCGAATTACTTGTCGC 59.591 45.455 0.00 0.00 37.19 5.19
666 2523 2.156117 CCGTTTCGAATTACTTGTCGCA 59.844 45.455 0.00 0.00 37.19 5.10
667 2524 3.181524 CCGTTTCGAATTACTTGTCGCAT 60.182 43.478 0.00 0.00 37.19 4.73
668 2525 3.773549 CGTTTCGAATTACTTGTCGCATG 59.226 43.478 0.00 0.00 37.19 4.06
669 2526 4.665645 CGTTTCGAATTACTTGTCGCATGT 60.666 41.667 0.00 4.39 37.19 3.21
670 2527 5.443562 CGTTTCGAATTACTTGTCGCATGTA 60.444 40.000 0.00 2.87 37.19 2.29
671 2528 6.475207 GTTTCGAATTACTTGTCGCATGTAT 58.525 36.000 0.00 0.00 37.19 2.29
672 2529 5.635549 TCGAATTACTTGTCGCATGTATG 57.364 39.130 0.00 0.00 37.19 2.39
673 2530 4.506288 TCGAATTACTTGTCGCATGTATGG 59.494 41.667 0.00 0.00 37.19 2.74
674 2531 4.506288 CGAATTACTTGTCGCATGTATGGA 59.494 41.667 0.00 0.00 0.00 3.41
675 2532 5.177511 CGAATTACTTGTCGCATGTATGGAT 59.822 40.000 0.00 0.00 0.00 3.41
676 2533 5.929697 ATTACTTGTCGCATGTATGGATG 57.070 39.130 0.00 0.00 0.00 3.51
677 2534 3.266510 ACTTGTCGCATGTATGGATGT 57.733 42.857 0.00 0.00 0.00 3.06
678 2535 4.400529 ACTTGTCGCATGTATGGATGTA 57.599 40.909 0.00 0.00 0.00 2.29
679 2536 4.960938 ACTTGTCGCATGTATGGATGTAT 58.039 39.130 0.00 0.00 0.00 2.29
680 2537 4.991056 ACTTGTCGCATGTATGGATGTATC 59.009 41.667 0.00 0.00 0.00 2.24
681 2538 4.871933 TGTCGCATGTATGGATGTATCT 57.128 40.909 0.00 0.00 0.00 1.98
682 2539 5.975693 TGTCGCATGTATGGATGTATCTA 57.024 39.130 0.00 0.00 0.00 1.98
683 2540 5.954335 TGTCGCATGTATGGATGTATCTAG 58.046 41.667 0.00 0.00 0.00 2.43
684 2541 5.710099 TGTCGCATGTATGGATGTATCTAGA 59.290 40.000 0.00 0.00 0.00 2.43
685 2542 6.378280 TGTCGCATGTATGGATGTATCTAGAT 59.622 38.462 10.73 10.73 0.00 1.98
686 2543 6.694844 GTCGCATGTATGGATGTATCTAGATG 59.305 42.308 15.79 0.00 0.00 2.90
687 2544 6.378280 TCGCATGTATGGATGTATCTAGATGT 59.622 38.462 15.79 1.25 0.00 3.06
688 2545 7.556275 TCGCATGTATGGATGTATCTAGATGTA 59.444 37.037 15.79 4.44 0.00 2.29
689 2546 8.355913 CGCATGTATGGATGTATCTAGATGTAT 58.644 37.037 15.79 9.11 0.00 2.29
717 2574 7.251704 AGTTTTAGATACATCCATTTCAGCG 57.748 36.000 0.00 0.00 0.00 5.18
718 2575 7.047891 AGTTTTAGATACATCCATTTCAGCGA 58.952 34.615 0.00 0.00 0.00 4.93
719 2576 6.844696 TTTAGATACATCCATTTCAGCGAC 57.155 37.500 0.00 0.00 0.00 5.19
720 2577 3.384668 AGATACATCCATTTCAGCGACG 58.615 45.455 0.00 0.00 0.00 5.12
721 2578 2.951457 TACATCCATTTCAGCGACGA 57.049 45.000 0.00 0.00 0.00 4.20
722 2579 1.645034 ACATCCATTTCAGCGACGAG 58.355 50.000 0.00 0.00 0.00 4.18
723 2580 1.066858 ACATCCATTTCAGCGACGAGT 60.067 47.619 0.00 0.00 0.00 4.18
724 2581 2.165641 ACATCCATTTCAGCGACGAGTA 59.834 45.455 0.00 0.00 0.00 2.59
725 2582 3.186909 CATCCATTTCAGCGACGAGTAA 58.813 45.455 0.00 0.00 0.00 2.24
726 2583 3.520290 TCCATTTCAGCGACGAGTAAT 57.480 42.857 0.00 0.00 0.00 1.89
727 2584 3.857052 TCCATTTCAGCGACGAGTAATT 58.143 40.909 0.00 0.00 0.00 1.40
728 2585 4.250464 TCCATTTCAGCGACGAGTAATTT 58.750 39.130 0.00 0.00 0.00 1.82
729 2586 4.092821 TCCATTTCAGCGACGAGTAATTTG 59.907 41.667 0.00 0.00 0.00 2.32
730 2587 4.334443 CATTTCAGCGACGAGTAATTTGG 58.666 43.478 0.00 0.00 0.00 3.28
731 2588 3.306917 TTCAGCGACGAGTAATTTGGA 57.693 42.857 0.00 0.00 0.00 3.53
732 2589 3.306917 TCAGCGACGAGTAATTTGGAA 57.693 42.857 0.00 0.00 0.00 3.53
733 2590 2.991190 TCAGCGACGAGTAATTTGGAAC 59.009 45.455 0.00 0.00 0.00 3.62
734 2591 2.734606 CAGCGACGAGTAATTTGGAACA 59.265 45.455 0.00 0.00 0.00 3.18
735 2592 2.993899 AGCGACGAGTAATTTGGAACAG 59.006 45.455 0.00 0.00 42.39 3.16
736 2593 2.991190 GCGACGAGTAATTTGGAACAGA 59.009 45.455 0.00 0.00 42.39 3.41
737 2594 3.060895 GCGACGAGTAATTTGGAACAGAG 59.939 47.826 0.00 0.00 42.39 3.35
738 2595 3.612860 CGACGAGTAATTTGGAACAGAGG 59.387 47.826 0.00 0.00 42.39 3.69
739 2596 3.933332 GACGAGTAATTTGGAACAGAGGG 59.067 47.826 0.00 0.00 42.39 4.30
740 2597 3.581332 ACGAGTAATTTGGAACAGAGGGA 59.419 43.478 0.00 0.00 42.39 4.20
741 2598 4.184629 CGAGTAATTTGGAACAGAGGGAG 58.815 47.826 0.00 0.00 42.39 4.30
742 2599 4.322801 CGAGTAATTTGGAACAGAGGGAGT 60.323 45.833 0.00 0.00 42.39 3.85
743 2600 5.105473 CGAGTAATTTGGAACAGAGGGAGTA 60.105 44.000 0.00 0.00 42.39 2.59
744 2601 6.407074 CGAGTAATTTGGAACAGAGGGAGTAT 60.407 42.308 0.00 0.00 42.39 2.12
747 2604 6.840780 AATTTGGAACAGAGGGAGTATTTG 57.159 37.500 0.00 0.00 42.39 2.32
751 2608 5.313712 TGGAACAGAGGGAGTATTTGTTTC 58.686 41.667 0.00 0.00 32.58 2.78
778 2806 4.589216 TTTCTGCCTTTCACAAATCAGG 57.411 40.909 0.00 0.00 0.00 3.86
779 2807 3.507162 TCTGCCTTTCACAAATCAGGA 57.493 42.857 0.00 0.00 0.00 3.86
1103 3138 0.960364 GCTTCCTCCAATTCGGTGCA 60.960 55.000 0.00 0.00 35.57 4.57
1112 3147 2.736192 CCAATTCGGTGCAATTTTCCAC 59.264 45.455 0.00 0.00 0.00 4.02
1121 3156 3.868661 GTGCAATTTTCCACGGAAACTTT 59.131 39.130 10.79 5.60 42.88 2.66
1159 3194 0.813184 ATTCGCATTCTTGGTGCTGG 59.187 50.000 0.00 0.00 40.37 4.85
1180 3215 0.960861 GGCAGCTTGTGGGGTAGTTC 60.961 60.000 0.00 0.00 0.00 3.01
1184 3219 0.690762 GCTTGTGGGGTAGTTCCTGA 59.309 55.000 0.00 0.00 36.25 3.86
1297 3332 6.615726 TCATAGCCAAACCCTAGAAATCTAGT 59.384 38.462 14.63 0.00 43.34 2.57
1324 3359 0.375106 CGCCGAATTGAGCTTCTTCC 59.625 55.000 0.00 0.00 0.00 3.46
1342 3377 1.136305 TCCTCTTTCGCGTAGGATTGG 59.864 52.381 5.77 1.08 34.46 3.16
1395 3430 7.138934 AGGATGGATAATTTGGGGTTTACAAT 58.861 34.615 0.00 0.00 0.00 2.71
1403 3438 1.007359 TGGGGTTTACAATTAGGGGCC 59.993 52.381 0.00 0.00 0.00 5.80
1406 3441 1.064537 GGTTTACAATTAGGGGCCGGA 60.065 52.381 5.05 0.00 0.00 5.14
1414 3449 2.231540 TTAGGGGCCGGAATTTGGGG 62.232 60.000 5.05 0.00 0.00 4.96
1490 3525 4.093850 GGTATTTAACCGAATCGCAGTGTT 59.906 41.667 0.00 0.00 38.88 3.32
1513 3548 5.560724 TCACAGGCTAAAATTGCTTCTAGT 58.439 37.500 0.00 0.00 0.00 2.57
1568 3603 1.740025 GATTTCTTCCCAAGTCGCCTG 59.260 52.381 0.00 0.00 0.00 4.85
1586 3621 2.096980 CCTGTCGACGACTATGCTGTTA 59.903 50.000 26.86 4.28 33.15 2.41
1616 3651 0.329261 AGCTCTGCCATGCTTACCAA 59.671 50.000 0.00 0.00 35.86 3.67
1684 3719 1.064611 CCGAGGAGGTGGAGAAGAGTA 60.065 57.143 0.00 0.00 34.51 2.59
1852 3887 5.406780 GTCAATGATAGATGGACATCGGAAC 59.593 44.000 6.65 0.02 42.48 3.62
1873 3908 3.074836 ACGGGAAAAGGATTAGGGTGAAA 59.925 43.478 0.00 0.00 0.00 2.69
1887 3922 4.037222 AGGGTGAAAGATTTTGGTTTGGT 58.963 39.130 0.00 0.00 0.00 3.67
2103 4138 3.785859 TGCAGGGGATGAGGACGC 61.786 66.667 0.00 0.00 0.00 5.19
2308 4343 9.462174 TCTTTGTTATGTTATGCACTTTCTTTG 57.538 29.630 0.00 0.00 0.00 2.77
2411 4449 8.459911 AGCTTGTTTGGTTTACTATACTTTGT 57.540 30.769 0.00 0.00 0.00 2.83
2558 4596 5.624281 GCAATTGACTGCTAATTTAAGGGCA 60.624 40.000 10.34 0.00 39.34 5.36
2562 4600 7.710676 TTGACTGCTAATTTAAGGGCAATAA 57.289 32.000 0.00 0.00 34.21 1.40
2588 4626 8.262933 AGTAGTTTATCCAGGTTTATGTGGTAC 58.737 37.037 0.00 0.00 35.14 3.34
2590 4628 7.110155 AGTTTATCCAGGTTTATGTGGTACTG 58.890 38.462 0.00 0.00 35.14 2.74
2609 4647 3.589988 CTGGTTAGTTACAGCTCCAGTG 58.410 50.000 5.81 0.00 38.01 3.66
2619 4657 2.022195 CAGCTCCAGTGCTTGCAATAT 58.978 47.619 0.00 0.00 41.98 1.28
2624 4662 4.980434 GCTCCAGTGCTTGCAATATATTTG 59.020 41.667 0.00 0.00 0.00 2.32
2626 4664 6.135290 TCCAGTGCTTGCAATATATTTGTC 57.865 37.500 0.00 0.00 0.00 3.18
2628 4666 6.377996 TCCAGTGCTTGCAATATATTTGTCTT 59.622 34.615 0.00 0.00 0.00 3.01
2629 4667 7.555914 TCCAGTGCTTGCAATATATTTGTCTTA 59.444 33.333 0.00 0.00 0.00 2.10
2630 4668 7.645340 CCAGTGCTTGCAATATATTTGTCTTAC 59.355 37.037 0.00 0.00 0.00 2.34
2631 4669 8.400947 CAGTGCTTGCAATATATTTGTCTTACT 58.599 33.333 0.00 0.00 0.00 2.24
2632 4670 8.400947 AGTGCTTGCAATATATTTGTCTTACTG 58.599 33.333 0.00 0.00 0.00 2.74
2634 4672 8.397906 TGCTTGCAATATATTTGTCTTACTGTC 58.602 33.333 0.00 0.00 0.00 3.51
2721 4767 1.425412 CGTGAAGATTTCCGACCGTT 58.575 50.000 0.00 0.00 0.00 4.44
2757 4803 7.856145 TGCACAATATTGAAAGGTTTTTGTT 57.144 28.000 22.16 0.00 0.00 2.83
2817 4863 7.916914 AACTAGGTTTATGTGTTATGTGGAC 57.083 36.000 0.00 0.00 0.00 4.02
2819 4865 7.103641 ACTAGGTTTATGTGTTATGTGGACAG 58.896 38.462 0.00 0.00 0.00 3.51
2906 4957 8.260099 ACTCCTATTACCCTTGGTTATAACTC 57.740 38.462 15.05 6.39 37.09 3.01
2959 5010 0.179034 CCCTCTGGCCTCTATTGTGC 60.179 60.000 3.32 0.00 0.00 4.57
3002 5053 6.373495 CCTGTAATAAGTGGTTTGTTCTACCC 59.627 42.308 0.00 0.00 34.66 3.69
3047 5098 1.691196 TTGTCAGAACTTGGCAAGGG 58.309 50.000 29.26 16.12 45.99 3.95
3206 5257 3.706594 TCAAGATTATCCGAGCTCCAGTT 59.293 43.478 8.47 0.00 0.00 3.16
3271 5322 3.125829 CGTCAACATTGATGAGTTGGAGG 59.874 47.826 7.91 0.00 44.92 4.30
3342 5393 0.684535 TGGTCATGGTGAAAGCGAGA 59.315 50.000 0.00 0.00 36.92 4.04
3384 5435 1.810030 GGACCAGATCGCGTTGGAC 60.810 63.158 25.63 20.68 37.89 4.02
3432 5483 3.190744 ACATGAGAATGTTGCTCAAGCTG 59.809 43.478 0.00 0.00 44.71 4.24
3468 5519 3.196469 AGAAGATCGTGATGCTGAAGGAA 59.804 43.478 0.00 0.00 0.00 3.36
3632 5683 3.760035 GGACTCTGCCCGCTTCGA 61.760 66.667 0.00 0.00 0.00 3.71
3727 5779 3.057386 TGATTTGCGTCGTGTTAGGTCTA 60.057 43.478 0.00 0.00 0.00 2.59
3729 5781 3.581024 TTGCGTCGTGTTAGGTCTAAT 57.419 42.857 0.00 0.00 0.00 1.73
3730 5782 3.581024 TGCGTCGTGTTAGGTCTAATT 57.419 42.857 0.00 0.00 0.00 1.40
3731 5783 3.504863 TGCGTCGTGTTAGGTCTAATTC 58.495 45.455 0.00 0.00 0.00 2.17
3732 5784 3.057386 TGCGTCGTGTTAGGTCTAATTCA 60.057 43.478 0.00 0.00 0.00 2.57
3733 5785 3.302699 GCGTCGTGTTAGGTCTAATTCAC 59.697 47.826 0.00 0.00 0.00 3.18
3734 5786 4.730657 CGTCGTGTTAGGTCTAATTCACT 58.269 43.478 8.71 0.00 0.00 3.41
3735 5787 4.557690 CGTCGTGTTAGGTCTAATTCACTG 59.442 45.833 8.71 4.73 0.00 3.66
3743 5808 2.413837 GTCTAATTCACTGTGCCACGT 58.586 47.619 2.12 0.00 0.00 4.49
3758 5823 2.096174 GCCACGTTGTGAAAGTGTAACA 59.904 45.455 0.00 0.00 38.90 2.41
3762 5827 3.061161 ACGTTGTGAAAGTGTAACACGTC 59.939 43.478 0.00 0.00 41.43 4.34
3793 5858 3.302480 CGCGTGTCCTGCTGTAAATTATC 60.302 47.826 0.00 0.00 0.00 1.75
3833 5900 4.966168 TGGTATATCTAGGTTTGCCTGACA 59.034 41.667 2.52 0.00 46.47 3.58
3847 5914 2.715046 CCTGACAAAGCTCATTGGCTA 58.285 47.619 5.60 0.00 42.24 3.93
3855 5922 4.748277 AAGCTCATTGGCTATTTGCATT 57.252 36.364 0.00 0.00 45.15 3.56
3864 5931 4.861196 TGGCTATTTGCATTTACTGGGTA 58.139 39.130 0.00 0.00 45.15 3.69
3868 5935 4.718940 ATTTGCATTTACTGGGTAGTGC 57.281 40.909 0.00 8.91 37.78 4.40
3873 5940 1.060729 TTTACTGGGTAGTGCCAGCA 58.939 50.000 0.00 0.00 37.78 4.41
3896 5963 4.213482 AGCAGTTCCGTTTGACAATTACTC 59.787 41.667 0.00 0.00 0.00 2.59
3897 5964 4.612939 GCAGTTCCGTTTGACAATTACTCC 60.613 45.833 0.00 0.00 0.00 3.85
3898 5965 4.070009 AGTTCCGTTTGACAATTACTCCC 58.930 43.478 0.00 0.00 0.00 4.30
3899 5966 4.070009 GTTCCGTTTGACAATTACTCCCT 58.930 43.478 0.00 0.00 0.00 4.20
3900 5967 3.934068 TCCGTTTGACAATTACTCCCTC 58.066 45.455 0.00 0.00 0.00 4.30
3901 5968 3.007635 CCGTTTGACAATTACTCCCTCC 58.992 50.000 0.00 0.00 0.00 4.30
3902 5969 2.671396 CGTTTGACAATTACTCCCTCCG 59.329 50.000 0.00 0.00 0.00 4.63
3903 5970 3.671716 GTTTGACAATTACTCCCTCCGT 58.328 45.455 0.00 0.00 0.00 4.69
3904 5971 3.604875 TTGACAATTACTCCCTCCGTC 57.395 47.619 0.00 0.00 0.00 4.79
3905 5972 1.829222 TGACAATTACTCCCTCCGTCC 59.171 52.381 0.00 0.00 0.00 4.79
3906 5973 1.138464 GACAATTACTCCCTCCGTCCC 59.862 57.143 0.00 0.00 0.00 4.46
3907 5974 1.200519 CAATTACTCCCTCCGTCCCA 58.799 55.000 0.00 0.00 0.00 4.37
3908 5975 1.768870 CAATTACTCCCTCCGTCCCAT 59.231 52.381 0.00 0.00 0.00 4.00
3909 5976 2.969950 CAATTACTCCCTCCGTCCCATA 59.030 50.000 0.00 0.00 0.00 2.74
3910 5977 2.852714 TTACTCCCTCCGTCCCATAA 57.147 50.000 0.00 0.00 0.00 1.90
3911 5978 2.376695 TACTCCCTCCGTCCCATAAG 57.623 55.000 0.00 0.00 0.00 1.73
3912 5979 0.635009 ACTCCCTCCGTCCCATAAGA 59.365 55.000 0.00 0.00 0.00 2.10
3913 5980 1.041437 CTCCCTCCGTCCCATAAGAC 58.959 60.000 0.00 0.00 0.00 3.01
3922 5989 3.907894 GTCCCATAAGACGTTTTTGCA 57.092 42.857 0.00 0.00 0.00 4.08
3923 5990 4.231718 GTCCCATAAGACGTTTTTGCAA 57.768 40.909 0.00 0.00 0.00 4.08
3924 5991 4.226761 GTCCCATAAGACGTTTTTGCAAG 58.773 43.478 0.00 0.00 0.00 4.01
3925 5992 2.986479 CCCATAAGACGTTTTTGCAAGC 59.014 45.455 0.00 0.00 0.00 4.01
3926 5993 3.305335 CCCATAAGACGTTTTTGCAAGCT 60.305 43.478 0.00 0.00 0.00 3.74
3927 5994 4.083003 CCCATAAGACGTTTTTGCAAGCTA 60.083 41.667 0.00 0.00 0.00 3.32
3928 5995 5.393027 CCCATAAGACGTTTTTGCAAGCTAT 60.393 40.000 0.00 0.00 0.00 2.97
3929 5996 5.512788 CCATAAGACGTTTTTGCAAGCTATG 59.487 40.000 0.00 0.00 0.00 2.23
3930 5997 4.568152 AAGACGTTTTTGCAAGCTATGT 57.432 36.364 0.00 0.68 0.00 2.29
3931 5998 4.568152 AGACGTTTTTGCAAGCTATGTT 57.432 36.364 0.00 0.00 0.00 2.71
3932 5999 4.932146 AGACGTTTTTGCAAGCTATGTTT 58.068 34.783 0.00 0.00 0.00 2.83
3933 6000 6.067263 AGACGTTTTTGCAAGCTATGTTTA 57.933 33.333 0.00 0.00 0.00 2.01
3934 6001 6.142817 AGACGTTTTTGCAAGCTATGTTTAG 58.857 36.000 0.00 0.00 0.00 1.85
3935 6002 6.017440 AGACGTTTTTGCAAGCTATGTTTAGA 60.017 34.615 0.00 0.00 0.00 2.10
3936 6003 6.500041 ACGTTTTTGCAAGCTATGTTTAGAA 58.500 32.000 0.00 0.00 0.00 2.10
3937 6004 6.975772 ACGTTTTTGCAAGCTATGTTTAGAAA 59.024 30.769 0.00 0.00 0.00 2.52
3938 6005 7.489757 ACGTTTTTGCAAGCTATGTTTAGAAAA 59.510 29.630 0.00 0.00 0.00 2.29
3939 6006 7.787480 CGTTTTTGCAAGCTATGTTTAGAAAAC 59.213 33.333 0.00 2.08 32.76 2.43
3940 6007 6.984740 TTTGCAAGCTATGTTTAGAAAACG 57.015 33.333 0.00 0.00 0.00 3.60
3941 6008 5.682943 TGCAAGCTATGTTTAGAAAACGT 57.317 34.783 0.00 3.06 0.00 3.99
3942 6009 5.685841 TGCAAGCTATGTTTAGAAAACGTC 58.314 37.500 0.73 0.00 0.00 4.34
3943 6010 5.468746 TGCAAGCTATGTTTAGAAAACGTCT 59.531 36.000 0.73 0.00 40.71 4.18
3944 6011 6.017440 TGCAAGCTATGTTTAGAAAACGTCTT 60.017 34.615 0.73 0.00 37.84 3.01
3945 6012 7.171848 TGCAAGCTATGTTTAGAAAACGTCTTA 59.828 33.333 0.73 0.00 37.84 2.10
3946 6013 8.175716 GCAAGCTATGTTTAGAAAACGTCTTAT 58.824 33.333 0.73 0.00 37.84 1.73
3954 6021 8.723311 TGTTTAGAAAACGTCTTATATTGTGGG 58.277 33.333 0.00 0.00 37.84 4.61
3955 6022 8.938906 GTTTAGAAAACGTCTTATATTGTGGGA 58.061 33.333 0.00 0.00 37.84 4.37
3956 6023 6.980051 AGAAAACGTCTTATATTGTGGGAC 57.020 37.500 0.00 0.00 29.66 4.46
3959 6026 2.750948 CGTCTTATATTGTGGGACGGG 58.249 52.381 0.00 0.00 43.69 5.28
3960 6027 2.547218 CGTCTTATATTGTGGGACGGGG 60.547 54.545 0.00 0.00 43.69 5.73
3961 6028 2.701951 GTCTTATATTGTGGGACGGGGA 59.298 50.000 0.00 0.00 0.00 4.81
3962 6029 2.701951 TCTTATATTGTGGGACGGGGAC 59.298 50.000 0.00 0.00 0.00 4.46
3984 6051 4.184629 CGGAGGAAGTAGTTTCATTCTGG 58.815 47.826 0.00 0.00 37.54 3.86
3986 6053 5.105473 CGGAGGAAGTAGTTTCATTCTGGTA 60.105 44.000 0.00 0.00 37.54 3.25
3993 6060 6.708285 AGTAGTTTCATTCTGGTATCCGTTT 58.292 36.000 0.00 0.00 0.00 3.60
3994 6061 5.880054 AGTTTCATTCTGGTATCCGTTTG 57.120 39.130 0.00 0.00 0.00 2.93
3997 6064 5.621197 TTCATTCTGGTATCCGTTTGTTG 57.379 39.130 0.00 0.00 0.00 3.33
4019 6269 0.109342 CAGGTCCAGGTTTGACTGCT 59.891 55.000 0.00 0.00 37.16 4.24
4051 6409 6.330278 CCAGTCTTCAATGTAGTCATTACGA 58.670 40.000 0.00 0.00 41.66 3.43
4052 6410 6.473778 CCAGTCTTCAATGTAGTCATTACGAG 59.526 42.308 0.00 0.00 41.66 4.18
4059 6417 3.920446 TGTAGTCATTACGAGCAAGCAA 58.080 40.909 0.00 0.00 34.87 3.91
4060 6418 3.926527 TGTAGTCATTACGAGCAAGCAAG 59.073 43.478 0.00 0.00 34.87 4.01
4061 6419 1.734465 AGTCATTACGAGCAAGCAAGC 59.266 47.619 0.00 0.00 0.00 4.01
4062 6420 1.464608 GTCATTACGAGCAAGCAAGCA 59.535 47.619 3.19 0.00 36.85 3.91
4070 6428 2.912967 CGAGCAAGCAAGCAAGTAATTG 59.087 45.455 0.00 0.00 36.85 2.32
4117 6475 3.766591 TCAGAACTGAACTCTGGATCTCC 59.233 47.826 1.79 0.00 40.65 3.71
4131 6489 0.324460 ATCTCCGGTCTTCTCCCGTT 60.324 55.000 0.00 0.00 43.98 4.44
4208 6849 0.462759 CGTTTCCTGCTCCCATCCTC 60.463 60.000 0.00 0.00 0.00 3.71
4224 6865 0.389166 CCTCTCTCGCTGCTTCGTTT 60.389 55.000 0.00 0.00 0.00 3.60
4225 6866 1.423395 CTCTCTCGCTGCTTCGTTTT 58.577 50.000 0.00 0.00 0.00 2.43
4245 6886 6.471198 CGTTTTAAGGACCAAGACAAAGAAAC 59.529 38.462 0.00 0.00 0.00 2.78
4297 6940 4.118410 CAGTAGCATGTTCCTTAGCTGAG 58.882 47.826 0.00 0.00 37.94 3.35
4326 6969 5.959583 AGGAGTACCAAATAAGCTAAGCT 57.040 39.130 0.00 0.00 38.64 3.74
4391 7043 3.620061 TGCTTCACCTTCTGCAGAG 57.380 52.632 17.43 9.03 0.00 3.35
4393 7045 1.270518 TGCTTCACCTTCTGCAGAGAC 60.271 52.381 17.43 0.86 0.00 3.36
4394 7046 1.943507 GCTTCACCTTCTGCAGAGACC 60.944 57.143 17.43 1.21 0.00 3.85
4395 7047 1.345741 CTTCACCTTCTGCAGAGACCA 59.654 52.381 17.43 0.48 0.00 4.02
4396 7048 1.649321 TCACCTTCTGCAGAGACCAT 58.351 50.000 17.43 0.00 0.00 3.55
4399 7051 0.534412 CCTTCTGCAGAGACCATCGT 59.466 55.000 17.43 0.00 0.00 3.73
4400 7052 1.066573 CCTTCTGCAGAGACCATCGTT 60.067 52.381 17.43 0.00 0.00 3.85
4404 7056 0.904649 TGCAGAGACCATCGTTCCAT 59.095 50.000 0.00 0.00 0.00 3.41
4405 7057 1.278985 TGCAGAGACCATCGTTCCATT 59.721 47.619 0.00 0.00 0.00 3.16
4406 7058 2.290260 TGCAGAGACCATCGTTCCATTT 60.290 45.455 0.00 0.00 0.00 2.32
4408 7060 2.679837 CAGAGACCATCGTTCCATTTGG 59.320 50.000 0.00 0.00 35.31 3.28
4411 7063 2.167662 GACCATCGTTCCATTTGGGTT 58.832 47.619 0.00 0.00 38.11 4.11
4412 7064 3.009695 AGACCATCGTTCCATTTGGGTTA 59.990 43.478 0.00 0.00 38.11 2.85
4413 7065 3.086282 ACCATCGTTCCATTTGGGTTAC 58.914 45.455 0.00 0.00 38.11 2.50
4416 7068 4.159506 CCATCGTTCCATTTGGGTTACAAT 59.840 41.667 0.00 0.00 39.21 2.71
4418 7070 6.459573 CCATCGTTCCATTTGGGTTACAATAG 60.460 42.308 0.00 0.00 39.21 1.73
4419 7071 5.562635 TCGTTCCATTTGGGTTACAATAGT 58.437 37.500 0.00 0.00 39.21 2.12
4421 7073 7.340256 TCGTTCCATTTGGGTTACAATAGTAT 58.660 34.615 0.00 0.00 39.21 2.12
4422 7074 7.830201 TCGTTCCATTTGGGTTACAATAGTATT 59.170 33.333 0.00 0.00 39.21 1.89
4423 7075 8.463607 CGTTCCATTTGGGTTACAATAGTATTT 58.536 33.333 0.00 0.00 39.21 1.40
4424 7076 9.797556 GTTCCATTTGGGTTACAATAGTATTTC 57.202 33.333 0.00 0.00 39.21 2.17
4426 7078 8.962679 TCCATTTGGGTTACAATAGTATTTCAC 58.037 33.333 0.00 0.00 39.21 3.18
4427 7079 8.966868 CCATTTGGGTTACAATAGTATTTCACT 58.033 33.333 0.00 0.00 39.21 3.41
4430 7082 9.575868 TTTGGGTTACAATAGTATTTCACTTGA 57.424 29.630 0.00 0.00 39.21 3.02
4431 7083 8.786826 TGGGTTACAATAGTATTTCACTTGAG 57.213 34.615 0.00 0.00 38.80 3.02
4433 7085 8.044908 GGGTTACAATAGTATTTCACTTGAGGA 58.955 37.037 0.00 0.00 38.80 3.71
4434 7086 9.444600 GGTTACAATAGTATTTCACTTGAGGAA 57.555 33.333 0.00 0.00 38.80 3.36
4438 7090 9.520515 ACAATAGTATTTCACTTGAGGAAACAT 57.479 29.630 0.00 0.00 38.80 2.71
4443 7095 9.220767 AGTATTTCACTTGAGGAAACATTACTC 57.779 33.333 0.00 0.00 37.10 2.59
4444 7096 6.539649 TTTCACTTGAGGAAACATTACTCG 57.460 37.500 0.00 0.00 34.03 4.18
4445 7097 5.209818 TCACTTGAGGAAACATTACTCGT 57.790 39.130 0.00 0.00 34.03 4.18
4446 7098 4.988540 TCACTTGAGGAAACATTACTCGTG 59.011 41.667 4.79 4.79 34.03 4.35
4450 7102 4.503910 TGAGGAAACATTACTCGTGGATG 58.496 43.478 0.00 2.75 34.03 3.51
4455 7107 6.659242 AGGAAACATTACTCGTGGATGAAAAT 59.341 34.615 9.22 0.00 0.00 1.82
4456 7108 7.827236 AGGAAACATTACTCGTGGATGAAAATA 59.173 33.333 9.22 0.00 0.00 1.40
4457 7109 7.908601 GGAAACATTACTCGTGGATGAAAATAC 59.091 37.037 9.22 0.00 0.00 1.89
4458 7110 6.920569 ACATTACTCGTGGATGAAAATACC 57.079 37.500 9.22 0.00 0.00 2.73
4459 7111 5.820947 ACATTACTCGTGGATGAAAATACCC 59.179 40.000 9.22 0.00 0.00 3.69
4461 7113 4.569719 ACTCGTGGATGAAAATACCCTT 57.430 40.909 0.00 0.00 0.00 3.95
4462 7114 4.918588 ACTCGTGGATGAAAATACCCTTT 58.081 39.130 0.00 0.00 0.00 3.11
4463 7115 5.321927 ACTCGTGGATGAAAATACCCTTTT 58.678 37.500 0.00 0.00 0.00 2.27
4465 7117 6.072119 ACTCGTGGATGAAAATACCCTTTTTC 60.072 38.462 3.36 3.36 43.01 2.29
4466 7118 5.092781 CGTGGATGAAAATACCCTTTTTCG 58.907 41.667 5.49 0.00 44.74 3.46
4467 7119 5.106475 CGTGGATGAAAATACCCTTTTTCGA 60.106 40.000 5.49 0.00 44.74 3.71
4468 7120 6.568844 CGTGGATGAAAATACCCTTTTTCGAA 60.569 38.462 0.00 0.00 44.74 3.71
4469 7121 7.320399 GTGGATGAAAATACCCTTTTTCGAAT 58.680 34.615 0.00 0.00 44.74 3.34
4470 7122 8.463607 GTGGATGAAAATACCCTTTTTCGAATA 58.536 33.333 0.00 0.00 44.74 1.75
4471 7123 9.196139 TGGATGAAAATACCCTTTTTCGAATAT 57.804 29.630 0.00 0.00 44.74 1.28
4505 7157 5.982465 TTTTTGCTGGAAGTAATTTGTGC 57.018 34.783 0.00 0.00 38.67 4.57
4506 7158 4.935352 TTTGCTGGAAGTAATTTGTGCT 57.065 36.364 0.00 0.00 38.67 4.40
4507 7159 4.503741 TTGCTGGAAGTAATTTGTGCTC 57.496 40.909 0.00 0.00 32.09 4.26
4508 7160 2.819608 TGCTGGAAGTAATTTGTGCTCC 59.180 45.455 0.00 0.00 35.30 4.70
4509 7161 2.164422 GCTGGAAGTAATTTGTGCTCCC 59.836 50.000 0.00 0.00 35.30 4.30
4510 7162 3.690460 CTGGAAGTAATTTGTGCTCCCT 58.310 45.455 0.00 0.00 0.00 4.20
4512 7164 3.017442 GGAAGTAATTTGTGCTCCCTCC 58.983 50.000 0.00 0.00 0.00 4.30
4513 7165 2.403252 AGTAATTTGTGCTCCCTCCG 57.597 50.000 0.00 0.00 0.00 4.63
4515 7167 2.007608 GTAATTTGTGCTCCCTCCGTC 58.992 52.381 0.00 0.00 0.00 4.79
4516 7168 0.693049 AATTTGTGCTCCCTCCGTCT 59.307 50.000 0.00 0.00 0.00 4.18
4517 7169 1.568504 ATTTGTGCTCCCTCCGTCTA 58.431 50.000 0.00 0.00 0.00 2.59
4519 7171 0.541063 TTGTGCTCCCTCCGTCTACA 60.541 55.000 0.00 0.00 0.00 2.74
4521 7173 0.173708 GTGCTCCCTCCGTCTACAAG 59.826 60.000 0.00 0.00 0.00 3.16
4522 7174 0.970937 TGCTCCCTCCGTCTACAAGG 60.971 60.000 0.00 0.00 0.00 3.61
4523 7175 0.971447 GCTCCCTCCGTCTACAAGGT 60.971 60.000 0.00 0.00 0.00 3.50
4526 7178 2.688958 CTCCCTCCGTCTACAAGGTTAG 59.311 54.545 0.00 0.00 0.00 2.34
4527 7179 2.042162 TCCCTCCGTCTACAAGGTTAGT 59.958 50.000 0.00 0.00 0.00 2.24
4529 7181 3.379688 CCCTCCGTCTACAAGGTTAGTAC 59.620 52.174 0.00 0.00 0.00 2.73
4531 7183 4.460382 CCTCCGTCTACAAGGTTAGTACAA 59.540 45.833 0.00 0.00 0.00 2.41
4532 7184 5.392811 CCTCCGTCTACAAGGTTAGTACAAG 60.393 48.000 0.00 0.00 0.00 3.16
4533 7185 4.460382 TCCGTCTACAAGGTTAGTACAAGG 59.540 45.833 0.00 0.00 0.00 3.61
4534 7186 4.219288 CCGTCTACAAGGTTAGTACAAGGT 59.781 45.833 0.00 0.00 0.00 3.50
4535 7187 5.279156 CCGTCTACAAGGTTAGTACAAGGTT 60.279 44.000 0.00 0.00 0.00 3.50
4537 7189 6.519382 GTCTACAAGGTTAGTACAAGGTTGT 58.481 40.000 0.24 0.24 44.86 3.32
4538 7190 7.522073 CGTCTACAAGGTTAGTACAAGGTTGTA 60.522 40.741 0.00 0.00 42.35 2.41
4554 7206 9.832445 ACAAGGTTGTACTAAATCATCGATATT 57.168 29.630 0.00 0.00 40.16 1.28
4570 7222 9.481340 TCATCGATATTAATTTTGAGACTGAGG 57.519 33.333 0.00 0.00 0.00 3.86
4571 7223 9.265901 CATCGATATTAATTTTGAGACTGAGGT 57.734 33.333 0.00 0.00 0.00 3.85
4573 7225 9.967346 TCGATATTAATTTTGAGACTGAGGTAG 57.033 33.333 0.00 0.00 0.00 3.18
4574 7226 9.751542 CGATATTAATTTTGAGACTGAGGTAGT 57.248 33.333 0.00 0.00 44.02 2.73
4587 7514 9.393512 GAGACTGAGGTAGTAGTATTACTCAAA 57.606 37.037 0.51 0.00 40.53 2.69
4588 7515 9.176460 AGACTGAGGTAGTAGTATTACTCAAAC 57.824 37.037 0.51 0.00 40.53 2.93
4589 7516 9.176460 GACTGAGGTAGTAGTATTACTCAAACT 57.824 37.037 0.51 1.60 40.53 2.66
4607 7534 9.209175 ACTCAAACTATTAGTCTTTGTGATGTC 57.791 33.333 13.37 0.00 0.00 3.06
4608 7535 9.208022 CTCAAACTATTAGTCTTTGTGATGTCA 57.792 33.333 0.00 0.00 0.00 3.58
4609 7536 9.725019 TCAAACTATTAGTCTTTGTGATGTCAT 57.275 29.630 0.00 0.00 0.00 3.06
4666 7593 5.076873 ACTAAGGCCACTGCTTTTCAAATA 58.923 37.500 5.01 0.00 37.94 1.40
4679 7606 5.122239 GCTTTTCAAATATTTCCAAGTGGGC 59.878 40.000 0.00 0.00 36.21 5.36
4696 7623 1.209998 GGCGTATCGAAGAAAGCCTC 58.790 55.000 13.04 0.00 45.85 4.70
4697 7624 0.847035 GCGTATCGAAGAAAGCCTCG 59.153 55.000 0.00 0.00 43.58 4.63
4713 7641 1.272781 CTCGCTTAGCAAGAGGTTCG 58.727 55.000 4.70 0.00 0.00 3.95
4720 7648 4.393371 GCTTAGCAAGAGGTTCGAGAAAAT 59.607 41.667 0.00 0.00 0.00 1.82
4721 7649 5.446607 GCTTAGCAAGAGGTTCGAGAAAATC 60.447 44.000 0.00 0.00 0.00 2.17
4722 7650 4.008074 AGCAAGAGGTTCGAGAAAATCA 57.992 40.909 0.00 0.00 0.00 2.57
4725 7653 4.319177 CAAGAGGTTCGAGAAAATCAGGT 58.681 43.478 0.00 0.00 0.00 4.00
4731 7659 6.531021 AGGTTCGAGAAAATCAGGTAGAAAA 58.469 36.000 0.00 0.00 0.00 2.29
4736 7664 6.070194 TCGAGAAAATCAGGTAGAAAAGGGAT 60.070 38.462 0.00 0.00 0.00 3.85
4737 7665 7.125204 TCGAGAAAATCAGGTAGAAAAGGGATA 59.875 37.037 0.00 0.00 0.00 2.59
4738 7666 7.934120 CGAGAAAATCAGGTAGAAAAGGGATAT 59.066 37.037 0.00 0.00 0.00 1.63
4741 7669 9.847224 GAAAATCAGGTAGAAAAGGGATATACA 57.153 33.333 0.00 0.00 0.00 2.29
4745 7673 9.799106 ATCAGGTAGAAAAGGGATATACAAATG 57.201 33.333 0.00 0.00 0.00 2.32
4746 7674 8.778059 TCAGGTAGAAAAGGGATATACAAATGT 58.222 33.333 0.00 0.00 0.00 2.71
4758 7686 9.408069 GGGATATACAAATGTAGAAACTAGACG 57.592 37.037 0.00 0.00 33.52 4.18
4759 7687 9.408069 GGATATACAAATGTAGAAACTAGACGG 57.592 37.037 0.00 0.00 33.52 4.79
4760 7688 9.962783 GATATACAAATGTAGAAACTAGACGGT 57.037 33.333 0.00 0.00 33.52 4.83
4763 7691 9.962783 ATACAAATGTAGAAACTAGACGGTATC 57.037 33.333 0.00 0.00 33.52 2.24
4764 7692 7.833786 ACAAATGTAGAAACTAGACGGTATCA 58.166 34.615 0.00 0.00 0.00 2.15
4765 7693 7.758528 ACAAATGTAGAAACTAGACGGTATCAC 59.241 37.037 0.00 0.00 0.00 3.06
4766 7694 7.642082 AATGTAGAAACTAGACGGTATCACT 57.358 36.000 0.00 0.00 0.00 3.41
4767 7695 6.432607 TGTAGAAACTAGACGGTATCACTG 57.567 41.667 0.00 0.00 0.00 3.66
4768 7696 4.985538 AGAAACTAGACGGTATCACTGG 57.014 45.455 0.00 0.00 0.00 4.00
4769 7697 4.342359 AGAAACTAGACGGTATCACTGGT 58.658 43.478 0.00 0.00 0.00 4.00
4770 7698 4.771054 AGAAACTAGACGGTATCACTGGTT 59.229 41.667 0.00 0.00 37.04 3.67
4771 7699 4.715527 AACTAGACGGTATCACTGGTTC 57.284 45.455 0.00 0.00 31.69 3.62
4772 7700 3.965694 ACTAGACGGTATCACTGGTTCT 58.034 45.455 0.00 0.00 0.00 3.01
4773 7701 3.695060 ACTAGACGGTATCACTGGTTCTG 59.305 47.826 0.00 0.00 0.00 3.02
4774 7702 1.825474 AGACGGTATCACTGGTTCTGG 59.175 52.381 0.00 0.00 0.00 3.86
4775 7703 0.249398 ACGGTATCACTGGTTCTGGC 59.751 55.000 0.00 0.00 0.00 4.85
4776 7704 0.249120 CGGTATCACTGGTTCTGGCA 59.751 55.000 0.00 0.00 0.00 4.92
4777 7705 1.338674 CGGTATCACTGGTTCTGGCAA 60.339 52.381 0.00 0.00 0.00 4.52
4778 7706 2.359900 GGTATCACTGGTTCTGGCAAG 58.640 52.381 0.00 0.00 0.00 4.01
4779 7707 2.359900 GTATCACTGGTTCTGGCAAGG 58.640 52.381 0.00 0.00 0.00 3.61
4780 7708 0.773644 ATCACTGGTTCTGGCAAGGT 59.226 50.000 0.00 0.00 0.00 3.50
4781 7709 1.429930 TCACTGGTTCTGGCAAGGTA 58.570 50.000 0.00 0.00 0.00 3.08
4782 7710 1.771854 TCACTGGTTCTGGCAAGGTAA 59.228 47.619 0.00 0.00 0.00 2.85
4783 7711 2.375174 TCACTGGTTCTGGCAAGGTAAT 59.625 45.455 0.00 0.00 0.00 1.89
4784 7712 3.585289 TCACTGGTTCTGGCAAGGTAATA 59.415 43.478 0.00 0.00 0.00 0.98
4785 7713 3.941483 CACTGGTTCTGGCAAGGTAATAG 59.059 47.826 0.00 0.00 0.00 1.73
4786 7714 3.587506 ACTGGTTCTGGCAAGGTAATAGT 59.412 43.478 0.00 0.00 0.00 2.12
4787 7715 4.192317 CTGGTTCTGGCAAGGTAATAGTC 58.808 47.826 0.00 0.00 0.00 2.59
4788 7716 3.054655 TGGTTCTGGCAAGGTAATAGTCC 60.055 47.826 0.00 0.00 0.00 3.85
4789 7717 3.200165 GGTTCTGGCAAGGTAATAGTCCT 59.800 47.826 0.00 0.00 36.81 3.85
4790 7718 4.192317 GTTCTGGCAAGGTAATAGTCCTG 58.808 47.826 0.00 0.00 35.27 3.86
4791 7719 3.719871 TCTGGCAAGGTAATAGTCCTGA 58.280 45.455 0.00 0.00 35.27 3.86
4792 7720 4.101114 TCTGGCAAGGTAATAGTCCTGAA 58.899 43.478 0.00 0.00 35.27 3.02
4793 7721 4.081087 TCTGGCAAGGTAATAGTCCTGAAC 60.081 45.833 0.00 0.00 35.27 3.18
4794 7722 3.585289 TGGCAAGGTAATAGTCCTGAACA 59.415 43.478 0.00 0.00 35.27 3.18
4795 7723 4.227300 TGGCAAGGTAATAGTCCTGAACAT 59.773 41.667 0.00 0.00 35.27 2.71
4796 7724 5.427157 TGGCAAGGTAATAGTCCTGAACATA 59.573 40.000 0.00 0.00 35.27 2.29
4797 7725 6.069905 TGGCAAGGTAATAGTCCTGAACATAA 60.070 38.462 0.00 0.00 35.27 1.90
4798 7726 6.826741 GGCAAGGTAATAGTCCTGAACATAAA 59.173 38.462 0.00 0.00 35.27 1.40
4799 7727 7.502561 GGCAAGGTAATAGTCCTGAACATAAAT 59.497 37.037 0.00 0.00 35.27 1.40
4800 7728 9.555727 GCAAGGTAATAGTCCTGAACATAAATA 57.444 33.333 0.00 0.00 35.27 1.40
4828 7756 7.907841 ACTTAGTAAATGGGGTGTTTTTCTT 57.092 32.000 0.00 0.00 0.00 2.52
4829 7757 8.313944 ACTTAGTAAATGGGGTGTTTTTCTTT 57.686 30.769 0.00 0.00 0.00 2.52
4830 7758 9.423964 ACTTAGTAAATGGGGTGTTTTTCTTTA 57.576 29.630 0.00 0.00 0.00 1.85
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
77 78 7.935755 ACATGATCTGACCCATTTCTAATACAG 59.064 37.037 0.00 0.00 0.00 2.74
85 1887 5.757850 GGTAACATGATCTGACCCATTTC 57.242 43.478 0.00 0.00 0.00 2.17
121 1923 3.558931 ATGGTCGAGTAATGATTGGCA 57.441 42.857 0.00 0.00 0.00 4.92
130 1932 0.174845 CCGGCTCAATGGTCGAGTAA 59.825 55.000 0.00 0.00 32.83 2.24
135 1937 2.892425 GAGCCGGCTCAATGGTCG 60.892 66.667 44.10 0.00 42.31 4.79
232 2037 8.970859 AGAAAAGATTGTCCACCTGAATATAG 57.029 34.615 0.00 0.00 0.00 1.31
255 2060 4.787551 TCTCTTTTAAACAGCCACCAAGA 58.212 39.130 0.00 0.00 0.00 3.02
263 2068 6.310224 TGCAACTTGTTTCTCTTTTAAACAGC 59.690 34.615 0.00 0.00 44.94 4.40
369 2175 9.893305 AATCTTTTATTTCAAAAGTGAGTACGG 57.107 29.630 8.79 0.00 38.17 4.02
542 2399 7.454380 TGAGGTTGGAGTGGATGAAAATATTTT 59.546 33.333 13.24 13.24 0.00 1.82
586 2443 6.819284 TGAAAGTTTGATTGAGCAAAGGAAT 58.181 32.000 0.00 0.00 38.33 3.01
592 2449 4.746115 GTGCATGAAAGTTTGATTGAGCAA 59.254 37.500 0.00 0.00 0.00 3.91
594 2451 4.300803 TGTGCATGAAAGTTTGATTGAGC 58.699 39.130 0.00 0.00 0.00 4.26
626 2483 2.834549 CGGAGGGAGTATATGCAGGAAT 59.165 50.000 0.00 0.00 0.00 3.01
636 2493 4.648307 AGTAATTCGAAACGGAGGGAGTAT 59.352 41.667 0.00 0.00 0.00 2.12
637 2494 4.019174 AGTAATTCGAAACGGAGGGAGTA 58.981 43.478 0.00 0.00 0.00 2.59
638 2495 2.830321 AGTAATTCGAAACGGAGGGAGT 59.170 45.455 0.00 0.00 0.00 3.85
639 2496 3.521947 AGTAATTCGAAACGGAGGGAG 57.478 47.619 0.00 0.00 0.00 4.30
640 2497 3.007182 ACAAGTAATTCGAAACGGAGGGA 59.993 43.478 0.00 0.00 0.00 4.20
641 2498 3.332034 ACAAGTAATTCGAAACGGAGGG 58.668 45.455 0.00 0.00 0.00 4.30
642 2499 3.060363 CGACAAGTAATTCGAAACGGAGG 59.940 47.826 0.00 0.00 37.43 4.30
643 2500 3.481467 GCGACAAGTAATTCGAAACGGAG 60.481 47.826 0.00 0.00 37.43 4.63
644 2501 2.409378 GCGACAAGTAATTCGAAACGGA 59.591 45.455 0.00 0.00 37.43 4.69
645 2502 2.156117 TGCGACAAGTAATTCGAAACGG 59.844 45.455 0.00 0.00 37.43 4.44
646 2503 3.427516 TGCGACAAGTAATTCGAAACG 57.572 42.857 0.00 0.09 37.43 3.60
647 2504 4.708601 ACATGCGACAAGTAATTCGAAAC 58.291 39.130 0.00 0.00 37.43 2.78
648 2505 6.456315 CCATACATGCGACAAGTAATTCGAAA 60.456 38.462 0.00 0.00 37.43 3.46
649 2506 5.006261 CCATACATGCGACAAGTAATTCGAA 59.994 40.000 0.00 0.00 37.43 3.71
650 2507 4.506288 CCATACATGCGACAAGTAATTCGA 59.494 41.667 0.00 0.00 37.43 3.71
651 2508 4.506288 TCCATACATGCGACAAGTAATTCG 59.494 41.667 0.00 0.00 38.31 3.34
652 2509 5.984233 TCCATACATGCGACAAGTAATTC 57.016 39.130 0.00 0.00 0.00 2.17
653 2510 5.822519 ACATCCATACATGCGACAAGTAATT 59.177 36.000 0.00 0.00 0.00 1.40
654 2511 5.368145 ACATCCATACATGCGACAAGTAAT 58.632 37.500 0.00 0.00 0.00 1.89
655 2512 4.765273 ACATCCATACATGCGACAAGTAA 58.235 39.130 0.00 0.00 0.00 2.24
656 2513 4.400529 ACATCCATACATGCGACAAGTA 57.599 40.909 0.00 0.00 0.00 2.24
657 2514 3.266510 ACATCCATACATGCGACAAGT 57.733 42.857 0.00 0.00 0.00 3.16
658 2515 5.233225 AGATACATCCATACATGCGACAAG 58.767 41.667 0.00 0.00 0.00 3.16
659 2516 5.213891 AGATACATCCATACATGCGACAA 57.786 39.130 0.00 0.00 0.00 3.18
660 2517 4.871933 AGATACATCCATACATGCGACA 57.128 40.909 0.00 0.00 0.00 4.35
661 2518 6.196079 TCTAGATACATCCATACATGCGAC 57.804 41.667 0.00 0.00 0.00 5.19
662 2519 6.378280 ACATCTAGATACATCCATACATGCGA 59.622 38.462 4.54 0.00 0.00 5.10
663 2520 6.567959 ACATCTAGATACATCCATACATGCG 58.432 40.000 4.54 0.00 0.00 4.73
691 2548 8.826710 CGCTGAAATGGATGTATCTAAAACTAA 58.173 33.333 0.00 0.00 0.00 2.24
692 2549 8.201464 TCGCTGAAATGGATGTATCTAAAACTA 58.799 33.333 0.00 0.00 0.00 2.24
693 2550 7.011482 GTCGCTGAAATGGATGTATCTAAAACT 59.989 37.037 0.00 0.00 0.00 2.66
694 2551 7.126398 GTCGCTGAAATGGATGTATCTAAAAC 58.874 38.462 0.00 0.00 0.00 2.43
695 2552 6.019075 CGTCGCTGAAATGGATGTATCTAAAA 60.019 38.462 0.00 0.00 0.00 1.52
696 2553 5.462068 CGTCGCTGAAATGGATGTATCTAAA 59.538 40.000 0.00 0.00 0.00 1.85
697 2554 4.982295 CGTCGCTGAAATGGATGTATCTAA 59.018 41.667 0.00 0.00 0.00 2.10
698 2555 4.277423 TCGTCGCTGAAATGGATGTATCTA 59.723 41.667 0.00 0.00 0.00 1.98
699 2556 3.068165 TCGTCGCTGAAATGGATGTATCT 59.932 43.478 0.00 0.00 0.00 1.98
700 2557 3.381045 TCGTCGCTGAAATGGATGTATC 58.619 45.455 0.00 0.00 0.00 2.24
701 2558 3.181475 ACTCGTCGCTGAAATGGATGTAT 60.181 43.478 0.00 0.00 0.00 2.29
702 2559 2.165641 ACTCGTCGCTGAAATGGATGTA 59.834 45.455 0.00 0.00 0.00 2.29
703 2560 1.066858 ACTCGTCGCTGAAATGGATGT 60.067 47.619 0.00 0.00 0.00 3.06
704 2561 1.645034 ACTCGTCGCTGAAATGGATG 58.355 50.000 0.00 0.00 0.00 3.51
705 2562 3.520290 TTACTCGTCGCTGAAATGGAT 57.480 42.857 0.00 0.00 0.00 3.41
706 2563 3.520290 ATTACTCGTCGCTGAAATGGA 57.480 42.857 0.00 0.00 0.00 3.41
707 2564 4.334443 CAAATTACTCGTCGCTGAAATGG 58.666 43.478 0.00 0.00 0.00 3.16
708 2565 4.092821 TCCAAATTACTCGTCGCTGAAATG 59.907 41.667 0.00 0.00 0.00 2.32
709 2566 4.250464 TCCAAATTACTCGTCGCTGAAAT 58.750 39.130 0.00 0.00 0.00 2.17
710 2567 3.655486 TCCAAATTACTCGTCGCTGAAA 58.345 40.909 0.00 0.00 0.00 2.69
711 2568 3.306917 TCCAAATTACTCGTCGCTGAA 57.693 42.857 0.00 0.00 0.00 3.02
712 2569 2.991190 GTTCCAAATTACTCGTCGCTGA 59.009 45.455 0.00 0.00 0.00 4.26
713 2570 2.734606 TGTTCCAAATTACTCGTCGCTG 59.265 45.455 0.00 0.00 0.00 5.18
714 2571 2.993899 CTGTTCCAAATTACTCGTCGCT 59.006 45.455 0.00 0.00 0.00 4.93
715 2572 2.991190 TCTGTTCCAAATTACTCGTCGC 59.009 45.455 0.00 0.00 0.00 5.19
716 2573 3.612860 CCTCTGTTCCAAATTACTCGTCG 59.387 47.826 0.00 0.00 0.00 5.12
717 2574 3.933332 CCCTCTGTTCCAAATTACTCGTC 59.067 47.826 0.00 0.00 0.00 4.20
718 2575 3.581332 TCCCTCTGTTCCAAATTACTCGT 59.419 43.478 0.00 0.00 0.00 4.18
719 2576 4.184629 CTCCCTCTGTTCCAAATTACTCG 58.815 47.826 0.00 0.00 0.00 4.18
720 2577 5.167303 ACTCCCTCTGTTCCAAATTACTC 57.833 43.478 0.00 0.00 0.00 2.59
721 2578 6.893020 ATACTCCCTCTGTTCCAAATTACT 57.107 37.500 0.00 0.00 0.00 2.24
722 2579 7.393515 ACAAATACTCCCTCTGTTCCAAATTAC 59.606 37.037 0.00 0.00 0.00 1.89
723 2580 7.466804 ACAAATACTCCCTCTGTTCCAAATTA 58.533 34.615 0.00 0.00 0.00 1.40
724 2581 6.314917 ACAAATACTCCCTCTGTTCCAAATT 58.685 36.000 0.00 0.00 0.00 1.82
725 2582 5.892348 ACAAATACTCCCTCTGTTCCAAAT 58.108 37.500 0.00 0.00 0.00 2.32
726 2583 5.319043 ACAAATACTCCCTCTGTTCCAAA 57.681 39.130 0.00 0.00 0.00 3.28
727 2584 4.993705 ACAAATACTCCCTCTGTTCCAA 57.006 40.909 0.00 0.00 0.00 3.53
728 2585 4.993705 AACAAATACTCCCTCTGTTCCA 57.006 40.909 0.00 0.00 0.00 3.53
729 2586 5.561679 AGAAACAAATACTCCCTCTGTTCC 58.438 41.667 0.00 0.00 30.16 3.62
730 2587 6.149640 GGAAGAAACAAATACTCCCTCTGTTC 59.850 42.308 0.00 0.00 30.16 3.18
731 2588 6.004574 GGAAGAAACAAATACTCCCTCTGTT 58.995 40.000 0.00 0.00 0.00 3.16
732 2589 5.073144 TGGAAGAAACAAATACTCCCTCTGT 59.927 40.000 0.00 0.00 0.00 3.41
733 2590 5.560724 TGGAAGAAACAAATACTCCCTCTG 58.439 41.667 0.00 0.00 0.00 3.35
734 2591 5.843019 TGGAAGAAACAAATACTCCCTCT 57.157 39.130 0.00 0.00 0.00 3.69
735 2592 7.394641 AGAAATGGAAGAAACAAATACTCCCTC 59.605 37.037 0.00 0.00 0.00 4.30
736 2593 7.177392 CAGAAATGGAAGAAACAAATACTCCCT 59.823 37.037 0.00 0.00 0.00 4.20
737 2594 7.315890 CAGAAATGGAAGAAACAAATACTCCC 58.684 38.462 0.00 0.00 0.00 4.30
738 2595 6.808704 GCAGAAATGGAAGAAACAAATACTCC 59.191 38.462 0.00 0.00 0.00 3.85
739 2596 6.808704 GGCAGAAATGGAAGAAACAAATACTC 59.191 38.462 0.00 0.00 0.00 2.59
740 2597 6.494835 AGGCAGAAATGGAAGAAACAAATACT 59.505 34.615 0.00 0.00 0.00 2.12
741 2598 6.691508 AGGCAGAAATGGAAGAAACAAATAC 58.308 36.000 0.00 0.00 0.00 1.89
742 2599 6.916360 AGGCAGAAATGGAAGAAACAAATA 57.084 33.333 0.00 0.00 0.00 1.40
743 2600 5.813513 AGGCAGAAATGGAAGAAACAAAT 57.186 34.783 0.00 0.00 0.00 2.32
744 2601 5.612725 AAGGCAGAAATGGAAGAAACAAA 57.387 34.783 0.00 0.00 0.00 2.83
747 2604 4.984785 GTGAAAGGCAGAAATGGAAGAAAC 59.015 41.667 0.00 0.00 0.00 2.78
751 2608 4.589216 TTGTGAAAGGCAGAAATGGAAG 57.411 40.909 0.00 0.00 0.00 3.46
778 2806 0.536006 CGATCCCATTCAGGCCCTTC 60.536 60.000 0.00 0.00 35.39 3.46
779 2807 1.533711 CGATCCCATTCAGGCCCTT 59.466 57.895 0.00 0.00 35.39 3.95
1112 3147 3.365535 CCCCAGGCAAAGTTTCCG 58.634 61.111 0.00 0.00 0.00 4.30
1159 3194 1.675641 CTACCCCACAAGCTGCCAC 60.676 63.158 0.00 0.00 0.00 5.01
1180 3215 2.830370 GGGGCGGCAAATCTCAGG 60.830 66.667 12.47 0.00 0.00 3.86
1244 3279 6.902408 TCCTAACAAACACCCCGATTTATAT 58.098 36.000 0.00 0.00 0.00 0.86
1252 3287 2.554370 TTCTCCTAACAAACACCCCG 57.446 50.000 0.00 0.00 0.00 5.73
1297 3332 3.746889 CAATTCGGCGGCAGGCAA 61.747 61.111 10.53 4.61 46.16 4.52
1324 3359 0.931005 GCCAATCCTACGCGAAAGAG 59.069 55.000 15.93 3.95 0.00 2.85
1342 3377 2.014857 GAATCCTTAACCTCAACCGGC 58.985 52.381 0.00 0.00 0.00 6.13
1395 3430 1.308326 CCCAAATTCCGGCCCCTAA 59.692 57.895 0.00 0.00 0.00 2.69
1403 3438 2.887360 CTGCTGCCCCAAATTCCG 59.113 61.111 0.00 0.00 0.00 4.30
1469 3504 4.930405 TGAACACTGCGATTCGGTTAAATA 59.070 37.500 8.34 0.00 30.14 1.40
1482 3517 1.225855 TTTAGCCTGTGAACACTGCG 58.774 50.000 6.51 2.38 35.80 5.18
1490 3525 5.560724 ACTAGAAGCAATTTTAGCCTGTGA 58.439 37.500 0.00 0.00 0.00 3.58
1513 3548 0.597568 CCCAAGCAGCACGATTCAAA 59.402 50.000 0.00 0.00 0.00 2.69
1568 3603 2.099621 CGTAACAGCATAGTCGTCGAC 58.900 52.381 17.70 17.70 0.00 4.20
1586 3621 2.383527 GCAGAGCTAACTTGCGCGT 61.384 57.895 8.43 0.00 37.81 6.01
1641 3676 2.489329 CGACATGCTTTCCTTGGTGATT 59.511 45.455 0.00 0.00 0.00 2.57
1684 3719 3.523972 GGTTGACTCTTAATTCCCTCCCT 59.476 47.826 0.00 0.00 0.00 4.20
1721 3756 5.841957 GTGGCTATCACCAAGAAATTGAT 57.158 39.130 0.00 0.00 42.70 2.57
1852 3887 3.359695 TTCACCCTAATCCTTTTCCCG 57.640 47.619 0.00 0.00 0.00 5.14
1873 3908 4.832823 CCTACTCCAACCAAACCAAAATCT 59.167 41.667 0.00 0.00 0.00 2.40
1887 3922 2.805295 CGTGTCTTGCAACCTACTCCAA 60.805 50.000 0.00 0.00 0.00 3.53
2103 4138 6.926313 TCCAAATTTACAAAACCCCTTATCG 58.074 36.000 0.00 0.00 0.00 2.92
2562 4600 7.266905 ACCACATAAACCTGGATAAACTACT 57.733 36.000 0.00 0.00 0.00 2.57
2588 4626 3.589988 CACTGGAGCTGTAACTAACCAG 58.410 50.000 11.25 11.25 46.78 4.00
2590 4628 2.028020 AGCACTGGAGCTGTAACTAACC 60.028 50.000 0.00 0.00 44.66 2.85
2609 4647 8.616076 AGACAGTAAGACAAATATATTGCAAGC 58.384 33.333 4.94 0.00 0.00 4.01
2619 4657 8.935844 CATTAACAGCAGACAGTAAGACAAATA 58.064 33.333 0.00 0.00 0.00 1.40
2624 4662 7.602517 ATTCATTAACAGCAGACAGTAAGAC 57.397 36.000 0.00 0.00 0.00 3.01
2629 4667 9.448438 TGTATTTATTCATTAACAGCAGACAGT 57.552 29.630 0.00 0.00 0.00 3.55
2630 4668 9.708222 GTGTATTTATTCATTAACAGCAGACAG 57.292 33.333 0.00 0.00 0.00 3.51
2631 4669 9.448438 AGTGTATTTATTCATTAACAGCAGACA 57.552 29.630 0.00 0.00 0.00 3.41
2632 4670 9.708222 CAGTGTATTTATTCATTAACAGCAGAC 57.292 33.333 0.00 0.00 0.00 3.51
2721 4767 8.806429 TTCAATATTGTGCAAGGATTCTTAGA 57.194 30.769 14.97 0.00 0.00 2.10
2889 4940 8.488668 GGAATAACAGAGTTATAACCAAGGGTA 58.511 37.037 12.05 3.63 33.12 3.69
2959 5010 5.862924 ACAGGTAATTCAACAGAATCGTG 57.137 39.130 0.00 0.00 30.96 4.35
3002 5053 4.461405 CAGCATCTCTGAAAAAGAACACG 58.539 43.478 0.00 0.00 45.72 4.49
3047 5098 1.541588 GTGAATCCTCAGCCACAAACC 59.458 52.381 0.00 0.00 30.14 3.27
3206 5257 5.872617 GGTGTATGTGCACTGTTGATAAGTA 59.127 40.000 19.41 0.00 39.21 2.24
3342 5393 2.498056 CCGGGCTTGCCAGTTTTGT 61.498 57.895 14.04 0.00 0.00 2.83
3400 5451 0.976073 ATTCTCATGTCGTCCCCGGT 60.976 55.000 0.00 0.00 33.95 5.28
3408 5459 3.727079 GCTTGAGCAACATTCTCATGTCG 60.727 47.826 0.00 0.00 43.34 4.35
3413 5464 1.538512 GCAGCTTGAGCAACATTCTCA 59.461 47.619 5.70 0.00 45.16 3.27
3417 5468 1.958579 TCTTGCAGCTTGAGCAACATT 59.041 42.857 5.88 0.00 46.13 2.71
3432 5483 2.440539 TCTTCTTCTCCGTGTCTTGC 57.559 50.000 0.00 0.00 0.00 4.01
3468 5519 1.893210 GCCTCTAGTCTGTCCACCTGT 60.893 57.143 0.00 0.00 0.00 4.00
3642 5693 3.031736 ACTAGTTAGCCATCATGTCGGT 58.968 45.455 0.00 0.00 0.00 4.69
3701 5753 3.124466 CCTAACACGACGCAAATCAATCA 59.876 43.478 0.00 0.00 0.00 2.57
3727 5779 1.065401 CACAACGTGGCACAGTGAATT 59.935 47.619 22.67 4.29 41.80 2.17
3729 5781 0.391793 TCACAACGTGGCACAGTGAA 60.392 50.000 25.51 14.57 41.80 3.18
3730 5782 0.391793 TTCACAACGTGGCACAGTGA 60.392 50.000 24.54 24.54 41.80 3.41
3731 5783 0.449786 TTTCACAACGTGGCACAGTG 59.550 50.000 19.09 20.65 41.80 3.66
3732 5784 0.732571 CTTTCACAACGTGGCACAGT 59.267 50.000 19.09 13.40 41.80 3.55
3733 5785 0.732571 ACTTTCACAACGTGGCACAG 59.267 50.000 19.09 12.74 41.80 3.66
3734 5786 0.449786 CACTTTCACAACGTGGCACA 59.550 50.000 19.09 0.00 33.87 4.57
3735 5787 0.450184 ACACTTTCACAACGTGGCAC 59.550 50.000 7.79 7.79 33.87 5.01
3743 5808 4.496360 TCAGACGTGTTACACTTTCACAA 58.504 39.130 13.86 0.00 31.34 3.33
3758 5823 0.029834 ACACGCGTAGTTTCAGACGT 59.970 50.000 13.44 0.00 41.13 4.34
3762 5827 1.060713 CAGGACACGCGTAGTTTCAG 58.939 55.000 13.44 0.00 31.38 3.02
3833 5900 4.748277 ATGCAAATAGCCAATGAGCTTT 57.252 36.364 0.00 0.00 41.41 3.51
3847 5914 3.447229 GGCACTACCCAGTAAATGCAAAT 59.553 43.478 0.00 0.00 34.12 2.32
3868 5935 1.165907 TCAAACGGAACTGCTGCTGG 61.166 55.000 11.29 1.84 0.00 4.85
3873 5940 4.134563 AGTAATTGTCAAACGGAACTGCT 58.865 39.130 0.00 0.00 0.00 4.24
3902 5969 3.907894 TGCAAAAACGTCTTATGGGAC 57.092 42.857 0.00 0.00 0.00 4.46
3903 5970 3.305064 GCTTGCAAAAACGTCTTATGGGA 60.305 43.478 0.00 0.00 0.00 4.37
3904 5971 2.986479 GCTTGCAAAAACGTCTTATGGG 59.014 45.455 0.00 0.00 0.00 4.00
3905 5972 3.900941 AGCTTGCAAAAACGTCTTATGG 58.099 40.909 0.00 0.00 0.00 2.74
3906 5973 6.086222 ACATAGCTTGCAAAAACGTCTTATG 58.914 36.000 0.00 3.30 0.00 1.90
3907 5974 6.254281 ACATAGCTTGCAAAAACGTCTTAT 57.746 33.333 0.00 0.00 0.00 1.73
3908 5975 5.682943 ACATAGCTTGCAAAAACGTCTTA 57.317 34.783 0.00 0.00 0.00 2.10
3909 5976 4.568152 ACATAGCTTGCAAAAACGTCTT 57.432 36.364 0.00 0.00 0.00 3.01
3910 5977 4.568152 AACATAGCTTGCAAAAACGTCT 57.432 36.364 0.00 0.00 0.00 4.18
3911 5978 6.140110 TCTAAACATAGCTTGCAAAAACGTC 58.860 36.000 0.00 0.00 0.00 4.34
3912 5979 6.067263 TCTAAACATAGCTTGCAAAAACGT 57.933 33.333 0.00 0.00 0.00 3.99
3913 5980 6.984740 TTCTAAACATAGCTTGCAAAAACG 57.015 33.333 0.00 0.00 0.00 3.60
3914 5981 7.787480 CGTTTTCTAAACATAGCTTGCAAAAAC 59.213 33.333 0.00 2.74 32.42 2.43
3915 5982 7.489757 ACGTTTTCTAAACATAGCTTGCAAAAA 59.510 29.630 0.00 0.00 0.00 1.94
3916 5983 6.975772 ACGTTTTCTAAACATAGCTTGCAAAA 59.024 30.769 0.00 0.00 0.00 2.44
3917 5984 6.500041 ACGTTTTCTAAACATAGCTTGCAAA 58.500 32.000 0.00 0.00 0.00 3.68
3918 5985 6.017440 AGACGTTTTCTAAACATAGCTTGCAA 60.017 34.615 0.00 0.00 30.17 4.08
3919 5986 5.468746 AGACGTTTTCTAAACATAGCTTGCA 59.531 36.000 0.00 0.00 30.17 4.08
3920 5987 5.928153 AGACGTTTTCTAAACATAGCTTGC 58.072 37.500 0.00 0.00 30.17 4.01
3928 5995 8.723311 CCCACAATATAAGACGTTTTCTAAACA 58.277 33.333 0.00 0.00 32.51 2.83
3929 5996 8.938906 TCCCACAATATAAGACGTTTTCTAAAC 58.061 33.333 0.00 0.00 32.51 2.01
3930 5997 8.938906 GTCCCACAATATAAGACGTTTTCTAAA 58.061 33.333 0.00 0.00 32.51 1.85
3931 5998 7.276218 CGTCCCACAATATAAGACGTTTTCTAA 59.724 37.037 0.00 0.00 43.89 2.10
3932 5999 6.753279 CGTCCCACAATATAAGACGTTTTCTA 59.247 38.462 0.00 0.00 43.89 2.10
3933 6000 5.579511 CGTCCCACAATATAAGACGTTTTCT 59.420 40.000 0.00 0.00 43.89 2.52
3934 6001 5.220529 CCGTCCCACAATATAAGACGTTTTC 60.221 44.000 9.63 0.00 46.62 2.29
3935 6002 4.632688 CCGTCCCACAATATAAGACGTTTT 59.367 41.667 9.63 0.00 46.62 2.43
3936 6003 4.186159 CCGTCCCACAATATAAGACGTTT 58.814 43.478 9.63 0.00 46.62 3.60
3937 6004 3.431207 CCCGTCCCACAATATAAGACGTT 60.431 47.826 9.63 0.00 46.62 3.99
3938 6005 2.101917 CCCGTCCCACAATATAAGACGT 59.898 50.000 9.63 0.00 46.62 4.34
3940 6007 2.701951 TCCCCGTCCCACAATATAAGAC 59.298 50.000 0.00 0.00 0.00 3.01
3941 6008 2.701951 GTCCCCGTCCCACAATATAAGA 59.298 50.000 0.00 0.00 0.00 2.10
3942 6009 2.547218 CGTCCCCGTCCCACAATATAAG 60.547 54.545 0.00 0.00 0.00 1.73
3943 6010 1.413445 CGTCCCCGTCCCACAATATAA 59.587 52.381 0.00 0.00 0.00 0.98
3944 6011 1.042229 CGTCCCCGTCCCACAATATA 58.958 55.000 0.00 0.00 0.00 0.86
3945 6012 1.692173 CCGTCCCCGTCCCACAATAT 61.692 60.000 0.00 0.00 0.00 1.28
3946 6013 2.360767 CCGTCCCCGTCCCACAATA 61.361 63.158 0.00 0.00 0.00 1.90
3947 6014 3.712907 CCGTCCCCGTCCCACAAT 61.713 66.667 0.00 0.00 0.00 2.71
3948 6015 4.938074 TCCGTCCCCGTCCCACAA 62.938 66.667 0.00 0.00 0.00 3.33
3953 6020 2.843912 TACTTCCTCCGTCCCCGTCC 62.844 65.000 0.00 0.00 0.00 4.79
3954 6021 1.379044 TACTTCCTCCGTCCCCGTC 60.379 63.158 0.00 0.00 0.00 4.79
3955 6022 1.379576 CTACTTCCTCCGTCCCCGT 60.380 63.158 0.00 0.00 0.00 5.28
3956 6023 0.969409 AACTACTTCCTCCGTCCCCG 60.969 60.000 0.00 0.00 0.00 5.73
3957 6024 1.206610 GAAACTACTTCCTCCGTCCCC 59.793 57.143 0.00 0.00 0.00 4.81
3958 6025 1.897802 TGAAACTACTTCCTCCGTCCC 59.102 52.381 0.00 0.00 32.53 4.46
3959 6026 3.889520 ATGAAACTACTTCCTCCGTCC 57.110 47.619 0.00 0.00 32.53 4.79
3960 6027 4.865365 CAGAATGAAACTACTTCCTCCGTC 59.135 45.833 0.00 0.00 39.69 4.79
3961 6028 4.322801 CCAGAATGAAACTACTTCCTCCGT 60.323 45.833 0.00 0.00 39.69 4.69
3962 6029 4.184629 CCAGAATGAAACTACTTCCTCCG 58.815 47.826 0.00 0.00 39.69 4.63
3963 6030 5.167303 ACCAGAATGAAACTACTTCCTCC 57.833 43.478 0.00 0.00 39.69 4.30
3964 6031 6.987404 GGATACCAGAATGAAACTACTTCCTC 59.013 42.308 0.00 0.00 39.69 3.71
3965 6032 6.407074 CGGATACCAGAATGAAACTACTTCCT 60.407 42.308 0.00 0.00 39.69 3.36
3966 6033 5.753921 CGGATACCAGAATGAAACTACTTCC 59.246 44.000 0.00 0.00 39.69 3.46
3967 6034 6.338937 ACGGATACCAGAATGAAACTACTTC 58.661 40.000 0.00 0.00 39.69 3.01
3968 6035 6.295719 ACGGATACCAGAATGAAACTACTT 57.704 37.500 0.00 0.00 39.69 2.24
3969 6036 5.934402 ACGGATACCAGAATGAAACTACT 57.066 39.130 0.00 0.00 39.69 2.57
3970 6037 6.370718 ACAAACGGATACCAGAATGAAACTAC 59.629 38.462 0.00 0.00 39.69 2.73
3971 6038 6.469410 ACAAACGGATACCAGAATGAAACTA 58.531 36.000 0.00 0.00 39.69 2.24
3984 6051 2.415512 GACCTGCTCAACAAACGGATAC 59.584 50.000 0.00 0.00 0.00 2.24
3986 6053 1.523758 GACCTGCTCAACAAACGGAT 58.476 50.000 0.00 0.00 0.00 4.18
3993 6060 0.550914 AAACCTGGACCTGCTCAACA 59.449 50.000 0.00 0.00 0.00 3.33
3994 6061 0.954452 CAAACCTGGACCTGCTCAAC 59.046 55.000 0.00 0.00 0.00 3.18
3997 6064 0.398318 AGTCAAACCTGGACCTGCTC 59.602 55.000 0.00 0.00 35.89 4.26
4019 6269 4.090761 ACATTGAAGACTGGCTCAAAGA 57.909 40.909 5.40 0.00 0.00 2.52
4027 6277 6.330278 TCGTAATGACTACATTGAAGACTGG 58.670 40.000 0.00 0.00 44.97 4.00
4028 6278 6.020281 GCTCGTAATGACTACATTGAAGACTG 60.020 42.308 0.00 0.00 44.97 3.51
4051 6409 2.611224 GCCAATTACTTGCTTGCTTGCT 60.611 45.455 3.47 0.00 0.00 3.91
4052 6410 1.728425 GCCAATTACTTGCTTGCTTGC 59.272 47.619 0.00 0.00 0.00 4.01
4059 6417 6.901081 AAGTTTAGAAGCCAATTACTTGCT 57.099 33.333 0.00 0.00 0.00 3.91
4060 6418 6.128822 GCAAAGTTTAGAAGCCAATTACTTGC 60.129 38.462 0.00 0.00 0.00 4.01
4061 6419 7.147976 AGCAAAGTTTAGAAGCCAATTACTTG 58.852 34.615 0.00 0.00 0.00 3.16
4062 6420 7.290110 AGCAAAGTTTAGAAGCCAATTACTT 57.710 32.000 0.00 0.00 0.00 2.24
4070 6428 1.468914 CCGGAGCAAAGTTTAGAAGCC 59.531 52.381 0.00 0.00 0.00 4.35
4131 6489 2.104729 GGCATCGCCGTTACCGTA 59.895 61.111 0.00 0.00 39.62 4.02
4178 6812 2.031465 GGAAACGCCGGGTCAGAA 59.969 61.111 2.18 0.00 0.00 3.02
4208 6849 2.092838 CCTTAAAACGAAGCAGCGAGAG 59.907 50.000 5.21 0.00 34.83 3.20
4224 6865 7.469537 TTTGTTTCTTTGTCTTGGTCCTTAA 57.530 32.000 0.00 0.00 0.00 1.85
4225 6866 7.654022 ATTTGTTTCTTTGTCTTGGTCCTTA 57.346 32.000 0.00 0.00 0.00 2.69
4271 6912 1.026718 AAGGAACATGCTACTGGCGC 61.027 55.000 0.00 0.00 45.43 6.53
4297 6940 4.095036 GCTTATTTGGTACTCCTTCAGTGC 59.905 45.833 0.00 0.00 36.43 4.40
4326 6969 3.119065 TGGTTACGACGCCATAAATGAGA 60.119 43.478 0.00 0.00 0.00 3.27
4351 6994 0.883370 GAGAGCCCAAACGAAACCGT 60.883 55.000 0.00 0.00 42.82 4.83
4389 7041 2.017049 CCCAAATGGAACGATGGTCTC 58.983 52.381 0.00 0.00 37.39 3.36
4390 7042 1.354368 ACCCAAATGGAACGATGGTCT 59.646 47.619 0.00 0.00 37.39 3.85
4391 7043 1.834188 ACCCAAATGGAACGATGGTC 58.166 50.000 0.00 0.00 37.39 4.02
4393 7045 3.085533 TGTAACCCAAATGGAACGATGG 58.914 45.455 0.00 0.00 37.39 3.51
4394 7046 4.775058 TTGTAACCCAAATGGAACGATG 57.225 40.909 0.00 0.00 37.39 3.84
4395 7047 6.184789 ACTATTGTAACCCAAATGGAACGAT 58.815 36.000 0.00 4.66 36.44 3.73
4396 7048 5.562635 ACTATTGTAACCCAAATGGAACGA 58.437 37.500 0.00 0.00 36.44 3.85
4399 7051 9.535170 TGAAATACTATTGTAACCCAAATGGAA 57.465 29.630 0.00 0.00 36.44 3.53
4400 7052 8.962679 GTGAAATACTATTGTAACCCAAATGGA 58.037 33.333 0.00 0.00 36.44 3.41
4404 7056 9.575868 TCAAGTGAAATACTATTGTAACCCAAA 57.424 29.630 0.00 0.00 39.18 3.28
4405 7057 9.226606 CTCAAGTGAAATACTATTGTAACCCAA 57.773 33.333 0.00 0.00 39.18 4.12
4406 7058 7.827236 CCTCAAGTGAAATACTATTGTAACCCA 59.173 37.037 0.00 0.00 39.18 4.51
4408 7060 9.444600 TTCCTCAAGTGAAATACTATTGTAACC 57.555 33.333 0.00 0.00 39.18 2.85
4412 7064 8.918202 TGTTTCCTCAAGTGAAATACTATTGT 57.082 30.769 0.00 0.00 39.18 2.71
4418 7070 8.169268 CGAGTAATGTTTCCTCAAGTGAAATAC 58.831 37.037 0.00 0.00 34.50 1.89
4419 7071 7.876068 ACGAGTAATGTTTCCTCAAGTGAAATA 59.124 33.333 0.00 0.00 34.50 1.40
4421 7073 6.018262 CACGAGTAATGTTTCCTCAAGTGAAA 60.018 38.462 0.00 0.00 0.00 2.69
4422 7074 5.465390 CACGAGTAATGTTTCCTCAAGTGAA 59.535 40.000 0.00 0.00 0.00 3.18
4423 7075 4.988540 CACGAGTAATGTTTCCTCAAGTGA 59.011 41.667 0.00 0.00 0.00 3.41
4424 7076 4.152402 CCACGAGTAATGTTTCCTCAAGTG 59.848 45.833 0.00 0.00 0.00 3.16
4426 7078 4.566004 TCCACGAGTAATGTTTCCTCAAG 58.434 43.478 0.00 0.00 0.00 3.02
4427 7079 4.610605 TCCACGAGTAATGTTTCCTCAA 57.389 40.909 0.00 0.00 0.00 3.02
4428 7080 4.221924 TCATCCACGAGTAATGTTTCCTCA 59.778 41.667 0.00 0.00 0.00 3.86
4429 7081 4.755411 TCATCCACGAGTAATGTTTCCTC 58.245 43.478 0.00 0.00 0.00 3.71
4430 7082 4.819105 TCATCCACGAGTAATGTTTCCT 57.181 40.909 0.00 0.00 0.00 3.36
4431 7083 5.873179 TTTCATCCACGAGTAATGTTTCC 57.127 39.130 0.00 0.00 0.00 3.13
4433 7085 7.148137 GGGTATTTTCATCCACGAGTAATGTTT 60.148 37.037 0.00 0.00 0.00 2.83
4434 7086 6.317893 GGGTATTTTCATCCACGAGTAATGTT 59.682 38.462 0.00 0.00 0.00 2.71
4435 7087 5.820947 GGGTATTTTCATCCACGAGTAATGT 59.179 40.000 0.00 0.00 0.00 2.71
4436 7088 6.055588 AGGGTATTTTCATCCACGAGTAATG 58.944 40.000 0.00 0.00 0.00 1.90
4438 7090 5.687166 AGGGTATTTTCATCCACGAGTAA 57.313 39.130 0.00 0.00 0.00 2.24
4439 7091 5.687166 AAGGGTATTTTCATCCACGAGTA 57.313 39.130 0.00 0.00 0.00 2.59
4441 7093 5.897377 AAAAGGGTATTTTCATCCACGAG 57.103 39.130 0.00 0.00 0.00 4.18
4442 7094 5.106475 CGAAAAAGGGTATTTTCATCCACGA 60.106 40.000 11.64 0.00 45.35 4.35
4443 7095 5.092781 CGAAAAAGGGTATTTTCATCCACG 58.907 41.667 11.64 0.00 45.35 4.94
4444 7096 6.262193 TCGAAAAAGGGTATTTTCATCCAC 57.738 37.500 11.64 0.00 45.35 4.02
4445 7097 6.902771 TTCGAAAAAGGGTATTTTCATCCA 57.097 33.333 11.64 0.00 45.35 3.41
4486 7138 3.255642 GGAGCACAAATTACTTCCAGCAA 59.744 43.478 0.00 0.00 0.00 3.91
4487 7139 2.819608 GGAGCACAAATTACTTCCAGCA 59.180 45.455 0.00 0.00 0.00 4.41
4489 7141 3.690460 AGGGAGCACAAATTACTTCCAG 58.310 45.455 0.00 0.00 30.71 3.86
4490 7142 3.561313 GGAGGGAGCACAAATTACTTCCA 60.561 47.826 0.00 0.00 30.71 3.53
4491 7143 3.017442 GGAGGGAGCACAAATTACTTCC 58.983 50.000 0.00 0.00 0.00 3.46
4492 7144 2.678336 CGGAGGGAGCACAAATTACTTC 59.322 50.000 0.00 0.00 0.00 3.01
4494 7146 1.628846 ACGGAGGGAGCACAAATTACT 59.371 47.619 0.00 0.00 0.00 2.24
4495 7147 2.007608 GACGGAGGGAGCACAAATTAC 58.992 52.381 0.00 0.00 0.00 1.89
4496 7148 1.906574 AGACGGAGGGAGCACAAATTA 59.093 47.619 0.00 0.00 0.00 1.40
4497 7149 0.693049 AGACGGAGGGAGCACAAATT 59.307 50.000 0.00 0.00 0.00 1.82
4498 7150 1.207329 GTAGACGGAGGGAGCACAAAT 59.793 52.381 0.00 0.00 0.00 2.32
4499 7151 0.606604 GTAGACGGAGGGAGCACAAA 59.393 55.000 0.00 0.00 0.00 2.83
4500 7152 0.541063 TGTAGACGGAGGGAGCACAA 60.541 55.000 0.00 0.00 0.00 3.33
4501 7153 0.541063 TTGTAGACGGAGGGAGCACA 60.541 55.000 0.00 0.00 0.00 4.57
4502 7154 0.173708 CTTGTAGACGGAGGGAGCAC 59.826 60.000 0.00 0.00 0.00 4.40
4504 7156 0.971447 ACCTTGTAGACGGAGGGAGC 60.971 60.000 6.79 0.00 34.81 4.70
4505 7157 1.558233 AACCTTGTAGACGGAGGGAG 58.442 55.000 6.79 0.00 34.81 4.30
4506 7158 2.042162 ACTAACCTTGTAGACGGAGGGA 59.958 50.000 6.79 0.00 34.81 4.20
4507 7159 2.454538 ACTAACCTTGTAGACGGAGGG 58.545 52.381 6.79 0.00 34.81 4.30
4508 7160 4.012374 TGTACTAACCTTGTAGACGGAGG 58.988 47.826 0.00 1.51 36.62 4.30
4509 7161 5.392811 CCTTGTACTAACCTTGTAGACGGAG 60.393 48.000 0.00 0.00 28.44 4.63
4510 7162 4.460382 CCTTGTACTAACCTTGTAGACGGA 59.540 45.833 0.00 0.00 28.44 4.69
4512 7164 5.382618 ACCTTGTACTAACCTTGTAGACG 57.617 43.478 0.00 0.00 0.00 4.18
4513 7165 6.519382 ACAACCTTGTACTAACCTTGTAGAC 58.481 40.000 0.00 0.00 40.16 2.59
4544 7196 9.481340 CCTCAGTCTCAAAATTAATATCGATGA 57.519 33.333 8.54 0.00 0.00 2.92
4545 7197 9.265901 ACCTCAGTCTCAAAATTAATATCGATG 57.734 33.333 8.54 0.00 0.00 3.84
4547 7199 9.967346 CTACCTCAGTCTCAAAATTAATATCGA 57.033 33.333 0.00 0.00 0.00 3.59
4548 7200 9.751542 ACTACCTCAGTCTCAAAATTAATATCG 57.248 33.333 0.00 0.00 28.33 2.92
4558 7210 9.393512 GAGTAATACTACTACCTCAGTCTCAAA 57.606 37.037 0.00 0.00 38.55 2.69
4559 7211 8.546322 TGAGTAATACTACTACCTCAGTCTCAA 58.454 37.037 0.00 0.00 38.55 3.02
4560 7212 8.087303 TGAGTAATACTACTACCTCAGTCTCA 57.913 38.462 0.00 0.00 38.55 3.27
4561 7213 8.961294 TTGAGTAATACTACTACCTCAGTCTC 57.039 38.462 0.00 0.00 38.55 3.36
4562 7214 9.176460 GTTTGAGTAATACTACTACCTCAGTCT 57.824 37.037 0.00 0.00 38.55 3.24
4563 7215 9.176460 AGTTTGAGTAATACTACTACCTCAGTC 57.824 37.037 0.00 0.00 38.55 3.51
4666 7593 1.208535 TCGATACGCCCACTTGGAAAT 59.791 47.619 0.00 0.00 37.39 2.17
4679 7606 0.847035 GCGAGGCTTTCTTCGATACG 59.153 55.000 1.04 0.00 0.00 3.06
4696 7623 1.135373 TCTCGAACCTCTTGCTAAGCG 60.135 52.381 0.00 0.00 0.00 4.68
4697 7624 2.656560 TCTCGAACCTCTTGCTAAGC 57.343 50.000 0.00 0.00 0.00 3.09
4720 7648 8.778059 ACATTTGTATATCCCTTTTCTACCTGA 58.222 33.333 0.00 0.00 0.00 3.86
4721 7649 8.980481 ACATTTGTATATCCCTTTTCTACCTG 57.020 34.615 0.00 0.00 0.00 4.00
4737 7665 9.962783 GATACCGTCTAGTTTCTACATTTGTAT 57.037 33.333 0.00 0.00 0.00 2.29
4738 7666 8.959548 TGATACCGTCTAGTTTCTACATTTGTA 58.040 33.333 0.00 0.00 0.00 2.41
4739 7667 7.758528 GTGATACCGTCTAGTTTCTACATTTGT 59.241 37.037 0.00 0.00 0.00 2.83
4740 7668 7.974501 AGTGATACCGTCTAGTTTCTACATTTG 59.025 37.037 0.00 0.00 0.00 2.32
4741 7669 7.974501 CAGTGATACCGTCTAGTTTCTACATTT 59.025 37.037 0.00 0.00 0.00 2.32
4742 7670 7.416438 CCAGTGATACCGTCTAGTTTCTACATT 60.416 40.741 0.00 0.00 0.00 2.71
4743 7671 6.039493 CCAGTGATACCGTCTAGTTTCTACAT 59.961 42.308 0.00 0.00 0.00 2.29
4744 7672 5.356190 CCAGTGATACCGTCTAGTTTCTACA 59.644 44.000 0.00 0.00 0.00 2.74
4745 7673 5.356470 ACCAGTGATACCGTCTAGTTTCTAC 59.644 44.000 0.00 0.00 0.00 2.59
4746 7674 5.503927 ACCAGTGATACCGTCTAGTTTCTA 58.496 41.667 0.00 0.00 0.00 2.10
4747 7675 4.342359 ACCAGTGATACCGTCTAGTTTCT 58.658 43.478 0.00 0.00 0.00 2.52
4748 7676 4.715527 ACCAGTGATACCGTCTAGTTTC 57.284 45.455 0.00 0.00 0.00 2.78
4749 7677 4.771054 AGAACCAGTGATACCGTCTAGTTT 59.229 41.667 0.00 0.00 0.00 2.66
4750 7678 4.158025 CAGAACCAGTGATACCGTCTAGTT 59.842 45.833 0.00 0.00 0.00 2.24
4751 7679 3.695060 CAGAACCAGTGATACCGTCTAGT 59.305 47.826 0.00 0.00 0.00 2.57
4752 7680 3.066900 CCAGAACCAGTGATACCGTCTAG 59.933 52.174 0.00 0.00 0.00 2.43
4753 7681 3.021695 CCAGAACCAGTGATACCGTCTA 58.978 50.000 0.00 0.00 0.00 2.59
4754 7682 1.825474 CCAGAACCAGTGATACCGTCT 59.175 52.381 0.00 0.00 0.00 4.18
4755 7683 1.739371 GCCAGAACCAGTGATACCGTC 60.739 57.143 0.00 0.00 0.00 4.79
4756 7684 0.249398 GCCAGAACCAGTGATACCGT 59.751 55.000 0.00 0.00 0.00 4.83
4757 7685 0.249120 TGCCAGAACCAGTGATACCG 59.751 55.000 0.00 0.00 0.00 4.02
4758 7686 2.359900 CTTGCCAGAACCAGTGATACC 58.640 52.381 0.00 0.00 0.00 2.73
4759 7687 2.290323 ACCTTGCCAGAACCAGTGATAC 60.290 50.000 0.00 0.00 0.00 2.24
4760 7688 1.985159 ACCTTGCCAGAACCAGTGATA 59.015 47.619 0.00 0.00 0.00 2.15
4761 7689 0.773644 ACCTTGCCAGAACCAGTGAT 59.226 50.000 0.00 0.00 0.00 3.06
4762 7690 1.429930 TACCTTGCCAGAACCAGTGA 58.570 50.000 0.00 0.00 0.00 3.41
4763 7691 2.270352 TTACCTTGCCAGAACCAGTG 57.730 50.000 0.00 0.00 0.00 3.66
4764 7692 3.587506 ACTATTACCTTGCCAGAACCAGT 59.412 43.478 0.00 0.00 0.00 4.00
4765 7693 4.192317 GACTATTACCTTGCCAGAACCAG 58.808 47.826 0.00 0.00 0.00 4.00
4766 7694 3.054655 GGACTATTACCTTGCCAGAACCA 60.055 47.826 0.00 0.00 0.00 3.67
4767 7695 3.200165 AGGACTATTACCTTGCCAGAACC 59.800 47.826 0.00 0.00 33.55 3.62
4768 7696 4.081087 TCAGGACTATTACCTTGCCAGAAC 60.081 45.833 0.00 0.00 35.35 3.01
4769 7697 4.101114 TCAGGACTATTACCTTGCCAGAA 58.899 43.478 0.00 0.00 35.35 3.02
4770 7698 3.719871 TCAGGACTATTACCTTGCCAGA 58.280 45.455 0.00 0.00 35.35 3.86
4771 7699 4.192317 GTTCAGGACTATTACCTTGCCAG 58.808 47.826 0.00 0.00 35.35 4.85
4772 7700 3.585289 TGTTCAGGACTATTACCTTGCCA 59.415 43.478 0.00 0.00 35.35 4.92
4773 7701 4.216411 TGTTCAGGACTATTACCTTGCC 57.784 45.455 0.00 0.00 35.35 4.52
4774 7702 7.859325 TTTATGTTCAGGACTATTACCTTGC 57.141 36.000 0.00 0.00 35.35 4.01
4802 7730 9.596308 AAGAAAAACACCCCATTTACTAAGTAT 57.404 29.630 0.00 0.00 0.00 2.12
4803 7731 8.999905 AAGAAAAACACCCCATTTACTAAGTA 57.000 30.769 0.00 0.00 0.00 2.24
4804 7732 7.907841 AAGAAAAACACCCCATTTACTAAGT 57.092 32.000 0.00 0.00 0.00 2.24


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.