Multiple sequence alignment - TraesCS2B01G340900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G340900 chr2B 100.000 6514 0 0 1 6514 486583930 486590443 0.000000e+00 12030.0
1 TraesCS2B01G340900 chr2B 87.342 632 67 7 4888 5508 486770897 486771526 0.000000e+00 712.0
2 TraesCS2B01G340900 chr2B 78.764 631 114 14 4888 5508 486966056 486966676 7.860000e-109 405.0
3 TraesCS2B01G340900 chr2B 87.984 258 31 0 4884 5141 486742419 486742676 8.210000e-79 305.0
4 TraesCS2B01G340900 chr2B 83.983 231 27 6 1007 1235 486741522 486741744 5.120000e-51 213.0
5 TraesCS2B01G340900 chr2B 76.694 369 61 14 1001 1366 486768813 486769159 1.440000e-41 182.0
6 TraesCS2B01G340900 chr2B 94.444 90 5 0 480 569 214532872 214532783 8.810000e-29 139.0
7 TraesCS2B01G340900 chr2B 77.600 250 42 13 6276 6512 753797498 753797250 8.810000e-29 139.0
8 TraesCS2B01G340900 chr2B 75.458 273 47 16 6251 6514 182129112 182129373 1.480000e-21 115.0
9 TraesCS2B01G340900 chr2B 77.444 133 26 4 6202 6333 348015839 348015710 7.000000e-10 76.8
10 TraesCS2B01G340900 chr2B 100.000 28 0 0 1239 1266 495143341 495143368 1.200000e-02 52.8
11 TraesCS2B01G340900 chr2A 92.692 1902 130 3 1965 3859 35948620 35946721 0.000000e+00 2734.0
12 TraesCS2B01G340900 chr2A 92.650 1415 73 13 562 1962 580251697 580253094 0.000000e+00 2008.0
13 TraesCS2B01G340900 chr2A 94.922 1024 44 5 4699 5715 580253195 580254217 0.000000e+00 1596.0
14 TraesCS2B01G340900 chr2A 95.439 570 18 4 3855 4417 13432489 13433057 0.000000e+00 902.0
15 TraesCS2B01G340900 chr2A 93.060 562 29 6 3855 4408 35943714 35943155 0.000000e+00 813.0
16 TraesCS2B01G340900 chr2A 87.334 679 78 4 4837 5515 580282077 580282747 0.000000e+00 771.0
17 TraesCS2B01G340900 chr2A 88.103 622 72 2 4888 5508 580324441 580325061 0.000000e+00 737.0
18 TraesCS2B01G340900 chr2A 90.693 505 21 12 1 482 580251199 580251700 0.000000e+00 649.0
19 TraesCS2B01G340900 chr2A 88.176 296 24 8 6225 6513 580279227 580279518 6.250000e-90 342.0
20 TraesCS2B01G340900 chr2A 93.237 207 10 2 4498 4700 13433292 13433498 1.060000e-77 302.0
21 TraesCS2B01G340900 chr2A 96.795 156 5 0 4501 4656 35942745 35942590 1.800000e-65 261.0
22 TraesCS2B01G340900 chr2A 78.919 370 50 13 1001 1366 580322479 580322824 6.570000e-55 226.0
23 TraesCS2B01G340900 chr2A 83.550 231 29 6 1007 1235 580281237 580281460 2.380000e-49 207.0
24 TraesCS2B01G340900 chr2A 88.710 124 11 3 4584 4705 97849324 97849202 1.460000e-31 148.0
25 TraesCS2B01G340900 chr2A 97.015 67 1 1 636 701 580251709 580251775 1.920000e-20 111.0
26 TraesCS2B01G340900 chr1A 92.538 1903 130 6 1965 3859 70921429 70919531 0.000000e+00 2717.0
27 TraesCS2B01G340900 chr1A 93.292 641 34 3 3855 4488 70916676 70916038 0.000000e+00 937.0
28 TraesCS2B01G340900 chr1A 95.213 188 8 1 4514 4700 70915782 70915595 4.940000e-76 296.0
29 TraesCS2B01G340900 chr4D 92.550 1906 122 12 1967 3859 475127565 475129463 0.000000e+00 2715.0
30 TraesCS2B01G340900 chr4D 87.253 455 30 11 3855 4302 475132282 475132715 1.630000e-135 494.0
31 TraesCS2B01G340900 chr4D 91.489 329 17 9 4293 4614 475138120 475138444 5.990000e-120 442.0
32 TraesCS2B01G340900 chr4D 74.328 335 54 22 6203 6513 455483651 455483977 5.340000e-21 113.0
33 TraesCS2B01G340900 chr6D 92.598 1905 100 18 1965 3859 4795109 4793236 0.000000e+00 2699.0
34 TraesCS2B01G340900 chr6D 92.058 1725 123 10 2143 3859 4793089 4791371 0.000000e+00 2414.0
35 TraesCS2B01G340900 chr6D 94.463 921 50 1 1965 2885 4796994 4796075 0.000000e+00 1417.0
36 TraesCS2B01G340900 chr6D 92.296 649 38 10 3855 4493 4788567 4787921 0.000000e+00 911.0
37 TraesCS2B01G340900 chr6D 94.836 213 8 2 4486 4697 4787900 4787690 4.870000e-86 329.0
38 TraesCS2B01G340900 chr6D 94.444 90 5 0 478 567 199210414 199210325 8.810000e-29 139.0
39 TraesCS2B01G340900 chr1D 90.871 1906 155 15 1965 3859 252286074 252287971 0.000000e+00 2538.0
40 TraesCS2B01G340900 chr1D 84.156 871 100 21 3854 4700 252290855 252291711 0.000000e+00 809.0
41 TraesCS2B01G340900 chr7B 90.771 1907 136 16 1965 3859 538423548 538425426 0.000000e+00 2510.0
42 TraesCS2B01G340900 chr7B 87.377 507 33 5 4195 4700 538426343 538426819 2.650000e-153 553.0
43 TraesCS2B01G340900 chr7B 88.095 210 24 1 5952 6160 709744440 709744231 1.400000e-61 248.0
44 TraesCS2B01G340900 chr7B 73.343 694 101 50 4045 4715 463537816 463538448 5.190000e-41 180.0
45 TraesCS2B01G340900 chr7B 95.402 87 4 0 480 566 747110257 747110343 8.810000e-29 139.0
46 TraesCS2B01G340900 chr5B 90.446 1905 144 14 1965 3859 590706222 590704346 0.000000e+00 2475.0
47 TraesCS2B01G340900 chr5B 87.814 558 65 3 3166 3722 9431446 9432001 0.000000e+00 651.0
48 TraesCS2B01G340900 chr5B 88.716 514 43 5 4195 4706 590703429 590702929 1.200000e-171 614.0
49 TraesCS2B01G340900 chr5B 86.916 214 23 4 5950 6160 267548110 267547899 1.090000e-57 235.0
50 TraesCS2B01G340900 chr5B 98.837 86 1 0 479 564 711245669 711245584 3.150000e-33 154.0
51 TraesCS2B01G340900 chr5B 77.320 291 39 20 6235 6508 491995496 491995776 5.260000e-31 147.0
52 TraesCS2B01G340900 chr5D 88.901 1892 188 17 1979 3857 70149917 70151799 0.000000e+00 2311.0
53 TraesCS2B01G340900 chr5D 75.796 314 59 16 6202 6509 289723866 289724168 6.810000e-30 143.0
54 TraesCS2B01G340900 chr5D 81.203 133 17 7 6389 6514 410079805 410079936 4.160000e-17 100.0
55 TraesCS2B01G340900 chr3A 87.822 1905 212 14 1965 3857 36062196 36060300 0.000000e+00 2215.0
56 TraesCS2B01G340900 chr3A 95.402 87 4 0 480 566 99426185 99426271 8.810000e-29 139.0
57 TraesCS2B01G340900 chr2D 91.737 1416 67 25 562 1962 413263539 413264919 0.000000e+00 1921.0
58 TraesCS2B01G340900 chr2D 94.499 909 28 5 4699 5603 413265017 413265907 0.000000e+00 1382.0
59 TraesCS2B01G340900 chr2D 87.482 679 77 4 4837 5515 413274495 413275165 0.000000e+00 776.0
60 TraesCS2B01G340900 chr2D 87.005 631 71 5 4888 5508 413290575 413291204 0.000000e+00 701.0
61 TraesCS2B01G340900 chr2D 90.081 494 32 7 1 482 413263054 413263542 5.550000e-175 625.0
62 TraesCS2B01G340900 chr2D 93.857 293 14 4 6160 6451 413267140 413267429 7.750000e-119 438.0
63 TraesCS2B01G340900 chr2D 77.532 632 121 15 4889 5508 413774432 413775054 1.730000e-95 361.0
64 TraesCS2B01G340900 chr2D 90.323 279 12 7 5595 5861 413266812 413267087 1.040000e-92 351.0
65 TraesCS2B01G340900 chr2D 79.459 370 48 14 1001 1366 413288624 413288969 3.040000e-58 237.0
66 TraesCS2B01G340900 chr2D 83.913 230 33 3 1007 1235 413273629 413273855 3.960000e-52 217.0
67 TraesCS2B01G340900 chr2D 97.059 68 2 0 5884 5951 413267082 413267149 1.480000e-21 115.0
68 TraesCS2B01G340900 chr2D 97.015 67 1 1 636 701 413263551 413263617 1.920000e-20 111.0
69 TraesCS2B01G340900 chr2D 84.348 115 13 3 6399 6512 636730648 636730758 2.480000e-19 108.0
70 TraesCS2B01G340900 chr5A 87.156 218 23 5 5946 6160 236009841 236010056 6.530000e-60 243.0
71 TraesCS2B01G340900 chr5A 86.385 213 27 2 5952 6163 705304007 705304218 1.410000e-56 231.0
72 TraesCS2B01G340900 chr5A 83.594 128 9 11 6393 6512 596667189 596667312 6.910000e-20 110.0
73 TraesCS2B01G340900 chr7A 87.324 213 23 3 5952 6162 509532052 509531842 2.350000e-59 241.0
74 TraesCS2B01G340900 chr7A 86.636 217 25 3 5948 6161 558746168 558745953 3.040000e-58 237.0
75 TraesCS2B01G340900 chr7A 86.047 215 29 1 5952 6165 579089822 579089608 5.080000e-56 230.0
76 TraesCS2B01G340900 chr4A 87.324 213 23 4 5952 6162 887003 887213 2.350000e-59 241.0
77 TraesCS2B01G340900 chr4A 87.342 79 8 2 5863 5940 534232170 534232093 9.000000e-14 89.8
78 TraesCS2B01G340900 chr6A 86.574 216 23 4 5951 6164 501926586 501926375 3.930000e-57 233.0
79 TraesCS2B01G340900 chr7D 83.824 204 22 7 4501 4700 180831980 180831784 4.010000e-42 183.0
80 TraesCS2B01G340900 chr7D 77.070 314 44 14 4092 4397 180832293 180832000 8.750000e-34 156.0
81 TraesCS2B01G340900 chr7D 90.141 71 7 0 1105 1175 112866857 112866927 6.950000e-15 93.5
82 TraesCS2B01G340900 chr4B 95.699 93 3 1 479 571 37193085 37192994 1.460000e-31 148.0
83 TraesCS2B01G340900 chr4B 81.707 164 26 4 4536 4697 659070641 659070802 4.100000e-27 134.0
84 TraesCS2B01G340900 chr1B 95.455 88 4 0 479 566 628049899 628049812 2.450000e-29 141.0
85 TraesCS2B01G340900 chr1B 90.654 107 6 4 466 570 548535444 548535548 8.810000e-29 139.0
86 TraesCS2B01G340900 chr1B 77.872 235 35 13 6276 6495 161202451 161202219 5.300000e-26 130.0
87 TraesCS2B01G340900 chr1B 87.037 108 6 5 6414 6514 161202351 161202245 1.480000e-21 115.0
88 TraesCS2B01G340900 chr1B 80.833 120 17 5 6399 6514 623284636 623284519 9.000000e-14 89.8
89 TraesCS2B01G340900 chr3B 93.478 92 6 0 479 570 200860768 200860677 3.170000e-28 137.0
90 TraesCS2B01G340900 chr3B 81.897 116 15 4 6399 6511 811510148 811510260 6.950000e-15 93.5
91 TraesCS2B01G340900 chr3D 75.078 321 53 21 6202 6510 569536600 569536905 2.470000e-24 124.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G340900 chr2B 486583930 486590443 6513 False 12030.000000 12030 100.000000 1 6514 1 chr2B.!!$F2 6513
1 TraesCS2B01G340900 chr2B 486768813 486771526 2713 False 447.000000 712 82.018000 1001 5508 2 chr2B.!!$F6 4507
2 TraesCS2B01G340900 chr2B 486966056 486966676 620 False 405.000000 405 78.764000 4888 5508 1 chr2B.!!$F3 620
3 TraesCS2B01G340900 chr2B 486741522 486742676 1154 False 259.000000 305 85.983500 1007 5141 2 chr2B.!!$F5 4134
4 TraesCS2B01G340900 chr2A 35942590 35948620 6030 True 1269.333333 2734 94.182333 1965 4656 3 chr2A.!!$R2 2691
5 TraesCS2B01G340900 chr2A 580251199 580254217 3018 False 1091.000000 2008 93.820000 1 5715 4 chr2A.!!$F2 5714
6 TraesCS2B01G340900 chr2A 13432489 13433498 1009 False 602.000000 902 94.338000 3855 4700 2 chr2A.!!$F1 845
7 TraesCS2B01G340900 chr2A 580322479 580325061 2582 False 481.500000 737 83.511000 1001 5508 2 chr2A.!!$F4 4507
8 TraesCS2B01G340900 chr2A 580279227 580282747 3520 False 440.000000 771 86.353333 1007 6513 3 chr2A.!!$F3 5506
9 TraesCS2B01G340900 chr1A 70915595 70921429 5834 True 1316.666667 2717 93.681000 1965 4700 3 chr1A.!!$R1 2735
10 TraesCS2B01G340900 chr4D 475127565 475132715 5150 False 1604.500000 2715 89.901500 1967 4302 2 chr4D.!!$F3 2335
11 TraesCS2B01G340900 chr6D 4787690 4796994 9304 True 1554.000000 2699 93.250200 1965 4697 5 chr6D.!!$R2 2732
12 TraesCS2B01G340900 chr1D 252286074 252291711 5637 False 1673.500000 2538 87.513500 1965 4700 2 chr1D.!!$F1 2735
13 TraesCS2B01G340900 chr7B 538423548 538426819 3271 False 1531.500000 2510 89.074000 1965 4700 2 chr7B.!!$F3 2735
14 TraesCS2B01G340900 chr5B 590702929 590706222 3293 True 1544.500000 2475 89.581000 1965 4706 2 chr5B.!!$R3 2741
15 TraesCS2B01G340900 chr5B 9431446 9432001 555 False 651.000000 651 87.814000 3166 3722 1 chr5B.!!$F1 556
16 TraesCS2B01G340900 chr5D 70149917 70151799 1882 False 2311.000000 2311 88.901000 1979 3857 1 chr5D.!!$F1 1878
17 TraesCS2B01G340900 chr3A 36060300 36062196 1896 True 2215.000000 2215 87.822000 1965 3857 1 chr3A.!!$R1 1892
18 TraesCS2B01G340900 chr2D 413263054 413267429 4375 False 706.142857 1921 93.510143 1 6451 7 chr2D.!!$F3 6450
19 TraesCS2B01G340900 chr2D 413273629 413275165 1536 False 496.500000 776 85.697500 1007 5515 2 chr2D.!!$F4 4508
20 TraesCS2B01G340900 chr2D 413288624 413291204 2580 False 469.000000 701 83.232000 1001 5508 2 chr2D.!!$F5 4507
21 TraesCS2B01G340900 chr2D 413774432 413775054 622 False 361.000000 361 77.532000 4889 5508 1 chr2D.!!$F1 619

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
873 897 0.034476 CAGAGTGGAGCTCAGCACAA 59.966 55.0 20.74 0.00 46.47 3.33 F
970 994 0.469070 ACCAGCAGGCTCATCTCATC 59.531 55.0 0.00 0.00 39.06 2.92 F
2218 5203 0.108138 ACTATGAGCCCAGTTGCGAC 60.108 55.0 0.00 0.00 36.02 5.19 F
2989 7826 0.527817 CGGACAACTATGAGCCGGTC 60.528 60.0 1.90 0.00 41.17 4.79 F
4370 12447 0.666374 CACAAAAACGAGGGACCCAC 59.334 55.0 14.60 5.39 0.00 4.61 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2172 3272 0.465460 GTCCCAGTTGCAAGTCCACA 60.465 55.0 3.08 0.0 0.00 4.17 R
2314 5299 1.034292 ACTAGCCTCGACCCGTAACC 61.034 60.0 0.00 0.0 0.00 2.85 R
3818 8669 0.242825 CGACCCTTGACTCGCAACTA 59.757 55.0 0.00 0.0 31.96 2.24 R
4401 12478 1.740297 AAAAGTACGTGCACACACCA 58.260 45.0 18.64 0.0 44.40 4.17 R
5801 16142 0.032952 GCCTGTAATATGCCGGTCGA 59.967 55.0 1.90 0.0 0.00 4.20 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
31 32 1.913262 ATGCCGGTCCAGTCAGTCA 60.913 57.895 1.90 0.00 0.00 3.41
315 318 8.926710 GTTATATTACTCTTGATCCCAACATCG 58.073 37.037 0.00 0.00 0.00 3.84
333 336 5.961272 ACATCGACTTTTTCTTTTTGTGGT 58.039 33.333 0.00 0.00 0.00 4.16
484 508 6.900568 CATCTCAGAAAAGATGTGTACTCC 57.099 41.667 5.86 0.00 45.01 3.85
486 510 5.087323 TCTCAGAAAAGATGTGTACTCCCT 58.913 41.667 0.00 0.00 0.00 4.20
487 511 5.186021 TCTCAGAAAAGATGTGTACTCCCTC 59.814 44.000 0.00 0.00 0.00 4.30
488 512 4.223032 TCAGAAAAGATGTGTACTCCCTCC 59.777 45.833 0.00 0.00 0.00 4.30
489 513 3.195825 AGAAAAGATGTGTACTCCCTCCG 59.804 47.826 0.00 0.00 0.00 4.63
491 515 3.377253 AAGATGTGTACTCCCTCCGTA 57.623 47.619 0.00 0.00 0.00 4.02
493 517 3.705051 AGATGTGTACTCCCTCCGTAAA 58.295 45.455 0.00 0.00 0.00 2.01
494 518 3.700038 AGATGTGTACTCCCTCCGTAAAG 59.300 47.826 0.00 0.00 0.00 1.85
495 519 3.159213 TGTGTACTCCCTCCGTAAAGA 57.841 47.619 0.00 0.00 0.00 2.52
496 520 3.499338 TGTGTACTCCCTCCGTAAAGAA 58.501 45.455 0.00 0.00 0.00 2.52
497 521 3.896888 TGTGTACTCCCTCCGTAAAGAAA 59.103 43.478 0.00 0.00 0.00 2.52
498 522 4.529377 TGTGTACTCCCTCCGTAAAGAAAT 59.471 41.667 0.00 0.00 0.00 2.17
499 523 5.716228 TGTGTACTCCCTCCGTAAAGAAATA 59.284 40.000 0.00 0.00 0.00 1.40
500 524 6.381994 TGTGTACTCCCTCCGTAAAGAAATAT 59.618 38.462 0.00 0.00 0.00 1.28
501 525 7.560991 TGTGTACTCCCTCCGTAAAGAAATATA 59.439 37.037 0.00 0.00 0.00 0.86
504 528 7.909485 ACTCCCTCCGTAAAGAAATATAAGA 57.091 36.000 0.00 0.00 0.00 2.10
505 529 7.953752 ACTCCCTCCGTAAAGAAATATAAGAG 58.046 38.462 0.00 0.00 0.00 2.85
507 531 5.634020 CCCTCCGTAAAGAAATATAAGAGCG 59.366 44.000 0.00 0.00 0.00 5.03
508 532 6.214399 CCTCCGTAAAGAAATATAAGAGCGT 58.786 40.000 0.00 0.00 0.00 5.07
509 533 7.365741 CCTCCGTAAAGAAATATAAGAGCGTA 58.634 38.462 0.00 0.00 0.00 4.42
510 534 8.027771 CCTCCGTAAAGAAATATAAGAGCGTAT 58.972 37.037 0.00 0.00 0.00 3.06
528 552 9.775854 AGAGCGTATAGATTACTAAAGTAGTGA 57.224 33.333 0.00 0.00 39.81 3.41
538 562 9.512435 GATTACTAAAGTAGTGATCTAAACGCA 57.488 33.333 11.11 0.00 44.10 5.24
539 563 8.679288 TTACTAAAGTAGTGATCTAAACGCAC 57.321 34.615 0.00 0.00 39.81 5.34
542 566 8.517878 ACTAAAGTAGTGATCTAAACGCACTTA 58.482 33.333 0.00 0.00 42.40 2.24
543 567 7.578169 AAAGTAGTGATCTAAACGCACTTAC 57.422 36.000 0.00 0.00 42.40 2.34
546 570 7.321153 AGTAGTGATCTAAACGCACTTACATT 58.679 34.615 0.00 0.00 42.40 2.71
547 571 7.817962 AGTAGTGATCTAAACGCACTTACATTT 59.182 33.333 0.00 0.00 42.40 2.32
548 572 6.831769 AGTGATCTAAACGCACTTACATTTG 58.168 36.000 0.00 0.00 39.69 2.32
549 573 6.426937 AGTGATCTAAACGCACTTACATTTGT 59.573 34.615 0.00 0.00 39.69 2.83
550 574 7.041372 AGTGATCTAAACGCACTTACATTTGTT 60.041 33.333 0.00 0.00 39.69 2.83
551 575 7.589954 GTGATCTAAACGCACTTACATTTGTTT 59.410 33.333 0.00 0.00 34.32 2.83
553 577 8.944212 ATCTAAACGCACTTACATTTGTTTAC 57.056 30.769 0.00 0.00 32.41 2.01
554 578 7.917597 TCTAAACGCACTTACATTTGTTTACA 58.082 30.769 0.00 0.00 32.41 2.41
556 580 5.994887 ACGCACTTACATTTGTTTACAGA 57.005 34.783 0.00 0.00 0.00 3.41
557 581 5.985781 ACGCACTTACATTTGTTTACAGAG 58.014 37.500 0.00 0.00 0.00 3.35
558 582 5.049680 ACGCACTTACATTTGTTTACAGAGG 60.050 40.000 0.00 0.00 0.00 3.69
559 583 5.616866 CGCACTTACATTTGTTTACAGAGGG 60.617 44.000 0.00 0.00 0.00 4.30
560 584 5.472137 GCACTTACATTTGTTTACAGAGGGA 59.528 40.000 0.00 0.00 0.00 4.20
561 585 6.348540 GCACTTACATTTGTTTACAGAGGGAG 60.349 42.308 0.00 0.00 0.00 4.30
562 586 6.710744 CACTTACATTTGTTTACAGAGGGAGT 59.289 38.462 0.00 0.00 0.00 3.85
563 587 7.876068 CACTTACATTTGTTTACAGAGGGAGTA 59.124 37.037 0.00 0.00 0.00 2.59
564 588 7.876582 ACTTACATTTGTTTACAGAGGGAGTAC 59.123 37.037 0.00 0.00 0.00 2.73
580 604 4.380339 GGGAGTACTAAAGACTGGACGAAC 60.380 50.000 0.00 0.00 0.00 3.95
606 630 5.529060 GGCATACAAGGAGAAAACTAGATGG 59.471 44.000 0.00 0.00 0.00 3.51
628 652 0.822164 TTGAGACTAGCCGCCCTAAC 59.178 55.000 0.00 0.00 0.00 2.34
694 718 3.306613 AGACTAGCCGCCCTAAACTAAT 58.693 45.455 0.00 0.00 0.00 1.73
873 897 0.034476 CAGAGTGGAGCTCAGCACAA 59.966 55.000 20.74 0.00 46.47 3.33
943 967 4.440880 CATACCTCCTCTGCTCTTTGAAG 58.559 47.826 0.00 0.00 0.00 3.02
969 993 0.917533 AACCAGCAGGCTCATCTCAT 59.082 50.000 0.00 0.00 39.06 2.90
970 994 0.469070 ACCAGCAGGCTCATCTCATC 59.531 55.000 0.00 0.00 39.06 2.92
971 995 0.759959 CCAGCAGGCTCATCTCATCT 59.240 55.000 0.00 0.00 0.00 2.90
972 996 1.270412 CCAGCAGGCTCATCTCATCTC 60.270 57.143 0.00 0.00 0.00 2.75
973 997 1.413077 CAGCAGGCTCATCTCATCTCA 59.587 52.381 0.00 0.00 0.00 3.27
1254 2269 4.913924 TGCAATTTTTGTTGTTGTTGTTGC 59.086 33.333 0.00 0.00 39.69 4.17
1256 2271 5.059465 GCAATTTTTGTTGTTGTTGTTGCTG 59.941 36.000 0.00 0.00 37.16 4.41
1257 2272 3.802722 TTTTGTTGTTGTTGTTGCTGC 57.197 38.095 0.00 0.00 0.00 5.25
1260 2275 0.646895 GTTGTTGTTGTTGCTGCTGC 59.353 50.000 8.89 8.89 40.20 5.25
1387 2411 0.586802 AGTTTTCGCCGTTTCAGAGC 59.413 50.000 0.00 0.00 0.00 4.09
1407 2431 1.949631 GCGCGGCAGATGTACCTAC 60.950 63.158 8.83 0.00 0.00 3.18
1517 2556 5.062934 TGACATATAAACACGCACAGCTAAC 59.937 40.000 0.00 0.00 0.00 2.34
1522 2561 0.600255 ACACGCACAGCTAACAGGAC 60.600 55.000 0.00 0.00 0.00 3.85
1824 2898 4.033358 CACGGTATGCTTCAGACTTCATTC 59.967 45.833 0.00 0.00 0.00 2.67
1827 2901 5.689514 CGGTATGCTTCAGACTTCATTCTAG 59.310 44.000 0.00 0.00 0.00 2.43
1852 2929 6.741801 GCTCCTTTATTATAGTGGGAGTGACC 60.742 46.154 13.97 0.00 41.46 4.02
1854 2931 6.849697 TCCTTTATTATAGTGGGAGTGACCAT 59.150 38.462 0.00 0.00 43.59 3.55
1855 2932 6.936900 CCTTTATTATAGTGGGAGTGACCATG 59.063 42.308 0.00 0.00 43.59 3.66
1875 2973 2.288729 TGCATGCGCTAATCATCTTGTC 59.711 45.455 14.09 0.00 39.64 3.18
1876 2974 2.288729 GCATGCGCTAATCATCTTGTCA 59.711 45.455 9.73 0.00 34.30 3.58
1881 2979 4.271776 TGCGCTAATCATCTTGTCAATCTG 59.728 41.667 9.73 0.00 0.00 2.90
2172 3272 1.661821 GCTCAGTTGCGTGTCGAGT 60.662 57.895 0.00 0.00 0.00 4.18
2218 5203 0.108138 ACTATGAGCCCAGTTGCGAC 60.108 55.000 0.00 0.00 36.02 5.19
2262 5247 2.621055 TGAAACACAACTACATGCCCAC 59.379 45.455 0.00 0.00 0.00 4.61
2313 5298 3.307782 AGACAAAAACAACTACGTGGTCG 59.692 43.478 4.56 0.00 43.34 4.79
2314 5299 2.352342 ACAAAAACAACTACGTGGTCGG 59.648 45.455 4.56 3.48 41.85 4.79
2368 5353 2.235891 GAAAATAACTATGGGGCCGGG 58.764 52.381 2.18 0.00 0.00 5.73
2392 5377 1.442526 GGTCGATGATGGGCTTGCAG 61.443 60.000 0.00 0.00 0.00 4.41
2399 5384 3.292481 ATGGGCTTGCAGGTGGGAG 62.292 63.158 0.00 0.00 0.00 4.30
2437 5422 0.809636 GTTGCAAAGTTGGGGTGTGC 60.810 55.000 0.00 0.00 35.75 4.57
2658 5644 1.760613 AGTTCCGAGTTGAGTGTGGAA 59.239 47.619 0.00 0.00 36.41 3.53
2753 6179 1.153745 GCTCCAGTTGCGAGTCGAT 60.154 57.895 18.61 0.00 0.00 3.59
2881 7708 2.430332 CTGGCAACTGGGAAGAAACAAA 59.570 45.455 0.00 0.00 37.61 2.83
2891 7718 6.098266 ACTGGGAAGAAACAAATTATATGGGC 59.902 38.462 0.00 0.00 0.00 5.36
2893 7720 5.602561 GGGAAGAAACAAATTATATGGGCCT 59.397 40.000 4.53 0.00 0.00 5.19
2933 7762 4.280677 TGGACTTGCAAGTGGGATAAAAAG 59.719 41.667 35.67 4.06 39.88 2.27
2989 7826 0.527817 CGGACAACTATGAGCCGGTC 60.528 60.000 1.90 0.00 41.17 4.79
3025 7862 3.412386 GACTTGCAACTGGGACAACTAT 58.588 45.455 0.00 0.00 38.70 2.12
3076 7913 2.699954 CGGACTTGCAACTAGGACAAT 58.300 47.619 0.00 0.00 0.00 2.71
3104 7942 7.480760 AAAACTATGGGCATAATTGTGAGTT 57.519 32.000 6.35 3.68 0.00 3.01
3124 7962 1.065491 TGAGTGTGGACTTGCAACTGT 60.065 47.619 0.00 0.00 30.16 3.55
3130 7968 3.814842 TGTGGACTTGCAACTGTGATAAG 59.185 43.478 0.00 0.00 0.00 1.73
3159 7997 1.991121 ACCGACCTAGTTGTGAGTCA 58.009 50.000 0.00 0.00 0.00 3.41
3195 8033 4.650972 ACTGGGACAAAAATACAGGCTA 57.349 40.909 0.00 0.00 38.70 3.93
3362 8201 1.004862 TGGGTCCAGTTGTGTGTCAAA 59.995 47.619 0.00 0.00 37.81 2.69
3464 8303 1.363744 GTCGAGGATGGACTTGCAAG 58.636 55.000 24.84 24.84 40.97 4.01
3493 8332 5.350640 ACAACTACAAAATTACGAGCCTAGC 59.649 40.000 0.00 0.00 0.00 3.42
3552 8391 5.855395 ACAAACTACGAGATGAGTTACGAAC 59.145 40.000 0.00 0.00 34.81 3.95
3618 8462 3.582647 TGTGAGACATGGTGGACTTACAT 59.417 43.478 0.00 0.00 0.00 2.29
3635 8479 7.254863 GGACTTACATTTGACACGGAAAAAGTA 60.255 37.037 0.00 0.00 0.00 2.24
3648 8492 4.617762 CGGAAAAAGTAAGACTCGGTAGCT 60.618 45.833 0.00 0.00 0.00 3.32
3650 8494 6.035217 GGAAAAAGTAAGACTCGGTAGCTAG 58.965 44.000 0.00 0.00 0.00 3.42
3779 8630 3.715628 AAATGCCAGTTGTGAGTTGAC 57.284 42.857 0.00 0.00 0.00 3.18
3818 8669 5.542635 TGGGACAACTACAAACTATGAGACT 59.457 40.000 0.00 0.00 31.92 3.24
3840 8691 2.126031 GCGAGTCAAGGGTCGACC 60.126 66.667 27.04 27.04 38.50 4.79
3873 11866 9.703892 TGGGATAAAACACTTTCATTTTGTATG 57.296 29.630 0.00 0.00 30.80 2.39
4017 12010 1.220749 GGAGGTATGCAGTTGCGGA 59.779 57.895 0.00 0.00 45.83 5.54
4086 12079 7.254137 TCTGACACGAACAAAAATCATGAAAA 58.746 30.769 0.00 0.00 0.00 2.29
4184 12192 2.994578 GCTTCTCTCAAAACCGGTAGAC 59.005 50.000 8.00 0.00 0.00 2.59
4234 12270 1.828660 ACATACGCTCCGGGGAGAG 60.829 63.158 13.81 17.15 44.53 3.20
4361 12436 1.737363 GCCCACAAAGCACAAAAACGA 60.737 47.619 0.00 0.00 0.00 3.85
4370 12447 0.666374 CACAAAAACGAGGGACCCAC 59.334 55.000 14.60 5.39 0.00 4.61
4417 12494 1.594293 GCTGGTGTGTGCACGTACT 60.594 57.895 13.13 0.00 46.13 2.73
4472 12551 2.954753 GAGGCCACAAAGCGACACG 61.955 63.158 5.01 0.00 0.00 4.49
4484 12563 1.807165 CGACACGGGACATCAGCTG 60.807 63.158 7.63 7.63 0.00 4.24
4626 13022 5.333035 CGAACAGTCTGCACGAATCTTAAAA 60.333 40.000 12.03 0.00 0.00 1.52
4820 14210 7.814642 AGCATGTTCTCTGTTTAGAAAATCAG 58.185 34.615 0.00 0.00 37.24 2.90
4822 14212 7.536622 GCATGTTCTCTGTTTAGAAAATCAGTG 59.463 37.037 0.00 0.00 37.24 3.66
4823 14213 8.777413 CATGTTCTCTGTTTAGAAAATCAGTGA 58.223 33.333 0.00 0.00 37.24 3.41
5160 14553 1.153901 ATGTACGACTTCCGCACGG 60.154 57.895 1.73 1.73 43.32 4.94
5554 14971 0.747852 TTGGCGCTGTATGGATCGTA 59.252 50.000 7.64 0.00 0.00 3.43
5557 14974 1.726791 GGCGCTGTATGGATCGTAATG 59.273 52.381 7.64 0.00 0.00 1.90
5589 15006 1.462616 TCCTCATTGCAATGAACCCG 58.537 50.000 34.91 25.09 44.20 5.28
5599 15016 3.279434 GCAATGAACCCGGTCTTTATCT 58.721 45.455 0.00 0.00 0.00 1.98
5653 15993 3.003173 CCTGAGGCCAACCCGAGA 61.003 66.667 5.01 0.00 39.21 4.04
5728 16069 1.335506 CCACGTCGGGTTTTCAAATGG 60.336 52.381 0.00 0.00 0.00 3.16
5757 16098 2.292828 ATAACACACCAAAGCCAGCT 57.707 45.000 0.00 0.00 0.00 4.24
5789 16130 7.681939 TTCAAAATAATAGAGTGACCACACC 57.318 36.000 2.78 0.00 46.99 4.16
5791 16132 6.878923 TCAAAATAATAGAGTGACCACACCAG 59.121 38.462 2.78 0.00 46.99 4.00
5801 16142 2.305635 TGACCACACCAGAATGCTACAT 59.694 45.455 0.00 0.00 31.97 2.29
5806 16147 2.205074 CACCAGAATGCTACATCGACC 58.795 52.381 0.00 0.00 31.97 4.79
5817 16158 3.613193 GCTACATCGACCGGCATATTACA 60.613 47.826 0.00 0.00 0.00 2.41
5831 16172 4.022849 GCATATTACAGGCCATCAAAGGAC 60.023 45.833 5.01 0.00 36.73 3.85
5833 16174 0.623723 TACAGGCCATCAAAGGACCC 59.376 55.000 5.01 0.00 37.41 4.46
5836 16177 0.332972 AGGCCATCAAAGGACCCTTC 59.667 55.000 5.01 0.00 37.41 3.46
5873 16214 2.460669 CCCCCTCCTTGATTTTTCAGG 58.539 52.381 0.00 0.00 0.00 3.86
5874 16215 2.042979 CCCCCTCCTTGATTTTTCAGGA 59.957 50.000 0.00 0.00 0.00 3.86
5875 16216 3.359950 CCCCTCCTTGATTTTTCAGGAG 58.640 50.000 7.39 7.39 44.13 3.69
5878 16219 4.039603 CTCCTTGATTTTTCAGGAGGGT 57.960 45.455 6.56 0.00 41.65 4.34
5879 16220 3.760684 CTCCTTGATTTTTCAGGAGGGTG 59.239 47.826 6.56 0.00 41.65 4.61
5880 16221 2.827921 CCTTGATTTTTCAGGAGGGTGG 59.172 50.000 0.00 0.00 0.00 4.61
5881 16222 2.603075 TGATTTTTCAGGAGGGTGGG 57.397 50.000 0.00 0.00 0.00 4.61
5882 16223 1.077005 TGATTTTTCAGGAGGGTGGGG 59.923 52.381 0.00 0.00 0.00 4.96
5883 16224 0.252239 ATTTTTCAGGAGGGTGGGGC 60.252 55.000 0.00 0.00 0.00 5.80
5884 16225 2.380571 TTTTTCAGGAGGGTGGGGCC 62.381 60.000 0.00 0.00 0.00 5.80
5885 16226 3.829311 TTTCAGGAGGGTGGGGCCT 62.829 63.158 0.84 0.00 37.43 5.19
5886 16227 3.829311 TTCAGGAGGGTGGGGCCTT 62.829 63.158 0.84 0.00 37.43 4.35
5887 16228 3.732849 CAGGAGGGTGGGGCCTTC 61.733 72.222 0.84 0.00 42.15 3.46
5945 16286 1.070601 ACTAACCCCGTAAAAGCGTGT 59.929 47.619 0.00 0.00 0.00 4.49
5946 16287 2.298729 ACTAACCCCGTAAAAGCGTGTA 59.701 45.455 0.00 0.00 0.00 2.90
5947 16288 2.252976 AACCCCGTAAAAGCGTGTAA 57.747 45.000 0.00 0.00 0.00 2.41
5948 16289 1.799544 ACCCCGTAAAAGCGTGTAAG 58.200 50.000 0.00 0.00 0.00 2.34
5949 16290 1.344114 ACCCCGTAAAAGCGTGTAAGA 59.656 47.619 0.00 0.00 0.00 2.10
5950 16291 1.997606 CCCCGTAAAAGCGTGTAAGAG 59.002 52.381 0.00 0.00 0.00 2.85
5951 16292 1.997606 CCCGTAAAAGCGTGTAAGAGG 59.002 52.381 0.00 0.00 0.00 3.69
5952 16293 1.997606 CCGTAAAAGCGTGTAAGAGGG 59.002 52.381 0.00 0.00 0.00 4.30
5953 16294 2.353011 CCGTAAAAGCGTGTAAGAGGGA 60.353 50.000 0.00 0.00 0.00 4.20
5954 16295 2.665052 CGTAAAAGCGTGTAAGAGGGAC 59.335 50.000 0.00 0.00 0.00 4.46
5955 16296 1.792006 AAAAGCGTGTAAGAGGGACG 58.208 50.000 0.00 0.00 36.18 4.79
5956 16297 0.963962 AAAGCGTGTAAGAGGGACGA 59.036 50.000 0.00 0.00 35.05 4.20
5957 16298 0.526662 AAGCGTGTAAGAGGGACGAG 59.473 55.000 0.00 0.00 35.05 4.18
5958 16299 0.322277 AGCGTGTAAGAGGGACGAGA 60.322 55.000 0.00 0.00 35.05 4.04
5959 16300 0.179169 GCGTGTAAGAGGGACGAGAC 60.179 60.000 0.00 0.00 35.05 3.36
5960 16301 1.451067 CGTGTAAGAGGGACGAGACT 58.549 55.000 0.00 0.00 35.05 3.24
5961 16302 1.811359 CGTGTAAGAGGGACGAGACTT 59.189 52.381 0.00 0.00 35.05 3.01
5962 16303 2.414293 CGTGTAAGAGGGACGAGACTTG 60.414 54.545 0.00 0.00 35.05 3.16
5963 16304 1.544691 TGTAAGAGGGACGAGACTTGC 59.455 52.381 0.00 0.00 0.00 4.01
5964 16305 1.135053 GTAAGAGGGACGAGACTTGCC 60.135 57.143 0.00 0.00 0.00 4.52
5965 16306 0.543174 AAGAGGGACGAGACTTGCCT 60.543 55.000 0.00 0.00 37.55 4.75
5966 16307 1.216710 GAGGGACGAGACTTGCCTG 59.783 63.158 0.00 0.00 34.37 4.85
5967 16308 1.534235 AGGGACGAGACTTGCCTGT 60.534 57.895 0.00 0.00 32.65 4.00
5968 16309 1.122019 AGGGACGAGACTTGCCTGTT 61.122 55.000 0.00 0.00 32.65 3.16
5969 16310 0.670854 GGGACGAGACTTGCCTGTTC 60.671 60.000 0.00 0.00 0.00 3.18
5970 16311 0.670854 GGACGAGACTTGCCTGTTCC 60.671 60.000 0.00 0.00 0.00 3.62
5971 16312 0.670854 GACGAGACTTGCCTGTTCCC 60.671 60.000 0.00 0.00 0.00 3.97
5972 16313 1.122019 ACGAGACTTGCCTGTTCCCT 61.122 55.000 0.00 0.00 0.00 4.20
5973 16314 0.390472 CGAGACTTGCCTGTTCCCTC 60.390 60.000 0.00 0.00 0.00 4.30
5974 16315 0.035915 GAGACTTGCCTGTTCCCTCC 60.036 60.000 0.00 0.00 0.00 4.30
5975 16316 1.376037 GACTTGCCTGTTCCCTCCG 60.376 63.158 0.00 0.00 0.00 4.63
5976 16317 2.747855 CTTGCCTGTTCCCTCCGC 60.748 66.667 0.00 0.00 0.00 5.54
5977 16318 4.344865 TTGCCTGTTCCCTCCGCC 62.345 66.667 0.00 0.00 0.00 6.13
5979 16320 4.785453 GCCTGTTCCCTCCGCCTG 62.785 72.222 0.00 0.00 0.00 4.85
5980 16321 4.785453 CCTGTTCCCTCCGCCTGC 62.785 72.222 0.00 0.00 0.00 4.85
5983 16324 4.699522 GTTCCCTCCGCCTGCGTT 62.700 66.667 10.94 0.00 37.81 4.84
5984 16325 4.388499 TTCCCTCCGCCTGCGTTC 62.388 66.667 10.94 0.00 37.81 3.95
5986 16327 4.473520 CCCTCCGCCTGCGTTCAT 62.474 66.667 10.94 0.00 37.81 2.57
5987 16328 2.892425 CCTCCGCCTGCGTTCATC 60.892 66.667 10.94 0.00 37.81 2.92
5988 16329 2.185350 CTCCGCCTGCGTTCATCT 59.815 61.111 10.94 0.00 37.81 2.90
5989 16330 2.125552 TCCGCCTGCGTTCATCTG 60.126 61.111 10.94 0.00 37.81 2.90
5990 16331 2.434884 CCGCCTGCGTTCATCTGT 60.435 61.111 10.94 0.00 37.81 3.41
5991 16332 2.743752 CCGCCTGCGTTCATCTGTG 61.744 63.158 10.94 0.00 37.81 3.66
5992 16333 2.482374 GCCTGCGTTCATCTGTGC 59.518 61.111 0.00 0.00 0.00 4.57
5993 16334 2.037136 GCCTGCGTTCATCTGTGCT 61.037 57.895 0.00 0.00 0.00 4.40
5994 16335 1.975363 GCCTGCGTTCATCTGTGCTC 61.975 60.000 0.00 0.00 0.00 4.26
5995 16336 1.364626 CCTGCGTTCATCTGTGCTCC 61.365 60.000 0.00 0.00 0.00 4.70
5996 16337 1.364626 CTGCGTTCATCTGTGCTCCC 61.365 60.000 0.00 0.00 0.00 4.30
5997 16338 2.456119 GCGTTCATCTGTGCTCCCG 61.456 63.158 0.00 0.00 0.00 5.14
5998 16339 2.456119 CGTTCATCTGTGCTCCCGC 61.456 63.158 0.00 0.00 0.00 6.13
5999 16340 1.375908 GTTCATCTGTGCTCCCGCA 60.376 57.895 0.00 0.00 45.60 5.69
6007 16348 2.183300 TGCTCCCGCATACGTGAC 59.817 61.111 0.00 0.00 42.25 3.67
6008 16349 2.183300 GCTCCCGCATACGTGACA 59.817 61.111 0.00 0.00 37.70 3.58
6009 16350 1.227263 GCTCCCGCATACGTGACAT 60.227 57.895 0.00 0.00 37.70 3.06
6010 16351 1.490693 GCTCCCGCATACGTGACATG 61.491 60.000 0.00 0.00 37.70 3.21
6011 16352 0.102300 CTCCCGCATACGTGACATGA 59.898 55.000 0.00 0.00 37.70 3.07
6012 16353 0.750249 TCCCGCATACGTGACATGAT 59.250 50.000 0.00 0.00 37.70 2.45
6013 16354 1.138069 TCCCGCATACGTGACATGATT 59.862 47.619 0.00 0.00 37.70 2.57
6014 16355 1.939934 CCCGCATACGTGACATGATTT 59.060 47.619 0.00 0.00 37.70 2.17
6015 16356 2.286359 CCCGCATACGTGACATGATTTG 60.286 50.000 0.00 0.00 37.70 2.32
6016 16357 2.607180 CCGCATACGTGACATGATTTGA 59.393 45.455 0.00 0.00 37.70 2.69
6017 16358 3.248363 CCGCATACGTGACATGATTTGAT 59.752 43.478 0.00 0.00 37.70 2.57
6018 16359 4.260743 CCGCATACGTGACATGATTTGATT 60.261 41.667 0.00 0.00 37.70 2.57
6019 16360 4.667504 CGCATACGTGACATGATTTGATTG 59.332 41.667 0.00 0.00 33.53 2.67
6020 16361 5.502220 CGCATACGTGACATGATTTGATTGA 60.502 40.000 0.00 0.00 33.53 2.57
6021 16362 6.257423 GCATACGTGACATGATTTGATTGAA 58.743 36.000 0.00 0.00 0.00 2.69
6022 16363 6.746822 GCATACGTGACATGATTTGATTGAAA 59.253 34.615 0.00 0.00 0.00 2.69
6023 16364 7.433131 GCATACGTGACATGATTTGATTGAAAT 59.567 33.333 0.00 0.00 36.94 2.17
6024 16365 9.934190 CATACGTGACATGATTTGATTGAAATA 57.066 29.630 0.00 0.00 34.18 1.40
6027 16368 9.689976 ACGTGACATGATTTGATTGAAATAAAA 57.310 25.926 0.00 0.00 34.18 1.52
6037 16378 9.617523 ATTTGATTGAAATAAAATAAGGCCTGG 57.382 29.630 5.69 0.00 32.10 4.45
6038 16379 6.581712 TGATTGAAATAAAATAAGGCCTGGC 58.418 36.000 5.69 11.05 0.00 4.85
6050 16391 2.286121 CCTGGCCTCACCCCCTTA 60.286 66.667 3.32 0.00 37.83 2.69
6051 16392 1.928567 CCTGGCCTCACCCCCTTAA 60.929 63.158 3.32 0.00 37.83 1.85
6052 16393 1.506028 CCTGGCCTCACCCCCTTAAA 61.506 60.000 3.32 0.00 37.83 1.52
6053 16394 0.407918 CTGGCCTCACCCCCTTAAAA 59.592 55.000 3.32 0.00 37.83 1.52
6054 16395 1.007118 CTGGCCTCACCCCCTTAAAAT 59.993 52.381 3.32 0.00 37.83 1.82
6055 16396 1.006639 TGGCCTCACCCCCTTAAAATC 59.993 52.381 3.32 0.00 37.83 2.17
6056 16397 1.006639 GGCCTCACCCCCTTAAAATCA 59.993 52.381 0.00 0.00 0.00 2.57
6057 16398 2.379005 GCCTCACCCCCTTAAAATCAG 58.621 52.381 0.00 0.00 0.00 2.90
6058 16399 2.950418 GCCTCACCCCCTTAAAATCAGG 60.950 54.545 0.00 0.00 0.00 3.86
6067 16408 5.646692 CCCTTAAAATCAGGGGTAGATGA 57.353 43.478 0.00 0.00 46.90 2.92
6068 16409 6.206180 CCCTTAAAATCAGGGGTAGATGAT 57.794 41.667 0.00 0.00 46.90 2.45
6069 16410 6.614657 CCCTTAAAATCAGGGGTAGATGATT 58.385 40.000 0.00 0.00 46.90 2.57
6070 16411 7.755618 CCCTTAAAATCAGGGGTAGATGATTA 58.244 38.462 1.20 0.00 46.90 1.75
6071 16412 7.885399 CCCTTAAAATCAGGGGTAGATGATTAG 59.115 40.741 1.20 0.00 46.90 1.73
6072 16413 8.660435 CCTTAAAATCAGGGGTAGATGATTAGA 58.340 37.037 1.20 0.00 43.56 2.10
6077 16418 9.621239 AAATCAGGGGTAGATGATTAGATTAGA 57.379 33.333 1.20 0.00 43.56 2.10
6078 16419 9.621239 AATCAGGGGTAGATGATTAGATTAGAA 57.379 33.333 0.00 0.00 42.77 2.10
6079 16420 9.621239 ATCAGGGGTAGATGATTAGATTAGAAA 57.379 33.333 0.00 0.00 32.20 2.52
6080 16421 9.094578 TCAGGGGTAGATGATTAGATTAGAAAG 57.905 37.037 0.00 0.00 0.00 2.62
6081 16422 9.094578 CAGGGGTAGATGATTAGATTAGAAAGA 57.905 37.037 0.00 0.00 0.00 2.52
6082 16423 9.676129 AGGGGTAGATGATTAGATTAGAAAGAA 57.324 33.333 0.00 0.00 0.00 2.52
6115 16456 5.776173 AAGATAGTCGTAGGATGAAGTGG 57.224 43.478 0.00 0.00 0.00 4.00
6116 16457 5.050126 AGATAGTCGTAGGATGAAGTGGA 57.950 43.478 0.00 0.00 0.00 4.02
6117 16458 5.446860 AGATAGTCGTAGGATGAAGTGGAA 58.553 41.667 0.00 0.00 0.00 3.53
6118 16459 5.892119 AGATAGTCGTAGGATGAAGTGGAAA 59.108 40.000 0.00 0.00 0.00 3.13
6119 16460 4.189639 AGTCGTAGGATGAAGTGGAAAC 57.810 45.455 0.00 0.00 0.00 2.78
6120 16461 3.576982 AGTCGTAGGATGAAGTGGAAACA 59.423 43.478 0.00 0.00 38.70 2.83
6131 16472 1.002624 TGGAAACACGGATGGGAGC 60.003 57.895 0.00 0.00 33.40 4.70
6132 16473 1.002624 GGAAACACGGATGGGAGCA 60.003 57.895 0.00 0.00 0.00 4.26
6133 16474 1.305930 GGAAACACGGATGGGAGCAC 61.306 60.000 0.00 0.00 0.00 4.40
6134 16475 1.635663 GAAACACGGATGGGAGCACG 61.636 60.000 0.00 0.00 0.00 5.34
6135 16476 3.605749 AACACGGATGGGAGCACGG 62.606 63.158 0.00 0.00 0.00 4.94
6136 16477 4.838152 CACGGATGGGAGCACGGG 62.838 72.222 0.00 0.00 0.00 5.28
6138 16479 3.781307 CGGATGGGAGCACGGGAA 61.781 66.667 0.00 0.00 0.00 3.97
6139 16480 2.190578 GGATGGGAGCACGGGAAG 59.809 66.667 0.00 0.00 0.00 3.46
6140 16481 2.190578 GATGGGAGCACGGGAAGG 59.809 66.667 0.00 0.00 0.00 3.46
6141 16482 3.406595 GATGGGAGCACGGGAAGGG 62.407 68.421 0.00 0.00 0.00 3.95
6142 16483 3.943137 ATGGGAGCACGGGAAGGGA 62.943 63.158 0.00 0.00 0.00 4.20
6143 16484 3.787001 GGGAGCACGGGAAGGGAG 61.787 72.222 0.00 0.00 0.00 4.30
6144 16485 4.475135 GGAGCACGGGAAGGGAGC 62.475 72.222 0.00 0.00 0.00 4.70
6145 16486 3.706373 GAGCACGGGAAGGGAGCA 61.706 66.667 0.00 0.00 0.00 4.26
6146 16487 3.672295 GAGCACGGGAAGGGAGCAG 62.672 68.421 0.00 0.00 0.00 4.24
6147 16488 4.785453 GCACGGGAAGGGAGCAGG 62.785 72.222 0.00 0.00 0.00 4.85
6148 16489 4.785453 CACGGGAAGGGAGCAGGC 62.785 72.222 0.00 0.00 0.00 4.85
6150 16491 4.033776 CGGGAAGGGAGCAGGCAA 62.034 66.667 0.00 0.00 0.00 4.52
6151 16492 2.044551 GGGAAGGGAGCAGGCAAG 60.045 66.667 0.00 0.00 0.00 4.01
6152 16493 2.753446 GGAAGGGAGCAGGCAAGC 60.753 66.667 0.00 0.00 0.00 4.01
6153 16494 2.753446 GAAGGGAGCAGGCAAGCC 60.753 66.667 2.02 2.02 34.23 4.35
6154 16495 4.729918 AAGGGAGCAGGCAAGCCG 62.730 66.667 5.28 2.12 41.95 5.52
6157 16498 4.496336 GGAGCAGGCAAGCCGGAT 62.496 66.667 15.46 8.74 41.95 4.18
6158 16499 2.899339 GAGCAGGCAAGCCGGATC 60.899 66.667 15.46 14.32 39.23 3.36
6159 16500 4.496336 AGCAGGCAAGCCGGATCC 62.496 66.667 15.46 0.00 41.95 3.36
6161 16502 4.473520 CAGGCAAGCCGGATCCGT 62.474 66.667 31.22 12.64 41.95 4.69
6162 16503 4.473520 AGGCAAGCCGGATCCGTG 62.474 66.667 31.22 23.53 41.95 4.94
6163 16504 4.778143 GGCAAGCCGGATCCGTGT 62.778 66.667 31.22 16.11 37.81 4.49
6170 16511 1.027357 GCCGGATCCGTGTAAGAGTA 58.973 55.000 31.22 0.00 37.81 2.59
6186 16527 3.953766 AGAGTACGTCGATGTAGCATTG 58.046 45.455 17.68 0.00 0.00 2.82
6221 16562 1.681327 GCGTGACCCTCCACCTAGA 60.681 63.158 0.00 0.00 33.67 2.43
6227 16568 1.409427 GACCCTCCACCTAGAACATCG 59.591 57.143 0.00 0.00 0.00 3.84
6240 16581 1.338020 GAACATCGGGCATTGAATCCC 59.662 52.381 3.48 3.48 39.17 3.85
6242 16583 0.956633 CATCGGGCATTGAATCCCAG 59.043 55.000 11.48 0.00 42.75 4.45
6274 16615 3.812156 TTCTCTCTTTTCACCACACGA 57.188 42.857 0.00 0.00 0.00 4.35
6351 16693 8.611757 GTCACATGGCAATTTTATATTTTTCCC 58.388 33.333 0.00 0.00 0.00 3.97
6354 16696 9.752228 ACATGGCAATTTTATATTTTTCCCTTT 57.248 25.926 0.00 0.00 0.00 3.11
6389 16731 8.425577 TTTTCACAAGTCAAGTTTGTTTTTGA 57.574 26.923 10.35 5.41 36.67 2.69
6396 16738 5.807011 AGTCAAGTTTGTTTTTGAGCATGAC 59.193 36.000 0.00 0.00 34.25 3.06
6463 16805 9.832445 TGTCATTTTATTAGTAAGAGATGACCC 57.168 33.333 21.12 8.63 36.66 4.46
6475 16817 9.716556 AGTAAGAGATGACCCTTCTTATTAAGA 57.283 33.333 1.90 1.90 35.26 2.10
6476 16818 9.974980 GTAAGAGATGACCCTTCTTATTAAGAG 57.025 37.037 6.26 0.00 39.03 2.85
6477 16819 8.846423 AAGAGATGACCCTTCTTATTAAGAGA 57.154 34.615 6.26 0.00 39.03 3.10
6478 16820 9.445973 AAGAGATGACCCTTCTTATTAAGAGAT 57.554 33.333 6.26 0.00 39.03 2.75
6479 16821 8.869109 AGAGATGACCCTTCTTATTAAGAGATG 58.131 37.037 6.26 2.51 39.03 2.90
6480 16822 8.789767 AGATGACCCTTCTTATTAAGAGATGA 57.210 34.615 6.26 0.00 39.03 2.92
6481 16823 8.646900 AGATGACCCTTCTTATTAAGAGATGAC 58.353 37.037 6.26 2.08 39.03 3.06
6482 16824 7.733773 TGACCCTTCTTATTAAGAGATGACA 57.266 36.000 6.26 4.21 39.03 3.58
6483 16825 8.324191 TGACCCTTCTTATTAAGAGATGACAT 57.676 34.615 6.26 0.00 39.03 3.06
6484 16826 8.772250 TGACCCTTCTTATTAAGAGATGACATT 58.228 33.333 6.26 0.00 39.03 2.71
6485 16827 9.620259 GACCCTTCTTATTAAGAGATGACATTT 57.380 33.333 6.26 0.00 39.03 2.32
6486 16828 9.981460 ACCCTTCTTATTAAGAGATGACATTTT 57.019 29.630 6.26 0.00 39.03 1.82
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
31 32 5.008613 CACACGGCTTATTGGCAATAACTAT 59.991 40.000 24.83 10.79 41.89 2.12
119 120 5.303078 TCAATTTTACAAAACCTGCCTAGCA 59.697 36.000 0.00 0.00 36.92 3.49
333 336 5.815581 ACATCTGCATGGGACTAAAAAGTA 58.184 37.500 0.00 0.00 33.82 2.24
482 506 6.516194 CGCTCTTATATTTCTTTACGGAGGGA 60.516 42.308 0.00 0.00 34.63 4.20
483 507 5.634020 CGCTCTTATATTTCTTTACGGAGGG 59.366 44.000 0.00 0.00 0.00 4.30
484 508 6.214399 ACGCTCTTATATTTCTTTACGGAGG 58.786 40.000 0.00 0.00 0.00 4.30
511 535 9.733219 GCGTTTAGATCACTACTTTAGTAATCT 57.267 33.333 4.72 4.72 37.23 2.40
513 537 9.298774 GTGCGTTTAGATCACTACTTTAGTAAT 57.701 33.333 0.00 0.00 37.23 1.89
514 538 8.517878 AGTGCGTTTAGATCACTACTTTAGTAA 58.482 33.333 0.00 0.00 39.08 2.24
515 539 8.048534 AGTGCGTTTAGATCACTACTTTAGTA 57.951 34.615 0.00 0.00 39.08 1.82
516 540 6.921914 AGTGCGTTTAGATCACTACTTTAGT 58.078 36.000 0.00 0.00 39.08 2.24
518 542 8.298854 TGTAAGTGCGTTTAGATCACTACTTTA 58.701 33.333 0.00 0.00 39.86 1.85
519 543 7.149973 TGTAAGTGCGTTTAGATCACTACTTT 58.850 34.615 0.00 0.00 39.86 2.66
520 544 6.684686 TGTAAGTGCGTTTAGATCACTACTT 58.315 36.000 0.00 0.00 39.86 2.24
521 545 6.263516 TGTAAGTGCGTTTAGATCACTACT 57.736 37.500 0.00 0.00 39.86 2.57
522 546 7.521509 AATGTAAGTGCGTTTAGATCACTAC 57.478 36.000 0.00 0.00 39.86 2.73
523 547 7.601130 ACAAATGTAAGTGCGTTTAGATCACTA 59.399 33.333 0.00 0.00 39.86 2.74
524 548 6.426937 ACAAATGTAAGTGCGTTTAGATCACT 59.573 34.615 0.00 0.00 42.28 3.41
525 549 6.599437 ACAAATGTAAGTGCGTTTAGATCAC 58.401 36.000 0.00 0.00 0.00 3.06
526 550 6.795098 ACAAATGTAAGTGCGTTTAGATCA 57.205 33.333 0.00 0.00 0.00 2.92
527 551 9.047871 GTAAACAAATGTAAGTGCGTTTAGATC 57.952 33.333 0.00 0.00 31.53 2.75
528 552 8.561212 TGTAAACAAATGTAAGTGCGTTTAGAT 58.439 29.630 0.00 0.00 31.53 1.98
529 553 7.917597 TGTAAACAAATGTAAGTGCGTTTAGA 58.082 30.769 0.00 0.00 31.53 2.10
530 554 8.065407 TCTGTAAACAAATGTAAGTGCGTTTAG 58.935 33.333 0.00 0.00 31.53 1.85
532 556 6.787225 TCTGTAAACAAATGTAAGTGCGTTT 58.213 32.000 0.00 0.00 0.00 3.60
533 557 6.366315 TCTGTAAACAAATGTAAGTGCGTT 57.634 33.333 0.00 0.00 0.00 4.84
534 558 5.049680 CCTCTGTAAACAAATGTAAGTGCGT 60.050 40.000 0.00 0.00 0.00 5.24
535 559 5.382303 CCTCTGTAAACAAATGTAAGTGCG 58.618 41.667 0.00 0.00 0.00 5.34
536 560 5.472137 TCCCTCTGTAAACAAATGTAAGTGC 59.528 40.000 0.00 0.00 0.00 4.40
538 562 6.838382 ACTCCCTCTGTAAACAAATGTAAGT 58.162 36.000 0.00 0.00 0.00 2.24
539 563 8.095169 AGTACTCCCTCTGTAAACAAATGTAAG 58.905 37.037 0.00 0.00 0.00 2.34
542 566 6.435292 AGTACTCCCTCTGTAAACAAATGT 57.565 37.500 0.00 0.00 0.00 2.71
543 567 8.842358 TTTAGTACTCCCTCTGTAAACAAATG 57.158 34.615 0.00 0.00 0.00 2.32
546 570 7.508296 AGTCTTTAGTACTCCCTCTGTAAACAA 59.492 37.037 0.00 0.00 0.00 2.83
547 571 7.008941 AGTCTTTAGTACTCCCTCTGTAAACA 58.991 38.462 0.00 0.00 0.00 2.83
548 572 7.314393 CAGTCTTTAGTACTCCCTCTGTAAAC 58.686 42.308 0.00 0.00 0.00 2.01
549 573 6.436532 CCAGTCTTTAGTACTCCCTCTGTAAA 59.563 42.308 0.00 0.00 0.00 2.01
550 574 5.950549 CCAGTCTTTAGTACTCCCTCTGTAA 59.049 44.000 0.00 0.00 0.00 2.41
551 575 5.252397 TCCAGTCTTTAGTACTCCCTCTGTA 59.748 44.000 0.00 0.00 0.00 2.74
553 577 4.399934 GTCCAGTCTTTAGTACTCCCTCTG 59.600 50.000 0.00 3.57 0.00 3.35
554 578 4.602107 GTCCAGTCTTTAGTACTCCCTCT 58.398 47.826 0.00 0.00 0.00 3.69
556 580 3.009916 TCGTCCAGTCTTTAGTACTCCCT 59.990 47.826 0.00 0.00 0.00 4.20
557 581 3.350833 TCGTCCAGTCTTTAGTACTCCC 58.649 50.000 0.00 0.00 0.00 4.30
558 582 4.671250 CGTTCGTCCAGTCTTTAGTACTCC 60.671 50.000 0.00 0.00 0.00 3.85
559 583 4.401714 CGTTCGTCCAGTCTTTAGTACTC 58.598 47.826 0.00 0.00 0.00 2.59
560 584 3.190118 CCGTTCGTCCAGTCTTTAGTACT 59.810 47.826 0.00 0.00 0.00 2.73
561 585 3.496155 CCGTTCGTCCAGTCTTTAGTAC 58.504 50.000 0.00 0.00 0.00 2.73
562 586 2.489329 CCCGTTCGTCCAGTCTTTAGTA 59.511 50.000 0.00 0.00 0.00 1.82
563 587 1.271656 CCCGTTCGTCCAGTCTTTAGT 59.728 52.381 0.00 0.00 0.00 2.24
564 588 1.992170 CCCGTTCGTCCAGTCTTTAG 58.008 55.000 0.00 0.00 0.00 1.85
580 604 2.711542 AGTTTTCTCCTTGTATGCCCG 58.288 47.619 0.00 0.00 0.00 6.13
606 630 1.449778 GGGCGGCTAGTCTCAAACC 60.450 63.158 9.56 0.00 0.00 3.27
628 652 2.986534 ATGCCCATTCTCCCATTAGG 57.013 50.000 0.00 0.00 0.00 2.69
671 695 0.822164 GTTTAGGGCGGCTAGTCTCA 59.178 55.000 9.56 0.00 0.00 3.27
694 718 0.543277 ATTGCTCGCTTCATCTCCCA 59.457 50.000 0.00 0.00 0.00 4.37
870 894 7.309255 CGCCTATGTATAGTAAGGAGATGTTGT 60.309 40.741 0.00 0.00 31.26 3.32
873 897 6.374894 GTCGCCTATGTATAGTAAGGAGATGT 59.625 42.308 0.00 0.00 39.61 3.06
906 930 3.545703 AGGTATGGCTACTGTTGATTGC 58.454 45.455 0.00 0.00 0.00 3.56
969 993 1.827344 CACTACCACCAGCAGATGAGA 59.173 52.381 0.00 0.00 0.00 3.27
970 994 1.741732 GCACTACCACCAGCAGATGAG 60.742 57.143 0.00 0.00 0.00 2.90
971 995 0.250234 GCACTACCACCAGCAGATGA 59.750 55.000 0.00 0.00 0.00 2.92
972 996 0.251354 AGCACTACCACCAGCAGATG 59.749 55.000 0.00 0.00 0.00 2.90
973 997 0.251354 CAGCACTACCACCAGCAGAT 59.749 55.000 0.00 0.00 0.00 2.90
1235 2249 4.455190 AGCAGCAACAACAACAACAAAAAT 59.545 33.333 0.00 0.00 0.00 1.82
1236 2250 3.812053 AGCAGCAACAACAACAACAAAAA 59.188 34.783 0.00 0.00 0.00 1.94
1237 2251 3.186001 CAGCAGCAACAACAACAACAAAA 59.814 39.130 0.00 0.00 0.00 2.44
1241 2256 0.646895 GCAGCAGCAACAACAACAAC 59.353 50.000 0.00 0.00 41.58 3.32
1254 2269 0.461693 GACCTCCTAAGCAGCAGCAG 60.462 60.000 3.17 0.00 45.49 4.24
1256 2271 0.179936 ATGACCTCCTAAGCAGCAGC 59.820 55.000 0.00 0.00 42.56 5.25
1257 2272 2.697751 AGTATGACCTCCTAAGCAGCAG 59.302 50.000 0.00 0.00 0.00 4.24
1388 2412 3.146726 TAGGTACATCTGCCGCGCC 62.147 63.158 0.00 0.00 0.00 6.53
1389 2413 1.949631 GTAGGTACATCTGCCGCGC 60.950 63.158 0.00 0.00 0.00 6.86
1390 2414 0.870307 GTGTAGGTACATCTGCCGCG 60.870 60.000 0.00 0.00 38.63 6.46
1391 2415 0.174845 TGTGTAGGTACATCTGCCGC 59.825 55.000 0.00 0.00 38.63 6.53
1400 2424 3.813166 ACACTGCAACAATGTGTAGGTAC 59.187 43.478 6.87 0.00 42.26 3.34
1428 2452 3.127895 GGTCAACAGTGCAACAACAACTA 59.872 43.478 0.00 0.00 41.43 2.24
1429 2453 2.094752 GGTCAACAGTGCAACAACAACT 60.095 45.455 0.00 0.00 41.43 3.16
1517 2556 2.624838 ACCTCTGCATTGTTTTGTCCTG 59.375 45.455 0.00 0.00 0.00 3.86
1522 2561 5.916883 CAGTTTCTACCTCTGCATTGTTTTG 59.083 40.000 0.00 0.00 0.00 2.44
1628 2674 4.101585 TGAACAGAGGCTTGTCTATATGGG 59.898 45.833 0.00 0.00 0.00 4.00
1636 2682 4.184629 ACGATAATGAACAGAGGCTTGTC 58.815 43.478 0.00 0.00 0.00 3.18
1824 2898 7.451877 TCACTCCCACTATAATAAAGGAGCTAG 59.548 40.741 3.81 0.00 43.87 3.42
1827 2901 6.224584 GTCACTCCCACTATAATAAAGGAGC 58.775 44.000 3.81 0.00 43.87 4.70
1841 2918 1.660560 GCATGCATGGTCACTCCCAC 61.661 60.000 27.34 3.43 37.31 4.61
1852 2929 3.234386 CAAGATGATTAGCGCATGCATG 58.766 45.455 22.70 22.70 46.23 4.06
1854 2931 2.288729 GACAAGATGATTAGCGCATGCA 59.711 45.455 19.57 1.90 46.23 3.96
1855 2932 2.288729 TGACAAGATGATTAGCGCATGC 59.711 45.455 11.47 7.91 43.24 4.06
1875 2973 1.464608 CCGCCTAACACACACAGATTG 59.535 52.381 0.00 0.00 0.00 2.67
1876 2974 1.610624 CCCGCCTAACACACACAGATT 60.611 52.381 0.00 0.00 0.00 2.40
1881 2979 2.281208 TGCCCGCCTAACACACAC 60.281 61.111 0.00 0.00 0.00 3.82
1962 3061 1.506718 CCTCGACTCGCAACTGCTA 59.493 57.895 0.00 0.00 39.32 3.49
2172 3272 0.465460 GTCCCAGTTGCAAGTCCACA 60.465 55.000 3.08 0.00 0.00 4.17
2218 5203 1.066573 AGTTGCAATCTCACCCTCGAG 60.067 52.381 5.13 5.13 0.00 4.04
2262 5247 2.805353 CCACCGTCGACTCGCAAG 60.805 66.667 14.70 0.00 0.00 4.01
2313 5298 1.732417 CTAGCCTCGACCCGTAACCC 61.732 65.000 0.00 0.00 0.00 4.11
2314 5299 1.034292 ACTAGCCTCGACCCGTAACC 61.034 60.000 0.00 0.00 0.00 2.85
2368 5353 1.463674 AGCCCATCATCGACCAAAAC 58.536 50.000 0.00 0.00 0.00 2.43
2399 5384 1.271926 ACCTGCCCTATTGGTGTTGTC 60.272 52.381 0.00 0.00 36.04 3.18
2437 5422 2.957491 TTTTGTCCCAGTTGCAAGTG 57.043 45.000 24.65 24.65 0.00 3.16
2469 5455 4.528206 CCATCATAGTCATACTACTGCCCA 59.472 45.833 0.00 0.00 32.84 5.36
2658 5644 7.889469 AGTATGTTTTTCATCTCAGTTGCAAT 58.111 30.769 0.59 0.00 37.91 3.56
2753 6179 1.529010 CTGAGTTGCAAGCCACCCA 60.529 57.895 0.00 0.00 0.00 4.51
2881 7708 5.163099 TGACTTGCAACTAGGCCCATATAAT 60.163 40.000 0.00 0.00 0.00 1.28
2891 7718 2.154462 CACCCTTGACTTGCAACTAGG 58.846 52.381 9.61 9.61 31.96 3.02
2893 7720 1.771854 TCCACCCTTGACTTGCAACTA 59.228 47.619 0.00 0.00 31.96 2.24
2989 7826 2.389059 CAAGTCCATCATCGACTAGCG 58.611 52.381 0.00 0.00 39.69 4.26
3025 7862 2.948979 CACAACTGGGCTTGTAGTTTCA 59.051 45.455 0.00 0.00 35.08 2.69
3104 7942 1.065491 ACAGTTGCAAGTCCACACTCA 60.065 47.619 3.08 0.00 29.93 3.41
3124 7962 7.776969 ACTAGGTCGGTAGTATGTTTCTTATCA 59.223 37.037 0.00 0.00 31.14 2.15
3130 7968 5.803967 CACAACTAGGTCGGTAGTATGTTTC 59.196 44.000 0.00 0.00 32.69 2.78
3159 7997 0.825010 CCAGTTGCAAGCTCACCCTT 60.825 55.000 0.00 0.00 0.00 3.95
3195 8033 2.651361 CCCTCGACTCGCAACTGT 59.349 61.111 0.00 0.00 0.00 3.55
3464 8303 5.849604 GCTCGTAATTTTGTAGTTGTTCCAC 59.150 40.000 0.00 0.00 0.00 4.02
3493 8332 3.775202 CAAGTCGACCCTTGACTATCAG 58.225 50.000 13.01 0.00 45.62 2.90
3552 8391 0.247185 GGTTGCATGTCCACCATTGG 59.753 55.000 0.00 0.00 45.56 3.16
3564 8403 3.555967 TTTTTGCCCCGGTTGCAT 58.444 50.000 15.71 0.00 38.76 3.96
3618 8462 5.005971 CGAGTCTTACTTTTTCCGTGTCAAA 59.994 40.000 0.00 0.00 0.00 2.69
3635 8479 3.018149 CCTCAACTAGCTACCGAGTCTT 58.982 50.000 0.00 0.00 0.00 3.01
3648 8492 4.973168 AGTTGCAAGTTCATCCTCAACTA 58.027 39.130 0.00 0.00 41.31 2.24
3650 8494 5.689383 TTAGTTGCAAGTTCATCCTCAAC 57.311 39.130 12.95 0.00 35.39 3.18
3729 8578 2.233922 CAGTTGTAAGTCCACCCTCGAT 59.766 50.000 0.00 0.00 0.00 3.59
3779 8630 2.028476 TGTCCCAGTTGTAAGTCCATCG 60.028 50.000 0.00 0.00 0.00 3.84
3818 8669 0.242825 CGACCCTTGACTCGCAACTA 59.757 55.000 0.00 0.00 31.96 2.24
3840 8691 4.853924 AAGTGTTTTATCCCAGTTGCAG 57.146 40.909 0.00 0.00 0.00 4.41
3873 11866 8.971321 TGTCTTTAACACGACTATAACTTTGTC 58.029 33.333 0.00 0.00 31.20 3.18
4017 12010 7.602644 ACATGTAATTACAGTGTCGTCTTCATT 59.397 33.333 22.03 0.00 39.92 2.57
4154 12162 4.520492 GGTTTTGAGAGAAGCTTCCAATCA 59.480 41.667 22.81 19.61 0.00 2.57
4401 12478 1.740297 AAAAGTACGTGCACACACCA 58.260 45.000 18.64 0.00 44.40 4.17
4436 12515 2.232941 CCTCTTGTCGCTAGGTTGGTTA 59.767 50.000 0.00 0.00 0.00 2.85
4820 14210 4.331992 TCAGCTCTACAGTACGTACATCAC 59.668 45.833 26.55 9.66 0.00 3.06
4822 14212 4.571580 AGTCAGCTCTACAGTACGTACATC 59.428 45.833 26.55 0.70 0.00 3.06
4823 14213 4.515361 AGTCAGCTCTACAGTACGTACAT 58.485 43.478 26.55 16.59 0.00 2.29
5003 14393 1.562575 GGTTCCAGTACGCGTGGTTG 61.563 60.000 24.59 16.45 36.37 3.77
5625 15955 1.140312 GGCCTCAGGGATATTGGTCA 58.860 55.000 0.00 0.00 33.58 4.02
5653 15993 1.587933 GACGGGAGAGAGCGTGTTCT 61.588 60.000 0.00 0.00 0.00 3.01
5728 16069 5.503520 GCTTTGGTGTGTTATATAGCGAACC 60.504 44.000 11.39 11.39 0.00 3.62
5778 16119 0.767375 AGCATTCTGGTGTGGTCACT 59.233 50.000 2.66 0.00 43.41 3.41
5779 16120 2.076863 GTAGCATTCTGGTGTGGTCAC 58.923 52.381 0.00 0.00 43.19 3.67
5780 16121 1.696884 TGTAGCATTCTGGTGTGGTCA 59.303 47.619 0.00 0.00 0.00 4.02
5781 16122 2.472695 TGTAGCATTCTGGTGTGGTC 57.527 50.000 0.00 0.00 0.00 4.02
5782 16123 2.677902 CGATGTAGCATTCTGGTGTGGT 60.678 50.000 0.00 0.00 0.00 4.16
5783 16124 1.935873 CGATGTAGCATTCTGGTGTGG 59.064 52.381 0.00 0.00 0.00 4.17
5787 16128 1.202417 CGGTCGATGTAGCATTCTGGT 60.202 52.381 0.00 0.00 0.00 4.00
5788 16129 1.491670 CGGTCGATGTAGCATTCTGG 58.508 55.000 0.00 0.00 0.00 3.86
5789 16130 1.491670 CCGGTCGATGTAGCATTCTG 58.508 55.000 0.00 0.00 0.00 3.02
5791 16132 0.529773 TGCCGGTCGATGTAGCATTC 60.530 55.000 1.90 0.00 0.00 2.67
5801 16142 0.032952 GCCTGTAATATGCCGGTCGA 59.967 55.000 1.90 0.00 0.00 4.20
5817 16158 0.332972 GAAGGGTCCTTTGATGGCCT 59.667 55.000 3.32 0.00 36.26 5.19
5831 16172 4.314961 GGCTGTTTAATTGTTTGGAAGGG 58.685 43.478 0.00 0.00 0.00 3.95
5833 16174 4.314961 GGGGCTGTTTAATTGTTTGGAAG 58.685 43.478 0.00 0.00 0.00 3.46
5836 16177 3.052455 GGGGGCTGTTTAATTGTTTGG 57.948 47.619 0.00 0.00 0.00 3.28
5861 16202 2.492567 CCCCACCCTCCTGAAAAATCAA 60.493 50.000 0.00 0.00 0.00 2.57
5862 16203 1.077005 CCCCACCCTCCTGAAAAATCA 59.923 52.381 0.00 0.00 0.00 2.57
5863 16204 1.852633 CCCCACCCTCCTGAAAAATC 58.147 55.000 0.00 0.00 0.00 2.17
5864 16205 0.252239 GCCCCACCCTCCTGAAAAAT 60.252 55.000 0.00 0.00 0.00 1.82
5865 16206 1.155155 GCCCCACCCTCCTGAAAAA 59.845 57.895 0.00 0.00 0.00 1.94
5866 16207 2.851045 GCCCCACCCTCCTGAAAA 59.149 61.111 0.00 0.00 0.00 2.29
5867 16208 3.264845 GGCCCCACCCTCCTGAAA 61.265 66.667 0.00 0.00 0.00 2.69
5868 16209 3.829311 AAGGCCCCACCCTCCTGAA 62.829 63.158 0.00 0.00 40.58 3.02
5869 16210 4.285790 AAGGCCCCACCCTCCTGA 62.286 66.667 0.00 0.00 40.58 3.86
5870 16211 3.732849 GAAGGCCCCACCCTCCTG 61.733 72.222 0.00 0.00 40.58 3.86
5881 16222 1.584717 ATCAAGGGGAAGGGAAGGCC 61.585 60.000 0.00 0.00 0.00 5.19
5882 16223 0.106469 GATCAAGGGGAAGGGAAGGC 60.106 60.000 0.00 0.00 0.00 4.35
5883 16224 0.553333 GGATCAAGGGGAAGGGAAGG 59.447 60.000 0.00 0.00 0.00 3.46
5884 16225 1.298953 TGGATCAAGGGGAAGGGAAG 58.701 55.000 0.00 0.00 0.00 3.46
5885 16226 1.766951 TTGGATCAAGGGGAAGGGAA 58.233 50.000 0.00 0.00 0.00 3.97
5886 16227 1.852965 GATTGGATCAAGGGGAAGGGA 59.147 52.381 0.00 0.00 0.00 4.20
5887 16228 1.570501 TGATTGGATCAAGGGGAAGGG 59.429 52.381 0.00 0.00 36.11 3.95
5888 16229 3.386932 TTGATTGGATCAAGGGGAAGG 57.613 47.619 0.00 0.00 43.84 3.46
5945 16286 1.183549 GGCAAGTCTCGTCCCTCTTA 58.816 55.000 0.00 0.00 0.00 2.10
5946 16287 0.543174 AGGCAAGTCTCGTCCCTCTT 60.543 55.000 0.00 0.00 0.00 2.85
5947 16288 1.077625 AGGCAAGTCTCGTCCCTCT 59.922 57.895 0.00 0.00 0.00 3.69
5948 16289 1.216710 CAGGCAAGTCTCGTCCCTC 59.783 63.158 0.00 0.00 0.00 4.30
5949 16290 1.122019 AACAGGCAAGTCTCGTCCCT 61.122 55.000 0.00 0.00 0.00 4.20
5950 16291 0.670854 GAACAGGCAAGTCTCGTCCC 60.671 60.000 0.00 0.00 0.00 4.46
5951 16292 0.670854 GGAACAGGCAAGTCTCGTCC 60.671 60.000 0.00 0.00 0.00 4.79
5952 16293 0.670854 GGGAACAGGCAAGTCTCGTC 60.671 60.000 0.00 0.00 0.00 4.20
5953 16294 1.122019 AGGGAACAGGCAAGTCTCGT 61.122 55.000 0.00 0.00 0.00 4.18
5954 16295 0.390472 GAGGGAACAGGCAAGTCTCG 60.390 60.000 0.00 0.00 0.00 4.04
5955 16296 0.035915 GGAGGGAACAGGCAAGTCTC 60.036 60.000 0.00 0.00 0.00 3.36
5956 16297 1.831652 CGGAGGGAACAGGCAAGTCT 61.832 60.000 0.00 0.00 0.00 3.24
5957 16298 1.376037 CGGAGGGAACAGGCAAGTC 60.376 63.158 0.00 0.00 0.00 3.01
5958 16299 2.750350 CGGAGGGAACAGGCAAGT 59.250 61.111 0.00 0.00 0.00 3.16
5959 16300 2.747855 GCGGAGGGAACAGGCAAG 60.748 66.667 0.00 0.00 0.00 4.01
5960 16301 4.344865 GGCGGAGGGAACAGGCAA 62.345 66.667 0.00 0.00 0.00 4.52
5962 16303 4.785453 CAGGCGGAGGGAACAGGC 62.785 72.222 0.00 0.00 0.00 4.85
5963 16304 4.785453 GCAGGCGGAGGGAACAGG 62.785 72.222 0.00 0.00 0.00 4.00
5966 16307 4.699522 AACGCAGGCGGAGGGAAC 62.700 66.667 18.63 0.00 44.69 3.62
5967 16308 4.388499 GAACGCAGGCGGAGGGAA 62.388 66.667 18.63 0.00 44.69 3.97
5969 16310 4.473520 ATGAACGCAGGCGGAGGG 62.474 66.667 18.63 0.00 44.69 4.30
5970 16311 2.892425 GATGAACGCAGGCGGAGG 60.892 66.667 18.63 0.00 44.69 4.30
5971 16312 2.169789 CAGATGAACGCAGGCGGAG 61.170 63.158 18.63 0.00 44.69 4.63
5972 16313 2.125552 CAGATGAACGCAGGCGGA 60.126 61.111 18.63 1.70 44.69 5.54
5973 16314 2.434884 ACAGATGAACGCAGGCGG 60.435 61.111 18.63 0.49 44.69 6.13
5974 16315 2.780643 CACAGATGAACGCAGGCG 59.219 61.111 12.71 12.71 46.03 5.52
5975 16316 1.975363 GAGCACAGATGAACGCAGGC 61.975 60.000 0.00 0.00 0.00 4.85
5976 16317 1.364626 GGAGCACAGATGAACGCAGG 61.365 60.000 0.00 0.00 0.00 4.85
5977 16318 1.364626 GGGAGCACAGATGAACGCAG 61.365 60.000 0.00 0.00 0.00 5.18
5978 16319 1.375908 GGGAGCACAGATGAACGCA 60.376 57.895 0.00 0.00 0.00 5.24
5979 16320 2.456119 CGGGAGCACAGATGAACGC 61.456 63.158 0.00 0.00 0.00 4.84
5980 16321 3.786101 CGGGAGCACAGATGAACG 58.214 61.111 0.00 0.00 0.00 3.95
5994 16335 1.581934 AATCATGTCACGTATGCGGG 58.418 50.000 8.39 2.85 44.11 6.13
5995 16336 2.607180 TCAAATCATGTCACGTATGCGG 59.393 45.455 8.39 0.00 43.45 5.69
5996 16337 3.923827 TCAAATCATGTCACGTATGCG 57.076 42.857 0.19 0.19 44.93 4.73
5997 16338 5.809464 TCAATCAAATCATGTCACGTATGC 58.191 37.500 0.00 0.00 0.00 3.14
5998 16339 8.845942 ATTTCAATCAAATCATGTCACGTATG 57.154 30.769 0.00 0.00 27.18 2.39
6001 16342 9.689976 TTTTATTTCAATCAAATCATGTCACGT 57.310 25.926 0.00 0.00 36.09 4.49
6011 16352 9.617523 CCAGGCCTTATTTTATTTCAATCAAAT 57.382 29.630 0.00 0.00 38.35 2.32
6012 16353 7.552330 GCCAGGCCTTATTTTATTTCAATCAAA 59.448 33.333 0.00 0.00 0.00 2.69
6013 16354 7.047271 GCCAGGCCTTATTTTATTTCAATCAA 58.953 34.615 0.00 0.00 0.00 2.57
6014 16355 6.407979 GGCCAGGCCTTATTTTATTTCAATCA 60.408 38.462 24.99 0.00 46.69 2.57
6015 16356 5.991606 GGCCAGGCCTTATTTTATTTCAATC 59.008 40.000 24.99 0.00 46.69 2.67
6016 16357 5.928976 GGCCAGGCCTTATTTTATTTCAAT 58.071 37.500 24.99 0.00 46.69 2.57
6017 16358 5.351948 GGCCAGGCCTTATTTTATTTCAA 57.648 39.130 24.99 0.00 46.69 2.69
6033 16374 1.506028 TTTAAGGGGGTGAGGCCAGG 61.506 60.000 5.01 0.00 39.65 4.45
6034 16375 0.407918 TTTTAAGGGGGTGAGGCCAG 59.592 55.000 5.01 0.00 39.65 4.85
6035 16376 1.006639 GATTTTAAGGGGGTGAGGCCA 59.993 52.381 5.01 0.00 39.65 5.36
6036 16377 1.006639 TGATTTTAAGGGGGTGAGGCC 59.993 52.381 0.00 0.00 0.00 5.19
6037 16378 2.379005 CTGATTTTAAGGGGGTGAGGC 58.621 52.381 0.00 0.00 0.00 4.70
6038 16379 3.018423 CCTGATTTTAAGGGGGTGAGG 57.982 52.381 0.00 0.00 0.00 3.86
6046 16387 8.660435 TCTAATCATCTACCCCTGATTTTAAGG 58.340 37.037 3.40 0.00 41.22 2.69
6051 16392 9.621239 TCTAATCTAATCATCTACCCCTGATTT 57.379 33.333 3.40 0.00 41.22 2.17
6052 16393 9.621239 TTCTAATCTAATCATCTACCCCTGATT 57.379 33.333 3.57 3.57 42.92 2.57
6053 16394 9.621239 TTTCTAATCTAATCATCTACCCCTGAT 57.379 33.333 0.00 0.00 33.59 2.90
6054 16395 9.094578 CTTTCTAATCTAATCATCTACCCCTGA 57.905 37.037 0.00 0.00 0.00 3.86
6055 16396 9.094578 TCTTTCTAATCTAATCATCTACCCCTG 57.905 37.037 0.00 0.00 0.00 4.45
6056 16397 9.676129 TTCTTTCTAATCTAATCATCTACCCCT 57.324 33.333 0.00 0.00 0.00 4.79
6090 16431 7.042335 CCACTTCATCCTACGACTATCTTTTT 58.958 38.462 0.00 0.00 0.00 1.94
6091 16432 6.380274 TCCACTTCATCCTACGACTATCTTTT 59.620 38.462 0.00 0.00 0.00 2.27
6092 16433 5.892119 TCCACTTCATCCTACGACTATCTTT 59.108 40.000 0.00 0.00 0.00 2.52
6093 16434 5.446860 TCCACTTCATCCTACGACTATCTT 58.553 41.667 0.00 0.00 0.00 2.40
6094 16435 5.050126 TCCACTTCATCCTACGACTATCT 57.950 43.478 0.00 0.00 0.00 1.98
6095 16436 5.769484 TTCCACTTCATCCTACGACTATC 57.231 43.478 0.00 0.00 0.00 2.08
6096 16437 5.421056 TGTTTCCACTTCATCCTACGACTAT 59.579 40.000 0.00 0.00 0.00 2.12
6097 16438 4.768448 TGTTTCCACTTCATCCTACGACTA 59.232 41.667 0.00 0.00 0.00 2.59
6098 16439 3.576982 TGTTTCCACTTCATCCTACGACT 59.423 43.478 0.00 0.00 0.00 4.18
6099 16440 3.678548 GTGTTTCCACTTCATCCTACGAC 59.321 47.826 0.00 0.00 38.61 4.34
6100 16441 3.613193 CGTGTTTCCACTTCATCCTACGA 60.613 47.826 0.00 0.00 39.55 3.43
6101 16442 2.666508 CGTGTTTCCACTTCATCCTACG 59.333 50.000 0.00 0.00 39.55 3.51
6102 16443 3.000727 CCGTGTTTCCACTTCATCCTAC 58.999 50.000 0.00 0.00 39.55 3.18
6103 16444 2.901192 TCCGTGTTTCCACTTCATCCTA 59.099 45.455 0.00 0.00 39.55 2.94
6104 16445 1.697432 TCCGTGTTTCCACTTCATCCT 59.303 47.619 0.00 0.00 39.55 3.24
6105 16446 2.178912 TCCGTGTTTCCACTTCATCC 57.821 50.000 0.00 0.00 39.55 3.51
6106 16447 2.420022 CCATCCGTGTTTCCACTTCATC 59.580 50.000 0.00 0.00 39.55 2.92
6107 16448 2.436417 CCATCCGTGTTTCCACTTCAT 58.564 47.619 0.00 0.00 39.55 2.57
6108 16449 1.544537 CCCATCCGTGTTTCCACTTCA 60.545 52.381 0.00 0.00 39.55 3.02
6109 16450 1.165270 CCCATCCGTGTTTCCACTTC 58.835 55.000 0.00 0.00 39.55 3.01
6110 16451 0.768622 TCCCATCCGTGTTTCCACTT 59.231 50.000 0.00 0.00 39.55 3.16
6111 16452 0.324943 CTCCCATCCGTGTTTCCACT 59.675 55.000 0.00 0.00 39.55 4.00
6112 16453 1.305930 GCTCCCATCCGTGTTTCCAC 61.306 60.000 0.00 0.00 38.27 4.02
6113 16454 1.002624 GCTCCCATCCGTGTTTCCA 60.003 57.895 0.00 0.00 0.00 3.53
6114 16455 1.002624 TGCTCCCATCCGTGTTTCC 60.003 57.895 0.00 0.00 0.00 3.13
6115 16456 1.635663 CGTGCTCCCATCCGTGTTTC 61.636 60.000 0.00 0.00 0.00 2.78
6116 16457 1.671054 CGTGCTCCCATCCGTGTTT 60.671 57.895 0.00 0.00 0.00 2.83
6117 16458 2.047274 CGTGCTCCCATCCGTGTT 60.047 61.111 0.00 0.00 0.00 3.32
6118 16459 4.082523 CCGTGCTCCCATCCGTGT 62.083 66.667 0.00 0.00 0.00 4.49
6119 16460 4.838152 CCCGTGCTCCCATCCGTG 62.838 72.222 0.00 0.00 0.00 4.94
6121 16462 3.740128 CTTCCCGTGCTCCCATCCG 62.740 68.421 0.00 0.00 0.00 4.18
6122 16463 2.190578 CTTCCCGTGCTCCCATCC 59.809 66.667 0.00 0.00 0.00 3.51
6123 16464 2.190578 CCTTCCCGTGCTCCCATC 59.809 66.667 0.00 0.00 0.00 3.51
6124 16465 3.411517 CCCTTCCCGTGCTCCCAT 61.412 66.667 0.00 0.00 0.00 4.00
6125 16466 4.649705 TCCCTTCCCGTGCTCCCA 62.650 66.667 0.00 0.00 0.00 4.37
6126 16467 3.787001 CTCCCTTCCCGTGCTCCC 61.787 72.222 0.00 0.00 0.00 4.30
6127 16468 4.475135 GCTCCCTTCCCGTGCTCC 62.475 72.222 0.00 0.00 0.00 4.70
6128 16469 3.672295 CTGCTCCCTTCCCGTGCTC 62.672 68.421 0.00 0.00 0.00 4.26
6129 16470 3.710722 CTGCTCCCTTCCCGTGCT 61.711 66.667 0.00 0.00 0.00 4.40
6130 16471 4.785453 CCTGCTCCCTTCCCGTGC 62.785 72.222 0.00 0.00 0.00 5.34
6131 16472 4.785453 GCCTGCTCCCTTCCCGTG 62.785 72.222 0.00 0.00 0.00 4.94
6133 16474 3.984193 CTTGCCTGCTCCCTTCCCG 62.984 68.421 0.00 0.00 0.00 5.14
6134 16475 2.044551 CTTGCCTGCTCCCTTCCC 60.045 66.667 0.00 0.00 0.00 3.97
6135 16476 2.753446 GCTTGCCTGCTCCCTTCC 60.753 66.667 0.00 0.00 0.00 3.46
6136 16477 2.753446 GGCTTGCCTGCTCCCTTC 60.753 66.667 4.11 0.00 0.00 3.46
6137 16478 4.729918 CGGCTTGCCTGCTCCCTT 62.730 66.667 10.12 0.00 0.00 3.95
6140 16481 4.496336 ATCCGGCTTGCCTGCTCC 62.496 66.667 10.12 0.00 0.00 4.70
6141 16482 2.899339 GATCCGGCTTGCCTGCTC 60.899 66.667 10.12 0.76 0.00 4.26
6142 16483 4.496336 GGATCCGGCTTGCCTGCT 62.496 66.667 10.12 0.00 0.00 4.24
6144 16485 4.473520 ACGGATCCGGCTTGCCTG 62.474 66.667 35.87 7.52 44.69 4.85
6145 16486 4.473520 CACGGATCCGGCTTGCCT 62.474 66.667 35.87 12.31 44.69 4.75
6146 16487 2.862674 TTACACGGATCCGGCTTGCC 62.863 60.000 35.87 0.75 44.69 4.52
6147 16488 1.429148 CTTACACGGATCCGGCTTGC 61.429 60.000 35.87 0.00 44.69 4.01
6148 16489 0.174845 TCTTACACGGATCCGGCTTG 59.825 55.000 35.87 26.80 44.69 4.01
6149 16490 0.460311 CTCTTACACGGATCCGGCTT 59.540 55.000 35.87 21.88 44.69 4.35
6150 16491 0.683504 ACTCTTACACGGATCCGGCT 60.684 55.000 35.87 22.70 44.69 5.52
6151 16492 1.027357 TACTCTTACACGGATCCGGC 58.973 55.000 35.87 0.00 44.69 6.13
6152 16493 1.003116 CGTACTCTTACACGGATCCGG 60.003 57.143 35.87 26.10 44.69 5.14
6153 16494 1.667724 ACGTACTCTTACACGGATCCG 59.332 52.381 32.20 32.20 42.35 4.18
6154 16495 2.286067 CGACGTACTCTTACACGGATCC 60.286 54.545 0.00 0.00 42.35 3.36
6155 16496 2.604914 TCGACGTACTCTTACACGGATC 59.395 50.000 0.00 0.00 42.35 3.36
6156 16497 2.621338 TCGACGTACTCTTACACGGAT 58.379 47.619 0.00 0.00 42.35 4.18
6157 16498 2.078849 TCGACGTACTCTTACACGGA 57.921 50.000 0.00 0.00 42.35 4.69
6158 16499 2.094894 ACATCGACGTACTCTTACACGG 59.905 50.000 0.00 0.00 42.35 4.94
6159 16500 3.380486 ACATCGACGTACTCTTACACG 57.620 47.619 0.00 0.00 43.63 4.49
6160 16501 4.201753 TGCTACATCGACGTACTCTTACAC 60.202 45.833 0.00 0.00 0.00 2.90
6161 16502 3.934579 TGCTACATCGACGTACTCTTACA 59.065 43.478 0.00 0.00 0.00 2.41
6162 16503 4.526970 TGCTACATCGACGTACTCTTAC 57.473 45.455 0.00 0.00 0.00 2.34
6163 16504 5.507974 CAATGCTACATCGACGTACTCTTA 58.492 41.667 0.00 0.00 0.00 2.10
6170 16511 1.280982 CAGCAATGCTACATCGACGT 58.719 50.000 7.70 0.00 36.40 4.34
6186 16527 2.670934 CTGAGTGTGGTGGCCAGC 60.671 66.667 28.15 28.15 32.34 4.85
6221 16562 1.402787 GGGATTCAATGCCCGATGTT 58.597 50.000 0.00 0.00 34.21 2.71
6227 16568 0.033208 TGGACTGGGATTCAATGCCC 60.033 55.000 5.31 1.85 44.93 5.36
6260 16601 5.804979 AGAAAAATTGTCGTGTGGTGAAAAG 59.195 36.000 0.00 0.00 0.00 2.27
6267 16608 7.979115 TTTTTCTAGAAAAATTGTCGTGTGG 57.021 32.000 30.56 0.00 43.08 4.17
6364 16706 8.425577 TCAAAAACAAACTTGACTTGTGAAAA 57.574 26.923 0.00 0.00 37.10 2.29
6451 16793 9.937876 TCTCTTAATAAGAAGGGTCATCTCTTA 57.062 33.333 4.13 0.00 37.02 2.10
6452 16794 8.846423 TCTCTTAATAAGAAGGGTCATCTCTT 57.154 34.615 4.13 0.00 37.02 2.85
6453 16795 8.869109 CATCTCTTAATAAGAAGGGTCATCTCT 58.131 37.037 4.13 0.00 37.02 3.10
6454 16796 8.865090 TCATCTCTTAATAAGAAGGGTCATCTC 58.135 37.037 4.13 0.00 37.02 2.75
6455 16797 8.646900 GTCATCTCTTAATAAGAAGGGTCATCT 58.353 37.037 4.13 0.00 37.02 2.90
6456 16798 8.424918 TGTCATCTCTTAATAAGAAGGGTCATC 58.575 37.037 4.13 0.00 37.02 2.92
6457 16799 8.324191 TGTCATCTCTTAATAAGAAGGGTCAT 57.676 34.615 4.13 0.00 37.02 3.06
6458 16800 7.733773 TGTCATCTCTTAATAAGAAGGGTCA 57.266 36.000 4.13 0.00 37.02 4.02
6459 16801 9.620259 AAATGTCATCTCTTAATAAGAAGGGTC 57.380 33.333 4.13 0.00 37.02 4.46
6460 16802 9.981460 AAAATGTCATCTCTTAATAAGAAGGGT 57.019 29.630 4.13 0.00 37.02 4.34


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.