Multiple sequence alignment - TraesCS2B01G350000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G350000 chr2B 100.000 2514 0 0 1 2514 496513575 496511062 0.000000e+00 4643.0
1 TraesCS2B01G350000 chr2B 94.076 709 41 1 917 1624 496118397 496117689 0.000000e+00 1075.0
2 TraesCS2B01G350000 chr2B 81.971 1187 122 53 541 1662 496351666 496350507 0.000000e+00 922.0
3 TraesCS2B01G350000 chr2B 81.209 1059 112 50 541 1536 496355980 496354946 0.000000e+00 773.0
4 TraesCS2B01G350000 chr2B 81.020 1059 114 50 541 1536 496353823 496352789 0.000000e+00 761.0
5 TraesCS2B01G350000 chr2B 85.185 702 61 19 828 1513 496088060 496087386 0.000000e+00 680.0
6 TraesCS2B01G350000 chr2B 83.356 745 73 21 826 1542 496073727 496073006 2.110000e-180 641.0
7 TraesCS2B01G350000 chr2B 81.599 663 82 28 826 1458 496360006 496359354 1.720000e-141 512.0
8 TraesCS2B01G350000 chr2B 96.169 261 10 0 1659 1919 496538363 496538103 6.430000e-116 427.0
9 TraesCS2B01G350000 chr2B 96.250 160 5 1 199 358 186376284 186376126 6.900000e-66 261.0
10 TraesCS2B01G350000 chr2B 79.714 419 40 18 828 1226 496213510 496213117 6.900000e-66 261.0
11 TraesCS2B01G350000 chr2B 94.186 172 6 4 197 367 101527084 101527252 2.480000e-65 259.0
12 TraesCS2B01G350000 chr2B 93.939 165 7 1 1 165 496131466 496131305 1.930000e-61 246.0
13 TraesCS2B01G350000 chr2B 96.454 141 5 0 2036 2176 496117642 496117502 1.500000e-57 233.0
14 TraesCS2B01G350000 chr2B 86.585 164 21 1 378 540 496351860 496351697 1.990000e-41 180.0
15 TraesCS2B01G350000 chr2B 86.585 164 21 1 378 540 496354017 496353854 1.990000e-41 180.0
16 TraesCS2B01G350000 chr2B 86.585 164 21 1 378 540 496356174 496356011 1.990000e-41 180.0
17 TraesCS2B01G350000 chr2B 93.976 83 2 3 2066 2147 496330033 496329953 3.400000e-24 122.0
18 TraesCS2B01G350000 chr2B 79.375 160 11 10 676 815 496542719 496542562 2.660000e-15 93.5
19 TraesCS2B01G350000 chr2B 82.524 103 13 3 2191 2290 693754291 693754391 4.460000e-13 86.1
20 TraesCS2B01G350000 chr2B 97.872 47 1 0 1924 1970 496333090 496333044 5.760000e-12 82.4
21 TraesCS2B01G350000 chr2A 91.462 1300 78 11 369 1638 565255492 565256788 0.000000e+00 1755.0
22 TraesCS2B01G350000 chr2A 82.477 856 82 28 837 1656 565282755 565283578 0.000000e+00 688.0
23 TraesCS2B01G350000 chr2A 84.681 705 76 18 828 1513 565288136 565288827 0.000000e+00 675.0
24 TraesCS2B01G350000 chr2A 92.583 391 25 2 1276 1662 565270209 565270599 2.180000e-155 558.0
25 TraesCS2B01G350000 chr2A 94.297 263 15 0 1660 1922 192092737 192092475 1.080000e-108 403.0
26 TraesCS2B01G350000 chr2A 92.466 146 9 1 2033 2176 565270666 565270811 9.110000e-50 207.0
27 TraesCS2B01G350000 chr2A 90.678 118 9 2 1 116 565255213 565255330 3.350000e-34 156.0
28 TraesCS2B01G350000 chr2A 97.333 75 2 0 1920 1994 565270598 565270672 7.300000e-26 128.0
29 TraesCS2B01G350000 chr2D 83.011 724 61 21 826 1523 423288467 423287780 1.290000e-167 599.0
30 TraesCS2B01G350000 chr2D 92.361 432 13 2 543 956 423311424 423310995 4.630000e-167 597.0
31 TraesCS2B01G350000 chr2D 83.016 683 53 29 974 1620 423292542 423291887 6.070000e-156 560.0
32 TraesCS2B01G350000 chr2D 93.916 263 16 0 1661 1923 638340611 638340873 5.040000e-107 398.0
33 TraesCS2B01G350000 chr2D 77.515 507 59 28 368 823 423293182 423292680 1.150000e-63 254.0
34 TraesCS2B01G350000 chr2D 93.706 143 8 1 368 509 423311565 423311423 1.960000e-51 213.0
35 TraesCS2B01G350000 chr2D 92.414 145 5 3 2033 2172 423309125 423308982 4.240000e-48 202.0
36 TraesCS2B01G350000 chr2D 92.857 84 2 1 1920 1999 423309197 423309114 4.390000e-23 119.0
37 TraesCS2B01G350000 chr2D 86.111 108 11 4 56 162 423311760 423311656 2.040000e-21 113.0
38 TraesCS2B01G350000 chr2D 88.608 79 9 0 2065 2143 423291765 423291687 2.060000e-16 97.1
39 TraesCS2B01G350000 chr2D 100.000 29 0 0 636 664 423348205 423348177 1.000000e-03 54.7
40 TraesCS2B01G350000 chr6B 95.802 262 11 0 1660 1921 707342858 707342597 8.310000e-115 424.0
41 TraesCS2B01G350000 chr6D 94.030 268 15 1 1660 1926 151317474 151317207 3.010000e-109 405.0
42 TraesCS2B01G350000 chr7B 93.585 265 17 0 1658 1922 464539689 464539953 1.810000e-106 396.0
43 TraesCS2B01G350000 chr3B 93.015 272 18 1 1657 1928 464610209 464610479 1.810000e-106 396.0
44 TraesCS2B01G350000 chr3D 91.608 286 22 2 1661 1944 421266370 421266655 6.520000e-106 394.0
45 TraesCS2B01G350000 chr3D 83.133 83 10 3 2208 2290 573691885 573691963 3.470000e-09 73.1
46 TraesCS2B01G350000 chr1D 93.536 263 17 0 1660 1922 153918986 153918724 2.340000e-105 392.0
47 TraesCS2B01G350000 chrUn 87.463 335 37 3 2183 2514 349520390 349520722 5.070000e-102 381.0
48 TraesCS2B01G350000 chrUn 87.463 335 37 3 2183 2514 422538013 422538345 5.070000e-102 381.0
49 TraesCS2B01G350000 chrUn 87.164 335 38 3 2183 2514 369336675 369337007 2.360000e-100 375.0
50 TraesCS2B01G350000 chrUn 87.164 335 38 3 2183 2514 369352139 369352471 2.360000e-100 375.0
51 TraesCS2B01G350000 chrUn 87.164 335 38 3 2183 2514 424603583 424603915 2.360000e-100 375.0
52 TraesCS2B01G350000 chrUn 94.253 174 8 2 186 359 82169430 82169259 5.330000e-67 265.0
53 TraesCS2B01G350000 chr5A 89.076 238 21 1 2276 2513 347411942 347412174 8.800000e-75 291.0
54 TraesCS2B01G350000 chr5A 92.571 175 11 2 197 370 368169634 368169461 1.490000e-62 250.0
55 TraesCS2B01G350000 chr3A 96.250 160 6 0 197 356 34441019 34440860 1.920000e-66 263.0
56 TraesCS2B01G350000 chr3A 83.133 83 10 3 2208 2290 708324068 708324146 3.470000e-09 73.1
57 TraesCS2B01G350000 chr6A 94.643 168 8 1 197 363 461985336 461985169 2.480000e-65 259.0
58 TraesCS2B01G350000 chr5B 96.226 159 5 1 201 359 690679537 690679694 2.480000e-65 259.0
59 TraesCS2B01G350000 chr5B 93.064 173 9 3 189 361 617274554 617274385 1.490000e-62 250.0
60 TraesCS2B01G350000 chr1A 94.545 165 9 0 194 358 137911043 137911207 3.210000e-64 255.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G350000 chr2B 496511062 496513575 2513 True 4643.000000 4643 100.000000 1 2514 1 chr2B.!!$R6 2513
1 TraesCS2B01G350000 chr2B 496087386 496088060 674 True 680.000000 680 85.185000 828 1513 1 chr2B.!!$R3 685
2 TraesCS2B01G350000 chr2B 496117502 496118397 895 True 654.000000 1075 95.265000 917 2176 2 chr2B.!!$R9 1259
3 TraesCS2B01G350000 chr2B 496073006 496073727 721 True 641.000000 641 83.356000 826 1542 1 chr2B.!!$R2 716
4 TraesCS2B01G350000 chr2B 496350507 496360006 9499 True 501.142857 922 83.650571 378 1662 7 chr2B.!!$R11 1284
5 TraesCS2B01G350000 chr2A 565255213 565256788 1575 False 955.500000 1755 91.070000 1 1638 2 chr2A.!!$F3 1637
6 TraesCS2B01G350000 chr2A 565282755 565283578 823 False 688.000000 688 82.477000 837 1656 1 chr2A.!!$F1 819
7 TraesCS2B01G350000 chr2A 565288136 565288827 691 False 675.000000 675 84.681000 828 1513 1 chr2A.!!$F2 685
8 TraesCS2B01G350000 chr2A 565270209 565270811 602 False 297.666667 558 94.127333 1276 2176 3 chr2A.!!$F4 900
9 TraesCS2B01G350000 chr2D 423287780 423293182 5402 True 377.525000 599 83.037500 368 2143 4 chr2D.!!$R2 1775
10 TraesCS2B01G350000 chr2D 423308982 423311760 2778 True 248.800000 597 91.489800 56 2172 5 chr2D.!!$R3 2116

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
230 261 0.035056 AACTCATGGGCACTAGCACC 60.035 55.0 0.0 0.0 46.13 5.01 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1602 15220 0.026803 GCCAAGCGAGCTCGTAAATG 59.973 55.0 34.46 25.45 42.22 2.32 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
28 30 5.428184 CCTTTCATGAGGTAAGAAGAGGT 57.572 43.478 7.12 0.00 31.89 3.85
32 34 7.883311 CCTTTCATGAGGTAAGAAGAGGTAAAA 59.117 37.037 7.12 0.00 31.89 1.52
35 37 6.729100 TCATGAGGTAAGAAGAGGTAAAAGGA 59.271 38.462 0.00 0.00 0.00 3.36
36 38 7.236847 TCATGAGGTAAGAAGAGGTAAAAGGAA 59.763 37.037 0.00 0.00 0.00 3.36
39 41 6.641474 AGGTAAGAAGAGGTAAAAGGAATCG 58.359 40.000 0.00 0.00 0.00 3.34
54 56 4.385825 AGGAATCGTGTTAAAACTGCTCA 58.614 39.130 0.00 0.00 0.00 4.26
95 126 1.607148 GTAGCAAACCCAGTTGGACAC 59.393 52.381 0.00 0.00 37.39 3.67
221 252 5.397142 AAAAGAAGATGAAACTCATGGGC 57.603 39.130 0.00 0.00 37.20 5.36
222 253 3.726557 AGAAGATGAAACTCATGGGCA 57.273 42.857 0.00 0.00 37.20 5.36
223 254 3.350833 AGAAGATGAAACTCATGGGCAC 58.649 45.455 0.00 0.00 37.20 5.01
224 255 3.009916 AGAAGATGAAACTCATGGGCACT 59.990 43.478 0.00 0.00 37.20 4.40
225 256 4.225942 AGAAGATGAAACTCATGGGCACTA 59.774 41.667 0.00 0.00 37.20 2.74
226 257 4.148128 AGATGAAACTCATGGGCACTAG 57.852 45.455 0.00 0.00 37.20 2.57
227 258 2.113860 TGAAACTCATGGGCACTAGC 57.886 50.000 0.00 0.00 41.10 3.42
228 259 1.350684 TGAAACTCATGGGCACTAGCA 59.649 47.619 0.00 0.00 44.61 3.49
230 261 0.035056 AACTCATGGGCACTAGCACC 60.035 55.000 0.00 0.00 46.13 5.01
231 262 1.153086 CTCATGGGCACTAGCACCC 60.153 63.158 12.83 12.83 46.13 4.61
235 266 2.124151 GGGCACTAGCACCCATGG 60.124 66.667 14.48 4.14 46.22 3.66
236 267 2.677228 GGCACTAGCACCCATGGT 59.323 61.111 11.73 0.00 44.61 3.55
238 269 0.611896 GGCACTAGCACCCATGGTTT 60.612 55.000 11.73 0.00 44.61 3.27
240 271 2.654863 GCACTAGCACCCATGGTTTAT 58.345 47.619 11.73 0.00 41.58 1.40
248 279 8.103305 ACTAGCACCCATGGTTTATTGATATAG 58.897 37.037 11.73 5.91 37.77 1.31
250 281 6.045459 AGCACCCATGGTTTATTGATATAGGA 59.955 38.462 11.73 0.00 31.02 2.94
253 284 8.163408 CACCCATGGTTTATTGATATAGGAGAA 58.837 37.037 11.73 0.00 31.02 2.87
254 285 8.386264 ACCCATGGTTTATTGATATAGGAGAAG 58.614 37.037 11.73 0.00 27.29 2.85
256 287 7.884877 CCATGGTTTATTGATATAGGAGAAGCA 59.115 37.037 2.57 0.00 0.00 3.91
257 288 9.458727 CATGGTTTATTGATATAGGAGAAGCAT 57.541 33.333 0.00 0.00 35.22 3.79
258 289 9.678260 ATGGTTTATTGATATAGGAGAAGCATC 57.322 33.333 0.00 0.00 30.83 3.91
261 292 8.325046 GTTTATTGATATAGGAGAAGCATCCCT 58.675 37.037 4.70 4.70 40.53 4.20
264 295 5.158141 TGATATAGGAGAAGCATCCCTTGT 58.842 41.667 4.62 0.00 40.53 3.16
265 296 6.322931 TGATATAGGAGAAGCATCCCTTGTA 58.677 40.000 4.62 1.11 40.53 2.41
267 298 3.922171 AGGAGAAGCATCCCTTGTAAG 57.078 47.619 0.00 0.00 40.53 2.34
270 301 4.289672 AGGAGAAGCATCCCTTGTAAGAAA 59.710 41.667 0.00 0.00 40.53 2.52
272 303 4.336280 AGAAGCATCCCTTGTAAGAAACC 58.664 43.478 0.00 0.00 32.78 3.27
273 304 3.806949 AGCATCCCTTGTAAGAAACCA 57.193 42.857 0.00 0.00 0.00 3.67
274 305 3.690460 AGCATCCCTTGTAAGAAACCAG 58.310 45.455 0.00 0.00 0.00 4.00
276 307 4.079253 GCATCCCTTGTAAGAAACCAGAA 58.921 43.478 0.00 0.00 0.00 3.02
277 308 4.522789 GCATCCCTTGTAAGAAACCAGAAA 59.477 41.667 0.00 0.00 0.00 2.52
278 309 5.185828 GCATCCCTTGTAAGAAACCAGAAAT 59.814 40.000 0.00 0.00 0.00 2.17
279 310 6.295292 GCATCCCTTGTAAGAAACCAGAAATT 60.295 38.462 0.00 0.00 0.00 1.82
280 311 6.894339 TCCCTTGTAAGAAACCAGAAATTC 57.106 37.500 0.00 0.00 0.00 2.17
281 312 5.472137 TCCCTTGTAAGAAACCAGAAATTCG 59.528 40.000 0.00 0.00 0.00 3.34
282 313 5.240844 CCCTTGTAAGAAACCAGAAATTCGT 59.759 40.000 0.00 0.00 0.00 3.85
283 314 6.371389 CCTTGTAAGAAACCAGAAATTCGTC 58.629 40.000 0.00 0.00 0.00 4.20
285 316 4.758165 TGTAAGAAACCAGAAATTCGTCCC 59.242 41.667 0.00 0.00 0.00 4.46
287 318 1.467342 GAAACCAGAAATTCGTCCCCG 59.533 52.381 0.00 0.00 0.00 5.73
288 319 0.688487 AACCAGAAATTCGTCCCCGA 59.312 50.000 0.00 0.00 42.41 5.14
290 321 2.112998 ACCAGAAATTCGTCCCCGATA 58.887 47.619 0.00 0.00 43.80 2.92
292 323 3.067106 CCAGAAATTCGTCCCCGATATG 58.933 50.000 0.00 0.00 43.80 1.78
293 324 3.067106 CAGAAATTCGTCCCCGATATGG 58.933 50.000 0.00 0.00 43.80 2.74
294 325 1.804748 GAAATTCGTCCCCGATATGGC 59.195 52.381 0.00 0.00 43.80 4.40
295 326 1.056660 AATTCGTCCCCGATATGGCT 58.943 50.000 0.00 0.00 43.80 4.75
296 327 0.608640 ATTCGTCCCCGATATGGCTC 59.391 55.000 0.00 0.00 43.80 4.70
299 330 1.802337 CGTCCCCGATATGGCTCGAA 61.802 60.000 0.00 0.00 41.12 3.71
300 331 0.319641 GTCCCCGATATGGCTCGAAC 60.320 60.000 0.00 0.00 41.12 3.95
301 332 1.004918 CCCCGATATGGCTCGAACC 60.005 63.158 0.00 0.00 41.12 3.62
302 333 1.004918 CCCGATATGGCTCGAACCC 60.005 63.158 1.61 0.00 41.12 4.11
303 334 1.472662 CCCGATATGGCTCGAACCCT 61.473 60.000 1.61 0.00 41.12 4.34
304 335 0.319900 CCGATATGGCTCGAACCCTG 60.320 60.000 1.61 0.00 41.12 4.45
305 336 0.319900 CGATATGGCTCGAACCCTGG 60.320 60.000 1.61 0.00 41.12 4.45
306 337 0.759346 GATATGGCTCGAACCCTGGT 59.241 55.000 1.61 0.00 0.00 4.00
307 338 1.141053 GATATGGCTCGAACCCTGGTT 59.859 52.381 1.61 0.07 41.54 3.67
308 339 0.251916 TATGGCTCGAACCCTGGTTG 59.748 55.000 6.24 0.00 38.60 3.77
309 340 3.056328 GGCTCGAACCCTGGTTGC 61.056 66.667 6.24 3.86 38.60 4.17
310 341 2.032681 GCTCGAACCCTGGTTGCT 59.967 61.111 6.24 0.00 38.60 3.91
311 342 1.295423 GCTCGAACCCTGGTTGCTA 59.705 57.895 6.24 0.00 38.60 3.49
312 343 0.741221 GCTCGAACCCTGGTTGCTAG 60.741 60.000 6.24 2.36 38.60 3.42
313 344 0.895530 CTCGAACCCTGGTTGCTAGA 59.104 55.000 6.24 0.39 38.60 2.43
314 345 0.895530 TCGAACCCTGGTTGCTAGAG 59.104 55.000 6.24 0.00 38.60 2.43
315 346 0.895530 CGAACCCTGGTTGCTAGAGA 59.104 55.000 6.24 0.00 38.60 3.10
316 347 1.482593 CGAACCCTGGTTGCTAGAGAT 59.517 52.381 6.24 0.00 38.60 2.75
317 348 2.739932 CGAACCCTGGTTGCTAGAGATG 60.740 54.545 6.24 0.00 38.60 2.90
318 349 0.543749 ACCCTGGTTGCTAGAGATGC 59.456 55.000 0.00 0.00 0.00 3.91
319 350 0.179034 CCCTGGTTGCTAGAGATGCC 60.179 60.000 0.00 0.00 0.00 4.40
320 351 0.543277 CCTGGTTGCTAGAGATGCCA 59.457 55.000 0.00 0.00 0.00 4.92
321 352 1.661341 CTGGTTGCTAGAGATGCCAC 58.339 55.000 0.00 0.00 0.00 5.01
322 353 1.209019 CTGGTTGCTAGAGATGCCACT 59.791 52.381 0.00 0.00 0.00 4.00
323 354 1.065926 TGGTTGCTAGAGATGCCACTG 60.066 52.381 0.00 0.00 0.00 3.66
324 355 1.012841 GTTGCTAGAGATGCCACTGC 58.987 55.000 0.00 0.00 38.26 4.40
325 356 0.460811 TTGCTAGAGATGCCACTGCG 60.461 55.000 0.00 0.00 41.78 5.18
326 357 2.243264 GCTAGAGATGCCACTGCGC 61.243 63.158 0.00 0.00 41.78 6.09
327 358 1.440893 CTAGAGATGCCACTGCGCT 59.559 57.895 9.73 0.00 41.78 5.92
328 359 0.597118 CTAGAGATGCCACTGCGCTC 60.597 60.000 9.73 0.00 41.78 5.03
329 360 2.021068 TAGAGATGCCACTGCGCTCC 62.021 60.000 9.73 0.00 40.43 4.70
330 361 4.479993 AGATGCCACTGCGCTCCC 62.480 66.667 9.73 0.00 41.78 4.30
331 362 4.479993 GATGCCACTGCGCTCCCT 62.480 66.667 9.73 0.00 41.78 4.20
332 363 3.984193 GATGCCACTGCGCTCCCTT 62.984 63.158 9.73 0.00 41.78 3.95
338 369 4.711949 CTGCGCTCCCTTGCCACT 62.712 66.667 9.73 0.00 0.00 4.00
339 370 3.315142 CTGCGCTCCCTTGCCACTA 62.315 63.158 9.73 0.00 0.00 2.74
340 371 2.512515 GCGCTCCCTTGCCACTAG 60.513 66.667 0.00 0.00 0.00 2.57
341 372 2.187946 CGCTCCCTTGCCACTAGG 59.812 66.667 0.00 0.00 38.23 3.02
365 396 7.605410 GCTACAGCCTAGTTCTCTATACTAG 57.395 44.000 0.00 0.00 42.97 2.57
366 397 7.163441 GCTACAGCCTAGTTCTCTATACTAGT 58.837 42.308 0.00 0.00 42.19 2.57
476 508 9.146984 ACAAAATTATTGTTGATTGAGCTGATG 57.853 29.630 0.00 0.00 0.00 3.07
485 517 0.614697 TTGAGCTGATGGAGGACCGA 60.615 55.000 0.00 0.00 39.42 4.69
486 518 0.397675 TGAGCTGATGGAGGACCGAT 60.398 55.000 0.00 0.00 39.42 4.18
510 542 1.728971 CGGTTGAACTTGAGCTGCTAG 59.271 52.381 0.15 0.00 0.00 3.42
549 611 0.892755 TCCCGTTTCAGTCTGCGTAT 59.107 50.000 0.00 0.00 0.00 3.06
598 660 1.548081 CATCCAACATGGCCAACTGA 58.452 50.000 10.96 2.52 37.47 3.41
638 702 4.795268 TCTCGTCACAAGTCATTGTCTAC 58.205 43.478 0.00 0.00 46.90 2.59
657 721 0.755686 CTGTCTCTCCATGGGTAGCC 59.244 60.000 13.02 3.29 0.00 3.93
658 722 0.339859 TGTCTCTCCATGGGTAGCCT 59.660 55.000 13.02 0.00 0.00 4.58
674 765 1.672356 CCTGCCGAGTCCTTTGTGG 60.672 63.158 0.00 0.00 37.10 4.17
870 1007 3.256383 CCTTCACCAAATCATCACAAGCA 59.744 43.478 0.00 0.00 0.00 3.91
891 1032 3.213206 AGACACTTGCATCTGTGGAAA 57.787 42.857 15.92 0.00 35.13 3.13
946 1089 1.399727 GCCTCGAACACCAACAATTCG 60.400 52.381 0.00 0.00 45.07 3.34
977 1124 0.324285 CTGCTTCTCCTTCACAGGCT 59.676 55.000 0.00 0.00 40.58 4.58
991 1139 0.615331 CAGGCTTCTAGCAACCCAGA 59.385 55.000 0.67 0.00 44.75 3.86
996 1144 2.354259 CTTCTAGCAACCCAGAAGCAG 58.646 52.381 0.00 0.00 40.83 4.24
1192 6085 1.192146 AGAGCCGGTCCAAAGCACTA 61.192 55.000 1.90 0.00 0.00 2.74
1363 10753 0.618968 AGGAGGTGAAGAAGCCGGAT 60.619 55.000 5.05 0.00 0.00 4.18
1365 10755 0.537188 GAGGTGAAGAAGCCGGATGA 59.463 55.000 5.05 0.00 0.00 2.92
1366 10756 0.984230 AGGTGAAGAAGCCGGATGAA 59.016 50.000 5.05 0.00 0.00 2.57
1367 10757 1.351017 AGGTGAAGAAGCCGGATGAAA 59.649 47.619 5.05 0.00 0.00 2.69
1529 15141 2.962859 TGTAGCTGCCAGAGATCCATA 58.037 47.619 0.00 0.00 0.00 2.74
1588 15206 8.858003 AAGGAAAAGAAAAGAAAAATCGAGAC 57.142 30.769 0.00 0.00 0.00 3.36
1596 15214 9.145865 AGAAAAGAAAAATCGAGACATACTCTC 57.854 33.333 0.00 0.00 42.92 3.20
1602 15220 9.176181 GAAAAATCGAGACATACTCTCATCTAC 57.824 37.037 0.00 0.00 45.43 2.59
1638 15256 4.082026 GCTTGGCTAATTTCCAGTGTGAAT 60.082 41.667 0.00 0.00 34.66 2.57
1662 15280 6.114221 TCAAAGCAAACGCTATGGTTATAC 57.886 37.500 1.35 0.00 39.40 1.47
1663 15281 5.878116 TCAAAGCAAACGCTATGGTTATACT 59.122 36.000 1.35 0.00 39.40 2.12
1664 15282 5.986004 AAGCAAACGCTATGGTTATACTC 57.014 39.130 0.00 0.00 39.40 2.59
1665 15283 4.377897 AGCAAACGCTATGGTTATACTCC 58.622 43.478 0.00 0.00 38.21 3.85
1666 15284 3.497262 GCAAACGCTATGGTTATACTCCC 59.503 47.826 0.00 0.00 0.00 4.30
1667 15285 4.742743 GCAAACGCTATGGTTATACTCCCT 60.743 45.833 0.00 0.00 0.00 4.20
1668 15286 4.868314 AACGCTATGGTTATACTCCCTC 57.132 45.455 0.00 0.00 0.00 4.30
1669 15287 3.163467 ACGCTATGGTTATACTCCCTCC 58.837 50.000 0.00 0.00 0.00 4.30
1670 15288 3.162666 CGCTATGGTTATACTCCCTCCA 58.837 50.000 0.00 0.00 0.00 3.86
1671 15289 3.769844 CGCTATGGTTATACTCCCTCCAT 59.230 47.826 0.00 0.00 41.10 3.41
1672 15290 4.223032 CGCTATGGTTATACTCCCTCCATT 59.777 45.833 0.00 0.00 39.28 3.16
1673 15291 5.624738 CGCTATGGTTATACTCCCTCCATTC 60.625 48.000 0.00 0.00 39.28 2.67
1674 15292 5.485708 GCTATGGTTATACTCCCTCCATTCT 59.514 44.000 0.00 0.00 39.28 2.40
1675 15293 6.668283 GCTATGGTTATACTCCCTCCATTCTA 59.332 42.308 0.00 0.00 39.28 2.10
1676 15294 6.936968 ATGGTTATACTCCCTCCATTCTAC 57.063 41.667 0.00 0.00 35.69 2.59
1677 15295 5.784023 TGGTTATACTCCCTCCATTCTACA 58.216 41.667 0.00 0.00 0.00 2.74
1678 15296 6.206787 TGGTTATACTCCCTCCATTCTACAA 58.793 40.000 0.00 0.00 0.00 2.41
1679 15297 6.849697 TGGTTATACTCCCTCCATTCTACAAT 59.150 38.462 0.00 0.00 0.00 2.71
1680 15298 7.162082 GGTTATACTCCCTCCATTCTACAATG 58.838 42.308 0.00 0.00 39.45 2.82
1681 15299 7.202102 GGTTATACTCCCTCCATTCTACAATGT 60.202 40.741 0.00 0.00 38.22 2.71
1682 15300 8.867097 GTTATACTCCCTCCATTCTACAATGTA 58.133 37.037 0.00 0.00 38.22 2.29
1683 15301 5.878406 ACTCCCTCCATTCTACAATGTAG 57.122 43.478 13.92 13.92 38.22 2.74
1684 15302 5.281314 ACTCCCTCCATTCTACAATGTAGT 58.719 41.667 18.71 0.00 38.22 2.73
1685 15303 5.129485 ACTCCCTCCATTCTACAATGTAGTG 59.871 44.000 18.71 11.26 38.22 2.74
1686 15304 4.130118 CCCTCCATTCTACAATGTAGTGC 58.870 47.826 18.71 0.00 38.22 4.40
1687 15305 4.130118 CCTCCATTCTACAATGTAGTGCC 58.870 47.826 18.71 0.00 38.22 5.01
1688 15306 4.141620 CCTCCATTCTACAATGTAGTGCCT 60.142 45.833 18.71 1.59 38.22 4.75
1689 15307 5.070446 CCTCCATTCTACAATGTAGTGCCTA 59.930 44.000 18.71 0.00 38.22 3.93
1690 15308 6.239714 CCTCCATTCTACAATGTAGTGCCTAT 60.240 42.308 18.71 5.07 38.22 2.57
1691 15309 7.039011 CCTCCATTCTACAATGTAGTGCCTATA 60.039 40.741 18.71 0.00 38.22 1.31
1692 15310 7.896811 TCCATTCTACAATGTAGTGCCTATAG 58.103 38.462 18.71 0.00 38.22 1.31
1693 15311 7.728532 TCCATTCTACAATGTAGTGCCTATAGA 59.271 37.037 18.71 5.36 38.22 1.98
1694 15312 8.535335 CCATTCTACAATGTAGTGCCTATAGAT 58.465 37.037 18.71 0.67 38.22 1.98
1695 15313 9.935241 CATTCTACAATGTAGTGCCTATAGATT 57.065 33.333 18.71 0.00 35.53 2.40
1700 15318 8.807948 ACAATGTAGTGCCTATAGATTTTTGT 57.192 30.769 0.00 0.00 0.00 2.83
1701 15319 9.899661 ACAATGTAGTGCCTATAGATTTTTGTA 57.100 29.630 0.00 0.00 0.00 2.41
1708 15326 9.515226 AGTGCCTATAGATTTTTGTAAAAGTCA 57.485 29.630 12.93 2.88 37.17 3.41
1727 15345 8.926715 AAAGTCAAACTTTATCAACTTTGACC 57.073 30.769 15.18 2.61 45.75 4.02
1728 15346 8.527810 AAAGTCAAACTTTATCAACTTTGACCA 58.472 29.630 15.18 0.00 45.75 4.02
1730 15348 8.340230 GTCAAACTTTATCAACTTTGACCAAG 57.660 34.615 9.86 9.16 43.35 3.61
1732 15350 9.179909 TCAAACTTTATCAACTTTGACCAAGTA 57.820 29.630 14.02 2.21 45.77 2.24
1733 15351 9.965824 CAAACTTTATCAACTTTGACCAAGTAT 57.034 29.630 14.02 6.25 45.77 2.12
1773 15391 9.811995 TCTACATCTACAATACCAAACATGTAC 57.188 33.333 0.00 0.00 0.00 2.90
1774 15392 9.594478 CTACATCTACAATACCAAACATGTACA 57.406 33.333 0.00 0.00 0.00 2.90
1776 15394 9.461312 ACATCTACAATACCAAACATGTACATT 57.539 29.630 5.37 0.00 0.00 2.71
1777 15395 9.935682 CATCTACAATACCAAACATGTACATTC 57.064 33.333 5.37 0.00 0.00 2.67
1778 15396 9.905713 ATCTACAATACCAAACATGTACATTCT 57.094 29.630 5.37 0.00 0.00 2.40
1779 15397 9.161629 TCTACAATACCAAACATGTACATTCTG 57.838 33.333 5.37 0.00 0.00 3.02
1780 15398 7.994425 ACAATACCAAACATGTACATTCTGA 57.006 32.000 5.37 0.00 0.00 3.27
1781 15399 8.402798 ACAATACCAAACATGTACATTCTGAA 57.597 30.769 5.37 0.00 0.00 3.02
1782 15400 8.855110 ACAATACCAAACATGTACATTCTGAAA 58.145 29.630 5.37 0.00 0.00 2.69
1783 15401 9.689976 CAATACCAAACATGTACATTCTGAAAA 57.310 29.630 5.37 0.00 0.00 2.29
1810 15428 8.853077 ATAATTCACGATGTATCCAATGATGT 57.147 30.769 0.00 0.00 32.18 3.06
1811 15429 5.989551 TTCACGATGTATCCAATGATGTG 57.010 39.130 0.00 0.00 32.18 3.21
1812 15430 3.809279 TCACGATGTATCCAATGATGTGC 59.191 43.478 0.00 0.00 32.18 4.57
1813 15431 3.560896 CACGATGTATCCAATGATGTGCA 59.439 43.478 0.00 0.00 32.18 4.57
1814 15432 4.214758 CACGATGTATCCAATGATGTGCAT 59.785 41.667 0.00 0.00 39.43 3.96
1816 15434 5.300034 ACGATGTATCCAATGATGTGCATTT 59.700 36.000 0.00 0.00 44.68 2.32
1817 15435 5.627780 CGATGTATCCAATGATGTGCATTTG 59.372 40.000 0.00 0.00 44.68 2.32
1818 15436 6.513720 CGATGTATCCAATGATGTGCATTTGA 60.514 38.462 0.00 0.00 44.68 2.69
1819 15437 6.718522 TGTATCCAATGATGTGCATTTGAT 57.281 33.333 0.00 0.00 44.68 2.57
1820 15438 7.820578 TGTATCCAATGATGTGCATTTGATA 57.179 32.000 0.00 0.00 44.68 2.15
1821 15439 8.411991 TGTATCCAATGATGTGCATTTGATAT 57.588 30.769 12.30 0.00 45.57 1.63
1822 15440 8.862085 TGTATCCAATGATGTGCATTTGATATT 58.138 29.630 12.30 0.00 45.57 1.28
1823 15441 9.350357 GTATCCAATGATGTGCATTTGATATTC 57.650 33.333 12.30 2.13 45.57 1.75
1824 15442 7.591421 TCCAATGATGTGCATTTGATATTCT 57.409 32.000 0.00 0.00 44.68 2.40
1825 15443 8.694581 TCCAATGATGTGCATTTGATATTCTA 57.305 30.769 0.00 0.00 44.68 2.10
1826 15444 8.789762 TCCAATGATGTGCATTTGATATTCTAG 58.210 33.333 0.00 0.00 44.68 2.43
1827 15445 8.789762 CCAATGATGTGCATTTGATATTCTAGA 58.210 33.333 0.00 0.00 44.68 2.43
1830 15448 8.913487 TGATGTGCATTTGATATTCTAGATGT 57.087 30.769 0.00 0.00 0.00 3.06
1833 15451 8.607441 TGTGCATTTGATATTCTAGATGTACC 57.393 34.615 0.00 0.00 31.81 3.34
1834 15452 8.432013 TGTGCATTTGATATTCTAGATGTACCT 58.568 33.333 0.00 0.00 31.81 3.08
1835 15453 9.929180 GTGCATTTGATATTCTAGATGTACCTA 57.071 33.333 0.00 0.00 0.00 3.08
1836 15454 9.929180 TGCATTTGATATTCTAGATGTACCTAC 57.071 33.333 0.00 0.00 0.00 3.18
1875 15493 9.705290 ATATGGTTAAAGTTTGGAATGTTTGAC 57.295 29.630 0.00 0.00 0.00 3.18
1876 15494 7.176589 TGGTTAAAGTTTGGAATGTTTGACT 57.823 32.000 0.00 0.00 0.00 3.41
1877 15495 7.616313 TGGTTAAAGTTTGGAATGTTTGACTT 58.384 30.769 0.00 0.00 0.00 3.01
1878 15496 7.547370 TGGTTAAAGTTTGGAATGTTTGACTTG 59.453 33.333 0.00 0.00 0.00 3.16
1879 15497 7.547722 GGTTAAAGTTTGGAATGTTTGACTTGT 59.452 33.333 0.00 0.00 0.00 3.16
1880 15498 6.966435 AAAGTTTGGAATGTTTGACTTGTG 57.034 33.333 0.00 0.00 0.00 3.33
1881 15499 4.432712 AGTTTGGAATGTTTGACTTGTGC 58.567 39.130 0.00 0.00 0.00 4.57
1882 15500 4.081752 AGTTTGGAATGTTTGACTTGTGCA 60.082 37.500 0.00 0.00 0.00 4.57
1883 15501 4.462508 TTGGAATGTTTGACTTGTGCAA 57.537 36.364 0.00 0.00 0.00 4.08
1884 15502 4.462508 TGGAATGTTTGACTTGTGCAAA 57.537 36.364 0.00 0.00 33.22 3.68
1885 15503 4.825422 TGGAATGTTTGACTTGTGCAAAA 58.175 34.783 0.00 0.00 37.03 2.44
1886 15504 5.240891 TGGAATGTTTGACTTGTGCAAAAA 58.759 33.333 0.00 0.00 37.03 1.94
1887 15505 5.879223 TGGAATGTTTGACTTGTGCAAAAAT 59.121 32.000 0.00 0.00 37.03 1.82
1888 15506 6.036953 TGGAATGTTTGACTTGTGCAAAAATC 59.963 34.615 0.00 0.00 37.03 2.17
1889 15507 6.258507 GGAATGTTTGACTTGTGCAAAAATCT 59.741 34.615 0.00 0.00 37.03 2.40
1890 15508 7.437862 GGAATGTTTGACTTGTGCAAAAATCTA 59.562 33.333 0.00 0.00 37.03 1.98
1891 15509 8.891671 AATGTTTGACTTGTGCAAAAATCTAT 57.108 26.923 0.00 0.00 37.03 1.98
1892 15510 9.979578 AATGTTTGACTTGTGCAAAAATCTATA 57.020 25.926 0.00 0.00 37.03 1.31
1893 15511 9.979578 ATGTTTGACTTGTGCAAAAATCTATAA 57.020 25.926 0.00 0.00 37.03 0.98
1894 15512 9.462174 TGTTTGACTTGTGCAAAAATCTATAAG 57.538 29.630 0.00 0.00 37.03 1.73
1895 15513 8.427774 GTTTGACTTGTGCAAAAATCTATAAGC 58.572 33.333 0.00 0.00 37.03 3.09
1896 15514 7.213216 TGACTTGTGCAAAAATCTATAAGCA 57.787 32.000 0.00 0.00 0.00 3.91
1913 15531 9.470399 TCTATAAGCACTATATTATGGAACGGA 57.530 33.333 0.00 0.00 29.27 4.69
1914 15532 9.737427 CTATAAGCACTATATTATGGAACGGAG 57.263 37.037 0.00 0.00 0.00 4.63
1915 15533 5.407407 AGCACTATATTATGGAACGGAGG 57.593 43.478 0.00 0.00 0.00 4.30
1916 15534 4.223032 AGCACTATATTATGGAACGGAGGG 59.777 45.833 0.00 0.00 0.00 4.30
1917 15535 4.222145 GCACTATATTATGGAACGGAGGGA 59.778 45.833 0.00 0.00 0.00 4.20
1918 15536 5.624738 GCACTATATTATGGAACGGAGGGAG 60.625 48.000 0.00 0.00 0.00 4.30
1999 15621 0.534877 TGCGTCAAACAGGACAGCAT 60.535 50.000 0.00 0.00 40.04 3.79
2000 15622 0.166814 GCGTCAAACAGGACAGCATC 59.833 55.000 0.00 0.00 37.66 3.91
2042 15664 5.506686 AAAAAGAGAAAGAACAGGACAGC 57.493 39.130 0.00 0.00 0.00 4.40
2043 15665 3.845781 AAGAGAAAGAACAGGACAGCA 57.154 42.857 0.00 0.00 0.00 4.41
2044 15666 3.118905 AGAGAAAGAACAGGACAGCAC 57.881 47.619 0.00 0.00 0.00 4.40
2146 15770 5.046376 ACGCATGTCCTCCAATCATATGATA 60.046 40.000 18.47 2.67 33.73 2.15
2149 15773 5.426689 TGTCCTCCAATCATATGATAGGC 57.573 43.478 21.30 17.49 33.73 3.93
2180 15804 6.120378 TCGAGTTGATCCATATATAGACGC 57.880 41.667 0.00 0.00 0.00 5.19
2181 15805 4.964555 CGAGTTGATCCATATATAGACGCG 59.035 45.833 3.53 3.53 0.00 6.01
2182 15806 4.673441 AGTTGATCCATATATAGACGCGC 58.327 43.478 5.73 0.00 0.00 6.86
2183 15807 3.710326 TGATCCATATATAGACGCGCC 57.290 47.619 5.73 0.00 0.00 6.53
2184 15808 2.361119 TGATCCATATATAGACGCGCCC 59.639 50.000 5.73 0.00 0.00 6.13
2185 15809 2.139323 TCCATATATAGACGCGCCCT 57.861 50.000 5.73 6.41 0.00 5.19
2186 15810 3.286329 TCCATATATAGACGCGCCCTA 57.714 47.619 5.73 8.83 0.00 3.53
2187 15811 3.623703 TCCATATATAGACGCGCCCTAA 58.376 45.455 5.73 0.20 0.00 2.69
2188 15812 4.212716 TCCATATATAGACGCGCCCTAAT 58.787 43.478 5.73 7.37 0.00 1.73
2189 15813 4.277672 TCCATATATAGACGCGCCCTAATC 59.722 45.833 5.73 0.00 0.00 1.75
2190 15814 4.547532 CATATATAGACGCGCCCTAATCC 58.452 47.826 5.73 0.00 0.00 3.01
2191 15815 1.180029 TATAGACGCGCCCTAATCCC 58.820 55.000 5.73 0.00 0.00 3.85
2192 15816 0.830444 ATAGACGCGCCCTAATCCCA 60.830 55.000 5.73 0.00 0.00 4.37
2193 15817 1.741327 TAGACGCGCCCTAATCCCAC 61.741 60.000 5.73 0.00 0.00 4.61
2194 15818 4.171103 ACGCGCCCTAATCCCACC 62.171 66.667 5.73 0.00 0.00 4.61
2197 15821 4.929707 CGCCCTAATCCCACCGCC 62.930 72.222 0.00 0.00 0.00 6.13
2198 15822 4.929707 GCCCTAATCCCACCGCCG 62.930 72.222 0.00 0.00 0.00 6.46
2199 15823 4.929707 CCCTAATCCCACCGCCGC 62.930 72.222 0.00 0.00 0.00 6.53
2200 15824 4.929707 CCTAATCCCACCGCCGCC 62.930 72.222 0.00 0.00 0.00 6.13
2201 15825 4.169696 CTAATCCCACCGCCGCCA 62.170 66.667 0.00 0.00 0.00 5.69
2202 15826 3.690685 CTAATCCCACCGCCGCCAA 62.691 63.158 0.00 0.00 0.00 4.52
2203 15827 3.690685 TAATCCCACCGCCGCCAAG 62.691 63.158 0.00 0.00 0.00 3.61
2215 15839 2.042261 GCCAAGTCCCCCTCCCTA 59.958 66.667 0.00 0.00 0.00 3.53
2216 15840 2.376165 GCCAAGTCCCCCTCCCTAC 61.376 68.421 0.00 0.00 0.00 3.18
2217 15841 1.396594 CCAAGTCCCCCTCCCTACT 59.603 63.158 0.00 0.00 0.00 2.57
2218 15842 0.691413 CCAAGTCCCCCTCCCTACTC 60.691 65.000 0.00 0.00 0.00 2.59
2219 15843 0.340208 CAAGTCCCCCTCCCTACTCT 59.660 60.000 0.00 0.00 0.00 3.24
2220 15844 0.637743 AAGTCCCCCTCCCTACTCTC 59.362 60.000 0.00 0.00 0.00 3.20
2221 15845 1.233659 GTCCCCCTCCCTACTCTCC 59.766 68.421 0.00 0.00 0.00 3.71
2222 15846 1.088896 TCCCCCTCCCTACTCTCCT 59.911 63.158 0.00 0.00 0.00 3.69
2223 15847 1.000041 TCCCCCTCCCTACTCTCCTC 61.000 65.000 0.00 0.00 0.00 3.71
2224 15848 1.544703 CCCCTCCCTACTCTCCTCC 59.455 68.421 0.00 0.00 0.00 4.30
2225 15849 1.002242 CCCCTCCCTACTCTCCTCCT 61.002 65.000 0.00 0.00 0.00 3.69
2226 15850 0.481128 CCCTCCCTACTCTCCTCCTC 59.519 65.000 0.00 0.00 0.00 3.71
2227 15851 0.481128 CCTCCCTACTCTCCTCCTCC 59.519 65.000 0.00 0.00 0.00 4.30
2228 15852 0.481128 CTCCCTACTCTCCTCCTCCC 59.519 65.000 0.00 0.00 0.00 4.30
2229 15853 0.048117 TCCCTACTCTCCTCCTCCCT 59.952 60.000 0.00 0.00 0.00 4.20
2230 15854 0.481128 CCCTACTCTCCTCCTCCCTC 59.519 65.000 0.00 0.00 0.00 4.30
2231 15855 0.109723 CCTACTCTCCTCCTCCCTCG 59.890 65.000 0.00 0.00 0.00 4.63
2232 15856 0.536460 CTACTCTCCTCCTCCCTCGC 60.536 65.000 0.00 0.00 0.00 5.03
2233 15857 1.997256 TACTCTCCTCCTCCCTCGCC 61.997 65.000 0.00 0.00 0.00 5.54
2234 15858 4.507916 TCTCCTCCTCCCTCGCCG 62.508 72.222 0.00 0.00 0.00 6.46
2297 15921 2.590575 CGGCGGCGGGTATTGATT 60.591 61.111 25.36 0.00 0.00 2.57
2298 15922 2.892334 CGGCGGCGGGTATTGATTG 61.892 63.158 25.36 0.00 0.00 2.67
2299 15923 1.822186 GGCGGCGGGTATTGATTGT 60.822 57.895 9.78 0.00 0.00 2.71
2300 15924 1.647084 GCGGCGGGTATTGATTGTC 59.353 57.895 9.78 0.00 0.00 3.18
2301 15925 1.782028 GCGGCGGGTATTGATTGTCC 61.782 60.000 9.78 0.00 0.00 4.02
2302 15926 1.164041 CGGCGGGTATTGATTGTCCC 61.164 60.000 0.00 0.00 36.82 4.46
2303 15927 0.822121 GGCGGGTATTGATTGTCCCC 60.822 60.000 0.00 0.00 36.84 4.81
2304 15928 0.182775 GCGGGTATTGATTGTCCCCT 59.817 55.000 0.00 0.00 36.84 4.79
2305 15929 1.409661 GCGGGTATTGATTGTCCCCTT 60.410 52.381 0.00 0.00 36.84 3.95
2306 15930 2.297701 CGGGTATTGATTGTCCCCTTG 58.702 52.381 0.00 0.00 36.84 3.61
2307 15931 2.031870 GGGTATTGATTGTCCCCTTGC 58.968 52.381 0.00 0.00 34.32 4.01
2308 15932 1.676006 GGTATTGATTGTCCCCTTGCG 59.324 52.381 0.00 0.00 0.00 4.85
2309 15933 1.065551 GTATTGATTGTCCCCTTGCGC 59.934 52.381 0.00 0.00 0.00 6.09
2310 15934 0.611618 ATTGATTGTCCCCTTGCGCA 60.612 50.000 5.66 5.66 0.00 6.09
2311 15935 0.825425 TTGATTGTCCCCTTGCGCAA 60.825 50.000 23.48 23.48 0.00 4.85
2312 15936 0.825425 TGATTGTCCCCTTGCGCAAA 60.825 50.000 25.01 7.66 0.00 3.68
2313 15937 0.109132 GATTGTCCCCTTGCGCAAAG 60.109 55.000 25.01 18.39 35.47 2.77
2320 15944 4.729856 CTTGCGCAAAGGGCTGGC 62.730 66.667 25.01 0.00 42.10 4.85
2333 15957 4.421479 CTGGCGCGAGTCGGTTCT 62.421 66.667 12.10 0.00 39.79 3.01
2334 15958 3.916392 CTGGCGCGAGTCGGTTCTT 62.916 63.158 12.10 0.00 39.79 2.52
2335 15959 3.179939 GGCGCGAGTCGGTTCTTC 61.180 66.667 12.10 0.00 38.94 2.87
2336 15960 3.533691 GCGCGAGTCGGTTCTTCG 61.534 66.667 12.10 9.08 38.94 3.79
2337 15961 2.874780 CGCGAGTCGGTTCTTCGG 60.875 66.667 15.52 0.00 33.78 4.30
2338 15962 2.506438 GCGAGTCGGTTCTTCGGG 60.506 66.667 15.52 0.00 0.00 5.14
2339 15963 2.960170 CGAGTCGGTTCTTCGGGT 59.040 61.111 4.10 0.00 0.00 5.28
2340 15964 1.443872 CGAGTCGGTTCTTCGGGTG 60.444 63.158 4.10 0.00 0.00 4.61
2341 15965 1.859427 CGAGTCGGTTCTTCGGGTGA 61.859 60.000 4.10 0.00 0.00 4.02
2342 15966 0.109226 GAGTCGGTTCTTCGGGTGAG 60.109 60.000 0.00 0.00 0.00 3.51
2343 15967 1.080025 GTCGGTTCTTCGGGTGAGG 60.080 63.158 0.00 0.00 0.00 3.86
2344 15968 2.264794 CGGTTCTTCGGGTGAGGG 59.735 66.667 0.00 0.00 0.00 4.30
2345 15969 2.046217 GGTTCTTCGGGTGAGGGC 60.046 66.667 0.00 0.00 0.00 5.19
2346 15970 2.593956 GGTTCTTCGGGTGAGGGCT 61.594 63.158 0.00 0.00 0.00 5.19
2347 15971 1.375326 GTTCTTCGGGTGAGGGCTT 59.625 57.895 0.00 0.00 0.00 4.35
2348 15972 0.955919 GTTCTTCGGGTGAGGGCTTG 60.956 60.000 0.00 0.00 0.00 4.01
2349 15973 1.125093 TTCTTCGGGTGAGGGCTTGA 61.125 55.000 0.00 0.00 0.00 3.02
2350 15974 0.909610 TCTTCGGGTGAGGGCTTGAT 60.910 55.000 0.00 0.00 0.00 2.57
2351 15975 0.745845 CTTCGGGTGAGGGCTTGATG 60.746 60.000 0.00 0.00 0.00 3.07
2352 15976 2.819984 TTCGGGTGAGGGCTTGATGC 62.820 60.000 0.00 0.00 41.94 3.91
2353 15977 2.679716 GGGTGAGGGCTTGATGCT 59.320 61.111 0.00 0.00 42.39 3.79
2354 15978 1.751927 GGGTGAGGGCTTGATGCTG 60.752 63.158 0.00 0.00 42.39 4.41
2355 15979 2.413142 GGTGAGGGCTTGATGCTGC 61.413 63.158 0.00 0.00 42.39 5.25
2356 15980 1.378250 GTGAGGGCTTGATGCTGCT 60.378 57.895 0.00 0.00 42.39 4.24
2357 15981 1.378119 TGAGGGCTTGATGCTGCTG 60.378 57.895 0.00 0.00 42.39 4.41
2358 15982 2.044252 AGGGCTTGATGCTGCTGG 60.044 61.111 0.00 0.00 42.39 4.85
2359 15983 3.145551 GGGCTTGATGCTGCTGGG 61.146 66.667 0.00 0.00 42.39 4.45
2360 15984 2.362120 GGCTTGATGCTGCTGGGT 60.362 61.111 0.00 0.00 42.39 4.51
2361 15985 2.707849 GGCTTGATGCTGCTGGGTG 61.708 63.158 0.00 0.00 42.39 4.61
2362 15986 1.975407 GCTTGATGCTGCTGGGTGT 60.975 57.895 0.00 0.00 38.95 4.16
2363 15987 1.930908 GCTTGATGCTGCTGGGTGTC 61.931 60.000 0.00 0.00 38.95 3.67
2364 15988 0.607217 CTTGATGCTGCTGGGTGTCA 60.607 55.000 0.00 0.00 0.00 3.58
2365 15989 0.607217 TTGATGCTGCTGGGTGTCAG 60.607 55.000 0.00 0.00 46.03 3.51
2366 15990 1.748122 GATGCTGCTGGGTGTCAGG 60.748 63.158 0.00 0.00 43.54 3.86
2367 15991 3.278072 ATGCTGCTGGGTGTCAGGG 62.278 63.158 0.00 0.00 43.54 4.45
2368 15992 3.958860 GCTGCTGGGTGTCAGGGT 61.959 66.667 0.00 0.00 43.54 4.34
2369 15993 2.033141 CTGCTGGGTGTCAGGGTG 59.967 66.667 0.00 0.00 43.54 4.61
2370 15994 2.772191 TGCTGGGTGTCAGGGTGT 60.772 61.111 0.00 0.00 43.54 4.16
2371 15995 2.281761 GCTGGGTGTCAGGGTGTG 60.282 66.667 0.00 0.00 43.54 3.82
2372 15996 3.120086 GCTGGGTGTCAGGGTGTGT 62.120 63.158 0.00 0.00 43.54 3.72
2373 15997 1.531748 CTGGGTGTCAGGGTGTGTT 59.468 57.895 0.00 0.00 39.76 3.32
2374 15998 0.535102 CTGGGTGTCAGGGTGTGTTC 60.535 60.000 0.00 0.00 39.76 3.18
2375 15999 1.597027 GGGTGTCAGGGTGTGTTCG 60.597 63.158 0.00 0.00 0.00 3.95
2376 16000 1.145377 GGTGTCAGGGTGTGTTCGT 59.855 57.895 0.00 0.00 0.00 3.85
2377 16001 0.878961 GGTGTCAGGGTGTGTTCGTC 60.879 60.000 0.00 0.00 0.00 4.20
2378 16002 0.878961 GTGTCAGGGTGTGTTCGTCC 60.879 60.000 0.00 0.00 0.00 4.79
2379 16003 1.663702 GTCAGGGTGTGTTCGTCCG 60.664 63.158 0.00 0.00 0.00 4.79
2380 16004 3.041940 CAGGGTGTGTTCGTCCGC 61.042 66.667 0.00 0.00 0.00 5.54
2381 16005 4.309950 AGGGTGTGTTCGTCCGCC 62.310 66.667 0.00 0.00 0.00 6.13
2402 16026 3.029735 GCTTTGCGTTTGGTGCGG 61.030 61.111 0.00 0.00 34.24 5.69
2403 16027 3.029735 CTTTGCGTTTGGTGCGGC 61.030 61.111 0.00 0.00 34.24 6.53
2404 16028 4.914420 TTTGCGTTTGGTGCGGCG 62.914 61.111 0.51 0.51 34.24 6.46
2409 16033 2.746277 GTTTGGTGCGGCGGAGAT 60.746 61.111 9.78 0.00 0.00 2.75
2410 16034 2.745884 TTTGGTGCGGCGGAGATG 60.746 61.111 9.78 0.00 0.00 2.90
2420 16044 4.812476 CGGAGATGCGGCGGACAA 62.812 66.667 9.78 0.00 0.00 3.18
2421 16045 2.435938 GGAGATGCGGCGGACAAA 60.436 61.111 9.78 0.00 0.00 2.83
2422 16046 2.038269 GGAGATGCGGCGGACAAAA 61.038 57.895 9.78 0.00 0.00 2.44
2423 16047 1.376609 GGAGATGCGGCGGACAAAAT 61.377 55.000 9.78 0.00 0.00 1.82
2424 16048 0.248215 GAGATGCGGCGGACAAAATG 60.248 55.000 9.78 0.00 0.00 2.32
2425 16049 1.226660 GATGCGGCGGACAAAATGG 60.227 57.895 9.78 0.00 0.00 3.16
2426 16050 3.355203 ATGCGGCGGACAAAATGGC 62.355 57.895 9.78 0.00 0.00 4.40
2427 16051 3.747976 GCGGCGGACAAAATGGCT 61.748 61.111 9.78 0.00 0.00 4.75
2428 16052 2.961768 CGGCGGACAAAATGGCTT 59.038 55.556 0.00 0.00 0.00 4.35
2429 16053 1.444212 CGGCGGACAAAATGGCTTG 60.444 57.895 0.00 0.00 0.00 4.01
2430 16054 1.861542 CGGCGGACAAAATGGCTTGA 61.862 55.000 0.00 0.00 0.00 3.02
2431 16055 0.109132 GGCGGACAAAATGGCTTGAG 60.109 55.000 0.00 0.00 0.00 3.02
2432 16056 0.109132 GCGGACAAAATGGCTTGAGG 60.109 55.000 0.00 0.00 0.00 3.86
2433 16057 0.109132 CGGACAAAATGGCTTGAGGC 60.109 55.000 0.00 0.00 41.50 4.70
2434 16058 1.260544 GGACAAAATGGCTTGAGGCT 58.739 50.000 6.13 0.00 41.69 4.58
2435 16059 1.067354 GGACAAAATGGCTTGAGGCTG 60.067 52.381 6.13 0.00 41.69 4.85
2436 16060 0.971386 ACAAAATGGCTTGAGGCTGG 59.029 50.000 6.13 0.00 41.69 4.85
2437 16061 1.259609 CAAAATGGCTTGAGGCTGGA 58.740 50.000 6.13 0.00 41.69 3.86
2438 16062 1.203994 CAAAATGGCTTGAGGCTGGAG 59.796 52.381 6.13 0.00 41.69 3.86
2439 16063 0.969409 AAATGGCTTGAGGCTGGAGC 60.969 55.000 9.58 9.58 41.69 4.70
2450 16074 4.087892 CTGGAGCCCGGTGGAGTG 62.088 72.222 0.00 0.00 0.00 3.51
2456 16080 4.838152 CCCGGTGGAGTGGCGATG 62.838 72.222 0.00 0.00 0.00 3.84
2457 16081 4.082523 CCGGTGGAGTGGCGATGT 62.083 66.667 0.00 0.00 0.00 3.06
2458 16082 2.815211 CGGTGGAGTGGCGATGTG 60.815 66.667 0.00 0.00 0.00 3.21
2459 16083 2.436646 GGTGGAGTGGCGATGTGG 60.437 66.667 0.00 0.00 0.00 4.17
2460 16084 2.347490 GTGGAGTGGCGATGTGGT 59.653 61.111 0.00 0.00 0.00 4.16
2461 16085 2.034879 GTGGAGTGGCGATGTGGTG 61.035 63.158 0.00 0.00 0.00 4.17
2462 16086 2.436646 GGAGTGGCGATGTGGTGG 60.437 66.667 0.00 0.00 0.00 4.61
2463 16087 2.347490 GAGTGGCGATGTGGTGGT 59.653 61.111 0.00 0.00 0.00 4.16
2464 16088 2.032528 AGTGGCGATGTGGTGGTG 59.967 61.111 0.00 0.00 0.00 4.17
2465 16089 3.055719 GTGGCGATGTGGTGGTGG 61.056 66.667 0.00 0.00 0.00 4.61
2466 16090 3.565214 TGGCGATGTGGTGGTGGT 61.565 61.111 0.00 0.00 0.00 4.16
2467 16091 3.055719 GGCGATGTGGTGGTGGTG 61.056 66.667 0.00 0.00 0.00 4.17
2468 16092 3.055719 GCGATGTGGTGGTGGTGG 61.056 66.667 0.00 0.00 0.00 4.61
2469 16093 2.359850 CGATGTGGTGGTGGTGGG 60.360 66.667 0.00 0.00 0.00 4.61
2470 16094 2.035626 GATGTGGTGGTGGTGGGG 59.964 66.667 0.00 0.00 0.00 4.96
2471 16095 4.299796 ATGTGGTGGTGGTGGGGC 62.300 66.667 0.00 0.00 0.00 5.80
2495 16119 4.899239 GGCAGCCGGTCGATCTGG 62.899 72.222 1.90 8.11 45.06 3.86
2502 16126 4.899239 GGTCGATCTGGCGCCAGG 62.899 72.222 46.58 33.93 43.75 4.45
2506 16130 4.925861 GATCTGGCGCCAGGCTCC 62.926 72.222 46.58 30.95 43.75 4.70
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
6 7 5.428184 ACCTCTTCTTACCTCATGAAAGG 57.572 43.478 0.00 0.00 42.55 3.11
8 9 7.883311 CCTTTTACCTCTTCTTACCTCATGAAA 59.117 37.037 0.00 0.00 0.00 2.69
28 30 7.012515 TGAGCAGTTTTAACACGATTCCTTTTA 59.987 33.333 0.00 0.00 0.00 1.52
32 34 4.385825 TGAGCAGTTTTAACACGATTCCT 58.614 39.130 0.00 0.00 0.00 3.36
35 37 4.475944 GCATGAGCAGTTTTAACACGATT 58.524 39.130 0.00 0.00 41.58 3.34
36 38 4.083581 GCATGAGCAGTTTTAACACGAT 57.916 40.909 0.00 0.00 41.58 3.73
54 56 2.548707 CCTATGTAGACCGCACATGCAT 60.549 50.000 4.49 0.00 42.21 3.96
102 133 9.027202 TCTTGTAGTATAACACATAGGAACACA 57.973 33.333 0.00 0.00 0.00 3.72
198 229 5.305128 TGCCCATGAGTTTCATCTTCTTTTT 59.695 36.000 0.00 0.00 34.28 1.94
199 230 4.834496 TGCCCATGAGTTTCATCTTCTTTT 59.166 37.500 0.00 0.00 34.28 2.27
200 231 4.219288 GTGCCCATGAGTTTCATCTTCTTT 59.781 41.667 0.00 0.00 34.28 2.52
201 232 3.760684 GTGCCCATGAGTTTCATCTTCTT 59.239 43.478 0.00 0.00 34.28 2.52
202 233 3.009916 AGTGCCCATGAGTTTCATCTTCT 59.990 43.478 0.00 0.00 34.28 2.85
203 234 3.350833 AGTGCCCATGAGTTTCATCTTC 58.649 45.455 0.00 0.00 34.28 2.87
204 235 3.446442 AGTGCCCATGAGTTTCATCTT 57.554 42.857 0.00 0.00 34.28 2.40
205 236 3.683847 GCTAGTGCCCATGAGTTTCATCT 60.684 47.826 0.00 0.00 34.28 2.90
206 237 2.615912 GCTAGTGCCCATGAGTTTCATC 59.384 50.000 0.00 0.00 34.28 2.92
207 238 2.025981 TGCTAGTGCCCATGAGTTTCAT 60.026 45.455 0.00 0.00 36.49 2.57
208 239 1.350684 TGCTAGTGCCCATGAGTTTCA 59.649 47.619 0.00 0.00 38.71 2.69
209 240 1.740025 GTGCTAGTGCCCATGAGTTTC 59.260 52.381 0.00 0.00 38.71 2.78
210 241 1.614317 GGTGCTAGTGCCCATGAGTTT 60.614 52.381 0.00 0.00 38.71 2.66
211 242 0.035056 GGTGCTAGTGCCCATGAGTT 60.035 55.000 0.00 0.00 38.71 3.01
212 243 1.604378 GGTGCTAGTGCCCATGAGT 59.396 57.895 0.00 0.00 38.71 3.41
213 244 1.153086 GGGTGCTAGTGCCCATGAG 60.153 63.158 15.91 0.00 44.23 2.90
214 245 2.998097 GGGTGCTAGTGCCCATGA 59.002 61.111 15.91 0.00 44.23 3.07
218 249 2.124151 CCATGGGTGCTAGTGCCC 60.124 66.667 2.85 14.48 45.04 5.36
219 250 0.611896 AAACCATGGGTGCTAGTGCC 60.612 55.000 18.09 0.00 35.34 5.01
220 251 2.122783 TAAACCATGGGTGCTAGTGC 57.877 50.000 18.09 0.00 35.34 4.40
221 252 4.269183 TCAATAAACCATGGGTGCTAGTG 58.731 43.478 18.09 9.64 35.34 2.74
222 253 4.584638 TCAATAAACCATGGGTGCTAGT 57.415 40.909 18.09 0.00 35.34 2.57
223 254 7.554118 CCTATATCAATAAACCATGGGTGCTAG 59.446 40.741 18.09 1.14 35.34 3.42
224 255 7.238723 TCCTATATCAATAAACCATGGGTGCTA 59.761 37.037 18.09 0.00 35.34 3.49
225 256 6.045459 TCCTATATCAATAAACCATGGGTGCT 59.955 38.462 18.09 0.00 35.34 4.40
226 257 6.245408 TCCTATATCAATAAACCATGGGTGC 58.755 40.000 18.09 0.00 35.34 5.01
227 258 7.689299 TCTCCTATATCAATAAACCATGGGTG 58.311 38.462 18.09 6.03 35.34 4.61
228 259 7.888514 TCTCCTATATCAATAAACCATGGGT 57.111 36.000 18.09 6.57 37.65 4.51
229 260 7.337942 GCTTCTCCTATATCAATAAACCATGGG 59.662 40.741 18.09 0.00 0.00 4.00
230 261 7.884877 TGCTTCTCCTATATCAATAAACCATGG 59.115 37.037 11.19 11.19 0.00 3.66
231 262 8.853077 TGCTTCTCCTATATCAATAAACCATG 57.147 34.615 0.00 0.00 0.00 3.66
232 263 9.678260 GATGCTTCTCCTATATCAATAAACCAT 57.322 33.333 0.00 0.00 0.00 3.55
233 264 8.103305 GGATGCTTCTCCTATATCAATAAACCA 58.897 37.037 0.00 0.00 32.18 3.67
234 265 7.554476 GGGATGCTTCTCCTATATCAATAAACC 59.446 40.741 0.00 0.00 35.50 3.27
235 266 8.325046 AGGGATGCTTCTCCTATATCAATAAAC 58.675 37.037 7.56 0.00 35.50 2.01
236 267 8.454859 AGGGATGCTTCTCCTATATCAATAAA 57.545 34.615 7.56 0.00 35.50 1.40
238 269 7.459125 ACAAGGGATGCTTCTCCTATATCAATA 59.541 37.037 9.18 0.00 35.50 1.90
240 271 5.608437 ACAAGGGATGCTTCTCCTATATCAA 59.392 40.000 9.18 0.00 35.50 2.57
248 279 3.914426 TCTTACAAGGGATGCTTCTCC 57.086 47.619 0.00 0.00 34.31 3.71
250 281 4.202567 TGGTTTCTTACAAGGGATGCTTCT 60.203 41.667 0.00 0.00 0.00 2.85
253 284 3.330701 TCTGGTTTCTTACAAGGGATGCT 59.669 43.478 0.00 0.00 0.00 3.79
254 285 3.686016 TCTGGTTTCTTACAAGGGATGC 58.314 45.455 0.00 0.00 0.00 3.91
256 287 6.151144 CGAATTTCTGGTTTCTTACAAGGGAT 59.849 38.462 0.00 0.00 0.00 3.85
257 288 5.472137 CGAATTTCTGGTTTCTTACAAGGGA 59.528 40.000 0.00 0.00 0.00 4.20
258 289 5.240844 ACGAATTTCTGGTTTCTTACAAGGG 59.759 40.000 0.00 0.00 0.00 3.95
261 292 5.239963 GGGACGAATTTCTGGTTTCTTACAA 59.760 40.000 0.00 0.00 0.00 2.41
264 295 4.329392 GGGGACGAATTTCTGGTTTCTTA 58.671 43.478 0.00 0.00 0.00 2.10
265 296 3.154710 GGGGACGAATTTCTGGTTTCTT 58.845 45.455 0.00 0.00 0.00 2.52
281 312 0.319641 GTTCGAGCCATATCGGGGAC 60.320 60.000 0.00 0.00 42.93 4.46
282 313 1.469335 GGTTCGAGCCATATCGGGGA 61.469 60.000 14.14 0.00 42.93 4.81
283 314 1.004918 GGTTCGAGCCATATCGGGG 60.005 63.158 14.14 0.00 42.93 5.73
285 316 0.319900 CAGGGTTCGAGCCATATCGG 60.320 60.000 20.67 0.00 42.93 4.18
287 318 0.759346 ACCAGGGTTCGAGCCATATC 59.241 55.000 20.67 2.28 38.48 1.63
288 319 1.134098 CAACCAGGGTTCGAGCCATAT 60.134 52.381 20.67 1.69 38.48 1.78
290 321 1.002134 CAACCAGGGTTCGAGCCAT 60.002 57.895 20.67 10.64 38.48 4.40
292 323 2.180159 TAGCAACCAGGGTTCGAGCC 62.180 60.000 10.28 10.28 36.00 4.70
293 324 0.741221 CTAGCAACCAGGGTTCGAGC 60.741 60.000 0.00 2.37 36.00 5.03
294 325 0.895530 TCTAGCAACCAGGGTTCGAG 59.104 55.000 0.00 3.24 36.00 4.04
295 326 0.895530 CTCTAGCAACCAGGGTTCGA 59.104 55.000 0.00 0.00 36.00 3.71
296 327 0.895530 TCTCTAGCAACCAGGGTTCG 59.104 55.000 0.00 0.00 36.00 3.95
299 330 0.543749 GCATCTCTAGCAACCAGGGT 59.456 55.000 0.00 0.00 0.00 4.34
300 331 0.179034 GGCATCTCTAGCAACCAGGG 60.179 60.000 0.00 0.00 0.00 4.45
301 332 0.543277 TGGCATCTCTAGCAACCAGG 59.457 55.000 0.00 0.00 0.00 4.45
302 333 1.209019 AGTGGCATCTCTAGCAACCAG 59.791 52.381 0.00 0.00 36.57 4.00
303 334 1.065926 CAGTGGCATCTCTAGCAACCA 60.066 52.381 0.00 0.00 36.57 3.67
304 335 1.661341 CAGTGGCATCTCTAGCAACC 58.339 55.000 0.00 0.00 36.57 3.77
305 336 1.012841 GCAGTGGCATCTCTAGCAAC 58.987 55.000 0.00 0.00 40.72 4.17
306 337 0.460811 CGCAGTGGCATCTCTAGCAA 60.461 55.000 0.00 0.00 41.24 3.91
307 338 1.142531 CGCAGTGGCATCTCTAGCA 59.857 57.895 0.00 0.00 41.24 3.49
308 339 2.243264 GCGCAGTGGCATCTCTAGC 61.243 63.158 0.30 0.00 41.24 3.42
309 340 0.597118 GAGCGCAGTGGCATCTCTAG 60.597 60.000 11.47 0.00 41.24 2.43
310 341 1.439228 GAGCGCAGTGGCATCTCTA 59.561 57.895 11.47 0.00 41.24 2.43
311 342 2.186384 GAGCGCAGTGGCATCTCT 59.814 61.111 11.47 0.00 41.24 3.10
312 343 2.894387 GGAGCGCAGTGGCATCTC 60.894 66.667 11.47 0.00 41.24 2.75
313 344 4.479993 GGGAGCGCAGTGGCATCT 62.480 66.667 11.47 0.00 41.24 2.90
314 345 3.984193 AAGGGAGCGCAGTGGCATC 62.984 63.158 11.47 0.00 41.24 3.91
315 346 4.039092 AAGGGAGCGCAGTGGCAT 62.039 61.111 11.47 0.00 41.24 4.40
321 352 3.315142 TAGTGGCAAGGGAGCGCAG 62.315 63.158 11.47 0.00 34.64 5.18
322 353 3.315142 CTAGTGGCAAGGGAGCGCA 62.315 63.158 11.47 0.00 34.64 6.09
323 354 2.512515 CTAGTGGCAAGGGAGCGC 60.513 66.667 0.00 0.00 34.64 5.92
324 355 2.187946 CCTAGTGGCAAGGGAGCG 59.812 66.667 0.00 0.00 34.64 5.03
341 372 7.605410 CTAGTATAGAGAACTAGGCTGTAGC 57.395 44.000 0.00 0.00 42.77 3.58
363 394 9.542462 ACGCAATTAATAAGCTATTCTTCACTA 57.458 29.630 10.10 0.00 36.25 2.74
364 395 8.338259 CACGCAATTAATAAGCTATTCTTCACT 58.662 33.333 10.10 0.00 36.25 3.41
365 396 7.112148 GCACGCAATTAATAAGCTATTCTTCAC 59.888 37.037 10.10 0.00 36.25 3.18
366 397 7.132213 GCACGCAATTAATAAGCTATTCTTCA 58.868 34.615 10.10 0.00 36.25 3.02
399 430 2.495669 ACAAGGTCACACCCAACTTTTG 59.504 45.455 0.00 0.00 39.75 2.44
485 517 3.005554 CAGCTCAAGTTCAACCGATCAT 58.994 45.455 0.00 0.00 0.00 2.45
486 518 2.416747 CAGCTCAAGTTCAACCGATCA 58.583 47.619 0.00 0.00 0.00 2.92
587 649 5.587388 CAACTTTATCATCAGTTGGCCAT 57.413 39.130 6.09 0.00 44.19 4.40
598 660 4.141620 ACGAGATCTGCCCAACTTTATCAT 60.142 41.667 0.00 0.00 0.00 2.45
638 702 0.755686 GGCTACCCATGGAGAGACAG 59.244 60.000 15.22 0.00 0.00 3.51
657 721 1.071471 ACCACAAAGGACTCGGCAG 59.929 57.895 0.00 0.00 41.22 4.85
658 722 1.227823 CACCACAAAGGACTCGGCA 60.228 57.895 0.00 0.00 41.22 5.69
674 765 0.094730 GCATGTAAACGCGTCCTCAC 59.905 55.000 14.44 8.88 0.00 3.51
870 1007 2.936919 TCCACAGATGCAAGTGTCTT 57.063 45.000 13.87 0.00 33.99 3.01
891 1032 4.443034 GGTTTGGGTAGCTACTGATCGATT 60.443 45.833 22.74 0.00 0.00 3.34
946 1089 0.107945 AGAAGCAGGAACTCGATGGC 60.108 55.000 0.00 0.00 34.60 4.40
977 1124 1.003580 CCTGCTTCTGGGTTGCTAGAA 59.996 52.381 0.00 0.00 0.00 2.10
991 1139 2.041620 TCCTTACCTTCATTGCCTGCTT 59.958 45.455 0.00 0.00 0.00 3.91
996 1144 2.100197 GGGTTCCTTACCTTCATTGCC 58.900 52.381 0.00 0.00 46.86 4.52
1321 10711 1.176527 CCTTGATGATTTGGGCGTGT 58.823 50.000 0.00 0.00 0.00 4.49
1363 10753 3.326588 TCGGGTCATCCTTCTTCTTTTCA 59.673 43.478 0.00 0.00 0.00 2.69
1365 10755 4.327680 CTTCGGGTCATCCTTCTTCTTTT 58.672 43.478 0.00 0.00 0.00 2.27
1366 10756 3.870299 GCTTCGGGTCATCCTTCTTCTTT 60.870 47.826 0.00 0.00 0.00 2.52
1367 10757 2.355209 GCTTCGGGTCATCCTTCTTCTT 60.355 50.000 0.00 0.00 0.00 2.52
1570 15188 9.145865 GAGAGTATGTCTCGATTTTTCTTTTCT 57.854 33.333 0.00 0.00 46.86 2.52
1588 15206 7.589395 AGCTCGTAAATGTAGATGAGAGTATG 58.411 38.462 0.00 0.00 0.00 2.39
1596 15214 3.633235 AGCGAGCTCGTAAATGTAGATG 58.367 45.455 34.46 5.04 42.22 2.90
1602 15220 0.026803 GCCAAGCGAGCTCGTAAATG 59.973 55.000 34.46 25.45 42.22 2.32
1682 15300 9.515226 TGACTTTTACAAAAATCTATAGGCACT 57.485 29.630 0.00 0.00 46.37 4.40
1747 15365 9.811995 GTACATGTTTGGTATTGTAGATGTAGA 57.188 33.333 2.30 0.00 0.00 2.59
1748 15366 9.594478 TGTACATGTTTGGTATTGTAGATGTAG 57.406 33.333 2.30 0.00 0.00 2.74
1750 15368 9.461312 AATGTACATGTTTGGTATTGTAGATGT 57.539 29.630 9.63 0.00 31.34 3.06
1751 15369 9.935682 GAATGTACATGTTTGGTATTGTAGATG 57.064 33.333 9.63 0.00 31.34 2.90
1752 15370 9.905713 AGAATGTACATGTTTGGTATTGTAGAT 57.094 29.630 9.63 0.00 31.99 1.98
1753 15371 9.161629 CAGAATGTACATGTTTGGTATTGTAGA 57.838 33.333 9.63 0.00 0.00 2.59
1754 15372 9.161629 TCAGAATGTACATGTTTGGTATTGTAG 57.838 33.333 9.63 0.00 37.40 2.74
1755 15373 9.508642 TTCAGAATGTACATGTTTGGTATTGTA 57.491 29.630 9.63 0.00 37.40 2.41
1756 15374 7.994425 TCAGAATGTACATGTTTGGTATTGT 57.006 32.000 9.63 0.00 37.40 2.71
1757 15375 9.689976 TTTTCAGAATGTACATGTTTGGTATTG 57.310 29.630 9.63 0.00 37.40 1.90
1800 15418 7.591421 AGAATATCAAATGCACATCATTGGA 57.409 32.000 0.00 0.00 46.22 3.53
1801 15419 8.789762 TCTAGAATATCAAATGCACATCATTGG 58.210 33.333 0.00 0.00 44.23 3.16
1804 15422 9.516546 ACATCTAGAATATCAAATGCACATCAT 57.483 29.630 0.00 0.00 36.87 2.45
1805 15423 8.913487 ACATCTAGAATATCAAATGCACATCA 57.087 30.769 0.00 0.00 0.00 3.07
1807 15425 9.224267 GGTACATCTAGAATATCAAATGCACAT 57.776 33.333 0.00 0.00 0.00 3.21
1808 15426 8.432013 AGGTACATCTAGAATATCAAATGCACA 58.568 33.333 0.00 0.00 0.00 4.57
1809 15427 8.839310 AGGTACATCTAGAATATCAAATGCAC 57.161 34.615 0.00 0.00 0.00 4.57
1810 15428 9.929180 GTAGGTACATCTAGAATATCAAATGCA 57.071 33.333 0.00 0.00 0.00 3.96
1849 15467 9.705290 GTCAAACATTCCAAACTTTAACCATAT 57.295 29.630 0.00 0.00 0.00 1.78
1850 15468 8.919145 AGTCAAACATTCCAAACTTTAACCATA 58.081 29.630 0.00 0.00 0.00 2.74
1851 15469 7.791029 AGTCAAACATTCCAAACTTTAACCAT 58.209 30.769 0.00 0.00 0.00 3.55
1852 15470 7.176589 AGTCAAACATTCCAAACTTTAACCA 57.823 32.000 0.00 0.00 0.00 3.67
1853 15471 7.547722 ACAAGTCAAACATTCCAAACTTTAACC 59.452 33.333 0.00 0.00 0.00 2.85
1854 15472 8.379902 CACAAGTCAAACATTCCAAACTTTAAC 58.620 33.333 0.00 0.00 0.00 2.01
1855 15473 7.064016 GCACAAGTCAAACATTCCAAACTTTAA 59.936 33.333 0.00 0.00 0.00 1.52
1856 15474 6.533367 GCACAAGTCAAACATTCCAAACTTTA 59.467 34.615 0.00 0.00 0.00 1.85
1857 15475 5.351189 GCACAAGTCAAACATTCCAAACTTT 59.649 36.000 0.00 0.00 0.00 2.66
1858 15476 4.869861 GCACAAGTCAAACATTCCAAACTT 59.130 37.500 0.00 0.00 0.00 2.66
1859 15477 4.081752 TGCACAAGTCAAACATTCCAAACT 60.082 37.500 0.00 0.00 0.00 2.66
1860 15478 4.180057 TGCACAAGTCAAACATTCCAAAC 58.820 39.130 0.00 0.00 0.00 2.93
1861 15479 4.462508 TGCACAAGTCAAACATTCCAAA 57.537 36.364 0.00 0.00 0.00 3.28
1862 15480 4.462508 TTGCACAAGTCAAACATTCCAA 57.537 36.364 0.00 0.00 0.00 3.53
1863 15481 4.462508 TTTGCACAAGTCAAACATTCCA 57.537 36.364 0.00 0.00 0.00 3.53
1864 15482 5.793026 TTTTTGCACAAGTCAAACATTCC 57.207 34.783 0.00 0.00 33.66 3.01
1865 15483 7.237920 AGATTTTTGCACAAGTCAAACATTC 57.762 32.000 10.28 0.00 33.66 2.67
1866 15484 8.891671 ATAGATTTTTGCACAAGTCAAACATT 57.108 26.923 10.28 0.00 33.66 2.71
1867 15485 9.979578 TTATAGATTTTTGCACAAGTCAAACAT 57.020 25.926 10.28 1.88 33.66 2.71
1868 15486 9.462174 CTTATAGATTTTTGCACAAGTCAAACA 57.538 29.630 10.28 0.00 33.66 2.83
1869 15487 8.427774 GCTTATAGATTTTTGCACAAGTCAAAC 58.572 33.333 10.28 0.00 33.66 2.93
1870 15488 8.140628 TGCTTATAGATTTTTGCACAAGTCAAA 58.859 29.630 10.28 0.00 0.00 2.69
1871 15489 7.594758 GTGCTTATAGATTTTTGCACAAGTCAA 59.405 33.333 10.28 0.00 46.64 3.18
1872 15490 7.083858 GTGCTTATAGATTTTTGCACAAGTCA 58.916 34.615 10.28 0.00 46.64 3.41
1873 15491 7.498070 GTGCTTATAGATTTTTGCACAAGTC 57.502 36.000 10.44 0.12 46.64 3.01
1887 15505 9.470399 TCCGTTCCATAATATAGTGCTTATAGA 57.530 33.333 0.00 0.00 0.00 1.98
1888 15506 9.737427 CTCCGTTCCATAATATAGTGCTTATAG 57.263 37.037 0.00 0.00 0.00 1.31
1889 15507 8.692710 CCTCCGTTCCATAATATAGTGCTTATA 58.307 37.037 0.00 0.00 0.00 0.98
1890 15508 7.364762 CCCTCCGTTCCATAATATAGTGCTTAT 60.365 40.741 0.00 0.00 0.00 1.73
1891 15509 6.070995 CCCTCCGTTCCATAATATAGTGCTTA 60.071 42.308 0.00 0.00 0.00 3.09
1892 15510 5.280011 CCCTCCGTTCCATAATATAGTGCTT 60.280 44.000 0.00 0.00 0.00 3.91
1893 15511 4.223032 CCCTCCGTTCCATAATATAGTGCT 59.777 45.833 0.00 0.00 0.00 4.40
1894 15512 4.222145 TCCCTCCGTTCCATAATATAGTGC 59.778 45.833 0.00 0.00 0.00 4.40
1895 15513 5.480772 ACTCCCTCCGTTCCATAATATAGTG 59.519 44.000 0.00 0.00 0.00 2.74
1896 15514 5.652324 ACTCCCTCCGTTCCATAATATAGT 58.348 41.667 0.00 0.00 0.00 2.12
1897 15515 7.560262 TCATACTCCCTCCGTTCCATAATATAG 59.440 40.741 0.00 0.00 0.00 1.31
1898 15516 7.415908 TCATACTCCCTCCGTTCCATAATATA 58.584 38.462 0.00 0.00 0.00 0.86
1899 15517 6.261435 TCATACTCCCTCCGTTCCATAATAT 58.739 40.000 0.00 0.00 0.00 1.28
1900 15518 5.647230 TCATACTCCCTCCGTTCCATAATA 58.353 41.667 0.00 0.00 0.00 0.98
1901 15519 4.489737 TCATACTCCCTCCGTTCCATAAT 58.510 43.478 0.00 0.00 0.00 1.28
1902 15520 3.918566 TCATACTCCCTCCGTTCCATAA 58.081 45.455 0.00 0.00 0.00 1.90
1903 15521 3.605726 TCATACTCCCTCCGTTCCATA 57.394 47.619 0.00 0.00 0.00 2.74
1904 15522 2.471815 TCATACTCCCTCCGTTCCAT 57.528 50.000 0.00 0.00 0.00 3.41
1905 15523 2.241281 TTCATACTCCCTCCGTTCCA 57.759 50.000 0.00 0.00 0.00 3.53
1906 15524 2.966516 AGATTCATACTCCCTCCGTTCC 59.033 50.000 0.00 0.00 0.00 3.62
1907 15525 3.637229 TGAGATTCATACTCCCTCCGTTC 59.363 47.826 0.00 0.00 33.95 3.95
1908 15526 3.639094 CTGAGATTCATACTCCCTCCGTT 59.361 47.826 0.00 0.00 33.95 4.44
1909 15527 3.226777 CTGAGATTCATACTCCCTCCGT 58.773 50.000 0.00 0.00 33.95 4.69
1910 15528 3.226777 ACTGAGATTCATACTCCCTCCG 58.773 50.000 0.00 0.00 33.95 4.63
1911 15529 4.898861 AGAACTGAGATTCATACTCCCTCC 59.101 45.833 0.00 0.00 33.95 4.30
1912 15530 5.596361 TGAGAACTGAGATTCATACTCCCTC 59.404 44.000 0.00 0.00 33.95 4.30
1913 15531 5.362430 GTGAGAACTGAGATTCATACTCCCT 59.638 44.000 0.00 0.00 33.95 4.20
1914 15532 5.596845 GTGAGAACTGAGATTCATACTCCC 58.403 45.833 0.00 0.00 33.95 4.30
1915 15533 5.277825 CGTGAGAACTGAGATTCATACTCC 58.722 45.833 0.00 0.00 33.95 3.85
1916 15534 4.737765 GCGTGAGAACTGAGATTCATACTC 59.262 45.833 0.00 0.00 35.26 2.59
1917 15535 4.158579 TGCGTGAGAACTGAGATTCATACT 59.841 41.667 0.00 0.00 0.00 2.12
1918 15536 4.266502 GTGCGTGAGAACTGAGATTCATAC 59.733 45.833 0.00 0.00 36.44 2.39
2020 15642 4.949856 TGCTGTCCTGTTCTTTCTCTTTTT 59.050 37.500 0.00 0.00 0.00 1.94
2021 15643 4.336713 GTGCTGTCCTGTTCTTTCTCTTTT 59.663 41.667 0.00 0.00 0.00 2.27
2022 15644 3.879892 GTGCTGTCCTGTTCTTTCTCTTT 59.120 43.478 0.00 0.00 0.00 2.52
2023 15645 3.471680 GTGCTGTCCTGTTCTTTCTCTT 58.528 45.455 0.00 0.00 0.00 2.85
2024 15646 2.546795 CGTGCTGTCCTGTTCTTTCTCT 60.547 50.000 0.00 0.00 0.00 3.10
2025 15647 1.795286 CGTGCTGTCCTGTTCTTTCTC 59.205 52.381 0.00 0.00 0.00 2.87
2026 15648 1.412710 TCGTGCTGTCCTGTTCTTTCT 59.587 47.619 0.00 0.00 0.00 2.52
2027 15649 1.865865 TCGTGCTGTCCTGTTCTTTC 58.134 50.000 0.00 0.00 0.00 2.62
2028 15650 2.550830 ATCGTGCTGTCCTGTTCTTT 57.449 45.000 0.00 0.00 0.00 2.52
2029 15651 2.826128 TCTATCGTGCTGTCCTGTTCTT 59.174 45.455 0.00 0.00 0.00 2.52
2030 15652 2.447443 TCTATCGTGCTGTCCTGTTCT 58.553 47.619 0.00 0.00 0.00 3.01
2031 15653 2.941453 TCTATCGTGCTGTCCTGTTC 57.059 50.000 0.00 0.00 0.00 3.18
2032 15654 4.207955 TCTATCTATCGTGCTGTCCTGTT 58.792 43.478 0.00 0.00 0.00 3.16
2033 15655 3.821748 TCTATCTATCGTGCTGTCCTGT 58.178 45.455 0.00 0.00 0.00 4.00
2034 15656 5.877564 TCTATCTATCTATCGTGCTGTCCTG 59.122 44.000 0.00 0.00 0.00 3.86
2035 15657 5.878116 GTCTATCTATCTATCGTGCTGTCCT 59.122 44.000 0.00 0.00 0.00 3.85
2036 15658 5.644206 TGTCTATCTATCTATCGTGCTGTCC 59.356 44.000 0.00 0.00 0.00 4.02
2037 15659 6.370442 ACTGTCTATCTATCTATCGTGCTGTC 59.630 42.308 0.00 0.00 0.00 3.51
2038 15660 6.234920 ACTGTCTATCTATCTATCGTGCTGT 58.765 40.000 0.00 0.00 0.00 4.40
2039 15661 6.735678 ACTGTCTATCTATCTATCGTGCTG 57.264 41.667 0.00 0.00 0.00 4.41
2040 15662 6.091577 CGAACTGTCTATCTATCTATCGTGCT 59.908 42.308 0.00 0.00 0.00 4.40
2041 15663 6.128499 ACGAACTGTCTATCTATCTATCGTGC 60.128 42.308 0.00 0.00 38.25 5.34
2042 15664 7.354025 ACGAACTGTCTATCTATCTATCGTG 57.646 40.000 0.00 0.00 38.25 4.35
2043 15665 7.585286 GACGAACTGTCTATCTATCTATCGT 57.415 40.000 0.00 0.00 44.58 3.73
2073 15695 0.841289 TGACGTCCCACCTTTTCCTT 59.159 50.000 14.12 0.00 0.00 3.36
2075 15697 0.179040 TGTGACGTCCCACCTTTTCC 60.179 55.000 14.12 0.00 36.26 3.13
2146 15770 4.101585 TGGATCAACTCGAATTATCAGCCT 59.898 41.667 0.00 0.00 0.00 4.58
2176 15800 2.588034 GTGGGATTAGGGCGCGTC 60.588 66.667 8.43 4.38 0.00 5.19
2177 15801 4.171103 GGTGGGATTAGGGCGCGT 62.171 66.667 8.43 0.00 0.00 6.01
2180 15804 4.929707 GGCGGTGGGATTAGGGCG 62.930 72.222 0.00 0.00 0.00 6.13
2181 15805 4.929707 CGGCGGTGGGATTAGGGC 62.930 72.222 0.00 0.00 0.00 5.19
2182 15806 4.929707 GCGGCGGTGGGATTAGGG 62.930 72.222 9.78 0.00 0.00 3.53
2183 15807 4.929707 GGCGGCGGTGGGATTAGG 62.930 72.222 9.78 0.00 0.00 2.69
2184 15808 3.690685 TTGGCGGCGGTGGGATTAG 62.691 63.158 9.78 0.00 0.00 1.73
2185 15809 3.690685 CTTGGCGGCGGTGGGATTA 62.691 63.158 9.78 0.00 0.00 1.75
2197 15821 3.995809 TAGGGAGGGGGACTTGGCG 62.996 68.421 0.00 0.00 0.00 5.69
2198 15822 2.042261 TAGGGAGGGGGACTTGGC 59.958 66.667 0.00 0.00 0.00 4.52
2199 15823 0.691413 GAGTAGGGAGGGGGACTTGG 60.691 65.000 0.00 0.00 0.00 3.61
2200 15824 0.340208 AGAGTAGGGAGGGGGACTTG 59.660 60.000 0.00 0.00 0.00 3.16
2201 15825 0.637743 GAGAGTAGGGAGGGGGACTT 59.362 60.000 0.00 0.00 0.00 3.01
2202 15826 1.298157 GGAGAGTAGGGAGGGGGACT 61.298 65.000 0.00 0.00 0.00 3.85
2203 15827 1.233659 GGAGAGTAGGGAGGGGGAC 59.766 68.421 0.00 0.00 0.00 4.46
2204 15828 1.000041 GAGGAGAGTAGGGAGGGGGA 61.000 65.000 0.00 0.00 0.00 4.81
2205 15829 1.544703 GAGGAGAGTAGGGAGGGGG 59.455 68.421 0.00 0.00 0.00 5.40
2206 15830 1.002242 AGGAGGAGAGTAGGGAGGGG 61.002 65.000 0.00 0.00 0.00 4.79
2207 15831 0.481128 GAGGAGGAGAGTAGGGAGGG 59.519 65.000 0.00 0.00 0.00 4.30
2208 15832 0.481128 GGAGGAGGAGAGTAGGGAGG 59.519 65.000 0.00 0.00 0.00 4.30
2209 15833 0.481128 GGGAGGAGGAGAGTAGGGAG 59.519 65.000 0.00 0.00 0.00 4.30
2210 15834 0.048117 AGGGAGGAGGAGAGTAGGGA 59.952 60.000 0.00 0.00 0.00 4.20
2211 15835 0.481128 GAGGGAGGAGGAGAGTAGGG 59.519 65.000 0.00 0.00 0.00 3.53
2212 15836 0.109723 CGAGGGAGGAGGAGAGTAGG 59.890 65.000 0.00 0.00 0.00 3.18
2213 15837 0.536460 GCGAGGGAGGAGGAGAGTAG 60.536 65.000 0.00 0.00 0.00 2.57
2214 15838 1.532728 GCGAGGGAGGAGGAGAGTA 59.467 63.158 0.00 0.00 0.00 2.59
2215 15839 2.277404 GCGAGGGAGGAGGAGAGT 59.723 66.667 0.00 0.00 0.00 3.24
2216 15840 2.520741 GGCGAGGGAGGAGGAGAG 60.521 72.222 0.00 0.00 0.00 3.20
2217 15841 4.507916 CGGCGAGGGAGGAGGAGA 62.508 72.222 0.00 0.00 0.00 3.71
2280 15904 2.590575 AATCAATACCCGCCGCCG 60.591 61.111 0.00 0.00 0.00 6.46
2281 15905 1.782028 GACAATCAATACCCGCCGCC 61.782 60.000 0.00 0.00 0.00 6.13
2282 15906 1.647084 GACAATCAATACCCGCCGC 59.353 57.895 0.00 0.00 0.00 6.53
2283 15907 1.164041 GGGACAATCAATACCCGCCG 61.164 60.000 0.00 0.00 32.73 6.46
2284 15908 0.822121 GGGGACAATCAATACCCGCC 60.822 60.000 0.00 0.00 42.90 6.13
2285 15909 0.182775 AGGGGACAATCAATACCCGC 59.817 55.000 0.00 0.00 46.10 6.13
2286 15910 2.297701 CAAGGGGACAATCAATACCCG 58.702 52.381 0.00 0.00 46.10 5.28
2287 15911 2.031870 GCAAGGGGACAATCAATACCC 58.968 52.381 0.00 0.00 41.80 3.69
2288 15912 1.676006 CGCAAGGGGACAATCAATACC 59.324 52.381 0.00 0.00 0.00 2.73
2289 15913 1.065551 GCGCAAGGGGACAATCAATAC 59.934 52.381 0.30 0.00 38.28 1.89
2290 15914 1.340502 TGCGCAAGGGGACAATCAATA 60.341 47.619 8.16 0.00 38.28 1.90
2291 15915 0.611618 TGCGCAAGGGGACAATCAAT 60.612 50.000 8.16 0.00 38.28 2.57
2292 15916 0.825425 TTGCGCAAGGGGACAATCAA 60.825 50.000 21.02 0.00 38.28 2.57
2293 15917 0.825425 TTTGCGCAAGGGGACAATCA 60.825 50.000 23.68 0.76 38.28 2.57
2294 15918 0.109132 CTTTGCGCAAGGGGACAATC 60.109 55.000 23.35 0.00 38.28 2.67
2295 15919 1.966762 CTTTGCGCAAGGGGACAAT 59.033 52.632 23.35 0.00 38.28 2.71
2296 15920 3.442441 CTTTGCGCAAGGGGACAA 58.558 55.556 23.35 6.31 38.28 3.18
2316 15940 3.916392 AAGAACCGACTCGCGCCAG 62.916 63.158 0.00 0.00 39.11 4.85
2317 15941 3.909258 GAAGAACCGACTCGCGCCA 62.909 63.158 0.00 0.00 39.11 5.69
2318 15942 3.179939 GAAGAACCGACTCGCGCC 61.180 66.667 0.00 0.00 39.11 6.53
2319 15943 3.533691 CGAAGAACCGACTCGCGC 61.534 66.667 0.00 0.00 39.11 6.86
2320 15944 2.874780 CCGAAGAACCGACTCGCG 60.875 66.667 0.00 0.00 40.47 5.87
2321 15945 2.506438 CCCGAAGAACCGACTCGC 60.506 66.667 0.00 0.00 0.00 5.03
2322 15946 1.443872 CACCCGAAGAACCGACTCG 60.444 63.158 0.00 0.00 0.00 4.18
2323 15947 0.109226 CTCACCCGAAGAACCGACTC 60.109 60.000 0.00 0.00 0.00 3.36
2324 15948 1.533469 CCTCACCCGAAGAACCGACT 61.533 60.000 0.00 0.00 0.00 4.18
2325 15949 1.080025 CCTCACCCGAAGAACCGAC 60.080 63.158 0.00 0.00 0.00 4.79
2326 15950 2.280552 CCCTCACCCGAAGAACCGA 61.281 63.158 0.00 0.00 0.00 4.69
2327 15951 2.264794 CCCTCACCCGAAGAACCG 59.735 66.667 0.00 0.00 0.00 4.44
2328 15952 2.046217 GCCCTCACCCGAAGAACC 60.046 66.667 0.00 0.00 0.00 3.62
2329 15953 0.955919 CAAGCCCTCACCCGAAGAAC 60.956 60.000 0.00 0.00 0.00 3.01
2330 15954 1.125093 TCAAGCCCTCACCCGAAGAA 61.125 55.000 0.00 0.00 0.00 2.52
2331 15955 0.909610 ATCAAGCCCTCACCCGAAGA 60.910 55.000 0.00 0.00 0.00 2.87
2332 15956 0.745845 CATCAAGCCCTCACCCGAAG 60.746 60.000 0.00 0.00 0.00 3.79
2333 15957 1.299648 CATCAAGCCCTCACCCGAA 59.700 57.895 0.00 0.00 0.00 4.30
2334 15958 2.989639 CATCAAGCCCTCACCCGA 59.010 61.111 0.00 0.00 0.00 5.14
2335 15959 2.825836 GCATCAAGCCCTCACCCG 60.826 66.667 0.00 0.00 37.23 5.28
2344 15968 1.930908 GACACCCAGCAGCATCAAGC 61.931 60.000 0.00 0.00 46.19 4.01
2345 15969 0.607217 TGACACCCAGCAGCATCAAG 60.607 55.000 0.00 0.00 0.00 3.02
2346 15970 0.607217 CTGACACCCAGCAGCATCAA 60.607 55.000 0.00 0.00 35.89 2.57
2347 15971 1.002990 CTGACACCCAGCAGCATCA 60.003 57.895 0.00 0.00 35.89 3.07
2348 15972 1.748122 CCTGACACCCAGCAGCATC 60.748 63.158 0.00 0.00 41.57 3.91
2349 15973 2.353958 CCTGACACCCAGCAGCAT 59.646 61.111 0.00 0.00 41.57 3.79
2350 15974 3.957586 CCCTGACACCCAGCAGCA 61.958 66.667 0.00 0.00 41.57 4.41
2351 15975 3.958860 ACCCTGACACCCAGCAGC 61.959 66.667 0.00 0.00 41.57 5.25
2352 15976 2.033141 CACCCTGACACCCAGCAG 59.967 66.667 0.00 0.00 41.57 4.24
2353 15977 2.772191 ACACCCTGACACCCAGCA 60.772 61.111 0.00 0.00 41.57 4.41
2354 15978 2.281761 CACACCCTGACACCCAGC 60.282 66.667 0.00 0.00 41.57 4.85
2355 15979 0.535102 GAACACACCCTGACACCCAG 60.535 60.000 0.00 0.00 42.55 4.45
2356 15980 1.529796 GAACACACCCTGACACCCA 59.470 57.895 0.00 0.00 0.00 4.51
2357 15981 1.597027 CGAACACACCCTGACACCC 60.597 63.158 0.00 0.00 0.00 4.61
2358 15982 0.878961 GACGAACACACCCTGACACC 60.879 60.000 0.00 0.00 0.00 4.16
2359 15983 0.878961 GGACGAACACACCCTGACAC 60.879 60.000 0.00 0.00 0.00 3.67
2360 15984 1.444250 GGACGAACACACCCTGACA 59.556 57.895 0.00 0.00 0.00 3.58
2361 15985 1.663702 CGGACGAACACACCCTGAC 60.664 63.158 0.00 0.00 0.00 3.51
2362 15986 2.732016 CGGACGAACACACCCTGA 59.268 61.111 0.00 0.00 0.00 3.86
2363 15987 3.041940 GCGGACGAACACACCCTG 61.042 66.667 0.00 0.00 0.00 4.45
2364 15988 4.309950 GGCGGACGAACACACCCT 62.310 66.667 0.00 0.00 0.00 4.34
2385 16009 3.029735 CCGCACCAAACGCAAAGC 61.030 61.111 0.00 0.00 0.00 3.51
2386 16010 3.029735 GCCGCACCAAACGCAAAG 61.030 61.111 0.00 0.00 0.00 2.77
2387 16011 4.914420 CGCCGCACCAAACGCAAA 62.914 61.111 0.00 0.00 0.00 3.68
2392 16016 2.746277 ATCTCCGCCGCACCAAAC 60.746 61.111 0.00 0.00 0.00 2.93
2393 16017 2.745884 CATCTCCGCCGCACCAAA 60.746 61.111 0.00 0.00 0.00 3.28
2403 16027 4.812476 TTGTCCGCCGCATCTCCG 62.812 66.667 0.00 0.00 0.00 4.63
2404 16028 1.376609 ATTTTGTCCGCCGCATCTCC 61.377 55.000 0.00 0.00 0.00 3.71
2405 16029 0.248215 CATTTTGTCCGCCGCATCTC 60.248 55.000 0.00 0.00 0.00 2.75
2406 16030 1.656818 CCATTTTGTCCGCCGCATCT 61.657 55.000 0.00 0.00 0.00 2.90
2407 16031 1.226660 CCATTTTGTCCGCCGCATC 60.227 57.895 0.00 0.00 0.00 3.91
2408 16032 2.884367 CCATTTTGTCCGCCGCAT 59.116 55.556 0.00 0.00 0.00 4.73
2409 16033 4.049640 GCCATTTTGTCCGCCGCA 62.050 61.111 0.00 0.00 0.00 5.69
2410 16034 3.281359 AAGCCATTTTGTCCGCCGC 62.281 57.895 0.00 0.00 0.00 6.53
2411 16035 1.444212 CAAGCCATTTTGTCCGCCG 60.444 57.895 0.00 0.00 0.00 6.46
2412 16036 0.109132 CTCAAGCCATTTTGTCCGCC 60.109 55.000 0.00 0.00 0.00 6.13
2413 16037 0.109132 CCTCAAGCCATTTTGTCCGC 60.109 55.000 0.00 0.00 0.00 5.54
2414 16038 0.109132 GCCTCAAGCCATTTTGTCCG 60.109 55.000 0.00 0.00 34.35 4.79
2415 16039 1.067354 CAGCCTCAAGCCATTTTGTCC 60.067 52.381 0.00 0.00 45.47 4.02
2416 16040 1.067354 CCAGCCTCAAGCCATTTTGTC 60.067 52.381 0.00 0.00 45.47 3.18
2417 16041 0.971386 CCAGCCTCAAGCCATTTTGT 59.029 50.000 0.00 0.00 45.47 2.83
2418 16042 1.203994 CTCCAGCCTCAAGCCATTTTG 59.796 52.381 0.00 0.00 45.47 2.44
2419 16043 1.553706 CTCCAGCCTCAAGCCATTTT 58.446 50.000 0.00 0.00 45.47 1.82
2420 16044 0.969409 GCTCCAGCCTCAAGCCATTT 60.969 55.000 0.00 0.00 45.47 2.32
2421 16045 1.379576 GCTCCAGCCTCAAGCCATT 60.380 57.895 0.00 0.00 45.47 3.16
2422 16046 2.274760 GCTCCAGCCTCAAGCCAT 59.725 61.111 0.00 0.00 45.47 4.40
2433 16057 4.087892 CACTCCACCGGGCTCCAG 62.088 72.222 6.32 0.00 0.00 3.86
2439 16063 4.838152 CATCGCCACTCCACCGGG 62.838 72.222 6.32 0.00 0.00 5.73
2440 16064 4.082523 ACATCGCCACTCCACCGG 62.083 66.667 0.00 0.00 0.00 5.28
2441 16065 2.815211 CACATCGCCACTCCACCG 60.815 66.667 0.00 0.00 0.00 4.94
2442 16066 2.436646 CCACATCGCCACTCCACC 60.437 66.667 0.00 0.00 0.00 4.61
2443 16067 2.034879 CACCACATCGCCACTCCAC 61.035 63.158 0.00 0.00 0.00 4.02
2444 16068 2.347114 CACCACATCGCCACTCCA 59.653 61.111 0.00 0.00 0.00 3.86
2445 16069 2.436646 CCACCACATCGCCACTCC 60.437 66.667 0.00 0.00 0.00 3.85
2446 16070 2.034879 CACCACCACATCGCCACTC 61.035 63.158 0.00 0.00 0.00 3.51
2447 16071 2.032528 CACCACCACATCGCCACT 59.967 61.111 0.00 0.00 0.00 4.00
2448 16072 3.055719 CCACCACCACATCGCCAC 61.056 66.667 0.00 0.00 0.00 5.01
2449 16073 3.565214 ACCACCACCACATCGCCA 61.565 61.111 0.00 0.00 0.00 5.69
2450 16074 3.055719 CACCACCACCACATCGCC 61.056 66.667 0.00 0.00 0.00 5.54
2451 16075 3.055719 CCACCACCACCACATCGC 61.056 66.667 0.00 0.00 0.00 4.58
2452 16076 2.359850 CCCACCACCACCACATCG 60.360 66.667 0.00 0.00 0.00 3.84
2453 16077 2.035626 CCCCACCACCACCACATC 59.964 66.667 0.00 0.00 0.00 3.06
2454 16078 4.299796 GCCCCACCACCACCACAT 62.300 66.667 0.00 0.00 0.00 3.21
2478 16102 4.899239 CCAGATCGACCGGCTGCC 62.899 72.222 9.11 9.11 0.00 4.85


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.