Multiple sequence alignment - TraesCS2B01G347800

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G347800 chr2B 100.000 4497 0 0 2636 7132 494372799 494377295 0.000000e+00 8305.0
1 TraesCS2B01G347800 chr2B 100.000 2316 0 0 1 2316 494370164 494372479 0.000000e+00 4277.0
2 TraesCS2B01G347800 chr2B 82.383 579 50 16 6410 6938 5978802 5979378 2.340000e-124 457.0
3 TraesCS2B01G347800 chr2B 87.640 267 29 3 3154 3417 413444484 413444219 2.500000e-79 307.0
4 TraesCS2B01G347800 chr2B 93.970 199 11 1 6935 7132 667948663 667948465 4.180000e-77 300.0
5 TraesCS2B01G347800 chr2B 84.270 89 14 0 564 652 653981097 653981009 3.540000e-13 87.9
6 TraesCS2B01G347800 chr2D 93.370 1644 101 2 4587 6229 422081449 422083085 0.000000e+00 2425.0
7 TraesCS2B01G347800 chr2D 91.918 1126 57 13 3485 4595 422080304 422081410 0.000000e+00 1544.0
8 TraesCS2B01G347800 chr2D 87.937 887 54 21 772 1642 422078849 422079698 0.000000e+00 996.0
9 TraesCS2B01G347800 chr2D 85.615 723 69 22 1 712 422076561 422077259 0.000000e+00 726.0
10 TraesCS2B01G347800 chr2D 90.876 548 24 9 1641 2168 422079735 422080276 0.000000e+00 712.0
11 TraesCS2B01G347800 chr2D 92.369 249 17 1 3146 3392 459522036 459522284 3.160000e-93 353.0
12 TraesCS2B01G347800 chr2D 86.154 130 4 2 2636 2751 302242471 302242600 2.090000e-25 128.0
13 TraesCS2B01G347800 chr2D 83.505 97 16 0 529 625 28562683 28562587 2.740000e-14 91.6
14 TraesCS2B01G347800 chr2D 97.917 48 1 0 3420 3467 6064552 6064599 4.580000e-12 84.2
15 TraesCS2B01G347800 chr2D 97.917 48 1 0 3420 3467 459522337 459522384 4.580000e-12 84.2
16 TraesCS2B01G347800 chr2D 97.917 48 1 0 3420 3467 650492700 650492653 4.580000e-12 84.2
17 TraesCS2B01G347800 chr2A 91.890 1233 87 8 4597 5817 568403549 568404780 0.000000e+00 1711.0
18 TraesCS2B01G347800 chr2A 93.478 874 28 7 3734 4596 568402652 568403507 0.000000e+00 1271.0
19 TraesCS2B01G347800 chr2A 84.623 995 72 41 692 1642 568399453 568400410 0.000000e+00 915.0
20 TraesCS2B01G347800 chr2A 83.921 709 86 15 1 699 568398740 568399430 0.000000e+00 652.0
21 TraesCS2B01G347800 chr2A 88.409 509 42 9 5856 6351 568404784 568405288 1.320000e-166 597.0
22 TraesCS2B01G347800 chr2A 86.970 330 20 8 1857 2168 568400737 568401061 4.090000e-92 350.0
23 TraesCS2B01G347800 chr2A 85.915 213 9 8 1641 1850 568400447 568400641 2.610000e-49 207.0
24 TraesCS2B01G347800 chr2A 89.516 124 5 1 2636 2751 379115558 379115681 4.460000e-32 150.0
25 TraesCS2B01G347800 chr5A 88.913 460 26 4 2978 3417 34983755 34983301 1.750000e-150 544.0
26 TraesCS2B01G347800 chr5A 97.101 138 4 0 2843 2980 34984050 34983913 4.300000e-57 233.0
27 TraesCS2B01G347800 chr5B 85.027 561 50 14 6411 6938 375650932 375651491 2.260000e-149 540.0
28 TraesCS2B01G347800 chr5B 83.721 559 49 12 6412 6938 356340647 356340099 2.310000e-134 490.0
29 TraesCS2B01G347800 chr5B 83.604 555 52 14 6416 6938 639836237 639836784 1.080000e-132 484.0
30 TraesCS2B01G347800 chr5B 81.520 579 52 25 6412 6938 641414491 641415066 6.610000e-115 425.0
31 TraesCS2B01G347800 chr5B 80.944 572 54 27 6419 6938 695955705 695956273 1.110000e-107 401.0
32 TraesCS2B01G347800 chr5B 94.975 199 9 1 6935 7132 695956470 695956668 1.930000e-80 311.0
33 TraesCS2B01G347800 chr5B 93.939 198 11 1 6935 7131 641415264 641415461 1.500000e-76 298.0
34 TraesCS2B01G347800 chr5B 91.813 171 11 3 2648 2816 495809893 495809724 1.200000e-57 235.0
35 TraesCS2B01G347800 chr5B 89.333 75 8 0 2191 2265 269945996 269945922 2.120000e-15 95.3
36 TraesCS2B01G347800 chr5B 100.000 47 0 0 3421 3467 598746960 598746914 3.540000e-13 87.9
37 TraesCS2B01G347800 chr5B 84.211 76 11 1 2168 2242 232986264 232986339 9.920000e-09 73.1
38 TraesCS2B01G347800 chr5B 95.652 46 1 1 578 623 489822709 489822665 9.920000e-09 73.1
39 TraesCS2B01G347800 chr6B 84.615 559 50 9 6411 6938 153683547 153684100 2.280000e-144 523.0
40 TraesCS2B01G347800 chr6B 89.369 301 29 1 6638 6938 153755070 153755367 6.750000e-100 375.0
41 TraesCS2B01G347800 chr6B 94.554 202 10 1 6932 7132 120651246 120651447 1.930000e-80 311.0
42 TraesCS2B01G347800 chr6B 93.596 203 11 2 6932 7132 461587027 461587229 1.160000e-77 302.0
43 TraesCS2B01G347800 chr6B 97.872 47 1 0 3421 3467 695476457 695476503 1.650000e-11 82.4
44 TraesCS2B01G347800 chr1D 88.529 401 20 8 3037 3417 394468773 394469167 5.040000e-126 462.0
45 TraesCS2B01G347800 chr1D 89.912 228 10 8 2765 2980 394468378 394468604 1.510000e-71 281.0
46 TraesCS2B01G347800 chr1D 79.085 153 25 7 17 166 194181329 194181181 1.640000e-16 99.0
47 TraesCS2B01G347800 chr1D 95.833 48 2 0 3420 3467 33583172 33583125 2.130000e-10 78.7
48 TraesCS2B01G347800 chr1D 95.833 48 2 0 3420 3467 262247162 262247209 2.130000e-10 78.7
49 TraesCS2B01G347800 chr1D 88.710 62 7 0 564 625 229038633 229038572 7.670000e-10 76.8
50 TraesCS2B01G347800 chr1B 82.700 526 47 22 6444 6937 11853424 11852911 1.840000e-115 427.0
51 TraesCS2B01G347800 chr1B 82.870 432 43 10 6528 6938 329714588 329715009 6.800000e-95 359.0
52 TraesCS2B01G347800 chr1B 94.975 199 9 1 6935 7132 11852712 11852514 1.930000e-80 311.0
53 TraesCS2B01G347800 chr1B 93.970 199 11 1 6935 7132 329715186 329715384 4.180000e-77 300.0
54 TraesCS2B01G347800 chr1B 88.936 235 22 4 6410 6642 589763902 589764134 3.260000e-73 287.0
55 TraesCS2B01G347800 chr1B 88.017 242 26 3 6413 6652 625567289 625567049 4.210000e-72 283.0
56 TraesCS2B01G347800 chr1B 80.882 136 21 5 39 172 268841050 268840918 1.270000e-17 102.0
57 TraesCS2B01G347800 chr6A 86.096 374 26 10 3063 3416 591931128 591931495 5.220000e-101 379.0
58 TraesCS2B01G347800 chr6A 96.078 51 2 0 3420 3470 74999285 74999235 4.580000e-12 84.2
59 TraesCS2B01G347800 chr7B 81.349 504 59 12 6455 6938 38684342 38684830 1.880000e-100 377.0
60 TraesCS2B01G347800 chr7B 87.903 124 15 0 2831 2954 61603076 61603199 5.770000e-31 147.0
61 TraesCS2B01G347800 chr7B 100.000 66 0 0 2978 3043 61603725 61603790 9.720000e-24 122.0
62 TraesCS2B01G347800 chr7B 84.932 73 11 0 564 636 17851739 17851811 2.760000e-09 75.0
63 TraesCS2B01G347800 chr5D 93.574 249 14 1 3146 3392 445035243 445034995 3.140000e-98 370.0
64 TraesCS2B01G347800 chr5D 100.000 55 0 0 3095 3149 445035320 445035266 1.270000e-17 102.0
65 TraesCS2B01G347800 chr5D 78.000 150 25 8 28 174 552098353 552098497 3.540000e-13 87.9
66 TraesCS2B01G347800 chr5D 96.078 51 2 0 3420 3470 445034942 445034892 4.580000e-12 84.2
67 TraesCS2B01G347800 chr5D 74.500 200 41 9 426 623 408337041 408336850 2.130000e-10 78.7
68 TraesCS2B01G347800 chr3B 88.599 307 27 2 6638 6938 774163738 774163434 4.070000e-97 366.0
69 TraesCS2B01G347800 chr3B 89.787 235 21 3 6409 6642 9648559 9648327 1.500000e-76 298.0
70 TraesCS2B01G347800 chr3B 82.014 139 20 5 18 154 829112618 829112483 5.850000e-21 113.0
71 TraesCS2B01G347800 chr7A 86.246 349 23 4 3088 3416 127263633 127263976 8.800000e-94 355.0
72 TraesCS2B01G347800 chr7A 90.361 83 8 0 2978 3060 107869905 107869987 7.560000e-20 110.0
73 TraesCS2B01G347800 chr7A 88.608 79 7 2 2165 2242 141059763 141059840 2.120000e-15 95.3
74 TraesCS2B01G347800 chr7A 87.342 79 8 2 2165 2242 140770317 140770394 9.850000e-14 89.8
75 TraesCS2B01G347800 chr7A 87.342 79 8 2 2165 2242 141654293 141654370 9.850000e-14 89.8
76 TraesCS2B01G347800 chr7A 87.342 79 8 2 2165 2242 141905029 141905106 9.850000e-14 89.8
77 TraesCS2B01G347800 chr7D 88.973 263 25 3 3157 3417 159902659 159902919 8.920000e-84 322.0
78 TraesCS2B01G347800 chr7D 100.000 66 0 0 2978 3043 102980506 102980571 9.720000e-24 122.0
79 TraesCS2B01G347800 chr7D 88.764 89 10 0 533 621 21255069 21254981 7.560000e-20 110.0
80 TraesCS2B01G347800 chr6D 93.970 199 11 1 6935 7132 438402356 438402158 4.180000e-77 300.0
81 TraesCS2B01G347800 chr4A 93.970 199 11 1 6935 7132 739513468 739513270 4.180000e-77 300.0
82 TraesCS2B01G347800 chr4A 86.076 79 9 2 2165 2242 588661459 588661536 4.580000e-12 84.2
83 TraesCS2B01G347800 chr4B 88.843 242 21 5 6413 6652 657250675 657250438 7.000000e-75 292.0
84 TraesCS2B01G347800 chr3D 90.233 215 17 1 3206 3416 543930892 543930678 1.960000e-70 278.0
85 TraesCS2B01G347800 chr3D 79.545 132 24 3 23 154 455720339 455720467 2.740000e-14 91.6
86 TraesCS2B01G347800 chr3D 78.000 150 26 7 28 174 561757634 561757489 3.540000e-13 87.9
87 TraesCS2B01G347800 chrUn 82.550 149 24 2 2168 2315 68643195 68643048 5.810000e-26 130.0
88 TraesCS2B01G347800 chrUn 78.000 150 25 8 28 174 243362866 243362722 3.540000e-13 87.9
89 TraesCS2B01G347800 chr1A 93.103 58 4 0 3090 3147 369366090 369366033 1.270000e-12 86.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G347800 chr2B 494370164 494377295 7131 False 6291.000000 8305 100.000000 1 7132 2 chr2B.!!$F2 7131
1 TraesCS2B01G347800 chr2B 5978802 5979378 576 False 457.000000 457 82.383000 6410 6938 1 chr2B.!!$F1 528
2 TraesCS2B01G347800 chr2D 422076561 422083085 6524 False 1280.600000 2425 89.943200 1 6229 5 chr2D.!!$F3 6228
3 TraesCS2B01G347800 chr2A 568398740 568405288 6548 False 814.714286 1711 87.886571 1 6351 7 chr2A.!!$F2 6350
4 TraesCS2B01G347800 chr5A 34983301 34984050 749 True 388.500000 544 93.007000 2843 3417 2 chr5A.!!$R1 574
5 TraesCS2B01G347800 chr5B 375650932 375651491 559 False 540.000000 540 85.027000 6411 6938 1 chr5B.!!$F2 527
6 TraesCS2B01G347800 chr5B 356340099 356340647 548 True 490.000000 490 83.721000 6412 6938 1 chr5B.!!$R2 526
7 TraesCS2B01G347800 chr5B 639836237 639836784 547 False 484.000000 484 83.604000 6416 6938 1 chr5B.!!$F3 522
8 TraesCS2B01G347800 chr5B 641414491 641415461 970 False 361.500000 425 87.729500 6412 7131 2 chr5B.!!$F4 719
9 TraesCS2B01G347800 chr5B 695955705 695956668 963 False 356.000000 401 87.959500 6419 7132 2 chr5B.!!$F5 713
10 TraesCS2B01G347800 chr6B 153683547 153684100 553 False 523.000000 523 84.615000 6411 6938 1 chr6B.!!$F2 527
11 TraesCS2B01G347800 chr1D 394468378 394469167 789 False 371.500000 462 89.220500 2765 3417 2 chr1D.!!$F2 652
12 TraesCS2B01G347800 chr1B 11852514 11853424 910 True 369.000000 427 88.837500 6444 7132 2 chr1B.!!$R3 688
13 TraesCS2B01G347800 chr1B 329714588 329715384 796 False 329.500000 359 88.420000 6528 7132 2 chr1B.!!$F2 604

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
234 238 0.380378 CCCCCGCAAACATCATTACG 59.620 55.0 0.00 0.0 0.0 3.18 F
2179 3970 0.035343 GGACCTAAGGCCAACTCCAC 60.035 60.0 5.01 0.0 0.0 4.02 F
2183 3974 0.036732 CTAAGGCCAACTCCACTGCA 59.963 55.0 5.01 0.0 0.0 4.41 F
3859 7192 0.170339 TATCACTGCTGACGACGTGG 59.830 55.0 4.58 0.0 0.0 4.94 F
4748 8141 0.247736 AGTTCTGATCGTGCTGTCCC 59.752 55.0 0.00 0.0 0.0 4.46 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2195 3986 0.249573 TCCAGACAAAACGGACGTCC 60.250 55.000 25.28 25.28 0.00 4.79 R
3580 5591 0.035056 AAGACGATGGCTTTCAGGGG 60.035 55.000 0.00 0.00 0.00 4.79 R
4124 7457 1.299316 CACCTGTTTGGCACTTGCG 60.299 57.895 0.00 0.00 43.26 4.85 R
5685 9080 0.036952 CTATGATCCCGCCATTCGCT 60.037 55.000 0.00 0.00 36.73 4.93 R
6378 9797 0.104120 CGTTGATCCTGCATCCGGTA 59.896 55.000 0.00 0.00 0.00 4.02 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
47 48 2.234661 TGCCGAACATCTCATGTCTCTT 59.765 45.455 0.00 0.00 44.07 2.85
82 83 5.153513 CCATGTTTACGTCATCTTTGGTTG 58.846 41.667 0.00 0.00 0.00 3.77
192 196 0.534203 ACGCGAGAAAGGCCTTTTGA 60.534 50.000 30.89 0.00 32.11 2.69
234 238 0.380378 CCCCCGCAAACATCATTACG 59.620 55.000 0.00 0.00 0.00 3.18
243 247 7.348956 CCGCAAACATCATTACGATAATACAA 58.651 34.615 0.00 0.00 31.20 2.41
289 293 1.142262 ACATATCCCAAGCGGTTACCC 59.858 52.381 0.00 0.00 0.00 3.69
311 315 7.059156 ACCCTAGTACAGTATAGTTGGTACAG 58.941 42.308 9.62 6.13 42.39 2.74
314 318 9.618890 CCTAGTACAGTATAGTTGGTACAGTTA 57.381 37.037 9.62 0.00 42.39 2.24
318 322 9.028185 GTACAGTATAGTTGGTACAGTTATTGC 57.972 37.037 0.00 0.00 42.39 3.56
360 365 7.448161 TGATACAATTCTTGTGTGTTTGGAGAT 59.552 33.333 2.85 0.00 45.03 2.75
364 369 3.659786 TCTTGTGTGTTTGGAGATACCG 58.340 45.455 0.00 0.00 42.61 4.02
374 379 3.627395 TGGAGATACCGCAGAAAATGT 57.373 42.857 0.00 0.00 42.61 2.71
437 451 5.365605 TGTTGTATGGTTAGGAGGATAGTGG 59.634 44.000 0.00 0.00 0.00 4.00
459 473 5.191722 TGGTATTCTTAGCCCATCAGAGTTT 59.808 40.000 0.00 0.00 0.00 2.66
468 482 9.832445 CTTAGCCCATCAGAGTTTAAGTTATAA 57.168 33.333 0.00 0.00 0.00 0.98
471 485 9.528489 AGCCCATCAGAGTTTAAGTTATAAAAA 57.472 29.630 0.00 0.00 0.00 1.94
495 509 8.524870 AAAACTTGACATTGATGCTTGTATTC 57.475 30.769 0.00 0.00 0.00 1.75
498 512 7.889469 ACTTGACATTGATGCTTGTATTCTTT 58.111 30.769 0.00 0.00 0.00 2.52
499 513 8.362639 ACTTGACATTGATGCTTGTATTCTTTT 58.637 29.630 0.00 0.00 0.00 2.27
541 555 4.201513 CGTTTTAACTATGCGCGTTCAGTA 60.202 41.667 7.78 0.00 0.00 2.74
554 568 2.159544 CGTTCAGTAGGAGGAGACGTTC 60.160 54.545 0.00 0.00 0.00 3.95
595 610 5.178252 CGTCAGTGATGACTTTGTCAATCTT 59.822 40.000 6.49 0.00 45.96 2.40
628 643 4.021104 TGCCGGATCAATCTCTCGAATATT 60.021 41.667 5.05 0.00 0.00 1.28
629 644 4.932200 GCCGGATCAATCTCTCGAATATTT 59.068 41.667 5.05 0.00 0.00 1.40
650 665 9.905713 ATATTTTCATAGAGGTAATGTGTGTGT 57.094 29.630 0.00 0.00 0.00 3.72
655 670 7.672240 TCATAGAGGTAATGTGTGTGTTTACA 58.328 34.615 0.00 0.00 0.00 2.41
666 681 6.974965 TGTGTGTGTTTACATGCATTCATAA 58.025 32.000 0.00 0.00 39.39 1.90
675 690 8.664798 GTTTACATGCATTCATAAGTGTGAGTA 58.335 33.333 0.00 0.00 0.00 2.59
678 693 8.370493 ACATGCATTCATAAGTGTGAGTATAC 57.630 34.615 0.00 0.00 0.00 1.47
681 696 5.387444 GCATTCATAAGTGTGAGTATACGCG 60.387 44.000 3.53 3.53 36.24 6.01
837 2429 2.533266 GAATCTTTGCATTCCCAAGCG 58.467 47.619 0.00 0.00 0.00 4.68
998 2597 2.478803 CCACCCCACCCTTCCCTTT 61.479 63.158 0.00 0.00 0.00 3.11
999 2598 1.076727 CACCCCACCCTTCCCTTTC 59.923 63.158 0.00 0.00 0.00 2.62
1000 2599 2.167729 ACCCCACCCTTCCCTTTCC 61.168 63.158 0.00 0.00 0.00 3.13
1001 2600 2.770827 CCCACCCTTCCCTTTCCC 59.229 66.667 0.00 0.00 0.00 3.97
1002 2601 2.770827 CCACCCTTCCCTTTCCCC 59.229 66.667 0.00 0.00 0.00 4.81
1003 2602 2.770827 CACCCTTCCCTTTCCCCC 59.229 66.667 0.00 0.00 0.00 5.40
1041 2640 2.164663 CATAAAGCAGCCGTCGCGA 61.165 57.895 3.71 3.71 41.18 5.87
1056 2664 1.007154 GCGACGAGGCTATTCTCCC 60.007 63.158 0.00 0.00 0.00 4.30
1117 2725 4.018609 CGCAGCGGAAGATCGAAT 57.981 55.556 7.00 0.00 0.00 3.34
1182 2808 4.424711 GTGAAGGCCATGGCGGGA 62.425 66.667 29.90 11.29 43.06 5.14
1198 2824 2.108976 GATGCCCGGCGAAGATGA 59.891 61.111 9.30 0.00 0.00 2.92
1275 2901 2.228925 GTACGTACTCATCCCTCCCTC 58.771 57.143 18.47 0.00 0.00 4.30
1295 2921 3.811807 CTCCCTCGCCCCCTATCGT 62.812 68.421 0.00 0.00 0.00 3.73
1304 2930 3.671411 CCCTATCGTCTCGCCCGG 61.671 72.222 0.00 0.00 0.00 5.73
1328 2954 1.671850 GGCGTTCTTCGTCTTCATCCA 60.672 52.381 0.00 0.00 41.33 3.41
1335 2961 5.924475 TCTTCGTCTTCATCCAACTTTTC 57.076 39.130 0.00 0.00 0.00 2.29
1373 3004 6.702897 AGATTCCGATCGAATTCGTTTAAAC 58.297 36.000 25.93 8.35 41.47 2.01
1380 3011 6.194508 CGATCGAATTCGTTTAAACCGTAGTA 59.805 38.462 25.93 3.26 40.80 1.82
1473 3113 3.560251 ATGGCGGCGGCTTATCCT 61.560 61.111 33.21 8.97 39.81 3.24
1478 3118 2.513897 GGCGGCTTATCCTTGCGT 60.514 61.111 0.00 0.00 0.00 5.24
1585 3225 2.570169 CGCGACGTTGTTGAATTGAAT 58.430 42.857 0.00 0.00 0.00 2.57
1593 3233 7.160633 ACGTTGTTGAATTGAATAAGCAAAC 57.839 32.000 0.00 0.00 0.00 2.93
1623 3263 7.648039 AGAAATACTACTCCTACCTGACAAG 57.352 40.000 0.00 0.00 0.00 3.16
1662 3340 4.330074 ACTGTTTGTCATATTAGTCGCTGC 59.670 41.667 0.00 0.00 0.00 5.25
1790 3470 6.183360 CCAAAGTTGAATTATTGGATCCCCTC 60.183 42.308 9.90 0.00 44.01 4.30
1854 3627 6.490721 GGTCAGTGCTCTACCTGTATACTATT 59.509 42.308 4.17 0.00 0.00 1.73
1855 3628 7.014422 GGTCAGTGCTCTACCTGTATACTATTT 59.986 40.741 4.17 0.00 0.00 1.40
1914 3693 3.981071 TTCTCATTCGGTGGTCAGATT 57.019 42.857 0.00 0.00 0.00 2.40
2011 3795 1.145738 ACCCCACATGAAAGTGCTCTT 59.854 47.619 0.00 0.00 38.18 2.85
2020 3804 6.204688 CACATGAAAGTGCTCTTTTACCTACA 59.795 38.462 14.50 7.66 42.99 2.74
2027 3811 8.465273 AAGTGCTCTTTTACCTACAGAAAATT 57.535 30.769 0.00 0.00 0.00 1.82
2029 3813 9.000486 AGTGCTCTTTTACCTACAGAAAATTAC 58.000 33.333 0.00 0.00 0.00 1.89
2030 3814 8.780249 GTGCTCTTTTACCTACAGAAAATTACA 58.220 33.333 0.00 0.00 0.00 2.41
2076 3860 3.874543 AGCACTAGAGACTAGACATGACG 59.125 47.826 11.94 0.00 0.00 4.35
2113 3902 3.734463 TGTTGTCTACGATTTTCTGCCA 58.266 40.909 0.00 0.00 0.00 4.92
2121 3910 2.288152 ACGATTTTCTGCCACGCAATTT 60.288 40.909 0.00 0.00 38.41 1.82
2133 3924 4.201871 GCCACGCAATTTTACAGCTGTATA 60.202 41.667 26.54 19.27 0.00 1.47
2138 3929 6.538742 ACGCAATTTTACAGCTGTATATGTCT 59.461 34.615 26.54 7.52 0.00 3.41
2148 3939 4.884744 AGCTGTATATGTCTCTGTTCGAGT 59.115 41.667 0.00 0.00 40.75 4.18
2157 3948 2.096013 TCTCTGTTCGAGTCATGTAGCG 59.904 50.000 0.00 0.00 40.75 4.26
2168 3959 1.409064 TCATGTAGCGCAGGACCTAAG 59.591 52.381 11.47 0.00 32.44 2.18
2169 3960 0.753262 ATGTAGCGCAGGACCTAAGG 59.247 55.000 11.47 0.00 0.00 2.69
2170 3961 1.227292 GTAGCGCAGGACCTAAGGC 60.227 63.158 11.47 0.00 0.00 4.35
2171 3962 2.432300 TAGCGCAGGACCTAAGGCC 61.432 63.158 11.47 0.00 0.00 5.19
2172 3963 4.096003 GCGCAGGACCTAAGGCCA 62.096 66.667 5.01 0.00 0.00 5.36
2173 3964 2.668632 CGCAGGACCTAAGGCCAA 59.331 61.111 5.01 0.00 0.00 4.52
2174 3965 1.745489 CGCAGGACCTAAGGCCAAC 60.745 63.158 5.01 0.00 0.00 3.77
2175 3966 1.685820 GCAGGACCTAAGGCCAACT 59.314 57.895 5.01 0.00 0.00 3.16
2176 3967 0.393132 GCAGGACCTAAGGCCAACTC 60.393 60.000 5.01 0.00 0.00 3.01
2177 3968 0.253327 CAGGACCTAAGGCCAACTCC 59.747 60.000 5.01 0.71 0.00 3.85
2178 3969 0.178873 AGGACCTAAGGCCAACTCCA 60.179 55.000 5.01 0.00 0.00 3.86
2179 3970 0.035343 GGACCTAAGGCCAACTCCAC 60.035 60.000 5.01 0.00 0.00 4.02
2180 3971 0.984995 GACCTAAGGCCAACTCCACT 59.015 55.000 5.01 0.00 0.00 4.00
2181 3972 0.693049 ACCTAAGGCCAACTCCACTG 59.307 55.000 5.01 0.00 0.00 3.66
2182 3973 0.678048 CCTAAGGCCAACTCCACTGC 60.678 60.000 5.01 0.00 0.00 4.40
2183 3974 0.036732 CTAAGGCCAACTCCACTGCA 59.963 55.000 5.01 0.00 0.00 4.41
2184 3975 0.250727 TAAGGCCAACTCCACTGCAC 60.251 55.000 5.01 0.00 0.00 4.57
2185 3976 3.357079 GGCCAACTCCACTGCACG 61.357 66.667 0.00 0.00 0.00 5.34
2186 3977 2.280797 GCCAACTCCACTGCACGA 60.281 61.111 0.00 0.00 0.00 4.35
2187 3978 1.672356 GCCAACTCCACTGCACGAT 60.672 57.895 0.00 0.00 0.00 3.73
2188 3979 1.639298 GCCAACTCCACTGCACGATC 61.639 60.000 0.00 0.00 0.00 3.69
2189 3980 1.021390 CCAACTCCACTGCACGATCC 61.021 60.000 0.00 0.00 0.00 3.36
2190 3981 1.021390 CAACTCCACTGCACGATCCC 61.021 60.000 0.00 0.00 0.00 3.85
2191 3982 1.480212 AACTCCACTGCACGATCCCA 61.480 55.000 0.00 0.00 0.00 4.37
2192 3983 1.296392 CTCCACTGCACGATCCCAA 59.704 57.895 0.00 0.00 0.00 4.12
2193 3984 0.742281 CTCCACTGCACGATCCCAAG 60.742 60.000 0.00 0.00 0.00 3.61
2194 3985 2.401766 CCACTGCACGATCCCAAGC 61.402 63.158 0.00 0.00 0.00 4.01
2195 3986 2.434884 ACTGCACGATCCCAAGCG 60.435 61.111 0.00 0.00 40.92 4.68
2196 3987 3.197790 CTGCACGATCCCAAGCGG 61.198 66.667 0.00 0.00 38.99 5.52
2198 3989 3.195698 GCACGATCCCAAGCGGAC 61.196 66.667 0.00 0.00 46.09 4.79
2199 3990 2.885644 CACGATCCCAAGCGGACG 60.886 66.667 0.00 0.00 46.09 4.79
2200 3991 3.379445 ACGATCCCAAGCGGACGT 61.379 61.111 0.00 0.00 46.09 4.34
2201 3992 2.582498 CGATCCCAAGCGGACGTC 60.582 66.667 7.13 7.13 46.09 4.34
2202 3993 2.202892 GATCCCAAGCGGACGTCC 60.203 66.667 25.28 25.28 46.09 4.79
2213 4004 2.231820 GGACGTCCGTTTTGTCTGG 58.768 57.895 20.85 0.00 33.21 3.86
2214 4005 0.249573 GGACGTCCGTTTTGTCTGGA 60.250 55.000 20.85 0.00 33.21 3.86
2215 4006 1.607251 GGACGTCCGTTTTGTCTGGAT 60.607 52.381 20.85 0.00 33.63 3.41
2216 4007 2.140717 GACGTCCGTTTTGTCTGGATT 58.859 47.619 3.51 0.00 33.63 3.01
2217 4008 2.546789 GACGTCCGTTTTGTCTGGATTT 59.453 45.455 3.51 0.00 33.63 2.17
2218 4009 2.546789 ACGTCCGTTTTGTCTGGATTTC 59.453 45.455 0.00 0.00 33.63 2.17
2219 4010 2.411031 CGTCCGTTTTGTCTGGATTTCG 60.411 50.000 0.00 0.00 33.63 3.46
2220 4011 2.546789 GTCCGTTTTGTCTGGATTTCGT 59.453 45.455 0.00 0.00 33.63 3.85
2221 4012 2.803956 TCCGTTTTGTCTGGATTTCGTC 59.196 45.455 0.00 0.00 0.00 4.20
2230 4021 3.236604 GGATTTCGTCCGTTTGGGA 57.763 52.632 0.00 0.00 44.68 4.37
2239 4030 1.832883 TCCGTTTGGGATGACAATGG 58.167 50.000 0.00 0.00 40.94 3.16
2240 4031 0.817013 CCGTTTGGGATGACAATGGG 59.183 55.000 0.00 0.00 38.47 4.00
2241 4032 0.817013 CGTTTGGGATGACAATGGGG 59.183 55.000 0.00 0.00 0.00 4.96
2242 4033 1.615651 CGTTTGGGATGACAATGGGGA 60.616 52.381 0.00 0.00 0.00 4.81
2243 4034 2.750814 GTTTGGGATGACAATGGGGAT 58.249 47.619 0.00 0.00 0.00 3.85
2244 4035 2.431782 GTTTGGGATGACAATGGGGATG 59.568 50.000 0.00 0.00 0.00 3.51
2245 4036 1.606026 TGGGATGACAATGGGGATGA 58.394 50.000 0.00 0.00 0.00 2.92
2246 4037 1.928785 TGGGATGACAATGGGGATGAA 59.071 47.619 0.00 0.00 0.00 2.57
2247 4038 2.314247 TGGGATGACAATGGGGATGAAA 59.686 45.455 0.00 0.00 0.00 2.69
2248 4039 3.245911 TGGGATGACAATGGGGATGAAAA 60.246 43.478 0.00 0.00 0.00 2.29
2249 4040 3.132824 GGGATGACAATGGGGATGAAAAC 59.867 47.826 0.00 0.00 0.00 2.43
2250 4041 3.768757 GGATGACAATGGGGATGAAAACA 59.231 43.478 0.00 0.00 0.00 2.83
2251 4042 4.142093 GGATGACAATGGGGATGAAAACAG 60.142 45.833 0.00 0.00 0.00 3.16
2252 4043 4.111255 TGACAATGGGGATGAAAACAGA 57.889 40.909 0.00 0.00 0.00 3.41
2253 4044 3.826157 TGACAATGGGGATGAAAACAGAC 59.174 43.478 0.00 0.00 0.00 3.51
2254 4045 3.826157 GACAATGGGGATGAAAACAGACA 59.174 43.478 0.00 0.00 0.00 3.41
2255 4046 4.419282 ACAATGGGGATGAAAACAGACAT 58.581 39.130 0.00 0.00 0.00 3.06
2256 4047 4.221262 ACAATGGGGATGAAAACAGACATG 59.779 41.667 0.00 0.00 0.00 3.21
2257 4048 3.524095 TGGGGATGAAAACAGACATGT 57.476 42.857 0.00 0.00 43.15 3.21
2258 4049 4.649267 TGGGGATGAAAACAGACATGTA 57.351 40.909 0.00 0.00 39.29 2.29
2259 4050 5.191727 TGGGGATGAAAACAGACATGTAT 57.808 39.130 0.00 0.00 39.29 2.29
2260 4051 4.949238 TGGGGATGAAAACAGACATGTATG 59.051 41.667 18.66 18.66 39.29 2.39
2261 4052 4.949856 GGGGATGAAAACAGACATGTATGT 59.050 41.667 20.10 20.10 45.16 2.29
2262 4053 5.418840 GGGGATGAAAACAGACATGTATGTT 59.581 40.000 28.48 28.48 45.68 2.71
2263 4054 6.404734 GGGGATGAAAACAGACATGTATGTTC 60.405 42.308 32.42 23.58 43.31 3.18
2264 4055 6.250819 GGATGAAAACAGACATGTATGTTCG 58.749 40.000 32.42 6.65 43.31 3.95
2265 4056 5.605564 TGAAAACAGACATGTATGTTCGG 57.394 39.130 32.42 9.36 43.31 4.30
2266 4057 4.083537 TGAAAACAGACATGTATGTTCGGC 60.084 41.667 32.42 24.44 43.31 5.54
2267 4058 3.334583 AACAGACATGTATGTTCGGCT 57.665 42.857 28.48 10.58 40.55 5.52
2268 4059 3.334583 ACAGACATGTATGTTCGGCTT 57.665 42.857 20.10 0.00 41.95 4.35
2269 4060 3.002791 ACAGACATGTATGTTCGGCTTG 58.997 45.455 20.10 0.00 41.95 4.01
2270 4061 2.352651 CAGACATGTATGTTCGGCTTGG 59.647 50.000 12.38 0.00 41.95 3.61
2271 4062 1.670811 GACATGTATGTTCGGCTTGGG 59.329 52.381 0.00 0.00 41.95 4.12
2272 4063 1.004277 ACATGTATGTTCGGCTTGGGT 59.996 47.619 0.00 0.00 37.90 4.51
2273 4064 2.091541 CATGTATGTTCGGCTTGGGTT 58.908 47.619 0.00 0.00 0.00 4.11
2274 4065 2.279935 TGTATGTTCGGCTTGGGTTT 57.720 45.000 0.00 0.00 0.00 3.27
2275 4066 1.883275 TGTATGTTCGGCTTGGGTTTG 59.117 47.619 0.00 0.00 0.00 2.93
2276 4067 2.156098 GTATGTTCGGCTTGGGTTTGA 58.844 47.619 0.00 0.00 0.00 2.69
2277 4068 1.247567 ATGTTCGGCTTGGGTTTGAG 58.752 50.000 0.00 0.00 0.00 3.02
2278 4069 0.821711 TGTTCGGCTTGGGTTTGAGG 60.822 55.000 0.00 0.00 0.00 3.86
2279 4070 1.901464 TTCGGCTTGGGTTTGAGGC 60.901 57.895 0.00 0.00 35.32 4.70
2281 4072 4.056125 GGCTTGGGTTTGAGGCGC 62.056 66.667 0.00 0.00 0.00 6.53
2282 4073 4.056125 GCTTGGGTTTGAGGCGCC 62.056 66.667 21.89 21.89 0.00 6.53
2283 4074 3.373565 CTTGGGTTTGAGGCGCCC 61.374 66.667 26.15 15.80 42.64 6.13
2285 4076 4.966787 TGGGTTTGAGGCGCCCAC 62.967 66.667 26.15 18.73 46.59 4.61
2306 4097 4.700365 GGCAGCGCGACCCAAAAC 62.700 66.667 12.10 0.00 0.00 2.43
2308 4099 3.645975 CAGCGCGACCCAAAACGT 61.646 61.111 12.10 0.00 0.00 3.99
2309 4100 3.343421 AGCGCGACCCAAAACGTC 61.343 61.111 12.10 0.00 0.00 4.34
2310 4101 4.379143 GCGCGACCCAAAACGTCC 62.379 66.667 12.10 0.00 0.00 4.79
2311 4102 4.067016 CGCGACCCAAAACGTCCG 62.067 66.667 0.00 0.00 0.00 4.79
2312 4103 4.379143 GCGACCCAAAACGTCCGC 62.379 66.667 0.00 0.00 0.00 5.54
2313 4104 3.719144 CGACCCAAAACGTCCGCC 61.719 66.667 0.00 0.00 0.00 6.13
2314 4105 3.359523 GACCCAAAACGTCCGCCC 61.360 66.667 0.00 0.00 0.00 6.13
2315 4106 4.960866 ACCCAAAACGTCCGCCCC 62.961 66.667 0.00 0.00 0.00 5.80
2687 4478 2.872557 CATTGCCTGCACGTGAGG 59.127 61.111 22.23 22.29 0.00 3.86
2688 4479 1.968017 CATTGCCTGCACGTGAGGT 60.968 57.895 22.23 4.92 32.60 3.85
2697 4488 3.471620 ACGTGAGGTGACCAGCAT 58.528 55.556 3.63 0.00 0.00 3.79
2698 4489 1.293498 ACGTGAGGTGACCAGCATC 59.707 57.895 3.63 0.00 0.00 3.91
2699 4490 1.293179 CGTGAGGTGACCAGCATCA 59.707 57.895 3.63 0.00 0.00 3.07
2700 4491 1.016130 CGTGAGGTGACCAGCATCAC 61.016 60.000 3.63 8.04 46.95 3.06
2756 4547 4.379243 CCGTCTGCTCGCCACCTT 62.379 66.667 0.00 0.00 0.00 3.50
2757 4548 3.114616 CGTCTGCTCGCCACCTTG 61.115 66.667 0.00 0.00 0.00 3.61
2758 4549 3.426568 GTCTGCTCGCCACCTTGC 61.427 66.667 0.00 0.00 0.00 4.01
2759 4550 4.704833 TCTGCTCGCCACCTTGCC 62.705 66.667 0.00 0.00 0.00 4.52
3092 5054 3.957586 CTGCTCACCACCCTGCCA 61.958 66.667 0.00 0.00 0.00 4.92
3212 5212 6.404184 CGGTGTGCAATGAATAGTGGAAATAA 60.404 38.462 0.00 0.00 0.00 1.40
3236 5236 0.621862 GAGAGAAGGGATGGGTGGGT 60.622 60.000 0.00 0.00 0.00 4.51
3237 5237 0.916358 AGAGAAGGGATGGGTGGGTG 60.916 60.000 0.00 0.00 0.00 4.61
3238 5238 1.926426 GAGAAGGGATGGGTGGGTGG 61.926 65.000 0.00 0.00 0.00 4.61
3239 5239 2.946650 AAGGGATGGGTGGGTGGG 60.947 66.667 0.00 0.00 0.00 4.61
3268 5268 3.486383 GTCCCTCAGGTTTCAATGACAA 58.514 45.455 0.00 0.00 0.00 3.18
3320 5320 1.301716 GACAGCAGGGACGCAGAAA 60.302 57.895 0.00 0.00 0.00 2.52
3344 5344 3.777925 CGGCTCGTGTCCGCTTTG 61.778 66.667 7.26 0.00 40.46 2.77
3363 5363 1.566703 TGGACCCAAAGTGAGACCAAA 59.433 47.619 0.00 0.00 0.00 3.28
3368 5368 4.285863 ACCCAAAGTGAGACCAAATTTGA 58.714 39.130 19.86 0.00 35.16 2.69
3370 5370 5.366477 ACCCAAAGTGAGACCAAATTTGATT 59.634 36.000 19.86 5.87 35.16 2.57
3408 5408 1.327156 GGACACGAAACGGACGAAAAA 59.673 47.619 0.00 0.00 34.70 1.94
3410 5410 2.001872 ACACGAAACGGACGAAAAAGT 58.998 42.857 0.00 0.00 34.70 2.66
3417 5417 5.678047 CGAAACGGACGAAAAAGTAAAATGT 59.322 36.000 0.00 0.00 0.00 2.71
3418 5418 6.343616 CGAAACGGACGAAAAAGTAAAATGTG 60.344 38.462 0.00 0.00 0.00 3.21
3419 5419 4.284485 ACGGACGAAAAAGTAAAATGTGC 58.716 39.130 0.00 0.00 0.00 4.57
3420 5420 3.666797 CGGACGAAAAAGTAAAATGTGCC 59.333 43.478 0.00 0.00 0.00 5.01
3421 5421 4.612943 GGACGAAAAAGTAAAATGTGCCA 58.387 39.130 0.00 0.00 0.00 4.92
3422 5422 5.044558 GGACGAAAAAGTAAAATGTGCCAA 58.955 37.500 0.00 0.00 0.00 4.52
3423 5423 5.520649 GGACGAAAAAGTAAAATGTGCCAAA 59.479 36.000 0.00 0.00 0.00 3.28
3424 5424 6.339194 ACGAAAAAGTAAAATGTGCCAAAC 57.661 33.333 0.00 0.00 0.00 2.93
3425 5425 5.004916 ACGAAAAAGTAAAATGTGCCAAACG 59.995 36.000 0.00 0.00 0.00 3.60
3426 5426 5.555443 CGAAAAAGTAAAATGTGCCAAACGG 60.555 40.000 0.00 0.00 0.00 4.44
3427 5427 4.657436 AAAGTAAAATGTGCCAAACGGA 57.343 36.364 0.00 0.00 0.00 4.69
3428 5428 3.636282 AGTAAAATGTGCCAAACGGAC 57.364 42.857 0.00 0.00 0.00 4.79
3429 5429 2.031508 AGTAAAATGTGCCAAACGGACG 60.032 45.455 0.00 0.00 0.00 4.79
3430 5430 0.596341 AAAATGTGCCAAACGGACGC 60.596 50.000 0.00 0.00 0.00 5.19
3431 5431 1.729470 AAATGTGCCAAACGGACGCA 61.729 50.000 0.00 0.00 0.00 5.24
3433 5433 4.322385 GTGCCAAACGGACGCACC 62.322 66.667 7.65 0.00 45.64 5.01
3441 5441 4.973055 CGGACGCACCCGGACAAA 62.973 66.667 0.73 0.00 45.43 2.83
3442 5442 2.592287 GGACGCACCCGGACAAAA 60.592 61.111 0.73 0.00 39.22 2.44
3443 5443 1.969589 GGACGCACCCGGACAAAAT 60.970 57.895 0.73 0.00 39.22 1.82
3444 5444 1.209127 GACGCACCCGGACAAAATG 59.791 57.895 0.73 0.00 39.22 2.32
3445 5445 2.195123 GACGCACCCGGACAAAATGG 62.195 60.000 0.73 0.00 39.22 3.16
3449 5449 4.012138 CCCGGACAAAATGGGGTC 57.988 61.111 0.73 0.00 39.39 4.46
3450 5450 2.043980 CCCGGACAAAATGGGGTCG 61.044 63.158 0.73 0.00 39.39 4.79
3451 5451 1.302993 CCGGACAAAATGGGGTCGT 60.303 57.895 0.00 0.00 34.87 4.34
3452 5452 1.582610 CCGGACAAAATGGGGTCGTG 61.583 60.000 0.00 0.00 34.87 4.35
3453 5453 1.584495 GGACAAAATGGGGTCGTGC 59.416 57.895 0.00 0.00 34.87 5.34
3454 5454 1.209127 GACAAAATGGGGTCGTGCG 59.791 57.895 0.00 0.00 0.00 5.34
3455 5455 2.195123 GACAAAATGGGGTCGTGCGG 62.195 60.000 0.00 0.00 0.00 5.69
3456 5456 2.114411 AAAATGGGGTCGTGCGGT 59.886 55.556 0.00 0.00 0.00 5.68
3457 5457 2.265182 AAAATGGGGTCGTGCGGTG 61.265 57.895 0.00 0.00 0.00 4.94
3458 5458 4.715523 AATGGGGTCGTGCGGTGG 62.716 66.667 0.00 0.00 0.00 4.61
3462 5462 4.309950 GGGTCGTGCGGTGGAGTT 62.310 66.667 0.00 0.00 0.00 3.01
3463 5463 3.041940 GGTCGTGCGGTGGAGTTG 61.042 66.667 0.00 0.00 0.00 3.16
3464 5464 3.041940 GTCGTGCGGTGGAGTTGG 61.042 66.667 0.00 0.00 0.00 3.77
3465 5465 4.980805 TCGTGCGGTGGAGTTGGC 62.981 66.667 0.00 0.00 0.00 4.52
3488 5488 6.147328 GGCCCAACGTTATCTCAATATCTAAC 59.853 42.308 0.00 0.00 0.00 2.34
3495 5503 8.307483 ACGTTATCTCAATATCTAACTCCATGG 58.693 37.037 4.97 4.97 0.00 3.66
3508 5518 2.171448 ACTCCATGGTGTGCCTTATCTC 59.829 50.000 18.45 0.00 35.27 2.75
3580 5591 4.612264 TGCCGATTTACTATTACTCCCC 57.388 45.455 0.00 0.00 0.00 4.81
3603 5614 3.181461 CCCTGAAAGCCATCGTCTTAGAT 60.181 47.826 0.00 0.00 0.00 1.98
3614 5625 7.976734 AGCCATCGTCTTAGATATACATAAAGC 59.023 37.037 0.00 0.00 0.00 3.51
3618 5629 7.303261 TCGTCTTAGATATACATAAAGCCACG 58.697 38.462 0.00 0.00 0.00 4.94
3685 5697 5.385198 ACAAACCTTCAGAACCATATGTGT 58.615 37.500 1.24 0.00 0.00 3.72
3688 5700 7.504238 ACAAACCTTCAGAACCATATGTGTAAA 59.496 33.333 1.24 0.00 0.00 2.01
3785 7118 1.195448 CAGGTCGTGTGAATGACAAGC 59.805 52.381 0.93 0.00 35.91 4.01
3794 7127 0.445436 GAATGACAAGCTGCGACTGG 59.555 55.000 0.00 0.00 0.00 4.00
3858 7191 1.977188 TTATCACTGCTGACGACGTG 58.023 50.000 4.58 0.00 0.00 4.49
3859 7192 0.170339 TATCACTGCTGACGACGTGG 59.830 55.000 4.58 0.00 0.00 4.94
3860 7193 1.806461 ATCACTGCTGACGACGTGGT 61.806 55.000 4.58 1.66 0.00 4.16
3861 7194 1.591594 CACTGCTGACGACGTGGTT 60.592 57.895 4.58 0.00 0.00 3.67
3862 7195 1.143183 ACTGCTGACGACGTGGTTT 59.857 52.632 4.58 0.00 0.00 3.27
3863 7196 0.461339 ACTGCTGACGACGTGGTTTT 60.461 50.000 4.58 0.00 0.00 2.43
3864 7197 0.655733 CTGCTGACGACGTGGTTTTT 59.344 50.000 4.58 0.00 0.00 1.94
3865 7198 0.375454 TGCTGACGACGTGGTTTTTG 59.625 50.000 4.58 0.00 0.00 2.44
3866 7199 0.375803 GCTGACGACGTGGTTTTTGT 59.624 50.000 4.58 0.00 0.00 2.83
3867 7200 1.593933 GCTGACGACGTGGTTTTTGTA 59.406 47.619 4.58 0.00 0.00 2.41
3868 7201 2.222445 GCTGACGACGTGGTTTTTGTAT 59.778 45.455 4.58 0.00 0.00 2.29
3869 7202 3.794536 CTGACGACGTGGTTTTTGTATG 58.205 45.455 4.58 0.00 0.00 2.39
3870 7203 2.544686 TGACGACGTGGTTTTTGTATGG 59.455 45.455 4.58 0.00 0.00 2.74
3871 7204 2.545106 GACGACGTGGTTTTTGTATGGT 59.455 45.455 4.58 0.00 0.00 3.55
3872 7205 2.944349 ACGACGTGGTTTTTGTATGGTT 59.056 40.909 0.00 0.00 0.00 3.67
3873 7206 3.377798 ACGACGTGGTTTTTGTATGGTTT 59.622 39.130 0.00 0.00 0.00 3.27
3874 7207 3.726730 CGACGTGGTTTTTGTATGGTTTG 59.273 43.478 0.00 0.00 0.00 2.93
3875 7208 4.496010 CGACGTGGTTTTTGTATGGTTTGA 60.496 41.667 0.00 0.00 0.00 2.69
3876 7209 5.326200 ACGTGGTTTTTGTATGGTTTGAA 57.674 34.783 0.00 0.00 0.00 2.69
3877 7210 5.344884 ACGTGGTTTTTGTATGGTTTGAAG 58.655 37.500 0.00 0.00 0.00 3.02
3878 7211 5.105675 ACGTGGTTTTTGTATGGTTTGAAGT 60.106 36.000 0.00 0.00 0.00 3.01
4124 7457 0.961019 TTGAGCCTGTCACCATTTGC 59.039 50.000 0.00 0.00 33.71 3.68
4147 7480 2.884012 CAAGTGCCAAACAGGTGATACA 59.116 45.455 0.00 0.00 40.61 2.29
4211 7544 5.068329 TGCAACACAATGGTATTCAGTTTCA 59.932 36.000 0.00 0.00 0.00 2.69
4330 7663 2.097036 CGTGATACTGGTCCCACTGTA 58.903 52.381 0.00 0.00 0.00 2.74
4340 7674 3.255642 TGGTCCCACTGTACGTAACTTAC 59.744 47.826 0.00 0.00 0.00 2.34
4393 7727 7.062322 TGATTTCATGGCTAACATTATCCTGT 58.938 34.615 0.00 0.00 37.84 4.00
4436 7770 3.626930 AGGCGGATCTGATATAGGACTC 58.373 50.000 5.48 0.00 0.00 3.36
4589 7934 2.859526 TTGTGTTCATGCAAAAGCGA 57.140 40.000 0.00 0.00 0.00 4.93
4598 7943 5.565592 TCATGCAAAAGCGAAGTTATCAT 57.434 34.783 0.00 0.00 0.00 2.45
4601 7946 6.867816 TCATGCAAAAGCGAAGTTATCATTTT 59.132 30.769 0.00 0.00 30.65 1.82
4653 8046 2.415857 CACTAGCAAAGCAGAGAAGCAG 59.584 50.000 0.00 0.00 36.85 4.24
4688 8081 6.236409 TGAGCAAGAATTTCATGACTTCTCT 58.764 36.000 16.31 11.71 0.00 3.10
4736 8129 6.811665 CCACACGATGATTTAGTAAGTTCTGA 59.188 38.462 0.00 0.00 0.00 3.27
4739 8132 7.432545 ACACGATGATTTAGTAAGTTCTGATCG 59.567 37.037 0.00 0.00 0.00 3.69
4742 8135 6.887376 TGATTTAGTAAGTTCTGATCGTGC 57.113 37.500 0.00 0.00 0.00 5.34
4748 8141 0.247736 AGTTCTGATCGTGCTGTCCC 59.752 55.000 0.00 0.00 0.00 4.46
4820 8213 3.740115 TGCCAAGAAGGTAAAGAGTGAC 58.260 45.455 0.00 0.00 40.61 3.67
4827 8220 7.310734 CCAAGAAGGTAAAGAGTGACTTCCTAT 60.311 40.741 0.00 0.00 38.58 2.57
4836 8229 8.535690 AAAGAGTGACTTCCTATTTTAGAACG 57.464 34.615 0.00 0.00 37.93 3.95
5013 8406 5.205759 TCTGTCATATCGCTGTTGATGAT 57.794 39.130 0.00 0.00 31.35 2.45
5067 8462 3.888934 ACGATTCTGTCACATTTTGCAC 58.111 40.909 0.00 0.00 0.00 4.57
5217 8612 4.939439 GGGACTACACGGTAACAATGAAAT 59.061 41.667 0.00 0.00 0.00 2.17
5218 8613 5.413523 GGGACTACACGGTAACAATGAAATT 59.586 40.000 0.00 0.00 36.63 1.82
5320 8715 2.170607 AGGTGACGAGGATACAAATGGG 59.829 50.000 0.00 0.00 41.41 4.00
5356 8751 0.388520 GCTGTTTCATCAAACCCGGC 60.389 55.000 0.00 0.00 41.25 6.13
5377 8772 2.600420 CGTGATTCTCTTGTCATGGACG 59.400 50.000 0.00 0.00 34.95 4.79
5440 8835 1.340889 CTATCAGCTCTCACTCAGGCC 59.659 57.143 0.00 0.00 0.00 5.19
5452 8847 2.813474 CAGGCCGTCGATGCGAAA 60.813 61.111 0.00 0.00 37.72 3.46
5570 8965 2.419574 GCTACGCTTCATGGGTCCTTTA 60.420 50.000 0.00 0.00 42.13 1.85
5613 9008 0.823356 AACATGGGGCAGTGTGTGAC 60.823 55.000 0.00 0.00 0.00 3.67
5670 9065 1.356124 AGAGATTGGCCGCCTCATAT 58.644 50.000 11.61 0.00 0.00 1.78
5685 9080 4.141711 GCCTCATATGTGAACTTCTACCCA 60.142 45.833 6.35 0.00 33.05 4.51
5691 9086 2.301870 TGTGAACTTCTACCCAGCGAAT 59.698 45.455 0.00 0.00 0.00 3.34
5733 9128 0.468226 TTGGCGATAAGAAGCGGGAT 59.532 50.000 0.00 0.00 34.37 3.85
5736 9131 1.140816 GCGATAAGAAGCGGGATGAC 58.859 55.000 0.00 0.00 34.37 3.06
5743 9138 3.296709 AAGCGGGATGACGAAGCGT 62.297 57.895 0.00 0.00 45.10 5.07
5754 9149 2.022129 CGAAGCGTGCGAGGTTCTT 61.022 57.895 17.09 0.00 43.96 2.52
5763 9158 0.320771 GCGAGGTTCTTCAGAAGGCA 60.321 55.000 10.42 0.00 34.27 4.75
5774 9169 2.910199 TCAGAAGGCATTTCCTGATCG 58.090 47.619 0.00 0.00 46.94 3.69
5804 9208 3.251004 AGTCTTGTCGCCTCAAAATTCAC 59.749 43.478 0.00 0.00 0.00 3.18
5825 9229 1.229428 CATCCGTGTTGCTCTTGTGT 58.771 50.000 0.00 0.00 0.00 3.72
5829 9233 0.316442 CGTGTTGCTCTTGTGTGCTG 60.316 55.000 0.00 0.00 34.18 4.41
5854 9258 1.888215 AGCAGTGACTGTTGGATGTG 58.112 50.000 14.82 0.00 33.43 3.21
6099 9505 2.793278 ATCGGTTGCACTTTGAAACC 57.207 45.000 6.03 6.03 40.02 3.27
6199 9618 3.239102 TGCATTCGCATTCGCATTC 57.761 47.368 0.00 0.00 45.36 2.67
6200 9619 0.248580 TGCATTCGCATTCGCATTCC 60.249 50.000 0.00 0.00 45.36 3.01
6243 9662 5.022787 CCCATGGGAAAGGACTAAATTCAA 58.977 41.667 28.27 0.00 37.50 2.69
6254 9673 4.499696 GGACTAAATTCAATCGGCCAATGG 60.500 45.833 2.24 0.00 0.00 3.16
6274 9693 2.667874 TGCTTTGCATCGGTCGCA 60.668 55.556 0.00 0.00 37.68 5.10
6279 9698 4.545706 TGCATCGGTCGCATCCCC 62.546 66.667 0.00 0.00 33.55 4.81
6281 9700 2.280389 CATCGGTCGCATCCCCTG 60.280 66.667 0.00 0.00 0.00 4.45
6308 9727 2.231820 GTGTACTGCACGTCAACCC 58.768 57.895 0.00 0.00 38.45 4.11
6324 9743 2.032965 ACCCCACACACTACCATACA 57.967 50.000 0.00 0.00 0.00 2.29
6331 9750 2.167693 ACACACTACCATACACCATCGG 59.832 50.000 0.00 0.00 0.00 4.18
6338 9757 1.134098 CCATACACCATCGGCCTCTTT 60.134 52.381 0.00 0.00 0.00 2.52
6345 9764 2.284190 CCATCGGCCTCTTTCTCTTTC 58.716 52.381 0.00 0.00 0.00 2.62
6351 9770 1.075536 GCCTCTTTCTCTTTCCCCCAA 59.924 52.381 0.00 0.00 0.00 4.12
6352 9771 2.490902 GCCTCTTTCTCTTTCCCCCAAA 60.491 50.000 0.00 0.00 0.00 3.28
6353 9772 3.819388 GCCTCTTTCTCTTTCCCCCAAAT 60.819 47.826 0.00 0.00 0.00 2.32
6354 9773 4.569865 GCCTCTTTCTCTTTCCCCCAAATA 60.570 45.833 0.00 0.00 0.00 1.40
6355 9774 5.196695 CCTCTTTCTCTTTCCCCCAAATAG 58.803 45.833 0.00 0.00 0.00 1.73
6356 9775 4.600062 TCTTTCTCTTTCCCCCAAATAGC 58.400 43.478 0.00 0.00 0.00 2.97
6357 9776 4.292306 TCTTTCTCTTTCCCCCAAATAGCT 59.708 41.667 0.00 0.00 0.00 3.32
6358 9777 3.933861 TCTCTTTCCCCCAAATAGCTC 57.066 47.619 0.00 0.00 0.00 4.09
6359 9778 2.509964 TCTCTTTCCCCCAAATAGCTCC 59.490 50.000 0.00 0.00 0.00 4.70
6360 9779 2.242196 CTCTTTCCCCCAAATAGCTCCA 59.758 50.000 0.00 0.00 0.00 3.86
6361 9780 2.858768 TCTTTCCCCCAAATAGCTCCAT 59.141 45.455 0.00 0.00 0.00 3.41
6362 9781 3.117512 TCTTTCCCCCAAATAGCTCCATC 60.118 47.826 0.00 0.00 0.00 3.51
6363 9782 2.212752 TCCCCCAAATAGCTCCATCT 57.787 50.000 0.00 0.00 0.00 2.90
6364 9783 2.057922 TCCCCCAAATAGCTCCATCTC 58.942 52.381 0.00 0.00 0.00 2.75
6365 9784 2.061061 CCCCCAAATAGCTCCATCTCT 58.939 52.381 0.00 0.00 0.00 3.10
6366 9785 2.039613 CCCCCAAATAGCTCCATCTCTC 59.960 54.545 0.00 0.00 0.00 3.20
6367 9786 2.289320 CCCCAAATAGCTCCATCTCTCG 60.289 54.545 0.00 0.00 0.00 4.04
6368 9787 2.366916 CCCAAATAGCTCCATCTCTCGT 59.633 50.000 0.00 0.00 0.00 4.18
6369 9788 3.574396 CCCAAATAGCTCCATCTCTCGTA 59.426 47.826 0.00 0.00 0.00 3.43
6370 9789 4.321601 CCCAAATAGCTCCATCTCTCGTAG 60.322 50.000 0.00 0.00 0.00 3.51
6371 9790 4.321601 CCAAATAGCTCCATCTCTCGTAGG 60.322 50.000 0.00 0.00 0.00 3.18
6372 9791 3.799432 ATAGCTCCATCTCTCGTAGGT 57.201 47.619 0.00 0.00 0.00 3.08
6373 9792 4.912317 ATAGCTCCATCTCTCGTAGGTA 57.088 45.455 0.00 0.00 0.00 3.08
6374 9793 3.134574 AGCTCCATCTCTCGTAGGTAG 57.865 52.381 0.00 0.00 0.00 3.18
6375 9794 2.156098 GCTCCATCTCTCGTAGGTAGG 58.844 57.143 0.00 0.00 0.00 3.18
6376 9795 2.785562 CTCCATCTCTCGTAGGTAGGG 58.214 57.143 0.00 0.00 0.00 3.53
6377 9796 2.372504 CTCCATCTCTCGTAGGTAGGGA 59.627 54.545 0.00 0.00 0.00 4.20
6378 9797 2.987437 TCCATCTCTCGTAGGTAGGGAT 59.013 50.000 0.00 0.00 34.39 3.85
6379 9798 4.173594 TCCATCTCTCGTAGGTAGGGATA 58.826 47.826 0.00 0.00 32.25 2.59
6380 9799 4.019501 TCCATCTCTCGTAGGTAGGGATAC 60.020 50.000 0.00 0.00 32.25 2.24
6393 9812 3.842869 GGATACCGGATGCAGGATC 57.157 57.895 9.46 0.00 0.00 3.36
6394 9813 0.976641 GGATACCGGATGCAGGATCA 59.023 55.000 9.46 0.00 31.91 2.92
6395 9814 1.347707 GGATACCGGATGCAGGATCAA 59.652 52.381 9.46 0.00 31.91 2.57
6396 9815 2.417719 GATACCGGATGCAGGATCAAC 58.582 52.381 9.46 0.00 31.91 3.18
6397 9816 0.104120 TACCGGATGCAGGATCAACG 59.896 55.000 9.46 0.00 31.91 4.10
6398 9817 1.889105 CCGGATGCAGGATCAACGG 60.889 63.158 0.00 4.84 35.41 4.44
6399 9818 1.143838 CGGATGCAGGATCAACGGA 59.856 57.895 4.07 0.00 31.91 4.69
6400 9819 1.154205 CGGATGCAGGATCAACGGAC 61.154 60.000 4.07 0.00 31.91 4.79
6401 9820 0.107703 GGATGCAGGATCAACGGACA 60.108 55.000 4.07 0.00 31.91 4.02
6402 9821 1.475751 GGATGCAGGATCAACGGACAT 60.476 52.381 4.07 0.00 31.91 3.06
6403 9822 1.869767 GATGCAGGATCAACGGACATC 59.130 52.381 0.00 0.00 0.00 3.06
6404 9823 0.107703 TGCAGGATCAACGGACATCC 60.108 55.000 0.00 1.49 39.24 3.51
6405 9824 0.107703 GCAGGATCAACGGACATCCA 60.108 55.000 10.41 0.00 41.16 3.41
6406 9825 1.475751 GCAGGATCAACGGACATCCAT 60.476 52.381 10.41 0.00 41.16 3.41
6407 9826 2.923121 CAGGATCAACGGACATCCATT 58.077 47.619 10.41 0.00 41.16 3.16
6408 9827 2.874701 CAGGATCAACGGACATCCATTC 59.125 50.000 10.41 0.00 41.16 2.67
6414 9833 5.414789 TCAACGGACATCCATTCTCTTAA 57.585 39.130 0.00 0.00 35.14 1.85
6495 9915 3.243724 TGGTGATTTTTAAACCCTGGGG 58.756 45.455 18.88 7.87 42.03 4.96
6515 9936 2.283173 GACCAAGGCCCCAACCAG 60.283 66.667 0.00 0.00 0.00 4.00
6583 10007 0.320374 ACTTGATCGTTCCCGCTTCA 59.680 50.000 0.00 0.00 0.00 3.02
6587 10012 1.804151 TGATCGTTCCCGCTTCAAAAG 59.196 47.619 0.00 0.00 0.00 2.27
6646 10078 0.875908 TCAGTGTCACAGTTCAGCGC 60.876 55.000 0.00 0.00 0.00 5.92
6647 10079 1.143838 AGTGTCACAGTTCAGCGCA 59.856 52.632 11.47 0.00 0.00 6.09
6696 10158 1.007336 GCATCAAACGTCGAGGTCGT 61.007 55.000 11.73 2.01 43.45 4.34
6765 10248 4.994471 CTGTGCTGCTGGGCGTCA 62.994 66.667 0.00 0.00 34.52 4.35
6778 10261 0.597637 GGCGTCACGGAGGTATCATG 60.598 60.000 0.00 0.00 0.00 3.07
6819 10319 1.046472 TGGTGTCGGTGTTGGAGTCT 61.046 55.000 0.00 0.00 0.00 3.24
6820 10320 0.106149 GGTGTCGGTGTTGGAGTCTT 59.894 55.000 0.00 0.00 0.00 3.01
6904 10405 2.125229 CTGGAGCATGTCAGCGCT 60.125 61.111 2.64 2.64 42.42 5.92
6925 10426 1.180029 CCCATCAAGAAAGCCAGGTG 58.820 55.000 0.00 0.00 0.00 4.00
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
82 83 2.026262 AGGGGGTTACATCACATGACAC 60.026 50.000 0.00 0.00 0.00 3.67
172 176 0.310854 CAAAAGGCCTTTCTCGCGTT 59.689 50.000 30.49 10.87 35.96 4.84
216 220 1.374560 TCGTAATGATGTTTGCGGGG 58.625 50.000 0.00 0.00 35.73 5.73
243 247 8.210946 TGGTCAGGAAACTCGAAATTCATATAT 58.789 33.333 10.86 0.00 40.21 0.86
262 266 1.811558 CGCTTGGGATATGTGGTCAGG 60.812 57.143 0.00 0.00 0.00 3.86
265 269 0.180406 ACCGCTTGGGATATGTGGTC 59.820 55.000 0.00 0.00 41.91 4.02
360 365 0.037590 AGGCCACATTTTCTGCGGTA 59.962 50.000 5.01 0.00 29.15 4.02
364 369 2.298729 TGGTTAAGGCCACATTTTCTGC 59.701 45.455 5.01 0.00 32.81 4.26
374 379 0.400213 CACAGGAGTGGTTAAGGCCA 59.600 55.000 5.01 0.00 42.13 5.36
437 451 7.988028 ACTTAAACTCTGATGGGCTAAGAATAC 59.012 37.037 0.00 0.00 0.00 1.89
469 483 8.891671 AATACAAGCATCAATGTCAAGTTTTT 57.108 26.923 0.00 0.00 0.00 1.94
470 484 8.362639 AGAATACAAGCATCAATGTCAAGTTTT 58.637 29.630 0.00 0.00 0.00 2.43
471 485 7.889469 AGAATACAAGCATCAATGTCAAGTTT 58.111 30.769 0.00 0.00 0.00 2.66
472 486 7.458409 AGAATACAAGCATCAATGTCAAGTT 57.542 32.000 0.00 0.00 0.00 2.66
523 537 2.684374 TCCTACTGAACGCGCATAGTTA 59.316 45.455 5.73 0.00 31.14 2.24
525 539 1.065701 CTCCTACTGAACGCGCATAGT 59.934 52.381 5.73 10.60 0.00 2.12
579 594 9.458727 ACATCATCTTAAGATTGACAAAGTCAT 57.541 29.630 19.47 2.53 42.40 3.06
595 610 3.836365 TTGATCCGGCACATCATCTTA 57.164 42.857 5.24 0.00 30.26 2.10
628 643 8.995220 GTAAACACACACATTACCTCTATGAAA 58.005 33.333 0.00 0.00 0.00 2.69
629 644 8.151596 TGTAAACACACACATTACCTCTATGAA 58.848 33.333 0.00 0.00 0.00 2.57
642 657 4.907879 TGAATGCATGTAAACACACACA 57.092 36.364 0.00 0.00 0.00 3.72
646 661 7.040823 TCACACTTATGAATGCATGTAAACACA 60.041 33.333 0.00 0.00 35.94 3.72
647 662 7.304735 TCACACTTATGAATGCATGTAAACAC 58.695 34.615 0.00 0.00 35.94 3.32
650 665 7.686438 ACTCACACTTATGAATGCATGTAAA 57.314 32.000 0.00 0.00 35.94 2.01
655 670 6.146184 GCGTATACTCACACTTATGAATGCAT 59.854 38.462 0.00 0.00 38.54 3.96
666 681 2.082231 ACAGACGCGTATACTCACACT 58.918 47.619 13.97 0.00 0.00 3.55
675 690 6.709145 TTTTAACACAATACAGACGCGTAT 57.291 33.333 13.97 5.94 33.43 3.06
777 2368 1.034838 TTTTGTTGGCGCACTGGAGT 61.035 50.000 10.83 0.00 0.00 3.85
808 2400 1.473258 TGCAAAGATTCCCCGGAATG 58.527 50.000 13.71 2.34 43.98 2.67
852 2444 2.252072 TTACTGATGCGTGGGCCCTC 62.252 60.000 25.70 19.74 38.85 4.30
853 2445 2.297895 TTACTGATGCGTGGGCCCT 61.298 57.895 25.70 0.15 38.85 5.19
952 2550 0.806492 GAAAGATCGTGAGGCGGACC 60.806 60.000 0.00 0.00 41.72 4.46
954 2552 1.138883 CGAAAGATCGTGAGGCGGA 59.861 57.895 0.00 0.00 44.06 5.54
980 2578 2.441035 GAAAGGGAAGGGTGGGGTGG 62.441 65.000 0.00 0.00 0.00 4.61
1008 2607 1.727511 TTATGTACGACGCGGGGGAG 61.728 60.000 12.47 0.00 0.00 4.30
1015 2614 0.300789 GGCTGCTTTATGTACGACGC 59.699 55.000 0.00 0.00 0.00 5.19
1017 2616 1.587034 GACGGCTGCTTTATGTACGAC 59.413 52.381 0.00 0.00 0.00 4.34
1018 2617 1.796253 CGACGGCTGCTTTATGTACGA 60.796 52.381 0.00 0.00 0.00 3.43
1019 2618 0.570734 CGACGGCTGCTTTATGTACG 59.429 55.000 0.00 0.00 0.00 3.67
1041 2640 1.403687 GCTGGGGAGAATAGCCTCGT 61.404 60.000 0.00 0.00 34.08 4.18
1049 2657 2.207501 CTGCTGGTGCTGGGGAGAAT 62.208 60.000 0.00 0.00 40.48 2.40
1051 2659 3.324930 CTGCTGGTGCTGGGGAGA 61.325 66.667 0.00 0.00 40.48 3.71
1072 2680 2.444388 TGAGGATGGAGAATGGAATGGG 59.556 50.000 0.00 0.00 0.00 4.00
1109 2717 5.059833 GCCAAACCTAGATTGATTCGATCT 58.940 41.667 18.34 18.34 38.13 2.75
1117 2725 2.418746 GCTCTCGCCAAACCTAGATTGA 60.419 50.000 9.13 0.00 0.00 2.57
1148 2760 2.122189 CCATCCTCCTCCCCTCCC 60.122 72.222 0.00 0.00 0.00 4.30
1149 2761 1.768077 CACCATCCTCCTCCCCTCC 60.768 68.421 0.00 0.00 0.00 4.30
1150 2762 0.326618 TTCACCATCCTCCTCCCCTC 60.327 60.000 0.00 0.00 0.00 4.30
1151 2763 0.327000 CTTCACCATCCTCCTCCCCT 60.327 60.000 0.00 0.00 0.00 4.79
1152 2764 1.348775 CCTTCACCATCCTCCTCCCC 61.349 65.000 0.00 0.00 0.00 4.81
1153 2765 1.988982 GCCTTCACCATCCTCCTCCC 61.989 65.000 0.00 0.00 0.00 4.30
1154 2766 1.529309 GCCTTCACCATCCTCCTCC 59.471 63.158 0.00 0.00 0.00 4.30
1155 2767 1.274703 TGGCCTTCACCATCCTCCTC 61.275 60.000 3.32 0.00 33.75 3.71
1156 2768 1.229951 TGGCCTTCACCATCCTCCT 60.230 57.895 3.32 0.00 33.75 3.69
1157 2769 3.415186 TGGCCTTCACCATCCTCC 58.585 61.111 3.32 0.00 33.75 4.30
1182 2808 2.109799 CTCATCTTCGCCGGGCAT 59.890 61.111 20.71 1.22 0.00 4.40
1263 2889 2.727071 GGGAGGGAGGGAGGGATGA 61.727 68.421 0.00 0.00 0.00 2.92
1275 2901 4.256278 ATAGGGGGCGAGGGAGGG 62.256 72.222 0.00 0.00 0.00 4.30
1304 2930 2.211761 GAAGACGAAGAACGCCACGC 62.212 60.000 0.00 0.00 46.94 5.34
1309 2935 1.710013 TGGATGAAGACGAAGAACGC 58.290 50.000 0.00 0.00 46.94 4.84
1328 2954 1.828331 GCGTGACGAGCGGAAAAGTT 61.828 55.000 10.10 0.00 0.00 2.66
1373 3004 7.381678 GCATTTCTATAACCAGAACTACTACGG 59.618 40.741 0.00 0.00 34.31 4.02
1380 3011 6.485171 ACCAAGCATTTCTATAACCAGAACT 58.515 36.000 0.00 0.00 34.31 3.01
1431 3071 4.589675 AAACCTCGCCGGCCCAAA 62.590 61.111 23.46 2.73 35.61 3.28
1478 3118 2.860293 GCAGAAGCTACGCGCAAA 59.140 55.556 5.73 0.00 42.61 3.68
1524 3164 2.902419 CGCAAACATGTGCACGGGA 61.902 57.895 13.13 0.00 45.19 5.14
1593 3233 8.311836 TCAGGTAGGAGTAGTATTTCTTTGTTG 58.688 37.037 0.00 0.00 0.00 3.33
1609 3249 4.274459 GCATATTTGCTTGTCAGGTAGGAG 59.726 45.833 0.35 0.00 45.77 3.69
1610 3250 4.199310 GCATATTTGCTTGTCAGGTAGGA 58.801 43.478 0.35 0.00 45.77 2.94
1611 3251 4.558538 GCATATTTGCTTGTCAGGTAGG 57.441 45.455 0.35 0.00 45.77 3.18
1671 3349 1.577328 GCTCACATTGTGACACGGGG 61.577 60.000 15.41 6.29 37.67 5.73
1751 3431 1.202976 ACTTTGGCAACTGCTCCTGAT 60.203 47.619 0.00 0.00 41.70 2.90
1753 3433 1.035139 AACTTTGGCAACTGCTCCTG 58.965 50.000 0.00 0.00 41.70 3.86
1790 3470 4.224818 ACTGGAGAAGGAAGGAATCTTGAG 59.775 45.833 0.00 0.00 32.52 3.02
1855 3628 5.344743 TGGTGGTTGAGTGCAAATAAAAA 57.655 34.783 0.00 0.00 35.42 1.94
1914 3693 7.118680 GGAGAACATGTTTCGTTGGAATAGTTA 59.881 37.037 13.36 0.00 30.88 2.24
2049 3833 9.878667 GTCATGTCTAGTCTCTAGTGCTATATA 57.121 37.037 0.00 0.00 0.00 0.86
2050 3834 7.547722 CGTCATGTCTAGTCTCTAGTGCTATAT 59.452 40.741 0.00 0.00 0.00 0.86
2051 3835 6.869388 CGTCATGTCTAGTCTCTAGTGCTATA 59.131 42.308 0.00 0.00 0.00 1.31
2076 3860 2.171003 CAACAAGGGGGAGGAATTGTC 58.829 52.381 0.00 0.00 34.92 3.18
2113 3902 6.538742 AGACATATACAGCTGTAAAATTGCGT 59.461 34.615 29.26 18.20 33.76 5.24
2121 3910 6.317893 TCGAACAGAGACATATACAGCTGTAA 59.682 38.462 29.26 18.46 35.73 2.41
2138 3929 1.467543 GCGCTACATGACTCGAACAGA 60.468 52.381 0.00 0.00 0.00 3.41
2148 3939 1.409064 CTTAGGTCCTGCGCTACATGA 59.591 52.381 9.73 0.00 0.00 3.07
2157 3948 0.393132 GAGTTGGCCTTAGGTCCTGC 60.393 60.000 3.32 0.00 0.00 4.85
2168 3959 3.357079 CGTGCAGTGGAGTTGGCC 61.357 66.667 0.00 0.00 0.00 5.36
2169 3960 1.639298 GATCGTGCAGTGGAGTTGGC 61.639 60.000 0.00 0.00 0.00 4.52
2170 3961 1.021390 GGATCGTGCAGTGGAGTTGG 61.021 60.000 0.00 0.00 0.00 3.77
2171 3962 1.021390 GGGATCGTGCAGTGGAGTTG 61.021 60.000 0.00 0.00 0.00 3.16
2172 3963 1.296715 GGGATCGTGCAGTGGAGTT 59.703 57.895 0.00 0.00 0.00 3.01
2173 3964 1.480212 TTGGGATCGTGCAGTGGAGT 61.480 55.000 0.00 0.00 0.00 3.85
2174 3965 0.742281 CTTGGGATCGTGCAGTGGAG 60.742 60.000 0.00 0.00 0.00 3.86
2175 3966 1.296392 CTTGGGATCGTGCAGTGGA 59.704 57.895 0.00 0.00 0.00 4.02
2176 3967 2.401766 GCTTGGGATCGTGCAGTGG 61.402 63.158 0.00 0.00 0.00 4.00
2177 3968 2.743752 CGCTTGGGATCGTGCAGTG 61.744 63.158 0.00 0.00 0.00 3.66
2178 3969 2.434884 CGCTTGGGATCGTGCAGT 60.435 61.111 0.00 0.00 0.00 4.40
2179 3970 3.197790 CCGCTTGGGATCGTGCAG 61.198 66.667 0.00 0.00 38.47 4.41
2180 3971 3.700970 TCCGCTTGGGATCGTGCA 61.701 61.111 0.00 0.00 40.94 4.57
2195 3986 0.249573 TCCAGACAAAACGGACGTCC 60.250 55.000 25.28 25.28 0.00 4.79
2196 3987 1.792006 ATCCAGACAAAACGGACGTC 58.208 50.000 7.13 7.13 0.00 4.34
2197 3988 2.249844 AATCCAGACAAAACGGACGT 57.750 45.000 0.00 0.00 0.00 4.34
2198 3989 2.411031 CGAAATCCAGACAAAACGGACG 60.411 50.000 0.00 0.00 0.00 4.79
2199 3990 2.546789 ACGAAATCCAGACAAAACGGAC 59.453 45.455 0.00 0.00 0.00 4.79
2200 3991 2.803956 GACGAAATCCAGACAAAACGGA 59.196 45.455 0.00 0.00 0.00 4.69
2201 3992 3.183237 GACGAAATCCAGACAAAACGG 57.817 47.619 0.00 0.00 0.00 4.44
2212 4003 1.400494 CATCCCAAACGGACGAAATCC 59.600 52.381 0.00 0.00 46.09 3.01
2213 4004 2.095372 GTCATCCCAAACGGACGAAATC 59.905 50.000 0.00 0.00 46.09 2.17
2214 4005 2.081462 GTCATCCCAAACGGACGAAAT 58.919 47.619 0.00 0.00 46.09 2.17
2215 4006 1.202663 TGTCATCCCAAACGGACGAAA 60.203 47.619 0.00 0.00 46.09 3.46
2216 4007 0.393448 TGTCATCCCAAACGGACGAA 59.607 50.000 0.00 0.00 46.09 3.85
2217 4008 0.393448 TTGTCATCCCAAACGGACGA 59.607 50.000 0.00 0.00 46.09 4.20
2218 4009 1.130373 CATTGTCATCCCAAACGGACG 59.870 52.381 0.00 0.00 46.09 4.79
2219 4010 1.472480 CCATTGTCATCCCAAACGGAC 59.528 52.381 0.00 0.00 46.09 4.79
2221 4012 0.817013 CCCATTGTCATCCCAAACGG 59.183 55.000 0.00 0.00 0.00 4.44
2222 4013 0.817013 CCCCATTGTCATCCCAAACG 59.183 55.000 0.00 0.00 0.00 3.60
2223 4014 2.230130 TCCCCATTGTCATCCCAAAC 57.770 50.000 0.00 0.00 0.00 2.93
2224 4015 2.314247 TCATCCCCATTGTCATCCCAAA 59.686 45.455 0.00 0.00 0.00 3.28
2225 4016 1.928785 TCATCCCCATTGTCATCCCAA 59.071 47.619 0.00 0.00 0.00 4.12
2226 4017 1.606026 TCATCCCCATTGTCATCCCA 58.394 50.000 0.00 0.00 0.00 4.37
2227 4018 2.754012 TTCATCCCCATTGTCATCCC 57.246 50.000 0.00 0.00 0.00 3.85
2228 4019 3.768757 TGTTTTCATCCCCATTGTCATCC 59.231 43.478 0.00 0.00 0.00 3.51
2229 4020 4.706476 TCTGTTTTCATCCCCATTGTCATC 59.294 41.667 0.00 0.00 0.00 2.92
2230 4021 4.463891 GTCTGTTTTCATCCCCATTGTCAT 59.536 41.667 0.00 0.00 0.00 3.06
2231 4022 3.826157 GTCTGTTTTCATCCCCATTGTCA 59.174 43.478 0.00 0.00 0.00 3.58
2232 4023 3.826157 TGTCTGTTTTCATCCCCATTGTC 59.174 43.478 0.00 0.00 0.00 3.18
2233 4024 3.843422 TGTCTGTTTTCATCCCCATTGT 58.157 40.909 0.00 0.00 0.00 2.71
2234 4025 4.221262 ACATGTCTGTTTTCATCCCCATTG 59.779 41.667 0.00 0.00 28.70 2.82
2235 4026 4.419282 ACATGTCTGTTTTCATCCCCATT 58.581 39.130 0.00 0.00 28.70 3.16
2236 4027 4.051661 ACATGTCTGTTTTCATCCCCAT 57.948 40.909 0.00 0.00 28.70 4.00
2237 4028 3.524095 ACATGTCTGTTTTCATCCCCA 57.476 42.857 0.00 0.00 28.70 4.96
2238 4029 4.949856 ACATACATGTCTGTTTTCATCCCC 59.050 41.667 10.85 0.00 35.87 4.81
2239 4030 6.515272 AACATACATGTCTGTTTTCATCCC 57.485 37.500 20.45 0.00 40.80 3.85
2240 4031 6.250819 CGAACATACATGTCTGTTTTCATCC 58.749 40.000 25.08 13.47 40.80 3.51
2241 4032 6.250819 CCGAACATACATGTCTGTTTTCATC 58.749 40.000 25.08 14.29 40.80 2.92
2242 4033 5.391950 GCCGAACATACATGTCTGTTTTCAT 60.392 40.000 25.08 7.90 40.80 2.57
2243 4034 4.083537 GCCGAACATACATGTCTGTTTTCA 60.084 41.667 25.08 0.00 40.80 2.69
2244 4035 4.154195 AGCCGAACATACATGTCTGTTTTC 59.846 41.667 25.08 15.46 40.80 2.29
2245 4036 4.072131 AGCCGAACATACATGTCTGTTTT 58.928 39.130 25.08 9.20 40.80 2.43
2246 4037 3.674997 AGCCGAACATACATGTCTGTTT 58.325 40.909 25.08 10.95 40.80 2.83
2247 4038 3.334583 AGCCGAACATACATGTCTGTT 57.665 42.857 24.71 24.71 40.80 3.16
2248 4039 3.002791 CAAGCCGAACATACATGTCTGT 58.997 45.455 10.85 10.85 40.80 3.41
2249 4040 2.352651 CCAAGCCGAACATACATGTCTG 59.647 50.000 0.00 5.48 40.80 3.51
2250 4041 2.632377 CCAAGCCGAACATACATGTCT 58.368 47.619 0.00 0.00 40.80 3.41
2251 4042 1.670811 CCCAAGCCGAACATACATGTC 59.329 52.381 0.00 0.00 40.80 3.06
2252 4043 1.004277 ACCCAAGCCGAACATACATGT 59.996 47.619 2.69 2.69 44.20 3.21
2253 4044 1.750193 ACCCAAGCCGAACATACATG 58.250 50.000 0.00 0.00 0.00 3.21
2254 4045 2.491693 CAAACCCAAGCCGAACATACAT 59.508 45.455 0.00 0.00 0.00 2.29
2255 4046 1.883275 CAAACCCAAGCCGAACATACA 59.117 47.619 0.00 0.00 0.00 2.29
2256 4047 2.156098 TCAAACCCAAGCCGAACATAC 58.844 47.619 0.00 0.00 0.00 2.39
2257 4048 2.432444 CTCAAACCCAAGCCGAACATA 58.568 47.619 0.00 0.00 0.00 2.29
2258 4049 1.247567 CTCAAACCCAAGCCGAACAT 58.752 50.000 0.00 0.00 0.00 2.71
2259 4050 0.821711 CCTCAAACCCAAGCCGAACA 60.822 55.000 0.00 0.00 0.00 3.18
2260 4051 1.956802 CCTCAAACCCAAGCCGAAC 59.043 57.895 0.00 0.00 0.00 3.95
2261 4052 1.901464 GCCTCAAACCCAAGCCGAA 60.901 57.895 0.00 0.00 0.00 4.30
2262 4053 2.282180 GCCTCAAACCCAAGCCGA 60.282 61.111 0.00 0.00 0.00 5.54
2263 4054 3.737172 CGCCTCAAACCCAAGCCG 61.737 66.667 0.00 0.00 0.00 5.52
2264 4055 4.056125 GCGCCTCAAACCCAAGCC 62.056 66.667 0.00 0.00 0.00 4.35
2265 4056 4.056125 GGCGCCTCAAACCCAAGC 62.056 66.667 22.15 0.00 0.00 4.01
2266 4057 3.373565 GGGCGCCTCAAACCCAAG 61.374 66.667 28.56 0.00 43.64 3.61
2289 4080 4.700365 GTTTTGGGTCGCGCTGCC 62.700 66.667 5.56 7.25 0.00 4.85
2291 4082 3.573489 GACGTTTTGGGTCGCGCTG 62.573 63.158 5.56 0.00 0.00 5.18
2292 4083 3.343421 GACGTTTTGGGTCGCGCT 61.343 61.111 5.56 0.00 0.00 5.92
2293 4084 4.379143 GGACGTTTTGGGTCGCGC 62.379 66.667 0.00 0.00 35.24 6.86
2294 4085 4.067016 CGGACGTTTTGGGTCGCG 62.067 66.667 0.00 0.00 35.24 5.87
2295 4086 4.379143 GCGGACGTTTTGGGTCGC 62.379 66.667 0.00 0.00 35.24 5.19
2296 4087 3.719144 GGCGGACGTTTTGGGTCG 61.719 66.667 0.00 0.00 35.24 4.79
2297 4088 3.359523 GGGCGGACGTTTTGGGTC 61.360 66.667 0.00 0.00 0.00 4.46
2298 4089 4.960866 GGGGCGGACGTTTTGGGT 62.961 66.667 0.00 0.00 0.00 4.51
2670 4461 1.968017 ACCTCACGTGCAGGCAATG 60.968 57.895 24.90 9.15 33.84 2.82
2671 4462 1.968017 CACCTCACGTGCAGGCAAT 60.968 57.895 24.90 10.36 35.18 3.56
2672 4463 2.591429 CACCTCACGTGCAGGCAA 60.591 61.111 24.90 3.51 35.18 4.52
2673 4464 3.545574 TCACCTCACGTGCAGGCA 61.546 61.111 24.90 14.36 42.69 4.75
2674 4465 3.044305 GTCACCTCACGTGCAGGC 61.044 66.667 24.90 11.76 42.69 4.85
2675 4466 2.357517 GGTCACCTCACGTGCAGG 60.358 66.667 23.93 23.93 42.69 4.85
2676 4467 1.665916 CTGGTCACCTCACGTGCAG 60.666 63.158 11.67 9.24 42.69 4.41
2677 4468 2.421314 CTGGTCACCTCACGTGCA 59.579 61.111 11.67 0.00 42.69 4.57
2678 4469 3.044305 GCTGGTCACCTCACGTGC 61.044 66.667 11.67 0.00 42.69 5.34
2679 4470 1.004560 ATGCTGGTCACCTCACGTG 60.005 57.895 9.94 9.94 44.50 4.49
2680 4471 1.293498 GATGCTGGTCACCTCACGT 59.707 57.895 0.00 0.00 0.00 4.49
2681 4472 1.016130 GTGATGCTGGTCACCTCACG 61.016 60.000 0.00 0.00 42.04 4.35
2682 4473 1.016130 CGTGATGCTGGTCACCTCAC 61.016 60.000 4.20 4.20 44.37 3.51
2683 4474 1.293179 CGTGATGCTGGTCACCTCA 59.707 57.895 0.00 0.00 44.37 3.86
2684 4475 2.103042 GCGTGATGCTGGTCACCTC 61.103 63.158 0.00 0.00 44.37 3.85
2685 4476 2.046892 GCGTGATGCTGGTCACCT 60.047 61.111 0.00 0.00 44.37 4.00
2695 4486 4.457496 AGCCCGTGGAGCGTGATG 62.457 66.667 0.00 0.00 39.32 3.07
2696 4487 4.148825 GAGCCCGTGGAGCGTGAT 62.149 66.667 0.00 0.00 39.32 3.06
2739 4530 4.379243 AAGGTGGCGAGCAGACGG 62.379 66.667 0.00 0.00 0.00 4.79
2740 4531 3.114616 CAAGGTGGCGAGCAGACG 61.115 66.667 0.00 0.00 0.00 4.18
2741 4532 3.426568 GCAAGGTGGCGAGCAGAC 61.427 66.667 0.00 0.00 0.00 3.51
2742 4533 4.704833 GGCAAGGTGGCGAGCAGA 62.705 66.667 0.00 0.00 31.79 4.26
3212 5212 1.367848 ACCCATCCCTTCTCTCTCCTT 59.632 52.381 0.00 0.00 0.00 3.36
3268 5268 1.681666 CACATGAGTCTGGCCCACT 59.318 57.895 0.00 1.16 0.00 4.00
3320 5320 2.355481 GACACGAGCCGGACGTTT 60.355 61.111 20.96 16.35 42.07 3.60
3344 5344 2.358322 TTTGGTCTCACTTTGGGTCC 57.642 50.000 0.00 0.00 0.00 4.46
3346 5346 4.285863 TCAAATTTGGTCTCACTTTGGGT 58.714 39.130 17.90 0.00 31.70 4.51
3353 5353 6.808008 TCTCTGAATCAAATTTGGTCTCAC 57.192 37.500 17.90 4.96 0.00 3.51
3354 5354 6.376299 CCATCTCTGAATCAAATTTGGTCTCA 59.624 38.462 17.90 14.71 0.00 3.27
3363 5363 4.868172 TCACCCCATCTCTGAATCAAAT 57.132 40.909 0.00 0.00 0.00 2.32
3368 5368 2.356125 CCGTTTCACCCCATCTCTGAAT 60.356 50.000 0.00 0.00 0.00 2.57
3370 5370 0.613260 CCGTTTCACCCCATCTCTGA 59.387 55.000 0.00 0.00 0.00 3.27
3408 5408 2.031508 CGTCCGTTTGGCACATTTTACT 60.032 45.455 0.00 0.00 39.30 2.24
3410 5410 1.335142 GCGTCCGTTTGGCACATTTTA 60.335 47.619 0.00 0.00 39.30 1.52
3425 5425 1.969589 ATTTTGTCCGGGTGCGTCC 60.970 57.895 0.00 0.00 0.00 4.79
3426 5426 1.209127 CATTTTGTCCGGGTGCGTC 59.791 57.895 0.00 0.00 0.00 5.19
3427 5427 2.265182 CCATTTTGTCCGGGTGCGT 61.265 57.895 0.00 0.00 0.00 5.24
3428 5428 2.566010 CCATTTTGTCCGGGTGCG 59.434 61.111 0.00 0.00 0.00 5.34
3429 5429 2.645192 CCCCATTTTGTCCGGGTGC 61.645 63.158 0.00 0.00 38.40 5.01
3430 5430 3.693411 CCCCATTTTGTCCGGGTG 58.307 61.111 0.00 0.00 38.40 4.61
3431 5431 3.267733 ACCCCATTTTGTCCGGGT 58.732 55.556 0.00 0.00 44.24 5.28
3432 5432 2.043980 CGACCCCATTTTGTCCGGG 61.044 63.158 0.00 0.00 41.71 5.73
3433 5433 1.302993 ACGACCCCATTTTGTCCGG 60.303 57.895 0.00 0.00 0.00 5.14
3434 5434 1.873165 CACGACCCCATTTTGTCCG 59.127 57.895 0.00 0.00 0.00 4.79
3435 5435 1.584495 GCACGACCCCATTTTGTCC 59.416 57.895 0.00 0.00 0.00 4.02
3436 5436 1.209127 CGCACGACCCCATTTTGTC 59.791 57.895 0.00 0.00 0.00 3.18
3437 5437 2.265182 CCGCACGACCCCATTTTGT 61.265 57.895 0.00 0.00 0.00 2.83
3438 5438 2.265182 ACCGCACGACCCCATTTTG 61.265 57.895 0.00 0.00 0.00 2.44
3439 5439 2.114411 ACCGCACGACCCCATTTT 59.886 55.556 0.00 0.00 0.00 1.82
3440 5440 2.671619 CACCGCACGACCCCATTT 60.672 61.111 0.00 0.00 0.00 2.32
3441 5441 4.715523 CCACCGCACGACCCCATT 62.716 66.667 0.00 0.00 0.00 3.16
3445 5445 4.309950 AACTCCACCGCACGACCC 62.310 66.667 0.00 0.00 0.00 4.46
3446 5446 3.041940 CAACTCCACCGCACGACC 61.042 66.667 0.00 0.00 0.00 4.79
3447 5447 3.041940 CCAACTCCACCGCACGAC 61.042 66.667 0.00 0.00 0.00 4.34
3448 5448 4.980805 GCCAACTCCACCGCACGA 62.981 66.667 0.00 0.00 0.00 4.35
3452 5452 4.966787 TTGGGCCAACTCCACCGC 62.967 66.667 16.66 0.00 33.43 5.68
3453 5453 2.983592 GTTGGGCCAACTCCACCG 60.984 66.667 36.16 0.00 40.73 4.94
3454 5454 2.983592 CGTTGGGCCAACTCCACC 60.984 66.667 38.24 18.15 41.62 4.61
3455 5455 0.535553 TAACGTTGGGCCAACTCCAC 60.536 55.000 38.24 19.79 41.62 4.02
3456 5456 0.402504 ATAACGTTGGGCCAACTCCA 59.597 50.000 38.24 25.76 41.62 3.86
3457 5457 1.092348 GATAACGTTGGGCCAACTCC 58.908 55.000 38.24 22.01 41.62 3.85
3458 5458 2.007608 GAGATAACGTTGGGCCAACTC 58.992 52.381 38.24 29.97 41.62 3.01
3459 5459 1.349688 TGAGATAACGTTGGGCCAACT 59.650 47.619 38.24 26.88 41.62 3.16
3460 5460 1.816074 TGAGATAACGTTGGGCCAAC 58.184 50.000 34.43 34.43 40.54 3.77
3461 5461 2.570415 TTGAGATAACGTTGGGCCAA 57.430 45.000 16.66 16.66 0.00 4.52
3462 5462 2.799126 ATTGAGATAACGTTGGGCCA 57.201 45.000 11.99 0.00 0.00 5.36
3463 5463 4.642429 AGATATTGAGATAACGTTGGGCC 58.358 43.478 11.99 0.00 0.00 5.80
3464 5464 6.929606 AGTTAGATATTGAGATAACGTTGGGC 59.070 38.462 11.99 0.00 34.17 5.36
3465 5465 7.599245 GGAGTTAGATATTGAGATAACGTTGGG 59.401 40.741 11.99 0.00 34.17 4.12
3466 5466 8.141909 TGGAGTTAGATATTGAGATAACGTTGG 58.858 37.037 11.99 0.00 34.17 3.77
3467 5467 9.698309 ATGGAGTTAGATATTGAGATAACGTTG 57.302 33.333 11.99 0.00 34.17 4.10
3488 5488 2.437281 AGAGATAAGGCACACCATGGAG 59.563 50.000 21.47 14.24 39.06 3.86
3495 5503 6.595716 ACTGAAATTACAGAGATAAGGCACAC 59.404 38.462 0.00 0.00 40.63 3.82
3580 5591 0.035056 AAGACGATGGCTTTCAGGGG 60.035 55.000 0.00 0.00 0.00 4.79
3592 5603 7.968956 CGTGGCTTTATGTATATCTAAGACGAT 59.031 37.037 0.00 0.00 0.00 3.73
3614 5625 8.964420 ATGACAGTAAAATAATGAAAACGTGG 57.036 30.769 0.00 0.00 0.00 4.94
3659 5671 7.040686 ACACATATGGTTCTGAAGGTTTGTAAC 60.041 37.037 7.80 0.00 0.00 2.50
3729 5741 2.035193 TCGCTGCATGCTTTTAAAACCA 59.965 40.909 20.33 0.00 40.11 3.67
3785 7118 6.791887 ACAAATATCATTATCCAGTCGCAG 57.208 37.500 0.00 0.00 0.00 5.18
3858 7191 9.705290 ATGAATACTTCAAACCATACAAAAACC 57.295 29.630 0.00 0.00 43.95 3.27
4124 7457 1.299316 CACCTGTTTGGCACTTGCG 60.299 57.895 0.00 0.00 43.26 4.85
4147 7480 6.936900 AGTTTACAGCATAGTTCATGTGAAGT 59.063 34.615 8.07 8.07 40.50 3.01
4424 7758 2.863809 TGCTCTGCGAGTCCTATATCA 58.136 47.619 7.27 0.00 31.39 2.15
4436 7770 0.247814 CCGCTATTGTTTGCTCTGCG 60.248 55.000 0.00 0.00 41.30 5.18
4601 7946 7.093945 CCAGGCCTTCTATAGCTTTTGTAAAAA 60.094 37.037 0.00 0.00 0.00 1.94
4620 8013 1.303643 GCTAGTGCAAACCAGGCCT 60.304 57.895 0.00 0.00 39.41 5.19
4688 8081 6.667848 TGGAGAAGGTGATTAGACATTGACTA 59.332 38.462 0.00 0.00 0.00 2.59
4736 8129 4.457496 CCTGCGGGACAGCACGAT 62.457 66.667 5.28 0.00 45.89 3.73
4748 8141 4.742201 CCACCACCGAGTCCTGCG 62.742 72.222 0.00 0.00 0.00 5.18
4820 8213 8.943909 ATACCAGTTCGTTCTAAAATAGGAAG 57.056 34.615 0.00 0.00 0.00 3.46
4827 8220 8.441312 ACAAAAGATACCAGTTCGTTCTAAAA 57.559 30.769 0.00 0.00 0.00 1.52
4898 8291 7.106439 TCCTCTCAATCTCAACTATCTGAAC 57.894 40.000 0.00 0.00 0.00 3.18
5067 8462 5.643348 TCTTCTGTTGTAATGCATGTACCTG 59.357 40.000 0.00 0.00 0.00 4.00
5149 8544 5.066593 GTGACTCCAAGAAAATCCTTCAGT 58.933 41.667 0.00 0.00 0.00 3.41
5283 8678 7.333423 CCTCGTCACCTAGAAAATCATTACAAA 59.667 37.037 0.00 0.00 0.00 2.83
5305 8700 2.575532 ACATGCCCATTTGTATCCTCG 58.424 47.619 0.00 0.00 0.00 4.63
5320 8715 6.145858 TGAAACAGCATAAATTGTCAACATGC 59.854 34.615 15.76 15.76 41.78 4.06
5356 8751 2.600420 CGTCCATGACAAGAGAATCACG 59.400 50.000 0.00 0.00 32.22 4.35
5377 8772 1.226603 CGGGTCGTTCTCGTCATCC 60.227 63.158 0.00 0.00 38.33 3.51
5410 8805 2.167281 GAGAGCTGATAGTGCCTTCACA 59.833 50.000 0.00 0.00 45.49 3.58
5440 8835 3.913573 CGCCCTTTCGCATCGACG 61.914 66.667 0.00 0.00 34.89 5.12
5452 8847 2.136878 CACCTCTATCTGCCGCCCT 61.137 63.158 0.00 0.00 0.00 5.19
5570 8965 2.783135 AGTGGTTGAAATCAGCGTCAT 58.217 42.857 0.00 0.00 0.00 3.06
5613 9008 0.245539 CAGCATGCCCCTGAAAACAG 59.754 55.000 15.66 0.00 32.03 3.16
5670 9065 1.334160 TCGCTGGGTAGAAGTTCACA 58.666 50.000 5.50 0.00 0.00 3.58
5685 9080 0.036952 CTATGATCCCGCCATTCGCT 60.037 55.000 0.00 0.00 36.73 4.93
5709 9104 1.531883 CGCTTCTTATCGCCAAAAGCC 60.532 52.381 0.00 0.00 39.26 4.35
5712 9107 1.091537 CCCGCTTCTTATCGCCAAAA 58.908 50.000 0.00 0.00 0.00 2.44
5715 9110 0.249868 CATCCCGCTTCTTATCGCCA 60.250 55.000 0.00 0.00 0.00 5.69
5733 9128 3.493830 AACCTCGCACGCTTCGTCA 62.494 57.895 0.00 0.00 38.32 4.35
5736 9131 1.945776 GAAGAACCTCGCACGCTTCG 61.946 60.000 0.00 0.00 0.00 3.79
5743 9138 0.320771 GCCTTCTGAAGAACCTCGCA 60.321 55.000 18.68 0.00 0.00 5.10
5763 9158 4.712337 AGACTAACCTCACGATCAGGAAAT 59.288 41.667 4.64 0.00 34.75 2.17
5774 9169 1.272769 AGGCGACAAGACTAACCTCAC 59.727 52.381 0.00 0.00 35.53 3.51
5829 9233 1.002033 CCAACAGTCACTGCTTGCTTC 60.002 52.381 4.13 0.00 34.37 3.86
5854 9258 3.729163 GCGCTCATACTGCCTTTTCTTTC 60.729 47.826 0.00 0.00 0.00 2.62
6099 9505 2.971428 ATCTATTGGCCCGCGACACG 62.971 60.000 8.23 0.00 43.15 4.49
6101 9507 1.227527 CATCTATTGGCCCGCGACA 60.228 57.895 8.23 0.00 0.00 4.35
6212 9631 1.891722 CTTTCCCATGGGGCAAGCAC 61.892 60.000 30.93 0.00 39.05 4.40
6222 9641 6.460123 CCGATTGAATTTAGTCCTTTCCCATG 60.460 42.308 0.00 0.00 0.00 3.66
6234 9653 3.383761 GCCATTGGCCGATTGAATTTAG 58.616 45.455 17.28 0.00 44.06 1.85
6257 9676 1.980951 GATGCGACCGATGCAAAGCA 61.981 55.000 0.00 0.00 46.87 3.91
6265 9684 4.241555 GCAGGGGATGCGACCGAT 62.242 66.667 0.00 0.00 46.99 4.18
6279 9698 2.029288 CAGTACACGTGGCTGGCAG 61.029 63.158 25.21 10.94 0.00 4.85
6281 9700 3.423154 GCAGTACACGTGGCTGGC 61.423 66.667 30.04 22.27 0.00 4.85
6283 9702 3.244105 GTGCAGTACACGTGGCTG 58.756 61.111 27.23 27.23 40.07 4.85
6293 9712 1.070105 GTGGGGTTGACGTGCAGTA 59.930 57.895 0.00 0.00 0.00 2.74
6302 9721 1.440618 ATGGTAGTGTGTGGGGTTGA 58.559 50.000 0.00 0.00 0.00 3.18
6308 9727 3.531538 GATGGTGTATGGTAGTGTGTGG 58.468 50.000 0.00 0.00 0.00 4.17
6324 9743 1.280457 AAGAGAAAGAGGCCGATGGT 58.720 50.000 0.00 0.00 0.00 3.55
6331 9750 0.698818 TGGGGGAAAGAGAAAGAGGC 59.301 55.000 0.00 0.00 0.00 4.70
6338 9757 2.509964 GGAGCTATTTGGGGGAAAGAGA 59.490 50.000 0.00 0.00 35.24 3.10
6345 9764 2.039613 GAGAGATGGAGCTATTTGGGGG 59.960 54.545 0.00 0.00 0.00 5.40
6351 9770 4.107127 ACCTACGAGAGATGGAGCTATT 57.893 45.455 0.00 0.00 0.00 1.73
6352 9771 3.799432 ACCTACGAGAGATGGAGCTAT 57.201 47.619 0.00 0.00 0.00 2.97
6353 9772 3.008157 CCTACCTACGAGAGATGGAGCTA 59.992 52.174 0.00 0.00 0.00 3.32
6354 9773 2.224670 CCTACCTACGAGAGATGGAGCT 60.225 54.545 0.00 0.00 0.00 4.09
6355 9774 2.156098 CCTACCTACGAGAGATGGAGC 58.844 57.143 0.00 0.00 0.00 4.70
6356 9775 2.372504 TCCCTACCTACGAGAGATGGAG 59.627 54.545 0.00 0.00 0.00 3.86
6357 9776 2.415624 TCCCTACCTACGAGAGATGGA 58.584 52.381 0.00 0.00 0.00 3.41
6358 9777 2.953284 TCCCTACCTACGAGAGATGG 57.047 55.000 0.00 0.00 0.00 3.51
6359 9778 4.263435 GGTATCCCTACCTACGAGAGATG 58.737 52.174 0.00 0.00 43.62 2.90
6360 9779 3.055240 CGGTATCCCTACCTACGAGAGAT 60.055 52.174 0.00 0.00 44.63 2.75
6361 9780 2.301296 CGGTATCCCTACCTACGAGAGA 59.699 54.545 0.00 0.00 44.63 3.10
6362 9781 2.614987 CCGGTATCCCTACCTACGAGAG 60.615 59.091 0.00 0.00 44.63 3.20
6363 9782 1.349026 CCGGTATCCCTACCTACGAGA 59.651 57.143 0.00 0.00 44.63 4.04
6364 9783 1.349026 TCCGGTATCCCTACCTACGAG 59.651 57.143 0.00 0.00 44.63 4.18
6365 9784 1.434188 TCCGGTATCCCTACCTACGA 58.566 55.000 0.00 0.00 44.63 3.43
6366 9785 2.089980 CATCCGGTATCCCTACCTACG 58.910 57.143 0.00 0.00 44.63 3.51
6367 9786 1.823610 GCATCCGGTATCCCTACCTAC 59.176 57.143 0.00 0.00 44.63 3.18
6368 9787 1.430075 TGCATCCGGTATCCCTACCTA 59.570 52.381 0.00 0.00 44.63 3.08
6369 9788 0.190069 TGCATCCGGTATCCCTACCT 59.810 55.000 0.00 0.00 44.63 3.08
6370 9789 0.608640 CTGCATCCGGTATCCCTACC 59.391 60.000 0.00 0.00 43.55 3.18
6371 9790 0.608640 CCTGCATCCGGTATCCCTAC 59.391 60.000 0.00 0.00 0.00 3.18
6372 9791 0.485543 TCCTGCATCCGGTATCCCTA 59.514 55.000 0.00 0.00 0.00 3.53
6373 9792 0.178891 ATCCTGCATCCGGTATCCCT 60.179 55.000 0.00 0.00 0.00 4.20
6374 9793 0.250513 GATCCTGCATCCGGTATCCC 59.749 60.000 0.00 0.00 0.00 3.85
6375 9794 0.976641 TGATCCTGCATCCGGTATCC 59.023 55.000 0.00 0.00 0.00 2.59
6376 9795 2.417719 GTTGATCCTGCATCCGGTATC 58.582 52.381 0.00 0.00 0.00 2.24
6377 9796 1.270305 CGTTGATCCTGCATCCGGTAT 60.270 52.381 0.00 0.00 0.00 2.73
6378 9797 0.104120 CGTTGATCCTGCATCCGGTA 59.896 55.000 0.00 0.00 0.00 4.02
6379 9798 1.153369 CGTTGATCCTGCATCCGGT 60.153 57.895 0.00 0.00 0.00 5.28
6380 9799 1.889105 CCGTTGATCCTGCATCCGG 60.889 63.158 0.00 0.00 32.17 5.14
6381 9800 1.143838 TCCGTTGATCCTGCATCCG 59.856 57.895 0.00 0.00 0.00 4.18
6382 9801 0.107703 TGTCCGTTGATCCTGCATCC 60.108 55.000 0.00 0.00 0.00 3.51
6383 9802 1.869767 GATGTCCGTTGATCCTGCATC 59.130 52.381 0.00 0.00 0.00 3.91
6384 9803 1.475751 GGATGTCCGTTGATCCTGCAT 60.476 52.381 0.00 0.00 36.04 3.96
6385 9804 0.107703 GGATGTCCGTTGATCCTGCA 60.108 55.000 0.00 0.00 36.04 4.41
6386 9805 0.107703 TGGATGTCCGTTGATCCTGC 60.108 55.000 0.00 0.00 39.23 4.85
6387 9806 2.627515 ATGGATGTCCGTTGATCCTG 57.372 50.000 0.00 0.00 39.23 3.86
6388 9807 2.774234 AGAATGGATGTCCGTTGATCCT 59.226 45.455 11.09 0.00 44.80 3.24
6389 9808 3.134458 GAGAATGGATGTCCGTTGATCC 58.866 50.000 11.09 0.00 44.80 3.36
6390 9809 4.065321 AGAGAATGGATGTCCGTTGATC 57.935 45.455 11.09 8.87 44.80 2.92
6391 9810 4.494091 AAGAGAATGGATGTCCGTTGAT 57.506 40.909 11.09 0.28 44.80 2.57
6392 9811 3.981071 AAGAGAATGGATGTCCGTTGA 57.019 42.857 11.09 0.00 44.80 3.18
6393 9812 5.447818 GCTTTAAGAGAATGGATGTCCGTTG 60.448 44.000 11.09 0.00 44.80 4.10
6395 9814 4.192317 GCTTTAAGAGAATGGATGTCCGT 58.808 43.478 0.00 0.00 39.43 4.69
6396 9815 4.191544 TGCTTTAAGAGAATGGATGTCCG 58.808 43.478 0.00 0.00 39.43 4.79
6397 9816 6.060788 AGATGCTTTAAGAGAATGGATGTCC 58.939 40.000 0.00 0.00 0.00 4.02
6398 9817 6.204495 GGAGATGCTTTAAGAGAATGGATGTC 59.796 42.308 0.00 0.00 0.00 3.06
6399 9818 6.060788 GGAGATGCTTTAAGAGAATGGATGT 58.939 40.000 0.00 0.00 0.00 3.06
6400 9819 6.017275 GTGGAGATGCTTTAAGAGAATGGATG 60.017 42.308 0.00 0.00 0.00 3.51
6401 9820 6.060788 GTGGAGATGCTTTAAGAGAATGGAT 58.939 40.000 0.00 0.00 0.00 3.41
6402 9821 5.190528 AGTGGAGATGCTTTAAGAGAATGGA 59.809 40.000 0.00 0.00 0.00 3.41
6403 9822 5.435291 AGTGGAGATGCTTTAAGAGAATGG 58.565 41.667 0.00 0.00 0.00 3.16
6404 9823 5.233902 CGAGTGGAGATGCTTTAAGAGAATG 59.766 44.000 0.00 0.00 0.00 2.67
6405 9824 5.105146 ACGAGTGGAGATGCTTTAAGAGAAT 60.105 40.000 0.00 0.00 0.00 2.40
6406 9825 4.220821 ACGAGTGGAGATGCTTTAAGAGAA 59.779 41.667 0.00 0.00 0.00 2.87
6407 9826 3.764434 ACGAGTGGAGATGCTTTAAGAGA 59.236 43.478 0.00 0.00 0.00 3.10
6408 9827 4.116747 ACGAGTGGAGATGCTTTAAGAG 57.883 45.455 0.00 0.00 0.00 2.85
6414 9833 0.108615 CCGAACGAGTGGAGATGCTT 60.109 55.000 0.00 0.00 0.00 3.91
6469 9888 4.021456 CAGGGTTTAAAAATCACCAGGTCC 60.021 45.833 0.00 0.00 31.50 4.46
6765 10248 1.319541 CCGACTCATGATACCTCCGT 58.680 55.000 0.00 0.00 0.00 4.69
6772 10255 1.758440 GCCCAGCCCGACTCATGATA 61.758 60.000 0.00 0.00 0.00 2.15
6795 10284 2.177580 CAACACCGACACCAACGCT 61.178 57.895 0.00 0.00 0.00 5.07
6803 10292 0.031585 CGAAGACTCCAACACCGACA 59.968 55.000 0.00 0.00 0.00 4.35
6819 10319 3.371034 TCATCCTGAACCAGATACCGAA 58.629 45.455 0.00 0.00 32.44 4.30
6820 10320 2.959030 CTCATCCTGAACCAGATACCGA 59.041 50.000 0.00 0.00 32.44 4.69
6904 10405 0.612732 CCTGGCTTTCTTGATGGGCA 60.613 55.000 0.00 0.00 0.00 5.36
6925 10426 1.606601 GGGGCCAAGAGGAACAACC 60.607 63.158 4.39 0.00 36.89 3.77
7039 10741 1.170290 TCGACAGTGCGAGAAGTGGA 61.170 55.000 5.70 0.00 35.01 4.02


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.