Multiple sequence alignment - TraesCS2B01G350800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G350800 chr2B 100.000 2822 0 0 883 3704 497862150 497859329 0.000000e+00 5212
1 TraesCS2B01G350800 chr2B 100.000 456 0 0 1 456 497863032 497862577 0.000000e+00 843
2 TraesCS2B01G350800 chr2B 95.510 245 11 0 1 245 316103844 316104088 3.470000e-105 392
3 TraesCS2B01G350800 chr2B 93.952 248 14 1 1 248 640687380 640687134 1.260000e-99 374
4 TraesCS2B01G350800 chr2B 94.215 242 14 0 1 242 643686997 643687238 1.620000e-98 370
5 TraesCS2B01G350800 chr2B 89.262 149 13 2 1507 1653 151653834 151653687 2.270000e-42 183
6 TraesCS2B01G350800 chr2D 92.985 1511 56 20 2234 3704 423878184 423876684 0.000000e+00 2158
7 TraesCS2B01G350800 chr2D 89.634 656 35 15 885 1508 423879665 423879011 0.000000e+00 804
8 TraesCS2B01G350800 chr2D 88.859 377 36 4 1831 2206 423878515 423878144 3.370000e-125 459
9 TraesCS2B01G350800 chr2D 93.500 200 11 2 257 456 423880176 423879979 2.800000e-76 296
10 TraesCS2B01G350800 chr2D 89.375 160 9 6 1507 1662 594538854 594538699 1.050000e-45 195
11 TraesCS2B01G350800 chr2A 92.379 1509 67 17 2231 3704 564497666 564499161 0.000000e+00 2106
12 TraesCS2B01G350800 chr2A 88.153 574 46 12 1655 2213 564497150 564497716 0.000000e+00 664
13 TraesCS2B01G350800 chr2A 86.560 625 40 15 897 1486 564496397 564497012 0.000000e+00 649
14 TraesCS2B01G350800 chr2A 90.000 160 14 2 297 456 564495619 564495776 4.850000e-49 206
15 TraesCS2B01G350800 chr7B 95.041 242 12 0 1 242 470296254 470296013 7.510000e-102 381
16 TraesCS2B01G350800 chr4B 95.062 243 11 1 2 244 662087660 662087419 7.510000e-102 381
17 TraesCS2B01G350800 chr3A 94.332 247 14 0 2 248 378337221 378336975 2.700000e-101 379
18 TraesCS2B01G350800 chr6B 93.976 249 15 0 1 249 589922418 589922170 9.710000e-101 377
19 TraesCS2B01G350800 chr6B 93.307 254 15 2 1 254 126998582 126998833 1.260000e-99 374
20 TraesCS2B01G350800 chr6B 87.975 158 12 4 1502 1653 469780082 469779926 2.940000e-41 180
21 TraesCS2B01G350800 chr6B 91.304 92 7 1 985 1075 372580824 372580733 1.400000e-24 124
22 TraesCS2B01G350800 chr5B 92.941 255 17 1 1 255 355401937 355401684 1.620000e-98 370
23 TraesCS2B01G350800 chr5B 86.164 159 16 5 1507 1660 536909308 536909465 2.290000e-37 167
24 TraesCS2B01G350800 chrUn 88.889 153 11 3 1507 1653 31873106 31873258 2.270000e-42 183
25 TraesCS2B01G350800 chr5A 89.262 149 13 2 1507 1653 577931144 577930997 2.270000e-42 183
26 TraesCS2B01G350800 chr4A 88.816 152 11 4 1504 1653 544034696 544034843 8.170000e-42 182
27 TraesCS2B01G350800 chr1B 89.333 150 9 3 1507 1653 376620902 376620757 8.170000e-42 182
28 TraesCS2B01G350800 chr3B 86.585 164 17 4 1507 1668 89588877 89588717 3.800000e-40 176
29 TraesCS2B01G350800 chr6D 91.089 101 7 2 985 1083 256730398 256730298 6.450000e-28 135
30 TraesCS2B01G350800 chr6A 92.391 92 6 1 985 1075 366028435 366028526 3.000000e-26 130


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G350800 chr2B 497859329 497863032 3703 True 3027.50 5212 100.0000 1 3704 2 chr2B.!!$R3 3703
1 TraesCS2B01G350800 chr2D 423876684 423880176 3492 True 929.25 2158 91.2445 257 3704 4 chr2D.!!$R2 3447
2 TraesCS2B01G350800 chr2A 564495619 564499161 3542 False 906.25 2106 89.2730 297 3704 4 chr2A.!!$F1 3407

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
210 211 0.165079 CGTGTGGGCGATGTACAAAC 59.835 55.0 0.0 0.0 0.0 2.93 F
324 325 0.252197 AACATAGTCGGTGGAAGCCC 59.748 55.0 0.0 0.0 0.0 5.19 F
1766 2120 0.042581 TGCCTCTGTATGTCCCCTCA 59.957 55.0 0.0 0.0 0.0 3.86 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1748 2102 0.466124 GTGAGGGGACATACAGAGGC 59.534 60.0 0.00 0.0 0.0 4.70 R
1825 2179 0.740149 TGCACCTTTCAGCAAGTGTG 59.260 50.0 0.00 0.0 37.9 3.82 R
3475 4169 0.110678 TGGAATGTGGCCGGTTACAA 59.889 50.0 15.22 0.0 0.0 2.41 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
31 32 8.464770 AAATTCGTCAAAACATATCAACATGG 57.535 30.769 0.00 0.00 0.00 3.66
32 33 5.559427 TCGTCAAAACATATCAACATGGG 57.441 39.130 0.00 0.00 0.00 4.00
33 34 4.397730 TCGTCAAAACATATCAACATGGGG 59.602 41.667 0.00 0.00 0.00 4.96
34 35 4.432712 GTCAAAACATATCAACATGGGGC 58.567 43.478 0.00 0.00 0.00 5.80
35 36 3.450457 TCAAAACATATCAACATGGGGCC 59.550 43.478 0.00 0.00 0.00 5.80
36 37 3.403228 AAACATATCAACATGGGGCCT 57.597 42.857 0.84 0.00 0.00 5.19
37 38 4.534647 AAACATATCAACATGGGGCCTA 57.465 40.909 0.84 0.00 0.00 3.93
38 39 4.534647 AACATATCAACATGGGGCCTAA 57.465 40.909 0.84 0.00 0.00 2.69
39 40 4.747265 ACATATCAACATGGGGCCTAAT 57.253 40.909 0.84 0.00 0.00 1.73
40 41 5.078683 ACATATCAACATGGGGCCTAATT 57.921 39.130 0.84 0.00 0.00 1.40
41 42 5.466819 ACATATCAACATGGGGCCTAATTT 58.533 37.500 0.84 0.00 0.00 1.82
42 43 5.904750 ACATATCAACATGGGGCCTAATTTT 59.095 36.000 0.84 0.00 0.00 1.82
43 44 4.758773 ATCAACATGGGGCCTAATTTTG 57.241 40.909 0.84 7.80 0.00 2.44
44 45 3.784178 TCAACATGGGGCCTAATTTTGA 58.216 40.909 13.69 13.69 0.00 2.69
45 46 4.163427 TCAACATGGGGCCTAATTTTGAA 58.837 39.130 14.73 4.15 0.00 2.69
46 47 4.222588 TCAACATGGGGCCTAATTTTGAAG 59.777 41.667 14.73 0.76 0.00 3.02
47 48 4.059773 ACATGGGGCCTAATTTTGAAGA 57.940 40.909 0.84 0.00 0.00 2.87
48 49 4.623863 ACATGGGGCCTAATTTTGAAGAT 58.376 39.130 0.84 0.00 0.00 2.40
49 50 4.651045 ACATGGGGCCTAATTTTGAAGATC 59.349 41.667 0.84 0.00 0.00 2.75
50 51 4.608170 TGGGGCCTAATTTTGAAGATCT 57.392 40.909 0.84 0.00 0.00 2.75
51 52 4.536765 TGGGGCCTAATTTTGAAGATCTC 58.463 43.478 0.84 0.00 0.00 2.75
52 53 3.565902 GGGGCCTAATTTTGAAGATCTCG 59.434 47.826 0.84 0.00 0.00 4.04
53 54 4.200092 GGGCCTAATTTTGAAGATCTCGT 58.800 43.478 0.84 0.00 0.00 4.18
54 55 4.273724 GGGCCTAATTTTGAAGATCTCGTC 59.726 45.833 0.84 0.00 0.00 4.20
55 56 4.025647 GGCCTAATTTTGAAGATCTCGTCG 60.026 45.833 0.00 0.00 0.00 5.12
56 57 4.804139 GCCTAATTTTGAAGATCTCGTCGA 59.196 41.667 0.00 0.00 0.00 4.20
57 58 5.051374 GCCTAATTTTGAAGATCTCGTCGAG 60.051 44.000 16.33 16.33 0.00 4.04
58 59 6.266323 CCTAATTTTGAAGATCTCGTCGAGA 58.734 40.000 26.15 26.15 43.20 4.04
59 60 6.197468 CCTAATTTTGAAGATCTCGTCGAGAC 59.803 42.308 26.46 18.95 41.76 3.36
73 74 3.777478 GTCGAGACGGATTTAATGGTGA 58.223 45.455 0.00 0.00 0.00 4.02
74 75 4.178540 GTCGAGACGGATTTAATGGTGAA 58.821 43.478 0.00 0.00 0.00 3.18
75 76 4.628333 GTCGAGACGGATTTAATGGTGAAA 59.372 41.667 0.00 0.00 0.00 2.69
76 77 4.868171 TCGAGACGGATTTAATGGTGAAAG 59.132 41.667 0.00 0.00 0.00 2.62
77 78 4.494199 CGAGACGGATTTAATGGTGAAAGC 60.494 45.833 0.00 0.00 0.00 3.51
78 79 3.374058 AGACGGATTTAATGGTGAAAGCG 59.626 43.478 0.00 0.00 36.92 4.68
79 80 2.422127 ACGGATTTAATGGTGAAAGCGG 59.578 45.455 0.00 0.00 36.92 5.52
80 81 2.680841 CGGATTTAATGGTGAAAGCGGA 59.319 45.455 0.00 0.00 36.92 5.54
81 82 3.315191 CGGATTTAATGGTGAAAGCGGAT 59.685 43.478 0.00 0.00 36.92 4.18
82 83 4.202010 CGGATTTAATGGTGAAAGCGGATT 60.202 41.667 0.00 0.00 36.92 3.01
83 84 5.281727 GGATTTAATGGTGAAAGCGGATTC 58.718 41.667 0.00 0.00 36.92 2.52
84 85 5.067805 GGATTTAATGGTGAAAGCGGATTCT 59.932 40.000 2.46 0.00 36.92 2.40
85 86 5.975693 TTTAATGGTGAAAGCGGATTCTT 57.024 34.783 2.46 0.00 36.92 2.52
86 87 7.201785 GGATTTAATGGTGAAAGCGGATTCTTA 60.202 37.037 2.46 0.00 36.92 2.10
87 88 6.677781 TTAATGGTGAAAGCGGATTCTTAG 57.322 37.500 2.46 0.00 36.92 2.18
88 89 3.695830 TGGTGAAAGCGGATTCTTAGT 57.304 42.857 2.46 0.00 36.92 2.24
89 90 4.015872 TGGTGAAAGCGGATTCTTAGTT 57.984 40.909 2.46 0.00 36.92 2.24
90 91 4.000988 TGGTGAAAGCGGATTCTTAGTTC 58.999 43.478 2.46 0.00 36.92 3.01
91 92 4.000988 GGTGAAAGCGGATTCTTAGTTCA 58.999 43.478 2.46 0.00 0.00 3.18
92 93 4.142881 GGTGAAAGCGGATTCTTAGTTCAC 60.143 45.833 0.00 0.00 33.69 3.18
93 94 4.691216 GTGAAAGCGGATTCTTAGTTCACT 59.309 41.667 6.42 0.00 32.62 3.41
94 95 5.179555 GTGAAAGCGGATTCTTAGTTCACTT 59.820 40.000 6.42 0.00 32.62 3.16
95 96 5.763204 TGAAAGCGGATTCTTAGTTCACTTT 59.237 36.000 0.00 0.00 0.00 2.66
96 97 6.262273 TGAAAGCGGATTCTTAGTTCACTTTT 59.738 34.615 0.00 0.00 0.00 2.27
97 98 6.635030 AAGCGGATTCTTAGTTCACTTTTT 57.365 33.333 0.00 0.00 0.00 1.94
126 127 8.871629 TTAGGAGATACAACATTTTTAAGCCA 57.128 30.769 0.00 0.00 0.00 4.75
127 128 7.775053 AGGAGATACAACATTTTTAAGCCAA 57.225 32.000 0.00 0.00 0.00 4.52
128 129 8.189119 AGGAGATACAACATTTTTAAGCCAAA 57.811 30.769 0.00 0.00 0.00 3.28
129 130 8.646900 AGGAGATACAACATTTTTAAGCCAAAA 58.353 29.630 0.00 0.00 34.26 2.44
132 133 9.051679 AGATACAACATTTTTAAGCCAAAAACC 57.948 29.630 8.31 0.00 46.19 3.27
133 134 8.738645 ATACAACATTTTTAAGCCAAAAACCA 57.261 26.923 8.31 0.00 46.19 3.67
134 135 7.454260 ACAACATTTTTAAGCCAAAAACCAA 57.546 28.000 8.31 0.00 46.19 3.67
135 136 7.886338 ACAACATTTTTAAGCCAAAAACCAAA 58.114 26.923 8.31 0.00 46.19 3.28
136 137 8.360390 ACAACATTTTTAAGCCAAAAACCAAAA 58.640 25.926 8.31 0.00 46.19 2.44
137 138 9.196552 CAACATTTTTAAGCCAAAAACCAAAAA 57.803 25.926 8.31 0.00 46.19 1.94
162 163 8.515695 AAAATTCTGCTGATGTCATCTATTCA 57.484 30.769 13.90 5.77 0.00 2.57
163 164 8.693120 AAATTCTGCTGATGTCATCTATTCAT 57.307 30.769 13.90 0.00 0.00 2.57
164 165 9.788889 AAATTCTGCTGATGTCATCTATTCATA 57.211 29.630 13.90 0.00 0.00 2.15
165 166 8.774890 ATTCTGCTGATGTCATCTATTCATAC 57.225 34.615 13.90 0.00 0.00 2.39
166 167 6.385033 TCTGCTGATGTCATCTATTCATACG 58.615 40.000 13.90 0.00 0.00 3.06
167 168 6.015940 TCTGCTGATGTCATCTATTCATACGT 60.016 38.462 13.90 0.00 0.00 3.57
168 169 6.515832 TGCTGATGTCATCTATTCATACGTT 58.484 36.000 13.90 0.00 0.00 3.99
169 170 6.421801 TGCTGATGTCATCTATTCATACGTTG 59.578 38.462 13.90 0.00 0.00 4.10
170 171 6.617317 GCTGATGTCATCTATTCATACGTTGC 60.617 42.308 13.90 0.00 0.00 4.17
171 172 6.279882 TGATGTCATCTATTCATACGTTGCA 58.720 36.000 13.90 0.00 0.00 4.08
172 173 6.760770 TGATGTCATCTATTCATACGTTGCAA 59.239 34.615 13.90 0.00 0.00 4.08
173 174 6.976636 TGTCATCTATTCATACGTTGCAAA 57.023 33.333 0.00 0.00 0.00 3.68
174 175 7.371126 TGTCATCTATTCATACGTTGCAAAA 57.629 32.000 0.00 0.00 0.00 2.44
175 176 7.984391 TGTCATCTATTCATACGTTGCAAAAT 58.016 30.769 0.00 0.00 0.00 1.82
176 177 7.909641 TGTCATCTATTCATACGTTGCAAAATG 59.090 33.333 0.00 6.03 0.00 2.32
177 178 8.122330 GTCATCTATTCATACGTTGCAAAATGA 58.878 33.333 0.00 8.45 0.00 2.57
178 179 8.337532 TCATCTATTCATACGTTGCAAAATGAG 58.662 33.333 15.78 8.66 30.53 2.90
179 180 7.609760 TCTATTCATACGTTGCAAAATGAGT 57.390 32.000 15.78 15.56 30.53 3.41
180 181 7.463544 TCTATTCATACGTTGCAAAATGAGTG 58.536 34.615 18.22 13.09 30.53 3.51
181 182 5.681337 TTCATACGTTGCAAAATGAGTGA 57.319 34.783 15.78 7.92 30.53 3.41
182 183 5.878332 TCATACGTTGCAAAATGAGTGAT 57.122 34.783 0.00 0.00 0.00 3.06
183 184 5.630061 TCATACGTTGCAAAATGAGTGATG 58.370 37.500 0.00 0.00 0.00 3.07
184 185 5.411053 TCATACGTTGCAAAATGAGTGATGA 59.589 36.000 0.00 0.00 0.00 2.92
185 186 4.771590 ACGTTGCAAAATGAGTGATGAT 57.228 36.364 0.00 0.00 0.00 2.45
186 187 5.878332 ACGTTGCAAAATGAGTGATGATA 57.122 34.783 0.00 0.00 0.00 2.15
187 188 5.872635 ACGTTGCAAAATGAGTGATGATAG 58.127 37.500 0.00 0.00 0.00 2.08
188 189 5.643348 ACGTTGCAAAATGAGTGATGATAGA 59.357 36.000 0.00 0.00 0.00 1.98
189 190 6.183360 ACGTTGCAAAATGAGTGATGATAGAG 60.183 38.462 0.00 0.00 0.00 2.43
190 191 6.493116 GTTGCAAAATGAGTGATGATAGAGG 58.507 40.000 0.00 0.00 0.00 3.69
191 192 4.577693 TGCAAAATGAGTGATGATAGAGGC 59.422 41.667 0.00 0.00 0.00 4.70
192 193 4.319333 GCAAAATGAGTGATGATAGAGGCG 60.319 45.833 0.00 0.00 0.00 5.52
193 194 4.679373 AAATGAGTGATGATAGAGGCGT 57.321 40.909 0.00 0.00 0.00 5.68
194 195 3.657015 ATGAGTGATGATAGAGGCGTG 57.343 47.619 0.00 0.00 0.00 5.34
195 196 2.379005 TGAGTGATGATAGAGGCGTGT 58.621 47.619 0.00 0.00 0.00 4.49
196 197 2.099756 TGAGTGATGATAGAGGCGTGTG 59.900 50.000 0.00 0.00 0.00 3.82
197 198 1.410517 AGTGATGATAGAGGCGTGTGG 59.589 52.381 0.00 0.00 0.00 4.17
198 199 0.752658 TGATGATAGAGGCGTGTGGG 59.247 55.000 0.00 0.00 0.00 4.61
199 200 0.601311 GATGATAGAGGCGTGTGGGC 60.601 60.000 0.00 0.00 42.69 5.36
206 207 3.192922 GGCGTGTGGGCGATGTAC 61.193 66.667 0.00 0.00 0.00 2.90
207 208 2.433491 GCGTGTGGGCGATGTACA 60.433 61.111 0.00 0.00 0.00 2.90
208 209 2.030401 GCGTGTGGGCGATGTACAA 61.030 57.895 0.00 0.00 0.00 2.41
209 210 1.570347 GCGTGTGGGCGATGTACAAA 61.570 55.000 0.00 0.00 0.00 2.83
210 211 0.165079 CGTGTGGGCGATGTACAAAC 59.835 55.000 0.00 0.00 0.00 2.93
211 212 1.231221 GTGTGGGCGATGTACAAACA 58.769 50.000 0.00 0.00 40.69 2.83
212 213 1.069500 GTGTGGGCGATGTACAAACAC 60.069 52.381 0.00 5.80 38.78 3.32
213 214 0.519961 GTGGGCGATGTACAAACACC 59.480 55.000 0.00 1.18 38.78 4.16
214 215 0.606944 TGGGCGATGTACAAACACCC 60.607 55.000 17.29 17.29 39.06 4.61
215 216 0.606944 GGGCGATGTACAAACACCCA 60.607 55.000 18.49 0.00 38.66 4.51
216 217 0.519961 GGCGATGTACAAACACCCAC 59.480 55.000 0.00 0.00 38.78 4.61
217 218 1.231221 GCGATGTACAAACACCCACA 58.769 50.000 0.00 0.00 38.78 4.17
218 219 1.069500 GCGATGTACAAACACCCACAC 60.069 52.381 0.00 0.00 38.78 3.82
219 220 1.193650 CGATGTACAAACACCCACACG 59.806 52.381 0.00 0.00 38.78 4.49
220 221 2.215196 GATGTACAAACACCCACACGT 58.785 47.619 0.00 0.00 38.78 4.49
221 222 1.370609 TGTACAAACACCCACACGTG 58.629 50.000 15.48 15.48 39.75 4.49
223 224 1.062880 GTACAAACACCCACACGTGTG 59.937 52.381 36.13 36.13 46.19 3.82
231 232 3.720531 CACACGTGTGGGCGTTAA 58.279 55.556 35.65 0.00 43.83 2.01
232 233 1.277440 CACACGTGTGGGCGTTAAC 59.723 57.895 35.65 0.00 43.83 2.01
233 234 1.153409 ACACGTGTGGGCGTTAACA 60.153 52.632 22.71 0.00 43.83 2.41
234 235 0.533308 ACACGTGTGGGCGTTAACAT 60.533 50.000 22.71 0.00 43.83 2.71
235 236 0.589223 CACGTGTGGGCGTTAACATT 59.411 50.000 7.58 0.00 43.83 2.71
236 237 1.002251 CACGTGTGGGCGTTAACATTT 60.002 47.619 7.58 0.00 43.83 2.32
237 238 1.264826 ACGTGTGGGCGTTAACATTTC 59.735 47.619 6.39 0.00 43.04 2.17
238 239 1.400500 CGTGTGGGCGTTAACATTTCC 60.400 52.381 6.39 1.91 0.00 3.13
239 240 0.875728 TGTGGGCGTTAACATTTCCG 59.124 50.000 6.39 0.00 0.00 4.30
240 241 1.158434 GTGGGCGTTAACATTTCCGA 58.842 50.000 6.39 0.00 0.00 4.55
241 242 1.536331 GTGGGCGTTAACATTTCCGAA 59.464 47.619 6.39 0.00 0.00 4.30
242 243 2.030981 GTGGGCGTTAACATTTCCGAAA 60.031 45.455 6.39 0.00 0.00 3.46
243 244 2.621998 TGGGCGTTAACATTTCCGAAAA 59.378 40.909 6.39 0.00 0.00 2.29
244 245 3.067742 TGGGCGTTAACATTTCCGAAAAA 59.932 39.130 6.39 0.00 0.00 1.94
245 246 3.426191 GGGCGTTAACATTTCCGAAAAAC 59.574 43.478 6.39 0.00 0.00 2.43
246 247 4.043073 GGCGTTAACATTTCCGAAAAACA 58.957 39.130 6.39 0.00 0.00 2.83
247 248 4.503370 GGCGTTAACATTTCCGAAAAACAA 59.497 37.500 6.39 0.00 0.00 2.83
248 249 5.176039 GGCGTTAACATTTCCGAAAAACAAT 59.824 36.000 6.39 0.00 0.00 2.71
249 250 6.362820 GGCGTTAACATTTCCGAAAAACAATA 59.637 34.615 6.39 0.00 0.00 1.90
250 251 7.409980 GGCGTTAACATTTCCGAAAAACAATAG 60.410 37.037 6.39 0.00 0.00 1.73
251 252 7.409980 GCGTTAACATTTCCGAAAAACAATAGG 60.410 37.037 6.39 0.00 0.00 2.57
252 253 7.409980 CGTTAACATTTCCGAAAAACAATAGGC 60.410 37.037 6.39 0.00 0.00 3.93
253 254 5.722021 ACATTTCCGAAAAACAATAGGCT 57.278 34.783 0.00 0.00 0.00 4.58
254 255 6.096673 ACATTTCCGAAAAACAATAGGCTT 57.903 33.333 0.00 0.00 0.00 4.35
255 256 5.925969 ACATTTCCGAAAAACAATAGGCTTG 59.074 36.000 0.00 0.00 0.00 4.01
265 266 4.320608 ACAATAGGCTTGTGTTTGTTGG 57.679 40.909 0.00 0.00 0.00 3.77
301 302 3.367288 TTTTTAAGGGGGCGGGAAG 57.633 52.632 0.00 0.00 0.00 3.46
302 303 0.778720 TTTTTAAGGGGGCGGGAAGA 59.221 50.000 0.00 0.00 0.00 2.87
303 304 0.778720 TTTTAAGGGGGCGGGAAGAA 59.221 50.000 0.00 0.00 0.00 2.52
307 308 0.830444 AAGGGGGCGGGAAGAAAAAC 60.830 55.000 0.00 0.00 0.00 2.43
324 325 0.252197 AACATAGTCGGTGGAAGCCC 59.748 55.000 0.00 0.00 0.00 5.19
330 331 1.002624 TCGGTGGAAGCCCATTGTC 60.003 57.895 0.00 0.00 45.68 3.18
397 398 2.730129 AAAGCCCGGCCCAAGTGAAT 62.730 55.000 5.55 0.00 0.00 2.57
404 405 1.084370 GGCCCAAGTGAATCGACTCG 61.084 60.000 0.00 0.00 0.00 4.18
948 1130 2.609459 GCTGATCTGGTTGGTGTAATCG 59.391 50.000 1.46 0.00 0.00 3.34
1134 1317 2.258726 GGGGTTCTTTCAGCGCGTT 61.259 57.895 8.43 0.00 0.00 4.84
1164 1347 1.209747 GATCCGTTAGCTTTGTCCCCT 59.790 52.381 0.00 0.00 0.00 4.79
1173 1356 0.323629 CTTTGTCCCCTTGCTCGGTA 59.676 55.000 0.00 0.00 0.00 4.02
1178 1361 1.743394 GTCCCCTTGCTCGGTATTTTG 59.257 52.381 0.00 0.00 0.00 2.44
1201 1384 2.238144 AGATCTAGTGGCATGTGCTTGT 59.762 45.455 4.84 0.00 41.70 3.16
1249 1463 7.327275 CGTAGAAGTGAACATATCTTCTATGGC 59.673 40.741 18.06 7.39 45.82 4.40
1284 1498 9.110502 GATTTCCTTTCGTAGTTGAAGGATTAT 57.889 33.333 5.03 3.01 30.55 1.28
1348 1580 6.803807 GCTCCATTAGTTTTGTGATGTTTCTC 59.196 38.462 0.00 0.00 0.00 2.87
1356 1588 3.198409 TGTGATGTTTCTCTGCAGTGT 57.802 42.857 14.67 0.00 0.00 3.55
1371 1603 2.292267 CAGTGTCTGTTCAGCTTGGTT 58.708 47.619 0.00 0.00 0.00 3.67
1436 1668 5.923204 ACATTCAGCCGATCTTCTCTTATT 58.077 37.500 0.00 0.00 0.00 1.40
1447 1679 2.396590 TCTCTTATTTGTCCGGTGCC 57.603 50.000 0.00 0.00 0.00 5.01
1456 1688 1.961277 GTCCGGTGCCTGTTCACTG 60.961 63.158 0.00 0.00 41.72 3.66
1513 1861 9.836179 AATGATATCTTCAGTAATCTACTCCCT 57.164 33.333 3.98 0.00 37.89 4.20
1514 1862 8.871629 TGATATCTTCAGTAATCTACTCCCTC 57.128 38.462 3.98 0.00 36.76 4.30
1515 1863 7.891183 TGATATCTTCAGTAATCTACTCCCTCC 59.109 40.741 3.98 0.00 36.76 4.30
1516 1864 4.462133 TCTTCAGTAATCTACTCCCTCCG 58.538 47.826 0.00 0.00 36.76 4.63
1517 1865 3.947612 TCAGTAATCTACTCCCTCCGT 57.052 47.619 0.00 0.00 36.76 4.69
1518 1866 4.246712 TCAGTAATCTACTCCCTCCGTT 57.753 45.455 0.00 0.00 36.76 4.44
1519 1867 4.205587 TCAGTAATCTACTCCCTCCGTTC 58.794 47.826 0.00 0.00 36.76 3.95
1520 1868 3.318557 CAGTAATCTACTCCCTCCGTTCC 59.681 52.174 0.00 0.00 36.76 3.62
1521 1869 2.850695 AATCTACTCCCTCCGTTCCT 57.149 50.000 0.00 0.00 0.00 3.36
1522 1870 3.967467 AATCTACTCCCTCCGTTCCTA 57.033 47.619 0.00 0.00 0.00 2.94
1523 1871 3.967467 ATCTACTCCCTCCGTTCCTAA 57.033 47.619 0.00 0.00 0.00 2.69
1524 1872 3.744940 TCTACTCCCTCCGTTCCTAAA 57.255 47.619 0.00 0.00 0.00 1.85
1525 1873 4.261411 TCTACTCCCTCCGTTCCTAAAT 57.739 45.455 0.00 0.00 0.00 1.40
1526 1874 5.393068 TCTACTCCCTCCGTTCCTAAATA 57.607 43.478 0.00 0.00 0.00 1.40
1527 1875 5.961897 TCTACTCCCTCCGTTCCTAAATAT 58.038 41.667 0.00 0.00 0.00 1.28
1528 1876 7.095183 TCTACTCCCTCCGTTCCTAAATATA 57.905 40.000 0.00 0.00 0.00 0.86
1529 1877 7.529555 TCTACTCCCTCCGTTCCTAAATATAA 58.470 38.462 0.00 0.00 0.00 0.98
1530 1878 6.667558 ACTCCCTCCGTTCCTAAATATAAG 57.332 41.667 0.00 0.00 0.00 1.73
1531 1879 6.141790 ACTCCCTCCGTTCCTAAATATAAGT 58.858 40.000 0.00 0.00 0.00 2.24
1532 1880 6.267242 ACTCCCTCCGTTCCTAAATATAAGTC 59.733 42.308 0.00 0.00 0.00 3.01
1533 1881 6.379579 TCCCTCCGTTCCTAAATATAAGTCT 58.620 40.000 0.00 0.00 0.00 3.24
1534 1882 6.842807 TCCCTCCGTTCCTAAATATAAGTCTT 59.157 38.462 0.00 0.00 0.00 3.01
1535 1883 7.346436 TCCCTCCGTTCCTAAATATAAGTCTTT 59.654 37.037 0.00 0.00 0.00 2.52
1536 1884 7.991460 CCCTCCGTTCCTAAATATAAGTCTTTT 59.009 37.037 0.00 0.00 0.00 2.27
1537 1885 9.392259 CCTCCGTTCCTAAATATAAGTCTTTTT 57.608 33.333 0.00 0.00 0.00 1.94
1566 1914 5.977489 TCCAATATGGACTACATACGGAG 57.023 43.478 0.00 0.00 42.67 4.63
1567 1915 5.637127 TCCAATATGGACTACATACGGAGA 58.363 41.667 0.00 0.00 42.67 3.71
1568 1916 6.072649 TCCAATATGGACTACATACGGAGAA 58.927 40.000 0.00 0.00 42.67 2.87
1569 1917 6.551975 TCCAATATGGACTACATACGGAGAAA 59.448 38.462 0.00 0.00 42.67 2.52
1570 1918 7.070198 TCCAATATGGACTACATACGGAGAAAA 59.930 37.037 0.00 0.00 42.67 2.29
1571 1919 7.713507 CCAATATGGACTACATACGGAGAAAAA 59.286 37.037 0.00 0.00 44.41 1.94
1572 1920 9.273016 CAATATGGACTACATACGGAGAAAAAT 57.727 33.333 0.00 0.00 44.41 1.82
1573 1921 8.833231 ATATGGACTACATACGGAGAAAAATG 57.167 34.615 0.00 0.00 44.41 2.32
1574 1922 6.288941 TGGACTACATACGGAGAAAAATGA 57.711 37.500 0.00 0.00 0.00 2.57
1575 1923 6.338146 TGGACTACATACGGAGAAAAATGAG 58.662 40.000 0.00 0.00 0.00 2.90
1576 1924 6.070995 TGGACTACATACGGAGAAAAATGAGT 60.071 38.462 0.00 0.00 0.00 3.41
1577 1925 6.255887 GGACTACATACGGAGAAAAATGAGTG 59.744 42.308 0.00 0.00 0.00 3.51
1578 1926 6.931838 ACTACATACGGAGAAAAATGAGTGA 58.068 36.000 0.00 0.00 0.00 3.41
1579 1927 7.383687 ACTACATACGGAGAAAAATGAGTGAA 58.616 34.615 0.00 0.00 0.00 3.18
1580 1928 8.041323 ACTACATACGGAGAAAAATGAGTGAAT 58.959 33.333 0.00 0.00 0.00 2.57
1581 1929 7.308782 ACATACGGAGAAAAATGAGTGAATC 57.691 36.000 0.00 0.00 0.00 2.52
1582 1930 7.106239 ACATACGGAGAAAAATGAGTGAATCT 58.894 34.615 0.00 0.00 0.00 2.40
1583 1931 8.258007 ACATACGGAGAAAAATGAGTGAATCTA 58.742 33.333 0.00 0.00 0.00 1.98
1584 1932 6.969828 ACGGAGAAAAATGAGTGAATCTAC 57.030 37.500 0.00 0.00 0.00 2.59
1585 1933 6.464222 ACGGAGAAAAATGAGTGAATCTACA 58.536 36.000 0.00 0.00 0.00 2.74
1586 1934 6.369065 ACGGAGAAAAATGAGTGAATCTACAC 59.631 38.462 0.00 0.00 40.60 2.90
1609 1957 8.662369 CACTCTAAAGTGCGTCTATATACATC 57.338 38.462 0.00 0.00 46.01 3.06
1610 1958 7.751348 CACTCTAAAGTGCGTCTATATACATCC 59.249 40.741 0.00 0.00 46.01 3.51
1611 1959 6.839033 TCTAAAGTGCGTCTATATACATCCG 58.161 40.000 0.00 0.00 0.00 4.18
1612 1960 5.449107 AAAGTGCGTCTATATACATCCGT 57.551 39.130 0.00 0.00 0.00 4.69
1613 1961 6.564709 AAAGTGCGTCTATATACATCCGTA 57.435 37.500 0.00 0.00 0.00 4.02
1614 1962 6.754702 AAGTGCGTCTATATACATCCGTAT 57.245 37.500 0.00 0.00 41.34 3.06
1615 1963 6.754702 AGTGCGTCTATATACATCCGTATT 57.245 37.500 0.00 0.00 39.17 1.89
1616 1964 6.552629 AGTGCGTCTATATACATCCGTATTG 58.447 40.000 0.00 0.00 39.17 1.90
1617 1965 6.373495 AGTGCGTCTATATACATCCGTATTGA 59.627 38.462 0.00 0.00 39.17 2.57
1618 1966 7.025365 GTGCGTCTATATACATCCGTATTGAA 58.975 38.462 0.00 0.00 39.17 2.69
1619 1967 7.539710 GTGCGTCTATATACATCCGTATTGAAA 59.460 37.037 0.00 0.00 39.17 2.69
1620 1968 8.248253 TGCGTCTATATACATCCGTATTGAAAT 58.752 33.333 0.00 0.00 39.17 2.17
1621 1969 8.744011 GCGTCTATATACATCCGTATTGAAATC 58.256 37.037 0.00 0.00 39.17 2.17
1622 1970 9.783256 CGTCTATATACATCCGTATTGAAATCA 57.217 33.333 0.00 0.00 39.17 2.57
1630 1978 7.985476 ACATCCGTATTGAAATCACTAAAAGG 58.015 34.615 0.00 0.00 0.00 3.11
1631 1979 7.827236 ACATCCGTATTGAAATCACTAAAAGGA 59.173 33.333 0.00 0.00 0.00 3.36
1632 1980 7.605410 TCCGTATTGAAATCACTAAAAGGAC 57.395 36.000 0.00 0.00 0.00 3.85
1633 1981 7.391620 TCCGTATTGAAATCACTAAAAGGACT 58.608 34.615 0.00 0.00 0.00 3.85
1634 1982 7.881232 TCCGTATTGAAATCACTAAAAGGACTT 59.119 33.333 0.00 0.00 0.00 3.01
1635 1983 9.158233 CCGTATTGAAATCACTAAAAGGACTTA 57.842 33.333 0.00 0.00 0.00 2.24
1646 1994 8.636213 TCACTAAAAGGACTTATATAGGAACGG 58.364 37.037 0.00 0.00 0.00 4.44
1647 1995 8.636213 CACTAAAAGGACTTATATAGGAACGGA 58.364 37.037 0.00 0.00 0.00 4.69
1648 1996 8.858094 ACTAAAAGGACTTATATAGGAACGGAG 58.142 37.037 0.00 0.00 0.00 4.63
1649 1997 6.667558 AAAGGACTTATATAGGAACGGAGG 57.332 41.667 0.00 0.00 0.00 4.30
1650 1998 4.675038 AGGACTTATATAGGAACGGAGGG 58.325 47.826 0.00 0.00 0.00 4.30
1651 1999 4.356190 AGGACTTATATAGGAACGGAGGGA 59.644 45.833 0.00 0.00 0.00 4.20
1652 2000 4.705991 GGACTTATATAGGAACGGAGGGAG 59.294 50.000 0.00 0.00 0.00 4.30
1653 2001 4.087907 ACTTATATAGGAACGGAGGGAGC 58.912 47.826 0.00 0.00 0.00 4.70
1654 2002 2.696526 ATATAGGAACGGAGGGAGCA 57.303 50.000 0.00 0.00 0.00 4.26
1695 2043 7.984859 ATATAGTGATGGCATCTCCTTATGA 57.015 36.000 26.49 9.11 35.26 2.15
1696 2044 6.887886 ATAGTGATGGCATCTCCTTATGAT 57.112 37.500 26.49 10.73 35.26 2.45
1703 2051 6.550938 TGGCATCTCCTTATGATATAGTGG 57.449 41.667 0.00 0.00 35.26 4.00
1724 2075 6.818644 AGTGGAGTAATGTACATTAGTTGCTG 59.181 38.462 28.39 0.00 37.14 4.41
1748 2102 4.534168 GAATGAGAATGCATTCGGATGTG 58.466 43.478 28.88 0.00 43.09 3.21
1759 2113 1.485124 TCGGATGTGCCTCTGTATGT 58.515 50.000 0.00 0.00 0.00 2.29
1766 2120 0.042581 TGCCTCTGTATGTCCCCTCA 59.957 55.000 0.00 0.00 0.00 3.86
1770 2124 2.571653 CCTCTGTATGTCCCCTCACAAA 59.428 50.000 0.00 0.00 0.00 2.83
1774 2128 4.104102 TCTGTATGTCCCCTCACAAACTTT 59.896 41.667 0.00 0.00 0.00 2.66
1778 2132 3.551846 TGTCCCCTCACAAACTTTCTTC 58.448 45.455 0.00 0.00 0.00 2.87
1779 2133 3.202151 TGTCCCCTCACAAACTTTCTTCT 59.798 43.478 0.00 0.00 0.00 2.85
1780 2134 4.207955 GTCCCCTCACAAACTTTCTTCTT 58.792 43.478 0.00 0.00 0.00 2.52
1796 2150 3.265221 TCTTCTTGTTGCTCCCTGATGAT 59.735 43.478 0.00 0.00 0.00 2.45
1828 2182 7.540474 ACTATCAAACCTAGAAGAGAACACA 57.460 36.000 0.00 0.00 0.00 3.72
1829 2183 7.379750 ACTATCAAACCTAGAAGAGAACACAC 58.620 38.462 0.00 0.00 0.00 3.82
1846 2519 1.134946 ACACTTGCTGAAAGGTGCAAC 59.865 47.619 0.00 0.00 43.17 4.17
1849 2522 2.159198 ACTTGCTGAAAGGTGCAACAAG 60.159 45.455 3.64 0.00 43.17 3.16
1866 2539 5.861787 GCAACAAGCAATATAAGGACGTTTT 59.138 36.000 0.00 0.00 44.79 2.43
1892 2565 7.945033 TGAAATTTAATTGCAACTGGAGAAC 57.055 32.000 0.00 0.00 0.00 3.01
1914 2587 9.936759 AGAACCATTTGTTTTGTTTTAAGAAGA 57.063 25.926 0.00 0.00 37.29 2.87
1924 2597 9.647679 GTTTTGTTTTAAGAAGAGTACTGTAGC 57.352 33.333 0.00 0.00 0.00 3.58
2065 2739 8.506168 TTCCATAAGTTTCCACTGCTTATTAG 57.494 34.615 0.00 0.00 34.36 1.73
2141 2815 1.172812 AGAAACTCGGTTTGCCCAGC 61.173 55.000 6.73 0.00 35.77 4.85
2147 2821 0.891904 TCGGTTTGCCCAGCTTTACC 60.892 55.000 0.00 0.00 0.00 2.85
2161 2835 5.431765 CAGCTTTACCCTTCAGTCATGTAT 58.568 41.667 0.00 0.00 0.00 2.29
2165 2839 8.275040 AGCTTTACCCTTCAGTCATGTATAATT 58.725 33.333 0.00 0.00 0.00 1.40
2166 2840 8.903820 GCTTTACCCTTCAGTCATGTATAATTT 58.096 33.333 0.00 0.00 0.00 1.82
2168 2842 8.746052 TTACCCTTCAGTCATGTATAATTTGG 57.254 34.615 0.00 0.00 0.00 3.28
2169 2843 6.129179 ACCCTTCAGTCATGTATAATTTGGG 58.871 40.000 0.00 0.00 34.89 4.12
2170 2844 6.069088 ACCCTTCAGTCATGTATAATTTGGGA 60.069 38.462 0.00 0.00 33.18 4.37
2171 2845 6.833416 CCCTTCAGTCATGTATAATTTGGGAA 59.167 38.462 0.00 0.00 0.00 3.97
2172 2846 7.341769 CCCTTCAGTCATGTATAATTTGGGAAA 59.658 37.037 0.00 0.00 0.00 3.13
2173 2847 8.917088 CCTTCAGTCATGTATAATTTGGGAAAT 58.083 33.333 0.00 0.00 0.00 2.17
2174 2848 9.956720 CTTCAGTCATGTATAATTTGGGAAATC 57.043 33.333 0.00 0.00 0.00 2.17
2175 2849 9.473007 TTCAGTCATGTATAATTTGGGAAATCA 57.527 29.630 0.00 0.00 0.00 2.57
2176 2850 9.645128 TCAGTCATGTATAATTTGGGAAATCAT 57.355 29.630 0.00 0.00 0.00 2.45
2177 2851 9.903682 CAGTCATGTATAATTTGGGAAATCATC 57.096 33.333 0.00 0.00 0.00 2.92
2178 2852 9.645128 AGTCATGTATAATTTGGGAAATCATCA 57.355 29.630 0.00 0.00 0.00 3.07
2187 2861 5.874897 TTGGGAAATCATCATTTGGATCC 57.125 39.130 4.20 4.20 31.94 3.36
2188 2862 5.146868 TGGGAAATCATCATTTGGATCCT 57.853 39.130 14.23 0.00 31.94 3.24
2189 2863 4.897076 TGGGAAATCATCATTTGGATCCTG 59.103 41.667 14.23 2.92 31.94 3.86
2190 2864 4.897670 GGGAAATCATCATTTGGATCCTGT 59.102 41.667 14.23 0.00 31.94 4.00
2191 2865 5.010415 GGGAAATCATCATTTGGATCCTGTC 59.990 44.000 14.23 0.00 31.94 3.51
2192 2866 5.832060 GGAAATCATCATTTGGATCCTGTCT 59.168 40.000 14.23 0.00 31.94 3.41
2193 2867 6.238953 GGAAATCATCATTTGGATCCTGTCTG 60.239 42.308 14.23 5.64 31.94 3.51
2194 2868 4.160642 TCATCATTTGGATCCTGTCTGG 57.839 45.455 14.23 0.00 32.57 3.86
2195 2869 2.425143 TCATTTGGATCCTGTCTGGC 57.575 50.000 14.23 0.00 35.26 4.85
2196 2870 1.918262 TCATTTGGATCCTGTCTGGCT 59.082 47.619 14.23 0.00 35.26 4.75
2197 2871 2.092753 TCATTTGGATCCTGTCTGGCTC 60.093 50.000 14.23 0.00 35.26 4.70
2198 2872 1.661463 TTTGGATCCTGTCTGGCTCT 58.339 50.000 14.23 0.00 31.89 4.09
2199 2873 1.661463 TTGGATCCTGTCTGGCTCTT 58.339 50.000 14.23 0.00 31.89 2.85
2200 2874 1.198713 TGGATCCTGTCTGGCTCTTC 58.801 55.000 14.23 0.00 31.89 2.87
2201 2875 1.198713 GGATCCTGTCTGGCTCTTCA 58.801 55.000 3.84 0.00 31.89 3.02
2202 2876 1.138661 GGATCCTGTCTGGCTCTTCAG 59.861 57.143 3.84 0.00 31.89 3.02
2203 2877 1.830477 GATCCTGTCTGGCTCTTCAGT 59.170 52.381 0.00 0.00 36.25 3.41
2204 2878 1.722034 TCCTGTCTGGCTCTTCAGTT 58.278 50.000 0.00 0.00 36.25 3.16
2205 2879 2.050144 TCCTGTCTGGCTCTTCAGTTT 58.950 47.619 0.00 0.00 36.25 2.66
2206 2880 3.239449 TCCTGTCTGGCTCTTCAGTTTA 58.761 45.455 0.00 0.00 36.25 2.01
2207 2881 3.259374 TCCTGTCTGGCTCTTCAGTTTAG 59.741 47.826 0.00 0.00 36.25 1.85
2208 2882 3.259374 CCTGTCTGGCTCTTCAGTTTAGA 59.741 47.826 0.00 0.00 36.25 2.10
2209 2883 4.262635 CCTGTCTGGCTCTTCAGTTTAGAA 60.263 45.833 0.00 0.00 36.25 2.10
2210 2884 5.290493 TGTCTGGCTCTTCAGTTTAGAAA 57.710 39.130 0.00 0.00 36.25 2.52
2211 2885 5.057149 TGTCTGGCTCTTCAGTTTAGAAAC 58.943 41.667 0.00 0.00 39.17 2.78
2213 2887 5.760743 GTCTGGCTCTTCAGTTTAGAAACTT 59.239 40.000 4.90 0.00 46.52 2.66
2214 2888 5.760253 TCTGGCTCTTCAGTTTAGAAACTTG 59.240 40.000 4.90 2.46 46.52 3.16
2215 2889 4.821805 TGGCTCTTCAGTTTAGAAACTTGG 59.178 41.667 4.90 0.00 46.52 3.61
2216 2890 4.822350 GGCTCTTCAGTTTAGAAACTTGGT 59.178 41.667 4.90 0.00 46.52 3.67
2217 2891 5.299531 GGCTCTTCAGTTTAGAAACTTGGTT 59.700 40.000 4.90 0.00 46.52 3.67
2218 2892 6.183360 GGCTCTTCAGTTTAGAAACTTGGTTT 60.183 38.462 4.90 0.00 46.52 3.27
2219 2893 6.693113 GCTCTTCAGTTTAGAAACTTGGTTTG 59.307 38.462 4.90 0.00 46.52 2.93
2220 2894 6.560711 TCTTCAGTTTAGAAACTTGGTTTGC 58.439 36.000 4.90 0.00 46.52 3.68
2221 2895 5.257082 TCAGTTTAGAAACTTGGTTTGCC 57.743 39.130 4.90 0.00 46.52 4.52
2222 2896 4.098807 TCAGTTTAGAAACTTGGTTTGCCC 59.901 41.667 4.90 0.00 46.52 5.36
2223 2897 4.027437 AGTTTAGAAACTTGGTTTGCCCA 58.973 39.130 1.72 0.00 46.52 5.36
2224 2898 4.653801 AGTTTAGAAACTTGGTTTGCCCAT 59.346 37.500 1.72 0.00 46.52 4.00
2225 2899 5.130311 AGTTTAGAAACTTGGTTTGCCCATT 59.870 36.000 1.72 0.00 46.52 3.16
2226 2900 5.622346 TTAGAAACTTGGTTTGCCCATTT 57.378 34.783 0.17 0.00 44.74 2.32
2227 2901 4.502105 AGAAACTTGGTTTGCCCATTTT 57.498 36.364 0.17 0.00 44.74 1.82
2228 2902 4.450976 AGAAACTTGGTTTGCCCATTTTC 58.549 39.130 0.17 0.00 44.74 2.29
2229 2903 4.164030 AGAAACTTGGTTTGCCCATTTTCT 59.836 37.500 10.48 10.48 44.02 2.52
2230 2904 5.365314 AGAAACTTGGTTTGCCCATTTTCTA 59.635 36.000 13.03 0.00 45.43 2.10
2231 2905 5.622346 AACTTGGTTTGCCCATTTTCTAA 57.378 34.783 0.00 0.00 44.74 2.10
2232 2906 4.956085 ACTTGGTTTGCCCATTTTCTAAC 58.044 39.130 0.00 0.00 44.74 2.34
2247 2921 5.560966 TTTCTAACTCGGGAAATCATTGC 57.439 39.130 0.00 0.00 0.00 3.56
2249 2923 4.191544 TCTAACTCGGGAAATCATTGCTG 58.808 43.478 0.00 0.00 34.77 4.41
2260 2934 1.133181 TCATTGCTGGGACCCTGTCA 61.133 55.000 17.97 13.31 33.68 3.58
2280 2955 1.683385 AGGCTCTTCAGTTTTGCAACC 59.317 47.619 0.00 0.00 32.70 3.77
2283 2958 1.001378 CTCTTCAGTTTTGCAACCCCG 60.001 52.381 0.00 0.00 32.70 5.73
2287 2962 2.432444 TCAGTTTTGCAACCCCGATAG 58.568 47.619 0.00 0.00 32.70 2.08
2295 2970 1.095228 CAACCCCGATAGCATTGCGT 61.095 55.000 2.38 0.00 0.00 5.24
2457 3137 4.323792 CCTGTAACCCTTGATCACATCAGT 60.324 45.833 0.00 0.00 40.94 3.41
2664 3347 3.925090 CCTATGGGTCGGGGTCGC 61.925 72.222 0.00 0.00 36.13 5.19
3067 3751 1.809939 TTAAACTGGGCTGGGGGCAT 61.810 55.000 0.00 0.00 44.01 4.40
3086 3770 4.211389 GCATTGGTATTTCAGATTACGCG 58.789 43.478 3.53 3.53 0.00 6.01
3113 3797 6.768861 TGACATATTCATCTGAATCATGCACA 59.231 34.615 8.63 11.00 43.17 4.57
3117 3801 4.893424 TCATCTGAATCATGCACATGTG 57.107 40.909 21.83 21.83 39.72 3.21
3118 3802 4.519213 TCATCTGAATCATGCACATGTGA 58.481 39.130 29.80 14.54 39.72 3.58
3122 3806 4.703093 TCTGAATCATGCACATGTGAACAT 59.297 37.500 29.80 19.79 39.72 2.71
3137 3821 5.069318 TGTGAACATTTCTTGCCTGTATGA 58.931 37.500 0.00 0.00 0.00 2.15
3158 3842 3.198409 TGCGATGTTAGGCTTGATCAT 57.802 42.857 0.00 0.00 0.00 2.45
3200 3884 0.036306 CCGGTGTGGTTTAGCTTCCT 59.964 55.000 0.00 0.00 0.00 3.36
3201 3885 1.276989 CCGGTGTGGTTTAGCTTCCTA 59.723 52.381 0.00 0.00 0.00 2.94
3202 3886 2.618053 CGGTGTGGTTTAGCTTCCTAG 58.382 52.381 0.00 0.00 0.00 3.02
3300 3984 3.386768 TGGTTCCACTTCTCTCTTTCG 57.613 47.619 0.00 0.00 0.00 3.46
3446 4140 3.092334 AGTTTTTGGAATGTGTTCGCC 57.908 42.857 0.00 0.00 35.10 5.54
3511 4216 1.012086 CCACAGCGGAATCAGACATG 58.988 55.000 0.00 0.00 36.56 3.21
3620 4343 1.969923 CCCATGGTGGTGTCATGTTTT 59.030 47.619 11.73 0.00 40.07 2.43
3650 4373 2.439156 GCCGGAGCATTTGCCTCT 60.439 61.111 5.05 0.00 43.38 3.69
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
5 6 8.924691 CCATGTTGATATGTTTTGACGAATTTT 58.075 29.630 0.00 0.00 0.00 1.82
6 7 7.545265 CCCATGTTGATATGTTTTGACGAATTT 59.455 33.333 0.00 0.00 0.00 1.82
7 8 7.035004 CCCATGTTGATATGTTTTGACGAATT 58.965 34.615 0.00 0.00 0.00 2.17
8 9 6.405731 CCCCATGTTGATATGTTTTGACGAAT 60.406 38.462 0.00 0.00 0.00 3.34
9 10 5.105957 CCCCATGTTGATATGTTTTGACGAA 60.106 40.000 0.00 0.00 0.00 3.85
10 11 4.397730 CCCCATGTTGATATGTTTTGACGA 59.602 41.667 0.00 0.00 0.00 4.20
11 12 4.671377 CCCCATGTTGATATGTTTTGACG 58.329 43.478 0.00 0.00 0.00 4.35
12 13 4.432712 GCCCCATGTTGATATGTTTTGAC 58.567 43.478 0.00 0.00 0.00 3.18
13 14 3.450457 GGCCCCATGTTGATATGTTTTGA 59.550 43.478 0.00 0.00 0.00 2.69
14 15 3.451902 AGGCCCCATGTTGATATGTTTTG 59.548 43.478 0.00 0.00 0.00 2.44
15 16 3.723325 AGGCCCCATGTTGATATGTTTT 58.277 40.909 0.00 0.00 0.00 2.43
16 17 3.403228 AGGCCCCATGTTGATATGTTT 57.597 42.857 0.00 0.00 0.00 2.83
17 18 4.534647 TTAGGCCCCATGTTGATATGTT 57.465 40.909 0.00 0.00 0.00 2.71
18 19 4.747265 ATTAGGCCCCATGTTGATATGT 57.253 40.909 0.00 0.00 0.00 2.29
19 20 6.041865 TCAAAATTAGGCCCCATGTTGATATG 59.958 38.462 11.77 0.00 0.00 1.78
20 21 6.142498 TCAAAATTAGGCCCCATGTTGATAT 58.858 36.000 11.77 0.00 0.00 1.63
21 22 5.523588 TCAAAATTAGGCCCCATGTTGATA 58.476 37.500 11.77 0.00 0.00 2.15
22 23 4.360889 TCAAAATTAGGCCCCATGTTGAT 58.639 39.130 11.77 0.00 0.00 2.57
23 24 3.784178 TCAAAATTAGGCCCCATGTTGA 58.216 40.909 11.77 11.77 0.00 3.18
24 25 4.222588 TCTTCAAAATTAGGCCCCATGTTG 59.777 41.667 0.00 3.50 0.00 3.33
25 26 4.424842 TCTTCAAAATTAGGCCCCATGTT 58.575 39.130 0.00 0.00 0.00 2.71
26 27 4.059773 TCTTCAAAATTAGGCCCCATGT 57.940 40.909 0.00 0.00 0.00 3.21
27 28 4.897670 AGATCTTCAAAATTAGGCCCCATG 59.102 41.667 0.00 0.00 0.00 3.66
28 29 5.143369 GAGATCTTCAAAATTAGGCCCCAT 58.857 41.667 0.00 0.00 0.00 4.00
29 30 4.536765 GAGATCTTCAAAATTAGGCCCCA 58.463 43.478 0.00 0.00 0.00 4.96
30 31 3.565902 CGAGATCTTCAAAATTAGGCCCC 59.434 47.826 0.00 0.00 0.00 5.80
31 32 4.200092 ACGAGATCTTCAAAATTAGGCCC 58.800 43.478 0.00 0.00 0.00 5.80
32 33 4.025647 CGACGAGATCTTCAAAATTAGGCC 60.026 45.833 0.00 0.00 0.00 5.19
33 34 4.804139 TCGACGAGATCTTCAAAATTAGGC 59.196 41.667 0.00 0.00 0.00 3.93
34 35 6.197468 GTCTCGACGAGATCTTCAAAATTAGG 59.803 42.308 28.81 0.00 40.98 2.69
35 36 7.144007 GTCTCGACGAGATCTTCAAAATTAG 57.856 40.000 28.81 0.00 40.98 1.73
52 53 3.777478 TCACCATTAAATCCGTCTCGAC 58.223 45.455 0.00 0.00 0.00 4.20
53 54 4.459390 TTCACCATTAAATCCGTCTCGA 57.541 40.909 0.00 0.00 0.00 4.04
54 55 4.494199 GCTTTCACCATTAAATCCGTCTCG 60.494 45.833 0.00 0.00 0.00 4.04
55 56 4.494199 CGCTTTCACCATTAAATCCGTCTC 60.494 45.833 0.00 0.00 0.00 3.36
56 57 3.374058 CGCTTTCACCATTAAATCCGTCT 59.626 43.478 0.00 0.00 0.00 4.18
57 58 3.486875 CCGCTTTCACCATTAAATCCGTC 60.487 47.826 0.00 0.00 0.00 4.79
58 59 2.422127 CCGCTTTCACCATTAAATCCGT 59.578 45.455 0.00 0.00 0.00 4.69
59 60 2.680841 TCCGCTTTCACCATTAAATCCG 59.319 45.455 0.00 0.00 0.00 4.18
60 61 4.918810 ATCCGCTTTCACCATTAAATCC 57.081 40.909 0.00 0.00 0.00 3.01
61 62 6.136541 AGAATCCGCTTTCACCATTAAATC 57.863 37.500 0.00 0.00 0.00 2.17
62 63 6.530019 AAGAATCCGCTTTCACCATTAAAT 57.470 33.333 0.00 0.00 0.00 1.40
63 64 5.975693 AAGAATCCGCTTTCACCATTAAA 57.024 34.783 0.00 0.00 0.00 1.52
64 65 6.177610 ACTAAGAATCCGCTTTCACCATTAA 58.822 36.000 0.00 0.00 0.00 1.40
65 66 5.741011 ACTAAGAATCCGCTTTCACCATTA 58.259 37.500 0.00 0.00 0.00 1.90
66 67 4.589908 ACTAAGAATCCGCTTTCACCATT 58.410 39.130 0.00 0.00 0.00 3.16
67 68 4.222124 ACTAAGAATCCGCTTTCACCAT 57.778 40.909 0.00 0.00 0.00 3.55
68 69 3.695830 ACTAAGAATCCGCTTTCACCA 57.304 42.857 0.00 0.00 0.00 4.17
69 70 4.000988 TGAACTAAGAATCCGCTTTCACC 58.999 43.478 0.00 0.00 0.00 4.02
70 71 4.691216 AGTGAACTAAGAATCCGCTTTCAC 59.309 41.667 0.00 0.00 35.17 3.18
71 72 4.894784 AGTGAACTAAGAATCCGCTTTCA 58.105 39.130 0.00 0.00 0.00 2.69
72 73 5.864628 AAGTGAACTAAGAATCCGCTTTC 57.135 39.130 0.00 0.00 0.00 2.62
73 74 6.635030 AAAAGTGAACTAAGAATCCGCTTT 57.365 33.333 0.00 0.00 0.00 3.51
74 75 6.635030 AAAAAGTGAACTAAGAATCCGCTT 57.365 33.333 0.00 0.00 0.00 4.68
100 101 9.303116 TGGCTTAAAAATGTTGTATCTCCTAAA 57.697 29.630 0.00 0.00 0.00 1.85
101 102 8.871629 TGGCTTAAAAATGTTGTATCTCCTAA 57.128 30.769 0.00 0.00 0.00 2.69
102 103 8.871629 TTGGCTTAAAAATGTTGTATCTCCTA 57.128 30.769 0.00 0.00 0.00 2.94
103 104 7.775053 TTGGCTTAAAAATGTTGTATCTCCT 57.225 32.000 0.00 0.00 0.00 3.69
104 105 8.825667 TTTTGGCTTAAAAATGTTGTATCTCC 57.174 30.769 0.00 0.00 35.41 3.71
106 107 9.051679 GGTTTTTGGCTTAAAAATGTTGTATCT 57.948 29.630 12.79 0.00 46.56 1.98
107 108 8.831550 TGGTTTTTGGCTTAAAAATGTTGTATC 58.168 29.630 12.79 1.95 46.56 2.24
108 109 8.738645 TGGTTTTTGGCTTAAAAATGTTGTAT 57.261 26.923 12.79 0.00 46.56 2.29
109 110 8.561738 TTGGTTTTTGGCTTAAAAATGTTGTA 57.438 26.923 12.79 0.00 46.56 2.41
110 111 7.454260 TTGGTTTTTGGCTTAAAAATGTTGT 57.546 28.000 12.79 0.00 46.56 3.32
111 112 8.748380 TTTTGGTTTTTGGCTTAAAAATGTTG 57.252 26.923 12.79 0.00 46.56 3.33
136 137 8.963725 TGAATAGATGACATCAGCAGAATTTTT 58.036 29.630 17.57 0.00 34.14 1.94
137 138 8.515695 TGAATAGATGACATCAGCAGAATTTT 57.484 30.769 17.57 0.00 34.14 1.82
138 139 8.693120 ATGAATAGATGACATCAGCAGAATTT 57.307 30.769 17.57 0.00 34.14 1.82
139 140 9.217278 GTATGAATAGATGACATCAGCAGAATT 57.783 33.333 17.57 6.94 34.14 2.17
140 141 7.544915 CGTATGAATAGATGACATCAGCAGAAT 59.455 37.037 17.57 6.51 34.14 2.40
141 142 6.865205 CGTATGAATAGATGACATCAGCAGAA 59.135 38.462 17.57 0.00 34.14 3.02
142 143 6.015940 ACGTATGAATAGATGACATCAGCAGA 60.016 38.462 17.57 4.54 34.14 4.26
143 144 6.155136 ACGTATGAATAGATGACATCAGCAG 58.845 40.000 17.57 2.12 34.14 4.24
144 145 6.089249 ACGTATGAATAGATGACATCAGCA 57.911 37.500 17.57 9.50 34.14 4.41
145 146 6.617317 GCAACGTATGAATAGATGACATCAGC 60.617 42.308 17.57 4.42 0.00 4.26
146 147 6.421801 TGCAACGTATGAATAGATGACATCAG 59.578 38.462 17.57 0.66 0.00 2.90
147 148 6.279882 TGCAACGTATGAATAGATGACATCA 58.720 36.000 17.57 4.35 0.00 3.07
148 149 6.769608 TGCAACGTATGAATAGATGACATC 57.230 37.500 7.39 7.39 0.00 3.06
149 150 7.552458 TTTGCAACGTATGAATAGATGACAT 57.448 32.000 0.00 0.00 0.00 3.06
150 151 6.976636 TTTGCAACGTATGAATAGATGACA 57.023 33.333 0.00 0.00 0.00 3.58
151 152 8.122330 TCATTTTGCAACGTATGAATAGATGAC 58.878 33.333 13.01 0.00 0.00 3.06
152 153 8.207521 TCATTTTGCAACGTATGAATAGATGA 57.792 30.769 13.01 0.00 0.00 2.92
153 154 8.124823 ACTCATTTTGCAACGTATGAATAGATG 58.875 33.333 15.13 8.14 0.00 2.90
154 155 8.124823 CACTCATTTTGCAACGTATGAATAGAT 58.875 33.333 15.13 2.23 0.00 1.98
155 156 7.333174 TCACTCATTTTGCAACGTATGAATAGA 59.667 33.333 15.13 11.47 0.00 1.98
156 157 7.463544 TCACTCATTTTGCAACGTATGAATAG 58.536 34.615 15.13 9.11 0.00 1.73
157 158 7.371126 TCACTCATTTTGCAACGTATGAATA 57.629 32.000 15.13 5.39 0.00 1.75
158 159 6.252967 TCACTCATTTTGCAACGTATGAAT 57.747 33.333 15.13 6.55 0.00 2.57
159 160 5.681337 TCACTCATTTTGCAACGTATGAA 57.319 34.783 15.13 1.46 0.00 2.57
160 161 5.411053 TCATCACTCATTTTGCAACGTATGA 59.589 36.000 0.00 8.16 0.00 2.15
161 162 5.630061 TCATCACTCATTTTGCAACGTATG 58.370 37.500 0.00 3.82 0.00 2.39
162 163 5.878332 TCATCACTCATTTTGCAACGTAT 57.122 34.783 0.00 0.00 0.00 3.06
163 164 5.878332 ATCATCACTCATTTTGCAACGTA 57.122 34.783 0.00 0.00 0.00 3.57
164 165 4.771590 ATCATCACTCATTTTGCAACGT 57.228 36.364 0.00 0.00 0.00 3.99
165 166 6.110543 TCTATCATCACTCATTTTGCAACG 57.889 37.500 0.00 0.00 0.00 4.10
166 167 6.493116 CCTCTATCATCACTCATTTTGCAAC 58.507 40.000 0.00 0.00 0.00 4.17
167 168 5.066893 GCCTCTATCATCACTCATTTTGCAA 59.933 40.000 0.00 0.00 0.00 4.08
168 169 4.577693 GCCTCTATCATCACTCATTTTGCA 59.422 41.667 0.00 0.00 0.00 4.08
169 170 4.319333 CGCCTCTATCATCACTCATTTTGC 60.319 45.833 0.00 0.00 0.00 3.68
170 171 4.813161 ACGCCTCTATCATCACTCATTTTG 59.187 41.667 0.00 0.00 0.00 2.44
171 172 4.813161 CACGCCTCTATCATCACTCATTTT 59.187 41.667 0.00 0.00 0.00 1.82
172 173 4.141846 ACACGCCTCTATCATCACTCATTT 60.142 41.667 0.00 0.00 0.00 2.32
173 174 3.386078 ACACGCCTCTATCATCACTCATT 59.614 43.478 0.00 0.00 0.00 2.57
174 175 2.961741 ACACGCCTCTATCATCACTCAT 59.038 45.455 0.00 0.00 0.00 2.90
175 176 2.099756 CACACGCCTCTATCATCACTCA 59.900 50.000 0.00 0.00 0.00 3.41
176 177 2.544694 CCACACGCCTCTATCATCACTC 60.545 54.545 0.00 0.00 0.00 3.51
177 178 1.410517 CCACACGCCTCTATCATCACT 59.589 52.381 0.00 0.00 0.00 3.41
178 179 1.539065 CCCACACGCCTCTATCATCAC 60.539 57.143 0.00 0.00 0.00 3.06
179 180 0.752658 CCCACACGCCTCTATCATCA 59.247 55.000 0.00 0.00 0.00 3.07
180 181 0.601311 GCCCACACGCCTCTATCATC 60.601 60.000 0.00 0.00 0.00 2.92
181 182 1.447643 GCCCACACGCCTCTATCAT 59.552 57.895 0.00 0.00 0.00 2.45
182 183 2.900273 GCCCACACGCCTCTATCA 59.100 61.111 0.00 0.00 0.00 2.15
183 184 2.088674 ATCGCCCACACGCCTCTATC 62.089 60.000 0.00 0.00 0.00 2.08
184 185 2.134287 ATCGCCCACACGCCTCTAT 61.134 57.895 0.00 0.00 0.00 1.98
185 186 2.758327 ATCGCCCACACGCCTCTA 60.758 61.111 0.00 0.00 0.00 2.43
186 187 4.457496 CATCGCCCACACGCCTCT 62.457 66.667 0.00 0.00 0.00 3.69
187 188 3.365291 TACATCGCCCACACGCCTC 62.365 63.158 0.00 0.00 0.00 4.70
188 189 3.387091 TACATCGCCCACACGCCT 61.387 61.111 0.00 0.00 0.00 5.52
189 190 3.192922 GTACATCGCCCACACGCC 61.193 66.667 0.00 0.00 0.00 5.68
190 191 1.570347 TTTGTACATCGCCCACACGC 61.570 55.000 0.00 0.00 0.00 5.34
191 192 0.165079 GTTTGTACATCGCCCACACG 59.835 55.000 0.00 0.00 0.00 4.49
192 193 1.069500 GTGTTTGTACATCGCCCACAC 60.069 52.381 0.00 0.27 36.50 3.82
193 194 1.231221 GTGTTTGTACATCGCCCACA 58.769 50.000 0.00 0.00 36.50 4.17
194 195 0.519961 GGTGTTTGTACATCGCCCAC 59.480 55.000 15.80 9.75 36.50 4.61
195 196 2.935505 GGTGTTTGTACATCGCCCA 58.064 52.632 15.80 0.00 36.50 5.36
196 197 2.177044 GGGTGTTTGTACATCGCCC 58.823 57.895 24.48 24.48 43.22 6.13
197 198 0.519961 GTGGGTGTTTGTACATCGCC 59.480 55.000 17.46 17.46 36.18 5.54
198 199 1.069500 GTGTGGGTGTTTGTACATCGC 60.069 52.381 0.00 0.00 36.18 4.58
199 200 1.193650 CGTGTGGGTGTTTGTACATCG 59.806 52.381 0.00 0.00 36.18 3.84
200 201 2.032377 CACGTGTGGGTGTTTGTACATC 60.032 50.000 7.58 0.00 36.50 3.06
201 202 1.944024 CACGTGTGGGTGTTTGTACAT 59.056 47.619 7.58 0.00 36.50 2.29
202 203 1.370609 CACGTGTGGGTGTTTGTACA 58.629 50.000 7.58 0.00 33.24 2.90
218 219 1.400500 GGAAATGTTAACGCCCACACG 60.400 52.381 0.26 0.00 39.50 4.49
219 220 1.400500 CGGAAATGTTAACGCCCACAC 60.400 52.381 0.26 0.00 0.00 3.82
220 221 0.875728 CGGAAATGTTAACGCCCACA 59.124 50.000 0.26 0.00 0.00 4.17
221 222 1.158434 TCGGAAATGTTAACGCCCAC 58.842 50.000 0.26 0.00 0.00 4.61
222 223 1.893544 TTCGGAAATGTTAACGCCCA 58.106 45.000 0.26 0.00 0.00 5.36
223 224 2.993449 TTTCGGAAATGTTAACGCCC 57.007 45.000 0.00 0.00 0.00 6.13
224 225 4.043073 TGTTTTTCGGAAATGTTAACGCC 58.957 39.130 3.67 0.00 0.00 5.68
225 226 5.623174 TTGTTTTTCGGAAATGTTAACGC 57.377 34.783 3.67 0.00 0.00 4.84
226 227 7.409980 GCCTATTGTTTTTCGGAAATGTTAACG 60.410 37.037 3.67 0.00 0.00 3.18
227 228 7.597369 AGCCTATTGTTTTTCGGAAATGTTAAC 59.403 33.333 3.67 6.43 0.00 2.01
228 229 7.662897 AGCCTATTGTTTTTCGGAAATGTTAA 58.337 30.769 3.67 0.00 0.00 2.01
229 230 7.222000 AGCCTATTGTTTTTCGGAAATGTTA 57.778 32.000 3.67 0.00 0.00 2.41
230 231 6.096673 AGCCTATTGTTTTTCGGAAATGTT 57.903 33.333 3.67 0.00 0.00 2.71
231 232 5.722021 AGCCTATTGTTTTTCGGAAATGT 57.278 34.783 3.67 0.00 0.00 2.71
232 233 5.925969 ACAAGCCTATTGTTTTTCGGAAATG 59.074 36.000 3.67 0.00 0.00 2.32
233 234 5.925969 CACAAGCCTATTGTTTTTCGGAAAT 59.074 36.000 3.67 0.00 0.00 2.17
234 235 5.163499 ACACAAGCCTATTGTTTTTCGGAAA 60.163 36.000 0.00 0.00 0.00 3.13
235 236 4.339814 ACACAAGCCTATTGTTTTTCGGAA 59.660 37.500 0.00 0.00 0.00 4.30
236 237 3.886505 ACACAAGCCTATTGTTTTTCGGA 59.113 39.130 0.00 0.00 0.00 4.55
237 238 4.237349 ACACAAGCCTATTGTTTTTCGG 57.763 40.909 0.00 0.00 0.00 4.30
238 239 5.518487 ACAAACACAAGCCTATTGTTTTTCG 59.482 36.000 2.75 2.85 40.62 3.46
239 240 6.902224 ACAAACACAAGCCTATTGTTTTTC 57.098 33.333 2.75 0.00 40.62 2.29
240 241 6.093357 CCAACAAACACAAGCCTATTGTTTTT 59.907 34.615 1.79 0.37 40.62 1.94
241 242 5.584251 CCAACAAACACAAGCCTATTGTTTT 59.416 36.000 1.79 0.00 40.62 2.43
242 243 5.115480 CCAACAAACACAAGCCTATTGTTT 58.885 37.500 0.00 0.00 42.76 2.83
243 244 4.442753 CCCAACAAACACAAGCCTATTGTT 60.443 41.667 0.00 0.00 42.98 2.83
244 245 3.069443 CCCAACAAACACAAGCCTATTGT 59.931 43.478 0.00 0.00 35.86 2.71
245 246 3.554752 CCCCAACAAACACAAGCCTATTG 60.555 47.826 0.00 0.00 0.00 1.90
246 247 2.632512 CCCCAACAAACACAAGCCTATT 59.367 45.455 0.00 0.00 0.00 1.73
247 248 2.158385 TCCCCAACAAACACAAGCCTAT 60.158 45.455 0.00 0.00 0.00 2.57
248 249 1.215673 TCCCCAACAAACACAAGCCTA 59.784 47.619 0.00 0.00 0.00 3.93
249 250 0.032615 TCCCCAACAAACACAAGCCT 60.033 50.000 0.00 0.00 0.00 4.58
250 251 0.827368 TTCCCCAACAAACACAAGCC 59.173 50.000 0.00 0.00 0.00 4.35
251 252 1.205893 TGTTCCCCAACAAACACAAGC 59.794 47.619 0.00 0.00 39.69 4.01
288 289 0.830444 GTTTTTCTTCCCGCCCCCTT 60.830 55.000 0.00 0.00 0.00 3.95
294 295 2.095372 CCGACTATGTTTTTCTTCCCGC 59.905 50.000 0.00 0.00 0.00 6.13
295 296 3.124636 CACCGACTATGTTTTTCTTCCCG 59.875 47.826 0.00 0.00 0.00 5.14
301 302 3.119955 GGCTTCCACCGACTATGTTTTTC 60.120 47.826 0.00 0.00 0.00 2.29
302 303 2.817844 GGCTTCCACCGACTATGTTTTT 59.182 45.455 0.00 0.00 0.00 1.94
303 304 2.433436 GGCTTCCACCGACTATGTTTT 58.567 47.619 0.00 0.00 0.00 2.43
307 308 0.469917 ATGGGCTTCCACCGACTATG 59.530 55.000 0.00 0.00 44.44 2.23
324 325 1.659601 CTGCGCTTCTGAGAGACAATG 59.340 52.381 9.73 0.00 0.00 2.82
330 331 2.099431 GCCACTGCGCTTCTGAGAG 61.099 63.158 9.73 0.00 0.00 3.20
397 398 3.573772 CTGGTTGCTGGCGAGTCGA 62.574 63.158 18.61 0.00 0.00 4.20
882 883 6.890979 ATCAGAAAGAAGGGAAGAAAAGTG 57.109 37.500 0.00 0.00 0.00 3.16
883 884 6.266330 CCAATCAGAAAGAAGGGAAGAAAAGT 59.734 38.462 0.00 0.00 0.00 2.66
902 1083 4.160626 AGGAACGGAAAACAAAACCAATCA 59.839 37.500 0.00 0.00 0.00 2.57
948 1130 3.735894 CGCAACAAATTCGCGGAC 58.264 55.556 6.13 0.00 45.08 4.79
1134 1317 1.945394 GCTAACGGATCCTAGACACGA 59.055 52.381 10.75 0.00 0.00 4.35
1164 1347 4.487714 AGATCTCCAAAATACCGAGCAA 57.512 40.909 0.00 0.00 0.00 3.91
1173 1356 4.885907 CACATGCCACTAGATCTCCAAAAT 59.114 41.667 0.00 0.00 0.00 1.82
1178 1361 1.415659 AGCACATGCCACTAGATCTCC 59.584 52.381 0.00 0.00 43.38 3.71
1201 1384 5.185249 ACGAGCTCTAAACCTAACAATCAGA 59.815 40.000 12.85 0.00 0.00 3.27
1249 1463 6.164176 ACTACGAAAGGAAATCACTAACTGG 58.836 40.000 0.00 0.00 0.00 4.00
1303 1521 5.927689 GGAGCTAATCATCTTCATCTCAGTG 59.072 44.000 0.00 0.00 0.00 3.66
1348 1580 1.263484 CAAGCTGAACAGACACTGCAG 59.737 52.381 13.48 13.48 34.37 4.41
1356 1588 5.312895 TGCTAATTAACCAAGCTGAACAGA 58.687 37.500 5.97 0.00 37.16 3.41
1392 1624 5.919755 TGTAAACATACTCCACACAGTTCA 58.080 37.500 0.00 0.00 0.00 3.18
1396 1628 6.402550 GCTGAATGTAAACATACTCCACACAG 60.403 42.308 0.00 0.00 35.10 3.66
1436 1668 1.525077 GTGAACAGGCACCGGACAA 60.525 57.895 9.46 0.00 32.68 3.18
1447 1679 7.132694 TGTATTTAACATCAGCAGTGAACAG 57.867 36.000 0.00 0.00 35.88 3.16
1488 1836 9.474313 GAGGGAGTAGATTACTGAAGATATCAT 57.526 37.037 5.32 0.00 39.59 2.45
1492 1840 6.183361 ACGGAGGGAGTAGATTACTGAAGATA 60.183 42.308 0.00 0.00 39.59 1.98
1502 1850 2.850695 AGGAACGGAGGGAGTAGATT 57.149 50.000 0.00 0.00 0.00 2.40
1503 1851 3.967467 TTAGGAACGGAGGGAGTAGAT 57.033 47.619 0.00 0.00 0.00 1.98
1508 1856 6.494146 AGACTTATATTTAGGAACGGAGGGAG 59.506 42.308 0.00 0.00 0.00 4.30
1509 1857 6.379579 AGACTTATATTTAGGAACGGAGGGA 58.620 40.000 0.00 0.00 0.00 4.20
1510 1858 6.667558 AGACTTATATTTAGGAACGGAGGG 57.332 41.667 0.00 0.00 0.00 4.30
1511 1859 8.959705 AAAAGACTTATATTTAGGAACGGAGG 57.040 34.615 0.00 0.00 0.00 4.30
1544 1892 5.637127 TCTCCGTATGTAGTCCATATTGGA 58.363 41.667 0.00 0.00 45.98 3.53
1545 1893 5.977489 TCTCCGTATGTAGTCCATATTGG 57.023 43.478 0.00 0.00 38.29 3.16
1546 1894 8.657074 TTTTTCTCCGTATGTAGTCCATATTG 57.343 34.615 0.00 0.00 38.29 1.90
1547 1895 9.273016 CATTTTTCTCCGTATGTAGTCCATATT 57.727 33.333 0.00 0.00 38.29 1.28
1548 1896 8.647796 TCATTTTTCTCCGTATGTAGTCCATAT 58.352 33.333 0.00 0.00 38.29 1.78
1549 1897 8.014070 TCATTTTTCTCCGTATGTAGTCCATA 57.986 34.615 0.00 0.00 34.86 2.74
1550 1898 6.884832 TCATTTTTCTCCGTATGTAGTCCAT 58.115 36.000 0.00 0.00 37.58 3.41
1551 1899 6.070995 ACTCATTTTTCTCCGTATGTAGTCCA 60.071 38.462 0.00 0.00 0.00 4.02
1552 1900 6.255887 CACTCATTTTTCTCCGTATGTAGTCC 59.744 42.308 0.00 0.00 0.00 3.85
1553 1901 7.033791 TCACTCATTTTTCTCCGTATGTAGTC 58.966 38.462 0.00 0.00 0.00 2.59
1554 1902 6.931838 TCACTCATTTTTCTCCGTATGTAGT 58.068 36.000 0.00 0.00 0.00 2.73
1555 1903 7.827819 TTCACTCATTTTTCTCCGTATGTAG 57.172 36.000 0.00 0.00 0.00 2.74
1556 1904 8.258007 AGATTCACTCATTTTTCTCCGTATGTA 58.742 33.333 0.00 0.00 0.00 2.29
1557 1905 7.106239 AGATTCACTCATTTTTCTCCGTATGT 58.894 34.615 0.00 0.00 0.00 2.29
1558 1906 7.545362 AGATTCACTCATTTTTCTCCGTATG 57.455 36.000 0.00 0.00 0.00 2.39
1559 1907 8.258007 TGTAGATTCACTCATTTTTCTCCGTAT 58.742 33.333 0.00 0.00 0.00 3.06
1560 1908 7.544566 GTGTAGATTCACTCATTTTTCTCCGTA 59.455 37.037 0.00 0.00 35.68 4.02
1561 1909 6.369065 GTGTAGATTCACTCATTTTTCTCCGT 59.631 38.462 0.00 0.00 35.68 4.69
1562 1910 6.591834 AGTGTAGATTCACTCATTTTTCTCCG 59.408 38.462 0.00 0.00 44.07 4.63
1563 1911 7.913674 AGTGTAGATTCACTCATTTTTCTCC 57.086 36.000 0.00 0.00 44.07 3.71
1585 1933 7.361031 CGGATGTATATAGACGCACTTTAGAGT 60.361 40.741 0.00 0.00 36.25 3.24
1586 1934 6.962116 CGGATGTATATAGACGCACTTTAGAG 59.038 42.308 0.00 0.00 0.00 2.43
1587 1935 6.429078 ACGGATGTATATAGACGCACTTTAGA 59.571 38.462 0.00 0.00 0.00 2.10
1588 1936 6.609533 ACGGATGTATATAGACGCACTTTAG 58.390 40.000 0.00 0.00 0.00 1.85
1589 1937 6.564709 ACGGATGTATATAGACGCACTTTA 57.435 37.500 0.00 0.00 0.00 1.85
1590 1938 5.449107 ACGGATGTATATAGACGCACTTT 57.551 39.130 0.00 0.00 0.00 2.66
1591 1939 6.754702 ATACGGATGTATATAGACGCACTT 57.245 37.500 0.00 0.00 39.52 3.16
1592 1940 6.373495 TCAATACGGATGTATATAGACGCACT 59.627 38.462 0.00 0.00 40.42 4.40
1593 1941 6.549061 TCAATACGGATGTATATAGACGCAC 58.451 40.000 0.00 0.00 40.42 5.34
1594 1942 6.746745 TCAATACGGATGTATATAGACGCA 57.253 37.500 0.00 0.00 40.42 5.24
1595 1943 8.630278 ATTTCAATACGGATGTATATAGACGC 57.370 34.615 0.00 0.00 40.42 5.19
1596 1944 9.783256 TGATTTCAATACGGATGTATATAGACG 57.217 33.333 0.00 0.00 40.42 4.18
1604 1952 9.104965 CCTTTTAGTGATTTCAATACGGATGTA 57.895 33.333 0.00 0.00 34.45 2.29
1605 1953 7.827236 TCCTTTTAGTGATTTCAATACGGATGT 59.173 33.333 0.00 0.00 0.00 3.06
1606 1954 8.122952 GTCCTTTTAGTGATTTCAATACGGATG 58.877 37.037 0.00 0.00 0.00 3.51
1607 1955 8.047310 AGTCCTTTTAGTGATTTCAATACGGAT 58.953 33.333 0.00 0.00 0.00 4.18
1608 1956 7.391620 AGTCCTTTTAGTGATTTCAATACGGA 58.608 34.615 0.00 0.00 0.00 4.69
1609 1957 7.611213 AGTCCTTTTAGTGATTTCAATACGG 57.389 36.000 0.00 0.00 0.00 4.02
1620 1968 8.636213 CCGTTCCTATATAAGTCCTTTTAGTGA 58.364 37.037 0.00 0.00 0.00 3.41
1621 1969 8.636213 TCCGTTCCTATATAAGTCCTTTTAGTG 58.364 37.037 0.00 0.00 0.00 2.74
1622 1970 8.773033 TCCGTTCCTATATAAGTCCTTTTAGT 57.227 34.615 0.00 0.00 0.00 2.24
1623 1971 8.305317 CCTCCGTTCCTATATAAGTCCTTTTAG 58.695 40.741 0.00 0.00 0.00 1.85
1624 1972 7.234166 CCCTCCGTTCCTATATAAGTCCTTTTA 59.766 40.741 0.00 0.00 0.00 1.52
1625 1973 6.042897 CCCTCCGTTCCTATATAAGTCCTTTT 59.957 42.308 0.00 0.00 0.00 2.27
1626 1974 5.543020 CCCTCCGTTCCTATATAAGTCCTTT 59.457 44.000 0.00 0.00 0.00 3.11
1627 1975 5.085219 CCCTCCGTTCCTATATAAGTCCTT 58.915 45.833 0.00 0.00 0.00 3.36
1628 1976 4.356190 TCCCTCCGTTCCTATATAAGTCCT 59.644 45.833 0.00 0.00 0.00 3.85
1629 1977 4.670765 TCCCTCCGTTCCTATATAAGTCC 58.329 47.826 0.00 0.00 0.00 3.85
1630 1978 4.158209 GCTCCCTCCGTTCCTATATAAGTC 59.842 50.000 0.00 0.00 0.00 3.01
1631 1979 4.087907 GCTCCCTCCGTTCCTATATAAGT 58.912 47.826 0.00 0.00 0.00 2.24
1632 1980 4.087182 TGCTCCCTCCGTTCCTATATAAG 58.913 47.826 0.00 0.00 0.00 1.73
1633 1981 4.122337 TGCTCCCTCCGTTCCTATATAA 57.878 45.455 0.00 0.00 0.00 0.98
1634 1982 3.820195 TGCTCCCTCCGTTCCTATATA 57.180 47.619 0.00 0.00 0.00 0.86
1635 1983 2.696526 TGCTCCCTCCGTTCCTATAT 57.303 50.000 0.00 0.00 0.00 0.86
1636 1984 2.696526 ATGCTCCCTCCGTTCCTATA 57.303 50.000 0.00 0.00 0.00 1.31
1637 1985 2.696526 TATGCTCCCTCCGTTCCTAT 57.303 50.000 0.00 0.00 0.00 2.57
1638 1986 2.696526 ATATGCTCCCTCCGTTCCTA 57.303 50.000 0.00 0.00 0.00 2.94
1639 1987 2.696526 TATATGCTCCCTCCGTTCCT 57.303 50.000 0.00 0.00 0.00 3.36
1640 1988 3.983044 AATATATGCTCCCTCCGTTCC 57.017 47.619 0.00 0.00 0.00 3.62
1641 1989 6.049790 GGAATAATATATGCTCCCTCCGTTC 58.950 44.000 0.00 0.00 0.00 3.95
1642 1990 5.487488 TGGAATAATATATGCTCCCTCCGTT 59.513 40.000 5.84 0.00 0.00 4.44
1643 1991 5.030147 TGGAATAATATATGCTCCCTCCGT 58.970 41.667 5.84 0.00 0.00 4.69
1644 1992 5.614324 TGGAATAATATATGCTCCCTCCG 57.386 43.478 5.84 0.00 0.00 4.63
1645 1993 6.158695 TCCTTGGAATAATATATGCTCCCTCC 59.841 42.308 5.84 0.00 0.00 4.30
1646 1994 7.200434 TCCTTGGAATAATATATGCTCCCTC 57.800 40.000 5.84 0.00 0.00 4.30
1647 1995 7.588866 TTCCTTGGAATAATATATGCTCCCT 57.411 36.000 0.00 0.00 0.00 4.20
1696 2044 9.976511 GCAACTAATGTACATTACTCCACTATA 57.023 33.333 21.73 2.70 32.50 1.31
1703 2051 8.703604 TTCTCAGCAACTAATGTACATTACTC 57.296 34.615 21.73 11.93 32.50 2.59
1709 2057 6.935167 TCTCATTCTCAGCAACTAATGTACA 58.065 36.000 0.00 0.00 32.43 2.90
1724 2075 4.514441 ACATCCGAATGCATTCTCATTCTC 59.486 41.667 31.12 9.00 46.15 2.87
1741 2092 1.539065 GGACATACAGAGGCACATCCG 60.539 57.143 0.00 0.00 40.77 4.18
1748 2102 0.466124 GTGAGGGGACATACAGAGGC 59.534 60.000 0.00 0.00 0.00 4.70
1759 2113 4.207165 CAAGAAGAAAGTTTGTGAGGGGA 58.793 43.478 0.00 0.00 0.00 4.81
1766 2120 4.142160 GGGAGCAACAAGAAGAAAGTTTGT 60.142 41.667 0.00 0.00 36.66 2.83
1770 2124 3.117888 TCAGGGAGCAACAAGAAGAAAGT 60.118 43.478 0.00 0.00 0.00 2.66
1774 2128 2.639347 TCATCAGGGAGCAACAAGAAGA 59.361 45.455 0.00 0.00 0.00 2.87
1778 2132 4.796038 AAAATCATCAGGGAGCAACAAG 57.204 40.909 0.00 0.00 0.00 3.16
1809 2163 5.277538 GCAAGTGTGTTCTCTTCTAGGTTTG 60.278 44.000 0.00 0.00 0.00 2.93
1823 2177 1.134946 GCACCTTTCAGCAAGTGTGTT 59.865 47.619 0.00 0.00 36.65 3.32
1825 2179 0.740149 TGCACCTTTCAGCAAGTGTG 59.260 50.000 0.00 0.00 37.90 3.82
1826 2180 1.473258 TTGCACCTTTCAGCAAGTGT 58.527 45.000 0.00 0.00 44.98 3.55
1846 2519 9.781834 TTTCATAAAACGTCCTTATATTGCTTG 57.218 29.630 0.00 0.00 0.00 4.01
1866 2539 9.638239 GTTCTCCAGTTGCAATTAAATTTCATA 57.362 29.630 0.59 0.00 0.00 2.15
1914 2587 8.531982 TCTTCAAGTCATATTTGCTACAGTACT 58.468 33.333 0.00 0.00 0.00 2.73
1972 2646 4.497507 GCCAGAACACCTCAAGTAACAAAC 60.498 45.833 0.00 0.00 0.00 2.93
2147 2821 7.880160 TTCCCAAATTATACATGACTGAAGG 57.120 36.000 0.00 0.00 0.00 3.46
2161 2835 8.431222 GGATCCAAATGATGATTTCCCAAATTA 58.569 33.333 6.95 0.00 32.41 1.40
2165 2839 5.364446 CAGGATCCAAATGATGATTTCCCAA 59.636 40.000 15.82 0.00 32.41 4.12
2166 2840 4.897076 CAGGATCCAAATGATGATTTCCCA 59.103 41.667 15.82 0.00 32.41 4.37
2167 2841 4.897670 ACAGGATCCAAATGATGATTTCCC 59.102 41.667 15.82 0.00 32.41 3.97
2168 2842 5.832060 AGACAGGATCCAAATGATGATTTCC 59.168 40.000 15.82 0.00 32.41 3.13
2169 2843 6.238953 CCAGACAGGATCCAAATGATGATTTC 60.239 42.308 15.82 0.00 41.22 2.17
2170 2844 5.597182 CCAGACAGGATCCAAATGATGATTT 59.403 40.000 15.82 0.00 41.22 2.17
2171 2845 5.138276 CCAGACAGGATCCAAATGATGATT 58.862 41.667 15.82 0.00 41.22 2.57
2172 2846 4.726583 CCAGACAGGATCCAAATGATGAT 58.273 43.478 15.82 0.00 41.22 2.45
2173 2847 3.686405 GCCAGACAGGATCCAAATGATGA 60.686 47.826 15.82 0.00 41.22 2.92
2174 2848 2.621998 GCCAGACAGGATCCAAATGATG 59.378 50.000 15.82 4.58 41.22 3.07
2175 2849 2.512896 AGCCAGACAGGATCCAAATGAT 59.487 45.455 15.82 0.00 41.22 2.45
2176 2850 1.918262 AGCCAGACAGGATCCAAATGA 59.082 47.619 15.82 0.00 41.22 2.57
2177 2851 2.431954 AGCCAGACAGGATCCAAATG 57.568 50.000 15.82 6.20 41.22 2.32
2184 2858 1.949799 ACTGAAGAGCCAGACAGGAT 58.050 50.000 0.00 0.00 41.22 3.24
2185 2859 1.722034 AACTGAAGAGCCAGACAGGA 58.278 50.000 0.00 0.00 41.22 3.86
2186 2860 2.557920 AAACTGAAGAGCCAGACAGG 57.442 50.000 0.00 0.00 37.59 4.00
2187 2861 4.527509 TCTAAACTGAAGAGCCAGACAG 57.472 45.455 0.00 0.00 37.59 3.51
2188 2862 4.955811 TTCTAAACTGAAGAGCCAGACA 57.044 40.909 0.00 0.00 37.59 3.41
2189 2863 5.301555 AGTTTCTAAACTGAAGAGCCAGAC 58.698 41.667 7.29 0.00 46.80 3.51
2190 2864 5.552870 AGTTTCTAAACTGAAGAGCCAGA 57.447 39.130 7.29 0.00 46.80 3.86
2214 2888 3.366985 CCGAGTTAGAAAATGGGCAAACC 60.367 47.826 0.00 0.00 40.81 3.27
2215 2889 3.366985 CCCGAGTTAGAAAATGGGCAAAC 60.367 47.826 0.00 0.00 0.00 2.93
2216 2890 2.823154 CCCGAGTTAGAAAATGGGCAAA 59.177 45.455 0.00 0.00 0.00 3.68
2217 2891 2.040545 TCCCGAGTTAGAAAATGGGCAA 59.959 45.455 0.00 0.00 36.56 4.52
2218 2892 1.631388 TCCCGAGTTAGAAAATGGGCA 59.369 47.619 0.00 0.00 36.56 5.36
2219 2893 2.413310 TCCCGAGTTAGAAAATGGGC 57.587 50.000 0.00 0.00 36.56 5.36
2220 2894 4.947388 TGATTTCCCGAGTTAGAAAATGGG 59.053 41.667 0.00 0.00 35.72 4.00
2221 2895 6.699575 ATGATTTCCCGAGTTAGAAAATGG 57.300 37.500 0.00 0.00 35.72 3.16
2222 2896 6.473455 GCAATGATTTCCCGAGTTAGAAAATG 59.527 38.462 0.00 0.00 35.72 2.32
2223 2897 6.378280 AGCAATGATTTCCCGAGTTAGAAAAT 59.622 34.615 0.00 0.00 35.72 1.82
2224 2898 5.710099 AGCAATGATTTCCCGAGTTAGAAAA 59.290 36.000 0.00 0.00 35.72 2.29
2225 2899 5.123820 CAGCAATGATTTCCCGAGTTAGAAA 59.876 40.000 0.00 0.00 36.48 2.52
2226 2900 4.635765 CAGCAATGATTTCCCGAGTTAGAA 59.364 41.667 0.00 0.00 0.00 2.10
2227 2901 4.191544 CAGCAATGATTTCCCGAGTTAGA 58.808 43.478 0.00 0.00 0.00 2.10
2228 2902 3.313526 CCAGCAATGATTTCCCGAGTTAG 59.686 47.826 0.00 0.00 0.00 2.34
2229 2903 3.278574 CCAGCAATGATTTCCCGAGTTA 58.721 45.455 0.00 0.00 0.00 2.24
2230 2904 2.094675 CCAGCAATGATTTCCCGAGTT 58.905 47.619 0.00 0.00 0.00 3.01
2231 2905 1.683011 CCCAGCAATGATTTCCCGAGT 60.683 52.381 0.00 0.00 0.00 4.18
2232 2906 1.027357 CCCAGCAATGATTTCCCGAG 58.973 55.000 0.00 0.00 0.00 4.63
2247 2921 2.608988 AGCCTGACAGGGTCCCAG 60.609 66.667 20.65 4.32 43.92 4.45
2260 2934 1.683385 GGTTGCAAAACTGAAGAGCCT 59.317 47.619 0.00 0.00 0.00 4.58
2280 2955 1.009675 GCAACGCAATGCTATCGGG 60.010 57.895 2.94 0.00 43.06 5.14
2295 2970 4.824537 TCAGTTGGTAAATAGTTGCAGCAA 59.175 37.500 2.83 2.83 0.00 3.91
2360 3040 9.674068 TGCTTATGTCAACACCTACAAAATATA 57.326 29.630 0.00 0.00 0.00 0.86
2457 3137 3.138304 CCGAATGTTGTTTCCTCTCACA 58.862 45.455 0.00 0.00 0.00 3.58
3067 3751 4.930405 TCAACGCGTAATCTGAAATACCAA 59.070 37.500 14.46 0.00 0.00 3.67
3086 3770 7.590322 GTGCATGATTCAGATGAATATGTCAAC 59.410 37.037 8.01 8.68 44.14 3.18
3113 3797 5.711506 TCATACAGGCAAGAAATGTTCACAT 59.288 36.000 0.00 0.00 38.41 3.21
3117 3801 5.039333 GCATCATACAGGCAAGAAATGTTC 58.961 41.667 0.00 0.00 0.00 3.18
3118 3802 4.439153 CGCATCATACAGGCAAGAAATGTT 60.439 41.667 0.00 0.00 0.00 2.71
3122 3806 2.984562 TCGCATCATACAGGCAAGAAA 58.015 42.857 0.00 0.00 0.00 2.52
3137 3821 3.198409 TGATCAAGCCTAACATCGCAT 57.802 42.857 0.00 0.00 0.00 4.73
3158 3842 5.990996 GGGCAGAAAATCAAATCACAGAAAA 59.009 36.000 0.00 0.00 0.00 2.29
3201 3885 9.308000 TGATTCCATTTGTTCCAAACTTATACT 57.692 29.630 0.00 0.00 0.00 2.12
3258 3942 5.188434 CAACATCACCCATCATCTAACTGT 58.812 41.667 0.00 0.00 0.00 3.55
3300 3984 3.246226 CAGCATCAAACGTAGCCTATGAC 59.754 47.826 0.00 0.00 0.00 3.06
3458 4152 8.835439 CCGGTTACAAAAACTTTTACCTAACTA 58.165 33.333 0.00 0.00 28.66 2.24
3459 4153 7.681782 GCCGGTTACAAAAACTTTTACCTAACT 60.682 37.037 1.90 0.00 28.66 2.24
3460 4154 6.417635 GCCGGTTACAAAAACTTTTACCTAAC 59.582 38.462 1.90 3.04 28.66 2.34
3461 4155 6.460814 GGCCGGTTACAAAAACTTTTACCTAA 60.461 38.462 1.90 0.00 28.66 2.69
3463 4157 4.202141 GGCCGGTTACAAAAACTTTTACCT 60.202 41.667 1.90 0.00 28.66 3.08
3475 4169 0.110678 TGGAATGTGGCCGGTTACAA 59.889 50.000 15.22 0.00 0.00 2.41
3556 4261 2.804421 CAACGCTCGTTGCATGATTA 57.196 45.000 19.97 0.00 46.92 1.75
3580 4285 3.423154 GGCCAAACCTGTCGCTCG 61.423 66.667 0.00 0.00 34.51 5.03
3620 4343 0.893270 CTCCGGCCAACATTTGTCCA 60.893 55.000 2.24 0.00 0.00 4.02
3650 4373 3.067180 AACGTAAGACGGTGAAGAGACAA 59.933 43.478 3.82 0.00 41.66 3.18


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.