Multiple sequence alignment - TraesCS2B01G340300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G340300 chr2B 100.000 2883 0 0 1 2883 485872556 485869674 0.000000e+00 5325
1 TraesCS2B01G340300 chr2B 94.828 290 15 0 2367 2656 107096493 107096782 1.220000e-123 453
2 TraesCS2B01G340300 chr2B 95.122 287 13 1 2374 2660 111009411 111009126 4.380000e-123 451
3 TraesCS2B01G340300 chr2D 97.560 1803 30 8 581 2374 412282189 412280392 0.000000e+00 3073
4 TraesCS2B01G340300 chr2D 97.917 96 2 0 2655 2750 412280395 412280300 1.780000e-37 167
5 TraesCS2B01G340300 chr2A 96.390 1773 37 11 621 2374 579617338 579615574 0.000000e+00 2894
6 TraesCS2B01G340300 chr2A 90.171 234 9 3 2655 2883 579615577 579615353 2.810000e-75 292
7 TraesCS2B01G340300 chr5D 95.455 286 12 1 2371 2656 77866528 77866812 3.390000e-124 455
8 TraesCS2B01G340300 chr5D 95.406 283 13 0 2374 2656 450608769 450609051 4.380000e-123 451
9 TraesCS2B01G340300 chr5D 94.138 290 15 2 2371 2660 545532366 545532653 9.480000e-120 440
10 TraesCS2B01G340300 chr6B 94.483 290 15 1 2374 2662 149443089 149443378 2.040000e-121 446
11 TraesCS2B01G340300 chr5B 94.138 290 16 1 2371 2660 671039515 671039803 9.480000e-120 440
12 TraesCS2B01G340300 chr3D 95.018 281 13 1 2374 2654 593683686 593683407 9.480000e-120 440
13 TraesCS2B01G340300 chr3D 93.814 291 17 1 2366 2656 536025581 536025870 1.230000e-118 436


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G340300 chr2B 485869674 485872556 2882 True 5325 5325 100.0000 1 2883 1 chr2B.!!$R2 2882
1 TraesCS2B01G340300 chr2D 412280300 412282189 1889 True 1620 3073 97.7385 581 2750 2 chr2D.!!$R1 2169
2 TraesCS2B01G340300 chr2A 579615353 579617338 1985 True 1593 2894 93.2805 621 2883 2 chr2A.!!$R1 2262

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
160 161 0.028902 AAAGAGGCAACAAACGCGAC 59.971 50.0 15.93 0.0 41.41 5.19 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2005 2022 0.923358 ACACACCACCCCAAAGAAGA 59.077 50.0 0.0 0.0 0.0 2.87 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 3.774528 AGATGCGGCCGCTGAAGA 61.775 61.111 45.79 29.48 42.51 2.87
18 19 2.590007 GATGCGGCCGCTGAAGAT 60.590 61.111 45.79 32.68 42.51 2.40
19 20 2.590007 ATGCGGCCGCTGAAGATC 60.590 61.111 45.79 19.46 42.51 2.75
20 21 3.390183 ATGCGGCCGCTGAAGATCA 62.390 57.895 45.79 27.14 42.51 2.92
21 22 3.567797 GCGGCCGCTGAAGATCAC 61.568 66.667 41.71 9.84 38.26 3.06
22 23 2.892425 CGGCCGCTGAAGATCACC 60.892 66.667 14.67 0.00 0.00 4.02
23 24 2.514824 GGCCGCTGAAGATCACCC 60.515 66.667 0.00 0.00 0.00 4.61
24 25 2.586792 GCCGCTGAAGATCACCCT 59.413 61.111 0.00 0.00 0.00 4.34
25 26 1.817099 GCCGCTGAAGATCACCCTG 60.817 63.158 0.00 0.00 0.00 4.45
26 27 1.153289 CCGCTGAAGATCACCCTGG 60.153 63.158 0.00 0.00 0.00 4.45
27 28 1.817099 CGCTGAAGATCACCCTGGC 60.817 63.158 0.00 0.00 0.00 4.85
28 29 1.452833 GCTGAAGATCACCCTGGCC 60.453 63.158 0.00 0.00 0.00 5.36
29 30 1.919600 GCTGAAGATCACCCTGGCCT 61.920 60.000 3.32 0.00 0.00 5.19
30 31 0.179936 CTGAAGATCACCCTGGCCTC 59.820 60.000 3.32 0.00 0.00 4.70
31 32 1.274703 TGAAGATCACCCTGGCCTCC 61.275 60.000 3.32 0.00 0.00 4.30
32 33 0.985490 GAAGATCACCCTGGCCTCCT 60.985 60.000 3.32 0.00 0.00 3.69
33 34 0.343372 AAGATCACCCTGGCCTCCTA 59.657 55.000 3.32 0.00 0.00 2.94
34 35 0.105246 AGATCACCCTGGCCTCCTAG 60.105 60.000 3.32 0.00 0.00 3.02
35 36 0.399233 GATCACCCTGGCCTCCTAGT 60.399 60.000 3.32 0.00 0.00 2.57
36 37 0.941963 ATCACCCTGGCCTCCTAGTA 59.058 55.000 3.32 0.00 0.00 1.82
37 38 0.032416 TCACCCTGGCCTCCTAGTAC 60.032 60.000 3.32 0.00 0.00 2.73
38 39 0.325296 CACCCTGGCCTCCTAGTACA 60.325 60.000 3.32 0.00 0.00 2.90
39 40 0.032017 ACCCTGGCCTCCTAGTACAG 60.032 60.000 3.32 0.00 0.00 2.74
40 41 0.760945 CCCTGGCCTCCTAGTACAGG 60.761 65.000 3.32 0.00 46.36 4.00
45 46 2.901975 CCTCCTAGTACAGGCAGCA 58.098 57.895 0.00 0.00 45.10 4.41
46 47 0.749649 CCTCCTAGTACAGGCAGCAG 59.250 60.000 0.00 0.00 45.10 4.24
47 48 0.749649 CTCCTAGTACAGGCAGCAGG 59.250 60.000 0.00 0.00 45.10 4.85
48 49 1.144936 CCTAGTACAGGCAGCAGGC 59.855 63.158 0.00 0.00 37.70 4.85
57 58 3.207669 GCAGCAGGCCCATCGAAG 61.208 66.667 0.00 0.00 36.11 3.79
58 59 3.207669 CAGCAGGCCCATCGAAGC 61.208 66.667 0.00 0.00 0.00 3.86
59 60 4.845580 AGCAGGCCCATCGAAGCG 62.846 66.667 0.00 0.00 0.00 4.68
61 62 4.161295 CAGGCCCATCGAAGCGGA 62.161 66.667 0.00 0.00 0.00 5.54
62 63 3.854669 AGGCCCATCGAAGCGGAG 61.855 66.667 0.00 0.00 0.00 4.63
63 64 3.849951 GGCCCATCGAAGCGGAGA 61.850 66.667 0.00 0.00 0.00 3.71
64 65 2.586357 GCCCATCGAAGCGGAGAC 60.586 66.667 0.00 0.00 0.00 3.36
76 77 4.154347 GGAGACGAGGGCAGCAGG 62.154 72.222 0.00 0.00 0.00 4.85
77 78 4.828925 GAGACGAGGGCAGCAGGC 62.829 72.222 0.00 0.00 43.74 4.85
85 86 3.741476 GGCAGCAGGCGACCTTTG 61.741 66.667 0.00 0.00 46.16 2.77
86 87 2.669569 GCAGCAGGCGACCTTTGA 60.670 61.111 9.74 0.00 0.00 2.69
87 88 2.684843 GCAGCAGGCGACCTTTGAG 61.685 63.158 9.74 0.00 0.00 3.02
88 89 1.302033 CAGCAGGCGACCTTTGAGT 60.302 57.895 0.00 0.00 0.00 3.41
89 90 1.302033 AGCAGGCGACCTTTGAGTG 60.302 57.895 0.00 0.00 0.00 3.51
90 91 1.598130 GCAGGCGACCTTTGAGTGT 60.598 57.895 0.00 0.00 0.00 3.55
91 92 1.845809 GCAGGCGACCTTTGAGTGTG 61.846 60.000 0.00 0.00 0.00 3.82
92 93 0.249868 CAGGCGACCTTTGAGTGTGA 60.250 55.000 0.00 0.00 0.00 3.58
93 94 0.034059 AGGCGACCTTTGAGTGTGAG 59.966 55.000 0.00 0.00 0.00 3.51
94 95 0.951040 GGCGACCTTTGAGTGTGAGG 60.951 60.000 0.00 0.00 36.62 3.86
95 96 1.569479 GCGACCTTTGAGTGTGAGGC 61.569 60.000 0.00 0.00 33.78 4.70
96 97 1.284982 CGACCTTTGAGTGTGAGGCG 61.285 60.000 0.00 0.00 33.78 5.52
97 98 0.951040 GACCTTTGAGTGTGAGGCGG 60.951 60.000 0.00 0.00 33.78 6.13
98 99 1.672356 CCTTTGAGTGTGAGGCGGG 60.672 63.158 0.00 0.00 0.00 6.13
99 100 2.281484 TTTGAGTGTGAGGCGGGC 60.281 61.111 0.00 0.00 0.00 6.13
100 101 4.680237 TTGAGTGTGAGGCGGGCG 62.680 66.667 0.00 0.00 0.00 6.13
122 123 2.125673 CGGCGACCGTGGATTTCT 60.126 61.111 0.00 0.00 42.73 2.52
123 124 1.140161 CGGCGACCGTGGATTTCTA 59.860 57.895 0.00 0.00 42.73 2.10
124 125 0.870307 CGGCGACCGTGGATTTCTAG 60.870 60.000 0.00 0.00 42.73 2.43
125 126 1.152383 GGCGACCGTGGATTTCTAGC 61.152 60.000 0.00 0.00 0.00 3.42
126 127 0.459585 GCGACCGTGGATTTCTAGCA 60.460 55.000 0.00 0.00 0.00 3.49
127 128 1.278238 CGACCGTGGATTTCTAGCAC 58.722 55.000 0.00 0.00 0.00 4.40
128 129 1.653151 GACCGTGGATTTCTAGCACC 58.347 55.000 0.00 0.00 0.00 5.01
129 130 0.108329 ACCGTGGATTTCTAGCACCG 60.108 55.000 0.00 0.00 0.00 4.94
130 131 0.810031 CCGTGGATTTCTAGCACCGG 60.810 60.000 0.00 0.00 0.00 5.28
131 132 0.810031 CGTGGATTTCTAGCACCGGG 60.810 60.000 6.32 0.00 0.00 5.73
132 133 0.463833 GTGGATTTCTAGCACCGGGG 60.464 60.000 6.32 0.84 0.00 5.73
133 134 1.148498 GGATTTCTAGCACCGGGGG 59.852 63.158 5.47 0.00 0.00 5.40
134 135 1.632965 GGATTTCTAGCACCGGGGGT 61.633 60.000 15.41 15.41 35.62 4.95
144 145 4.778143 CCGGGGGTGGCGAGAAAG 62.778 72.222 0.00 0.00 0.00 2.62
145 146 3.702048 CGGGGGTGGCGAGAAAGA 61.702 66.667 0.00 0.00 0.00 2.52
146 147 2.269241 GGGGGTGGCGAGAAAGAG 59.731 66.667 0.00 0.00 0.00 2.85
147 148 2.269241 GGGGTGGCGAGAAAGAGG 59.731 66.667 0.00 0.00 0.00 3.69
148 149 2.436824 GGGTGGCGAGAAAGAGGC 60.437 66.667 0.00 0.00 0.00 4.70
149 150 2.347490 GGTGGCGAGAAAGAGGCA 59.653 61.111 0.00 0.00 40.70 4.75
150 151 1.302511 GGTGGCGAGAAAGAGGCAA 60.303 57.895 0.00 0.00 44.46 4.52
151 152 1.578206 GGTGGCGAGAAAGAGGCAAC 61.578 60.000 0.00 0.00 44.46 4.17
152 153 0.884704 GTGGCGAGAAAGAGGCAACA 60.885 55.000 0.00 0.00 44.46 3.33
153 154 0.179032 TGGCGAGAAAGAGGCAACAA 60.179 50.000 0.00 0.00 40.02 2.83
154 155 0.951558 GGCGAGAAAGAGGCAACAAA 59.048 50.000 0.00 0.00 41.41 2.83
155 156 1.335051 GGCGAGAAAGAGGCAACAAAC 60.335 52.381 0.00 0.00 41.41 2.93
156 157 1.660333 GCGAGAAAGAGGCAACAAACG 60.660 52.381 0.00 0.00 41.41 3.60
157 158 1.660333 CGAGAAAGAGGCAACAAACGC 60.660 52.381 0.00 0.00 41.41 4.84
158 159 0.307760 AGAAAGAGGCAACAAACGCG 59.692 50.000 3.53 3.53 41.41 6.01
159 160 0.306533 GAAAGAGGCAACAAACGCGA 59.693 50.000 15.93 0.00 41.41 5.87
160 161 0.028902 AAAGAGGCAACAAACGCGAC 59.971 50.000 15.93 0.00 41.41 5.19
161 162 1.092921 AAGAGGCAACAAACGCGACA 61.093 50.000 15.93 0.00 41.41 4.35
162 163 1.092921 AGAGGCAACAAACGCGACAA 61.093 50.000 15.93 0.00 41.41 3.18
163 164 0.248296 GAGGCAACAAACGCGACAAA 60.248 50.000 15.93 0.00 41.41 2.83
164 165 0.171455 AGGCAACAAACGCGACAAAA 59.829 45.000 15.93 0.00 41.41 2.44
165 166 0.992802 GGCAACAAACGCGACAAAAA 59.007 45.000 15.93 0.00 0.00 1.94
166 167 1.266647 GGCAACAAACGCGACAAAAAC 60.267 47.619 15.93 0.00 0.00 2.43
167 168 1.651631 GCAACAAACGCGACAAAAACT 59.348 42.857 15.93 0.00 0.00 2.66
168 169 2.284232 GCAACAAACGCGACAAAAACTC 60.284 45.455 15.93 0.00 0.00 3.01
169 170 2.182904 ACAAACGCGACAAAAACTCC 57.817 45.000 15.93 0.00 0.00 3.85
170 171 1.741145 ACAAACGCGACAAAAACTCCT 59.259 42.857 15.93 0.00 0.00 3.69
171 172 2.223180 ACAAACGCGACAAAAACTCCTC 60.223 45.455 15.93 0.00 0.00 3.71
172 173 0.942252 AACGCGACAAAAACTCCTCC 59.058 50.000 15.93 0.00 0.00 4.30
173 174 1.219522 ACGCGACAAAAACTCCTCCG 61.220 55.000 15.93 0.00 0.00 4.63
174 175 0.942410 CGCGACAAAAACTCCTCCGA 60.942 55.000 0.00 0.00 0.00 4.55
175 176 1.223187 GCGACAAAAACTCCTCCGAA 58.777 50.000 0.00 0.00 0.00 4.30
176 177 1.194772 GCGACAAAAACTCCTCCGAAG 59.805 52.381 0.00 0.00 0.00 3.79
177 178 1.194772 CGACAAAAACTCCTCCGAAGC 59.805 52.381 0.00 0.00 0.00 3.86
178 179 2.218603 GACAAAAACTCCTCCGAAGCA 58.781 47.619 0.00 0.00 0.00 3.91
179 180 2.222027 ACAAAAACTCCTCCGAAGCAG 58.778 47.619 0.00 0.00 0.00 4.24
180 181 1.068954 CAAAAACTCCTCCGAAGCAGC 60.069 52.381 0.00 0.00 0.00 5.25
181 182 0.951040 AAAACTCCTCCGAAGCAGCG 60.951 55.000 0.00 0.00 0.00 5.18
201 202 4.265056 GCGGGTGGGGAAGTGTGT 62.265 66.667 0.00 0.00 0.00 3.72
202 203 2.281484 CGGGTGGGGAAGTGTGTG 60.281 66.667 0.00 0.00 0.00 3.82
203 204 2.115266 GGGTGGGGAAGTGTGTGG 59.885 66.667 0.00 0.00 0.00 4.17
204 205 2.457323 GGGTGGGGAAGTGTGTGGA 61.457 63.158 0.00 0.00 0.00 4.02
205 206 1.767692 GGTGGGGAAGTGTGTGGAT 59.232 57.895 0.00 0.00 0.00 3.41
206 207 0.609131 GGTGGGGAAGTGTGTGGATG 60.609 60.000 0.00 0.00 0.00 3.51
207 208 1.074775 TGGGGAAGTGTGTGGATGC 59.925 57.895 0.00 0.00 0.00 3.91
208 209 2.040544 GGGGAAGTGTGTGGATGCG 61.041 63.158 0.00 0.00 0.00 4.73
209 210 2.040544 GGGAAGTGTGTGGATGCGG 61.041 63.158 0.00 0.00 0.00 5.69
210 211 2.040544 GGAAGTGTGTGGATGCGGG 61.041 63.158 0.00 0.00 0.00 6.13
211 212 1.302511 GAAGTGTGTGGATGCGGGT 60.303 57.895 0.00 0.00 0.00 5.28
212 213 0.889186 GAAGTGTGTGGATGCGGGTT 60.889 55.000 0.00 0.00 0.00 4.11
213 214 0.467290 AAGTGTGTGGATGCGGGTTT 60.467 50.000 0.00 0.00 0.00 3.27
214 215 0.398696 AGTGTGTGGATGCGGGTTTA 59.601 50.000 0.00 0.00 0.00 2.01
215 216 0.802494 GTGTGTGGATGCGGGTTTAG 59.198 55.000 0.00 0.00 0.00 1.85
216 217 0.322098 TGTGTGGATGCGGGTTTAGG 60.322 55.000 0.00 0.00 0.00 2.69
217 218 1.029947 GTGTGGATGCGGGTTTAGGG 61.030 60.000 0.00 0.00 0.00 3.53
218 219 1.301954 GTGGATGCGGGTTTAGGGT 59.698 57.895 0.00 0.00 0.00 4.34
219 220 0.323087 GTGGATGCGGGTTTAGGGTT 60.323 55.000 0.00 0.00 0.00 4.11
220 221 0.406361 TGGATGCGGGTTTAGGGTTT 59.594 50.000 0.00 0.00 0.00 3.27
221 222 1.634459 TGGATGCGGGTTTAGGGTTTA 59.366 47.619 0.00 0.00 0.00 2.01
222 223 2.019249 GGATGCGGGTTTAGGGTTTAC 58.981 52.381 0.00 0.00 0.00 2.01
223 224 2.618559 GGATGCGGGTTTAGGGTTTACA 60.619 50.000 0.00 0.00 0.00 2.41
224 225 2.653234 TGCGGGTTTAGGGTTTACAA 57.347 45.000 0.00 0.00 0.00 2.41
225 226 2.941480 TGCGGGTTTAGGGTTTACAAA 58.059 42.857 0.00 0.00 0.00 2.83
226 227 2.622470 TGCGGGTTTAGGGTTTACAAAC 59.378 45.455 0.00 0.00 38.17 2.93
227 228 2.350676 GCGGGTTTAGGGTTTACAAACG 60.351 50.000 0.00 0.00 39.77 3.60
232 233 2.256158 GGGTTTACAAACGCCGGC 59.744 61.111 19.07 19.07 43.57 6.13
233 234 2.263021 GGGTTTACAAACGCCGGCT 61.263 57.895 26.68 7.77 43.57 5.52
234 235 0.954938 GGGTTTACAAACGCCGGCTA 60.955 55.000 26.68 6.55 43.57 3.93
235 236 0.445043 GGTTTACAAACGCCGGCTAG 59.555 55.000 26.68 12.89 39.77 3.42
236 237 1.431496 GTTTACAAACGCCGGCTAGA 58.569 50.000 26.68 1.30 0.00 2.43
237 238 1.799994 GTTTACAAACGCCGGCTAGAA 59.200 47.619 26.68 6.92 0.00 2.10
238 239 1.431496 TTACAAACGCCGGCTAGAAC 58.569 50.000 26.68 0.00 0.00 3.01
239 240 0.604578 TACAAACGCCGGCTAGAACT 59.395 50.000 26.68 4.70 0.00 3.01
240 241 0.669625 ACAAACGCCGGCTAGAACTC 60.670 55.000 26.68 0.00 0.00 3.01
241 242 1.079336 AAACGCCGGCTAGAACTCC 60.079 57.895 26.68 0.00 0.00 3.85
242 243 1.542187 AAACGCCGGCTAGAACTCCT 61.542 55.000 26.68 0.00 0.00 3.69
243 244 1.946475 AACGCCGGCTAGAACTCCTC 61.946 60.000 26.68 0.00 0.00 3.71
244 245 2.816012 GCCGGCTAGAACTCCTCC 59.184 66.667 22.15 0.00 0.00 4.30
245 246 3.121019 CCGGCTAGAACTCCTCCG 58.879 66.667 0.00 0.00 39.79 4.63
246 247 1.453379 CCGGCTAGAACTCCTCCGA 60.453 63.158 4.51 0.00 42.43 4.55
247 248 1.035932 CCGGCTAGAACTCCTCCGAA 61.036 60.000 4.51 0.00 42.43 4.30
248 249 0.382515 CGGCTAGAACTCCTCCGAAG 59.617 60.000 0.00 0.00 42.43 3.79
249 250 1.476477 GGCTAGAACTCCTCCGAAGT 58.524 55.000 0.00 0.00 0.00 3.01
250 251 1.135333 GGCTAGAACTCCTCCGAAGTG 59.865 57.143 0.00 0.00 0.00 3.16
251 252 1.135333 GCTAGAACTCCTCCGAAGTGG 59.865 57.143 0.00 0.00 40.09 4.00
252 253 1.135333 CTAGAACTCCTCCGAAGTGGC 59.865 57.143 0.00 0.00 37.80 5.01
253 254 1.446272 GAACTCCTCCGAAGTGGCG 60.446 63.158 0.00 0.00 37.80 5.69
254 255 1.874345 GAACTCCTCCGAAGTGGCGA 61.874 60.000 0.00 0.00 37.80 5.54
255 256 1.258445 AACTCCTCCGAAGTGGCGAT 61.258 55.000 0.00 0.00 37.80 4.58
256 257 1.227089 CTCCTCCGAAGTGGCGATG 60.227 63.158 0.00 0.00 37.80 3.84
257 258 2.892425 CCTCCGAAGTGGCGATGC 60.892 66.667 0.00 0.00 37.80 3.91
258 259 3.257561 CTCCGAAGTGGCGATGCG 61.258 66.667 0.00 0.00 37.80 4.73
259 260 4.812476 TCCGAAGTGGCGATGCGG 62.812 66.667 1.83 1.83 43.11 5.69
269 270 4.457496 CGATGCGGCTGGTGGAGT 62.457 66.667 0.00 0.00 0.00 3.85
270 271 2.821366 GATGCGGCTGGTGGAGTG 60.821 66.667 0.00 0.00 0.00 3.51
271 272 3.612247 GATGCGGCTGGTGGAGTGT 62.612 63.158 0.00 0.00 0.00 3.55
272 273 3.907260 ATGCGGCTGGTGGAGTGTG 62.907 63.158 0.00 0.00 0.00 3.82
273 274 4.626081 GCGGCTGGTGGAGTGTGT 62.626 66.667 0.00 0.00 0.00 3.72
274 275 2.666190 CGGCTGGTGGAGTGTGTG 60.666 66.667 0.00 0.00 0.00 3.82
275 276 2.828868 GGCTGGTGGAGTGTGTGA 59.171 61.111 0.00 0.00 0.00 3.58
276 277 1.148273 GGCTGGTGGAGTGTGTGAA 59.852 57.895 0.00 0.00 0.00 3.18
277 278 1.166531 GGCTGGTGGAGTGTGTGAAC 61.167 60.000 0.00 0.00 0.00 3.18
278 279 1.498865 GCTGGTGGAGTGTGTGAACG 61.499 60.000 0.00 0.00 0.00 3.95
279 280 1.498865 CTGGTGGAGTGTGTGAACGC 61.499 60.000 0.00 0.00 0.00 4.84
280 281 2.594962 GGTGGAGTGTGTGAACGCG 61.595 63.158 3.53 3.53 0.00 6.01
281 282 1.881252 GTGGAGTGTGTGAACGCGT 60.881 57.895 5.58 5.58 0.00 6.01
282 283 0.595567 GTGGAGTGTGTGAACGCGTA 60.596 55.000 14.46 0.00 0.00 4.42
283 284 0.595567 TGGAGTGTGTGAACGCGTAC 60.596 55.000 14.46 9.06 0.00 3.67
285 286 1.602877 GAGTGTGTGAACGCGTACGG 61.603 60.000 14.46 9.73 46.04 4.02
286 287 2.354891 TGTGTGAACGCGTACGGG 60.355 61.111 28.27 28.27 46.04 5.28
287 288 2.355009 GTGTGAACGCGTACGGGT 60.355 61.111 29.66 29.66 46.04 5.28
288 289 2.050168 TGTGAACGCGTACGGGTC 60.050 61.111 33.87 25.92 46.04 4.46
289 290 2.050168 GTGAACGCGTACGGGTCA 60.050 61.111 33.87 27.76 46.04 4.02
290 291 2.050168 TGAACGCGTACGGGTCAC 60.050 61.111 33.87 28.34 46.04 3.67
291 292 2.806621 GAACGCGTACGGGTCACC 60.807 66.667 33.87 22.55 46.04 4.02
308 309 4.760047 CGACTGACGGGCCAAGGG 62.760 72.222 4.39 0.00 38.46 3.95
309 310 4.410400 GACTGACGGGCCAAGGGG 62.410 72.222 4.39 0.00 37.18 4.79
310 311 4.974438 ACTGACGGGCCAAGGGGA 62.974 66.667 4.39 0.00 35.59 4.81
311 312 4.101448 CTGACGGGCCAAGGGGAG 62.101 72.222 4.39 0.00 35.59 4.30
312 313 4.649705 TGACGGGCCAAGGGGAGA 62.650 66.667 4.39 0.00 35.59 3.71
313 314 3.327404 GACGGGCCAAGGGGAGAA 61.327 66.667 4.39 0.00 35.59 2.87
314 315 3.623703 GACGGGCCAAGGGGAGAAC 62.624 68.421 4.39 0.00 35.59 3.01
315 316 3.646715 CGGGCCAAGGGGAGAACA 61.647 66.667 4.39 0.00 35.59 3.18
316 317 2.356667 GGGCCAAGGGGAGAACAG 59.643 66.667 4.39 0.00 35.59 3.16
317 318 2.356667 GGCCAAGGGGAGAACAGG 59.643 66.667 0.00 0.00 35.59 4.00
318 319 2.231380 GGCCAAGGGGAGAACAGGA 61.231 63.158 0.00 0.00 35.59 3.86
319 320 1.767692 GCCAAGGGGAGAACAGGAA 59.232 57.895 0.00 0.00 35.59 3.36
320 321 0.322906 GCCAAGGGGAGAACAGGAAG 60.323 60.000 0.00 0.00 35.59 3.46
321 322 1.362224 CCAAGGGGAGAACAGGAAGA 58.638 55.000 0.00 0.00 35.59 2.87
322 323 1.705186 CCAAGGGGAGAACAGGAAGAA 59.295 52.381 0.00 0.00 35.59 2.52
323 324 2.553247 CCAAGGGGAGAACAGGAAGAAC 60.553 54.545 0.00 0.00 35.59 3.01
324 325 0.977395 AGGGGAGAACAGGAAGAACG 59.023 55.000 0.00 0.00 0.00 3.95
325 326 0.673956 GGGGAGAACAGGAAGAACGC 60.674 60.000 0.00 0.00 0.00 4.84
326 327 0.673956 GGGAGAACAGGAAGAACGCC 60.674 60.000 0.00 0.00 0.00 5.68
327 328 0.673956 GGAGAACAGGAAGAACGCCC 60.674 60.000 0.00 0.00 0.00 6.13
328 329 1.004918 AGAACAGGAAGAACGCCCG 60.005 57.895 0.00 0.00 0.00 6.13
329 330 1.301479 GAACAGGAAGAACGCCCGT 60.301 57.895 0.00 0.00 0.00 5.28
330 331 1.566018 GAACAGGAAGAACGCCCGTG 61.566 60.000 0.00 0.00 0.00 4.94
331 332 3.423154 CAGGAAGAACGCCCGTGC 61.423 66.667 0.00 0.00 0.00 5.34
332 333 3.936203 AGGAAGAACGCCCGTGCA 61.936 61.111 1.17 0.00 37.32 4.57
333 334 3.723348 GGAAGAACGCCCGTGCAC 61.723 66.667 6.82 6.82 37.32 4.57
334 335 4.072088 GAAGAACGCCCGTGCACG 62.072 66.667 31.77 31.77 37.32 5.34
335 336 4.903010 AAGAACGCCCGTGCACGT 62.903 61.111 34.81 18.54 46.07 4.49
342 343 3.708734 CCCGTGCACGTTCGGTTC 61.709 66.667 34.81 0.00 44.51 3.62
343 344 2.962786 CCGTGCACGTTCGGTTCA 60.963 61.111 34.81 0.00 41.58 3.18
344 345 2.314647 CCGTGCACGTTCGGTTCAT 61.315 57.895 34.81 0.00 41.58 2.57
345 346 1.154672 CGTGCACGTTCGGTTCATG 60.155 57.895 30.50 0.00 34.11 3.07
346 347 1.827315 CGTGCACGTTCGGTTCATGT 61.827 55.000 30.50 0.00 34.11 3.21
347 348 0.110823 GTGCACGTTCGGTTCATGTC 60.111 55.000 0.00 0.00 0.00 3.06
348 349 1.225376 TGCACGTTCGGTTCATGTCC 61.225 55.000 0.00 0.00 0.00 4.02
350 351 0.942410 CACGTTCGGTTCATGTCCGT 60.942 55.000 23.10 8.67 46.86 4.69
351 352 0.942410 ACGTTCGGTTCATGTCCGTG 60.942 55.000 23.10 18.08 46.86 4.94
352 353 1.495951 GTTCGGTTCATGTCCGTGC 59.504 57.895 23.10 16.22 46.86 5.34
353 354 1.669760 TTCGGTTCATGTCCGTGCC 60.670 57.895 23.10 6.12 46.86 5.01
354 355 3.124921 CGGTTCATGTCCGTGCCC 61.125 66.667 18.58 0.00 42.62 5.36
355 356 2.033448 GGTTCATGTCCGTGCCCA 59.967 61.111 0.00 0.00 0.00 5.36
356 357 2.332654 GGTTCATGTCCGTGCCCAC 61.333 63.158 0.00 0.00 0.00 4.61
374 375 3.376546 GCAAACCCTGCCCGAATT 58.623 55.556 0.00 0.00 46.13 2.17
375 376 1.671166 GCAAACCCTGCCCGAATTT 59.329 52.632 0.00 0.00 46.13 1.82
376 377 0.670239 GCAAACCCTGCCCGAATTTG 60.670 55.000 0.00 0.00 46.13 2.32
377 378 0.037419 CAAACCCTGCCCGAATTTGG 60.037 55.000 4.52 4.52 0.00 3.28
384 385 4.432601 CCCGAATTTGGGCCAAGA 57.567 55.556 19.90 11.05 43.70 3.02
385 386 2.192605 CCCGAATTTGGGCCAAGAG 58.807 57.895 19.90 11.55 43.70 2.85
386 387 0.611896 CCCGAATTTGGGCCAAGAGT 60.612 55.000 19.90 9.89 43.70 3.24
387 388 0.527565 CCGAATTTGGGCCAAGAGTG 59.472 55.000 19.90 10.91 0.00 3.51
389 390 0.897621 GAATTTGGGCCAAGAGTGGG 59.102 55.000 19.90 0.00 46.09 4.61
396 397 4.722700 CCAAGAGTGGGCCGTGGG 62.723 72.222 0.00 0.00 41.77 4.61
408 409 2.250190 CGTGGGCGGACGAAAAAC 59.750 61.111 1.76 0.00 42.10 2.43
409 410 2.535788 CGTGGGCGGACGAAAAACA 61.536 57.895 1.76 0.00 42.10 2.83
410 411 1.281656 GTGGGCGGACGAAAAACAG 59.718 57.895 0.00 0.00 0.00 3.16
411 412 1.146485 TGGGCGGACGAAAAACAGA 59.854 52.632 0.00 0.00 0.00 3.41
412 413 1.161563 TGGGCGGACGAAAAACAGAC 61.162 55.000 0.00 0.00 0.00 3.51
413 414 1.161563 GGGCGGACGAAAAACAGACA 61.162 55.000 0.00 0.00 0.00 3.41
414 415 0.041576 GGCGGACGAAAAACAGACAC 60.042 55.000 0.00 0.00 0.00 3.67
415 416 0.041576 GCGGACGAAAAACAGACACC 60.042 55.000 0.00 0.00 0.00 4.16
416 417 1.292061 CGGACGAAAAACAGACACCA 58.708 50.000 0.00 0.00 0.00 4.17
417 418 1.666700 CGGACGAAAAACAGACACCAA 59.333 47.619 0.00 0.00 0.00 3.67
418 419 2.289547 CGGACGAAAAACAGACACCAAT 59.710 45.455 0.00 0.00 0.00 3.16
419 420 3.606153 CGGACGAAAAACAGACACCAATC 60.606 47.826 0.00 0.00 0.00 2.67
420 421 3.304458 GGACGAAAAACAGACACCAATCC 60.304 47.826 0.00 0.00 0.00 3.01
421 422 2.289547 ACGAAAAACAGACACCAATCCG 59.710 45.455 0.00 0.00 0.00 4.18
422 423 2.289547 CGAAAAACAGACACCAATCCGT 59.710 45.455 0.00 0.00 0.00 4.69
423 424 3.242936 CGAAAAACAGACACCAATCCGTT 60.243 43.478 0.00 0.00 0.00 4.44
424 425 4.678622 GAAAAACAGACACCAATCCGTTT 58.321 39.130 0.00 0.00 0.00 3.60
425 426 3.708563 AAACAGACACCAATCCGTTTG 57.291 42.857 0.00 0.00 34.93 2.93
432 433 2.874751 CAATCCGTTTGGGTCGCC 59.125 61.111 0.00 0.00 37.00 5.54
433 434 1.674322 CAATCCGTTTGGGTCGCCT 60.674 57.895 0.00 0.00 37.00 5.52
434 435 1.074248 AATCCGTTTGGGTCGCCTT 59.926 52.632 0.00 0.00 37.00 4.35
435 436 1.241315 AATCCGTTTGGGTCGCCTTG 61.241 55.000 0.00 0.00 37.00 3.61
436 437 2.406002 ATCCGTTTGGGTCGCCTTGT 62.406 55.000 0.00 0.00 37.00 3.16
437 438 2.190841 CCGTTTGGGTCGCCTTGTT 61.191 57.895 0.00 0.00 0.00 2.83
438 439 1.008995 CGTTTGGGTCGCCTTGTTG 60.009 57.895 0.00 0.00 0.00 3.33
439 440 1.720694 CGTTTGGGTCGCCTTGTTGT 61.721 55.000 0.00 0.00 0.00 3.32
440 441 0.248866 GTTTGGGTCGCCTTGTTGTG 60.249 55.000 0.00 0.00 0.00 3.33
441 442 2.010582 TTTGGGTCGCCTTGTTGTGC 62.011 55.000 0.00 0.00 0.00 4.57
442 443 3.670377 GGGTCGCCTTGTTGTGCC 61.670 66.667 0.00 0.00 0.00 5.01
443 444 4.025401 GGTCGCCTTGTTGTGCCG 62.025 66.667 0.00 0.00 0.00 5.69
444 445 4.683334 GTCGCCTTGTTGTGCCGC 62.683 66.667 0.00 0.00 0.00 6.53
445 446 4.927782 TCGCCTTGTTGTGCCGCT 62.928 61.111 0.00 0.00 0.00 5.52
446 447 3.047280 CGCCTTGTTGTGCCGCTA 61.047 61.111 0.00 0.00 0.00 4.26
447 448 2.398554 CGCCTTGTTGTGCCGCTAT 61.399 57.895 0.00 0.00 0.00 2.97
448 449 1.883021 GCCTTGTTGTGCCGCTATT 59.117 52.632 0.00 0.00 0.00 1.73
449 450 0.243636 GCCTTGTTGTGCCGCTATTT 59.756 50.000 0.00 0.00 0.00 1.40
450 451 1.732405 GCCTTGTTGTGCCGCTATTTC 60.732 52.381 0.00 0.00 0.00 2.17
451 452 1.812571 CCTTGTTGTGCCGCTATTTCT 59.187 47.619 0.00 0.00 0.00 2.52
452 453 2.414559 CCTTGTTGTGCCGCTATTTCTG 60.415 50.000 0.00 0.00 0.00 3.02
453 454 1.890876 TGTTGTGCCGCTATTTCTGT 58.109 45.000 0.00 0.00 0.00 3.41
454 455 1.804151 TGTTGTGCCGCTATTTCTGTC 59.196 47.619 0.00 0.00 0.00 3.51
455 456 1.130561 GTTGTGCCGCTATTTCTGTCC 59.869 52.381 0.00 0.00 0.00 4.02
456 457 0.739462 TGTGCCGCTATTTCTGTCCG 60.739 55.000 0.00 0.00 0.00 4.79
457 458 0.739813 GTGCCGCTATTTCTGTCCGT 60.740 55.000 0.00 0.00 0.00 4.69
458 459 0.036765 TGCCGCTATTTCTGTCCGTT 60.037 50.000 0.00 0.00 0.00 4.44
459 460 1.084289 GCCGCTATTTCTGTCCGTTT 58.916 50.000 0.00 0.00 0.00 3.60
460 461 1.062148 GCCGCTATTTCTGTCCGTTTC 59.938 52.381 0.00 0.00 0.00 2.78
461 462 1.323534 CCGCTATTTCTGTCCGTTTCG 59.676 52.381 0.00 0.00 0.00 3.46
462 463 2.256174 CGCTATTTCTGTCCGTTTCGA 58.744 47.619 0.00 0.00 0.00 3.71
463 464 2.858344 CGCTATTTCTGTCCGTTTCGAT 59.142 45.455 0.00 0.00 0.00 3.59
464 465 3.301835 CGCTATTTCTGTCCGTTTCGATG 60.302 47.826 0.00 0.00 0.00 3.84
465 466 3.863424 GCTATTTCTGTCCGTTTCGATGA 59.137 43.478 0.00 0.00 0.00 2.92
466 467 4.026475 GCTATTTCTGTCCGTTTCGATGAG 60.026 45.833 0.00 0.00 0.00 2.90
467 468 2.363788 TTCTGTCCGTTTCGATGAGG 57.636 50.000 0.00 0.00 0.00 3.86
468 469 0.108804 TCTGTCCGTTTCGATGAGGC 60.109 55.000 0.00 0.00 0.00 4.70
469 470 1.079405 TGTCCGTTTCGATGAGGCC 60.079 57.895 0.00 0.00 0.00 5.19
470 471 2.165301 GTCCGTTTCGATGAGGCCG 61.165 63.158 0.00 0.00 0.00 6.13
471 472 2.125673 CCGTTTCGATGAGGCCGT 60.126 61.111 0.00 0.00 0.00 5.68
472 473 2.452813 CCGTTTCGATGAGGCCGTG 61.453 63.158 0.00 0.00 0.00 4.94
473 474 1.736645 CGTTTCGATGAGGCCGTGT 60.737 57.895 0.00 0.00 0.00 4.49
474 475 1.787847 GTTTCGATGAGGCCGTGTG 59.212 57.895 0.00 0.00 0.00 3.82
475 476 2.032634 TTTCGATGAGGCCGTGTGC 61.033 57.895 0.00 0.00 40.16 4.57
476 477 4.794439 TCGATGAGGCCGTGTGCG 62.794 66.667 0.00 0.00 42.61 5.34
486 487 3.403057 CGTGTGCGTCGGAGTTGG 61.403 66.667 0.00 0.00 0.00 3.77
487 488 3.712881 GTGTGCGTCGGAGTTGGC 61.713 66.667 0.00 0.00 0.00 4.52
488 489 4.980805 TGTGCGTCGGAGTTGGCC 62.981 66.667 0.00 0.00 0.00 5.36
489 490 4.681978 GTGCGTCGGAGTTGGCCT 62.682 66.667 3.32 0.00 0.00 5.19
490 491 3.936203 TGCGTCGGAGTTGGCCTT 61.936 61.111 3.32 0.00 0.00 4.35
491 492 2.263540 GCGTCGGAGTTGGCCTTA 59.736 61.111 3.32 0.00 0.00 2.69
492 493 2.098831 GCGTCGGAGTTGGCCTTAC 61.099 63.158 3.32 1.81 0.00 2.34
493 494 1.447314 CGTCGGAGTTGGCCTTACC 60.447 63.158 3.32 1.29 39.84 2.85
494 495 1.078637 GTCGGAGTTGGCCTTACCC 60.079 63.158 3.32 5.31 37.83 3.69
495 496 1.536907 TCGGAGTTGGCCTTACCCA 60.537 57.895 3.32 0.00 37.83 4.51
496 497 0.912487 TCGGAGTTGGCCTTACCCAT 60.912 55.000 3.32 0.00 37.83 4.00
497 498 0.834612 CGGAGTTGGCCTTACCCATA 59.165 55.000 3.32 0.00 37.83 2.74
498 499 1.420138 CGGAGTTGGCCTTACCCATAT 59.580 52.381 3.32 0.00 37.83 1.78
499 500 2.635915 CGGAGTTGGCCTTACCCATATA 59.364 50.000 3.32 0.00 37.83 0.86
500 501 3.071892 CGGAGTTGGCCTTACCCATATAA 59.928 47.826 3.32 0.00 37.83 0.98
501 502 4.263331 CGGAGTTGGCCTTACCCATATAAT 60.263 45.833 3.32 0.00 37.83 1.28
502 503 5.010282 GGAGTTGGCCTTACCCATATAATG 58.990 45.833 3.32 0.00 37.83 1.90
503 504 4.407365 AGTTGGCCTTACCCATATAATGC 58.593 43.478 3.32 0.00 37.83 3.56
504 505 4.141041 AGTTGGCCTTACCCATATAATGCA 60.141 41.667 3.32 0.00 37.83 3.96
505 506 4.673328 TGGCCTTACCCATATAATGCAT 57.327 40.909 3.32 0.00 37.83 3.96
506 507 5.787846 TGGCCTTACCCATATAATGCATA 57.212 39.130 3.32 0.00 37.83 3.14
507 508 6.339999 TGGCCTTACCCATATAATGCATAT 57.660 37.500 3.32 0.00 37.83 1.78
508 509 6.128486 TGGCCTTACCCATATAATGCATATG 58.872 40.000 3.32 0.00 44.26 1.78
509 510 5.010012 GGCCTTACCCATATAATGCATATGC 59.990 44.000 21.09 21.09 43.60 3.14
526 527 7.058298 GCATATGCATATCTCACTGTTAGTG 57.942 40.000 22.84 3.71 43.28 2.74
527 528 6.648310 GCATATGCATATCTCACTGTTAGTGT 59.352 38.462 22.84 0.00 42.86 3.55
528 529 7.172190 GCATATGCATATCTCACTGTTAGTGTT 59.828 37.037 22.84 0.00 42.86 3.32
529 530 6.915544 ATGCATATCTCACTGTTAGTGTTG 57.084 37.500 0.00 4.25 46.03 3.33
530 531 6.036577 TGCATATCTCACTGTTAGTGTTGA 57.963 37.500 8.64 8.70 46.03 3.18
531 532 6.463360 TGCATATCTCACTGTTAGTGTTGAA 58.537 36.000 8.64 0.00 46.03 2.69
532 533 6.368791 TGCATATCTCACTGTTAGTGTTGAAC 59.631 38.462 8.64 0.00 46.03 3.18
533 534 6.591834 GCATATCTCACTGTTAGTGTTGAACT 59.408 38.462 8.64 0.00 46.03 3.01
534 535 7.118390 GCATATCTCACTGTTAGTGTTGAACTT 59.882 37.037 8.64 0.00 46.03 2.66
535 536 6.851222 ATCTCACTGTTAGTGTTGAACTTG 57.149 37.500 8.64 0.00 46.03 3.16
536 537 5.116180 TCTCACTGTTAGTGTTGAACTTGG 58.884 41.667 8.64 0.00 46.03 3.61
537 538 4.196193 TCACTGTTAGTGTTGAACTTGGG 58.804 43.478 8.64 0.00 46.03 4.12
538 539 4.080807 TCACTGTTAGTGTTGAACTTGGGA 60.081 41.667 8.64 0.00 46.03 4.37
539 540 4.638421 CACTGTTAGTGTTGAACTTGGGAA 59.362 41.667 0.00 0.00 41.19 3.97
540 541 4.638865 ACTGTTAGTGTTGAACTTGGGAAC 59.361 41.667 0.00 0.00 40.56 3.62
541 542 3.623960 TGTTAGTGTTGAACTTGGGAACG 59.376 43.478 0.00 0.00 40.56 3.95
542 543 2.702592 AGTGTTGAACTTGGGAACGA 57.297 45.000 0.00 0.00 34.57 3.85
543 544 3.208747 AGTGTTGAACTTGGGAACGAT 57.791 42.857 0.00 0.00 34.57 3.73
544 545 4.345859 AGTGTTGAACTTGGGAACGATA 57.654 40.909 0.00 0.00 34.57 2.92
545 546 4.906618 AGTGTTGAACTTGGGAACGATAT 58.093 39.130 0.00 0.00 34.57 1.63
546 547 4.695455 AGTGTTGAACTTGGGAACGATATG 59.305 41.667 0.00 0.00 34.57 1.78
547 548 4.693566 GTGTTGAACTTGGGAACGATATGA 59.306 41.667 0.00 0.00 0.00 2.15
548 549 5.180492 GTGTTGAACTTGGGAACGATATGAA 59.820 40.000 0.00 0.00 0.00 2.57
549 550 5.411361 TGTTGAACTTGGGAACGATATGAAG 59.589 40.000 0.00 0.00 0.00 3.02
550 551 5.414789 TGAACTTGGGAACGATATGAAGA 57.585 39.130 0.00 0.00 0.00 2.87
551 552 5.800296 TGAACTTGGGAACGATATGAAGAA 58.200 37.500 0.00 0.00 0.00 2.52
552 553 6.414732 TGAACTTGGGAACGATATGAAGAAT 58.585 36.000 0.00 0.00 0.00 2.40
553 554 7.561251 TGAACTTGGGAACGATATGAAGAATA 58.439 34.615 0.00 0.00 0.00 1.75
554 555 8.210946 TGAACTTGGGAACGATATGAAGAATAT 58.789 33.333 0.00 0.00 33.94 1.28
555 556 8.980481 AACTTGGGAACGATATGAAGAATATT 57.020 30.769 0.00 0.00 31.22 1.28
556 557 8.980481 ACTTGGGAACGATATGAAGAATATTT 57.020 30.769 0.00 0.00 31.22 1.40
557 558 8.840321 ACTTGGGAACGATATGAAGAATATTTG 58.160 33.333 0.00 0.00 31.22 2.32
558 559 8.972458 TTGGGAACGATATGAAGAATATTTGA 57.028 30.769 0.00 0.00 31.22 2.69
559 560 9.573166 TTGGGAACGATATGAAGAATATTTGAT 57.427 29.630 0.00 0.00 31.22 2.57
560 561 9.002600 TGGGAACGATATGAAGAATATTTGATG 57.997 33.333 0.00 0.00 31.22 3.07
561 562 8.454106 GGGAACGATATGAAGAATATTTGATGG 58.546 37.037 0.00 0.00 31.22 3.51
562 563 9.003658 GGAACGATATGAAGAATATTTGATGGT 57.996 33.333 0.00 0.00 31.22 3.55
584 585 5.803967 GGTAGAAAACTAGTACCATGTGTCG 59.196 44.000 6.86 0.00 36.89 4.35
603 604 1.679944 CGTGCCATCTCCAAAGGTGAT 60.680 52.381 0.00 0.00 35.47 3.06
605 606 1.634973 TGCCATCTCCAAAGGTGATCA 59.365 47.619 0.00 0.00 35.47 2.92
611 612 4.063998 TCTCCAAAGGTGATCATCATCG 57.936 45.455 9.06 0.00 31.44 3.84
613 614 4.649218 TCTCCAAAGGTGATCATCATCGTA 59.351 41.667 9.06 0.00 31.44 3.43
646 647 1.878953 ATAACGCCCGTGAATGGATC 58.121 50.000 0.00 0.00 0.00 3.36
671 673 7.227711 TCGATCGATCTTCTTTCACTATTCTCT 59.772 37.037 22.43 0.00 0.00 3.10
725 728 0.987294 AGTCCCCACAGATCACAAGG 59.013 55.000 0.00 0.00 0.00 3.61
726 729 0.984230 GTCCCCACAGATCACAAGGA 59.016 55.000 0.00 0.00 0.00 3.36
727 730 1.065854 GTCCCCACAGATCACAAGGAG 60.066 57.143 0.00 0.00 0.00 3.69
728 731 0.393537 CCCCACAGATCACAAGGAGC 60.394 60.000 0.00 0.00 0.00 4.70
729 732 0.325933 CCCACAGATCACAAGGAGCA 59.674 55.000 0.00 0.00 33.23 4.26
730 733 1.064906 CCCACAGATCACAAGGAGCAT 60.065 52.381 0.00 0.00 33.23 3.79
731 734 2.014857 CCACAGATCACAAGGAGCATG 58.985 52.381 0.00 0.00 33.23 4.06
1203 1209 0.246635 CCGAGTTCATCAACCCGTCT 59.753 55.000 0.00 0.00 32.11 4.18
1223 1229 1.300233 GGCTCGATGGCTCGTAAGG 60.300 63.158 6.32 0.00 45.25 2.69
1426 1442 4.899239 GAGCTGATCCACGGGCGG 62.899 72.222 0.00 0.00 0.00 6.13
1675 1691 1.597027 CTTCGCCAACTTCACCGGT 60.597 57.895 0.00 0.00 0.00 5.28
1946 1963 1.083806 TTGCATCAGATCGGACGCAC 61.084 55.000 16.03 0.00 0.00 5.34
2005 2022 2.028112 AGCAATGTATCTGTGTCCGTGT 60.028 45.455 0.00 0.00 0.00 4.49
2228 2252 4.067972 TGAAGGAAGCACGAAAACTAGT 57.932 40.909 0.00 0.00 0.00 2.57
2370 2397 2.437359 AGCACGCATTCCTGAGCC 60.437 61.111 0.00 0.00 0.00 4.70
2371 2398 2.437359 GCACGCATTCCTGAGCCT 60.437 61.111 0.00 0.00 0.00 4.58
2372 2399 2.758089 GCACGCATTCCTGAGCCTG 61.758 63.158 0.00 0.00 0.00 4.85
2373 2400 1.078918 CACGCATTCCTGAGCCTGA 60.079 57.895 0.00 0.00 0.00 3.86
2374 2401 1.088340 CACGCATTCCTGAGCCTGAG 61.088 60.000 0.00 0.00 0.00 3.35
2375 2402 1.523258 CGCATTCCTGAGCCTGAGG 60.523 63.158 0.00 0.00 0.00 3.86
2385 2412 2.677875 GCCTGAGGCCCTGTTTGG 60.678 66.667 13.77 0.00 44.06 3.28
2386 2413 2.846532 CCTGAGGCCCTGTTTGGT 59.153 61.111 0.00 0.00 0.00 3.67
2387 2414 1.153756 CCTGAGGCCCTGTTTGGTT 59.846 57.895 0.00 0.00 0.00 3.67
2388 2415 0.895559 CCTGAGGCCCTGTTTGGTTC 60.896 60.000 0.00 0.00 0.00 3.62
2389 2416 0.178992 CTGAGGCCCTGTTTGGTTCA 60.179 55.000 0.00 0.00 0.00 3.18
2390 2417 0.482446 TGAGGCCCTGTTTGGTTCAT 59.518 50.000 0.00 0.00 0.00 2.57
2391 2418 1.707989 TGAGGCCCTGTTTGGTTCATA 59.292 47.619 0.00 0.00 0.00 2.15
2392 2419 2.109128 TGAGGCCCTGTTTGGTTCATAA 59.891 45.455 0.00 0.00 0.00 1.90
2393 2420 2.755103 GAGGCCCTGTTTGGTTCATAAG 59.245 50.000 0.00 0.00 0.00 1.73
2394 2421 2.110011 AGGCCCTGTTTGGTTCATAAGT 59.890 45.455 0.00 0.00 0.00 2.24
2395 2422 2.492088 GGCCCTGTTTGGTTCATAAGTC 59.508 50.000 0.00 0.00 0.00 3.01
2396 2423 3.421844 GCCCTGTTTGGTTCATAAGTCT 58.578 45.455 0.00 0.00 0.00 3.24
2397 2424 3.826729 GCCCTGTTTGGTTCATAAGTCTT 59.173 43.478 0.00 0.00 0.00 3.01
2398 2425 5.007682 GCCCTGTTTGGTTCATAAGTCTTA 58.992 41.667 0.00 0.00 0.00 2.10
2399 2426 5.123979 GCCCTGTTTGGTTCATAAGTCTTAG 59.876 44.000 0.00 0.00 0.00 2.18
2400 2427 5.648092 CCCTGTTTGGTTCATAAGTCTTAGG 59.352 44.000 0.00 0.00 0.00 2.69
2401 2428 6.472887 CCTGTTTGGTTCATAAGTCTTAGGA 58.527 40.000 2.85 2.85 0.00 2.94
2402 2429 6.371825 CCTGTTTGGTTCATAAGTCTTAGGAC 59.628 42.308 6.47 0.00 42.41 3.85
2434 2461 9.886132 TTAATCCCAACTTATAAGTCTCAAGTC 57.114 33.333 18.28 0.00 38.57 3.01
2435 2462 7.741554 ATCCCAACTTATAAGTCTCAAGTCT 57.258 36.000 18.28 0.00 38.57 3.24
2436 2463 7.171630 TCCCAACTTATAAGTCTCAAGTCTC 57.828 40.000 18.28 0.00 38.57 3.36
2437 2464 6.954684 TCCCAACTTATAAGTCTCAAGTCTCT 59.045 38.462 18.28 0.00 38.57 3.10
2438 2465 8.114102 TCCCAACTTATAAGTCTCAAGTCTCTA 58.886 37.037 18.28 0.00 38.57 2.43
2439 2466 8.750298 CCCAACTTATAAGTCTCAAGTCTCTAA 58.250 37.037 18.28 0.00 38.57 2.10
2447 2474 6.987403 AGTCTCAAGTCTCTAAAAAGTCCT 57.013 37.500 0.00 0.00 0.00 3.85
2448 2475 7.368198 AGTCTCAAGTCTCTAAAAAGTCCTT 57.632 36.000 0.00 0.00 0.00 3.36
2449 2476 8.480133 AGTCTCAAGTCTCTAAAAAGTCCTTA 57.520 34.615 0.00 0.00 0.00 2.69
2450 2477 8.361889 AGTCTCAAGTCTCTAAAAAGTCCTTAC 58.638 37.037 0.00 0.00 0.00 2.34
2451 2478 7.599621 GTCTCAAGTCTCTAAAAAGTCCTTACC 59.400 40.741 0.00 0.00 0.00 2.85
2452 2479 7.509659 TCTCAAGTCTCTAAAAAGTCCTTACCT 59.490 37.037 0.00 0.00 0.00 3.08
2453 2480 7.442656 TCAAGTCTCTAAAAAGTCCTTACCTG 58.557 38.462 0.00 0.00 0.00 4.00
2454 2481 6.997942 AGTCTCTAAAAAGTCCTTACCTGT 57.002 37.500 0.00 0.00 0.00 4.00
2455 2482 7.376335 AGTCTCTAAAAAGTCCTTACCTGTT 57.624 36.000 0.00 0.00 0.00 3.16
2456 2483 7.803131 AGTCTCTAAAAAGTCCTTACCTGTTT 58.197 34.615 0.00 0.00 0.00 2.83
2457 2484 7.715686 AGTCTCTAAAAAGTCCTTACCTGTTTG 59.284 37.037 0.00 0.00 0.00 2.93
2458 2485 6.996282 TCTCTAAAAAGTCCTTACCTGTTTGG 59.004 38.462 0.00 0.00 42.93 3.28
2468 2495 3.036431 CCTGTTTGGTTCCTGGGAC 57.964 57.895 0.00 0.00 0.00 4.46
2469 2496 0.478507 CCTGTTTGGTTCCTGGGACT 59.521 55.000 4.84 0.00 0.00 3.85
2470 2497 1.133482 CCTGTTTGGTTCCTGGGACTT 60.133 52.381 4.84 0.00 0.00 3.01
2471 2498 2.107552 CCTGTTTGGTTCCTGGGACTTA 59.892 50.000 4.84 0.00 0.00 2.24
2472 2499 3.245264 CCTGTTTGGTTCCTGGGACTTAT 60.245 47.826 4.84 0.00 0.00 1.73
2473 2500 4.018779 CCTGTTTGGTTCCTGGGACTTATA 60.019 45.833 4.84 0.00 0.00 0.98
2474 2501 5.515886 CCTGTTTGGTTCCTGGGACTTATAA 60.516 44.000 4.84 0.00 0.00 0.98
2475 2502 5.566469 TGTTTGGTTCCTGGGACTTATAAG 58.434 41.667 11.05 11.05 0.00 1.73
2476 2503 5.073965 TGTTTGGTTCCTGGGACTTATAAGT 59.926 40.000 18.05 18.05 43.16 2.24
2493 2520 9.448587 ACTTATAAGTCCCTATAAGACCACATT 57.551 33.333 12.50 0.00 41.46 2.71
2496 2523 8.792830 ATAAGTCCCTATAAGACCACATTACA 57.207 34.615 0.09 0.00 34.67 2.41
2497 2524 7.504926 AAGTCCCTATAAGACCACATTACAA 57.495 36.000 0.09 0.00 34.67 2.41
2498 2525 6.885922 AGTCCCTATAAGACCACATTACAAC 58.114 40.000 0.09 0.00 34.67 3.32
2499 2526 6.672657 AGTCCCTATAAGACCACATTACAACT 59.327 38.462 0.09 0.00 34.67 3.16
2500 2527 7.842743 AGTCCCTATAAGACCACATTACAACTA 59.157 37.037 0.09 0.00 34.67 2.24
2501 2528 8.648693 GTCCCTATAAGACCACATTACAACTAT 58.351 37.037 0.00 0.00 0.00 2.12
2502 2529 9.886337 TCCCTATAAGACCACATTACAACTATA 57.114 33.333 0.00 0.00 0.00 1.31
2508 2535 8.788325 AAGACCACATTACAACTATAAGTTCC 57.212 34.615 0.00 0.00 36.03 3.62
2509 2536 8.147244 AGACCACATTACAACTATAAGTTCCT 57.853 34.615 0.00 0.00 36.03 3.36
2510 2537 8.041323 AGACCACATTACAACTATAAGTTCCTG 58.959 37.037 0.00 0.00 36.03 3.86
2511 2538 7.686434 ACCACATTACAACTATAAGTTCCTGT 58.314 34.615 0.00 0.00 36.03 4.00
2512 2539 8.818860 ACCACATTACAACTATAAGTTCCTGTA 58.181 33.333 0.00 0.00 36.03 2.74
2513 2540 9.661563 CCACATTACAACTATAAGTTCCTGTAA 57.338 33.333 5.68 5.68 36.03 2.41
2519 2546 8.653036 ACAACTATAAGTTCCTGTAAGACTCT 57.347 34.615 0.00 0.00 36.03 3.24
2520 2547 8.741841 ACAACTATAAGTTCCTGTAAGACTCTC 58.258 37.037 0.00 0.00 36.03 3.20
2521 2548 7.885009 ACTATAAGTTCCTGTAAGACTCTCC 57.115 40.000 0.00 0.00 34.07 3.71
2522 2549 7.645002 ACTATAAGTTCCTGTAAGACTCTCCT 58.355 38.462 0.00 0.00 34.07 3.69
2523 2550 8.117312 ACTATAAGTTCCTGTAAGACTCTCCTT 58.883 37.037 0.00 0.00 34.07 3.36
2524 2551 5.476091 AAGTTCCTGTAAGACTCTCCTTG 57.524 43.478 0.00 0.00 34.07 3.61
2525 2552 4.742012 AGTTCCTGTAAGACTCTCCTTGA 58.258 43.478 0.00 0.00 34.07 3.02
2527 2554 4.659529 TCCTGTAAGACTCTCCTTGAGA 57.340 45.455 0.00 0.00 45.34 3.27
2543 2570 9.261035 TCTCCTTGAGAGTCTTATTTCATAAGT 57.739 33.333 0.00 0.00 43.71 2.24
2544 2571 9.528018 CTCCTTGAGAGTCTTATTTCATAAGTC 57.472 37.037 0.00 0.00 37.60 3.01
2545 2572 8.478877 TCCTTGAGAGTCTTATTTCATAAGTCC 58.521 37.037 0.00 0.00 42.21 3.85
2546 2573 7.713073 CCTTGAGAGTCTTATTTCATAAGTCCC 59.287 40.741 0.00 0.00 42.21 4.46
2547 2574 7.733773 TGAGAGTCTTATTTCATAAGTCCCA 57.266 36.000 0.00 0.00 42.21 4.37
2548 2575 8.146053 TGAGAGTCTTATTTCATAAGTCCCAA 57.854 34.615 0.00 0.00 42.21 4.12
2549 2576 8.602424 TGAGAGTCTTATTTCATAAGTCCCAAA 58.398 33.333 0.00 0.00 42.21 3.28
2550 2577 9.620259 GAGAGTCTTATTTCATAAGTCCCAAAT 57.380 33.333 0.00 0.00 42.21 2.32
2551 2578 9.401058 AGAGTCTTATTTCATAAGTCCCAAATG 57.599 33.333 3.93 0.00 42.21 2.32
2552 2579 8.000780 AGTCTTATTTCATAAGTCCCAAATGC 57.999 34.615 3.93 0.00 42.21 3.56
2553 2580 7.068716 AGTCTTATTTCATAAGTCCCAAATGCC 59.931 37.037 3.93 0.00 42.21 4.40
2554 2581 6.323739 TCTTATTTCATAAGTCCCAAATGCCC 59.676 38.462 3.93 0.00 42.21 5.36
2555 2582 3.464720 TTCATAAGTCCCAAATGCCCA 57.535 42.857 0.00 0.00 0.00 5.36
2556 2583 2.733956 TCATAAGTCCCAAATGCCCAC 58.266 47.619 0.00 0.00 0.00 4.61
2557 2584 2.311542 TCATAAGTCCCAAATGCCCACT 59.688 45.455 0.00 0.00 0.00 4.00
2558 2585 2.990740 TAAGTCCCAAATGCCCACTT 57.009 45.000 0.00 0.00 0.00 3.16
2559 2586 2.101640 AAGTCCCAAATGCCCACTTT 57.898 45.000 0.00 0.00 0.00 2.66
2560 2587 2.990740 AGTCCCAAATGCCCACTTTA 57.009 45.000 0.00 0.00 0.00 1.85
2561 2588 3.252554 AGTCCCAAATGCCCACTTTAA 57.747 42.857 0.00 0.00 0.00 1.52
2562 2589 3.165071 AGTCCCAAATGCCCACTTTAAG 58.835 45.455 0.00 0.00 0.00 1.85
2563 2590 2.897326 GTCCCAAATGCCCACTTTAAGT 59.103 45.455 0.00 0.00 0.00 2.24
2564 2591 3.056821 GTCCCAAATGCCCACTTTAAGTC 60.057 47.826 0.00 0.00 0.00 3.01
2565 2592 3.165071 CCCAAATGCCCACTTTAAGTCT 58.835 45.455 0.00 0.00 0.00 3.24
2566 2593 3.193479 CCCAAATGCCCACTTTAAGTCTC 59.807 47.826 0.00 0.00 0.00 3.36
2567 2594 4.082125 CCAAATGCCCACTTTAAGTCTCT 58.918 43.478 0.00 0.00 0.00 3.10
2568 2595 5.253330 CCAAATGCCCACTTTAAGTCTCTA 58.747 41.667 0.00 0.00 0.00 2.43
2569 2596 5.888161 CCAAATGCCCACTTTAAGTCTCTAT 59.112 40.000 0.00 0.00 0.00 1.98
2570 2597 7.054124 CCAAATGCCCACTTTAAGTCTCTATA 58.946 38.462 0.00 0.00 0.00 1.31
2571 2598 7.556275 CCAAATGCCCACTTTAAGTCTCTATAA 59.444 37.037 0.00 0.00 0.00 0.98
2572 2599 8.616076 CAAATGCCCACTTTAAGTCTCTATAAG 58.384 37.037 0.00 0.00 0.00 1.73
2573 2600 6.869206 TGCCCACTTTAAGTCTCTATAAGT 57.131 37.500 0.00 0.00 0.00 2.24
2574 2601 6.875076 TGCCCACTTTAAGTCTCTATAAGTC 58.125 40.000 0.00 0.00 0.00 3.01
2575 2602 6.127140 TGCCCACTTTAAGTCTCTATAAGTCC 60.127 42.308 0.00 0.00 0.00 3.85
2576 2603 6.685873 GCCCACTTTAAGTCTCTATAAGTCCC 60.686 46.154 0.00 0.00 0.00 4.46
2577 2604 6.612049 CCCACTTTAAGTCTCTATAAGTCCCT 59.388 42.308 0.00 0.00 0.00 4.20
2578 2605 7.201929 CCCACTTTAAGTCTCTATAAGTCCCTC 60.202 44.444 0.00 0.00 0.00 4.30
2579 2606 7.201929 CCACTTTAAGTCTCTATAAGTCCCTCC 60.202 44.444 0.00 0.00 0.00 4.30
2580 2607 7.562088 CACTTTAAGTCTCTATAAGTCCCTCCT 59.438 40.741 0.00 0.00 0.00 3.69
2581 2608 7.562088 ACTTTAAGTCTCTATAAGTCCCTCCTG 59.438 40.741 0.00 0.00 0.00 3.86
2582 2609 5.475398 AAGTCTCTATAAGTCCCTCCTGT 57.525 43.478 0.00 0.00 0.00 4.00
2583 2610 5.475398 AGTCTCTATAAGTCCCTCCTGTT 57.525 43.478 0.00 0.00 0.00 3.16
2584 2611 5.844601 AGTCTCTATAAGTCCCTCCTGTTT 58.155 41.667 0.00 0.00 0.00 2.83
2585 2612 6.982899 AGTCTCTATAAGTCCCTCCTGTTTA 58.017 40.000 0.00 0.00 0.00 2.01
2586 2613 7.064229 AGTCTCTATAAGTCCCTCCTGTTTAG 58.936 42.308 0.00 0.00 0.00 1.85
2587 2614 6.834969 GTCTCTATAAGTCCCTCCTGTTTAGT 59.165 42.308 0.00 0.00 0.00 2.24
2588 2615 7.342541 GTCTCTATAAGTCCCTCCTGTTTAGTT 59.657 40.741 0.00 0.00 0.00 2.24
2589 2616 7.899709 TCTCTATAAGTCCCTCCTGTTTAGTTT 59.100 37.037 0.00 0.00 0.00 2.66
2590 2617 9.198475 CTCTATAAGTCCCTCCTGTTTAGTTTA 57.802 37.037 0.00 0.00 0.00 2.01
2591 2618 9.198475 TCTATAAGTCCCTCCTGTTTAGTTTAG 57.802 37.037 0.00 0.00 0.00 1.85
2592 2619 9.198475 CTATAAGTCCCTCCTGTTTAGTTTAGA 57.802 37.037 0.00 0.00 0.00 2.10
2593 2620 6.954352 AAGTCCCTCCTGTTTAGTTTAGAT 57.046 37.500 0.00 0.00 0.00 1.98
2594 2621 6.301169 AGTCCCTCCTGTTTAGTTTAGATG 57.699 41.667 0.00 0.00 0.00 2.90
2595 2622 5.785940 AGTCCCTCCTGTTTAGTTTAGATGT 59.214 40.000 0.00 0.00 0.00 3.06
2596 2623 5.875359 GTCCCTCCTGTTTAGTTTAGATGTG 59.125 44.000 0.00 0.00 0.00 3.21
2597 2624 5.783360 TCCCTCCTGTTTAGTTTAGATGTGA 59.217 40.000 0.00 0.00 0.00 3.58
2598 2625 5.875359 CCCTCCTGTTTAGTTTAGATGTGAC 59.125 44.000 0.00 0.00 0.00 3.67
2599 2626 6.295916 CCCTCCTGTTTAGTTTAGATGTGACT 60.296 42.308 0.00 0.00 0.00 3.41
2600 2627 7.162082 CCTCCTGTTTAGTTTAGATGTGACTT 58.838 38.462 0.00 0.00 0.00 3.01
2601 2628 8.311836 CCTCCTGTTTAGTTTAGATGTGACTTA 58.688 37.037 0.00 0.00 0.00 2.24
2602 2629 9.877178 CTCCTGTTTAGTTTAGATGTGACTTAT 57.123 33.333 0.00 0.00 0.00 1.73
2609 2636 9.710818 TTAGTTTAGATGTGACTTATAGGGACT 57.289 33.333 0.00 0.00 46.37 3.85
2610 2637 8.611051 AGTTTAGATGTGACTTATAGGGACTT 57.389 34.615 0.00 0.00 41.75 3.01
2611 2638 9.047947 AGTTTAGATGTGACTTATAGGGACTTT 57.952 33.333 0.00 0.00 41.75 2.66
2612 2639 9.668497 GTTTAGATGTGACTTATAGGGACTTTT 57.332 33.333 0.00 0.00 41.75 2.27
2636 2663 8.640063 TTTTAAGTCCCTAAACCAATAAGTCC 57.360 34.615 0.00 0.00 0.00 3.85
2637 2664 5.853572 AAGTCCCTAAACCAATAAGTCCA 57.146 39.130 0.00 0.00 0.00 4.02
2638 2665 6.402981 AAGTCCCTAAACCAATAAGTCCAT 57.597 37.500 0.00 0.00 0.00 3.41
2639 2666 5.755849 AGTCCCTAAACCAATAAGTCCATG 58.244 41.667 0.00 0.00 0.00 3.66
2640 2667 4.887655 GTCCCTAAACCAATAAGTCCATGG 59.112 45.833 4.97 4.97 40.16 3.66
2641 2668 4.791334 TCCCTAAACCAATAAGTCCATGGA 59.209 41.667 11.44 11.44 37.66 3.41
2642 2669 5.254267 TCCCTAAACCAATAAGTCCATGGAA 59.746 40.000 18.20 0.37 37.66 3.53
2643 2670 5.955355 CCCTAAACCAATAAGTCCATGGAAA 59.045 40.000 18.20 5.51 37.66 3.13
2644 2671 6.127451 CCCTAAACCAATAAGTCCATGGAAAC 60.127 42.308 18.20 5.62 37.66 2.78
2739 2766 5.221441 GGGTTCTTTGCAAACTTTCCTACAT 60.221 40.000 8.05 0.00 0.00 2.29
2750 2777 7.550906 GCAAACTTTCCTACATAGTTCATCTCT 59.449 37.037 0.00 0.00 31.26 3.10
2751 2778 8.877779 CAAACTTTCCTACATAGTTCATCTCTG 58.122 37.037 0.00 0.00 31.26 3.35
2752 2779 6.578023 ACTTTCCTACATAGTTCATCTCTGC 58.422 40.000 0.00 0.00 0.00 4.26
2753 2780 4.837896 TCCTACATAGTTCATCTCTGCG 57.162 45.455 0.00 0.00 0.00 5.18
2754 2781 3.570125 TCCTACATAGTTCATCTCTGCGG 59.430 47.826 0.00 0.00 0.00 5.69
2779 2811 6.575942 GTGTATTTACCAAAAGCAACTGTACG 59.424 38.462 0.00 0.00 0.00 3.67
2780 2812 6.482641 TGTATTTACCAAAAGCAACTGTACGA 59.517 34.615 0.00 0.00 0.00 3.43
2781 2813 4.799419 TTACCAAAAGCAACTGTACGAC 57.201 40.909 0.00 0.00 0.00 4.34
2782 2814 2.914059 ACCAAAAGCAACTGTACGACT 58.086 42.857 0.00 0.00 0.00 4.18
2783 2815 2.612212 ACCAAAAGCAACTGTACGACTG 59.388 45.455 0.00 0.00 0.00 3.51
2784 2816 2.612212 CCAAAAGCAACTGTACGACTGT 59.388 45.455 0.00 0.00 0.00 3.55
2785 2817 3.805422 CCAAAAGCAACTGTACGACTGTA 59.195 43.478 0.00 0.00 29.85 2.74
2826 2858 2.104281 ACCCAGCGATATTGTTAGTCCC 59.896 50.000 0.00 0.00 0.00 4.46
2827 2859 2.550208 CCCAGCGATATTGTTAGTCCCC 60.550 54.545 0.00 0.00 0.00 4.81
2845 2877 2.369394 CCCAAAACAGTATCCTCTGGC 58.631 52.381 0.00 0.00 39.48 4.85
2848 2880 3.074412 CAAAACAGTATCCTCTGGCGTT 58.926 45.455 0.00 0.00 39.48 4.84
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
4 5 3.567797 GTGATCTTCAGCGGCCGC 61.568 66.667 42.34 42.34 42.33 6.53
5 6 2.892425 GGTGATCTTCAGCGGCCG 60.892 66.667 24.05 24.05 35.04 6.13
6 7 2.514824 GGGTGATCTTCAGCGGCC 60.515 66.667 0.00 0.00 45.17 6.13
7 8 1.817099 CAGGGTGATCTTCAGCGGC 60.817 63.158 0.00 0.00 45.17 6.53
8 9 1.153289 CCAGGGTGATCTTCAGCGG 60.153 63.158 0.00 0.00 45.17 5.52
9 10 1.817099 GCCAGGGTGATCTTCAGCG 60.817 63.158 0.00 0.00 45.17 5.18
10 11 1.452833 GGCCAGGGTGATCTTCAGC 60.453 63.158 0.00 0.00 43.63 4.26
11 12 0.179936 GAGGCCAGGGTGATCTTCAG 59.820 60.000 5.01 0.00 0.00 3.02
12 13 1.274703 GGAGGCCAGGGTGATCTTCA 61.275 60.000 5.01 0.00 0.00 3.02
13 14 0.985490 AGGAGGCCAGGGTGATCTTC 60.985 60.000 5.01 0.00 0.00 2.87
14 15 0.343372 TAGGAGGCCAGGGTGATCTT 59.657 55.000 5.01 0.00 0.00 2.40
15 16 0.105246 CTAGGAGGCCAGGGTGATCT 60.105 60.000 5.01 0.00 0.00 2.75
16 17 0.399233 ACTAGGAGGCCAGGGTGATC 60.399 60.000 5.01 0.00 0.00 2.92
17 18 0.941963 TACTAGGAGGCCAGGGTGAT 59.058 55.000 5.01 0.00 0.00 3.06
18 19 0.032416 GTACTAGGAGGCCAGGGTGA 60.032 60.000 5.01 0.00 0.00 4.02
19 20 0.325296 TGTACTAGGAGGCCAGGGTG 60.325 60.000 5.01 0.00 0.00 4.61
20 21 0.032017 CTGTACTAGGAGGCCAGGGT 60.032 60.000 5.01 0.00 0.00 4.34
21 22 2.827715 CTGTACTAGGAGGCCAGGG 58.172 63.158 5.01 0.00 0.00 4.45
31 32 4.844420 GCCTGCTGCCTGTACTAG 57.156 61.111 0.00 0.00 0.00 2.57
40 41 3.207669 CTTCGATGGGCCTGCTGC 61.208 66.667 4.53 0.00 40.16 5.25
41 42 3.207669 GCTTCGATGGGCCTGCTG 61.208 66.667 4.53 0.00 0.00 4.41
42 43 4.845580 CGCTTCGATGGGCCTGCT 62.846 66.667 4.53 0.00 0.00 4.24
44 45 4.161295 TCCGCTTCGATGGGCCTG 62.161 66.667 4.53 0.00 0.00 4.85
45 46 3.854669 CTCCGCTTCGATGGGCCT 61.855 66.667 4.53 0.00 0.00 5.19
46 47 3.849951 TCTCCGCTTCGATGGGCC 61.850 66.667 9.56 0.00 0.00 5.80
47 48 2.586357 GTCTCCGCTTCGATGGGC 60.586 66.667 9.56 3.07 0.00 5.36
48 49 2.278857 CGTCTCCGCTTCGATGGG 60.279 66.667 8.23 8.23 0.00 4.00
49 50 1.298713 CTCGTCTCCGCTTCGATGG 60.299 63.158 0.00 0.00 33.26 3.51
50 51 1.298713 CCTCGTCTCCGCTTCGATG 60.299 63.158 0.00 0.00 33.26 3.84
51 52 2.482333 CCCTCGTCTCCGCTTCGAT 61.482 63.158 0.00 0.00 33.26 3.59
52 53 3.132139 CCCTCGTCTCCGCTTCGA 61.132 66.667 0.00 0.00 0.00 3.71
53 54 4.856607 GCCCTCGTCTCCGCTTCG 62.857 72.222 0.00 0.00 0.00 3.79
54 55 3.708220 CTGCCCTCGTCTCCGCTTC 62.708 68.421 0.00 0.00 0.00 3.86
55 56 3.764466 CTGCCCTCGTCTCCGCTT 61.764 66.667 0.00 0.00 0.00 4.68
58 59 4.504916 CTGCTGCCCTCGTCTCCG 62.505 72.222 0.00 0.00 0.00 4.63
59 60 4.154347 CCTGCTGCCCTCGTCTCC 62.154 72.222 0.00 0.00 0.00 3.71
60 61 4.828925 GCCTGCTGCCCTCGTCTC 62.829 72.222 0.00 0.00 0.00 3.36
68 69 3.741476 CAAAGGTCGCCTGCTGCC 61.741 66.667 0.00 0.00 36.24 4.85
69 70 2.669569 TCAAAGGTCGCCTGCTGC 60.670 61.111 0.00 0.00 32.13 5.25
70 71 1.302033 ACTCAAAGGTCGCCTGCTG 60.302 57.895 0.00 1.58 32.13 4.41
71 72 1.302033 CACTCAAAGGTCGCCTGCT 60.302 57.895 0.00 0.00 32.13 4.24
72 73 1.598130 ACACTCAAAGGTCGCCTGC 60.598 57.895 0.00 0.00 32.13 4.85
73 74 0.249868 TCACACTCAAAGGTCGCCTG 60.250 55.000 0.00 0.00 32.13 4.85
74 75 0.034059 CTCACACTCAAAGGTCGCCT 59.966 55.000 0.00 0.00 33.87 5.52
75 76 0.951040 CCTCACACTCAAAGGTCGCC 60.951 60.000 0.00 0.00 0.00 5.54
76 77 1.569479 GCCTCACACTCAAAGGTCGC 61.569 60.000 0.00 0.00 32.49 5.19
77 78 1.284982 CGCCTCACACTCAAAGGTCG 61.285 60.000 0.00 0.00 32.49 4.79
78 79 0.951040 CCGCCTCACACTCAAAGGTC 60.951 60.000 0.00 0.00 32.49 3.85
79 80 1.071471 CCGCCTCACACTCAAAGGT 59.929 57.895 0.00 0.00 32.49 3.50
80 81 1.672356 CCCGCCTCACACTCAAAGG 60.672 63.158 0.00 0.00 0.00 3.11
81 82 2.328099 GCCCGCCTCACACTCAAAG 61.328 63.158 0.00 0.00 0.00 2.77
82 83 2.281484 GCCCGCCTCACACTCAAA 60.281 61.111 0.00 0.00 0.00 2.69
83 84 4.680237 CGCCCGCCTCACACTCAA 62.680 66.667 0.00 0.00 0.00 3.02
106 107 1.152383 GCTAGAAATCCACGGTCGCC 61.152 60.000 0.00 0.00 0.00 5.54
107 108 0.459585 TGCTAGAAATCCACGGTCGC 60.460 55.000 0.00 0.00 0.00 5.19
108 109 1.278238 GTGCTAGAAATCCACGGTCG 58.722 55.000 0.00 0.00 0.00 4.79
109 110 1.653151 GGTGCTAGAAATCCACGGTC 58.347 55.000 0.00 0.00 0.00 4.79
110 111 0.108329 CGGTGCTAGAAATCCACGGT 60.108 55.000 0.00 0.00 0.00 4.83
111 112 0.810031 CCGGTGCTAGAAATCCACGG 60.810 60.000 0.00 0.00 0.00 4.94
112 113 0.810031 CCCGGTGCTAGAAATCCACG 60.810 60.000 0.00 0.00 0.00 4.94
113 114 0.463833 CCCCGGTGCTAGAAATCCAC 60.464 60.000 0.00 0.00 0.00 4.02
114 115 1.632018 CCCCCGGTGCTAGAAATCCA 61.632 60.000 0.00 0.00 0.00 3.41
115 116 1.148498 CCCCCGGTGCTAGAAATCC 59.852 63.158 0.00 0.00 0.00 3.01
116 117 1.912971 ACCCCCGGTGCTAGAAATC 59.087 57.895 0.00 0.00 32.98 2.17
117 118 4.164264 ACCCCCGGTGCTAGAAAT 57.836 55.556 0.00 0.00 32.98 2.17
127 128 4.778143 CTTTCTCGCCACCCCCGG 62.778 72.222 0.00 0.00 0.00 5.73
128 129 3.665675 CTCTTTCTCGCCACCCCCG 62.666 68.421 0.00 0.00 0.00 5.73
129 130 2.269241 CTCTTTCTCGCCACCCCC 59.731 66.667 0.00 0.00 0.00 5.40
130 131 2.269241 CCTCTTTCTCGCCACCCC 59.731 66.667 0.00 0.00 0.00 4.95
131 132 2.436824 GCCTCTTTCTCGCCACCC 60.437 66.667 0.00 0.00 0.00 4.61
132 133 1.302511 TTGCCTCTTTCTCGCCACC 60.303 57.895 0.00 0.00 0.00 4.61
133 134 0.884704 TGTTGCCTCTTTCTCGCCAC 60.885 55.000 0.00 0.00 0.00 5.01
134 135 0.179032 TTGTTGCCTCTTTCTCGCCA 60.179 50.000 0.00 0.00 0.00 5.69
135 136 0.951558 TTTGTTGCCTCTTTCTCGCC 59.048 50.000 0.00 0.00 0.00 5.54
136 137 1.660333 CGTTTGTTGCCTCTTTCTCGC 60.660 52.381 0.00 0.00 0.00 5.03
137 138 1.660333 GCGTTTGTTGCCTCTTTCTCG 60.660 52.381 0.00 0.00 0.00 4.04
138 139 1.660333 CGCGTTTGTTGCCTCTTTCTC 60.660 52.381 0.00 0.00 0.00 2.87
139 140 0.307760 CGCGTTTGTTGCCTCTTTCT 59.692 50.000 0.00 0.00 0.00 2.52
140 141 0.306533 TCGCGTTTGTTGCCTCTTTC 59.693 50.000 5.77 0.00 0.00 2.62
141 142 0.028902 GTCGCGTTTGTTGCCTCTTT 59.971 50.000 5.77 0.00 0.00 2.52
142 143 1.092921 TGTCGCGTTTGTTGCCTCTT 61.093 50.000 5.77 0.00 0.00 2.85
143 144 1.092921 TTGTCGCGTTTGTTGCCTCT 61.093 50.000 5.77 0.00 0.00 3.69
144 145 0.248296 TTTGTCGCGTTTGTTGCCTC 60.248 50.000 5.77 0.00 0.00 4.70
145 146 0.171455 TTTTGTCGCGTTTGTTGCCT 59.829 45.000 5.77 0.00 0.00 4.75
146 147 0.992802 TTTTTGTCGCGTTTGTTGCC 59.007 45.000 5.77 0.00 0.00 4.52
147 148 1.651631 AGTTTTTGTCGCGTTTGTTGC 59.348 42.857 5.77 0.00 0.00 4.17
148 149 2.277834 GGAGTTTTTGTCGCGTTTGTTG 59.722 45.455 5.77 0.00 0.00 3.33
149 150 2.162809 AGGAGTTTTTGTCGCGTTTGTT 59.837 40.909 5.77 0.00 0.00 2.83
150 151 1.741145 AGGAGTTTTTGTCGCGTTTGT 59.259 42.857 5.77 0.00 0.00 2.83
151 152 2.372350 GAGGAGTTTTTGTCGCGTTTG 58.628 47.619 5.77 0.00 0.00 2.93
152 153 1.332686 GGAGGAGTTTTTGTCGCGTTT 59.667 47.619 5.77 0.00 0.00 3.60
153 154 0.942252 GGAGGAGTTTTTGTCGCGTT 59.058 50.000 5.77 0.00 0.00 4.84
154 155 1.219522 CGGAGGAGTTTTTGTCGCGT 61.220 55.000 5.77 0.00 0.00 6.01
155 156 0.942410 TCGGAGGAGTTTTTGTCGCG 60.942 55.000 0.00 0.00 0.00 5.87
156 157 1.194772 CTTCGGAGGAGTTTTTGTCGC 59.805 52.381 0.00 0.00 0.00 5.19
157 158 1.194772 GCTTCGGAGGAGTTTTTGTCG 59.805 52.381 0.00 0.00 0.00 4.35
158 159 2.218603 TGCTTCGGAGGAGTTTTTGTC 58.781 47.619 0.00 0.00 0.00 3.18
159 160 2.222027 CTGCTTCGGAGGAGTTTTTGT 58.778 47.619 3.61 0.00 36.66 2.83
160 161 1.068954 GCTGCTTCGGAGGAGTTTTTG 60.069 52.381 14.38 0.00 42.77 2.44
161 162 1.239347 GCTGCTTCGGAGGAGTTTTT 58.761 50.000 14.38 0.00 42.77 1.94
162 163 0.951040 CGCTGCTTCGGAGGAGTTTT 60.951 55.000 14.38 0.00 42.77 2.43
163 164 1.374758 CGCTGCTTCGGAGGAGTTT 60.375 57.895 14.38 0.00 42.77 2.66
164 165 2.262915 CGCTGCTTCGGAGGAGTT 59.737 61.111 14.38 0.00 42.77 3.01
184 185 4.265056 ACACACTTCCCCACCCGC 62.265 66.667 0.00 0.00 0.00 6.13
185 186 2.281484 CACACACTTCCCCACCCG 60.281 66.667 0.00 0.00 0.00 5.28
186 187 1.789576 ATCCACACACTTCCCCACCC 61.790 60.000 0.00 0.00 0.00 4.61
187 188 0.609131 CATCCACACACTTCCCCACC 60.609 60.000 0.00 0.00 0.00 4.61
188 189 1.244019 GCATCCACACACTTCCCCAC 61.244 60.000 0.00 0.00 0.00 4.61
189 190 1.074775 GCATCCACACACTTCCCCA 59.925 57.895 0.00 0.00 0.00 4.96
190 191 2.040544 CGCATCCACACACTTCCCC 61.041 63.158 0.00 0.00 0.00 4.81
191 192 2.040544 CCGCATCCACACACTTCCC 61.041 63.158 0.00 0.00 0.00 3.97
192 193 2.040544 CCCGCATCCACACACTTCC 61.041 63.158 0.00 0.00 0.00 3.46
193 194 0.889186 AACCCGCATCCACACACTTC 60.889 55.000 0.00 0.00 0.00 3.01
194 195 0.467290 AAACCCGCATCCACACACTT 60.467 50.000 0.00 0.00 0.00 3.16
195 196 0.398696 TAAACCCGCATCCACACACT 59.601 50.000 0.00 0.00 0.00 3.55
196 197 0.802494 CTAAACCCGCATCCACACAC 59.198 55.000 0.00 0.00 0.00 3.82
197 198 0.322098 CCTAAACCCGCATCCACACA 60.322 55.000 0.00 0.00 0.00 3.72
198 199 1.029947 CCCTAAACCCGCATCCACAC 61.030 60.000 0.00 0.00 0.00 3.82
199 200 1.301623 CCCTAAACCCGCATCCACA 59.698 57.895 0.00 0.00 0.00 4.17
200 201 0.323087 AACCCTAAACCCGCATCCAC 60.323 55.000 0.00 0.00 0.00 4.02
201 202 0.406361 AAACCCTAAACCCGCATCCA 59.594 50.000 0.00 0.00 0.00 3.41
202 203 2.019249 GTAAACCCTAAACCCGCATCC 58.981 52.381 0.00 0.00 0.00 3.51
203 204 2.713877 TGTAAACCCTAAACCCGCATC 58.286 47.619 0.00 0.00 0.00 3.91
204 205 2.883122 TGTAAACCCTAAACCCGCAT 57.117 45.000 0.00 0.00 0.00 4.73
205 206 2.622470 GTTTGTAAACCCTAAACCCGCA 59.378 45.455 0.00 0.00 32.82 5.69
206 207 2.350676 CGTTTGTAAACCCTAAACCCGC 60.351 50.000 2.19 0.00 35.51 6.13
207 208 2.350676 GCGTTTGTAAACCCTAAACCCG 60.351 50.000 2.19 0.00 35.51 5.28
208 209 2.030007 GGCGTTTGTAAACCCTAAACCC 60.030 50.000 2.19 0.00 35.51 4.11
209 210 2.350676 CGGCGTTTGTAAACCCTAAACC 60.351 50.000 0.00 0.00 35.51 3.27
210 211 2.350676 CCGGCGTTTGTAAACCCTAAAC 60.351 50.000 6.01 0.00 35.51 2.01
211 212 1.878734 CCGGCGTTTGTAAACCCTAAA 59.121 47.619 6.01 0.00 35.51 1.85
212 213 1.521580 CCGGCGTTTGTAAACCCTAA 58.478 50.000 6.01 0.00 35.51 2.69
213 214 0.954938 GCCGGCGTTTGTAAACCCTA 60.955 55.000 12.58 0.00 35.51 3.53
214 215 2.263021 GCCGGCGTTTGTAAACCCT 61.263 57.895 12.58 0.00 35.51 4.34
215 216 0.954938 TAGCCGGCGTTTGTAAACCC 60.955 55.000 23.20 4.08 35.51 4.11
216 217 0.445043 CTAGCCGGCGTTTGTAAACC 59.555 55.000 23.20 0.00 35.51 3.27
217 218 1.431496 TCTAGCCGGCGTTTGTAAAC 58.569 50.000 23.20 0.00 35.59 2.01
218 219 1.799994 GTTCTAGCCGGCGTTTGTAAA 59.200 47.619 23.20 7.06 0.00 2.01
219 220 1.001181 AGTTCTAGCCGGCGTTTGTAA 59.999 47.619 23.20 8.18 0.00 2.41
220 221 0.604578 AGTTCTAGCCGGCGTTTGTA 59.395 50.000 23.20 6.47 0.00 2.41
221 222 0.669625 GAGTTCTAGCCGGCGTTTGT 60.670 55.000 23.20 5.39 0.00 2.83
222 223 1.359459 GGAGTTCTAGCCGGCGTTTG 61.359 60.000 23.20 12.60 0.00 2.93
223 224 1.079336 GGAGTTCTAGCCGGCGTTT 60.079 57.895 23.20 6.30 0.00 3.60
224 225 1.946475 GAGGAGTTCTAGCCGGCGTT 61.946 60.000 23.20 7.21 0.00 4.84
225 226 2.362632 AGGAGTTCTAGCCGGCGT 60.363 61.111 23.20 12.38 0.00 5.68
226 227 2.413765 GAGGAGTTCTAGCCGGCG 59.586 66.667 23.20 8.11 0.00 6.46
227 228 2.816012 GGAGGAGTTCTAGCCGGC 59.184 66.667 21.89 21.89 0.00 6.13
228 229 1.035932 TTCGGAGGAGTTCTAGCCGG 61.036 60.000 0.00 0.00 42.10 6.13
229 230 0.382515 CTTCGGAGGAGTTCTAGCCG 59.617 60.000 0.00 0.00 43.11 5.52
230 231 1.135333 CACTTCGGAGGAGTTCTAGCC 59.865 57.143 0.00 0.00 0.00 3.93
231 232 1.135333 CCACTTCGGAGGAGTTCTAGC 59.865 57.143 0.00 0.00 36.56 3.42
232 233 1.135333 GCCACTTCGGAGGAGTTCTAG 59.865 57.143 0.00 0.00 36.56 2.43
233 234 1.183549 GCCACTTCGGAGGAGTTCTA 58.816 55.000 0.00 0.00 36.56 2.10
234 235 1.878656 CGCCACTTCGGAGGAGTTCT 61.879 60.000 0.00 0.00 36.56 3.01
235 236 1.446272 CGCCACTTCGGAGGAGTTC 60.446 63.158 0.00 0.00 36.56 3.01
236 237 1.258445 ATCGCCACTTCGGAGGAGTT 61.258 55.000 0.00 0.00 36.56 3.01
237 238 1.682684 ATCGCCACTTCGGAGGAGT 60.683 57.895 0.00 0.00 36.56 3.85
238 239 1.227089 CATCGCCACTTCGGAGGAG 60.227 63.158 0.00 0.00 36.56 3.69
239 240 2.892640 CATCGCCACTTCGGAGGA 59.107 61.111 0.00 0.00 36.56 3.71
240 241 2.892425 GCATCGCCACTTCGGAGG 60.892 66.667 0.00 0.00 36.56 4.30
241 242 3.257561 CGCATCGCCACTTCGGAG 61.258 66.667 0.00 0.00 36.56 4.63
242 243 4.812476 CCGCATCGCCACTTCGGA 62.812 66.667 0.00 0.00 42.43 4.55
245 246 3.869272 CAGCCGCATCGCCACTTC 61.869 66.667 0.00 0.00 0.00 3.01
252 253 4.457496 ACTCCACCAGCCGCATCG 62.457 66.667 0.00 0.00 0.00 3.84
253 254 2.821366 CACTCCACCAGCCGCATC 60.821 66.667 0.00 0.00 0.00 3.91
254 255 3.640407 ACACTCCACCAGCCGCAT 61.640 61.111 0.00 0.00 0.00 4.73
255 256 4.624364 CACACTCCACCAGCCGCA 62.624 66.667 0.00 0.00 0.00 5.69
256 257 4.626081 ACACACTCCACCAGCCGC 62.626 66.667 0.00 0.00 0.00 6.53
257 258 2.658679 TTCACACACTCCACCAGCCG 62.659 60.000 0.00 0.00 0.00 5.52
258 259 1.148273 TTCACACACTCCACCAGCC 59.852 57.895 0.00 0.00 0.00 4.85
259 260 1.498865 CGTTCACACACTCCACCAGC 61.499 60.000 0.00 0.00 0.00 4.85
260 261 1.498865 GCGTTCACACACTCCACCAG 61.499 60.000 0.00 0.00 0.00 4.00
261 262 1.522806 GCGTTCACACACTCCACCA 60.523 57.895 0.00 0.00 0.00 4.17
262 263 2.594962 CGCGTTCACACACTCCACC 61.595 63.158 0.00 0.00 0.00 4.61
263 264 0.595567 TACGCGTTCACACACTCCAC 60.596 55.000 20.78 0.00 0.00 4.02
264 265 0.595567 GTACGCGTTCACACACTCCA 60.596 55.000 20.78 0.00 0.00 3.86
265 266 1.602877 CGTACGCGTTCACACACTCC 61.603 60.000 20.78 0.00 0.00 3.85
266 267 1.602877 CCGTACGCGTTCACACACTC 61.603 60.000 20.78 0.00 36.15 3.51
267 268 1.659335 CCGTACGCGTTCACACACT 60.659 57.895 20.78 0.00 36.15 3.55
268 269 2.651137 CCCGTACGCGTTCACACAC 61.651 63.158 20.78 7.40 36.15 3.82
269 270 2.354891 CCCGTACGCGTTCACACA 60.355 61.111 20.78 0.00 36.15 3.72
270 271 2.355009 ACCCGTACGCGTTCACAC 60.355 61.111 20.78 8.73 36.15 3.82
271 272 2.050168 GACCCGTACGCGTTCACA 60.050 61.111 20.78 0.00 36.15 3.58
272 273 2.050168 TGACCCGTACGCGTTCAC 60.050 61.111 20.78 10.07 36.15 3.18
273 274 2.050168 GTGACCCGTACGCGTTCA 60.050 61.111 20.78 12.46 36.15 3.18
274 275 2.806621 GGTGACCCGTACGCGTTC 60.807 66.667 20.78 12.48 36.15 3.95
291 292 4.760047 CCCTTGGCCCGTCAGTCG 62.760 72.222 0.00 0.00 39.52 4.18
292 293 4.410400 CCCCTTGGCCCGTCAGTC 62.410 72.222 0.00 0.00 0.00 3.51
293 294 4.974438 TCCCCTTGGCCCGTCAGT 62.974 66.667 0.00 0.00 0.00 3.41
294 295 4.101448 CTCCCCTTGGCCCGTCAG 62.101 72.222 0.00 0.00 0.00 3.51
295 296 4.649705 TCTCCCCTTGGCCCGTCA 62.650 66.667 0.00 0.00 0.00 4.35
296 297 3.327404 TTCTCCCCTTGGCCCGTC 61.327 66.667 0.00 0.00 0.00 4.79
297 298 3.647771 GTTCTCCCCTTGGCCCGT 61.648 66.667 0.00 0.00 0.00 5.28
298 299 3.628646 CTGTTCTCCCCTTGGCCCG 62.629 68.421 0.00 0.00 0.00 6.13
299 300 2.356667 CTGTTCTCCCCTTGGCCC 59.643 66.667 0.00 0.00 0.00 5.80
300 301 1.789576 TTCCTGTTCTCCCCTTGGCC 61.790 60.000 0.00 0.00 0.00 5.36
301 302 0.322906 CTTCCTGTTCTCCCCTTGGC 60.323 60.000 0.00 0.00 0.00 4.52
302 303 1.362224 TCTTCCTGTTCTCCCCTTGG 58.638 55.000 0.00 0.00 0.00 3.61
303 304 2.784347 GTTCTTCCTGTTCTCCCCTTG 58.216 52.381 0.00 0.00 0.00 3.61
304 305 1.348036 CGTTCTTCCTGTTCTCCCCTT 59.652 52.381 0.00 0.00 0.00 3.95
305 306 0.977395 CGTTCTTCCTGTTCTCCCCT 59.023 55.000 0.00 0.00 0.00 4.79
306 307 0.673956 GCGTTCTTCCTGTTCTCCCC 60.674 60.000 0.00 0.00 0.00 4.81
307 308 0.673956 GGCGTTCTTCCTGTTCTCCC 60.674 60.000 0.00 0.00 0.00 4.30
308 309 0.673956 GGGCGTTCTTCCTGTTCTCC 60.674 60.000 0.00 0.00 0.00 3.71
309 310 1.014564 CGGGCGTTCTTCCTGTTCTC 61.015 60.000 0.00 0.00 0.00 2.87
310 311 1.004918 CGGGCGTTCTTCCTGTTCT 60.005 57.895 0.00 0.00 0.00 3.01
311 312 1.301479 ACGGGCGTTCTTCCTGTTC 60.301 57.895 0.00 0.00 40.13 3.18
312 313 1.597027 CACGGGCGTTCTTCCTGTT 60.597 57.895 0.00 0.00 41.06 3.16
313 314 2.030562 CACGGGCGTTCTTCCTGT 59.969 61.111 0.00 0.00 43.67 4.00
314 315 3.423154 GCACGGGCGTTCTTCCTG 61.423 66.667 0.00 0.00 36.07 3.86
315 316 3.936203 TGCACGGGCGTTCTTCCT 61.936 61.111 4.58 0.00 45.35 3.36
316 317 3.723348 GTGCACGGGCGTTCTTCC 61.723 66.667 4.58 0.00 45.35 3.46
317 318 4.072088 CGTGCACGGGCGTTCTTC 62.072 66.667 31.15 0.00 45.35 2.87
318 319 4.903010 ACGTGCACGGGCGTTCTT 62.903 61.111 39.21 16.26 45.35 2.52
319 320 4.903010 AACGTGCACGGGCGTTCT 62.903 61.111 39.21 17.03 46.53 3.01
327 328 1.154672 CATGAACCGAACGTGCACG 60.155 57.895 35.99 35.99 46.33 5.34
328 329 0.110823 GACATGAACCGAACGTGCAC 60.111 55.000 6.82 6.82 30.58 4.57
329 330 1.225376 GGACATGAACCGAACGTGCA 61.225 55.000 0.00 0.00 33.20 4.57
330 331 1.495951 GGACATGAACCGAACGTGC 59.504 57.895 0.00 0.00 0.00 5.34
338 339 2.033448 TGGGCACGGACATGAACC 59.967 61.111 0.00 1.31 0.00 3.62
339 340 3.263941 GTGGGCACGGACATGAAC 58.736 61.111 0.00 0.00 0.00 3.18
358 359 0.037419 CCAAATTCGGGCAGGGTTTG 60.037 55.000 8.02 8.02 0.00 2.93
359 360 1.191489 CCCAAATTCGGGCAGGGTTT 61.191 55.000 0.00 0.00 40.07 3.27
360 361 1.609210 CCCAAATTCGGGCAGGGTT 60.609 57.895 0.00 0.00 40.07 4.11
361 362 2.037208 CCCAAATTCGGGCAGGGT 59.963 61.111 0.00 0.00 40.07 4.34
368 369 0.527565 CACTCTTGGCCCAAATTCGG 59.472 55.000 0.00 0.00 0.00 4.30
369 370 0.527565 CCACTCTTGGCCCAAATTCG 59.472 55.000 0.00 0.00 35.56 3.34
370 371 0.897621 CCCACTCTTGGCCCAAATTC 59.102 55.000 0.00 0.00 42.35 2.17
371 372 1.194121 GCCCACTCTTGGCCCAAATT 61.194 55.000 0.00 0.00 43.33 1.82
372 373 1.610379 GCCCACTCTTGGCCCAAAT 60.610 57.895 0.00 0.00 43.33 2.32
373 374 2.203625 GCCCACTCTTGGCCCAAA 60.204 61.111 0.00 0.00 43.33 3.28
379 380 4.722700 CCCACGGCCCACTCTTGG 62.723 72.222 0.00 0.00 43.50 3.61
391 392 2.250190 GTTTTTCGTCCGCCCACG 59.750 61.111 0.00 0.00 41.36 4.94
392 393 1.161563 TCTGTTTTTCGTCCGCCCAC 61.162 55.000 0.00 0.00 0.00 4.61
393 394 1.146485 TCTGTTTTTCGTCCGCCCA 59.854 52.632 0.00 0.00 0.00 5.36
394 395 1.161563 TGTCTGTTTTTCGTCCGCCC 61.162 55.000 0.00 0.00 0.00 6.13
395 396 0.041576 GTGTCTGTTTTTCGTCCGCC 60.042 55.000 0.00 0.00 0.00 6.13
396 397 0.041576 GGTGTCTGTTTTTCGTCCGC 60.042 55.000 0.00 0.00 0.00 5.54
397 398 1.292061 TGGTGTCTGTTTTTCGTCCG 58.708 50.000 0.00 0.00 0.00 4.79
398 399 3.304458 GGATTGGTGTCTGTTTTTCGTCC 60.304 47.826 0.00 0.00 0.00 4.79
399 400 3.606153 CGGATTGGTGTCTGTTTTTCGTC 60.606 47.826 0.00 0.00 0.00 4.20
400 401 2.289547 CGGATTGGTGTCTGTTTTTCGT 59.710 45.455 0.00 0.00 0.00 3.85
401 402 2.289547 ACGGATTGGTGTCTGTTTTTCG 59.710 45.455 0.00 0.00 34.06 3.46
402 403 3.982576 ACGGATTGGTGTCTGTTTTTC 57.017 42.857 0.00 0.00 34.06 2.29
415 416 1.241315 AAGGCGACCCAAACGGATTG 61.241 55.000 0.00 0.00 38.84 2.67
416 417 1.074248 AAGGCGACCCAAACGGATT 59.926 52.632 0.00 0.00 34.64 3.01
417 418 1.674322 CAAGGCGACCCAAACGGAT 60.674 57.895 0.00 0.00 34.64 4.18
418 419 2.281208 CAAGGCGACCCAAACGGA 60.281 61.111 0.00 0.00 34.64 4.69
419 420 2.190841 AACAAGGCGACCCAAACGG 61.191 57.895 0.00 0.00 37.81 4.44
420 421 1.008995 CAACAAGGCGACCCAAACG 60.009 57.895 0.00 0.00 0.00 3.60
421 422 0.248866 CACAACAAGGCGACCCAAAC 60.249 55.000 0.00 0.00 0.00 2.93
422 423 2.010582 GCACAACAAGGCGACCCAAA 62.011 55.000 0.00 0.00 0.00 3.28
423 424 2.485795 GCACAACAAGGCGACCCAA 61.486 57.895 0.00 0.00 0.00 4.12
424 425 2.904866 GCACAACAAGGCGACCCA 60.905 61.111 0.00 0.00 0.00 4.51
425 426 3.670377 GGCACAACAAGGCGACCC 61.670 66.667 0.00 0.00 0.00 4.46
430 431 0.243636 AAATAGCGGCACAACAAGGC 59.756 50.000 1.45 0.00 0.00 4.35
431 432 1.812571 AGAAATAGCGGCACAACAAGG 59.187 47.619 1.45 0.00 0.00 3.61
432 433 2.226437 ACAGAAATAGCGGCACAACAAG 59.774 45.455 1.45 0.00 0.00 3.16
433 434 2.225491 GACAGAAATAGCGGCACAACAA 59.775 45.455 1.45 0.00 0.00 2.83
434 435 1.804151 GACAGAAATAGCGGCACAACA 59.196 47.619 1.45 0.00 0.00 3.33
435 436 1.130561 GGACAGAAATAGCGGCACAAC 59.869 52.381 1.45 0.00 0.00 3.32
436 437 1.448985 GGACAGAAATAGCGGCACAA 58.551 50.000 1.45 0.00 0.00 3.33
437 438 0.739462 CGGACAGAAATAGCGGCACA 60.739 55.000 1.45 0.00 0.00 4.57
438 439 0.739813 ACGGACAGAAATAGCGGCAC 60.740 55.000 1.45 0.00 0.00 5.01
439 440 0.036765 AACGGACAGAAATAGCGGCA 60.037 50.000 1.45 0.00 0.00 5.69
440 441 1.062148 GAAACGGACAGAAATAGCGGC 59.938 52.381 0.00 0.00 0.00 6.53
441 442 1.323534 CGAAACGGACAGAAATAGCGG 59.676 52.381 0.00 0.00 0.00 5.52
442 443 2.256174 TCGAAACGGACAGAAATAGCG 58.744 47.619 0.00 0.00 0.00 4.26
443 444 3.863424 TCATCGAAACGGACAGAAATAGC 59.137 43.478 0.00 0.00 0.00 2.97
444 445 4.504461 CCTCATCGAAACGGACAGAAATAG 59.496 45.833 0.00 0.00 0.00 1.73
445 446 4.430007 CCTCATCGAAACGGACAGAAATA 58.570 43.478 0.00 0.00 0.00 1.40
446 447 3.262420 CCTCATCGAAACGGACAGAAAT 58.738 45.455 0.00 0.00 0.00 2.17
447 448 2.683968 CCTCATCGAAACGGACAGAAA 58.316 47.619 0.00 0.00 0.00 2.52
448 449 1.671850 GCCTCATCGAAACGGACAGAA 60.672 52.381 0.00 0.00 0.00 3.02
449 450 0.108804 GCCTCATCGAAACGGACAGA 60.109 55.000 0.00 0.00 0.00 3.41
450 451 1.084370 GGCCTCATCGAAACGGACAG 61.084 60.000 0.00 0.00 0.00 3.51
451 452 1.079405 GGCCTCATCGAAACGGACA 60.079 57.895 0.00 0.00 0.00 4.02
452 453 2.165301 CGGCCTCATCGAAACGGAC 61.165 63.158 0.00 0.00 0.00 4.79
453 454 2.183300 CGGCCTCATCGAAACGGA 59.817 61.111 0.00 0.00 0.00 4.69
454 455 2.125673 ACGGCCTCATCGAAACGG 60.126 61.111 0.00 0.00 0.00 4.44
455 456 1.736645 ACACGGCCTCATCGAAACG 60.737 57.895 0.00 0.00 0.00 3.60
456 457 1.787847 CACACGGCCTCATCGAAAC 59.212 57.895 0.00 0.00 0.00 2.78
457 458 2.032634 GCACACGGCCTCATCGAAA 61.033 57.895 0.00 0.00 36.11 3.46
458 459 2.434185 GCACACGGCCTCATCGAA 60.434 61.111 0.00 0.00 36.11 3.71
459 460 4.794439 CGCACACGGCCTCATCGA 62.794 66.667 0.00 0.00 40.31 3.59
461 462 3.188786 GACGCACACGGCCTCATC 61.189 66.667 0.00 0.00 43.48 2.92
470 471 3.712881 GCCAACTCCGACGCACAC 61.713 66.667 0.00 0.00 0.00 3.82
471 472 4.980805 GGCCAACTCCGACGCACA 62.981 66.667 0.00 0.00 0.00 4.57
472 473 2.775032 TAAGGCCAACTCCGACGCAC 62.775 60.000 5.01 0.00 0.00 5.34
473 474 2.575893 TAAGGCCAACTCCGACGCA 61.576 57.895 5.01 0.00 0.00 5.24
474 475 2.098831 GTAAGGCCAACTCCGACGC 61.099 63.158 5.01 0.00 0.00 5.19
475 476 1.447314 GGTAAGGCCAACTCCGACG 60.447 63.158 5.01 0.00 37.17 5.12
476 477 1.078637 GGGTAAGGCCAACTCCGAC 60.079 63.158 5.01 0.00 39.65 4.79
477 478 0.912487 ATGGGTAAGGCCAACTCCGA 60.912 55.000 5.01 0.00 39.65 4.55
478 479 0.834612 TATGGGTAAGGCCAACTCCG 59.165 55.000 5.01 0.00 39.65 4.63
479 480 4.717279 TTATATGGGTAAGGCCAACTCC 57.283 45.455 5.01 7.13 39.65 3.85
480 481 4.459337 GCATTATATGGGTAAGGCCAACTC 59.541 45.833 5.01 2.74 35.86 3.01
481 482 4.141041 TGCATTATATGGGTAAGGCCAACT 60.141 41.667 5.01 0.00 39.79 3.16
482 483 4.148838 TGCATTATATGGGTAAGGCCAAC 58.851 43.478 5.01 1.83 39.79 3.77
483 484 4.461450 TGCATTATATGGGTAAGGCCAA 57.539 40.909 5.01 0.00 39.79 4.52
484 485 4.673328 ATGCATTATATGGGTAAGGCCA 57.327 40.909 5.01 0.00 39.79 5.36
485 486 5.010012 GCATATGCATTATATGGGTAAGGCC 59.990 44.000 22.84 0.00 45.77 5.19
486 487 6.076981 GCATATGCATTATATGGGTAAGGC 57.923 41.667 22.84 0.00 45.77 4.35
517 518 4.497291 TCCCAAGTTCAACACTAACAGT 57.503 40.909 0.00 0.00 32.94 3.55
518 519 4.260620 CGTTCCCAAGTTCAACACTAACAG 60.261 45.833 0.00 0.00 32.94 3.16
519 520 3.623960 CGTTCCCAAGTTCAACACTAACA 59.376 43.478 0.00 0.00 32.94 2.41
520 521 3.872771 TCGTTCCCAAGTTCAACACTAAC 59.127 43.478 0.00 0.00 32.94 2.34
521 522 4.139859 TCGTTCCCAAGTTCAACACTAA 57.860 40.909 0.00 0.00 32.94 2.24
522 523 3.823281 TCGTTCCCAAGTTCAACACTA 57.177 42.857 0.00 0.00 32.94 2.74
523 524 2.702592 TCGTTCCCAAGTTCAACACT 57.297 45.000 0.00 0.00 37.30 3.55
524 525 4.693566 TCATATCGTTCCCAAGTTCAACAC 59.306 41.667 0.00 0.00 0.00 3.32
525 526 4.900684 TCATATCGTTCCCAAGTTCAACA 58.099 39.130 0.00 0.00 0.00 3.33
526 527 5.642063 TCTTCATATCGTTCCCAAGTTCAAC 59.358 40.000 0.00 0.00 0.00 3.18
527 528 5.800296 TCTTCATATCGTTCCCAAGTTCAA 58.200 37.500 0.00 0.00 0.00 2.69
528 529 5.414789 TCTTCATATCGTTCCCAAGTTCA 57.585 39.130 0.00 0.00 0.00 3.18
529 530 6.927294 ATTCTTCATATCGTTCCCAAGTTC 57.073 37.500 0.00 0.00 0.00 3.01
530 531 8.980481 AATATTCTTCATATCGTTCCCAAGTT 57.020 30.769 0.00 0.00 0.00 2.66
531 532 8.840321 CAAATATTCTTCATATCGTTCCCAAGT 58.160 33.333 0.00 0.00 0.00 3.16
532 533 9.056005 TCAAATATTCTTCATATCGTTCCCAAG 57.944 33.333 0.00 0.00 0.00 3.61
533 534 8.972458 TCAAATATTCTTCATATCGTTCCCAA 57.028 30.769 0.00 0.00 0.00 4.12
534 535 9.002600 CATCAAATATTCTTCATATCGTTCCCA 57.997 33.333 0.00 0.00 0.00 4.37
535 536 8.454106 CCATCAAATATTCTTCATATCGTTCCC 58.546 37.037 0.00 0.00 0.00 3.97
536 537 9.003658 ACCATCAAATATTCTTCATATCGTTCC 57.996 33.333 0.00 0.00 0.00 3.62
553 554 9.396022 CATGGTACTAGTTTTCTACCATCAAAT 57.604 33.333 19.93 2.54 41.91 2.32
554 555 8.380099 ACATGGTACTAGTTTTCTACCATCAAA 58.620 33.333 19.93 0.00 41.91 2.69
555 556 7.822334 CACATGGTACTAGTTTTCTACCATCAA 59.178 37.037 19.93 0.00 41.91 2.57
556 557 7.038587 ACACATGGTACTAGTTTTCTACCATCA 60.039 37.037 19.93 0.00 41.91 3.07
557 558 7.328737 ACACATGGTACTAGTTTTCTACCATC 58.671 38.462 19.93 0.00 41.91 3.51
558 559 7.253905 ACACATGGTACTAGTTTTCTACCAT 57.746 36.000 17.87 17.87 43.55 3.55
559 560 6.570957 CGACACATGGTACTAGTTTTCTACCA 60.571 42.308 15.19 15.19 39.48 3.25
560 561 5.803967 CGACACATGGTACTAGTTTTCTACC 59.196 44.000 0.00 2.30 0.00 3.18
561 562 6.307318 CACGACACATGGTACTAGTTTTCTAC 59.693 42.308 0.00 0.00 0.00 2.59
562 563 6.384224 CACGACACATGGTACTAGTTTTCTA 58.616 40.000 0.00 0.00 0.00 2.10
563 564 5.227908 CACGACACATGGTACTAGTTTTCT 58.772 41.667 0.00 0.00 0.00 2.52
564 565 4.143179 GCACGACACATGGTACTAGTTTTC 60.143 45.833 0.00 0.00 0.00 2.29
565 566 3.744426 GCACGACACATGGTACTAGTTTT 59.256 43.478 0.00 0.00 0.00 2.43
566 567 3.323243 GCACGACACATGGTACTAGTTT 58.677 45.455 0.00 0.00 0.00 2.66
567 568 2.353406 GGCACGACACATGGTACTAGTT 60.353 50.000 0.00 0.00 0.00 2.24
568 569 1.203994 GGCACGACACATGGTACTAGT 59.796 52.381 0.00 0.00 0.00 2.57
569 570 1.203758 TGGCACGACACATGGTACTAG 59.796 52.381 0.00 0.00 0.00 2.57
570 571 1.258676 TGGCACGACACATGGTACTA 58.741 50.000 0.00 0.00 0.00 1.82
571 572 0.613260 ATGGCACGACACATGGTACT 59.387 50.000 0.00 0.00 0.00 2.73
572 573 1.006832 GATGGCACGACACATGGTAC 58.993 55.000 0.00 0.00 0.00 3.34
573 574 0.901827 AGATGGCACGACACATGGTA 59.098 50.000 0.00 0.00 0.00 3.25
574 575 0.391661 GAGATGGCACGACACATGGT 60.392 55.000 0.00 0.00 0.00 3.55
575 576 1.091771 GGAGATGGCACGACACATGG 61.092 60.000 0.00 0.00 0.00 3.66
576 577 0.391528 TGGAGATGGCACGACACATG 60.392 55.000 0.00 0.00 0.00 3.21
577 578 0.324614 TTGGAGATGGCACGACACAT 59.675 50.000 0.00 0.00 0.00 3.21
578 579 0.107643 TTTGGAGATGGCACGACACA 59.892 50.000 0.00 0.00 0.00 3.72
579 580 0.798776 CTTTGGAGATGGCACGACAC 59.201 55.000 0.00 0.00 0.00 3.67
584 585 2.019984 GATCACCTTTGGAGATGGCAC 58.980 52.381 1.47 0.00 33.39 5.01
603 604 0.317160 GCCCGGTCATACGATGATGA 59.683 55.000 0.00 0.00 42.04 2.92
605 606 0.756294 TTGCCCGGTCATACGATGAT 59.244 50.000 0.00 0.00 42.04 2.45
611 612 3.120442 GCGTTATAATTGCCCGGTCATAC 60.120 47.826 0.00 0.00 0.00 2.39
613 614 1.877443 GCGTTATAATTGCCCGGTCAT 59.123 47.619 0.00 0.00 0.00 3.06
646 647 7.359595 AGAGAATAGTGAAAGAAGATCGATCG 58.640 38.462 19.33 9.36 0.00 3.69
671 673 1.575244 CGTGTCGTAGGATCTCCGTA 58.425 55.000 0.00 0.00 42.08 4.02
725 728 2.645838 TATCCTGGGCTTTCATGCTC 57.354 50.000 0.00 0.00 0.00 4.26
726 729 3.228453 CAATATCCTGGGCTTTCATGCT 58.772 45.455 0.00 0.00 0.00 3.79
727 730 2.961062 ACAATATCCTGGGCTTTCATGC 59.039 45.455 0.00 0.00 0.00 4.06
728 731 3.571401 GGACAATATCCTGGGCTTTCATG 59.429 47.826 0.00 0.00 45.22 3.07
729 732 3.837355 GGACAATATCCTGGGCTTTCAT 58.163 45.455 0.00 0.00 45.22 2.57
730 733 3.297134 GGACAATATCCTGGGCTTTCA 57.703 47.619 0.00 0.00 45.22 2.69
1080 1086 3.546543 CCGAGGGAGGCGGCATTA 61.547 66.667 13.08 0.00 42.55 1.90
1223 1229 3.771798 AGAGAAATACGAACGAGGAAGC 58.228 45.455 0.14 0.00 0.00 3.86
1444 1460 1.228063 CCCGATGAAGATGCCCAGG 60.228 63.158 0.00 0.00 0.00 4.45
1946 1963 2.620112 GCCGATCCCATGCAATCCG 61.620 63.158 0.00 0.00 0.00 4.18
2005 2022 0.923358 ACACACCACCCCAAAGAAGA 59.077 50.000 0.00 0.00 0.00 2.87
2228 2252 1.800805 GCTGAGCAGTGCAGACTTTA 58.199 50.000 19.20 0.00 35.39 1.85
2370 2397 0.178992 TGAACCAAACAGGGCCTCAG 60.179 55.000 0.95 0.00 43.89 3.35
2371 2398 0.482446 ATGAACCAAACAGGGCCTCA 59.518 50.000 0.95 0.00 43.89 3.86
2372 2399 2.507407 TATGAACCAAACAGGGCCTC 57.493 50.000 0.95 0.00 43.89 4.70
2373 2400 2.110011 ACTTATGAACCAAACAGGGCCT 59.890 45.455 0.00 0.00 43.89 5.19
2374 2401 2.492088 GACTTATGAACCAAACAGGGCC 59.508 50.000 0.00 0.00 43.89 5.80
2375 2402 3.421844 AGACTTATGAACCAAACAGGGC 58.578 45.455 0.00 0.00 43.89 5.19
2376 2403 5.648092 CCTAAGACTTATGAACCAAACAGGG 59.352 44.000 0.00 0.00 43.89 4.45
2377 2404 6.371825 GTCCTAAGACTTATGAACCAAACAGG 59.628 42.308 2.20 0.00 40.95 4.00
2378 2405 7.365840 GTCCTAAGACTTATGAACCAAACAG 57.634 40.000 2.20 0.00 40.10 3.16
2408 2435 9.886132 GACTTGAGACTTATAAGTTGGGATTAA 57.114 33.333 18.96 7.57 39.88 1.40
2409 2436 9.268282 AGACTTGAGACTTATAAGTTGGGATTA 57.732 33.333 18.96 2.08 39.88 1.75
2410 2437 8.152023 AGACTTGAGACTTATAAGTTGGGATT 57.848 34.615 18.96 3.86 39.88 3.01
2411 2438 7.621683 AGAGACTTGAGACTTATAAGTTGGGAT 59.378 37.037 18.96 4.56 39.88 3.85
2412 2439 6.954684 AGAGACTTGAGACTTATAAGTTGGGA 59.045 38.462 18.96 6.15 39.88 4.37
2413 2440 7.176589 AGAGACTTGAGACTTATAAGTTGGG 57.823 40.000 18.96 10.37 39.88 4.12
2421 2448 9.095700 AGGACTTTTTAGAGACTTGAGACTTAT 57.904 33.333 0.00 0.00 0.00 1.73
2422 2449 8.480133 AGGACTTTTTAGAGACTTGAGACTTA 57.520 34.615 0.00 0.00 0.00 2.24
2423 2450 7.368198 AGGACTTTTTAGAGACTTGAGACTT 57.632 36.000 0.00 0.00 0.00 3.01
2424 2451 6.987403 AGGACTTTTTAGAGACTTGAGACT 57.013 37.500 0.00 0.00 0.00 3.24
2425 2452 7.599621 GGTAAGGACTTTTTAGAGACTTGAGAC 59.400 40.741 0.00 0.00 0.00 3.36
2426 2453 7.509659 AGGTAAGGACTTTTTAGAGACTTGAGA 59.490 37.037 0.00 0.00 0.00 3.27
2427 2454 7.600752 CAGGTAAGGACTTTTTAGAGACTTGAG 59.399 40.741 0.00 0.00 0.00 3.02
2428 2455 7.070821 ACAGGTAAGGACTTTTTAGAGACTTGA 59.929 37.037 0.00 0.00 0.00 3.02
2429 2456 7.217906 ACAGGTAAGGACTTTTTAGAGACTTG 58.782 38.462 0.00 0.00 0.00 3.16
2430 2457 7.376335 ACAGGTAAGGACTTTTTAGAGACTT 57.624 36.000 0.00 0.00 0.00 3.01
2431 2458 6.997942 ACAGGTAAGGACTTTTTAGAGACT 57.002 37.500 0.00 0.00 0.00 3.24
2432 2459 7.041303 CCAAACAGGTAAGGACTTTTTAGAGAC 60.041 40.741 0.00 0.00 0.00 3.36
2433 2460 6.996282 CCAAACAGGTAAGGACTTTTTAGAGA 59.004 38.462 0.00 0.00 0.00 3.10
2434 2461 7.203255 CCAAACAGGTAAGGACTTTTTAGAG 57.797 40.000 0.00 0.00 0.00 2.43
2450 2477 0.478507 AGTCCCAGGAACCAAACAGG 59.521 55.000 0.00 0.00 45.67 4.00
2451 2478 2.364972 AAGTCCCAGGAACCAAACAG 57.635 50.000 0.00 0.00 0.00 3.16
2452 2479 5.073965 ACTTATAAGTCCCAGGAACCAAACA 59.926 40.000 12.50 0.00 32.86 2.83
2453 2480 5.567430 ACTTATAAGTCCCAGGAACCAAAC 58.433 41.667 12.50 0.00 32.86 2.93
2454 2481 5.853572 ACTTATAAGTCCCAGGAACCAAA 57.146 39.130 12.50 0.00 32.86 3.28
2467 2494 9.448587 AATGTGGTCTTATAGGGACTTATAAGT 57.551 33.333 18.05 18.05 43.16 2.24
2470 2497 9.886337 TGTAATGTGGTCTTATAGGGACTTATA 57.114 33.333 7.52 0.00 41.75 0.98
2471 2498 8.792830 TGTAATGTGGTCTTATAGGGACTTAT 57.207 34.615 7.52 0.00 41.75 1.73
2472 2499 8.480501 GTTGTAATGTGGTCTTATAGGGACTTA 58.519 37.037 7.52 0.00 41.75 2.24
2473 2500 7.182206 AGTTGTAATGTGGTCTTATAGGGACTT 59.818 37.037 7.52 0.00 41.75 3.01
2474 2501 6.672657 AGTTGTAATGTGGTCTTATAGGGACT 59.327 38.462 7.52 0.00 46.37 3.85
2475 2502 6.885922 AGTTGTAATGTGGTCTTATAGGGAC 58.114 40.000 0.00 0.00 0.00 4.46
2476 2503 8.792830 ATAGTTGTAATGTGGTCTTATAGGGA 57.207 34.615 0.00 0.00 0.00 4.20
2482 2509 9.880157 GGAACTTATAGTTGTAATGTGGTCTTA 57.120 33.333 0.00 0.00 38.80 2.10
2483 2510 8.603304 AGGAACTTATAGTTGTAATGTGGTCTT 58.397 33.333 0.00 0.00 38.80 3.01
2484 2511 8.041323 CAGGAACTTATAGTTGTAATGTGGTCT 58.959 37.037 0.00 0.00 38.80 3.85
2485 2512 7.822822 ACAGGAACTTATAGTTGTAATGTGGTC 59.177 37.037 0.00 0.00 38.80 4.02
2486 2513 7.686434 ACAGGAACTTATAGTTGTAATGTGGT 58.314 34.615 0.00 0.00 38.80 4.16
2487 2514 9.661563 TTACAGGAACTTATAGTTGTAATGTGG 57.338 33.333 0.00 0.00 38.80 4.17
2493 2520 9.750783 AGAGTCTTACAGGAACTTATAGTTGTA 57.249 33.333 0.00 0.00 38.80 2.41
2494 2521 8.653036 AGAGTCTTACAGGAACTTATAGTTGT 57.347 34.615 0.00 0.00 38.80 3.32
2495 2522 8.192110 GGAGAGTCTTACAGGAACTTATAGTTG 58.808 40.741 0.00 0.00 38.80 3.16
2496 2523 8.117312 AGGAGAGTCTTACAGGAACTTATAGTT 58.883 37.037 0.00 0.00 41.95 2.24
2497 2524 7.645002 AGGAGAGTCTTACAGGAACTTATAGT 58.355 38.462 0.00 0.00 34.60 2.12
2498 2525 8.410141 CAAGGAGAGTCTTACAGGAACTTATAG 58.590 40.741 0.00 0.00 34.60 1.31
2499 2526 8.114102 TCAAGGAGAGTCTTACAGGAACTTATA 58.886 37.037 0.00 0.00 34.60 0.98
2500 2527 6.954684 TCAAGGAGAGTCTTACAGGAACTTAT 59.045 38.462 0.00 0.00 34.60 1.73
2501 2528 6.312529 TCAAGGAGAGTCTTACAGGAACTTA 58.687 40.000 0.00 0.00 34.60 2.24
2502 2529 5.148502 TCAAGGAGAGTCTTACAGGAACTT 58.851 41.667 0.00 0.00 34.60 2.66
2503 2530 4.742012 TCAAGGAGAGTCTTACAGGAACT 58.258 43.478 0.00 0.00 43.88 3.01
2504 2531 4.767928 TCTCAAGGAGAGTCTTACAGGAAC 59.232 45.833 0.00 0.00 44.98 3.62
2505 2532 4.999310 TCTCAAGGAGAGTCTTACAGGAA 58.001 43.478 0.00 0.00 44.98 3.36
2506 2533 4.659529 TCTCAAGGAGAGTCTTACAGGA 57.340 45.455 0.00 0.00 44.98 3.86
2531 2558 5.960811 TGGGCATTTGGGACTTATGAAATAA 59.039 36.000 0.00 0.00 36.20 1.40
2532 2559 5.362430 GTGGGCATTTGGGACTTATGAAATA 59.638 40.000 0.00 0.00 0.00 1.40
2533 2560 4.162131 GTGGGCATTTGGGACTTATGAAAT 59.838 41.667 0.00 0.00 0.00 2.17
2534 2561 3.513515 GTGGGCATTTGGGACTTATGAAA 59.486 43.478 0.00 0.00 0.00 2.69
2535 2562 3.096092 GTGGGCATTTGGGACTTATGAA 58.904 45.455 0.00 0.00 0.00 2.57
2536 2563 2.311542 AGTGGGCATTTGGGACTTATGA 59.688 45.455 0.00 0.00 0.00 2.15
2537 2564 2.738743 AGTGGGCATTTGGGACTTATG 58.261 47.619 0.00 0.00 0.00 1.90
2538 2565 3.473113 AAGTGGGCATTTGGGACTTAT 57.527 42.857 0.00 0.00 0.00 1.73
2539 2566 2.990740 AAGTGGGCATTTGGGACTTA 57.009 45.000 0.00 0.00 0.00 2.24
2540 2567 2.101640 AAAGTGGGCATTTGGGACTT 57.898 45.000 0.00 0.00 0.00 3.01
2541 2568 2.990740 TAAAGTGGGCATTTGGGACT 57.009 45.000 0.00 0.00 0.00 3.85
2542 2569 2.897326 ACTTAAAGTGGGCATTTGGGAC 59.103 45.455 0.00 0.00 0.00 4.46
2543 2570 3.161866 GACTTAAAGTGGGCATTTGGGA 58.838 45.455 0.00 0.00 0.00 4.37
2544 2571 3.165071 AGACTTAAAGTGGGCATTTGGG 58.835 45.455 0.00 0.00 0.00 4.12
2545 2572 4.082125 AGAGACTTAAAGTGGGCATTTGG 58.918 43.478 0.00 0.00 0.00 3.28
2546 2573 8.506168 TTATAGAGACTTAAAGTGGGCATTTG 57.494 34.615 0.00 0.00 0.00 2.32
2547 2574 8.329502 ACTTATAGAGACTTAAAGTGGGCATTT 58.670 33.333 0.00 0.00 0.00 2.32
2548 2575 7.862675 ACTTATAGAGACTTAAAGTGGGCATT 58.137 34.615 0.00 0.00 0.00 3.56
2549 2576 7.419172 GGACTTATAGAGACTTAAAGTGGGCAT 60.419 40.741 0.00 0.00 30.83 4.40
2550 2577 6.127140 GGACTTATAGAGACTTAAAGTGGGCA 60.127 42.308 0.00 0.00 30.83 5.36
2551 2578 6.282167 GGACTTATAGAGACTTAAAGTGGGC 58.718 44.000 0.00 0.00 30.83 5.36
2552 2579 6.612049 AGGGACTTATAGAGACTTAAAGTGGG 59.388 42.308 0.00 0.00 27.25 4.61
2553 2580 7.201929 GGAGGGACTTATAGAGACTTAAAGTGG 60.202 44.444 0.00 0.00 41.55 4.00
2554 2581 7.562088 AGGAGGGACTTATAGAGACTTAAAGTG 59.438 40.741 0.00 0.00 41.55 3.16
2555 2582 7.562088 CAGGAGGGACTTATAGAGACTTAAAGT 59.438 40.741 0.00 0.00 41.55 2.66
2556 2583 7.562088 ACAGGAGGGACTTATAGAGACTTAAAG 59.438 40.741 0.00 0.00 41.55 1.85
2557 2584 7.420029 ACAGGAGGGACTTATAGAGACTTAAA 58.580 38.462 0.00 0.00 41.55 1.52
2558 2585 6.982899 ACAGGAGGGACTTATAGAGACTTAA 58.017 40.000 0.00 0.00 41.55 1.85
2559 2586 6.593759 ACAGGAGGGACTTATAGAGACTTA 57.406 41.667 0.00 0.00 41.55 2.24
2560 2587 5.475398 ACAGGAGGGACTTATAGAGACTT 57.525 43.478 0.00 0.00 41.55 3.01
2561 2588 5.475398 AACAGGAGGGACTTATAGAGACT 57.525 43.478 0.00 0.00 41.55 3.24
2562 2589 6.834969 ACTAAACAGGAGGGACTTATAGAGAC 59.165 42.308 0.00 0.00 41.55 3.36
2563 2590 6.982899 ACTAAACAGGAGGGACTTATAGAGA 58.017 40.000 0.00 0.00 41.55 3.10
2564 2591 7.663043 AACTAAACAGGAGGGACTTATAGAG 57.337 40.000 0.00 0.00 41.55 2.43
2565 2592 9.198475 CTAAACTAAACAGGAGGGACTTATAGA 57.802 37.037 0.00 0.00 41.55 1.98
2566 2593 9.198475 TCTAAACTAAACAGGAGGGACTTATAG 57.802 37.037 0.00 0.00 41.55 1.31
2567 2594 9.725206 ATCTAAACTAAACAGGAGGGACTTATA 57.275 33.333 0.00 0.00 41.55 0.98
2568 2595 8.487028 CATCTAAACTAAACAGGAGGGACTTAT 58.513 37.037 0.00 0.00 41.55 1.73
2569 2596 7.456902 ACATCTAAACTAAACAGGAGGGACTTA 59.543 37.037 0.00 0.00 41.55 2.24
2570 2597 6.272558 ACATCTAAACTAAACAGGAGGGACTT 59.727 38.462 0.00 0.00 41.55 3.01
2572 2599 5.875359 CACATCTAAACTAAACAGGAGGGAC 59.125 44.000 0.00 0.00 0.00 4.46
2573 2600 5.783360 TCACATCTAAACTAAACAGGAGGGA 59.217 40.000 0.00 0.00 0.00 4.20
2574 2601 5.875359 GTCACATCTAAACTAAACAGGAGGG 59.125 44.000 0.00 0.00 0.00 4.30
2575 2602 6.702329 AGTCACATCTAAACTAAACAGGAGG 58.298 40.000 0.00 0.00 0.00 4.30
2576 2603 9.877178 ATAAGTCACATCTAAACTAAACAGGAG 57.123 33.333 0.00 0.00 0.00 3.69
2583 2610 9.710818 AGTCCCTATAAGTCACATCTAAACTAA 57.289 33.333 0.00 0.00 0.00 2.24
2584 2611 9.710818 AAGTCCCTATAAGTCACATCTAAACTA 57.289 33.333 0.00 0.00 0.00 2.24
2585 2612 8.611051 AAGTCCCTATAAGTCACATCTAAACT 57.389 34.615 0.00 0.00 0.00 2.66
2586 2613 9.668497 AAAAGTCCCTATAAGTCACATCTAAAC 57.332 33.333 0.00 0.00 0.00 2.01
2610 2637 9.081204 GGACTTATTGGTTTAGGGACTTAAAAA 57.919 33.333 0.00 0.00 41.75 1.94
2611 2638 8.226112 TGGACTTATTGGTTTAGGGACTTAAAA 58.774 33.333 0.00 0.00 41.75 1.52
2612 2639 7.757611 TGGACTTATTGGTTTAGGGACTTAAA 58.242 34.615 0.00 0.00 41.75 1.52
2613 2640 7.332433 TGGACTTATTGGTTTAGGGACTTAA 57.668 36.000 0.00 0.00 41.75 1.85
2614 2641 6.956102 TGGACTTATTGGTTTAGGGACTTA 57.044 37.500 0.00 0.00 41.75 2.24
2615 2642 5.853572 TGGACTTATTGGTTTAGGGACTT 57.146 39.130 0.00 0.00 41.75 3.01
2616 2643 5.340027 CCATGGACTTATTGGTTTAGGGACT 60.340 44.000 5.56 0.00 46.37 3.85
2617 2644 4.887655 CCATGGACTTATTGGTTTAGGGAC 59.112 45.833 5.56 0.00 0.00 4.46
2618 2645 4.791334 TCCATGGACTTATTGGTTTAGGGA 59.209 41.667 11.44 0.00 0.00 4.20
2619 2646 5.124036 TCCATGGACTTATTGGTTTAGGG 57.876 43.478 11.44 0.00 0.00 3.53
2620 2647 6.435904 TGTTTCCATGGACTTATTGGTTTAGG 59.564 38.462 15.91 0.00 0.00 2.69
2621 2648 7.461182 TGTTTCCATGGACTTATTGGTTTAG 57.539 36.000 15.91 0.00 0.00 1.85
2622 2649 7.841282 TTGTTTCCATGGACTTATTGGTTTA 57.159 32.000 15.91 0.00 0.00 2.01
2623 2650 6.739331 TTGTTTCCATGGACTTATTGGTTT 57.261 33.333 15.91 0.00 0.00 3.27
2624 2651 6.098982 TGTTTGTTTCCATGGACTTATTGGTT 59.901 34.615 15.91 0.00 0.00 3.67
2625 2652 5.600484 TGTTTGTTTCCATGGACTTATTGGT 59.400 36.000 15.91 0.00 0.00 3.67
2626 2653 5.925969 GTGTTTGTTTCCATGGACTTATTGG 59.074 40.000 15.91 0.00 0.00 3.16
2627 2654 5.925969 GGTGTTTGTTTCCATGGACTTATTG 59.074 40.000 15.91 0.00 0.00 1.90
2628 2655 5.011635 GGGTGTTTGTTTCCATGGACTTATT 59.988 40.000 15.91 0.00 0.00 1.40
2629 2656 4.526650 GGGTGTTTGTTTCCATGGACTTAT 59.473 41.667 15.91 0.00 0.00 1.73
2630 2657 3.892588 GGGTGTTTGTTTCCATGGACTTA 59.107 43.478 15.91 0.00 0.00 2.24
2631 2658 2.698274 GGGTGTTTGTTTCCATGGACTT 59.302 45.455 15.91 0.00 0.00 3.01
2632 2659 2.091333 AGGGTGTTTGTTTCCATGGACT 60.091 45.455 15.91 0.58 0.00 3.85
2633 2660 2.296190 GAGGGTGTTTGTTTCCATGGAC 59.704 50.000 15.91 5.11 0.00 4.02
2634 2661 2.176798 AGAGGGTGTTTGTTTCCATGGA 59.823 45.455 11.44 11.44 0.00 3.41
2635 2662 2.297033 CAGAGGGTGTTTGTTTCCATGG 59.703 50.000 4.97 4.97 0.00 3.66
2636 2663 3.221771 TCAGAGGGTGTTTGTTTCCATG 58.778 45.455 0.00 0.00 0.00 3.66
2637 2664 3.593442 TCAGAGGGTGTTTGTTTCCAT 57.407 42.857 0.00 0.00 0.00 3.41
2638 2665 3.374042 TTCAGAGGGTGTTTGTTTCCA 57.626 42.857 0.00 0.00 0.00 3.53
2639 2666 3.445805 TGTTTCAGAGGGTGTTTGTTTCC 59.554 43.478 0.00 0.00 0.00 3.13
2640 2667 4.398044 TCTGTTTCAGAGGGTGTTTGTTTC 59.602 41.667 0.00 0.00 35.39 2.78
2641 2668 4.340617 TCTGTTTCAGAGGGTGTTTGTTT 58.659 39.130 0.00 0.00 35.39 2.83
2642 2669 3.963129 TCTGTTTCAGAGGGTGTTTGTT 58.037 40.909 0.00 0.00 35.39 2.83
2643 2670 3.644966 TCTGTTTCAGAGGGTGTTTGT 57.355 42.857 0.00 0.00 35.39 2.83
2739 2766 5.339008 AAATACACCGCAGAGATGAACTA 57.661 39.130 0.00 0.00 0.00 2.24
2750 2777 2.885266 TGCTTTTGGTAAATACACCGCA 59.115 40.909 0.00 0.00 41.88 5.69
2751 2778 3.562567 TGCTTTTGGTAAATACACCGC 57.437 42.857 0.00 0.00 41.88 5.68
2752 2779 4.915085 CAGTTGCTTTTGGTAAATACACCG 59.085 41.667 0.00 0.00 41.88 4.94
2753 2780 5.838529 ACAGTTGCTTTTGGTAAATACACC 58.161 37.500 0.00 0.00 39.20 4.16
2754 2781 6.575942 CGTACAGTTGCTTTTGGTAAATACAC 59.424 38.462 0.00 0.00 0.00 2.90
2781 2813 7.597672 TGCTACTTTGGCACCTATGGTACAG 62.598 48.000 0.00 0.00 36.80 2.74
2782 2814 5.849098 TGCTACTTTGGCACCTATGGTACA 61.849 45.833 0.00 0.00 37.53 2.90
2783 2815 3.203716 GCTACTTTGGCACCTATGGTAC 58.796 50.000 0.00 0.00 32.11 3.34
2784 2816 2.841266 TGCTACTTTGGCACCTATGGTA 59.159 45.455 0.00 0.00 32.11 3.25
2785 2817 1.633432 TGCTACTTTGGCACCTATGGT 59.367 47.619 0.00 0.00 35.62 3.55
2786 2818 2.418368 TGCTACTTTGGCACCTATGG 57.582 50.000 0.00 0.00 34.56 2.74
2814 2846 7.114095 GGATACTGTTTTGGGGACTAACAATA 58.886 38.462 0.00 0.00 35.95 1.90


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.