Multiple sequence alignment - TraesCS2B01G341900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G341900 chr2B 100.000 2288 0 0 1 2288 488005687 488003400 0 4226
1 TraesCS2B01G341900 chr2B 96.000 400 16 0 1889 2288 650135608 650135209 0 651
2 TraesCS2B01G341900 chr4D 93.140 1239 77 3 500 1737 116524069 116522838 0 1810
3 TraesCS2B01G341900 chr4D 92.382 1247 84 4 495 1737 493970626 493969387 0 1766
4 TraesCS2B01G341900 chr4D 91.120 1250 97 6 495 1738 421048153 421046912 0 1681
5 TraesCS2B01G341900 chr4D 90.818 501 43 3 1 498 414225534 414226034 0 667
6 TraesCS2B01G341900 chr5B 92.500 1240 93 0 495 1734 375711762 375710523 0 1775
7 TraesCS2B01G341900 chr5B 95.750 400 17 0 1889 2288 594705395 594705794 0 645
8 TraesCS2B01G341900 chr3A 92.536 1246 81 2 495 1734 418765177 418763938 0 1775
9 TraesCS2B01G341900 chr3A 91.717 495 38 3 5 498 418765719 418765227 0 684
10 TraesCS2B01G341900 chr5A 91.926 1251 87 4 495 1739 604231578 604230336 0 1738
11 TraesCS2B01G341900 chr5A 90.982 499 42 3 1 498 392040533 392041029 0 669
12 TraesCS2B01G341900 chr3B 91.997 1237 91 8 495 1731 700810290 700811518 0 1729
13 TraesCS2B01G341900 chr3B 91.413 1246 98 6 495 1734 700799398 700800640 0 1700
14 TraesCS2B01G341900 chr1A 91.633 1243 95 4 495 1734 327011435 327010199 0 1711
15 TraesCS2B01G341900 chr3D 91.365 498 43 0 1 498 575956120 575955623 0 682
16 TraesCS2B01G341900 chr3D 91.218 501 41 2 1 498 593766415 593765915 0 678
17 TraesCS2B01G341900 chr3D 91.000 500 38 6 1 498 515006472 515006966 0 667
18 TraesCS2B01G341900 chr3D 90.619 501 44 3 1 498 449746567 449747067 0 662
19 TraesCS2B01G341900 chr2A 90.964 498 45 0 1 498 779811803 779812300 0 671
20 TraesCS2B01G341900 chr2A 95.750 400 17 0 1889 2288 410616405 410616006 0 645
21 TraesCS2B01G341900 chr2A 95.750 400 17 0 1889 2288 621028552 621028951 0 645
22 TraesCS2B01G341900 chr1D 90.763 498 45 1 1 498 338633522 338634018 0 664
23 TraesCS2B01G341900 chr1B 96.250 400 15 0 1889 2288 649693895 649693496 0 656
24 TraesCS2B01G341900 chr1B 96.000 400 16 0 1889 2288 43113038 43112639 0 651
25 TraesCS2B01G341900 chr7B 96.000 400 16 0 1889 2288 184215857 184216256 0 651
26 TraesCS2B01G341900 chr7B 95.750 400 17 0 1889 2288 741359838 741360237 0 645
27 TraesCS2B01G341900 chr4B 96.000 400 14 1 1889 2288 627551670 627552067 0 649


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G341900 chr2B 488003400 488005687 2287 True 4226.0 4226 100.0000 1 2288 1 chr2B.!!$R1 2287
1 TraesCS2B01G341900 chr4D 116522838 116524069 1231 True 1810.0 1810 93.1400 500 1737 1 chr4D.!!$R1 1237
2 TraesCS2B01G341900 chr4D 493969387 493970626 1239 True 1766.0 1766 92.3820 495 1737 1 chr4D.!!$R3 1242
3 TraesCS2B01G341900 chr4D 421046912 421048153 1241 True 1681.0 1681 91.1200 495 1738 1 chr4D.!!$R2 1243
4 TraesCS2B01G341900 chr4D 414225534 414226034 500 False 667.0 667 90.8180 1 498 1 chr4D.!!$F1 497
5 TraesCS2B01G341900 chr5B 375710523 375711762 1239 True 1775.0 1775 92.5000 495 1734 1 chr5B.!!$R1 1239
6 TraesCS2B01G341900 chr3A 418763938 418765719 1781 True 1229.5 1775 92.1265 5 1734 2 chr3A.!!$R1 1729
7 TraesCS2B01G341900 chr5A 604230336 604231578 1242 True 1738.0 1738 91.9260 495 1739 1 chr5A.!!$R1 1244
8 TraesCS2B01G341900 chr3B 700810290 700811518 1228 False 1729.0 1729 91.9970 495 1731 1 chr3B.!!$F2 1236
9 TraesCS2B01G341900 chr3B 700799398 700800640 1242 False 1700.0 1700 91.4130 495 1734 1 chr3B.!!$F1 1239
10 TraesCS2B01G341900 chr1A 327010199 327011435 1236 True 1711.0 1711 91.6330 495 1734 1 chr1A.!!$R1 1239
11 TraesCS2B01G341900 chr3D 593765915 593766415 500 True 678.0 678 91.2180 1 498 1 chr3D.!!$R2 497
12 TraesCS2B01G341900 chr3D 449746567 449747067 500 False 662.0 662 90.6190 1 498 1 chr3D.!!$F1 497

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
729 809 0.03759 GTGTTGTGCCTGACCCCATA 59.962 55.0 0.0 0.0 0.0 2.74 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2244 2429 0.029035 CGATGTCTACTTCCCCGACG 59.971 60.0 0.0 0.0 0.0 5.12 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
107 108 4.256920 CCTTCATCTTCTTGTCCATCGTT 58.743 43.478 0.00 0.00 0.00 3.85
112 113 1.872952 CTTCTTGTCCATCGTTGTGCA 59.127 47.619 0.00 0.00 0.00 4.57
113 114 1.960417 TCTTGTCCATCGTTGTGCAA 58.040 45.000 0.00 0.00 0.00 4.08
119 120 2.281484 ATCGTTGTGCAAGGCGGT 60.281 55.556 0.00 0.00 0.00 5.68
132 136 4.773117 GCGGTGGGTCGTCGTCTC 62.773 72.222 0.00 0.00 0.00 3.36
133 137 3.054503 CGGTGGGTCGTCGTCTCT 61.055 66.667 0.00 0.00 0.00 3.10
139 143 1.447489 GGTCGTCGTCTCTCTCGGA 60.447 63.158 0.00 0.00 0.00 4.55
161 165 4.012138 TCGAGGTCGATCTGCCAA 57.988 55.556 0.91 0.00 44.22 4.52
170 174 0.098200 CGATCTGCCAAGTACGACGA 59.902 55.000 0.00 0.00 0.00 4.20
180 184 2.034532 TACGACGACCTGGCTCCA 59.965 61.111 0.00 0.00 0.00 3.86
203 207 2.048444 CCTTCACTGGCATATGCACT 57.952 50.000 28.07 7.56 44.36 4.40
223 227 2.169561 CTGGTTCTTCCTCCTCCTTAGC 59.830 54.545 0.00 0.00 37.07 3.09
241 245 3.075005 CTCCCCACCGATGACCGT 61.075 66.667 0.00 0.00 36.31 4.83
242 246 2.605295 TCCCCACCGATGACCGTT 60.605 61.111 0.00 0.00 36.31 4.44
368 372 4.360643 GCCTGATTCATGGCCCAA 57.639 55.556 0.00 0.00 43.11 4.12
389 393 1.935873 CGAATGATGTCGACTGCCATT 59.064 47.619 21.51 21.51 43.86 3.16
414 418 2.092914 CCCTTCGCTGGGTTAAGAATCT 60.093 50.000 4.63 0.00 42.25 2.40
498 555 0.173481 CATGGAGCCGAAGTTCGAGA 59.827 55.000 26.37 5.59 43.74 4.04
599 674 5.044476 AGGTTGATAGTGAGAGAAGAGAGGA 60.044 44.000 0.00 0.00 0.00 3.71
623 700 2.254508 GGGTAAGTAGTGGTGGTCAGT 58.745 52.381 0.00 0.00 0.00 3.41
686 766 5.121768 ACAGTCATGCCGTTTTAACTACATC 59.878 40.000 0.00 0.00 0.00 3.06
724 804 0.179045 ACTCTGTGTTGTGCCTGACC 60.179 55.000 0.00 0.00 0.00 4.02
729 809 0.037590 GTGTTGTGCCTGACCCCATA 59.962 55.000 0.00 0.00 0.00 2.74
763 843 2.659428 TCGAGGAGAGCAATGAGATGA 58.341 47.619 0.00 0.00 0.00 2.92
796 876 0.893270 CCCGGCCATTGACAACAAGA 60.893 55.000 2.24 0.00 39.46 3.02
874 954 1.373246 CCGAAGACGCCAACGGTTA 60.373 57.895 0.00 0.00 46.04 2.85
886 966 1.845809 AACGGTTAGCGACGACGAGT 61.846 55.000 11.70 0.00 42.66 4.18
967 1047 2.162681 GCCCAACTCACTTATGCAAGT 58.837 47.619 0.00 0.00 46.15 3.16
1077 1158 2.282040 AACACTGGCTGCTCCTGC 60.282 61.111 0.00 0.00 37.30 4.85
1160 1241 1.590238 CGCCGTTCATCAGATCAAGAC 59.410 52.381 0.00 0.00 0.00 3.01
1203 1284 1.913762 CCTGACTCCCGACACCCTT 60.914 63.158 0.00 0.00 0.00 3.95
1293 1374 3.798511 GCCAGGGACTAGGGCCAC 61.799 72.222 6.18 0.00 41.13 5.01
1348 1463 6.149640 TGCTTTATGGTTTATGCGTTGAACTA 59.850 34.615 0.00 0.67 0.00 2.24
1438 1574 6.210185 TGATGCTCTATTTATGCTCTGCTCTA 59.790 38.462 0.00 0.00 0.00 2.43
1478 1615 0.595825 GTTGAGCCAAAGTGTGCTGC 60.596 55.000 0.00 0.00 38.11 5.25
1568 1751 2.625790 GGGTTTGTCCACTAACATGCAA 59.374 45.455 0.00 0.00 38.11 4.08
1575 1759 1.401409 CCACTAACATGCAAGCAACCG 60.401 52.381 0.00 0.00 0.00 4.44
1583 1767 1.106351 TGCAAGCAACCGAACACCAT 61.106 50.000 0.00 0.00 0.00 3.55
1601 1785 3.357079 GCAGTGTGGTTCAGCCCG 61.357 66.667 0.00 0.00 36.04 6.13
1683 1867 3.348647 TTGCATAGCCAAGCTGAGTTA 57.651 42.857 0.00 0.00 40.10 2.24
1706 1890 2.581216 AGGCTATGCAATGCAGCTAT 57.419 45.000 14.98 0.00 43.65 2.97
1738 1923 1.153208 AACCAAACACGCCCGTACA 60.153 52.632 0.00 0.00 0.00 2.90
1739 1924 0.747283 AACCAAACACGCCCGTACAA 60.747 50.000 0.00 0.00 0.00 2.41
1740 1925 0.747283 ACCAAACACGCCCGTACAAA 60.747 50.000 0.00 0.00 0.00 2.83
1741 1926 0.317186 CCAAACACGCCCGTACAAAC 60.317 55.000 0.00 0.00 0.00 2.93
1742 1927 0.377554 CAAACACGCCCGTACAAACA 59.622 50.000 0.00 0.00 0.00 2.83
1743 1928 0.377905 AAACACGCCCGTACAAACAC 59.622 50.000 0.00 0.00 0.00 3.32
1744 1929 0.462403 AACACGCCCGTACAAACACT 60.462 50.000 0.00 0.00 0.00 3.55
1745 1930 0.388659 ACACGCCCGTACAAACACTA 59.611 50.000 0.00 0.00 0.00 2.74
1746 1931 1.065358 CACGCCCGTACAAACACTAG 58.935 55.000 0.00 0.00 0.00 2.57
1747 1932 0.668401 ACGCCCGTACAAACACTAGC 60.668 55.000 0.00 0.00 0.00 3.42
1748 1933 0.389426 CGCCCGTACAAACACTAGCT 60.389 55.000 0.00 0.00 0.00 3.32
1749 1934 1.076332 GCCCGTACAAACACTAGCTG 58.924 55.000 0.00 0.00 0.00 4.24
1750 1935 1.076332 CCCGTACAAACACTAGCTGC 58.924 55.000 0.00 0.00 0.00 5.25
1751 1936 1.076332 CCGTACAAACACTAGCTGCC 58.924 55.000 0.00 0.00 0.00 4.85
1752 1937 0.713883 CGTACAAACACTAGCTGCCG 59.286 55.000 0.00 0.00 0.00 5.69
1753 1938 1.076332 GTACAAACACTAGCTGCCGG 58.924 55.000 0.00 0.00 0.00 6.13
1754 1939 0.682852 TACAAACACTAGCTGCCGGT 59.317 50.000 1.90 0.00 0.00 5.28
1755 1940 0.884704 ACAAACACTAGCTGCCGGTG 60.885 55.000 17.09 17.09 37.05 4.94
1756 1941 1.302511 AAACACTAGCTGCCGGTGG 60.303 57.895 20.82 0.00 35.53 4.61
1757 1942 2.748058 AAACACTAGCTGCCGGTGGG 62.748 60.000 20.82 4.11 35.53 4.61
1780 1965 3.548488 CAAACTTTGGGCCAGCCA 58.452 55.556 6.23 0.00 37.98 4.75
1781 1966 1.069596 CAAACTTTGGGCCAGCCAC 59.930 57.895 6.23 0.50 37.98 5.01
1782 1967 1.382420 AAACTTTGGGCCAGCCACA 60.382 52.632 6.23 3.36 37.98 4.17
1783 1968 0.763986 AAACTTTGGGCCAGCCACAT 60.764 50.000 6.23 0.00 37.98 3.21
1784 1969 1.187567 AACTTTGGGCCAGCCACATC 61.188 55.000 6.23 0.00 37.98 3.06
1785 1970 2.283821 TTTGGGCCAGCCACATCC 60.284 61.111 6.23 0.00 37.98 3.51
1786 1971 3.903281 TTTGGGCCAGCCACATCCC 62.903 63.158 6.23 0.00 39.22 3.85
1791 1976 4.100084 CCAGCCACATCCCGCTCA 62.100 66.667 0.00 0.00 31.40 4.26
1792 1977 2.191375 CAGCCACATCCCGCTCAT 59.809 61.111 0.00 0.00 31.40 2.90
1793 1978 1.452651 CAGCCACATCCCGCTCATT 60.453 57.895 0.00 0.00 31.40 2.57
1794 1979 1.153086 AGCCACATCCCGCTCATTC 60.153 57.895 0.00 0.00 0.00 2.67
1795 1980 2.537560 GCCACATCCCGCTCATTCG 61.538 63.158 0.00 0.00 0.00 3.34
1796 1981 1.153369 CCACATCCCGCTCATTCGT 60.153 57.895 0.00 0.00 0.00 3.85
1797 1982 0.744414 CCACATCCCGCTCATTCGTT 60.744 55.000 0.00 0.00 0.00 3.85
1798 1983 1.086696 CACATCCCGCTCATTCGTTT 58.913 50.000 0.00 0.00 0.00 3.60
1799 1984 1.086696 ACATCCCGCTCATTCGTTTG 58.913 50.000 0.00 0.00 0.00 2.93
1800 1985 1.086696 CATCCCGCTCATTCGTTTGT 58.913 50.000 0.00 0.00 0.00 2.83
1801 1986 2.276201 CATCCCGCTCATTCGTTTGTA 58.724 47.619 0.00 0.00 0.00 2.41
1802 1987 2.459060 TCCCGCTCATTCGTTTGTAA 57.541 45.000 0.00 0.00 0.00 2.41
1803 1988 2.980568 TCCCGCTCATTCGTTTGTAAT 58.019 42.857 0.00 0.00 0.00 1.89
1804 1989 2.675844 TCCCGCTCATTCGTTTGTAATG 59.324 45.455 0.00 0.00 35.98 1.90
1805 1990 2.440501 CCGCTCATTCGTTTGTAATGC 58.559 47.619 0.00 0.00 34.89 3.56
1806 1991 2.159585 CCGCTCATTCGTTTGTAATGCA 60.160 45.455 0.00 0.00 34.89 3.96
1807 1992 3.093574 CGCTCATTCGTTTGTAATGCAG 58.906 45.455 0.00 0.00 34.89 4.41
1808 1993 2.848302 GCTCATTCGTTTGTAATGCAGC 59.152 45.455 0.00 0.00 34.89 5.25
1809 1994 3.670359 GCTCATTCGTTTGTAATGCAGCA 60.670 43.478 0.00 0.00 37.40 4.41
1810 1995 4.475028 CTCATTCGTTTGTAATGCAGCAA 58.525 39.130 0.00 0.00 34.89 3.91
1811 1996 5.058149 TCATTCGTTTGTAATGCAGCAAT 57.942 34.783 0.00 0.00 34.89 3.56
1812 1997 5.468592 TCATTCGTTTGTAATGCAGCAATT 58.531 33.333 0.00 0.00 34.89 2.32
1813 1998 5.345472 TCATTCGTTTGTAATGCAGCAATTG 59.655 36.000 0.00 0.00 34.89 2.32
1814 1999 4.235939 TCGTTTGTAATGCAGCAATTGT 57.764 36.364 7.40 0.00 0.00 2.71
1815 2000 4.615949 TCGTTTGTAATGCAGCAATTGTT 58.384 34.783 7.40 0.00 0.00 2.83
1816 2001 5.763088 TCGTTTGTAATGCAGCAATTGTTA 58.237 33.333 7.40 0.00 0.00 2.41
1817 2002 5.855925 TCGTTTGTAATGCAGCAATTGTTAG 59.144 36.000 7.40 0.00 0.00 2.34
1818 2003 5.855925 CGTTTGTAATGCAGCAATTGTTAGA 59.144 36.000 7.40 0.00 0.00 2.10
1819 2004 6.527722 CGTTTGTAATGCAGCAATTGTTAGAT 59.472 34.615 7.40 0.00 0.00 1.98
1820 2005 7.062138 CGTTTGTAATGCAGCAATTGTTAGATT 59.938 33.333 7.40 5.43 0.00 2.40
1821 2006 8.711457 GTTTGTAATGCAGCAATTGTTAGATTT 58.289 29.630 7.40 0.00 0.00 2.17
1822 2007 7.815398 TGTAATGCAGCAATTGTTAGATTTG 57.185 32.000 7.40 0.00 0.00 2.32
1823 2008 6.812656 TGTAATGCAGCAATTGTTAGATTTGG 59.187 34.615 7.40 0.00 0.00 3.28
1824 2009 4.870123 TGCAGCAATTGTTAGATTTGGT 57.130 36.364 7.40 0.00 0.00 3.67
1825 2010 5.973899 TGCAGCAATTGTTAGATTTGGTA 57.026 34.783 7.40 0.00 0.00 3.25
1826 2011 6.528537 TGCAGCAATTGTTAGATTTGGTAT 57.471 33.333 7.40 0.00 0.00 2.73
1827 2012 6.563422 TGCAGCAATTGTTAGATTTGGTATC 58.437 36.000 7.40 0.00 0.00 2.24
1828 2013 5.979517 GCAGCAATTGTTAGATTTGGTATCC 59.020 40.000 7.40 0.00 0.00 2.59
1829 2014 6.405731 GCAGCAATTGTTAGATTTGGTATCCA 60.406 38.462 7.40 0.00 0.00 3.41
1830 2015 7.685155 GCAGCAATTGTTAGATTTGGTATCCAT 60.685 37.037 7.40 0.00 31.53 3.41
1831 2016 7.864379 CAGCAATTGTTAGATTTGGTATCCATC 59.136 37.037 7.40 0.00 31.53 3.51
1832 2017 7.560991 AGCAATTGTTAGATTTGGTATCCATCA 59.439 33.333 7.40 0.00 31.53 3.07
1833 2018 8.362639 GCAATTGTTAGATTTGGTATCCATCAT 58.637 33.333 7.40 0.00 31.53 2.45
1834 2019 9.903682 CAATTGTTAGATTTGGTATCCATCATC 57.096 33.333 0.00 0.00 31.53 2.92
1835 2020 8.641498 ATTGTTAGATTTGGTATCCATCATCC 57.359 34.615 0.00 0.00 31.53 3.51
1836 2021 7.392766 TGTTAGATTTGGTATCCATCATCCT 57.607 36.000 0.00 0.00 31.53 3.24
1837 2022 7.453393 TGTTAGATTTGGTATCCATCATCCTC 58.547 38.462 0.00 0.00 31.53 3.71
1838 2023 7.072328 TGTTAGATTTGGTATCCATCATCCTCA 59.928 37.037 0.00 0.00 31.53 3.86
1839 2024 6.715350 AGATTTGGTATCCATCATCCTCAT 57.285 37.500 0.00 0.00 31.53 2.90
1840 2025 6.719301 AGATTTGGTATCCATCATCCTCATC 58.281 40.000 0.00 0.00 31.53 2.92
1841 2026 4.916041 TTGGTATCCATCATCCTCATCC 57.084 45.455 0.00 0.00 31.53 3.51
1842 2027 3.873062 TGGTATCCATCATCCTCATCCA 58.127 45.455 0.00 0.00 0.00 3.41
1843 2028 3.584406 TGGTATCCATCATCCTCATCCAC 59.416 47.826 0.00 0.00 0.00 4.02
1844 2029 3.584406 GGTATCCATCATCCTCATCCACA 59.416 47.826 0.00 0.00 0.00 4.17
1845 2030 4.226846 GGTATCCATCATCCTCATCCACAT 59.773 45.833 0.00 0.00 0.00 3.21
1846 2031 4.571369 ATCCATCATCCTCATCCACATC 57.429 45.455 0.00 0.00 0.00 3.06
1847 2032 3.595021 TCCATCATCCTCATCCACATCT 58.405 45.455 0.00 0.00 0.00 2.90
1848 2033 3.581770 TCCATCATCCTCATCCACATCTC 59.418 47.826 0.00 0.00 0.00 2.75
1849 2034 3.586892 CATCATCCTCATCCACATCTCG 58.413 50.000 0.00 0.00 0.00 4.04
1850 2035 2.670939 TCATCCTCATCCACATCTCGT 58.329 47.619 0.00 0.00 0.00 4.18
1851 2036 3.033909 TCATCCTCATCCACATCTCGTT 58.966 45.455 0.00 0.00 0.00 3.85
1852 2037 3.452264 TCATCCTCATCCACATCTCGTTT 59.548 43.478 0.00 0.00 0.00 3.60
1853 2038 3.981071 TCCTCATCCACATCTCGTTTT 57.019 42.857 0.00 0.00 0.00 2.43
1854 2039 4.286297 TCCTCATCCACATCTCGTTTTT 57.714 40.909 0.00 0.00 0.00 1.94
1874 2059 3.981071 TTTCTCCATGAAGACATCCGT 57.019 42.857 0.00 0.00 35.89 4.69
1875 2060 3.526931 TTCTCCATGAAGACATCCGTC 57.473 47.619 0.00 0.00 42.95 4.79
1876 2061 2.456577 TCTCCATGAAGACATCCGTCA 58.543 47.619 0.00 0.00 45.23 4.35
1877 2062 2.428530 TCTCCATGAAGACATCCGTCAG 59.571 50.000 0.00 0.00 45.23 3.51
1878 2063 2.428530 CTCCATGAAGACATCCGTCAGA 59.571 50.000 0.00 0.00 45.23 3.27
1879 2064 3.033909 TCCATGAAGACATCCGTCAGAT 58.966 45.455 0.00 0.00 45.23 2.90
1880 2065 3.068732 TCCATGAAGACATCCGTCAGATC 59.931 47.826 0.00 0.00 45.23 2.75
1881 2066 3.069300 CCATGAAGACATCCGTCAGATCT 59.931 47.826 0.00 0.00 45.23 2.75
1882 2067 4.279420 CCATGAAGACATCCGTCAGATCTA 59.721 45.833 0.00 0.00 45.23 1.98
1883 2068 4.902443 TGAAGACATCCGTCAGATCTAC 57.098 45.455 0.00 0.00 45.23 2.59
1884 2069 4.527944 TGAAGACATCCGTCAGATCTACT 58.472 43.478 0.00 0.00 45.23 2.57
1885 2070 4.950475 TGAAGACATCCGTCAGATCTACTT 59.050 41.667 0.00 0.00 45.23 2.24
1886 2071 5.419155 TGAAGACATCCGTCAGATCTACTTT 59.581 40.000 0.00 0.00 45.23 2.66
1887 2072 5.508200 AGACATCCGTCAGATCTACTTTC 57.492 43.478 0.00 0.00 45.23 2.62
1888 2073 5.197451 AGACATCCGTCAGATCTACTTTCT 58.803 41.667 0.00 0.00 45.23 2.52
1889 2074 5.067153 AGACATCCGTCAGATCTACTTTCTG 59.933 44.000 0.00 0.00 45.23 3.02
1890 2075 4.707448 ACATCCGTCAGATCTACTTTCTGT 59.293 41.667 0.00 0.00 41.13 3.41
1891 2076 5.186021 ACATCCGTCAGATCTACTTTCTGTT 59.814 40.000 0.00 0.00 41.13 3.16
1892 2077 5.060662 TCCGTCAGATCTACTTTCTGTTG 57.939 43.478 0.00 0.00 41.13 3.33
1893 2078 4.082190 TCCGTCAGATCTACTTTCTGTTGG 60.082 45.833 0.00 4.68 41.13 3.77
1894 2079 4.082190 CCGTCAGATCTACTTTCTGTTGGA 60.082 45.833 0.00 0.00 41.13 3.53
1895 2080 5.470368 CGTCAGATCTACTTTCTGTTGGAA 58.530 41.667 0.00 0.00 41.13 3.53
1896 2081 5.926542 CGTCAGATCTACTTTCTGTTGGAAA 59.073 40.000 0.00 0.00 41.13 3.13
1897 2082 6.591834 CGTCAGATCTACTTTCTGTTGGAAAT 59.408 38.462 0.00 0.00 42.25 2.17
1898 2083 7.759886 CGTCAGATCTACTTTCTGTTGGAAATA 59.240 37.037 0.00 0.00 42.25 1.40
1899 2084 9.606631 GTCAGATCTACTTTCTGTTGGAAATAT 57.393 33.333 0.00 0.00 42.25 1.28
1900 2085 9.605275 TCAGATCTACTTTCTGTTGGAAATATG 57.395 33.333 0.00 0.00 42.25 1.78
1901 2086 9.605275 CAGATCTACTTTCTGTTGGAAATATGA 57.395 33.333 0.00 0.00 42.25 2.15
1902 2087 9.829507 AGATCTACTTTCTGTTGGAAATATGAG 57.170 33.333 0.00 0.00 42.25 2.90
1903 2088 7.849804 TCTACTTTCTGTTGGAAATATGAGC 57.150 36.000 0.00 0.00 42.25 4.26
1904 2089 7.394016 TCTACTTTCTGTTGGAAATATGAGCA 58.606 34.615 0.00 0.00 42.25 4.26
1905 2090 6.899393 ACTTTCTGTTGGAAATATGAGCAA 57.101 33.333 0.00 0.00 42.25 3.91
1906 2091 7.472334 ACTTTCTGTTGGAAATATGAGCAAT 57.528 32.000 0.00 0.00 42.25 3.56
1907 2092 7.899973 ACTTTCTGTTGGAAATATGAGCAATT 58.100 30.769 0.00 0.00 42.25 2.32
1908 2093 8.370182 ACTTTCTGTTGGAAATATGAGCAATTT 58.630 29.630 0.00 0.00 42.25 1.82
1909 2094 9.859427 CTTTCTGTTGGAAATATGAGCAATTTA 57.141 29.630 0.00 0.00 42.25 1.40
1910 2095 9.638239 TTTCTGTTGGAAATATGAGCAATTTAC 57.362 29.630 0.00 0.00 38.81 2.01
1911 2096 7.771183 TCTGTTGGAAATATGAGCAATTTACC 58.229 34.615 0.00 0.00 0.00 2.85
1912 2097 7.395772 TCTGTTGGAAATATGAGCAATTTACCA 59.604 33.333 0.00 0.00 0.00 3.25
1913 2098 7.901029 TGTTGGAAATATGAGCAATTTACCAA 58.099 30.769 0.00 0.00 34.63 3.67
1914 2099 8.370940 TGTTGGAAATATGAGCAATTTACCAAA 58.629 29.630 0.00 0.00 36.45 3.28
1915 2100 9.382275 GTTGGAAATATGAGCAATTTACCAAAT 57.618 29.630 0.00 0.00 36.45 2.32
1950 2135 7.948278 ACGGAAATACTAGATAAAGCATGAC 57.052 36.000 0.00 0.00 0.00 3.06
1951 2136 7.727181 ACGGAAATACTAGATAAAGCATGACT 58.273 34.615 0.00 0.00 0.00 3.41
1952 2137 8.857098 ACGGAAATACTAGATAAAGCATGACTA 58.143 33.333 0.00 0.00 0.00 2.59
1953 2138 9.692749 CGGAAATACTAGATAAAGCATGACTAA 57.307 33.333 0.00 0.00 0.00 2.24
1991 2176 4.601621 CAAGTCATGCAATCTGACAGAG 57.398 45.455 18.52 6.37 44.37 3.35
1992 2177 4.251268 CAAGTCATGCAATCTGACAGAGA 58.749 43.478 18.52 0.00 44.37 3.10
1993 2178 4.126208 AGTCATGCAATCTGACAGAGAG 57.874 45.455 18.52 6.91 44.37 3.20
1994 2179 3.768215 AGTCATGCAATCTGACAGAGAGA 59.232 43.478 18.52 0.03 44.37 3.10
1995 2180 4.222366 AGTCATGCAATCTGACAGAGAGAA 59.778 41.667 18.52 0.67 44.37 2.87
1996 2181 4.567558 GTCATGCAATCTGACAGAGAGAAG 59.432 45.833 11.52 0.00 42.08 2.85
1997 2182 3.606595 TGCAATCTGACAGAGAGAAGG 57.393 47.619 11.52 0.00 32.80 3.46
1998 2183 2.902486 TGCAATCTGACAGAGAGAAGGT 59.098 45.455 11.52 0.00 32.80 3.50
1999 2184 4.089361 TGCAATCTGACAGAGAGAAGGTA 58.911 43.478 11.52 0.00 32.80 3.08
2000 2185 4.528206 TGCAATCTGACAGAGAGAAGGTAA 59.472 41.667 11.52 0.00 32.80 2.85
2001 2186 5.012046 TGCAATCTGACAGAGAGAAGGTAAA 59.988 40.000 11.52 0.00 32.80 2.01
2002 2187 5.350091 GCAATCTGACAGAGAGAAGGTAAAC 59.650 44.000 11.52 0.00 32.80 2.01
2003 2188 6.459066 CAATCTGACAGAGAGAAGGTAAACA 58.541 40.000 11.52 0.00 32.80 2.83
2004 2189 6.865834 ATCTGACAGAGAGAAGGTAAACAT 57.134 37.500 11.52 0.00 32.80 2.71
2005 2190 6.274157 TCTGACAGAGAGAAGGTAAACATC 57.726 41.667 0.00 0.00 0.00 3.06
2006 2191 5.060662 TGACAGAGAGAAGGTAAACATCG 57.939 43.478 0.00 0.00 0.00 3.84
2007 2192 4.523173 TGACAGAGAGAAGGTAAACATCGT 59.477 41.667 0.00 0.00 0.00 3.73
2008 2193 5.061920 ACAGAGAGAAGGTAAACATCGTC 57.938 43.478 0.00 0.00 0.00 4.20
2009 2194 4.767928 ACAGAGAGAAGGTAAACATCGTCT 59.232 41.667 0.00 0.00 0.00 4.18
2010 2195 5.098893 CAGAGAGAAGGTAAACATCGTCTG 58.901 45.833 0.00 0.00 0.00 3.51
2011 2196 4.767928 AGAGAGAAGGTAAACATCGTCTGT 59.232 41.667 0.00 0.00 40.84 3.41
2012 2197 5.944599 AGAGAGAAGGTAAACATCGTCTGTA 59.055 40.000 0.00 0.00 36.98 2.74
2013 2198 6.603997 AGAGAGAAGGTAAACATCGTCTGTAT 59.396 38.462 0.00 0.00 36.98 2.29
2014 2199 7.774157 AGAGAGAAGGTAAACATCGTCTGTATA 59.226 37.037 0.00 0.00 36.98 1.47
2015 2200 8.466617 AGAGAAGGTAAACATCGTCTGTATAT 57.533 34.615 0.00 0.00 36.98 0.86
2016 2201 9.570468 AGAGAAGGTAAACATCGTCTGTATATA 57.430 33.333 0.00 0.00 36.98 0.86
2021 2206 9.909644 AGGTAAACATCGTCTGTATATATGAAC 57.090 33.333 0.00 0.00 36.98 3.18
2022 2207 9.909644 GGTAAACATCGTCTGTATATATGAACT 57.090 33.333 0.00 0.00 36.98 3.01
2026 2211 9.684448 AACATCGTCTGTATATATGAACTTGAG 57.316 33.333 0.00 0.00 36.98 3.02
2027 2212 7.810282 ACATCGTCTGTATATATGAACTTGAGC 59.190 37.037 0.00 0.00 35.91 4.26
2028 2213 7.511959 TCGTCTGTATATATGAACTTGAGCT 57.488 36.000 0.00 0.00 0.00 4.09
2029 2214 8.617290 TCGTCTGTATATATGAACTTGAGCTA 57.383 34.615 0.00 0.00 0.00 3.32
2030 2215 9.063615 TCGTCTGTATATATGAACTTGAGCTAA 57.936 33.333 0.00 0.00 0.00 3.09
2031 2216 9.678941 CGTCTGTATATATGAACTTGAGCTAAA 57.321 33.333 0.00 0.00 0.00 1.85
2040 2225 7.840342 ATGAACTTGAGCTAAACACATCTAG 57.160 36.000 0.00 0.00 0.00 2.43
2041 2226 6.993079 TGAACTTGAGCTAAACACATCTAGA 58.007 36.000 0.00 0.00 0.00 2.43
2042 2227 7.441836 TGAACTTGAGCTAAACACATCTAGAA 58.558 34.615 0.00 0.00 0.00 2.10
2043 2228 7.385205 TGAACTTGAGCTAAACACATCTAGAAC 59.615 37.037 0.00 0.00 0.00 3.01
2044 2229 6.759272 ACTTGAGCTAAACACATCTAGAACA 58.241 36.000 0.00 0.00 0.00 3.18
2045 2230 6.870965 ACTTGAGCTAAACACATCTAGAACAG 59.129 38.462 0.00 0.00 0.00 3.16
2046 2231 6.590234 TGAGCTAAACACATCTAGAACAGA 57.410 37.500 0.00 0.00 37.79 3.41
2047 2232 6.390721 TGAGCTAAACACATCTAGAACAGAC 58.609 40.000 0.00 0.00 35.62 3.51
2048 2233 6.015434 TGAGCTAAACACATCTAGAACAGACA 60.015 38.462 0.00 0.00 35.62 3.41
2049 2234 6.159988 AGCTAAACACATCTAGAACAGACAC 58.840 40.000 0.00 0.00 35.62 3.67
2050 2235 6.015010 AGCTAAACACATCTAGAACAGACACT 60.015 38.462 0.00 0.00 35.62 3.55
2051 2236 7.176865 AGCTAAACACATCTAGAACAGACACTA 59.823 37.037 0.00 0.00 35.62 2.74
2052 2237 7.486551 GCTAAACACATCTAGAACAGACACTAG 59.513 40.741 0.00 0.00 35.62 2.57
2053 2238 7.526142 AAACACATCTAGAACAGACACTAGA 57.474 36.000 0.00 0.00 45.58 2.43
2061 2246 7.821652 TCTAGAACAGACACTAGATGAAGTTG 58.178 38.462 0.00 0.00 39.71 3.16
2062 2247 5.233988 AGAACAGACACTAGATGAAGTTGC 58.766 41.667 0.00 0.00 0.00 4.17
2063 2248 4.881019 ACAGACACTAGATGAAGTTGCT 57.119 40.909 0.00 0.00 0.00 3.91
2064 2249 5.220710 ACAGACACTAGATGAAGTTGCTT 57.779 39.130 0.00 0.00 0.00 3.91
2065 2250 6.346477 ACAGACACTAGATGAAGTTGCTTA 57.654 37.500 0.00 0.00 0.00 3.09
2066 2251 6.940739 ACAGACACTAGATGAAGTTGCTTAT 58.059 36.000 0.00 0.00 0.00 1.73
2067 2252 8.067751 ACAGACACTAGATGAAGTTGCTTATA 57.932 34.615 0.00 0.00 0.00 0.98
2068 2253 7.976734 ACAGACACTAGATGAAGTTGCTTATAC 59.023 37.037 0.00 0.00 0.00 1.47
2069 2254 7.166638 CAGACACTAGATGAAGTTGCTTATACG 59.833 40.741 0.00 0.00 0.00 3.06
2070 2255 6.864342 ACACTAGATGAAGTTGCTTATACGT 58.136 36.000 0.00 0.00 0.00 3.57
2071 2256 6.973474 ACACTAGATGAAGTTGCTTATACGTC 59.027 38.462 0.00 0.00 0.00 4.34
2072 2257 6.972901 CACTAGATGAAGTTGCTTATACGTCA 59.027 38.462 0.00 0.00 38.14 4.35
2073 2258 7.649705 CACTAGATGAAGTTGCTTATACGTCAT 59.350 37.037 0.00 0.00 43.92 3.06
2074 2259 8.847196 ACTAGATGAAGTTGCTTATACGTCATA 58.153 33.333 0.00 0.00 42.21 2.15
2075 2260 9.335891 CTAGATGAAGTTGCTTATACGTCATAG 57.664 37.037 0.00 0.00 42.21 2.23
2076 2261 7.941919 AGATGAAGTTGCTTATACGTCATAGA 58.058 34.615 0.00 0.00 42.21 1.98
2077 2262 8.414003 AGATGAAGTTGCTTATACGTCATAGAA 58.586 33.333 0.00 0.00 42.21 2.10
2078 2263 7.751047 TGAAGTTGCTTATACGTCATAGAAC 57.249 36.000 0.00 0.00 30.80 3.01
2079 2264 6.755141 TGAAGTTGCTTATACGTCATAGAACC 59.245 38.462 0.00 0.00 30.80 3.62
2080 2265 6.466885 AGTTGCTTATACGTCATAGAACCT 57.533 37.500 0.00 0.00 0.00 3.50
2081 2266 7.578310 AGTTGCTTATACGTCATAGAACCTA 57.422 36.000 0.00 0.00 0.00 3.08
2082 2267 8.004087 AGTTGCTTATACGTCATAGAACCTAA 57.996 34.615 0.00 0.00 0.00 2.69
2083 2268 7.919621 AGTTGCTTATACGTCATAGAACCTAAC 59.080 37.037 0.00 0.00 0.00 2.34
2084 2269 7.337480 TGCTTATACGTCATAGAACCTAACA 57.663 36.000 0.00 0.00 0.00 2.41
2085 2270 7.948357 TGCTTATACGTCATAGAACCTAACAT 58.052 34.615 0.00 0.00 0.00 2.71
2086 2271 9.070179 TGCTTATACGTCATAGAACCTAACATA 57.930 33.333 0.00 0.00 0.00 2.29
2087 2272 9.339492 GCTTATACGTCATAGAACCTAACATAC 57.661 37.037 0.00 0.00 0.00 2.39
2092 2277 7.883217 ACGTCATAGAACCTAACATACATAGG 58.117 38.462 0.00 0.00 44.59 2.57
2093 2278 7.039923 ACGTCATAGAACCTAACATACATAGGG 60.040 40.741 4.74 0.00 43.55 3.53
2094 2279 7.097834 GTCATAGAACCTAACATACATAGGGC 58.902 42.308 4.74 0.00 43.55 5.19
2095 2280 6.785466 TCATAGAACCTAACATACATAGGGCA 59.215 38.462 4.74 0.00 43.55 5.36
2096 2281 5.552870 AGAACCTAACATACATAGGGCAG 57.447 43.478 4.74 0.00 43.55 4.85
2097 2282 5.216622 AGAACCTAACATACATAGGGCAGA 58.783 41.667 4.74 0.00 43.55 4.26
2098 2283 5.665812 AGAACCTAACATACATAGGGCAGAA 59.334 40.000 4.74 0.00 43.55 3.02
2099 2284 5.968676 ACCTAACATACATAGGGCAGAAA 57.031 39.130 4.74 0.00 43.55 2.52
2100 2285 5.681639 ACCTAACATACATAGGGCAGAAAC 58.318 41.667 4.74 0.00 43.55 2.78
2101 2286 5.428783 ACCTAACATACATAGGGCAGAAACT 59.571 40.000 4.74 0.00 43.55 2.66
2102 2287 6.614087 ACCTAACATACATAGGGCAGAAACTA 59.386 38.462 4.74 0.00 43.55 2.24
2103 2288 7.155328 CCTAACATACATAGGGCAGAAACTAG 58.845 42.308 0.00 0.00 36.97 2.57
2104 2289 6.808321 AACATACATAGGGCAGAAACTAGA 57.192 37.500 0.00 0.00 0.00 2.43
2105 2290 6.412362 ACATACATAGGGCAGAAACTAGAG 57.588 41.667 0.00 0.00 0.00 2.43
2106 2291 3.828875 ACATAGGGCAGAAACTAGAGC 57.171 47.619 0.00 0.00 0.00 4.09
2107 2292 2.436173 ACATAGGGCAGAAACTAGAGCC 59.564 50.000 0.00 1.57 46.28 4.70
2111 2296 2.770164 GGCAGAAACTAGAGCCAAGA 57.230 50.000 0.00 0.00 46.26 3.02
2112 2297 3.059352 GGCAGAAACTAGAGCCAAGAA 57.941 47.619 0.00 0.00 46.26 2.52
2113 2298 2.744741 GGCAGAAACTAGAGCCAAGAAC 59.255 50.000 0.00 0.00 46.26 3.01
2114 2299 3.558109 GGCAGAAACTAGAGCCAAGAACT 60.558 47.826 0.00 0.00 46.26 3.01
2115 2300 4.322801 GGCAGAAACTAGAGCCAAGAACTA 60.323 45.833 0.00 0.00 46.26 2.24
2116 2301 5.423886 GCAGAAACTAGAGCCAAGAACTAT 58.576 41.667 0.00 0.00 0.00 2.12
2117 2302 6.407074 GGCAGAAACTAGAGCCAAGAACTATA 60.407 42.308 0.00 0.00 46.26 1.31
2118 2303 6.699642 GCAGAAACTAGAGCCAAGAACTATAG 59.300 42.308 0.00 0.00 35.54 1.31
2119 2304 6.699642 CAGAAACTAGAGCCAAGAACTATAGC 59.300 42.308 0.00 0.00 33.24 2.97
2120 2305 6.381420 AGAAACTAGAGCCAAGAACTATAGCA 59.619 38.462 0.00 0.00 33.24 3.49
2121 2306 5.782893 ACTAGAGCCAAGAACTATAGCAG 57.217 43.478 0.00 0.00 33.24 4.24
2122 2307 4.586841 ACTAGAGCCAAGAACTATAGCAGG 59.413 45.833 0.00 0.00 33.24 4.85
2123 2308 3.647636 AGAGCCAAGAACTATAGCAGGA 58.352 45.455 0.00 0.00 0.00 3.86
2124 2309 3.386402 AGAGCCAAGAACTATAGCAGGAC 59.614 47.826 0.00 0.00 0.00 3.85
2125 2310 3.379452 AGCCAAGAACTATAGCAGGACT 58.621 45.455 0.00 0.00 0.00 3.85
2126 2311 3.777522 AGCCAAGAACTATAGCAGGACTT 59.222 43.478 0.00 0.00 0.00 3.01
2127 2312 4.123506 GCCAAGAACTATAGCAGGACTTC 58.876 47.826 0.00 0.00 0.00 3.01
2128 2313 4.141824 GCCAAGAACTATAGCAGGACTTCT 60.142 45.833 0.00 0.00 0.00 2.85
2129 2314 5.069251 GCCAAGAACTATAGCAGGACTTCTA 59.931 44.000 0.00 0.00 0.00 2.10
2130 2315 6.407074 GCCAAGAACTATAGCAGGACTTCTAA 60.407 42.308 0.00 0.00 0.00 2.10
2131 2316 6.981559 CCAAGAACTATAGCAGGACTTCTAAC 59.018 42.308 0.00 0.00 0.00 2.34
2132 2317 7.363880 CCAAGAACTATAGCAGGACTTCTAACA 60.364 40.741 0.00 0.00 0.00 2.41
2133 2318 7.341445 AGAACTATAGCAGGACTTCTAACAG 57.659 40.000 0.00 0.00 0.00 3.16
2134 2319 7.120051 AGAACTATAGCAGGACTTCTAACAGA 58.880 38.462 0.00 0.00 0.00 3.41
2135 2320 7.616150 AGAACTATAGCAGGACTTCTAACAGAA 59.384 37.037 0.00 0.00 32.50 3.02
2136 2321 7.719871 ACTATAGCAGGACTTCTAACAGAAA 57.280 36.000 0.00 0.00 33.19 2.52
2137 2322 7.777095 ACTATAGCAGGACTTCTAACAGAAAG 58.223 38.462 0.00 0.00 33.19 2.62
2138 2323 4.278975 AGCAGGACTTCTAACAGAAAGG 57.721 45.455 0.00 0.00 33.19 3.11
2139 2324 3.904339 AGCAGGACTTCTAACAGAAAGGA 59.096 43.478 0.00 0.00 33.19 3.36
2140 2325 4.020662 AGCAGGACTTCTAACAGAAAGGAG 60.021 45.833 0.00 0.00 33.19 3.69
2141 2326 4.021016 GCAGGACTTCTAACAGAAAGGAGA 60.021 45.833 0.00 0.00 33.19 3.71
2142 2327 5.511545 GCAGGACTTCTAACAGAAAGGAGAA 60.512 44.000 0.00 0.00 33.19 2.87
2143 2328 6.162777 CAGGACTTCTAACAGAAAGGAGAAG 58.837 44.000 8.56 8.56 46.78 2.85
2144 2329 6.015010 CAGGACTTCTAACAGAAAGGAGAAGA 60.015 42.308 15.44 0.00 45.09 2.87
2145 2330 6.555360 AGGACTTCTAACAGAAAGGAGAAGAA 59.445 38.462 15.44 0.00 45.09 2.52
2146 2331 6.647481 GGACTTCTAACAGAAAGGAGAAGAAC 59.353 42.308 15.44 9.46 45.09 3.01
2147 2332 7.125792 ACTTCTAACAGAAAGGAGAAGAACA 57.874 36.000 15.44 0.00 45.09 3.18
2148 2333 6.987404 ACTTCTAACAGAAAGGAGAAGAACAC 59.013 38.462 15.44 0.00 45.09 3.32
2149 2334 5.529791 TCTAACAGAAAGGAGAAGAACACG 58.470 41.667 0.00 0.00 0.00 4.49
2150 2335 3.821421 ACAGAAAGGAGAAGAACACGT 57.179 42.857 0.00 0.00 0.00 4.49
2151 2336 4.931661 ACAGAAAGGAGAAGAACACGTA 57.068 40.909 0.00 0.00 0.00 3.57
2152 2337 4.618965 ACAGAAAGGAGAAGAACACGTAC 58.381 43.478 0.00 0.00 0.00 3.67
2153 2338 3.669122 CAGAAAGGAGAAGAACACGTACG 59.331 47.826 15.01 15.01 0.00 3.67
2154 2339 3.567164 AGAAAGGAGAAGAACACGTACGA 59.433 43.478 24.41 0.00 0.00 3.43
2155 2340 2.985406 AGGAGAAGAACACGTACGAC 57.015 50.000 24.41 10.02 0.00 4.34
2156 2341 2.224606 AGGAGAAGAACACGTACGACA 58.775 47.619 24.41 0.00 0.00 4.35
2157 2342 2.031333 AGGAGAAGAACACGTACGACAC 60.031 50.000 24.41 10.02 0.00 3.67
2158 2343 2.287188 GGAGAAGAACACGTACGACACA 60.287 50.000 24.41 0.00 0.00 3.72
2159 2344 2.971915 GAGAAGAACACGTACGACACAG 59.028 50.000 24.41 8.42 0.00 3.66
2160 2345 1.450905 GAAGAACACGTACGACACAGC 59.549 52.381 24.41 5.92 0.00 4.40
2161 2346 0.382873 AGAACACGTACGACACAGCA 59.617 50.000 24.41 0.00 0.00 4.41
2162 2347 1.202203 GAACACGTACGACACAGCAA 58.798 50.000 24.41 0.00 0.00 3.91
2163 2348 0.925466 AACACGTACGACACAGCAAC 59.075 50.000 24.41 0.00 0.00 4.17
2164 2349 0.179132 ACACGTACGACACAGCAACA 60.179 50.000 24.41 0.00 0.00 3.33
2165 2350 0.502695 CACGTACGACACAGCAACAG 59.497 55.000 24.41 0.00 0.00 3.16
2166 2351 1.213094 ACGTACGACACAGCAACAGC 61.213 55.000 24.41 0.00 0.00 4.40
2167 2352 1.212455 CGTACGACACAGCAACAGCA 61.212 55.000 10.44 0.00 0.00 4.41
2168 2353 0.508641 GTACGACACAGCAACAGCAG 59.491 55.000 0.00 0.00 0.00 4.24
2169 2354 0.387565 TACGACACAGCAACAGCAGA 59.612 50.000 0.00 0.00 0.00 4.26
2170 2355 0.461870 ACGACACAGCAACAGCAGAA 60.462 50.000 0.00 0.00 0.00 3.02
2171 2356 0.234106 CGACACAGCAACAGCAGAAG 59.766 55.000 0.00 0.00 0.00 2.85
2172 2357 0.040603 GACACAGCAACAGCAGAAGC 60.041 55.000 0.00 0.00 42.56 3.86
2182 2367 2.866028 GCAGAAGCGCTGGACTTG 59.134 61.111 12.58 6.60 45.03 3.16
2183 2368 2.684843 GCAGAAGCGCTGGACTTGG 61.685 63.158 12.58 1.74 45.03 3.61
2184 2369 2.037136 CAGAAGCGCTGGACTTGGG 61.037 63.158 12.58 0.00 41.07 4.12
2185 2370 2.747855 GAAGCGCTGGACTTGGGG 60.748 66.667 12.58 0.00 0.00 4.96
2186 2371 3.553095 GAAGCGCTGGACTTGGGGT 62.553 63.158 12.58 0.00 0.00 4.95
2187 2372 3.553095 AAGCGCTGGACTTGGGGTC 62.553 63.158 12.58 0.00 43.79 4.46
2189 2374 4.760047 CGCTGGACTTGGGGTCGG 62.760 72.222 0.00 0.00 45.35 4.79
2190 2375 3.637273 GCTGGACTTGGGGTCGGT 61.637 66.667 0.00 0.00 45.35 4.69
2191 2376 2.347490 CTGGACTTGGGGTCGGTG 59.653 66.667 0.00 0.00 45.35 4.94
2192 2377 2.446994 TGGACTTGGGGTCGGTGT 60.447 61.111 0.00 0.00 45.35 4.16
2193 2378 2.346365 GGACTTGGGGTCGGTGTC 59.654 66.667 0.00 0.00 45.35 3.67
2194 2379 2.346365 GACTTGGGGTCGGTGTCC 59.654 66.667 0.00 0.00 35.07 4.02
2195 2380 2.122547 ACTTGGGGTCGGTGTCCT 60.123 61.111 0.00 0.00 0.00 3.85
2196 2381 2.168666 GACTTGGGGTCGGTGTCCTC 62.169 65.000 0.00 0.00 35.07 3.71
2197 2382 3.296709 CTTGGGGTCGGTGTCCTCG 62.297 68.421 0.00 0.00 0.00 4.63
2201 2386 4.436998 GGTCGGTGTCCTCGCCTG 62.437 72.222 0.00 0.00 41.65 4.85
2205 2390 4.101448 GGTGTCCTCGCCTGCCAT 62.101 66.667 0.00 0.00 40.73 4.40
2206 2391 2.821366 GTGTCCTCGCCTGCCATG 60.821 66.667 0.00 0.00 0.00 3.66
2207 2392 3.321648 TGTCCTCGCCTGCCATGT 61.322 61.111 0.00 0.00 0.00 3.21
2208 2393 2.512515 GTCCTCGCCTGCCATGTC 60.513 66.667 0.00 0.00 0.00 3.06
2209 2394 4.147449 TCCTCGCCTGCCATGTCG 62.147 66.667 0.00 0.00 0.00 4.35
2210 2395 4.457496 CCTCGCCTGCCATGTCGT 62.457 66.667 0.00 0.00 0.00 4.34
2211 2396 2.887568 CTCGCCTGCCATGTCGTC 60.888 66.667 0.00 0.00 0.00 4.20
2212 2397 4.794439 TCGCCTGCCATGTCGTCG 62.794 66.667 0.00 0.00 0.00 5.12
2213 2398 4.794439 CGCCTGCCATGTCGTCGA 62.794 66.667 0.00 0.00 0.00 4.20
2214 2399 2.887568 GCCTGCCATGTCGTCGAG 60.888 66.667 0.00 0.00 0.00 4.04
2215 2400 2.202797 CCTGCCATGTCGTCGAGG 60.203 66.667 0.00 0.00 0.00 4.63
2216 2401 2.710902 CCTGCCATGTCGTCGAGGA 61.711 63.158 3.17 3.17 0.00 3.71
2217 2402 1.226802 CTGCCATGTCGTCGAGGAG 60.227 63.158 8.30 0.00 0.00 3.69
2218 2403 2.105128 GCCATGTCGTCGAGGAGG 59.895 66.667 8.30 7.75 0.00 4.30
2219 2404 2.711922 GCCATGTCGTCGAGGAGGT 61.712 63.158 8.30 0.00 0.00 3.85
2220 2405 1.433879 CCATGTCGTCGAGGAGGTC 59.566 63.158 8.30 0.00 0.00 3.85
2228 2413 3.054503 CGAGGAGGTCGTGGACGT 61.055 66.667 0.00 0.00 44.20 4.34
2229 2414 2.876219 GAGGAGGTCGTGGACGTC 59.124 66.667 7.13 7.13 43.84 4.34
2230 2415 3.036783 GAGGAGGTCGTGGACGTCG 62.037 68.421 9.92 0.00 44.99 5.12
2231 2416 4.112341 GGAGGTCGTGGACGTCGG 62.112 72.222 9.92 1.31 44.99 4.79
2232 2417 4.112341 GAGGTCGTGGACGTCGGG 62.112 72.222 9.92 0.92 37.62 5.14
2235 2420 3.673484 GTCGTGGACGTCGGGGAA 61.673 66.667 9.92 0.00 40.80 3.97
2236 2421 3.367743 TCGTGGACGTCGGGGAAG 61.368 66.667 9.92 0.00 40.80 3.46
2237 2422 3.367743 CGTGGACGTCGGGGAAGA 61.368 66.667 9.92 0.00 34.11 2.87
2238 2423 2.922950 CGTGGACGTCGGGGAAGAA 61.923 63.158 9.92 0.00 34.11 2.52
2239 2424 1.080025 GTGGACGTCGGGGAAGAAG 60.080 63.158 9.92 0.00 0.00 2.85
2240 2425 1.532316 TGGACGTCGGGGAAGAAGT 60.532 57.895 9.92 0.00 35.65 3.01
2241 2426 1.214853 GGACGTCGGGGAAGAAGTC 59.785 63.158 9.92 4.85 44.84 3.01
2242 2427 1.154073 GACGTCGGGGAAGAAGTCG 60.154 63.158 0.00 0.00 39.15 4.18
2243 2428 1.860484 GACGTCGGGGAAGAAGTCGT 61.860 60.000 0.00 0.00 39.15 4.34
2244 2429 1.154073 CGTCGGGGAAGAAGTCGTC 60.154 63.158 0.00 0.00 0.00 4.20
2245 2430 1.154073 GTCGGGGAAGAAGTCGTCG 60.154 63.158 0.00 0.00 0.00 5.12
2246 2431 1.601759 TCGGGGAAGAAGTCGTCGT 60.602 57.895 0.00 0.00 0.00 4.34
2247 2432 1.154073 CGGGGAAGAAGTCGTCGTC 60.154 63.158 0.00 0.00 34.29 4.20
2248 2433 1.154073 GGGGAAGAAGTCGTCGTCG 60.154 63.158 0.00 0.00 35.75 5.12
2249 2434 1.154073 GGGAAGAAGTCGTCGTCGG 60.154 63.158 1.55 0.00 35.75 4.79
2250 2435 1.154073 GGAAGAAGTCGTCGTCGGG 60.154 63.158 1.55 0.00 35.75 5.14
2251 2436 1.154073 GAAGAAGTCGTCGTCGGGG 60.154 63.158 1.55 0.00 37.69 5.73
2252 2437 1.580845 GAAGAAGTCGTCGTCGGGGA 61.581 60.000 1.55 0.00 37.69 4.81
2253 2438 1.174712 AAGAAGTCGTCGTCGGGGAA 61.175 55.000 1.55 0.00 37.69 3.97
2254 2439 1.154073 GAAGTCGTCGTCGGGGAAG 60.154 63.158 1.55 0.00 37.69 3.46
2255 2440 1.860484 GAAGTCGTCGTCGGGGAAGT 61.860 60.000 1.55 0.00 37.69 3.01
2256 2441 0.606401 AAGTCGTCGTCGGGGAAGTA 60.606 55.000 1.55 0.00 37.69 2.24
2257 2442 1.023513 AGTCGTCGTCGGGGAAGTAG 61.024 60.000 1.55 0.00 37.69 2.57
2258 2443 1.021390 GTCGTCGTCGGGGAAGTAGA 61.021 60.000 1.55 0.00 37.69 2.59
2259 2444 1.021390 TCGTCGTCGGGGAAGTAGAC 61.021 60.000 1.55 0.00 37.69 2.59
2260 2445 1.300971 CGTCGTCGGGGAAGTAGACA 61.301 60.000 0.00 0.00 34.80 3.41
2261 2446 1.101331 GTCGTCGGGGAAGTAGACAT 58.899 55.000 0.00 0.00 34.80 3.06
2262 2447 1.065251 GTCGTCGGGGAAGTAGACATC 59.935 57.143 0.00 0.00 34.80 3.06
2263 2448 0.029035 CGTCGGGGAAGTAGACATCG 59.971 60.000 0.00 0.00 34.80 3.84
2264 2449 0.384669 GTCGGGGAAGTAGACATCGG 59.615 60.000 0.00 0.00 35.19 4.18
2265 2450 1.067582 CGGGGAAGTAGACATCGGC 59.932 63.158 0.00 0.00 0.00 5.54
2266 2451 1.067582 GGGGAAGTAGACATCGGCG 59.932 63.158 0.00 0.00 0.00 6.46
2267 2452 1.389609 GGGGAAGTAGACATCGGCGA 61.390 60.000 13.87 13.87 0.00 5.54
2268 2453 0.248949 GGGAAGTAGACATCGGCGAC 60.249 60.000 13.76 0.00 0.00 5.19
2269 2454 0.248949 GGAAGTAGACATCGGCGACC 60.249 60.000 13.76 4.51 0.00 4.79
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
107 108 4.947147 GACCCACCGCCTTGCACA 62.947 66.667 0.00 0.00 0.00 4.57
119 120 1.740664 CGAGAGAGACGACGACCCA 60.741 63.158 0.00 0.00 0.00 4.51
128 132 0.176219 TCGACTCCTCCGAGAGAGAC 59.824 60.000 16.41 11.25 46.50 3.36
161 165 2.045131 GGAGCCAGGTCGTCGTACT 61.045 63.158 0.00 0.00 0.00 2.73
186 190 1.004628 ACCAGTGCATATGCCAGTGAA 59.995 47.619 24.54 1.87 41.18 3.18
197 201 1.280421 GAGGAGGAAGAACCAGTGCAT 59.720 52.381 0.00 0.00 42.04 3.96
203 207 2.188817 GCTAAGGAGGAGGAAGAACCA 58.811 52.381 0.00 0.00 42.04 3.67
223 227 3.849951 CGGTCATCGGTGGGGAGG 61.850 72.222 0.00 0.00 34.75 4.30
287 291 4.880164 ACAAGAACTACTGGGCTCCTATA 58.120 43.478 0.00 0.00 0.00 1.31
288 292 3.725634 ACAAGAACTACTGGGCTCCTAT 58.274 45.455 0.00 0.00 0.00 2.57
368 372 0.246360 TGGCAGTCGACATCATTCGT 59.754 50.000 19.50 0.00 40.07 3.85
408 412 5.411977 CACAAGAGTTGAAGATGCAGATTCT 59.588 40.000 13.16 0.00 0.00 2.40
414 418 2.551032 CTGCACAAGAGTTGAAGATGCA 59.449 45.455 0.00 0.00 36.83 3.96
599 674 1.132624 ACCACCACTACTTACCCACCT 60.133 52.381 0.00 0.00 0.00 4.00
623 700 3.994204 TCGCGCCTATATTTACTCACA 57.006 42.857 0.00 0.00 0.00 3.58
686 766 5.296283 CAGAGTTCATGGCTTATTGAAGAGG 59.704 44.000 0.00 0.00 34.25 3.69
724 804 3.627123 TCGATCTGCACACAATTTATGGG 59.373 43.478 0.00 0.00 38.89 4.00
729 809 3.005554 CTCCTCGATCTGCACACAATTT 58.994 45.455 0.00 0.00 0.00 1.82
796 876 0.250513 GGATGAACCGACTCCTTGCT 59.749 55.000 0.00 0.00 0.00 3.91
836 916 0.034186 TTCTTCCTCGGCGGTAGGTA 60.034 55.000 13.57 4.40 35.48 3.08
840 920 2.703798 CGGTTCTTCCTCGGCGGTA 61.704 63.158 7.21 0.00 0.00 4.02
874 954 2.504899 CATGCACTCGTCGTCGCT 60.505 61.111 0.00 0.00 36.96 4.93
927 1007 1.622449 CCACCCTCCTCATGGTAGTGA 60.622 57.143 0.00 0.00 33.67 3.41
967 1047 0.036732 AGCTTCGGTGCAAGGATGAA 59.963 50.000 0.00 0.00 34.99 2.57
1008 1089 1.139058 ACGAAGTGCTTGGTGAAGTCT 59.861 47.619 0.00 0.00 42.51 3.24
1039 1120 0.320771 TTCCTCAGCTTGAACTCCGC 60.321 55.000 0.00 0.00 0.00 5.54
1077 1158 0.320374 TTAGCTTCACCGTCACCCTG 59.680 55.000 0.00 0.00 0.00 4.45
1160 1241 1.079405 AACGTCACCATGTAGCCGG 60.079 57.895 0.00 0.00 0.00 6.13
1292 1373 0.544595 ACTTAGGAAGGAGGTGCCGT 60.545 55.000 0.00 0.00 43.43 5.68
1293 1374 1.136500 GTACTTAGGAAGGAGGTGCCG 59.864 57.143 0.00 0.00 43.43 5.69
1377 1501 9.040939 CAACATGGTTCAGATAACATAACGATA 57.959 33.333 0.00 0.00 0.00 2.92
1378 1502 7.552687 ACAACATGGTTCAGATAACATAACGAT 59.447 33.333 0.00 0.00 0.00 3.73
1379 1503 6.876789 ACAACATGGTTCAGATAACATAACGA 59.123 34.615 0.00 0.00 0.00 3.85
1380 1504 7.072177 ACAACATGGTTCAGATAACATAACG 57.928 36.000 0.00 0.00 0.00 3.18
1408 1544 7.148606 GCAGAGCATAAATAGAGCATCAACTAG 60.149 40.741 0.00 0.00 37.82 2.57
1438 1574 5.435686 ACCATGTACCACACATCATAAGT 57.564 39.130 0.00 0.00 44.99 2.24
1463 1600 0.954452 GTTAGCAGCACACTTTGGCT 59.046 50.000 0.00 0.00 42.06 4.75
1467 1604 2.222027 GTGAGGTTAGCAGCACACTTT 58.778 47.619 0.00 0.00 38.52 2.66
1478 1615 3.695830 TTGGCTAGTTGGTGAGGTTAG 57.304 47.619 0.00 0.00 0.00 2.34
1568 1751 1.518056 CTGCATGGTGTTCGGTTGCT 61.518 55.000 0.00 0.00 34.47 3.91
1583 1767 2.203337 GGGCTGAACCACACTGCA 60.203 61.111 0.00 0.00 42.05 4.41
1601 1785 2.362120 ATGCCCTCTTGCCTGCAC 60.362 61.111 0.00 0.00 36.41 4.57
1674 1858 3.198635 TGCATAGCCTTCTTAACTCAGCT 59.801 43.478 0.00 0.00 0.00 4.24
1683 1867 1.407979 GCTGCATTGCATAGCCTTCTT 59.592 47.619 12.53 0.00 38.13 2.52
1706 1890 4.805192 GTGTTTGGTTGTCGTAGTCTACAA 59.195 41.667 10.59 0.00 33.35 2.41
1738 1923 1.302511 CCACCGGCAGCTAGTGTTT 60.303 57.895 0.00 0.00 0.00 2.83
1739 1924 2.347490 CCACCGGCAGCTAGTGTT 59.653 61.111 0.00 0.00 0.00 3.32
1740 1925 3.706373 CCCACCGGCAGCTAGTGT 61.706 66.667 0.00 0.00 0.00 3.55
1752 1937 1.830847 AAAGTTTGGTCGGCCCACC 60.831 57.895 13.46 13.46 45.19 4.61
1753 1938 1.362355 CAAAGTTTGGTCGGCCCAC 59.638 57.895 2.12 0.00 45.19 4.61
1754 1939 1.830408 CCAAAGTTTGGTCGGCCCA 60.830 57.895 24.17 0.00 45.93 5.36
1755 1940 3.047735 CCAAAGTTTGGTCGGCCC 58.952 61.111 24.17 0.00 45.93 5.80
1763 1948 3.548488 TGGCTGGCCCAAAGTTTG 58.452 55.556 8.73 8.73 41.82 2.93
1774 1959 2.898920 AATGAGCGGGATGTGGCTGG 62.899 60.000 0.00 0.00 40.16 4.85
1775 1960 1.442526 GAATGAGCGGGATGTGGCTG 61.443 60.000 0.00 0.00 40.16 4.85
1776 1961 1.153086 GAATGAGCGGGATGTGGCT 60.153 57.895 0.00 0.00 43.42 4.75
1777 1962 2.537560 CGAATGAGCGGGATGTGGC 61.538 63.158 0.00 0.00 0.00 5.01
1778 1963 0.744414 AACGAATGAGCGGGATGTGG 60.744 55.000 0.00 0.00 35.12 4.17
1779 1964 1.086696 AAACGAATGAGCGGGATGTG 58.913 50.000 0.00 0.00 35.12 3.21
1780 1965 1.086696 CAAACGAATGAGCGGGATGT 58.913 50.000 0.00 0.00 35.12 3.06
1781 1966 1.086696 ACAAACGAATGAGCGGGATG 58.913 50.000 0.00 0.00 35.12 3.51
1782 1967 2.684001 TACAAACGAATGAGCGGGAT 57.316 45.000 0.00 0.00 35.12 3.85
1783 1968 2.459060 TTACAAACGAATGAGCGGGA 57.541 45.000 0.00 0.00 35.12 5.14
1784 1969 2.791158 GCATTACAAACGAATGAGCGGG 60.791 50.000 0.00 0.00 36.57 6.13
1785 1970 2.159585 TGCATTACAAACGAATGAGCGG 60.160 45.455 0.00 0.00 36.57 5.52
1786 1971 3.093574 CTGCATTACAAACGAATGAGCG 58.906 45.455 0.00 0.00 36.57 5.03
1787 1972 2.848302 GCTGCATTACAAACGAATGAGC 59.152 45.455 0.00 0.00 36.57 4.26
1788 1973 4.082274 TGCTGCATTACAAACGAATGAG 57.918 40.909 0.00 0.00 36.57 2.90
1789 1974 4.495911 TTGCTGCATTACAAACGAATGA 57.504 36.364 1.84 0.00 36.57 2.57
1790 1975 5.118971 ACAATTGCTGCATTACAAACGAATG 59.881 36.000 1.84 0.00 37.35 2.67
1791 1976 5.229423 ACAATTGCTGCATTACAAACGAAT 58.771 33.333 1.84 0.00 0.00 3.34
1792 1977 4.615949 ACAATTGCTGCATTACAAACGAA 58.384 34.783 1.84 0.00 0.00 3.85
1793 1978 4.235939 ACAATTGCTGCATTACAAACGA 57.764 36.364 1.84 0.00 0.00 3.85
1794 1979 4.970472 AACAATTGCTGCATTACAAACG 57.030 36.364 1.84 0.00 0.00 3.60
1795 1980 7.816945 ATCTAACAATTGCTGCATTACAAAC 57.183 32.000 1.84 0.00 0.00 2.93
1796 1981 8.710551 CAAATCTAACAATTGCTGCATTACAAA 58.289 29.630 1.84 0.00 0.00 2.83
1797 1982 7.331440 CCAAATCTAACAATTGCTGCATTACAA 59.669 33.333 1.84 0.00 0.00 2.41
1798 1983 6.812656 CCAAATCTAACAATTGCTGCATTACA 59.187 34.615 1.84 0.00 0.00 2.41
1799 1984 6.813152 ACCAAATCTAACAATTGCTGCATTAC 59.187 34.615 1.84 0.00 0.00 1.89
1800 1985 6.934056 ACCAAATCTAACAATTGCTGCATTA 58.066 32.000 1.84 0.00 0.00 1.90
1801 1986 5.797051 ACCAAATCTAACAATTGCTGCATT 58.203 33.333 1.84 0.00 0.00 3.56
1802 1987 5.410355 ACCAAATCTAACAATTGCTGCAT 57.590 34.783 1.84 0.00 0.00 3.96
1803 1988 4.870123 ACCAAATCTAACAATTGCTGCA 57.130 36.364 5.05 0.00 0.00 4.41
1804 1989 5.979517 GGATACCAAATCTAACAATTGCTGC 59.020 40.000 5.05 0.00 0.00 5.25
1805 1990 7.099266 TGGATACCAAATCTAACAATTGCTG 57.901 36.000 5.05 0.00 0.00 4.41
1806 1991 7.560991 TGATGGATACCAAATCTAACAATTGCT 59.439 33.333 5.05 0.00 36.95 3.91
1807 1992 7.715657 TGATGGATACCAAATCTAACAATTGC 58.284 34.615 5.05 0.00 36.95 3.56
1808 1993 9.903682 GATGATGGATACCAAATCTAACAATTG 57.096 33.333 3.24 3.24 36.95 2.32
1809 1994 9.082313 GGATGATGGATACCAAATCTAACAATT 57.918 33.333 12.93 0.00 36.95 2.32
1810 1995 8.451245 AGGATGATGGATACCAAATCTAACAAT 58.549 33.333 12.93 0.00 36.95 2.71
1811 1996 7.815383 AGGATGATGGATACCAAATCTAACAA 58.185 34.615 12.93 0.00 36.95 2.83
1812 1997 7.072328 TGAGGATGATGGATACCAAATCTAACA 59.928 37.037 12.93 9.55 36.95 2.41
1813 1998 7.453393 TGAGGATGATGGATACCAAATCTAAC 58.547 38.462 12.93 8.02 36.95 2.34
1814 1999 7.631510 TGAGGATGATGGATACCAAATCTAA 57.368 36.000 12.93 2.37 36.95 2.10
1815 2000 7.092712 GGATGAGGATGATGGATACCAAATCTA 60.093 40.741 12.93 0.00 36.95 1.98
1816 2001 6.296894 GGATGAGGATGATGGATACCAAATCT 60.297 42.308 12.93 1.71 36.95 2.40
1817 2002 5.884792 GGATGAGGATGATGGATACCAAATC 59.115 44.000 0.00 0.00 36.95 2.17
1818 2003 5.314039 TGGATGAGGATGATGGATACCAAAT 59.686 40.000 0.00 0.00 36.95 2.32
1819 2004 4.664536 TGGATGAGGATGATGGATACCAAA 59.335 41.667 0.00 0.00 36.95 3.28
1820 2005 4.042062 GTGGATGAGGATGATGGATACCAA 59.958 45.833 0.00 0.00 36.95 3.67
1821 2006 3.584406 GTGGATGAGGATGATGGATACCA 59.416 47.826 0.00 0.00 38.19 3.25
1822 2007 3.584406 TGTGGATGAGGATGATGGATACC 59.416 47.826 0.00 0.00 0.00 2.73
1823 2008 4.897509 TGTGGATGAGGATGATGGATAC 57.102 45.455 0.00 0.00 0.00 2.24
1824 2009 5.347978 AGATGTGGATGAGGATGATGGATA 58.652 41.667 0.00 0.00 0.00 2.59
1825 2010 4.176753 AGATGTGGATGAGGATGATGGAT 58.823 43.478 0.00 0.00 0.00 3.41
1826 2011 3.581770 GAGATGTGGATGAGGATGATGGA 59.418 47.826 0.00 0.00 0.00 3.41
1827 2012 3.616802 CGAGATGTGGATGAGGATGATGG 60.617 52.174 0.00 0.00 0.00 3.51
1828 2013 3.006644 ACGAGATGTGGATGAGGATGATG 59.993 47.826 0.00 0.00 0.00 3.07
1829 2014 3.237746 ACGAGATGTGGATGAGGATGAT 58.762 45.455 0.00 0.00 0.00 2.45
1830 2015 2.670939 ACGAGATGTGGATGAGGATGA 58.329 47.619 0.00 0.00 0.00 2.92
1831 2016 3.465742 AACGAGATGTGGATGAGGATG 57.534 47.619 0.00 0.00 0.00 3.51
1832 2017 4.494091 AAAACGAGATGTGGATGAGGAT 57.506 40.909 0.00 0.00 0.00 3.24
1833 2018 3.981071 AAAACGAGATGTGGATGAGGA 57.019 42.857 0.00 0.00 0.00 3.71
1852 2037 4.651778 ACGGATGTCTTCATGGAGAAAAA 58.348 39.130 4.91 0.00 35.40 1.94
1853 2038 4.253685 GACGGATGTCTTCATGGAGAAAA 58.746 43.478 4.91 0.00 42.08 2.29
1854 2039 3.260632 TGACGGATGTCTTCATGGAGAAA 59.739 43.478 4.91 0.00 45.70 2.52
1855 2040 2.831526 TGACGGATGTCTTCATGGAGAA 59.168 45.455 4.91 0.00 45.70 2.87
1856 2041 2.428530 CTGACGGATGTCTTCATGGAGA 59.571 50.000 0.00 0.00 45.70 3.71
1857 2042 2.428530 TCTGACGGATGTCTTCATGGAG 59.571 50.000 0.00 0.00 45.70 3.86
1858 2043 2.456577 TCTGACGGATGTCTTCATGGA 58.543 47.619 0.00 0.00 45.70 3.41
1859 2044 2.967599 TCTGACGGATGTCTTCATGG 57.032 50.000 0.00 0.00 45.70 3.66
1860 2045 4.319139 AGATCTGACGGATGTCTTCATG 57.681 45.455 0.18 0.00 45.70 3.07
1861 2046 5.136828 AGTAGATCTGACGGATGTCTTCAT 58.863 41.667 5.18 0.00 45.70 2.57
1862 2047 4.527944 AGTAGATCTGACGGATGTCTTCA 58.472 43.478 5.18 0.00 45.70 3.02
1863 2048 5.508200 AAGTAGATCTGACGGATGTCTTC 57.492 43.478 5.18 0.00 45.70 2.87
1864 2049 5.654650 AGAAAGTAGATCTGACGGATGTCTT 59.345 40.000 5.18 1.60 45.70 3.01
1865 2050 5.067153 CAGAAAGTAGATCTGACGGATGTCT 59.933 44.000 5.18 0.00 45.74 3.41
1866 2051 5.163602 ACAGAAAGTAGATCTGACGGATGTC 60.164 44.000 5.18 0.00 45.74 3.06
1867 2052 4.707448 ACAGAAAGTAGATCTGACGGATGT 59.293 41.667 5.18 0.00 45.74 3.06
1868 2053 5.255710 ACAGAAAGTAGATCTGACGGATG 57.744 43.478 5.18 0.53 45.74 3.51
1869 2054 5.394663 CCAACAGAAAGTAGATCTGACGGAT 60.395 44.000 5.18 0.00 45.74 4.18
1870 2055 4.082190 CCAACAGAAAGTAGATCTGACGGA 60.082 45.833 5.18 0.00 45.74 4.69
1871 2056 4.082190 TCCAACAGAAAGTAGATCTGACGG 60.082 45.833 5.18 9.31 45.74 4.79
1872 2057 5.060662 TCCAACAGAAAGTAGATCTGACG 57.939 43.478 5.18 1.36 45.74 4.35
1885 2070 8.250332 GGTAAATTGCTCATATTTCCAACAGAA 58.750 33.333 0.00 0.00 0.00 3.02
1886 2071 7.395772 TGGTAAATTGCTCATATTTCCAACAGA 59.604 33.333 0.00 0.00 0.00 3.41
1887 2072 7.546358 TGGTAAATTGCTCATATTTCCAACAG 58.454 34.615 0.00 0.00 0.00 3.16
1888 2073 7.473735 TGGTAAATTGCTCATATTTCCAACA 57.526 32.000 0.00 0.00 0.00 3.33
1889 2074 8.770438 TTTGGTAAATTGCTCATATTTCCAAC 57.230 30.769 0.00 0.00 35.01 3.77
1924 2109 9.472361 GTCATGCTTTATCTAGTATTTCCGTTA 57.528 33.333 0.00 0.00 0.00 3.18
1925 2110 8.204836 AGTCATGCTTTATCTAGTATTTCCGTT 58.795 33.333 0.00 0.00 0.00 4.44
1926 2111 7.727181 AGTCATGCTTTATCTAGTATTTCCGT 58.273 34.615 0.00 0.00 0.00 4.69
1927 2112 9.692749 TTAGTCATGCTTTATCTAGTATTTCCG 57.307 33.333 0.00 0.00 0.00 4.30
1970 2155 4.251268 TCTCTGTCAGATTGCATGACTTG 58.749 43.478 17.40 11.39 45.87 3.16
1971 2156 4.222366 TCTCTCTGTCAGATTGCATGACTT 59.778 41.667 17.40 0.00 45.87 3.01
1972 2157 3.768215 TCTCTCTGTCAGATTGCATGACT 59.232 43.478 17.40 1.86 45.87 3.41
1973 2158 4.120792 TCTCTCTGTCAGATTGCATGAC 57.879 45.455 11.24 11.24 45.88 3.06
1974 2159 4.382793 CCTTCTCTCTGTCAGATTGCATGA 60.383 45.833 2.22 0.00 0.00 3.07
1975 2160 3.872182 CCTTCTCTCTGTCAGATTGCATG 59.128 47.826 2.22 0.00 0.00 4.06
1976 2161 3.518705 ACCTTCTCTCTGTCAGATTGCAT 59.481 43.478 2.22 0.00 0.00 3.96
1977 2162 2.902486 ACCTTCTCTCTGTCAGATTGCA 59.098 45.455 2.22 0.00 0.00 4.08
1978 2163 3.608316 ACCTTCTCTCTGTCAGATTGC 57.392 47.619 2.22 0.00 0.00 3.56
1979 2164 6.459066 TGTTTACCTTCTCTCTGTCAGATTG 58.541 40.000 2.22 0.00 0.00 2.67
1980 2165 6.672266 TGTTTACCTTCTCTCTGTCAGATT 57.328 37.500 2.22 0.00 0.00 2.40
1981 2166 6.405286 CGATGTTTACCTTCTCTCTGTCAGAT 60.405 42.308 2.22 0.00 0.00 2.90
1982 2167 5.106118 CGATGTTTACCTTCTCTCTGTCAGA 60.106 44.000 1.78 1.78 0.00 3.27
1983 2168 5.098893 CGATGTTTACCTTCTCTCTGTCAG 58.901 45.833 0.00 0.00 0.00 3.51
1984 2169 4.523173 ACGATGTTTACCTTCTCTCTGTCA 59.477 41.667 0.00 0.00 0.00 3.58
1985 2170 5.061920 ACGATGTTTACCTTCTCTCTGTC 57.938 43.478 0.00 0.00 0.00 3.51
1986 2171 4.767928 AGACGATGTTTACCTTCTCTCTGT 59.232 41.667 0.00 0.00 0.00 3.41
1987 2172 5.098893 CAGACGATGTTTACCTTCTCTCTG 58.901 45.833 0.00 0.00 0.00 3.35
1988 2173 4.767928 ACAGACGATGTTTACCTTCTCTCT 59.232 41.667 0.00 0.00 39.96 3.10
1989 2174 5.061920 ACAGACGATGTTTACCTTCTCTC 57.938 43.478 0.00 0.00 39.96 3.20
1990 2175 6.777213 ATACAGACGATGTTTACCTTCTCT 57.223 37.500 3.51 0.00 39.96 3.10
1995 2180 9.909644 GTTCATATATACAGACGATGTTTACCT 57.090 33.333 3.51 0.00 39.96 3.08
1996 2181 9.909644 AGTTCATATATACAGACGATGTTTACC 57.090 33.333 3.51 0.00 39.96 2.85
2000 2185 9.684448 CTCAAGTTCATATATACAGACGATGTT 57.316 33.333 3.51 0.00 39.96 2.71
2001 2186 7.810282 GCTCAAGTTCATATATACAGACGATGT 59.190 37.037 0.00 0.00 46.45 3.06
2002 2187 8.026026 AGCTCAAGTTCATATATACAGACGATG 58.974 37.037 0.00 0.00 0.00 3.84
2003 2188 8.116651 AGCTCAAGTTCATATATACAGACGAT 57.883 34.615 0.00 0.00 0.00 3.73
2004 2189 7.511959 AGCTCAAGTTCATATATACAGACGA 57.488 36.000 0.00 0.00 0.00 4.20
2005 2190 9.678941 TTTAGCTCAAGTTCATATATACAGACG 57.321 33.333 0.00 0.00 0.00 4.18
2014 2199 9.539825 CTAGATGTGTTTAGCTCAAGTTCATAT 57.460 33.333 0.00 0.00 0.00 1.78
2015 2200 8.749354 TCTAGATGTGTTTAGCTCAAGTTCATA 58.251 33.333 0.00 0.00 0.00 2.15
2016 2201 7.615403 TCTAGATGTGTTTAGCTCAAGTTCAT 58.385 34.615 0.00 0.00 0.00 2.57
2017 2202 6.993079 TCTAGATGTGTTTAGCTCAAGTTCA 58.007 36.000 0.00 0.00 0.00 3.18
2018 2203 7.385205 TGTTCTAGATGTGTTTAGCTCAAGTTC 59.615 37.037 0.00 0.00 0.00 3.01
2019 2204 7.217200 TGTTCTAGATGTGTTTAGCTCAAGTT 58.783 34.615 0.00 0.00 0.00 2.66
2020 2205 6.759272 TGTTCTAGATGTGTTTAGCTCAAGT 58.241 36.000 0.00 0.00 0.00 3.16
2021 2206 7.062839 GTCTGTTCTAGATGTGTTTAGCTCAAG 59.937 40.741 0.00 0.00 37.83 3.02
2022 2207 6.868864 GTCTGTTCTAGATGTGTTTAGCTCAA 59.131 38.462 0.00 0.00 37.83 3.02
2023 2208 6.015434 TGTCTGTTCTAGATGTGTTTAGCTCA 60.015 38.462 0.00 0.00 37.83 4.26
2024 2209 6.309251 GTGTCTGTTCTAGATGTGTTTAGCTC 59.691 42.308 0.00 0.00 37.83 4.09
2025 2210 6.015010 AGTGTCTGTTCTAGATGTGTTTAGCT 60.015 38.462 0.00 0.00 37.83 3.32
2026 2211 6.159988 AGTGTCTGTTCTAGATGTGTTTAGC 58.840 40.000 0.00 0.00 37.83 3.09
2027 2212 8.731605 TCTAGTGTCTGTTCTAGATGTGTTTAG 58.268 37.037 0.00 0.00 38.05 1.85
2028 2213 8.631480 TCTAGTGTCTGTTCTAGATGTGTTTA 57.369 34.615 0.00 0.00 38.05 2.01
2029 2214 7.526142 TCTAGTGTCTGTTCTAGATGTGTTT 57.474 36.000 0.00 0.00 38.05 2.83
2030 2215 7.710676 ATCTAGTGTCTGTTCTAGATGTGTT 57.289 36.000 12.08 0.00 46.03 3.32
2036 2221 7.575909 GCAACTTCATCTAGTGTCTGTTCTAGA 60.576 40.741 4.72 4.72 44.07 2.43
2037 2222 6.529829 GCAACTTCATCTAGTGTCTGTTCTAG 59.470 42.308 0.00 0.00 36.10 2.43
2038 2223 6.209589 AGCAACTTCATCTAGTGTCTGTTCTA 59.790 38.462 0.00 0.00 0.00 2.10
2039 2224 5.011533 AGCAACTTCATCTAGTGTCTGTTCT 59.988 40.000 0.00 0.00 0.00 3.01
2040 2225 5.233988 AGCAACTTCATCTAGTGTCTGTTC 58.766 41.667 0.00 0.00 0.00 3.18
2041 2226 5.220710 AGCAACTTCATCTAGTGTCTGTT 57.779 39.130 0.00 0.00 0.00 3.16
2042 2227 4.881019 AGCAACTTCATCTAGTGTCTGT 57.119 40.909 0.00 0.00 0.00 3.41
2043 2228 7.166638 CGTATAAGCAACTTCATCTAGTGTCTG 59.833 40.741 0.00 0.00 0.00 3.51
2044 2229 7.148052 ACGTATAAGCAACTTCATCTAGTGTCT 60.148 37.037 0.00 0.00 0.00 3.41
2045 2230 6.973474 ACGTATAAGCAACTTCATCTAGTGTC 59.027 38.462 0.00 0.00 0.00 3.67
2046 2231 6.864342 ACGTATAAGCAACTTCATCTAGTGT 58.136 36.000 0.00 0.00 0.00 3.55
2047 2232 6.972901 TGACGTATAAGCAACTTCATCTAGTG 59.027 38.462 0.00 0.00 0.00 2.74
2048 2233 7.096884 TGACGTATAAGCAACTTCATCTAGT 57.903 36.000 0.00 0.00 0.00 2.57
2049 2234 9.335891 CTATGACGTATAAGCAACTTCATCTAG 57.664 37.037 0.00 0.00 37.16 2.43
2050 2235 9.063615 TCTATGACGTATAAGCAACTTCATCTA 57.936 33.333 0.00 0.00 37.16 1.98
2051 2236 7.941919 TCTATGACGTATAAGCAACTTCATCT 58.058 34.615 0.00 0.00 37.16 2.90
2052 2237 8.480853 GTTCTATGACGTATAAGCAACTTCATC 58.519 37.037 0.00 0.00 37.16 2.92
2053 2238 7.438459 GGTTCTATGACGTATAAGCAACTTCAT 59.562 37.037 0.00 0.00 38.76 2.57
2054 2239 6.755141 GGTTCTATGACGTATAAGCAACTTCA 59.245 38.462 0.00 0.00 30.81 3.02
2055 2240 6.979238 AGGTTCTATGACGTATAAGCAACTTC 59.021 38.462 0.00 0.00 0.00 3.01
2056 2241 6.875076 AGGTTCTATGACGTATAAGCAACTT 58.125 36.000 0.00 0.00 0.00 2.66
2057 2242 6.466885 AGGTTCTATGACGTATAAGCAACT 57.533 37.500 0.00 0.00 0.00 3.16
2058 2243 7.703621 TGTTAGGTTCTATGACGTATAAGCAAC 59.296 37.037 0.00 7.21 0.00 4.17
2059 2244 7.774134 TGTTAGGTTCTATGACGTATAAGCAA 58.226 34.615 0.00 0.00 0.00 3.91
2060 2245 7.337480 TGTTAGGTTCTATGACGTATAAGCA 57.663 36.000 0.00 0.00 0.00 3.91
2061 2246 9.339492 GTATGTTAGGTTCTATGACGTATAAGC 57.661 37.037 0.00 0.00 0.00 3.09
2066 2251 9.006839 CCTATGTATGTTAGGTTCTATGACGTA 57.993 37.037 0.00 0.00 33.00 3.57
2067 2252 7.039923 CCCTATGTATGTTAGGTTCTATGACGT 60.040 40.741 0.00 0.00 35.42 4.34
2068 2253 7.313646 CCCTATGTATGTTAGGTTCTATGACG 58.686 42.308 0.00 0.00 35.42 4.35
2069 2254 7.097834 GCCCTATGTATGTTAGGTTCTATGAC 58.902 42.308 0.00 0.00 35.42 3.06
2070 2255 6.785466 TGCCCTATGTATGTTAGGTTCTATGA 59.215 38.462 0.00 0.00 35.42 2.15
2071 2256 7.004555 TGCCCTATGTATGTTAGGTTCTATG 57.995 40.000 0.00 0.00 35.42 2.23
2072 2257 7.016914 TCTGCCCTATGTATGTTAGGTTCTAT 58.983 38.462 0.00 0.00 35.42 1.98
2073 2258 6.378745 TCTGCCCTATGTATGTTAGGTTCTA 58.621 40.000 0.00 0.00 35.42 2.10
2074 2259 5.216622 TCTGCCCTATGTATGTTAGGTTCT 58.783 41.667 0.00 0.00 35.42 3.01
2075 2260 5.546621 TCTGCCCTATGTATGTTAGGTTC 57.453 43.478 0.00 0.00 35.42 3.62
2076 2261 5.968676 TTCTGCCCTATGTATGTTAGGTT 57.031 39.130 0.00 0.00 35.42 3.50
2077 2262 5.428783 AGTTTCTGCCCTATGTATGTTAGGT 59.571 40.000 0.00 0.00 35.42 3.08
2078 2263 5.930135 AGTTTCTGCCCTATGTATGTTAGG 58.070 41.667 0.00 0.00 36.71 2.69
2079 2264 7.952671 TCTAGTTTCTGCCCTATGTATGTTAG 58.047 38.462 0.00 0.00 0.00 2.34
2080 2265 7.471539 GCTCTAGTTTCTGCCCTATGTATGTTA 60.472 40.741 0.00 0.00 0.00 2.41
2081 2266 6.686632 GCTCTAGTTTCTGCCCTATGTATGTT 60.687 42.308 0.00 0.00 0.00 2.71
2082 2267 5.221541 GCTCTAGTTTCTGCCCTATGTATGT 60.222 44.000 0.00 0.00 0.00 2.29
2083 2268 5.233988 GCTCTAGTTTCTGCCCTATGTATG 58.766 45.833 0.00 0.00 0.00 2.39
2084 2269 4.284746 GGCTCTAGTTTCTGCCCTATGTAT 59.715 45.833 0.00 0.00 39.49 2.29
2085 2270 3.641906 GGCTCTAGTTTCTGCCCTATGTA 59.358 47.826 0.00 0.00 39.49 2.29
2086 2271 2.436173 GGCTCTAGTTTCTGCCCTATGT 59.564 50.000 0.00 0.00 39.49 2.29
2087 2272 2.435805 TGGCTCTAGTTTCTGCCCTATG 59.564 50.000 0.00 0.00 44.32 2.23
2088 2273 2.764269 TGGCTCTAGTTTCTGCCCTAT 58.236 47.619 0.00 0.00 44.32 2.57
2089 2274 2.247699 TGGCTCTAGTTTCTGCCCTA 57.752 50.000 0.00 0.00 44.32 3.53
2090 2275 1.280421 CTTGGCTCTAGTTTCTGCCCT 59.720 52.381 0.00 0.00 44.32 5.19
2091 2276 1.279271 TCTTGGCTCTAGTTTCTGCCC 59.721 52.381 0.00 0.00 44.32 5.36
2092 2277 2.744741 GTTCTTGGCTCTAGTTTCTGCC 59.255 50.000 0.00 0.00 45.10 4.85
2093 2278 3.669536 AGTTCTTGGCTCTAGTTTCTGC 58.330 45.455 0.00 0.00 0.00 4.26
2094 2279 6.699642 GCTATAGTTCTTGGCTCTAGTTTCTG 59.300 42.308 0.84 0.00 0.00 3.02
2095 2280 6.381420 TGCTATAGTTCTTGGCTCTAGTTTCT 59.619 38.462 0.84 0.00 0.00 2.52
2096 2281 6.574350 TGCTATAGTTCTTGGCTCTAGTTTC 58.426 40.000 0.84 0.00 0.00 2.78
2097 2282 6.407525 CCTGCTATAGTTCTTGGCTCTAGTTT 60.408 42.308 0.84 0.00 0.00 2.66
2098 2283 5.069781 CCTGCTATAGTTCTTGGCTCTAGTT 59.930 44.000 0.84 0.00 0.00 2.24
2099 2284 4.586841 CCTGCTATAGTTCTTGGCTCTAGT 59.413 45.833 0.84 0.00 0.00 2.57
2100 2285 4.830046 TCCTGCTATAGTTCTTGGCTCTAG 59.170 45.833 0.84 0.00 0.00 2.43
2101 2286 4.585162 GTCCTGCTATAGTTCTTGGCTCTA 59.415 45.833 0.84 0.00 0.00 2.43
2102 2287 3.386402 GTCCTGCTATAGTTCTTGGCTCT 59.614 47.826 0.84 0.00 0.00 4.09
2103 2288 3.386402 AGTCCTGCTATAGTTCTTGGCTC 59.614 47.826 0.84 0.00 0.00 4.70
2104 2289 3.379452 AGTCCTGCTATAGTTCTTGGCT 58.621 45.455 0.84 0.00 0.00 4.75
2105 2290 3.828875 AGTCCTGCTATAGTTCTTGGC 57.171 47.619 0.84 0.00 0.00 4.52
2106 2291 5.606348 AGAAGTCCTGCTATAGTTCTTGG 57.394 43.478 0.84 0.00 32.67 3.61
2107 2292 7.548097 TGTTAGAAGTCCTGCTATAGTTCTTG 58.452 38.462 0.84 0.00 36.85 3.02
2108 2293 7.616150 TCTGTTAGAAGTCCTGCTATAGTTCTT 59.384 37.037 0.84 0.16 36.85 2.52
2109 2294 7.120051 TCTGTTAGAAGTCCTGCTATAGTTCT 58.880 38.462 0.84 4.21 38.57 3.01
2110 2295 7.336161 TCTGTTAGAAGTCCTGCTATAGTTC 57.664 40.000 0.84 0.00 0.00 3.01
2111 2296 7.719871 TTCTGTTAGAAGTCCTGCTATAGTT 57.280 36.000 0.84 0.00 29.50 2.24
2112 2297 7.147811 CCTTTCTGTTAGAAGTCCTGCTATAGT 60.148 40.741 0.84 0.00 35.37 2.12
2113 2298 7.068839 TCCTTTCTGTTAGAAGTCCTGCTATAG 59.931 40.741 0.00 0.00 35.37 1.31
2114 2299 6.895756 TCCTTTCTGTTAGAAGTCCTGCTATA 59.104 38.462 0.00 0.00 35.37 1.31
2115 2300 5.721960 TCCTTTCTGTTAGAAGTCCTGCTAT 59.278 40.000 0.00 0.00 35.37 2.97
2116 2301 5.084519 TCCTTTCTGTTAGAAGTCCTGCTA 58.915 41.667 0.00 0.00 35.37 3.49
2117 2302 3.904339 TCCTTTCTGTTAGAAGTCCTGCT 59.096 43.478 0.00 0.00 35.37 4.24
2118 2303 4.021016 TCTCCTTTCTGTTAGAAGTCCTGC 60.021 45.833 0.00 0.00 35.37 4.85
2119 2304 5.730296 TCTCCTTTCTGTTAGAAGTCCTG 57.270 43.478 0.00 0.00 35.37 3.86
2120 2305 6.078664 TCTTCTCCTTTCTGTTAGAAGTCCT 58.921 40.000 9.93 0.00 43.46 3.85
2121 2306 6.347859 TCTTCTCCTTTCTGTTAGAAGTCC 57.652 41.667 9.93 0.00 43.46 3.85
2122 2307 7.170151 GTGTTCTTCTCCTTTCTGTTAGAAGTC 59.830 40.741 9.93 6.45 43.46 3.01
2123 2308 6.987404 GTGTTCTTCTCCTTTCTGTTAGAAGT 59.013 38.462 9.93 0.00 43.46 3.01
2124 2309 6.144724 CGTGTTCTTCTCCTTTCTGTTAGAAG 59.855 42.308 0.00 0.00 44.05 2.85
2125 2310 5.983720 CGTGTTCTTCTCCTTTCTGTTAGAA 59.016 40.000 0.00 0.00 31.28 2.10
2126 2311 5.068723 ACGTGTTCTTCTCCTTTCTGTTAGA 59.931 40.000 0.00 0.00 0.00 2.10
2127 2312 5.290386 ACGTGTTCTTCTCCTTTCTGTTAG 58.710 41.667 0.00 0.00 0.00 2.34
2128 2313 5.272283 ACGTGTTCTTCTCCTTTCTGTTA 57.728 39.130 0.00 0.00 0.00 2.41
2129 2314 4.138487 ACGTGTTCTTCTCCTTTCTGTT 57.862 40.909 0.00 0.00 0.00 3.16
2130 2315 3.821421 ACGTGTTCTTCTCCTTTCTGT 57.179 42.857 0.00 0.00 0.00 3.41
2131 2316 3.669122 CGTACGTGTTCTTCTCCTTTCTG 59.331 47.826 7.22 0.00 0.00 3.02
2132 2317 3.567164 TCGTACGTGTTCTTCTCCTTTCT 59.433 43.478 16.05 0.00 0.00 2.52
2133 2318 3.667726 GTCGTACGTGTTCTTCTCCTTTC 59.332 47.826 16.05 0.00 0.00 2.62
2134 2319 3.067180 TGTCGTACGTGTTCTTCTCCTTT 59.933 43.478 16.05 0.00 0.00 3.11
2135 2320 2.620115 TGTCGTACGTGTTCTTCTCCTT 59.380 45.455 16.05 0.00 0.00 3.36
2136 2321 2.031333 GTGTCGTACGTGTTCTTCTCCT 60.031 50.000 16.05 0.00 0.00 3.69
2137 2322 2.287188 TGTGTCGTACGTGTTCTTCTCC 60.287 50.000 16.05 0.00 0.00 3.71
2138 2323 2.971915 CTGTGTCGTACGTGTTCTTCTC 59.028 50.000 16.05 1.20 0.00 2.87
2139 2324 2.857489 GCTGTGTCGTACGTGTTCTTCT 60.857 50.000 16.05 0.00 0.00 2.85
2140 2325 1.450905 GCTGTGTCGTACGTGTTCTTC 59.549 52.381 16.05 1.44 0.00 2.87
2141 2326 1.202325 TGCTGTGTCGTACGTGTTCTT 60.202 47.619 16.05 0.00 0.00 2.52
2142 2327 0.382873 TGCTGTGTCGTACGTGTTCT 59.617 50.000 16.05 0.00 0.00 3.01
2143 2328 1.071698 GTTGCTGTGTCGTACGTGTTC 60.072 52.381 16.05 5.49 0.00 3.18
2144 2329 0.925466 GTTGCTGTGTCGTACGTGTT 59.075 50.000 16.05 0.00 0.00 3.32
2145 2330 0.179132 TGTTGCTGTGTCGTACGTGT 60.179 50.000 16.05 0.00 0.00 4.49
2146 2331 0.502695 CTGTTGCTGTGTCGTACGTG 59.497 55.000 16.05 3.24 0.00 4.49
2147 2332 1.213094 GCTGTTGCTGTGTCGTACGT 61.213 55.000 16.05 0.00 36.03 3.57
2148 2333 1.212455 TGCTGTTGCTGTGTCGTACG 61.212 55.000 9.53 9.53 40.48 3.67
2149 2334 0.508641 CTGCTGTTGCTGTGTCGTAC 59.491 55.000 0.00 0.00 40.48 3.67
2150 2335 0.387565 TCTGCTGTTGCTGTGTCGTA 59.612 50.000 0.00 0.00 40.48 3.43
2151 2336 0.461870 TTCTGCTGTTGCTGTGTCGT 60.462 50.000 0.00 0.00 40.48 4.34
2152 2337 0.234106 CTTCTGCTGTTGCTGTGTCG 59.766 55.000 0.00 0.00 40.48 4.35
2153 2338 0.040603 GCTTCTGCTGTTGCTGTGTC 60.041 55.000 0.00 0.00 40.48 3.67
2154 2339 1.779025 CGCTTCTGCTGTTGCTGTGT 61.779 55.000 8.30 0.00 40.48 3.72
2155 2340 1.082300 CGCTTCTGCTGTTGCTGTG 60.082 57.895 8.30 0.00 40.48 3.66
2156 2341 2.901292 GCGCTTCTGCTGTTGCTGT 61.901 57.895 0.00 0.00 40.48 4.40
2157 2342 2.126965 GCGCTTCTGCTGTTGCTG 60.127 61.111 0.00 0.00 40.48 4.41
2158 2343 2.281345 AGCGCTTCTGCTGTTGCT 60.281 55.556 2.64 3.52 45.28 3.91
2165 2350 2.684843 CCAAGTCCAGCGCTTCTGC 61.685 63.158 7.50 0.00 41.50 4.26
2166 2351 2.037136 CCCAAGTCCAGCGCTTCTG 61.037 63.158 7.50 0.00 42.49 3.02
2167 2352 2.348998 CCCAAGTCCAGCGCTTCT 59.651 61.111 7.50 3.60 0.00 2.85
2168 2353 2.747855 CCCCAAGTCCAGCGCTTC 60.748 66.667 7.50 0.75 0.00 3.86
2169 2354 3.553095 GACCCCAAGTCCAGCGCTT 62.553 63.158 7.50 0.00 39.84 4.68
2170 2355 4.021925 GACCCCAAGTCCAGCGCT 62.022 66.667 2.64 2.64 39.84 5.92
2172 2357 4.760047 CCGACCCCAAGTCCAGCG 62.760 72.222 0.00 0.00 43.08 5.18
2173 2358 3.637273 ACCGACCCCAAGTCCAGC 61.637 66.667 0.00 0.00 43.08 4.85
2174 2359 2.347490 CACCGACCCCAAGTCCAG 59.653 66.667 0.00 0.00 43.08 3.86
2175 2360 2.446994 ACACCGACCCCAAGTCCA 60.447 61.111 0.00 0.00 43.08 4.02
2176 2361 2.346365 GACACCGACCCCAAGTCC 59.654 66.667 0.00 0.00 43.08 3.85
2177 2362 2.168666 GAGGACACCGACCCCAAGTC 62.169 65.000 0.00 0.00 42.54 3.01
2178 2363 2.122547 AGGACACCGACCCCAAGT 60.123 61.111 0.00 0.00 0.00 3.16
2179 2364 2.663196 GAGGACACCGACCCCAAG 59.337 66.667 0.00 0.00 0.00 3.61
2180 2365 3.307906 CGAGGACACCGACCCCAA 61.308 66.667 0.00 0.00 0.00 4.12
2184 2369 4.436998 CAGGCGAGGACACCGACC 62.437 72.222 0.00 0.00 35.21 4.79
2188 2373 4.101448 ATGGCAGGCGAGGACACC 62.101 66.667 0.00 0.00 0.00 4.16
2189 2374 2.821366 CATGGCAGGCGAGGACAC 60.821 66.667 0.00 0.00 0.00 3.67
2190 2375 3.315142 GACATGGCAGGCGAGGACA 62.315 63.158 0.00 0.00 0.00 4.02
2191 2376 2.512515 GACATGGCAGGCGAGGAC 60.513 66.667 0.00 0.00 0.00 3.85
2192 2377 4.147449 CGACATGGCAGGCGAGGA 62.147 66.667 9.68 0.00 0.00 3.71
2193 2378 4.457496 ACGACATGGCAGGCGAGG 62.457 66.667 19.28 1.14 0.00 4.63
2194 2379 2.887568 GACGACATGGCAGGCGAG 60.888 66.667 19.28 5.45 0.00 5.03
2195 2380 4.794439 CGACGACATGGCAGGCGA 62.794 66.667 19.28 0.00 0.00 5.54
2196 2381 4.794439 TCGACGACATGGCAGGCG 62.794 66.667 11.73 11.73 0.00 5.52
2197 2382 2.887568 CTCGACGACATGGCAGGC 60.888 66.667 0.00 0.00 0.00 4.85
2198 2383 2.202797 CCTCGACGACATGGCAGG 60.203 66.667 0.00 0.00 0.00 4.85
2199 2384 1.226802 CTCCTCGACGACATGGCAG 60.227 63.158 0.00 0.00 0.00 4.85
2200 2385 2.710902 CCTCCTCGACGACATGGCA 61.711 63.158 0.00 0.00 0.00 4.92
2201 2386 2.105128 CCTCCTCGACGACATGGC 59.895 66.667 0.00 0.00 0.00 4.40
2202 2387 1.433879 GACCTCCTCGACGACATGG 59.566 63.158 0.00 0.00 0.00 3.66
2203 2388 1.062685 CGACCTCCTCGACGACATG 59.937 63.158 0.00 0.00 46.14 3.21
2204 2389 1.376942 ACGACCTCCTCGACGACAT 60.377 57.895 0.00 0.00 46.14 3.06
2205 2390 2.031616 ACGACCTCCTCGACGACA 59.968 61.111 0.00 0.00 46.14 4.35
2206 2391 2.479650 CACGACCTCCTCGACGAC 59.520 66.667 0.00 0.00 46.14 4.34
2207 2392 2.745100 CCACGACCTCCTCGACGA 60.745 66.667 0.00 0.00 46.14 4.20
2208 2393 2.745100 TCCACGACCTCCTCGACG 60.745 66.667 0.00 0.00 46.14 5.12
2209 2394 2.876219 GTCCACGACCTCCTCGAC 59.124 66.667 0.00 0.00 46.14 4.20
2210 2395 2.745100 CGTCCACGACCTCCTCGA 60.745 66.667 0.00 0.00 46.14 4.04
2212 2397 2.876219 GACGTCCACGACCTCCTC 59.124 66.667 3.51 0.00 43.02 3.71
2213 2398 3.054503 CGACGTCCACGACCTCCT 61.055 66.667 10.58 0.00 43.02 3.69
2214 2399 4.112341 CCGACGTCCACGACCTCC 62.112 72.222 10.58 0.00 43.02 4.30
2215 2400 4.112341 CCCGACGTCCACGACCTC 62.112 72.222 10.58 0.00 43.02 3.85
2218 2403 3.621892 CTTCCCCGACGTCCACGAC 62.622 68.421 10.58 0.00 43.02 4.34
2219 2404 3.367743 CTTCCCCGACGTCCACGA 61.368 66.667 10.58 0.00 43.02 4.35
2220 2405 2.814183 CTTCTTCCCCGACGTCCACG 62.814 65.000 10.58 0.00 46.33 4.94
2221 2406 1.080025 CTTCTTCCCCGACGTCCAC 60.080 63.158 10.58 0.00 0.00 4.02
2222 2407 1.530013 GACTTCTTCCCCGACGTCCA 61.530 60.000 10.58 0.00 0.00 4.02
2223 2408 1.214853 GACTTCTTCCCCGACGTCC 59.785 63.158 10.58 0.00 0.00 4.79
2224 2409 1.154073 CGACTTCTTCCCCGACGTC 60.154 63.158 5.18 5.18 0.00 4.34
2225 2410 1.860484 GACGACTTCTTCCCCGACGT 61.860 60.000 0.00 0.00 35.31 4.34
2226 2411 1.154073 GACGACTTCTTCCCCGACG 60.154 63.158 0.00 0.00 0.00 5.12
2227 2412 1.154073 CGACGACTTCTTCCCCGAC 60.154 63.158 0.00 0.00 0.00 4.79
2228 2413 1.580845 GACGACGACTTCTTCCCCGA 61.581 60.000 0.00 0.00 0.00 5.14
2229 2414 1.154073 GACGACGACTTCTTCCCCG 60.154 63.158 0.00 0.00 0.00 5.73
2230 2415 1.154073 CGACGACGACTTCTTCCCC 60.154 63.158 0.00 0.00 42.66 4.81
2231 2416 1.154073 CCGACGACGACTTCTTCCC 60.154 63.158 9.28 0.00 42.66 3.97
2232 2417 1.154073 CCCGACGACGACTTCTTCC 60.154 63.158 9.28 0.00 42.66 3.46
2233 2418 1.154073 CCCCGACGACGACTTCTTC 60.154 63.158 9.28 0.00 42.66 2.87
2234 2419 1.174712 TTCCCCGACGACGACTTCTT 61.175 55.000 9.28 0.00 42.66 2.52
2235 2420 1.584380 CTTCCCCGACGACGACTTCT 61.584 60.000 9.28 0.00 42.66 2.85
2236 2421 1.154073 CTTCCCCGACGACGACTTC 60.154 63.158 9.28 0.00 42.66 3.01
2237 2422 0.606401 TACTTCCCCGACGACGACTT 60.606 55.000 9.28 0.00 42.66 3.01
2238 2423 1.003355 TACTTCCCCGACGACGACT 60.003 57.895 9.28 0.00 42.66 4.18
2239 2424 1.021390 TCTACTTCCCCGACGACGAC 61.021 60.000 9.28 0.00 42.66 4.34
2240 2425 1.021390 GTCTACTTCCCCGACGACGA 61.021 60.000 9.28 0.00 42.66 4.20
2241 2426 1.300971 TGTCTACTTCCCCGACGACG 61.301 60.000 0.00 0.00 39.43 5.12
2242 2427 1.065251 GATGTCTACTTCCCCGACGAC 59.935 57.143 0.00 0.00 0.00 4.34
2243 2428 1.386533 GATGTCTACTTCCCCGACGA 58.613 55.000 0.00 0.00 0.00 4.20
2244 2429 0.029035 CGATGTCTACTTCCCCGACG 59.971 60.000 0.00 0.00 0.00 5.12
2245 2430 0.384669 CCGATGTCTACTTCCCCGAC 59.615 60.000 0.00 0.00 0.00 4.79
2246 2431 1.389609 GCCGATGTCTACTTCCCCGA 61.390 60.000 0.00 0.00 0.00 5.14
2247 2432 1.067582 GCCGATGTCTACTTCCCCG 59.932 63.158 0.00 0.00 0.00 5.73
2248 2433 1.067582 CGCCGATGTCTACTTCCCC 59.932 63.158 0.00 0.00 0.00 4.81
2249 2434 0.248949 GTCGCCGATGTCTACTTCCC 60.249 60.000 0.00 0.00 0.00 3.97
2250 2435 0.248949 GGTCGCCGATGTCTACTTCC 60.249 60.000 0.00 0.00 0.00 3.46
2251 2436 3.253416 GGTCGCCGATGTCTACTTC 57.747 57.895 0.00 0.00 0.00 3.01


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.