Multiple sequence alignment - TraesCS2B01G339600
BLAST Results
Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.
qseqid | sseqid | percentage.identical | alignment.length | no.mismatch | no.gap.openings | qstart | qend | sstart | send | evalue | bitscore | |
---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS2B01G339600 | chr2B | 100.000 | 6612 | 0 | 0 | 1 | 6612 | 484935459 | 484928848 | 0.000000e+00 | 12211.0 |
1 | TraesCS2B01G339600 | chr2B | 85.549 | 519 | 61 | 9 | 323 | 835 | 5336143 | 5335633 | 1.260000e-146 | 531.0 |
2 | TraesCS2B01G339600 | chr2B | 85.192 | 520 | 56 | 11 | 323 | 835 | 96618728 | 96619233 | 1.270000e-141 | 514.0 |
3 | TraesCS2B01G339600 | chr2B | 93.631 | 157 | 10 | 0 | 4286 | 4442 | 578597859 | 578597703 | 1.110000e-57 | 235.0 |
4 | TraesCS2B01G339600 | chr2B | 97.143 | 70 | 2 | 0 | 239 | 308 | 484935155 | 484935086 | 1.160000e-22 | 119.0 |
5 | TraesCS2B01G339600 | chr2D | 93.926 | 1811 | 73 | 8 | 851 | 2625 | 410413095 | 410411286 | 0.000000e+00 | 2700.0 |
6 | TraesCS2B01G339600 | chr2D | 94.646 | 1681 | 59 | 12 | 2624 | 4280 | 410411256 | 410409583 | 0.000000e+00 | 2577.0 |
7 | TraesCS2B01G339600 | chr2D | 88.818 | 1261 | 96 | 31 | 5226 | 6468 | 410408659 | 410407426 | 0.000000e+00 | 1506.0 |
8 | TraesCS2B01G339600 | chr2D | 93.943 | 875 | 21 | 9 | 4286 | 5155 | 410409541 | 410408694 | 0.000000e+00 | 1293.0 |
9 | TraesCS2B01G339600 | chr2D | 88.503 | 748 | 60 | 14 | 2920 | 3643 | 380417279 | 380416534 | 0.000000e+00 | 881.0 |
10 | TraesCS2B01G339600 | chr2D | 92.432 | 555 | 32 | 7 | 305 | 854 | 307863014 | 307862465 | 0.000000e+00 | 784.0 |
11 | TraesCS2B01G339600 | chr2D | 92.652 | 313 | 18 | 1 | 1 | 308 | 307863257 | 307862945 | 4.700000e-121 | 446.0 |
12 | TraesCS2B01G339600 | chr2D | 95.833 | 48 | 0 | 1 | 5165 | 5210 | 247819760 | 247819807 | 7.110000e-10 | 76.8 |
13 | TraesCS2B01G339600 | chr2A | 92.237 | 1198 | 55 | 11 | 2624 | 3816 | 578389504 | 578388340 | 0.000000e+00 | 1663.0 |
14 | TraesCS2B01G339600 | chr2A | 97.025 | 874 | 21 | 2 | 4286 | 5155 | 578387711 | 578386839 | 0.000000e+00 | 1465.0 |
15 | TraesCS2B01G339600 | chr2A | 97.133 | 837 | 23 | 1 | 851 | 1686 | 578394098 | 578393262 | 0.000000e+00 | 1411.0 |
16 | TraesCS2B01G339600 | chr2A | 86.266 | 1114 | 92 | 44 | 5226 | 6313 | 578386804 | 578385726 | 0.000000e+00 | 1153.0 |
17 | TraesCS2B01G339600 | chr2A | 91.083 | 785 | 48 | 10 | 1862 | 2625 | 578390317 | 578389534 | 0.000000e+00 | 1042.0 |
18 | TraesCS2B01G339600 | chr2A | 88.770 | 748 | 58 | 14 | 2920 | 3643 | 515952393 | 515951648 | 0.000000e+00 | 893.0 |
19 | TraesCS2B01G339600 | chr2A | 97.216 | 467 | 12 | 1 | 3814 | 4280 | 578388217 | 578387752 | 0.000000e+00 | 789.0 |
20 | TraesCS2B01G339600 | chr2A | 92.143 | 560 | 30 | 8 | 305 | 852 | 608905291 | 608904734 | 0.000000e+00 | 778.0 |
21 | TraesCS2B01G339600 | chr2A | 90.566 | 318 | 18 | 4 | 1 | 308 | 608905536 | 608905221 | 1.720000e-110 | 411.0 |
22 | TraesCS2B01G339600 | chr2A | 92.216 | 167 | 11 | 2 | 4277 | 4442 | 70985581 | 70985746 | 1.110000e-57 | 235.0 |
23 | TraesCS2B01G339600 | chr2A | 93.082 | 159 | 10 | 1 | 4286 | 4444 | 342647554 | 342647397 | 1.430000e-56 | 231.0 |
24 | TraesCS2B01G339600 | chr2A | 91.304 | 161 | 12 | 2 | 1662 | 1821 | 578390486 | 578390327 | 1.120000e-52 | 219.0 |
25 | TraesCS2B01G339600 | chr2A | 88.750 | 80 | 6 | 1 | 6420 | 6496 | 578383236 | 578383157 | 1.960000e-15 | 95.3 |
26 | TraesCS2B01G339600 | chr2A | 91.379 | 58 | 0 | 4 | 5163 | 5217 | 564265036 | 564264981 | 2.560000e-09 | 75.0 |
27 | TraesCS2B01G339600 | chr2A | 95.349 | 43 | 2 | 0 | 6382 | 6424 | 578384687 | 578384645 | 1.190000e-07 | 69.4 |
28 | TraesCS2B01G339600 | chr4D | 94.022 | 552 | 26 | 5 | 305 | 851 | 106743933 | 106744482 | 0.000000e+00 | 830.0 |
29 | TraesCS2B01G339600 | chr4D | 87.059 | 680 | 61 | 9 | 2920 | 3577 | 303078535 | 303077861 | 0.000000e+00 | 743.0 |
30 | TraesCS2B01G339600 | chr4D | 94.481 | 308 | 17 | 0 | 1 | 308 | 106743695 | 106744002 | 6.000000e-130 | 475.0 |
31 | TraesCS2B01G339600 | chr4D | 90.136 | 294 | 26 | 2 | 3350 | 3643 | 409444650 | 409444360 | 4.840000e-101 | 379.0 |
32 | TraesCS2B01G339600 | chr4D | 84.596 | 396 | 40 | 7 | 2239 | 2625 | 417361338 | 417360955 | 2.250000e-99 | 374.0 |
33 | TraesCS2B01G339600 | chr4D | 86.154 | 260 | 29 | 5 | 1627 | 1883 | 417361844 | 417361589 | 2.350000e-69 | 274.0 |
34 | TraesCS2B01G339600 | chr4D | 86.869 | 198 | 25 | 1 | 1958 | 2155 | 417361592 | 417361396 | 3.100000e-53 | 220.0 |
35 | TraesCS2B01G339600 | chr4D | 90.683 | 161 | 14 | 1 | 2624 | 2784 | 417360924 | 417360765 | 5.190000e-51 | 213.0 |
36 | TraesCS2B01G339600 | chr4D | 94.444 | 54 | 0 | 2 | 5164 | 5214 | 15316078 | 15316131 | 5.500000e-11 | 80.5 |
37 | TraesCS2B01G339600 | chr4D | 95.652 | 46 | 0 | 2 | 5164 | 5208 | 93828242 | 93828198 | 9.200000e-09 | 73.1 |
38 | TraesCS2B01G339600 | chr4D | 90.741 | 54 | 3 | 1 | 5165 | 5216 | 110080986 | 110081039 | 3.310000e-08 | 71.3 |
39 | TraesCS2B01G339600 | chr7D | 86.767 | 733 | 62 | 17 | 2921 | 3629 | 369457277 | 369457998 | 0.000000e+00 | 784.0 |
40 | TraesCS2B01G339600 | chr7D | 88.367 | 447 | 44 | 5 | 3202 | 3643 | 390685297 | 390684854 | 1.260000e-146 | 531.0 |
41 | TraesCS2B01G339600 | chr7D | 92.169 | 166 | 11 | 2 | 4282 | 4446 | 161541254 | 161541418 | 3.990000e-57 | 233.0 |
42 | TraesCS2B01G339600 | chr7D | 95.833 | 48 | 0 | 1 | 5165 | 5210 | 518639166 | 518639119 | 7.110000e-10 | 76.8 |
43 | TraesCS2B01G339600 | chr7D | 89.474 | 57 | 2 | 3 | 5165 | 5218 | 412155242 | 412155187 | 1.190000e-07 | 69.4 |
44 | TraesCS2B01G339600 | chr7D | 88.333 | 60 | 4 | 2 | 5164 | 5220 | 478795364 | 478795305 | 1.190000e-07 | 69.4 |
45 | TraesCS2B01G339600 | chr1D | 85.830 | 741 | 75 | 15 | 2920 | 3631 | 194673771 | 194674510 | 0.000000e+00 | 760.0 |
46 | TraesCS2B01G339600 | chr1D | 100.000 | 40 | 0 | 0 | 5169 | 5208 | 81740711 | 81740672 | 2.560000e-09 | 75.0 |
47 | TraesCS2B01G339600 | chr1D | 89.655 | 58 | 4 | 1 | 5165 | 5220 | 83675538 | 83675595 | 9.200000e-09 | 73.1 |
48 | TraesCS2B01G339600 | chr1D | 93.878 | 49 | 1 | 1 | 5165 | 5211 | 354518966 | 354518918 | 9.200000e-09 | 73.1 |
49 | TraesCS2B01G339600 | chr1D | 93.750 | 48 | 1 | 1 | 5165 | 5210 | 437289977 | 437290024 | 3.310000e-08 | 71.3 |
50 | TraesCS2B01G339600 | chr3B | 90.926 | 551 | 32 | 6 | 305 | 851 | 73996136 | 73995600 | 0.000000e+00 | 725.0 |
51 | TraesCS2B01G339600 | chr3B | 92.073 | 164 | 12 | 1 | 4280 | 4442 | 761137362 | 761137199 | 5.160000e-56 | 230.0 |
52 | TraesCS2B01G339600 | chr3B | 91.613 | 155 | 7 | 1 | 154 | 308 | 73996215 | 73996067 | 6.720000e-50 | 209.0 |
53 | TraesCS2B01G339600 | chr3B | 91.964 | 112 | 9 | 0 | 1 | 112 | 73996328 | 73996217 | 2.470000e-34 | 158.0 |
54 | TraesCS2B01G339600 | chr3B | 92.308 | 52 | 2 | 2 | 5164 | 5214 | 662472230 | 662472180 | 9.200000e-09 | 73.1 |
55 | TraesCS2B01G339600 | chr3A | 94.624 | 465 | 19 | 6 | 305 | 766 | 733269134 | 733269595 | 0.000000e+00 | 715.0 |
56 | TraesCS2B01G339600 | chr3A | 93.506 | 308 | 20 | 0 | 1 | 308 | 733268896 | 733269203 | 6.040000e-125 | 459.0 |
57 | TraesCS2B01G339600 | chr3A | 86.667 | 105 | 9 | 2 | 759 | 858 | 733281660 | 733281764 | 1.950000e-20 | 111.0 |
58 | TraesCS2B01G339600 | chr3A | 96.154 | 52 | 0 | 1 | 5166 | 5215 | 481889772 | 481889721 | 4.250000e-12 | 84.2 |
59 | TraesCS2B01G339600 | chr3A | 89.831 | 59 | 0 | 5 | 5164 | 5217 | 287684732 | 287684675 | 3.310000e-08 | 71.3 |
60 | TraesCS2B01G339600 | chr7B | 84.247 | 730 | 102 | 10 | 2920 | 3643 | 304123725 | 304123003 | 0.000000e+00 | 699.0 |
61 | TraesCS2B01G339600 | chr7B | 90.376 | 426 | 38 | 2 | 3202 | 3627 | 387156081 | 387155659 | 2.080000e-154 | 556.0 |
62 | TraesCS2B01G339600 | chr7B | 83.704 | 540 | 57 | 24 | 323 | 833 | 692314181 | 692314718 | 1.290000e-131 | 481.0 |
63 | TraesCS2B01G339600 | chr7B | 84.783 | 322 | 43 | 4 | 3260 | 3576 | 222307121 | 222306801 | 1.070000e-82 | 318.0 |
64 | TraesCS2B01G339600 | chr3D | 81.974 | 699 | 106 | 12 | 2920 | 3609 | 39532290 | 39531603 | 5.750000e-160 | 575.0 |
65 | TraesCS2B01G339600 | chr3D | 87.562 | 402 | 40 | 4 | 3241 | 3637 | 46481312 | 46481708 | 2.170000e-124 | 457.0 |
66 | TraesCS2B01G339600 | chr3D | 91.124 | 169 | 13 | 2 | 4283 | 4450 | 540564905 | 540564738 | 1.850000e-55 | 228.0 |
67 | TraesCS2B01G339600 | chr3D | 93.878 | 49 | 1 | 1 | 5165 | 5211 | 278928361 | 278928313 | 9.200000e-09 | 73.1 |
68 | TraesCS2B01G339600 | chr3D | 93.750 | 48 | 1 | 1 | 5166 | 5211 | 177818822 | 177818869 | 3.310000e-08 | 71.3 |
69 | TraesCS2B01G339600 | chr3D | 89.474 | 57 | 1 | 4 | 5164 | 5217 | 378106695 | 378106641 | 4.280000e-07 | 67.6 |
70 | TraesCS2B01G339600 | chr6D | 85.926 | 540 | 62 | 9 | 323 | 851 | 194266073 | 194265537 | 1.240000e-156 | 564.0 |
71 | TraesCS2B01G339600 | chr6D | 93.789 | 161 | 9 | 1 | 1 | 161 | 457554429 | 457554588 | 2.380000e-59 | 241.0 |
72 | TraesCS2B01G339600 | chr6D | 92.638 | 163 | 10 | 1 | 146 | 308 | 457577388 | 457577548 | 3.990000e-57 | 233.0 |
73 | TraesCS2B01G339600 | chr6D | 95.652 | 115 | 5 | 0 | 305 | 419 | 457577479 | 457577593 | 1.130000e-42 | 185.0 |
74 | TraesCS2B01G339600 | chr6D | 94.000 | 50 | 1 | 1 | 5164 | 5211 | 34019174 | 34019223 | 2.560000e-09 | 75.0 |
75 | TraesCS2B01G339600 | chr6D | 92.157 | 51 | 0 | 4 | 5165 | 5212 | 73831542 | 73831591 | 1.190000e-07 | 69.4 |
76 | TraesCS2B01G339600 | chr6D | 90.741 | 54 | 2 | 2 | 5165 | 5215 | 465968910 | 465968857 | 1.190000e-07 | 69.4 |
77 | TraesCS2B01G339600 | chr6D | 95.349 | 43 | 0 | 1 | 5169 | 5209 | 91072571 | 91072613 | 4.280000e-07 | 67.6 |
78 | TraesCS2B01G339600 | chr6D | 91.837 | 49 | 0 | 3 | 5164 | 5209 | 178131343 | 178131390 | 1.540000e-06 | 65.8 |
79 | TraesCS2B01G339600 | chr6D | 90.196 | 51 | 1 | 3 | 5164 | 5211 | 18498606 | 18498557 | 5.540000e-06 | 63.9 |
80 | TraesCS2B01G339600 | chr6D | 91.667 | 48 | 0 | 3 | 5165 | 5209 | 422327456 | 422327410 | 5.540000e-06 | 63.9 |
81 | TraesCS2B01G339600 | chr6D | 89.796 | 49 | 1 | 3 | 5164 | 5209 | 808255 | 808302 | 7.160000e-05 | 60.2 |
82 | TraesCS2B01G339600 | chr7A | 88.462 | 442 | 42 | 5 | 3202 | 3643 | 442268915 | 442268483 | 5.870000e-145 | 525.0 |
83 | TraesCS2B01G339600 | chr7A | 92.453 | 53 | 1 | 2 | 5165 | 5214 | 430324230 | 430324282 | 9.200000e-09 | 73.1 |
84 | TraesCS2B01G339600 | chr6A | 84.630 | 540 | 69 | 9 | 323 | 851 | 269006921 | 269006385 | 5.870000e-145 | 525.0 |
85 | TraesCS2B01G339600 | chr6A | 92.453 | 53 | 1 | 3 | 5164 | 5214 | 131446725 | 131446674 | 9.200000e-09 | 73.1 |
86 | TraesCS2B01G339600 | chr5B | 85.356 | 519 | 61 | 11 | 323 | 835 | 38243717 | 38244226 | 2.110000e-144 | 523.0 |
87 | TraesCS2B01G339600 | chr5B | 92.453 | 53 | 0 | 3 | 5164 | 5213 | 625959512 | 625959563 | 9.200000e-09 | 73.1 |
88 | TraesCS2B01G339600 | chr1B | 87.029 | 239 | 22 | 7 | 323 | 560 | 436745114 | 436744884 | 1.830000e-65 | 261.0 |
89 | TraesCS2B01G339600 | chr4B | 92.593 | 162 | 11 | 1 | 4286 | 4447 | 178081258 | 178081098 | 1.430000e-56 | 231.0 |
90 | TraesCS2B01G339600 | chr6B | 88.083 | 193 | 17 | 6 | 4260 | 4449 | 192059928 | 192060117 | 2.400000e-54 | 224.0 |
91 | TraesCS2B01G339600 | chr6B | 95.833 | 48 | 0 | 1 | 5166 | 5211 | 195461905 | 195461858 | 7.110000e-10 | 76.8 |
92 | TraesCS2B01G339600 | chrUn | 93.878 | 49 | 1 | 1 | 5165 | 5211 | 50416619 | 50416667 | 9.200000e-09 | 73.1 |
93 | TraesCS2B01G339600 | chrUn | 90.000 | 50 | 1 | 3 | 5164 | 5210 | 253751781 | 253751733 | 1.990000e-05 | 62.1 |
94 | TraesCS2B01G339600 | chrUn | 91.304 | 46 | 0 | 3 | 5168 | 5210 | 83375482 | 83375438 | 7.160000e-05 | 60.2 |
95 | TraesCS2B01G339600 | chrUn | 92.857 | 42 | 0 | 2 | 5171 | 5210 | 8484381 | 8484341 | 2.580000e-04 | 58.4 |
96 | TraesCS2B01G339600 | chrUn | 89.583 | 48 | 1 | 2 | 5165 | 5209 | 8484394 | 8484440 | 2.580000e-04 | 58.4 |
97 | TraesCS2B01G339600 | chrUn | 92.500 | 40 | 0 | 3 | 5171 | 5208 | 37406898 | 37406860 | 3.000000e-03 | 54.7 |
98 | TraesCS2B01G339600 | chrUn | 100.000 | 28 | 0 | 0 | 5182 | 5209 | 155121163 | 155121190 | 1.200000e-02 | 52.8 |
99 | TraesCS2B01G339600 | chrUn | 100.000 | 28 | 0 | 0 | 5182 | 5209 | 164264012 | 164263985 | 1.200000e-02 | 52.8 |
100 | TraesCS2B01G339600 | chrUn | 100.000 | 28 | 0 | 0 | 5182 | 5209 | 323124607 | 323124580 | 1.200000e-02 | 52.8 |
101 | TraesCS2B01G339600 | chr4A | 92.453 | 53 | 0 | 3 | 5163 | 5212 | 624117337 | 624117286 | 9.200000e-09 | 73.1 |
These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.
query | scaffold | start | end | length | rev.comp | avg.bitscore | max.bitscore | avg.percent.identical | query.start | query.end | num_hsp | groupid | homo_length | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS2B01G339600 | chr2B | 484928848 | 484935459 | 6611 | True | 6165.000000 | 12211 | 98.571500 | 1 | 6612 | 2 | chr2B.!!$R3 | 6611 |
1 | TraesCS2B01G339600 | chr2B | 5335633 | 5336143 | 510 | True | 531.000000 | 531 | 85.549000 | 323 | 835 | 1 | chr2B.!!$R1 | 512 |
2 | TraesCS2B01G339600 | chr2B | 96618728 | 96619233 | 505 | False | 514.000000 | 514 | 85.192000 | 323 | 835 | 1 | chr2B.!!$F1 | 512 |
3 | TraesCS2B01G339600 | chr2D | 410407426 | 410413095 | 5669 | True | 2019.000000 | 2700 | 92.833250 | 851 | 6468 | 4 | chr2D.!!$R3 | 5617 |
4 | TraesCS2B01G339600 | chr2D | 380416534 | 380417279 | 745 | True | 881.000000 | 881 | 88.503000 | 2920 | 3643 | 1 | chr2D.!!$R1 | 723 |
5 | TraesCS2B01G339600 | chr2D | 307862465 | 307863257 | 792 | True | 615.000000 | 784 | 92.542000 | 1 | 854 | 2 | chr2D.!!$R2 | 853 |
6 | TraesCS2B01G339600 | chr2A | 515951648 | 515952393 | 745 | True | 893.000000 | 893 | 88.770000 | 2920 | 3643 | 1 | chr2A.!!$R2 | 723 |
7 | TraesCS2B01G339600 | chr2A | 578383157 | 578394098 | 10941 | True | 878.522222 | 1663 | 92.929222 | 851 | 6496 | 9 | chr2A.!!$R4 | 5645 |
8 | TraesCS2B01G339600 | chr2A | 608904734 | 608905536 | 802 | True | 594.500000 | 778 | 91.354500 | 1 | 852 | 2 | chr2A.!!$R5 | 851 |
9 | TraesCS2B01G339600 | chr4D | 303077861 | 303078535 | 674 | True | 743.000000 | 743 | 87.059000 | 2920 | 3577 | 1 | chr4D.!!$R2 | 657 |
10 | TraesCS2B01G339600 | chr4D | 106743695 | 106744482 | 787 | False | 652.500000 | 830 | 94.251500 | 1 | 851 | 2 | chr4D.!!$F3 | 850 |
11 | TraesCS2B01G339600 | chr4D | 417360765 | 417361844 | 1079 | True | 270.250000 | 374 | 87.075500 | 1627 | 2784 | 4 | chr4D.!!$R4 | 1157 |
12 | TraesCS2B01G339600 | chr7D | 369457277 | 369457998 | 721 | False | 784.000000 | 784 | 86.767000 | 2921 | 3629 | 1 | chr7D.!!$F2 | 708 |
13 | TraesCS2B01G339600 | chr1D | 194673771 | 194674510 | 739 | False | 760.000000 | 760 | 85.830000 | 2920 | 3631 | 1 | chr1D.!!$F2 | 711 |
14 | TraesCS2B01G339600 | chr3B | 73995600 | 73996328 | 728 | True | 364.000000 | 725 | 91.501000 | 1 | 851 | 3 | chr3B.!!$R3 | 850 |
15 | TraesCS2B01G339600 | chr3A | 733268896 | 733269595 | 699 | False | 587.000000 | 715 | 94.065000 | 1 | 766 | 2 | chr3A.!!$F2 | 765 |
16 | TraesCS2B01G339600 | chr7B | 304123003 | 304123725 | 722 | True | 699.000000 | 699 | 84.247000 | 2920 | 3643 | 1 | chr7B.!!$R2 | 723 |
17 | TraesCS2B01G339600 | chr7B | 692314181 | 692314718 | 537 | False | 481.000000 | 481 | 83.704000 | 323 | 833 | 1 | chr7B.!!$F1 | 510 |
18 | TraesCS2B01G339600 | chr3D | 39531603 | 39532290 | 687 | True | 575.000000 | 575 | 81.974000 | 2920 | 3609 | 1 | chr3D.!!$R1 | 689 |
19 | TraesCS2B01G339600 | chr6D | 194265537 | 194266073 | 536 | True | 564.000000 | 564 | 85.926000 | 323 | 851 | 1 | chr6D.!!$R2 | 528 |
20 | TraesCS2B01G339600 | chr6A | 269006385 | 269006921 | 536 | True | 525.000000 | 525 | 84.630000 | 323 | 851 | 1 | chr6A.!!$R2 | 528 |
21 | TraesCS2B01G339600 | chr5B | 38243717 | 38244226 | 509 | False | 523.000000 | 523 | 85.356000 | 323 | 835 | 1 | chr5B.!!$F1 | 512 |
AutoCloner calculated primer pairsThese primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
844 | 903 | 0.498095 | CGCAACAACGTCAACAATGC | 59.502 | 50.0 | 0.00 | 0.00 | 0.00 | 3.56 | F |
1949 | 2266 | 0.250166 | ACTTGCCCGAGTACACAACC | 60.250 | 55.0 | 0.00 | 0.00 | 0.00 | 3.77 | F |
3143 | 4276 | 0.317854 | CGTTCTCTGTGACGAGTGCA | 60.318 | 55.0 | 0.00 | 0.00 | 32.83 | 4.57 | F |
3220 | 4355 | 0.737715 | GCTGAGTGTTGGCCGACTAG | 60.738 | 60.0 | 23.87 | 16.26 | 0.00 | 2.57 | F |
3617 | 6827 | 0.909623 | TCTAGCCTACCCCAACTTGC | 59.090 | 55.0 | 0.00 | 0.00 | 0.00 | 4.01 | F |
5210 | 8623 | 0.115745 | TTGGGACGGAGGGAGTACTT | 59.884 | 55.0 | 0.00 | 0.00 | 0.00 | 2.24 | F |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
2100 | 2563 | 0.249447 | TGTCAGAACAGGTCAGCACG | 60.249 | 55.0 | 0.00 | 0.00 | 0.0 | 5.34 | R |
3530 | 6740 | 0.870307 | ATAGCTAACTTCCACGCGCG | 60.870 | 55.0 | 30.96 | 30.96 | 0.0 | 6.86 | R |
4154 | 7505 | 0.963355 | TGCCAGGTTAAATCACGCCC | 60.963 | 55.0 | 0.00 | 0.00 | 0.0 | 6.13 | R |
5190 | 8603 | 0.115745 | AGTACTCCCTCCGTCCCAAA | 59.884 | 55.0 | 0.00 | 0.00 | 0.0 | 3.28 | R |
5243 | 8656 | 0.107456 | AGGGCACGCTATCCAGATTG | 59.893 | 55.0 | 0.00 | 0.00 | 0.0 | 2.67 | R |
6504 | 12328 | 0.104120 | CCGCCTGTAATCGTCCATGA | 59.896 | 55.0 | 0.00 | 0.00 | 0.0 | 3.07 | R |
All possible primersListed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
52 | 53 | 5.294306 | TCATTCTCGTTTTAGCATGCTTAGG | 59.706 | 40.000 | 28.02 | 16.43 | 0.00 | 2.69 |
63 | 64 | 8.882415 | TTTAGCATGCTTAGGTATTAGTACAC | 57.118 | 34.615 | 28.02 | 0.00 | 32.25 | 2.90 |
174 | 184 | 8.388103 | GTGATGTGTAGTTATGTGTGGTATTTC | 58.612 | 37.037 | 0.00 | 0.00 | 0.00 | 2.17 |
203 | 213 | 8.967664 | AAACAAGTGGTGTGTACTAAAGATTA | 57.032 | 30.769 | 0.00 | 0.00 | 40.60 | 1.75 |
212 | 222 | 8.598075 | GGTGTGTACTAAAGATTATTGTTACCG | 58.402 | 37.037 | 0.00 | 0.00 | 0.00 | 4.02 |
214 | 224 | 7.818446 | TGTGTACTAAAGATTATTGTTACCGCA | 59.182 | 33.333 | 0.00 | 0.00 | 0.00 | 5.69 |
253 | 263 | 3.954258 | ACCTCTTTTGTTGGAAAGGTCAG | 59.046 | 43.478 | 0.00 | 0.00 | 37.27 | 3.51 |
254 | 264 | 3.954258 | CCTCTTTTGTTGGAAAGGTCAGT | 59.046 | 43.478 | 0.00 | 0.00 | 37.27 | 3.41 |
255 | 265 | 5.130350 | CCTCTTTTGTTGGAAAGGTCAGTA | 58.870 | 41.667 | 0.00 | 0.00 | 37.27 | 2.74 |
256 | 266 | 5.592688 | CCTCTTTTGTTGGAAAGGTCAGTAA | 59.407 | 40.000 | 0.00 | 0.00 | 37.27 | 2.24 |
257 | 267 | 6.265422 | CCTCTTTTGTTGGAAAGGTCAGTAAT | 59.735 | 38.462 | 0.00 | 0.00 | 37.27 | 1.89 |
258 | 268 | 7.447238 | CCTCTTTTGTTGGAAAGGTCAGTAATA | 59.553 | 37.037 | 0.00 | 0.00 | 37.27 | 0.98 |
259 | 269 | 8.934023 | TCTTTTGTTGGAAAGGTCAGTAATAT | 57.066 | 30.769 | 0.00 | 0.00 | 37.27 | 1.28 |
260 | 270 | 9.362151 | TCTTTTGTTGGAAAGGTCAGTAATATT | 57.638 | 29.630 | 0.00 | 0.00 | 37.27 | 1.28 |
261 | 271 | 9.981114 | CTTTTGTTGGAAAGGTCAGTAATATTT | 57.019 | 29.630 | 0.00 | 0.00 | 33.90 | 1.40 |
262 | 272 | 9.757227 | TTTTGTTGGAAAGGTCAGTAATATTTG | 57.243 | 29.630 | 0.00 | 0.00 | 0.00 | 2.32 |
263 | 273 | 8.472007 | TTGTTGGAAAGGTCAGTAATATTTGT | 57.528 | 30.769 | 0.00 | 0.00 | 0.00 | 2.83 |
264 | 274 | 8.472007 | TGTTGGAAAGGTCAGTAATATTTGTT | 57.528 | 30.769 | 0.00 | 0.00 | 0.00 | 2.83 |
265 | 275 | 8.919145 | TGTTGGAAAGGTCAGTAATATTTGTTT | 58.081 | 29.630 | 0.00 | 0.00 | 0.00 | 2.83 |
266 | 276 | 9.191995 | GTTGGAAAGGTCAGTAATATTTGTTTG | 57.808 | 33.333 | 0.00 | 0.00 | 0.00 | 2.93 |
267 | 277 | 8.472007 | TGGAAAGGTCAGTAATATTTGTTTGT | 57.528 | 30.769 | 0.00 | 0.00 | 0.00 | 2.83 |
268 | 278 | 8.919145 | TGGAAAGGTCAGTAATATTTGTTTGTT | 58.081 | 29.630 | 0.00 | 0.00 | 0.00 | 2.83 |
269 | 279 | 9.758651 | GGAAAGGTCAGTAATATTTGTTTGTTT | 57.241 | 29.630 | 0.00 | 0.00 | 0.00 | 2.83 |
273 | 283 | 9.528018 | AGGTCAGTAATATTTGTTTGTTTTGTG | 57.472 | 29.630 | 0.00 | 0.00 | 0.00 | 3.33 |
274 | 284 | 9.308318 | GGTCAGTAATATTTGTTTGTTTTGTGT | 57.692 | 29.630 | 0.00 | 0.00 | 0.00 | 3.72 |
281 | 291 | 9.617975 | AATATTTGTTTGTTTTGTGTTTGGTTG | 57.382 | 25.926 | 0.00 | 0.00 | 0.00 | 3.77 |
282 | 292 | 6.436843 | TTTGTTTGTTTTGTGTTTGGTTGT | 57.563 | 29.167 | 0.00 | 0.00 | 0.00 | 3.32 |
283 | 293 | 7.548196 | TTTGTTTGTTTTGTGTTTGGTTGTA | 57.452 | 28.000 | 0.00 | 0.00 | 0.00 | 2.41 |
284 | 294 | 7.730364 | TTGTTTGTTTTGTGTTTGGTTGTAT | 57.270 | 28.000 | 0.00 | 0.00 | 0.00 | 2.29 |
285 | 295 | 7.121974 | TGTTTGTTTTGTGTTTGGTTGTATG | 57.878 | 32.000 | 0.00 | 0.00 | 0.00 | 2.39 |
286 | 296 | 6.147821 | TGTTTGTTTTGTGTTTGGTTGTATGG | 59.852 | 34.615 | 0.00 | 0.00 | 0.00 | 2.74 |
287 | 297 | 5.407407 | TGTTTTGTGTTTGGTTGTATGGT | 57.593 | 34.783 | 0.00 | 0.00 | 0.00 | 3.55 |
288 | 298 | 5.794894 | TGTTTTGTGTTTGGTTGTATGGTT | 58.205 | 33.333 | 0.00 | 0.00 | 0.00 | 3.67 |
289 | 299 | 6.231211 | TGTTTTGTGTTTGGTTGTATGGTTT | 58.769 | 32.000 | 0.00 | 0.00 | 0.00 | 3.27 |
290 | 300 | 6.369065 | TGTTTTGTGTTTGGTTGTATGGTTTC | 59.631 | 34.615 | 0.00 | 0.00 | 0.00 | 2.78 |
291 | 301 | 4.294416 | TGTGTTTGGTTGTATGGTTTCG | 57.706 | 40.909 | 0.00 | 0.00 | 0.00 | 3.46 |
292 | 302 | 3.945921 | TGTGTTTGGTTGTATGGTTTCGA | 59.054 | 39.130 | 0.00 | 0.00 | 0.00 | 3.71 |
293 | 303 | 4.580995 | TGTGTTTGGTTGTATGGTTTCGAT | 59.419 | 37.500 | 0.00 | 0.00 | 0.00 | 3.59 |
294 | 304 | 5.763698 | TGTGTTTGGTTGTATGGTTTCGATA | 59.236 | 36.000 | 0.00 | 0.00 | 0.00 | 2.92 |
295 | 305 | 6.262496 | TGTGTTTGGTTGTATGGTTTCGATAA | 59.738 | 34.615 | 0.00 | 0.00 | 0.00 | 1.75 |
296 | 306 | 6.799925 | GTGTTTGGTTGTATGGTTTCGATAAG | 59.200 | 38.462 | 0.00 | 0.00 | 0.00 | 1.73 |
297 | 307 | 6.711194 | TGTTTGGTTGTATGGTTTCGATAAGA | 59.289 | 34.615 | 0.00 | 0.00 | 0.00 | 2.10 |
298 | 308 | 7.392113 | TGTTTGGTTGTATGGTTTCGATAAGAT | 59.608 | 33.333 | 0.00 | 0.00 | 0.00 | 2.40 |
299 | 309 | 7.548196 | TTGGTTGTATGGTTTCGATAAGATC | 57.452 | 36.000 | 0.00 | 0.00 | 0.00 | 2.75 |
300 | 310 | 6.884832 | TGGTTGTATGGTTTCGATAAGATCT | 58.115 | 36.000 | 0.00 | 0.00 | 0.00 | 2.75 |
301 | 311 | 7.335627 | TGGTTGTATGGTTTCGATAAGATCTT | 58.664 | 34.615 | 13.56 | 13.56 | 0.00 | 2.40 |
302 | 312 | 7.827236 | TGGTTGTATGGTTTCGATAAGATCTTT | 59.173 | 33.333 | 14.36 | 1.45 | 0.00 | 2.52 |
303 | 313 | 8.122952 | GGTTGTATGGTTTCGATAAGATCTTTG | 58.877 | 37.037 | 14.36 | 4.56 | 0.00 | 2.77 |
304 | 314 | 8.665685 | GTTGTATGGTTTCGATAAGATCTTTGT | 58.334 | 33.333 | 14.36 | 2.85 | 0.00 | 2.83 |
305 | 315 | 8.786826 | TGTATGGTTTCGATAAGATCTTTGTT | 57.213 | 30.769 | 14.36 | 0.00 | 0.00 | 2.83 |
306 | 316 | 8.664798 | TGTATGGTTTCGATAAGATCTTTGTTG | 58.335 | 33.333 | 14.36 | 7.30 | 0.00 | 3.33 |
307 | 317 | 7.687941 | ATGGTTTCGATAAGATCTTTGTTGT | 57.312 | 32.000 | 14.36 | 0.00 | 0.00 | 3.32 |
308 | 318 | 7.504924 | TGGTTTCGATAAGATCTTTGTTGTT | 57.495 | 32.000 | 14.36 | 0.00 | 0.00 | 2.83 |
309 | 319 | 7.359595 | TGGTTTCGATAAGATCTTTGTTGTTG | 58.640 | 34.615 | 14.36 | 0.16 | 0.00 | 3.33 |
310 | 320 | 6.801862 | GGTTTCGATAAGATCTTTGTTGTTGG | 59.198 | 38.462 | 14.36 | 0.00 | 0.00 | 3.77 |
311 | 321 | 7.308348 | GGTTTCGATAAGATCTTTGTTGTTGGA | 60.308 | 37.037 | 14.36 | 0.00 | 0.00 | 3.53 |
312 | 322 | 7.737972 | TTCGATAAGATCTTTGTTGTTGGAA | 57.262 | 32.000 | 14.36 | 4.22 | 0.00 | 3.53 |
313 | 323 | 7.737972 | TCGATAAGATCTTTGTTGTTGGAAA | 57.262 | 32.000 | 14.36 | 0.00 | 0.00 | 3.13 |
314 | 324 | 7.806690 | TCGATAAGATCTTTGTTGTTGGAAAG | 58.193 | 34.615 | 14.36 | 0.00 | 0.00 | 2.62 |
315 | 325 | 7.659799 | TCGATAAGATCTTTGTTGTTGGAAAGA | 59.340 | 33.333 | 14.36 | 0.00 | 41.29 | 2.52 |
316 | 326 | 8.454106 | CGATAAGATCTTTGTTGTTGGAAAGAT | 58.546 | 33.333 | 14.36 | 0.00 | 46.72 | 2.40 |
450 | 469 | 7.867403 | TGCATGTTTTGAGAAGGAATCTTTTAC | 59.133 | 33.333 | 0.00 | 0.00 | 38.96 | 2.01 |
835 | 890 | 0.669077 | TAAAATGGGCGCAACAACGT | 59.331 | 45.000 | 10.83 | 0.00 | 34.88 | 3.99 |
844 | 903 | 0.498095 | CGCAACAACGTCAACAATGC | 59.502 | 50.000 | 0.00 | 0.00 | 0.00 | 3.56 |
885 | 944 | 1.648467 | GGCGCCCTTTGCTACAGAAG | 61.648 | 60.000 | 18.11 | 0.00 | 38.05 | 2.85 |
901 | 960 | 1.346068 | AGAAGGCGGCTTCTGGATATC | 59.654 | 52.381 | 42.76 | 21.75 | 41.61 | 1.63 |
1455 | 1515 | 4.125703 | GTGGATGCAGGTAAAGAGATCAG | 58.874 | 47.826 | 0.00 | 0.00 | 0.00 | 2.90 |
1470 | 1530 | 6.142818 | AGAGATCAGTCCTTTTCGTCTATG | 57.857 | 41.667 | 0.00 | 0.00 | 0.00 | 2.23 |
1512 | 1580 | 2.814336 | ACAGCTGCTTAGGTTGTTTAGC | 59.186 | 45.455 | 15.27 | 0.00 | 0.00 | 3.09 |
1608 | 1676 | 4.996122 | TGGTGTCATTTCCATGATTTTTGC | 59.004 | 37.500 | 0.00 | 0.00 | 41.64 | 3.68 |
1610 | 1678 | 5.644636 | GGTGTCATTTCCATGATTTTTGCAT | 59.355 | 36.000 | 0.00 | 0.00 | 41.64 | 3.96 |
1715 | 1783 | 8.523915 | TTGCTAGATCATGTGGATGTTTTAAT | 57.476 | 30.769 | 0.00 | 0.00 | 36.00 | 1.40 |
1800 | 1869 | 9.026074 | GTGAAGCAATTCTATAGAGAACTGTAC | 57.974 | 37.037 | 9.98 | 3.54 | 44.50 | 2.90 |
1813 | 1882 | 3.387050 | AGAACTGTACTCAGAAACGGGTT | 59.613 | 43.478 | 2.17 | 0.00 | 43.76 | 4.11 |
1816 | 1885 | 3.893813 | ACTGTACTCAGAAACGGGTTAGT | 59.106 | 43.478 | 2.17 | 0.00 | 43.76 | 2.24 |
1895 | 2212 | 8.627487 | TGTATAAATAGCTTTTGAAAATGGCG | 57.373 | 30.769 | 0.00 | 0.00 | 0.00 | 5.69 |
1904 | 2221 | 2.679355 | TGAAAATGGCGAACTTCACG | 57.321 | 45.000 | 0.00 | 0.00 | 0.00 | 4.35 |
1912 | 2229 | 2.988493 | TGGCGAACTTCACGTGTTATAC | 59.012 | 45.455 | 16.51 | 5.22 | 0.00 | 1.47 |
1916 | 2233 | 4.625135 | CGAACTTCACGTGTTATACTTGC | 58.375 | 43.478 | 16.51 | 0.00 | 0.00 | 4.01 |
1937 | 2254 | 3.190744 | GCTTTAACCAACTAGACTTGCCC | 59.809 | 47.826 | 0.00 | 0.00 | 0.00 | 5.36 |
1944 | 2261 | 2.211250 | ACTAGACTTGCCCGAGTACA | 57.789 | 50.000 | 0.00 | 0.00 | 0.00 | 2.90 |
1949 | 2266 | 0.250166 | ACTTGCCCGAGTACACAACC | 60.250 | 55.000 | 0.00 | 0.00 | 0.00 | 3.77 |
1955 | 2272 | 1.668047 | CCCGAGTACACAACCGAAGAC | 60.668 | 57.143 | 0.00 | 0.00 | 0.00 | 3.01 |
1959 | 2422 | 1.145803 | GTACACAACCGAAGACCAGC | 58.854 | 55.000 | 0.00 | 0.00 | 0.00 | 4.85 |
1962 | 2425 | 0.951040 | CACAACCGAAGACCAGCTCC | 60.951 | 60.000 | 0.00 | 0.00 | 0.00 | 4.70 |
1965 | 2428 | 1.122019 | AACCGAAGACCAGCTCCAGT | 61.122 | 55.000 | 0.00 | 0.00 | 0.00 | 4.00 |
1969 | 2432 | 1.819288 | CGAAGACCAGCTCCAGTAGAA | 59.181 | 52.381 | 0.00 | 0.00 | 0.00 | 2.10 |
1983 | 2446 | 6.372937 | GCTCCAGTAGAAGTTGCTATTTTCTT | 59.627 | 38.462 | 3.95 | 0.00 | 33.51 | 2.52 |
1986 | 2449 | 9.787435 | TCCAGTAGAAGTTGCTATTTTCTTTTA | 57.213 | 29.630 | 3.95 | 0.00 | 33.51 | 1.52 |
2016 | 2479 | 3.592898 | AATGAAGGTTTTGGATTCGGC | 57.407 | 42.857 | 0.00 | 0.00 | 0.00 | 5.54 |
2022 | 2485 | 2.014857 | GGTTTTGGATTCGGCTAGTCC | 58.985 | 52.381 | 0.00 | 0.00 | 0.00 | 3.85 |
2038 | 2501 | 2.262637 | AGTCCGTCCTTCCCACAATTA | 58.737 | 47.619 | 0.00 | 0.00 | 0.00 | 1.40 |
2053 | 2516 | 0.457035 | AATTATGCTTGCACTGCCGG | 59.543 | 50.000 | 0.00 | 0.00 | 0.00 | 6.13 |
2098 | 2561 | 4.040068 | GCAATAGGCGAGCAGGAG | 57.960 | 61.111 | 0.00 | 0.00 | 0.00 | 3.69 |
2100 | 2563 | 1.596477 | CAATAGGCGAGCAGGAGGC | 60.596 | 63.158 | 0.00 | 0.00 | 45.30 | 4.70 |
2133 | 2596 | 3.350219 | TCTGACAGCCTACAAAATCCC | 57.650 | 47.619 | 0.00 | 0.00 | 0.00 | 3.85 |
2142 | 2605 | 3.945921 | GCCTACAAAATCCCACTAGTTCC | 59.054 | 47.826 | 0.00 | 0.00 | 0.00 | 3.62 |
2146 | 2609 | 3.010250 | ACAAAATCCCACTAGTTCCCCTC | 59.990 | 47.826 | 0.00 | 0.00 | 0.00 | 4.30 |
2155 | 2618 | 1.271840 | TAGTTCCCCTCGCCAGCATT | 61.272 | 55.000 | 0.00 | 0.00 | 0.00 | 3.56 |
2214 | 2834 | 2.034179 | TCGTTCAGCCTGTATCATACCG | 59.966 | 50.000 | 0.00 | 0.00 | 0.00 | 4.02 |
2226 | 2846 | 5.676552 | TGTATCATACCGCAAACCAGTTAT | 58.323 | 37.500 | 0.00 | 0.00 | 0.00 | 1.89 |
2244 | 2864 | 2.775911 | ATTACAGAGAGCTTGCAGCA | 57.224 | 45.000 | 10.16 | 0.00 | 45.56 | 4.41 |
2254 | 2874 | 1.681666 | CTTGCAGCAAGGAGAGGGA | 59.318 | 57.895 | 25.40 | 0.00 | 37.77 | 4.20 |
2255 | 2875 | 0.676151 | CTTGCAGCAAGGAGAGGGAC | 60.676 | 60.000 | 25.40 | 0.00 | 37.77 | 4.46 |
2265 | 2885 | 4.281941 | GCAAGGAGAGGGACTTTGAAAAAT | 59.718 | 41.667 | 0.00 | 0.00 | 41.55 | 1.82 |
2329 | 2949 | 3.599698 | AGTAGTTGGGGAGGACCTTAGTA | 59.400 | 47.826 | 0.00 | 0.00 | 40.03 | 1.82 |
2366 | 2986 | 9.490379 | CTTACTTTGAATTTGTACTCTGGTAGT | 57.510 | 33.333 | 0.00 | 0.00 | 42.62 | 2.73 |
2372 | 2992 | 5.656213 | ATTTGTACTCTGGTAGTAGCGTT | 57.344 | 39.130 | 0.00 | 0.00 | 41.42 | 4.84 |
2439 | 3059 | 6.183361 | TGTGTCCTGTCTTGGGTAGAAAATTA | 60.183 | 38.462 | 0.00 | 0.00 | 33.81 | 1.40 |
2447 | 3067 | 5.766174 | TCTTGGGTAGAAAATTACGTGCTTT | 59.234 | 36.000 | 0.00 | 0.00 | 0.00 | 3.51 |
2471 | 3091 | 2.495270 | TGCACTTGGCTTGAGTTTTGAA | 59.505 | 40.909 | 0.00 | 0.00 | 45.15 | 2.69 |
2472 | 3092 | 3.056250 | TGCACTTGGCTTGAGTTTTGAAA | 60.056 | 39.130 | 0.00 | 0.00 | 45.15 | 2.69 |
2475 | 3095 | 4.746611 | CACTTGGCTTGAGTTTTGAAATCC | 59.253 | 41.667 | 0.00 | 0.00 | 0.00 | 3.01 |
2642 | 3763 | 9.177608 | TGTGCTATGTAATGATTAGCTTTCTTT | 57.822 | 29.630 | 0.00 | 0.00 | 39.24 | 2.52 |
2785 | 3909 | 0.865769 | CGTGTAGGCTGTGGACAAAC | 59.134 | 55.000 | 0.00 | 0.00 | 0.00 | 2.93 |
2918 | 4043 | 4.762765 | TGGCAACATATTCGTTTTAGTGGT | 59.237 | 37.500 | 0.00 | 0.00 | 46.17 | 4.16 |
2932 | 4057 | 4.445452 | TTAGTGGTGGCTTAGTAGAACG | 57.555 | 45.455 | 0.00 | 0.00 | 0.00 | 3.95 |
3084 | 4213 | 1.137675 | CGATGAAGATGTGAGCCCTCA | 59.862 | 52.381 | 0.00 | 0.00 | 37.24 | 3.86 |
3143 | 4276 | 0.317854 | CGTTCTCTGTGACGAGTGCA | 60.318 | 55.000 | 0.00 | 0.00 | 32.83 | 4.57 |
3220 | 4355 | 0.737715 | GCTGAGTGTTGGCCGACTAG | 60.738 | 60.000 | 23.87 | 16.26 | 0.00 | 2.57 |
3255 | 4390 | 5.160607 | TCAACAATTAGGTGTAGTGGAGG | 57.839 | 43.478 | 0.00 | 0.00 | 35.97 | 4.30 |
3277 | 4412 | 2.283298 | ACGCATGTTGAGATGGATGTC | 58.717 | 47.619 | 0.00 | 0.00 | 0.00 | 3.06 |
3284 | 4419 | 1.288188 | TGAGATGGATGTCTGGCCAA | 58.712 | 50.000 | 7.01 | 0.00 | 37.78 | 4.52 |
3339 | 4474 | 1.656587 | TGAGTGAGTTGGGGTAGCAT | 58.343 | 50.000 | 0.00 | 0.00 | 0.00 | 3.79 |
3368 | 4503 | 1.129437 | GAGAAGCTTGTCCAACATCGC | 59.871 | 52.381 | 12.50 | 0.00 | 0.00 | 4.58 |
3394 | 4529 | 9.559732 | CCTAAGATGATTTGGACATATACAACA | 57.440 | 33.333 | 0.00 | 0.00 | 0.00 | 3.33 |
3407 | 6608 | 2.107950 | TACAACACAGGTGCATAGCC | 57.892 | 50.000 | 0.00 | 0.00 | 0.00 | 3.93 |
3530 | 6740 | 2.409948 | AGAACTAGCCATGGACAAGC | 57.590 | 50.000 | 18.40 | 0.00 | 0.00 | 4.01 |
3617 | 6827 | 0.909623 | TCTAGCCTACCCCAACTTGC | 59.090 | 55.000 | 0.00 | 0.00 | 0.00 | 4.01 |
3645 | 6855 | 8.331740 | TGGAACTAAAGGCTTAGTAGTAGTAGA | 58.668 | 37.037 | 11.06 | 0.00 | 45.75 | 2.59 |
3646 | 6856 | 8.620416 | GGAACTAAAGGCTTAGTAGTAGTAGAC | 58.380 | 40.741 | 11.06 | 5.95 | 45.75 | 2.59 |
3647 | 6857 | 9.394767 | GAACTAAAGGCTTAGTAGTAGTAGACT | 57.605 | 37.037 | 11.06 | 0.00 | 45.75 | 3.24 |
4154 | 7505 | 8.893727 | CAGTATCCCCTCAGTTTATTTTTGTAG | 58.106 | 37.037 | 0.00 | 0.00 | 0.00 | 2.74 |
4176 | 7527 | 1.742831 | GCGTGATTTAACCTGGCATGA | 59.257 | 47.619 | 0.00 | 0.00 | 0.00 | 3.07 |
4196 | 7547 | 6.402550 | GCATGATCACGTAGATTGAACTTTGT | 60.403 | 38.462 | 0.00 | 0.00 | 37.00 | 2.83 |
4280 | 7631 | 6.667414 | ACTTCCAAGCATGAATTTAATGGGTA | 59.333 | 34.615 | 0.00 | 0.00 | 0.00 | 3.69 |
4281 | 7632 | 7.180051 | ACTTCCAAGCATGAATTTAATGGGTAA | 59.820 | 33.333 | 0.00 | 0.00 | 0.00 | 2.85 |
4283 | 7634 | 6.667414 | TCCAAGCATGAATTTAATGGGTAACT | 59.333 | 34.615 | 0.00 | 0.00 | 0.00 | 2.24 |
4284 | 7635 | 7.836685 | TCCAAGCATGAATTTAATGGGTAACTA | 59.163 | 33.333 | 0.00 | 0.00 | 0.00 | 2.24 |
4300 | 7687 | 6.096846 | TGGGTAACTACTCCGTTCCTAAATAC | 59.903 | 42.308 | 0.00 | 0.00 | 0.00 | 1.89 |
4371 | 7780 | 8.354011 | AGACATATTTTACAGCGTAGATTCAC | 57.646 | 34.615 | 0.00 | 0.00 | 0.00 | 3.18 |
4372 | 7781 | 8.198109 | AGACATATTTTACAGCGTAGATTCACT | 58.802 | 33.333 | 0.00 | 0.00 | 0.00 | 3.41 |
4373 | 7782 | 8.354011 | ACATATTTTACAGCGTAGATTCACTC | 57.646 | 34.615 | 0.00 | 0.00 | 0.00 | 3.51 |
4374 | 7783 | 7.979537 | ACATATTTTACAGCGTAGATTCACTCA | 59.020 | 33.333 | 0.00 | 0.00 | 0.00 | 3.41 |
4375 | 7784 | 8.982685 | CATATTTTACAGCGTAGATTCACTCAT | 58.017 | 33.333 | 0.00 | 0.00 | 0.00 | 2.90 |
4376 | 7785 | 7.849804 | ATTTTACAGCGTAGATTCACTCATT | 57.150 | 32.000 | 0.00 | 0.00 | 0.00 | 2.57 |
4377 | 7786 | 7.667043 | TTTTACAGCGTAGATTCACTCATTT | 57.333 | 32.000 | 0.00 | 0.00 | 0.00 | 2.32 |
4378 | 7787 | 7.667043 | TTTACAGCGTAGATTCACTCATTTT | 57.333 | 32.000 | 0.00 | 0.00 | 0.00 | 1.82 |
4379 | 7788 | 5.536554 | ACAGCGTAGATTCACTCATTTTG | 57.463 | 39.130 | 0.00 | 0.00 | 0.00 | 2.44 |
4380 | 7789 | 4.142816 | ACAGCGTAGATTCACTCATTTTGC | 60.143 | 41.667 | 0.00 | 0.00 | 0.00 | 3.68 |
4381 | 7790 | 4.093998 | CAGCGTAGATTCACTCATTTTGCT | 59.906 | 41.667 | 0.00 | 0.00 | 0.00 | 3.91 |
4382 | 7791 | 4.331168 | AGCGTAGATTCACTCATTTTGCTC | 59.669 | 41.667 | 0.00 | 0.00 | 0.00 | 4.26 |
4383 | 7792 | 4.494855 | GCGTAGATTCACTCATTTTGCTCC | 60.495 | 45.833 | 0.00 | 0.00 | 0.00 | 4.70 |
4384 | 7793 | 4.259970 | CGTAGATTCACTCATTTTGCTCCG | 60.260 | 45.833 | 0.00 | 0.00 | 0.00 | 4.63 |
4385 | 7794 | 3.679389 | AGATTCACTCATTTTGCTCCGT | 58.321 | 40.909 | 0.00 | 0.00 | 0.00 | 4.69 |
4386 | 7795 | 4.832248 | AGATTCACTCATTTTGCTCCGTA | 58.168 | 39.130 | 0.00 | 0.00 | 0.00 | 4.02 |
4477 | 7886 | 2.704725 | TGCAAAGTTCGAATCTTGCC | 57.295 | 45.000 | 29.23 | 18.66 | 0.00 | 4.52 |
4532 | 7941 | 7.276658 | TGAGTAGTTTCTATTTTGACACACCA | 58.723 | 34.615 | 0.00 | 0.00 | 0.00 | 4.17 |
4551 | 7960 | 7.549488 | ACACACCAGCTGTTATCTTTTACTATC | 59.451 | 37.037 | 13.81 | 0.00 | 0.00 | 2.08 |
5011 | 8421 | 5.050091 | ACATCTTGTACTTTGAGTTCTTGCG | 60.050 | 40.000 | 0.00 | 0.00 | 0.00 | 4.85 |
5016 | 8426 | 7.439955 | TCTTGTACTTTGAGTTCTTGCGATTTA | 59.560 | 33.333 | 0.00 | 0.00 | 0.00 | 1.40 |
5021 | 8431 | 5.450376 | TTGAGTTCTTGCGATTTACGATC | 57.550 | 39.130 | 0.00 | 0.00 | 45.77 | 3.69 |
5094 | 8504 | 5.514914 | GTGGCAAATGTAACATTAACCATCG | 59.485 | 40.000 | 0.00 | 0.00 | 0.00 | 3.84 |
5099 | 8509 | 7.915397 | GCAAATGTAACATTAACCATCGATCTT | 59.085 | 33.333 | 0.00 | 0.00 | 0.00 | 2.40 |
5160 | 8573 | 6.536731 | CAATGCATTGTCTAGTACTCCATC | 57.463 | 41.667 | 27.81 | 0.00 | 33.22 | 3.51 |
5161 | 8574 | 4.307443 | TGCATTGTCTAGTACTCCATCG | 57.693 | 45.455 | 0.00 | 0.00 | 0.00 | 3.84 |
5162 | 8575 | 3.068165 | TGCATTGTCTAGTACTCCATCGG | 59.932 | 47.826 | 0.00 | 0.00 | 0.00 | 4.18 |
5164 | 8577 | 4.277672 | GCATTGTCTAGTACTCCATCGGTA | 59.722 | 45.833 | 0.00 | 0.00 | 0.00 | 4.02 |
5165 | 8578 | 5.221185 | GCATTGTCTAGTACTCCATCGGTAA | 60.221 | 44.000 | 0.00 | 0.00 | 0.00 | 2.85 |
5166 | 8579 | 6.682113 | GCATTGTCTAGTACTCCATCGGTAAA | 60.682 | 42.308 | 0.00 | 0.00 | 0.00 | 2.01 |
5167 | 8580 | 6.446781 | TTGTCTAGTACTCCATCGGTAAAG | 57.553 | 41.667 | 0.00 | 0.00 | 0.00 | 1.85 |
5171 | 8584 | 5.948162 | TCTAGTACTCCATCGGTAAAGTTGT | 59.052 | 40.000 | 0.00 | 0.00 | 0.00 | 3.32 |
5172 | 8585 | 7.066284 | GTCTAGTACTCCATCGGTAAAGTTGTA | 59.934 | 40.741 | 0.00 | 0.00 | 0.00 | 2.41 |
5173 | 8586 | 5.958955 | AGTACTCCATCGGTAAAGTTGTAC | 58.041 | 41.667 | 0.00 | 0.00 | 0.00 | 2.90 |
5174 | 8587 | 5.713861 | AGTACTCCATCGGTAAAGTTGTACT | 59.286 | 40.000 | 0.00 | 0.00 | 34.96 | 2.73 |
5175 | 8588 | 6.886459 | AGTACTCCATCGGTAAAGTTGTACTA | 59.114 | 38.462 | 0.00 | 0.00 | 37.08 | 1.82 |
5176 | 8589 | 6.594788 | ACTCCATCGGTAAAGTTGTACTAA | 57.405 | 37.500 | 0.00 | 0.00 | 0.00 | 2.24 |
5177 | 8590 | 6.996509 | ACTCCATCGGTAAAGTTGTACTAAA | 58.003 | 36.000 | 0.00 | 0.00 | 0.00 | 1.85 |
5178 | 8591 | 7.095270 | ACTCCATCGGTAAAGTTGTACTAAAG | 58.905 | 38.462 | 0.00 | 0.00 | 0.00 | 1.85 |
5179 | 8592 | 6.996509 | TCCATCGGTAAAGTTGTACTAAAGT | 58.003 | 36.000 | 0.00 | 0.00 | 0.00 | 2.66 |
5180 | 8593 | 7.444299 | TCCATCGGTAAAGTTGTACTAAAGTT | 58.556 | 34.615 | 0.00 | 0.00 | 0.00 | 2.66 |
5181 | 8594 | 7.385752 | TCCATCGGTAAAGTTGTACTAAAGTTG | 59.614 | 37.037 | 0.00 | 0.00 | 0.00 | 3.16 |
5182 | 8595 | 7.385752 | CCATCGGTAAAGTTGTACTAAAGTTGA | 59.614 | 37.037 | 0.00 | 0.00 | 0.00 | 3.18 |
5183 | 8596 | 7.698836 | TCGGTAAAGTTGTACTAAAGTTGAC | 57.301 | 36.000 | 0.00 | 0.00 | 0.00 | 3.18 |
5184 | 8597 | 7.264221 | TCGGTAAAGTTGTACTAAAGTTGACA | 58.736 | 34.615 | 0.00 | 0.00 | 28.72 | 3.58 |
5185 | 8598 | 7.222611 | TCGGTAAAGTTGTACTAAAGTTGACAC | 59.777 | 37.037 | 0.00 | 0.00 | 28.72 | 3.67 |
5186 | 8599 | 7.223387 | CGGTAAAGTTGTACTAAAGTTGACACT | 59.777 | 37.037 | 0.00 | 0.00 | 28.72 | 3.55 |
5187 | 8600 | 8.886719 | GGTAAAGTTGTACTAAAGTTGACACTT | 58.113 | 33.333 | 0.00 | 0.00 | 45.89 | 3.16 |
5195 | 8608 | 8.842280 | TGTACTAAAGTTGACACTTATTTTGGG | 58.158 | 33.333 | 0.00 | 0.00 | 42.89 | 4.12 |
5196 | 8609 | 9.059260 | GTACTAAAGTTGACACTTATTTTGGGA | 57.941 | 33.333 | 0.00 | 0.00 | 42.89 | 4.37 |
5197 | 8610 | 7.937649 | ACTAAAGTTGACACTTATTTTGGGAC | 58.062 | 34.615 | 0.00 | 0.00 | 42.89 | 4.46 |
5198 | 8611 | 5.432885 | AAGTTGACACTTATTTTGGGACG | 57.567 | 39.130 | 0.00 | 0.00 | 41.81 | 4.79 |
5199 | 8612 | 3.818773 | AGTTGACACTTATTTTGGGACGG | 59.181 | 43.478 | 0.00 | 0.00 | 0.00 | 4.79 |
5200 | 8613 | 3.773418 | TGACACTTATTTTGGGACGGA | 57.227 | 42.857 | 0.00 | 0.00 | 0.00 | 4.69 |
5201 | 8614 | 3.670625 | TGACACTTATTTTGGGACGGAG | 58.329 | 45.455 | 0.00 | 0.00 | 0.00 | 4.63 |
5202 | 8615 | 3.007635 | GACACTTATTTTGGGACGGAGG | 58.992 | 50.000 | 0.00 | 0.00 | 0.00 | 4.30 |
5203 | 8616 | 2.290705 | ACACTTATTTTGGGACGGAGGG | 60.291 | 50.000 | 0.00 | 0.00 | 0.00 | 4.30 |
5204 | 8617 | 2.026636 | CACTTATTTTGGGACGGAGGGA | 60.027 | 50.000 | 0.00 | 0.00 | 0.00 | 4.20 |
5205 | 8618 | 2.238898 | ACTTATTTTGGGACGGAGGGAG | 59.761 | 50.000 | 0.00 | 0.00 | 0.00 | 4.30 |
5206 | 8619 | 1.961133 | TATTTTGGGACGGAGGGAGT | 58.039 | 50.000 | 0.00 | 0.00 | 0.00 | 3.85 |
5207 | 8620 | 1.961133 | ATTTTGGGACGGAGGGAGTA | 58.039 | 50.000 | 0.00 | 0.00 | 0.00 | 2.59 |
5208 | 8621 | 0.978907 | TTTTGGGACGGAGGGAGTAC | 59.021 | 55.000 | 0.00 | 0.00 | 0.00 | 2.73 |
5210 | 8623 | 0.115745 | TTGGGACGGAGGGAGTACTT | 59.884 | 55.000 | 0.00 | 0.00 | 0.00 | 2.24 |
5214 | 8627 | 3.036819 | GGGACGGAGGGAGTACTTTTAT | 58.963 | 50.000 | 0.00 | 0.00 | 0.00 | 1.40 |
5217 | 8630 | 4.439968 | GACGGAGGGAGTACTTTTATTGG | 58.560 | 47.826 | 0.00 | 0.00 | 0.00 | 3.16 |
5218 | 8631 | 3.842436 | ACGGAGGGAGTACTTTTATTGGT | 59.158 | 43.478 | 0.00 | 0.00 | 0.00 | 3.67 |
5221 | 8634 | 6.013466 | ACGGAGGGAGTACTTTTATTGGTTAA | 60.013 | 38.462 | 0.00 | 0.00 | 0.00 | 2.01 |
5223 | 8636 | 6.314648 | GGAGGGAGTACTTTTATTGGTTAACG | 59.685 | 42.308 | 0.00 | 0.00 | 0.00 | 3.18 |
5224 | 8637 | 7.008021 | AGGGAGTACTTTTATTGGTTAACGA | 57.992 | 36.000 | 0.00 | 0.00 | 0.00 | 3.85 |
5230 | 8643 | 8.316214 | AGTACTTTTATTGGTTAACGAGATCCA | 58.684 | 33.333 | 0.00 | 0.00 | 0.00 | 3.41 |
5238 | 8651 | 5.556915 | TGGTTAACGAGATCCACAAAGAAT | 58.443 | 37.500 | 0.00 | 0.00 | 0.00 | 2.40 |
5243 | 8656 | 9.704098 | GTTAACGAGATCCACAAAGAATAAATC | 57.296 | 33.333 | 0.00 | 0.00 | 0.00 | 2.17 |
5246 | 8659 | 8.511604 | ACGAGATCCACAAAGAATAAATCAAT | 57.488 | 30.769 | 0.00 | 0.00 | 0.00 | 2.57 |
5247 | 8660 | 8.616076 | ACGAGATCCACAAAGAATAAATCAATC | 58.384 | 33.333 | 0.00 | 0.00 | 0.00 | 2.67 |
5248 | 8661 | 8.834465 | CGAGATCCACAAAGAATAAATCAATCT | 58.166 | 33.333 | 0.00 | 0.00 | 0.00 | 2.40 |
5249 | 8662 | 9.947669 | GAGATCCACAAAGAATAAATCAATCTG | 57.052 | 33.333 | 0.00 | 0.00 | 0.00 | 2.90 |
5250 | 8663 | 8.910944 | AGATCCACAAAGAATAAATCAATCTGG | 58.089 | 33.333 | 0.00 | 0.00 | 0.00 | 3.86 |
5251 | 8664 | 8.827832 | ATCCACAAAGAATAAATCAATCTGGA | 57.172 | 30.769 | 0.00 | 0.00 | 0.00 | 3.86 |
5253 | 8666 | 9.919416 | TCCACAAAGAATAAATCAATCTGGATA | 57.081 | 29.630 | 0.00 | 0.00 | 0.00 | 2.59 |
5255 | 8668 | 9.674824 | CACAAAGAATAAATCAATCTGGATAGC | 57.325 | 33.333 | 0.00 | 0.00 | 0.00 | 2.97 |
5256 | 8669 | 8.562892 | ACAAAGAATAAATCAATCTGGATAGCG | 58.437 | 33.333 | 0.00 | 0.00 | 0.00 | 4.26 |
5257 | 8670 | 8.562892 | CAAAGAATAAATCAATCTGGATAGCGT | 58.437 | 33.333 | 0.00 | 0.00 | 0.00 | 5.07 |
5285 | 8702 | 4.053295 | TGTCACTTCTGCCGTTTAGTAAC | 58.947 | 43.478 | 0.00 | 0.00 | 0.00 | 2.50 |
5294 | 8711 | 2.616001 | GCCGTTTAGTAACCCACCATGA | 60.616 | 50.000 | 0.00 | 0.00 | 0.00 | 3.07 |
5301 | 8718 | 7.312899 | GTTTAGTAACCCACCATGATTTCTTG | 58.687 | 38.462 | 0.00 | 0.00 | 0.00 | 3.02 |
5309 | 8726 | 4.095483 | CCACCATGATTTCTTGTGCTAGAC | 59.905 | 45.833 | 0.00 | 0.00 | 0.00 | 2.59 |
5311 | 8728 | 5.181811 | CACCATGATTTCTTGTGCTAGACAA | 59.818 | 40.000 | 0.00 | 0.76 | 42.55 | 3.18 |
5383 | 8801 | 8.065007 | TGCTAATATTATCCTTTTTGGTTCCCT | 58.935 | 33.333 | 0.00 | 0.00 | 37.07 | 4.20 |
5389 | 8807 | 4.750833 | TCCTTTTTGGTTCCCTGGAATA | 57.249 | 40.909 | 1.26 | 0.00 | 36.45 | 1.75 |
5396 | 8815 | 6.603940 | TTTGGTTCCCTGGAATATTTCTTG | 57.396 | 37.500 | 1.26 | 0.00 | 36.45 | 3.02 |
5397 | 8816 | 4.023291 | TGGTTCCCTGGAATATTTCTTGC | 58.977 | 43.478 | 1.26 | 0.00 | 36.45 | 4.01 |
5399 | 8818 | 4.711846 | GGTTCCCTGGAATATTTCTTGCTT | 59.288 | 41.667 | 1.26 | 0.00 | 36.45 | 3.91 |
5400 | 8819 | 5.187772 | GGTTCCCTGGAATATTTCTTGCTTT | 59.812 | 40.000 | 1.26 | 0.00 | 36.45 | 3.51 |
5404 | 8823 | 6.496565 | TCCCTGGAATATTTCTTGCTTTTCAA | 59.503 | 34.615 | 0.00 | 0.00 | 0.00 | 2.69 |
5405 | 8824 | 7.180766 | TCCCTGGAATATTTCTTGCTTTTCAAT | 59.819 | 33.333 | 0.00 | 0.00 | 33.57 | 2.57 |
5406 | 8825 | 7.279313 | CCCTGGAATATTTCTTGCTTTTCAATG | 59.721 | 37.037 | 0.00 | 0.00 | 33.57 | 2.82 |
5408 | 8827 | 7.388437 | TGGAATATTTCTTGCTTTTCAATGCT | 58.612 | 30.769 | 0.00 | 0.00 | 33.57 | 3.79 |
5409 | 8828 | 8.530311 | TGGAATATTTCTTGCTTTTCAATGCTA | 58.470 | 29.630 | 0.00 | 0.00 | 33.57 | 3.49 |
5410 | 8829 | 9.369904 | GGAATATTTCTTGCTTTTCAATGCTAA | 57.630 | 29.630 | 0.00 | 0.00 | 33.57 | 3.09 |
5414 | 8833 | 7.878477 | TTTCTTGCTTTTCAATGCTAATCTG | 57.122 | 32.000 | 0.00 | 0.00 | 33.57 | 2.90 |
5415 | 8834 | 6.579666 | TCTTGCTTTTCAATGCTAATCTGT | 57.420 | 33.333 | 0.00 | 0.00 | 33.57 | 3.41 |
5416 | 8835 | 7.686438 | TCTTGCTTTTCAATGCTAATCTGTA | 57.314 | 32.000 | 0.00 | 0.00 | 33.57 | 2.74 |
5417 | 8836 | 8.284945 | TCTTGCTTTTCAATGCTAATCTGTAT | 57.715 | 30.769 | 0.00 | 0.00 | 33.57 | 2.29 |
5418 | 8837 | 8.400947 | TCTTGCTTTTCAATGCTAATCTGTATC | 58.599 | 33.333 | 0.00 | 0.00 | 33.57 | 2.24 |
5419 | 8838 | 7.628769 | TGCTTTTCAATGCTAATCTGTATCA | 57.371 | 32.000 | 0.00 | 0.00 | 0.00 | 2.15 |
5420 | 8839 | 7.700505 | TGCTTTTCAATGCTAATCTGTATCAG | 58.299 | 34.615 | 0.00 | 0.00 | 0.00 | 2.90 |
5421 | 8840 | 7.337689 | TGCTTTTCAATGCTAATCTGTATCAGT | 59.662 | 33.333 | 0.00 | 0.00 | 32.61 | 3.41 |
5422 | 8841 | 7.642978 | GCTTTTCAATGCTAATCTGTATCAGTG | 59.357 | 37.037 | 0.00 | 0.00 | 32.61 | 3.66 |
5426 | 8845 | 4.327982 | TGCTAATCTGTATCAGTGCTCC | 57.672 | 45.455 | 0.00 | 0.00 | 32.61 | 4.70 |
5437 | 8856 | 1.753649 | TCAGTGCTCCTACTCTGCATC | 59.246 | 52.381 | 0.00 | 0.00 | 39.00 | 3.91 |
5442 | 8861 | 1.950909 | GCTCCTACTCTGCATCGTACT | 59.049 | 52.381 | 0.00 | 0.00 | 0.00 | 2.73 |
5458 | 8877 | 4.892655 | TCGTACTTATTGCTTGAATTGCG | 58.107 | 39.130 | 0.00 | 0.00 | 0.00 | 4.85 |
5465 | 8884 | 3.383620 | TTGCTTGAATTGCGGACAAAT | 57.616 | 38.095 | 0.00 | 0.00 | 39.77 | 2.32 |
5466 | 8885 | 2.674954 | TGCTTGAATTGCGGACAAATG | 58.325 | 42.857 | 0.00 | 0.00 | 39.77 | 2.32 |
5467 | 8886 | 2.035704 | TGCTTGAATTGCGGACAAATGT | 59.964 | 40.909 | 0.00 | 0.00 | 39.77 | 2.71 |
5468 | 8887 | 2.663119 | GCTTGAATTGCGGACAAATGTC | 59.337 | 45.455 | 4.96 | 4.96 | 44.04 | 3.06 |
5469 | 8888 | 3.856638 | GCTTGAATTGCGGACAAATGTCA | 60.857 | 43.478 | 14.93 | 0.00 | 46.47 | 3.58 |
5470 | 8889 | 4.487948 | CTTGAATTGCGGACAAATGTCAT | 58.512 | 39.130 | 14.93 | 0.00 | 46.47 | 3.06 |
5471 | 8890 | 3.835779 | TGAATTGCGGACAAATGTCATG | 58.164 | 40.909 | 14.93 | 8.01 | 46.47 | 3.07 |
5491 | 8911 | 5.250313 | TCATGGTTTTAAATGGCAGGGATTT | 59.750 | 36.000 | 0.00 | 0.00 | 0.00 | 2.17 |
5607 | 9027 | 3.631145 | TGCTGTTGCAGAATCAAGTTC | 57.369 | 42.857 | 0.00 | 0.00 | 45.31 | 3.01 |
5608 | 9028 | 2.950975 | TGCTGTTGCAGAATCAAGTTCA | 59.049 | 40.909 | 0.00 | 0.00 | 45.31 | 3.18 |
5612 | 9032 | 5.106396 | GCTGTTGCAGAATCAAGTTCATAGT | 60.106 | 40.000 | 0.00 | 0.00 | 39.39 | 2.12 |
5627 | 9047 | 3.239449 | TCATAGTTGACACACCTCCAGT | 58.761 | 45.455 | 0.00 | 0.00 | 0.00 | 4.00 |
5681 | 9101 | 8.006298 | TGTTCTAATTGGAGAAACATGTTTGT | 57.994 | 30.769 | 27.85 | 23.83 | 37.20 | 2.83 |
5682 | 9102 | 8.134895 | TGTTCTAATTGGAGAAACATGTTTGTC | 58.865 | 33.333 | 30.59 | 30.59 | 40.74 | 3.18 |
5686 | 9106 | 9.533253 | CTAATTGGAGAAACATGTTTGTCTTTT | 57.467 | 29.630 | 34.18 | 27.31 | 41.10 | 2.27 |
5704 | 9124 | 9.796120 | TTGTCTTTTTACATCTTGGTAAAACTG | 57.204 | 29.630 | 9.91 | 7.27 | 46.90 | 3.16 |
5705 | 9125 | 9.179909 | TGTCTTTTTACATCTTGGTAAAACTGA | 57.820 | 29.630 | 9.91 | 8.94 | 46.90 | 3.41 |
5736 | 9156 | 9.351570 | CTTTTTGAGAGAATAAATTCTTCTGCC | 57.648 | 33.333 | 6.66 | 0.00 | 46.47 | 4.85 |
5737 | 9157 | 8.641498 | TTTTGAGAGAATAAATTCTTCTGCCT | 57.359 | 30.769 | 6.66 | 0.00 | 46.47 | 4.75 |
5739 | 9159 | 7.192852 | TGAGAGAATAAATTCTTCTGCCTCT | 57.807 | 36.000 | 6.66 | 0.00 | 46.47 | 3.69 |
5740 | 9160 | 7.628234 | TGAGAGAATAAATTCTTCTGCCTCTT | 58.372 | 34.615 | 6.66 | 0.00 | 46.47 | 2.85 |
5741 | 9161 | 7.768120 | TGAGAGAATAAATTCTTCTGCCTCTTC | 59.232 | 37.037 | 6.66 | 0.00 | 46.47 | 2.87 |
5742 | 9162 | 7.628234 | AGAGAATAAATTCTTCTGCCTCTTCA | 58.372 | 34.615 | 6.66 | 0.00 | 46.47 | 3.02 |
5746 | 9166 | 5.956068 | AAATTCTTCTGCCTCTTCACTTC | 57.044 | 39.130 | 0.00 | 0.00 | 0.00 | 3.01 |
5747 | 9167 | 4.630644 | ATTCTTCTGCCTCTTCACTTCA | 57.369 | 40.909 | 0.00 | 0.00 | 0.00 | 3.02 |
5748 | 9168 | 4.422073 | TTCTTCTGCCTCTTCACTTCAA | 57.578 | 40.909 | 0.00 | 0.00 | 0.00 | 2.69 |
5749 | 9169 | 4.422073 | TCTTCTGCCTCTTCACTTCAAA | 57.578 | 40.909 | 0.00 | 0.00 | 0.00 | 2.69 |
5750 | 9170 | 4.780815 | TCTTCTGCCTCTTCACTTCAAAA | 58.219 | 39.130 | 0.00 | 0.00 | 0.00 | 2.44 |
5751 | 9171 | 5.192927 | TCTTCTGCCTCTTCACTTCAAAAA | 58.807 | 37.500 | 0.00 | 0.00 | 0.00 | 1.94 |
5790 | 9220 | 8.282982 | TCTTCATACTATCTCCTCCTTTGTACT | 58.717 | 37.037 | 0.00 | 0.00 | 0.00 | 2.73 |
5791 | 9221 | 9.575868 | CTTCATACTATCTCCTCCTTTGTACTA | 57.424 | 37.037 | 0.00 | 0.00 | 0.00 | 1.82 |
5792 | 9222 | 8.921353 | TCATACTATCTCCTCCTTTGTACTAC | 57.079 | 38.462 | 0.00 | 0.00 | 0.00 | 2.73 |
5793 | 9223 | 8.725256 | TCATACTATCTCCTCCTTTGTACTACT | 58.275 | 37.037 | 0.00 | 0.00 | 0.00 | 2.57 |
5798 | 9228 | 7.982761 | ATCTCCTCCTTTGTACTACTATACG | 57.017 | 40.000 | 0.00 | 0.00 | 0.00 | 3.06 |
5799 | 9229 | 6.893583 | TCTCCTCCTTTGTACTACTATACGT | 58.106 | 40.000 | 0.00 | 0.00 | 0.00 | 3.57 |
5800 | 9230 | 6.765036 | TCTCCTCCTTTGTACTACTATACGTG | 59.235 | 42.308 | 0.00 | 0.00 | 0.00 | 4.49 |
5801 | 9231 | 5.824624 | TCCTCCTTTGTACTACTATACGTGG | 59.175 | 44.000 | 0.00 | 0.00 | 0.00 | 4.94 |
5802 | 9232 | 5.505173 | TCCTTTGTACTACTATACGTGGC | 57.495 | 43.478 | 0.00 | 0.00 | 0.00 | 5.01 |
5805 | 9235 | 7.000472 | TCCTTTGTACTACTATACGTGGCTAT | 59.000 | 38.462 | 0.00 | 0.00 | 0.00 | 2.97 |
5821 | 9251 | 6.650807 | ACGTGGCTATAATCATCCATTGTAAG | 59.349 | 38.462 | 0.00 | 0.00 | 0.00 | 2.34 |
5822 | 9252 | 6.650807 | CGTGGCTATAATCATCCATTGTAAGT | 59.349 | 38.462 | 0.00 | 0.00 | 0.00 | 2.24 |
5823 | 9253 | 7.173218 | CGTGGCTATAATCATCCATTGTAAGTT | 59.827 | 37.037 | 0.00 | 0.00 | 0.00 | 2.66 |
5824 | 9254 | 8.292448 | GTGGCTATAATCATCCATTGTAAGTTG | 58.708 | 37.037 | 0.00 | 0.00 | 0.00 | 3.16 |
5825 | 9255 | 7.998383 | TGGCTATAATCATCCATTGTAAGTTGT | 59.002 | 33.333 | 0.00 | 0.00 | 0.00 | 3.32 |
5826 | 9256 | 9.502091 | GGCTATAATCATCCATTGTAAGTTGTA | 57.498 | 33.333 | 0.00 | 0.00 | 0.00 | 2.41 |
5831 | 9261 | 8.635765 | AATCATCCATTGTAAGTTGTAACAGT | 57.364 | 30.769 | 0.00 | 0.00 | 0.00 | 3.55 |
5832 | 9262 | 9.733556 | AATCATCCATTGTAAGTTGTAACAGTA | 57.266 | 29.630 | 0.00 | 0.00 | 0.00 | 2.74 |
5833 | 9263 | 8.771920 | TCATCCATTGTAAGTTGTAACAGTAG | 57.228 | 34.615 | 0.00 | 0.00 | 0.00 | 2.57 |
5834 | 9264 | 7.333423 | TCATCCATTGTAAGTTGTAACAGTAGC | 59.667 | 37.037 | 0.00 | 0.00 | 0.00 | 3.58 |
5859 | 9289 | 3.005578 | GGATAGAGTCCGTCAATGTACCC | 59.994 | 52.174 | 0.00 | 0.00 | 37.23 | 3.69 |
5860 | 9290 | 1.192428 | AGAGTCCGTCAATGTACCCC | 58.808 | 55.000 | 0.00 | 0.00 | 0.00 | 4.95 |
5865 | 9295 | 1.592743 | CGTCAATGTACCCCACCGA | 59.407 | 57.895 | 0.00 | 0.00 | 0.00 | 4.69 |
5942 | 9372 | 2.206576 | AGATTGGCTGTGGACTTTCC | 57.793 | 50.000 | 0.00 | 0.00 | 36.96 | 3.13 |
6032 | 9462 | 3.120041 | GGATCGCTAAAGCACTCTTCTC | 58.880 | 50.000 | 2.44 | 0.00 | 42.21 | 2.87 |
6133 | 9565 | 2.156310 | GTGTAAAGAACGCCACTAACGG | 59.844 | 50.000 | 0.00 | 0.00 | 32.10 | 4.44 |
6338 | 10718 | 1.340017 | TGATTCGCAAGCTTAAGGGCT | 60.340 | 47.619 | 0.00 | 0.00 | 45.30 | 5.19 |
6377 | 10757 | 6.500684 | TTGCAGGACTAAAAGATCATGAAC | 57.499 | 37.500 | 0.00 | 0.00 | 0.00 | 3.18 |
6378 | 10758 | 4.631377 | TGCAGGACTAAAAGATCATGAACG | 59.369 | 41.667 | 0.00 | 0.00 | 0.00 | 3.95 |
6429 | 12250 | 5.278660 | GCATTTGCATCCCTCCTAACTATTG | 60.279 | 44.000 | 0.00 | 0.00 | 41.59 | 1.90 |
6436 | 12257 | 2.102588 | CCCTCCTAACTATTGGACCACG | 59.897 | 54.545 | 0.00 | 0.00 | 0.00 | 4.94 |
6493 | 12317 | 3.628646 | AAGGCTCAGGGCGCGATTT | 62.629 | 57.895 | 12.10 | 0.00 | 42.94 | 2.17 |
6496 | 12320 | 2.182842 | GCTCAGGGCGCGATTTGAT | 61.183 | 57.895 | 12.10 | 0.00 | 0.00 | 2.57 |
6497 | 12321 | 1.937391 | CTCAGGGCGCGATTTGATC | 59.063 | 57.895 | 12.10 | 0.00 | 0.00 | 2.92 |
6512 | 12336 | 3.804518 | TTGATCGTTGTTTCATGGACG | 57.195 | 42.857 | 0.00 | 0.00 | 36.89 | 4.79 |
6513 | 12337 | 3.033368 | TGATCGTTGTTTCATGGACGA | 57.967 | 42.857 | 10.03 | 10.03 | 46.77 | 4.20 |
6517 | 12341 | 4.914312 | TCGTTGTTTCATGGACGATTAC | 57.086 | 40.909 | 0.00 | 0.00 | 39.33 | 1.89 |
6518 | 12342 | 4.308265 | TCGTTGTTTCATGGACGATTACA | 58.692 | 39.130 | 0.00 | 0.00 | 39.33 | 2.41 |
6519 | 12343 | 4.387559 | TCGTTGTTTCATGGACGATTACAG | 59.612 | 41.667 | 0.00 | 0.00 | 39.33 | 2.74 |
6520 | 12344 | 4.435518 | CGTTGTTTCATGGACGATTACAGG | 60.436 | 45.833 | 0.00 | 0.00 | 37.69 | 4.00 |
6521 | 12345 | 3.006940 | TGTTTCATGGACGATTACAGGC | 58.993 | 45.455 | 0.00 | 0.00 | 0.00 | 4.85 |
6522 | 12346 | 1.934589 | TTCATGGACGATTACAGGCG | 58.065 | 50.000 | 0.00 | 0.00 | 0.00 | 5.52 |
6523 | 12347 | 0.104120 | TCATGGACGATTACAGGCGG | 59.896 | 55.000 | 0.00 | 0.00 | 0.00 | 6.13 |
6524 | 12348 | 0.179084 | CATGGACGATTACAGGCGGT | 60.179 | 55.000 | 0.00 | 0.00 | 0.00 | 5.68 |
6525 | 12349 | 0.539986 | ATGGACGATTACAGGCGGTT | 59.460 | 50.000 | 0.00 | 0.00 | 0.00 | 4.44 |
6526 | 12350 | 0.322322 | TGGACGATTACAGGCGGTTT | 59.678 | 50.000 | 0.00 | 0.00 | 0.00 | 3.27 |
6527 | 12351 | 1.270947 | TGGACGATTACAGGCGGTTTT | 60.271 | 47.619 | 0.00 | 0.00 | 0.00 | 2.43 |
6528 | 12352 | 1.395954 | GGACGATTACAGGCGGTTTTC | 59.604 | 52.381 | 0.00 | 0.00 | 0.00 | 2.29 |
6529 | 12353 | 2.070783 | GACGATTACAGGCGGTTTTCA | 58.929 | 47.619 | 0.00 | 0.00 | 0.00 | 2.69 |
6530 | 12354 | 2.676342 | GACGATTACAGGCGGTTTTCAT | 59.324 | 45.455 | 0.00 | 0.00 | 0.00 | 2.57 |
6531 | 12355 | 2.676342 | ACGATTACAGGCGGTTTTCATC | 59.324 | 45.455 | 0.00 | 0.00 | 0.00 | 2.92 |
6532 | 12356 | 2.031683 | CGATTACAGGCGGTTTTCATCC | 59.968 | 50.000 | 0.00 | 0.00 | 0.00 | 3.51 |
6533 | 12357 | 2.570415 | TTACAGGCGGTTTTCATCCA | 57.430 | 45.000 | 0.00 | 0.00 | 0.00 | 3.41 |
6534 | 12358 | 2.107950 | TACAGGCGGTTTTCATCCAG | 57.892 | 50.000 | 0.00 | 0.00 | 0.00 | 3.86 |
6535 | 12359 | 0.609131 | ACAGGCGGTTTTCATCCAGG | 60.609 | 55.000 | 0.00 | 0.00 | 0.00 | 4.45 |
6536 | 12360 | 0.609131 | CAGGCGGTTTTCATCCAGGT | 60.609 | 55.000 | 0.00 | 0.00 | 0.00 | 4.00 |
6537 | 12361 | 0.609131 | AGGCGGTTTTCATCCAGGTG | 60.609 | 55.000 | 0.00 | 0.00 | 0.00 | 4.00 |
6538 | 12362 | 1.595093 | GGCGGTTTTCATCCAGGTGG | 61.595 | 60.000 | 0.00 | 0.00 | 0.00 | 4.61 |
6539 | 12363 | 0.893727 | GCGGTTTTCATCCAGGTGGT | 60.894 | 55.000 | 0.00 | 0.00 | 36.34 | 4.16 |
6540 | 12364 | 1.616159 | CGGTTTTCATCCAGGTGGTT | 58.384 | 50.000 | 0.00 | 0.00 | 36.34 | 3.67 |
6541 | 12365 | 1.960689 | CGGTTTTCATCCAGGTGGTTT | 59.039 | 47.619 | 0.00 | 0.00 | 36.34 | 3.27 |
6542 | 12366 | 2.364002 | CGGTTTTCATCCAGGTGGTTTT | 59.636 | 45.455 | 0.00 | 0.00 | 36.34 | 2.43 |
6543 | 12367 | 3.181470 | CGGTTTTCATCCAGGTGGTTTTT | 60.181 | 43.478 | 0.00 | 0.00 | 36.34 | 1.94 |
6544 | 12368 | 4.377021 | GGTTTTCATCCAGGTGGTTTTTC | 58.623 | 43.478 | 0.00 | 0.00 | 36.34 | 2.29 |
6545 | 12369 | 4.100963 | GGTTTTCATCCAGGTGGTTTTTCT | 59.899 | 41.667 | 0.00 | 0.00 | 36.34 | 2.52 |
6546 | 12370 | 5.396324 | GGTTTTCATCCAGGTGGTTTTTCTT | 60.396 | 40.000 | 0.00 | 0.00 | 36.34 | 2.52 |
6547 | 12371 | 5.529581 | TTTCATCCAGGTGGTTTTTCTTC | 57.470 | 39.130 | 0.00 | 0.00 | 36.34 | 2.87 |
6548 | 12372 | 3.146066 | TCATCCAGGTGGTTTTTCTTCG | 58.854 | 45.455 | 0.00 | 0.00 | 36.34 | 3.79 |
6549 | 12373 | 3.146066 | CATCCAGGTGGTTTTTCTTCGA | 58.854 | 45.455 | 0.00 | 0.00 | 36.34 | 3.71 |
6550 | 12374 | 2.846193 | TCCAGGTGGTTTTTCTTCGAG | 58.154 | 47.619 | 0.00 | 0.00 | 36.34 | 4.04 |
6551 | 12375 | 1.880027 | CCAGGTGGTTTTTCTTCGAGG | 59.120 | 52.381 | 0.00 | 0.00 | 0.00 | 4.63 |
6552 | 12376 | 2.486548 | CCAGGTGGTTTTTCTTCGAGGA | 60.487 | 50.000 | 0.00 | 0.00 | 0.00 | 3.71 |
6553 | 12377 | 3.412386 | CAGGTGGTTTTTCTTCGAGGAT | 58.588 | 45.455 | 0.00 | 0.00 | 0.00 | 3.24 |
6554 | 12378 | 4.564821 | CCAGGTGGTTTTTCTTCGAGGATA | 60.565 | 45.833 | 0.00 | 0.00 | 0.00 | 2.59 |
6555 | 12379 | 5.001232 | CAGGTGGTTTTTCTTCGAGGATAA | 58.999 | 41.667 | 0.00 | 0.00 | 0.00 | 1.75 |
6556 | 12380 | 5.472137 | CAGGTGGTTTTTCTTCGAGGATAAA | 59.528 | 40.000 | 8.68 | 8.68 | 0.00 | 1.40 |
6557 | 12381 | 6.151144 | CAGGTGGTTTTTCTTCGAGGATAAAT | 59.849 | 38.462 | 14.36 | 0.00 | 0.00 | 1.40 |
6558 | 12382 | 6.374613 | AGGTGGTTTTTCTTCGAGGATAAATC | 59.625 | 38.462 | 14.36 | 14.25 | 0.00 | 2.17 |
6578 | 12402 | 4.886247 | TCCAGGCGGAAAATTTATTACG | 57.114 | 40.909 | 0.00 | 0.00 | 38.83 | 3.18 |
6579 | 12403 | 3.628487 | TCCAGGCGGAAAATTTATTACGG | 59.372 | 43.478 | 0.00 | 0.00 | 38.83 | 4.02 |
6580 | 12404 | 3.243267 | CCAGGCGGAAAATTTATTACGGG | 60.243 | 47.826 | 0.00 | 0.00 | 0.00 | 5.28 |
6581 | 12405 | 2.359848 | AGGCGGAAAATTTATTACGGGC | 59.640 | 45.455 | 0.00 | 1.63 | 0.00 | 6.13 |
6582 | 12406 | 2.377880 | GCGGAAAATTTATTACGGGCG | 58.622 | 47.619 | 0.00 | 0.00 | 0.00 | 6.13 |
6583 | 12407 | 2.223317 | GCGGAAAATTTATTACGGGCGT | 60.223 | 45.455 | 0.00 | 0.00 | 0.00 | 5.68 |
6584 | 12408 | 3.002144 | GCGGAAAATTTATTACGGGCGTA | 59.998 | 43.478 | 0.00 | 0.00 | 0.00 | 4.42 |
6585 | 12409 | 4.319694 | GCGGAAAATTTATTACGGGCGTAT | 60.320 | 41.667 | 0.00 | 0.00 | 0.00 | 3.06 |
6586 | 12410 | 5.750650 | CGGAAAATTTATTACGGGCGTATT | 58.249 | 37.500 | 0.00 | 0.00 | 0.00 | 1.89 |
6587 | 12411 | 6.200808 | CGGAAAATTTATTACGGGCGTATTT | 58.799 | 36.000 | 0.00 | 0.00 | 0.00 | 1.40 |
6588 | 12412 | 6.357766 | CGGAAAATTTATTACGGGCGTATTTC | 59.642 | 38.462 | 0.00 | 0.00 | 0.00 | 2.17 |
6589 | 12413 | 6.357766 | GGAAAATTTATTACGGGCGTATTTCG | 59.642 | 38.462 | 0.00 | 0.00 | 43.12 | 3.46 |
6590 | 12414 | 5.989551 | AATTTATTACGGGCGTATTTCGT | 57.010 | 34.783 | 0.00 | 0.00 | 42.13 | 3.85 |
6591 | 12415 | 5.989551 | ATTTATTACGGGCGTATTTCGTT | 57.010 | 34.783 | 0.00 | 0.00 | 42.13 | 3.85 |
6592 | 12416 | 4.775440 | TTATTACGGGCGTATTTCGTTG | 57.225 | 40.909 | 0.00 | 0.00 | 42.13 | 4.10 |
6593 | 12417 | 2.077413 | TTACGGGCGTATTTCGTTGT | 57.923 | 45.000 | 0.00 | 0.00 | 42.13 | 3.32 |
6594 | 12418 | 2.929531 | TACGGGCGTATTTCGTTGTA | 57.070 | 45.000 | 0.00 | 0.00 | 42.13 | 2.41 |
6595 | 12419 | 1.632422 | ACGGGCGTATTTCGTTGTAG | 58.368 | 50.000 | 0.00 | 0.00 | 42.13 | 2.74 |
6596 | 12420 | 1.067635 | ACGGGCGTATTTCGTTGTAGT | 60.068 | 47.619 | 0.00 | 0.00 | 42.13 | 2.73 |
6597 | 12421 | 2.163412 | ACGGGCGTATTTCGTTGTAGTA | 59.837 | 45.455 | 0.00 | 0.00 | 42.13 | 1.82 |
6598 | 12422 | 2.785477 | CGGGCGTATTTCGTTGTAGTAG | 59.215 | 50.000 | 0.00 | 0.00 | 42.13 | 2.57 |
6599 | 12423 | 3.731867 | CGGGCGTATTTCGTTGTAGTAGT | 60.732 | 47.826 | 0.00 | 0.00 | 42.13 | 2.73 |
6600 | 12424 | 3.549070 | GGGCGTATTTCGTTGTAGTAGTG | 59.451 | 47.826 | 0.00 | 0.00 | 42.13 | 2.74 |
6601 | 12425 | 4.414852 | GGCGTATTTCGTTGTAGTAGTGA | 58.585 | 43.478 | 0.00 | 0.00 | 42.13 | 3.41 |
6602 | 12426 | 4.858692 | GGCGTATTTCGTTGTAGTAGTGAA | 59.141 | 41.667 | 0.00 | 0.00 | 42.13 | 3.18 |
6603 | 12427 | 5.220098 | GGCGTATTTCGTTGTAGTAGTGAAC | 60.220 | 44.000 | 0.00 | 0.00 | 42.13 | 3.18 |
6604 | 12428 | 5.343058 | GCGTATTTCGTTGTAGTAGTGAACA | 59.657 | 40.000 | 0.00 | 0.00 | 42.13 | 3.18 |
6605 | 12429 | 6.452090 | GCGTATTTCGTTGTAGTAGTGAACAG | 60.452 | 42.308 | 0.00 | 0.00 | 42.13 | 3.16 |
6606 | 12430 | 6.580041 | CGTATTTCGTTGTAGTAGTGAACAGT | 59.420 | 38.462 | 0.00 | 0.00 | 34.52 | 3.55 |
6607 | 12431 | 7.746034 | CGTATTTCGTTGTAGTAGTGAACAGTA | 59.254 | 37.037 | 0.00 | 0.00 | 34.52 | 2.74 |
6608 | 12432 | 9.398170 | GTATTTCGTTGTAGTAGTGAACAGTAA | 57.602 | 33.333 | 0.00 | 0.00 | 0.00 | 2.24 |
6609 | 12433 | 7.684062 | TTTCGTTGTAGTAGTGAACAGTAAC | 57.316 | 36.000 | 0.00 | 0.00 | 0.00 | 2.50 |
6610 | 12434 | 6.624352 | TCGTTGTAGTAGTGAACAGTAACT | 57.376 | 37.500 | 0.00 | 0.00 | 0.00 | 2.24 |
6611 | 12435 | 6.432936 | TCGTTGTAGTAGTGAACAGTAACTG | 58.567 | 40.000 | 0.00 | 0.00 | 37.52 | 3.16 |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
52 | 53 | 5.050567 | GCACCCATTAAGCGTGTACTAATAC | 60.051 | 44.000 | 0.00 | 0.00 | 0.00 | 1.89 |
63 | 64 | 2.356135 | ACAGTAAGCACCCATTAAGCG | 58.644 | 47.619 | 0.00 | 0.00 | 0.00 | 4.68 |
113 | 114 | 1.747355 | GGACTTCATGTGGCCATTCAG | 59.253 | 52.381 | 9.72 | 3.63 | 0.00 | 3.02 |
139 | 149 | 9.161629 | CACATAACTACACATCACAGGAATTTA | 57.838 | 33.333 | 0.00 | 0.00 | 0.00 | 1.40 |
174 | 184 | 8.832521 | TCTTTAGTACACACCACTTGTTTATTG | 58.167 | 33.333 | 0.00 | 0.00 | 35.67 | 1.90 |
203 | 213 | 4.142038 | ACTTTCTCCTTTGCGGTAACAAT | 58.858 | 39.130 | 0.00 | 0.00 | 0.00 | 2.71 |
212 | 222 | 3.823304 | AGGTGATCAACTTTCTCCTTTGC | 59.177 | 43.478 | 7.68 | 0.00 | 34.28 | 3.68 |
214 | 224 | 5.574970 | AGAGGTGATCAACTTTCTCCTTT | 57.425 | 39.130 | 15.99 | 0.00 | 37.25 | 3.11 |
255 | 265 | 9.617975 | CAACCAAACACAAAACAAACAAATATT | 57.382 | 25.926 | 0.00 | 0.00 | 0.00 | 1.28 |
256 | 266 | 8.787852 | ACAACCAAACACAAAACAAACAAATAT | 58.212 | 25.926 | 0.00 | 0.00 | 0.00 | 1.28 |
257 | 267 | 8.154649 | ACAACCAAACACAAAACAAACAAATA | 57.845 | 26.923 | 0.00 | 0.00 | 0.00 | 1.40 |
258 | 268 | 7.032377 | ACAACCAAACACAAAACAAACAAAT | 57.968 | 28.000 | 0.00 | 0.00 | 0.00 | 2.32 |
259 | 269 | 6.436843 | ACAACCAAACACAAAACAAACAAA | 57.563 | 29.167 | 0.00 | 0.00 | 0.00 | 2.83 |
260 | 270 | 7.307989 | CCATACAACCAAACACAAAACAAACAA | 60.308 | 33.333 | 0.00 | 0.00 | 0.00 | 2.83 |
261 | 271 | 6.147821 | CCATACAACCAAACACAAAACAAACA | 59.852 | 34.615 | 0.00 | 0.00 | 0.00 | 2.83 |
262 | 272 | 6.147985 | ACCATACAACCAAACACAAAACAAAC | 59.852 | 34.615 | 0.00 | 0.00 | 0.00 | 2.93 |
263 | 273 | 6.231211 | ACCATACAACCAAACACAAAACAAA | 58.769 | 32.000 | 0.00 | 0.00 | 0.00 | 2.83 |
264 | 274 | 5.794894 | ACCATACAACCAAACACAAAACAA | 58.205 | 33.333 | 0.00 | 0.00 | 0.00 | 2.83 |
265 | 275 | 5.407407 | ACCATACAACCAAACACAAAACA | 57.593 | 34.783 | 0.00 | 0.00 | 0.00 | 2.83 |
266 | 276 | 6.454450 | CGAAACCATACAACCAAACACAAAAC | 60.454 | 38.462 | 0.00 | 0.00 | 0.00 | 2.43 |
267 | 277 | 5.577164 | CGAAACCATACAACCAAACACAAAA | 59.423 | 36.000 | 0.00 | 0.00 | 0.00 | 2.44 |
268 | 278 | 5.103000 | CGAAACCATACAACCAAACACAAA | 58.897 | 37.500 | 0.00 | 0.00 | 0.00 | 2.83 |
269 | 279 | 4.398358 | TCGAAACCATACAACCAAACACAA | 59.602 | 37.500 | 0.00 | 0.00 | 0.00 | 3.33 |
270 | 280 | 3.945921 | TCGAAACCATACAACCAAACACA | 59.054 | 39.130 | 0.00 | 0.00 | 0.00 | 3.72 |
271 | 281 | 4.555348 | TCGAAACCATACAACCAAACAC | 57.445 | 40.909 | 0.00 | 0.00 | 0.00 | 3.32 |
272 | 282 | 6.711194 | TCTTATCGAAACCATACAACCAAACA | 59.289 | 34.615 | 0.00 | 0.00 | 0.00 | 2.83 |
273 | 283 | 7.136289 | TCTTATCGAAACCATACAACCAAAC | 57.864 | 36.000 | 0.00 | 0.00 | 0.00 | 2.93 |
274 | 284 | 7.827236 | AGATCTTATCGAAACCATACAACCAAA | 59.173 | 33.333 | 0.00 | 0.00 | 0.00 | 3.28 |
275 | 285 | 7.335627 | AGATCTTATCGAAACCATACAACCAA | 58.664 | 34.615 | 0.00 | 0.00 | 0.00 | 3.67 |
276 | 286 | 6.884832 | AGATCTTATCGAAACCATACAACCA | 58.115 | 36.000 | 0.00 | 0.00 | 0.00 | 3.67 |
277 | 287 | 7.787725 | AAGATCTTATCGAAACCATACAACC | 57.212 | 36.000 | 6.06 | 0.00 | 0.00 | 3.77 |
278 | 288 | 8.665685 | ACAAAGATCTTATCGAAACCATACAAC | 58.334 | 33.333 | 8.75 | 0.00 | 0.00 | 3.32 |
279 | 289 | 8.786826 | ACAAAGATCTTATCGAAACCATACAA | 57.213 | 30.769 | 8.75 | 0.00 | 0.00 | 2.41 |
280 | 290 | 8.664798 | CAACAAAGATCTTATCGAAACCATACA | 58.335 | 33.333 | 8.75 | 0.00 | 0.00 | 2.29 |
281 | 291 | 8.665685 | ACAACAAAGATCTTATCGAAACCATAC | 58.334 | 33.333 | 8.75 | 0.00 | 0.00 | 2.39 |
282 | 292 | 8.786826 | ACAACAAAGATCTTATCGAAACCATA | 57.213 | 30.769 | 8.75 | 0.00 | 0.00 | 2.74 |
283 | 293 | 7.687941 | ACAACAAAGATCTTATCGAAACCAT | 57.312 | 32.000 | 8.75 | 0.00 | 0.00 | 3.55 |
284 | 294 | 7.359595 | CAACAACAAAGATCTTATCGAAACCA | 58.640 | 34.615 | 8.75 | 0.00 | 0.00 | 3.67 |
285 | 295 | 6.801862 | CCAACAACAAAGATCTTATCGAAACC | 59.198 | 38.462 | 8.75 | 0.00 | 0.00 | 3.27 |
286 | 296 | 7.581476 | TCCAACAACAAAGATCTTATCGAAAC | 58.419 | 34.615 | 8.75 | 0.00 | 0.00 | 2.78 |
287 | 297 | 7.737972 | TCCAACAACAAAGATCTTATCGAAA | 57.262 | 32.000 | 8.75 | 0.00 | 0.00 | 3.46 |
288 | 298 | 7.737972 | TTCCAACAACAAAGATCTTATCGAA | 57.262 | 32.000 | 8.75 | 0.34 | 0.00 | 3.71 |
289 | 299 | 7.659799 | TCTTTCCAACAACAAAGATCTTATCGA | 59.340 | 33.333 | 8.75 | 0.00 | 34.39 | 3.59 |
290 | 300 | 7.806690 | TCTTTCCAACAACAAAGATCTTATCG | 58.193 | 34.615 | 8.75 | 3.22 | 34.39 | 2.92 |
298 | 308 | 7.873719 | TTACTGATCTTTCCAACAACAAAGA | 57.126 | 32.000 | 0.00 | 0.00 | 41.67 | 2.52 |
313 | 323 | 9.825972 | CACGAAACAAACAAATATTACTGATCT | 57.174 | 29.630 | 0.00 | 0.00 | 0.00 | 2.75 |
314 | 324 | 9.607285 | ACACGAAACAAACAAATATTACTGATC | 57.393 | 29.630 | 0.00 | 0.00 | 0.00 | 2.92 |
315 | 325 | 9.959749 | AACACGAAACAAACAAATATTACTGAT | 57.040 | 25.926 | 0.00 | 0.00 | 0.00 | 2.90 |
316 | 326 | 9.790389 | AAACACGAAACAAACAAATATTACTGA | 57.210 | 25.926 | 0.00 | 0.00 | 0.00 | 3.41 |
317 | 327 | 9.828220 | CAAACACGAAACAAACAAATATTACTG | 57.172 | 29.630 | 0.00 | 0.00 | 0.00 | 2.74 |
318 | 328 | 9.026074 | CCAAACACGAAACAAACAAATATTACT | 57.974 | 29.630 | 0.00 | 0.00 | 0.00 | 2.24 |
421 | 438 | 4.998671 | TTCCTTCTCAAAACATGCAACA | 57.001 | 36.364 | 0.00 | 0.00 | 0.00 | 3.33 |
835 | 890 | 4.890158 | TGGAGAACTAGAGCATTGTTGA | 57.110 | 40.909 | 0.00 | 0.00 | 0.00 | 3.18 |
844 | 903 | 6.454795 | GCCTTCTCATAATGGAGAACTAGAG | 58.545 | 44.000 | 0.00 | 0.00 | 46.16 | 2.43 |
885 | 944 | 1.402984 | CGTAGATATCCAGAAGCCGCC | 60.403 | 57.143 | 0.00 | 0.00 | 0.00 | 6.13 |
901 | 960 | 2.095466 | GGAGAGATCCGATGAAGCGTAG | 60.095 | 54.545 | 0.00 | 0.00 | 0.00 | 3.51 |
1434 | 1494 | 3.776969 | ACTGATCTCTTTACCTGCATCCA | 59.223 | 43.478 | 0.00 | 0.00 | 0.00 | 3.41 |
1455 | 1515 | 2.280628 | CAGGCCATAGACGAAAAGGAC | 58.719 | 52.381 | 5.01 | 0.00 | 0.00 | 3.85 |
1608 | 1676 | 5.882553 | TGCTCATACAAAACTATGCACATG | 58.117 | 37.500 | 0.00 | 0.00 | 0.00 | 3.21 |
1610 | 1678 | 5.003160 | ACTGCTCATACAAAACTATGCACA | 58.997 | 37.500 | 0.00 | 0.00 | 0.00 | 4.57 |
1715 | 1783 | 6.260936 | GGATGCTTCTTAAATTACTAGCAGCA | 59.739 | 38.462 | 15.36 | 9.76 | 44.29 | 4.41 |
1800 | 1869 | 5.689819 | CAATTGAACTAACCCGTTTCTGAG | 58.310 | 41.667 | 0.00 | 0.00 | 0.00 | 3.35 |
1886 | 2203 | 2.286772 | ACACGTGAAGTTCGCCATTTTC | 60.287 | 45.455 | 25.01 | 0.00 | 0.00 | 2.29 |
1895 | 2212 | 5.840940 | AGCAAGTATAACACGTGAAGTTC | 57.159 | 39.130 | 25.01 | 9.42 | 38.76 | 3.01 |
1904 | 2221 | 9.211485 | TCTAGTTGGTTAAAGCAAGTATAACAC | 57.789 | 33.333 | 0.00 | 0.00 | 39.75 | 3.32 |
1912 | 2229 | 5.452777 | GCAAGTCTAGTTGGTTAAAGCAAG | 58.547 | 41.667 | 0.00 | 0.00 | 36.14 | 4.01 |
1916 | 2233 | 3.435671 | CGGGCAAGTCTAGTTGGTTAAAG | 59.564 | 47.826 | 0.03 | 0.00 | 0.00 | 1.85 |
1937 | 2254 | 1.001048 | TGGTCTTCGGTTGTGTACTCG | 60.001 | 52.381 | 0.00 | 0.00 | 0.00 | 4.18 |
1944 | 2261 | 1.371558 | GGAGCTGGTCTTCGGTTGT | 59.628 | 57.895 | 6.83 | 0.00 | 0.00 | 3.32 |
1949 | 2266 | 1.464734 | TCTACTGGAGCTGGTCTTCG | 58.535 | 55.000 | 6.83 | 0.00 | 0.00 | 3.79 |
1955 | 2272 | 1.277557 | AGCAACTTCTACTGGAGCTGG | 59.722 | 52.381 | 0.00 | 0.00 | 0.00 | 4.85 |
1959 | 2422 | 7.913674 | AAGAAAATAGCAACTTCTACTGGAG | 57.086 | 36.000 | 0.00 | 0.00 | 0.00 | 3.86 |
1986 | 2449 | 8.599624 | ATCCAAAACCTTCATTTGTCTCATAT | 57.400 | 30.769 | 0.00 | 0.00 | 36.31 | 1.78 |
1987 | 2450 | 8.421249 | AATCCAAAACCTTCATTTGTCTCATA | 57.579 | 30.769 | 0.00 | 0.00 | 36.31 | 2.15 |
2016 | 2479 | 1.263356 | TTGTGGGAAGGACGGACTAG | 58.737 | 55.000 | 0.00 | 0.00 | 0.00 | 2.57 |
2022 | 2485 | 2.643551 | AGCATAATTGTGGGAAGGACG | 58.356 | 47.619 | 4.23 | 0.00 | 0.00 | 4.79 |
2026 | 2489 | 3.194116 | AGTGCAAGCATAATTGTGGGAAG | 59.806 | 43.478 | 4.23 | 0.00 | 32.56 | 3.46 |
2053 | 2516 | 9.577222 | ACTCTAGTAATATCTGTAGAAACTCCC | 57.423 | 37.037 | 0.00 | 0.00 | 0.00 | 4.30 |
2081 | 2544 | 1.596477 | CCTCCTGCTCGCCTATTGC | 60.596 | 63.158 | 0.00 | 0.00 | 0.00 | 3.56 |
2098 | 2561 | 2.031163 | AGAACAGGTCAGCACGCC | 59.969 | 61.111 | 0.00 | 0.00 | 0.00 | 5.68 |
2100 | 2563 | 0.249447 | TGTCAGAACAGGTCAGCACG | 60.249 | 55.000 | 0.00 | 0.00 | 0.00 | 5.34 |
2133 | 2596 | 1.517832 | CTGGCGAGGGGAACTAGTG | 59.482 | 63.158 | 0.00 | 0.00 | 0.00 | 2.74 |
2155 | 2618 | 6.379703 | TCCTTTCTCAACAAATTTCAAGACCA | 59.620 | 34.615 | 0.00 | 0.00 | 0.00 | 4.02 |
2197 | 2817 | 1.408969 | TGCGGTATGATACAGGCTGA | 58.591 | 50.000 | 23.66 | 5.22 | 32.85 | 4.26 |
2200 | 2820 | 1.602377 | GGTTTGCGGTATGATACAGGC | 59.398 | 52.381 | 4.83 | 7.78 | 0.00 | 4.85 |
2214 | 2834 | 4.938226 | AGCTCTCTGTAATAACTGGTTTGC | 59.062 | 41.667 | 0.00 | 0.00 | 0.00 | 3.68 |
2244 | 2864 | 7.255977 | GCTTAATTTTTCAAAGTCCCTCTCCTT | 60.256 | 37.037 | 0.00 | 0.00 | 0.00 | 3.36 |
2265 | 2885 | 8.039603 | ACGATGAACATCAAATAGTTGCTTAA | 57.960 | 30.769 | 13.92 | 0.00 | 37.69 | 1.85 |
2447 | 3067 | 3.608316 | AAACTCAAGCCAAGTGCAAAA | 57.392 | 38.095 | 0.00 | 0.00 | 44.83 | 2.44 |
2471 | 3091 | 7.227156 | TGAAGAAGAAACTAGCTTGAAGGATT | 58.773 | 34.615 | 1.04 | 0.00 | 0.00 | 3.01 |
2472 | 3092 | 6.773638 | TGAAGAAGAAACTAGCTTGAAGGAT | 58.226 | 36.000 | 1.04 | 0.00 | 0.00 | 3.24 |
2475 | 3095 | 7.721286 | TTCTGAAGAAGAAACTAGCTTGAAG | 57.279 | 36.000 | 1.04 | 0.00 | 42.09 | 3.02 |
2785 | 3909 | 2.036733 | TCCAACAGAACTGGTTCGTAGG | 59.963 | 50.000 | 6.76 | 8.64 | 43.97 | 3.18 |
2850 | 3974 | 2.039746 | TCCCCTGAAATGTACACCACAG | 59.960 | 50.000 | 0.00 | 7.79 | 41.51 | 3.66 |
2918 | 4043 | 5.204409 | TCAGTTTTCGTTCTACTAAGCCA | 57.796 | 39.130 | 0.00 | 0.00 | 0.00 | 4.75 |
2932 | 4057 | 3.123621 | CGCACCTCATGTACTCAGTTTTC | 59.876 | 47.826 | 0.00 | 0.00 | 0.00 | 2.29 |
3004 | 4132 | 2.696526 | AGGTGTCCTTCTGAGGTACA | 57.303 | 50.000 | 0.00 | 0.00 | 43.97 | 2.90 |
3084 | 4213 | 3.017048 | TCATCCATCCGGCTTTGATTT | 57.983 | 42.857 | 0.00 | 0.00 | 0.00 | 2.17 |
3143 | 4276 | 4.405680 | AGAACCTGCCTTTTAGCTTTTGTT | 59.594 | 37.500 | 0.00 | 0.00 | 0.00 | 2.83 |
3220 | 4355 | 3.559238 | ATTGTTGAACATGTCGCCTTC | 57.441 | 42.857 | 0.00 | 0.00 | 0.00 | 3.46 |
3255 | 4390 | 3.198068 | ACATCCATCTCAACATGCGTAC | 58.802 | 45.455 | 0.00 | 0.00 | 0.00 | 3.67 |
3277 | 4412 | 0.961753 | GTCCTTTCCTGTTTGGCCAG | 59.038 | 55.000 | 5.11 | 0.00 | 35.26 | 4.85 |
3284 | 4419 | 1.759236 | GACCCGGTCCTTTCCTGTT | 59.241 | 57.895 | 6.25 | 0.00 | 0.00 | 3.16 |
3339 | 4474 | 3.006859 | TGGACAAGCTTCTCTTCAATCGA | 59.993 | 43.478 | 0.00 | 0.00 | 31.27 | 3.59 |
3368 | 4503 | 9.559732 | TGTTGTATATGTCCAAATCATCTTAGG | 57.440 | 33.333 | 0.00 | 0.00 | 0.00 | 2.69 |
3377 | 4512 | 5.125417 | GCACCTGTGTTGTATATGTCCAAAT | 59.875 | 40.000 | 0.00 | 0.00 | 0.00 | 2.32 |
3394 | 4529 | 1.377202 | CCGTTGGCTATGCACCTGT | 60.377 | 57.895 | 0.00 | 0.00 | 0.00 | 4.00 |
3407 | 6608 | 3.896648 | ATCAGCACACTTTAACCGTTG | 57.103 | 42.857 | 0.00 | 0.00 | 0.00 | 4.10 |
3530 | 6740 | 0.870307 | ATAGCTAACTTCCACGCGCG | 60.870 | 55.000 | 30.96 | 30.96 | 0.00 | 6.86 |
3617 | 6827 | 7.838884 | ACTACTACTAAGCCTTTAGTTCCAAG | 58.161 | 38.462 | 3.93 | 0.00 | 45.57 | 3.61 |
3774 | 7000 | 8.066595 | CGATATGAGCAAAGAACTGGAATAAAG | 58.933 | 37.037 | 0.00 | 0.00 | 0.00 | 1.85 |
4115 | 7466 | 4.104102 | AGGGGATACTGAACAACTGACAAA | 59.896 | 41.667 | 0.00 | 0.00 | 0.00 | 2.83 |
4154 | 7505 | 0.963355 | TGCCAGGTTAAATCACGCCC | 60.963 | 55.000 | 0.00 | 0.00 | 0.00 | 6.13 |
4176 | 7527 | 6.223852 | ACAGACAAAGTTCAATCTACGTGAT | 58.776 | 36.000 | 0.00 | 0.00 | 36.89 | 3.06 |
4259 | 7610 | 6.877236 | AGTTACCCATTAAATTCATGCTTGG | 58.123 | 36.000 | 0.00 | 0.00 | 0.00 | 3.61 |
4264 | 7615 | 7.497909 | ACGGAGTAGTTACCCATTAAATTCATG | 59.502 | 37.037 | 0.00 | 0.00 | 41.94 | 3.07 |
4280 | 7631 | 7.178097 | AGACTTGTATTTAGGAACGGAGTAGTT | 59.822 | 37.037 | 0.00 | 0.00 | 45.00 | 2.24 |
4281 | 7632 | 6.662663 | AGACTTGTATTTAGGAACGGAGTAGT | 59.337 | 38.462 | 0.00 | 0.00 | 45.00 | 2.73 |
4283 | 7634 | 7.472334 | AAGACTTGTATTTAGGAACGGAGTA | 57.528 | 36.000 | 0.00 | 0.00 | 45.00 | 2.59 |
4358 | 7745 | 4.093998 | AGCAAAATGAGTGAATCTACGCTG | 59.906 | 41.667 | 0.00 | 0.00 | 0.00 | 5.18 |
4365 | 7774 | 5.065218 | ACATACGGAGCAAAATGAGTGAATC | 59.935 | 40.000 | 0.00 | 0.00 | 0.00 | 2.52 |
4366 | 7775 | 4.943705 | ACATACGGAGCAAAATGAGTGAAT | 59.056 | 37.500 | 0.00 | 0.00 | 0.00 | 2.57 |
4367 | 7776 | 4.323417 | ACATACGGAGCAAAATGAGTGAA | 58.677 | 39.130 | 0.00 | 0.00 | 0.00 | 3.18 |
4368 | 7777 | 3.937814 | ACATACGGAGCAAAATGAGTGA | 58.062 | 40.909 | 0.00 | 0.00 | 0.00 | 3.41 |
4369 | 7778 | 4.870426 | ACTACATACGGAGCAAAATGAGTG | 59.130 | 41.667 | 0.00 | 0.00 | 0.00 | 3.51 |
4370 | 7779 | 5.086104 | ACTACATACGGAGCAAAATGAGT | 57.914 | 39.130 | 0.00 | 0.00 | 0.00 | 3.41 |
4371 | 7780 | 4.508124 | GGACTACATACGGAGCAAAATGAG | 59.492 | 45.833 | 0.00 | 0.00 | 0.00 | 2.90 |
4372 | 7781 | 4.439057 | GGACTACATACGGAGCAAAATGA | 58.561 | 43.478 | 0.00 | 0.00 | 0.00 | 2.57 |
4373 | 7782 | 3.560068 | GGGACTACATACGGAGCAAAATG | 59.440 | 47.826 | 0.00 | 0.00 | 0.00 | 2.32 |
4374 | 7783 | 3.454812 | AGGGACTACATACGGAGCAAAAT | 59.545 | 43.478 | 0.00 | 0.00 | 36.02 | 1.82 |
4375 | 7784 | 2.835764 | AGGGACTACATACGGAGCAAAA | 59.164 | 45.455 | 0.00 | 0.00 | 36.02 | 2.44 |
4376 | 7785 | 2.463752 | AGGGACTACATACGGAGCAAA | 58.536 | 47.619 | 0.00 | 0.00 | 36.02 | 3.68 |
4377 | 7786 | 2.154567 | AGGGACTACATACGGAGCAA | 57.845 | 50.000 | 0.00 | 0.00 | 36.02 | 3.91 |
4378 | 7787 | 2.154567 | AAGGGACTACATACGGAGCA | 57.845 | 50.000 | 0.00 | 0.00 | 38.49 | 4.26 |
4379 | 7788 | 4.557205 | CAATAAGGGACTACATACGGAGC | 58.443 | 47.826 | 0.00 | 0.00 | 38.49 | 4.70 |
4380 | 7789 | 4.831155 | TCCAATAAGGGACTACATACGGAG | 59.169 | 45.833 | 0.00 | 0.00 | 38.49 | 4.63 |
4381 | 7790 | 4.806892 | TCCAATAAGGGACTACATACGGA | 58.193 | 43.478 | 0.00 | 0.00 | 38.49 | 4.69 |
4382 | 7791 | 5.540400 | TTCCAATAAGGGACTACATACGG | 57.460 | 43.478 | 0.00 | 0.00 | 38.49 | 4.02 |
4383 | 7792 | 6.994221 | AGATTCCAATAAGGGACTACATACG | 58.006 | 40.000 | 0.00 | 0.00 | 38.49 | 3.06 |
4384 | 7793 | 8.196378 | AGAGATTCCAATAAGGGACTACATAC | 57.804 | 38.462 | 0.00 | 0.00 | 38.49 | 2.39 |
4385 | 7794 | 9.892444 | TTAGAGATTCCAATAAGGGACTACATA | 57.108 | 33.333 | 0.00 | 0.00 | 38.49 | 2.29 |
4386 | 7795 | 8.798975 | TTAGAGATTCCAATAAGGGACTACAT | 57.201 | 34.615 | 0.00 | 0.00 | 38.49 | 2.29 |
4435 | 7844 | 7.725397 | TGCAATGCTTGGAATATAATTACTCCT | 59.275 | 33.333 | 6.82 | 0.00 | 0.00 | 3.69 |
4447 | 7856 | 3.005684 | TCGAACTTTGCAATGCTTGGAAT | 59.994 | 39.130 | 11.96 | 0.00 | 40.72 | 3.01 |
4513 | 7922 | 5.215160 | CAGCTGGTGTGTCAAAATAGAAAC | 58.785 | 41.667 | 5.57 | 0.00 | 0.00 | 2.78 |
4532 | 7941 | 6.889198 | TGCCTGATAGTAAAAGATAACAGCT | 58.111 | 36.000 | 0.00 | 0.00 | 0.00 | 4.24 |
5011 | 8421 | 5.643339 | AGATCTTTGCGTGATCGTAAATC | 57.357 | 39.130 | 4.66 | 1.90 | 46.47 | 2.17 |
5016 | 8426 | 6.447162 | TGATAATAGATCTTTGCGTGATCGT | 58.553 | 36.000 | 0.00 | 0.58 | 43.52 | 3.73 |
5021 | 8431 | 6.603237 | TGGTTGATAATAGATCTTTGCGTG | 57.397 | 37.500 | 0.00 | 0.00 | 0.00 | 5.34 |
5068 | 8478 | 6.161855 | TGGTTAATGTTACATTTGCCACAA | 57.838 | 33.333 | 20.84 | 6.83 | 0.00 | 3.33 |
5073 | 8483 | 7.417612 | AGATCGATGGTTAATGTTACATTTGC | 58.582 | 34.615 | 16.08 | 9.04 | 0.00 | 3.68 |
5106 | 8516 | 8.898761 | TGAGTAAAGTGATTTATTGTGTGTTGT | 58.101 | 29.630 | 0.00 | 0.00 | 0.00 | 3.32 |
5107 | 8517 | 9.385902 | CTGAGTAAAGTGATTTATTGTGTGTTG | 57.614 | 33.333 | 0.00 | 0.00 | 0.00 | 3.33 |
5155 | 8568 | 6.996509 | ACTTTAGTACAACTTTACCGATGGA | 58.003 | 36.000 | 0.00 | 0.00 | 0.00 | 3.41 |
5156 | 8569 | 7.385752 | TCAACTTTAGTACAACTTTACCGATGG | 59.614 | 37.037 | 0.00 | 0.00 | 0.00 | 3.51 |
5157 | 8570 | 8.219105 | GTCAACTTTAGTACAACTTTACCGATG | 58.781 | 37.037 | 0.00 | 0.00 | 0.00 | 3.84 |
5158 | 8571 | 7.927629 | TGTCAACTTTAGTACAACTTTACCGAT | 59.072 | 33.333 | 0.00 | 0.00 | 0.00 | 4.18 |
5160 | 8573 | 7.223387 | AGTGTCAACTTTAGTACAACTTTACCG | 59.777 | 37.037 | 0.00 | 0.00 | 30.14 | 4.02 |
5161 | 8574 | 8.429493 | AGTGTCAACTTTAGTACAACTTTACC | 57.571 | 34.615 | 0.00 | 0.00 | 30.14 | 2.85 |
5171 | 8584 | 9.059260 | GTCCCAAAATAAGTGTCAACTTTAGTA | 57.941 | 33.333 | 0.00 | 0.00 | 44.47 | 1.82 |
5172 | 8585 | 7.255001 | CGTCCCAAAATAAGTGTCAACTTTAGT | 60.255 | 37.037 | 0.00 | 0.00 | 44.47 | 2.24 |
5173 | 8586 | 7.075741 | CGTCCCAAAATAAGTGTCAACTTTAG | 58.924 | 38.462 | 0.00 | 0.00 | 44.47 | 1.85 |
5174 | 8587 | 6.016943 | CCGTCCCAAAATAAGTGTCAACTTTA | 60.017 | 38.462 | 0.00 | 0.00 | 44.47 | 1.85 |
5175 | 8588 | 5.221165 | CCGTCCCAAAATAAGTGTCAACTTT | 60.221 | 40.000 | 0.00 | 0.00 | 44.47 | 2.66 |
5177 | 8590 | 3.818773 | CCGTCCCAAAATAAGTGTCAACT | 59.181 | 43.478 | 0.00 | 0.00 | 38.71 | 3.16 |
5178 | 8591 | 3.816523 | TCCGTCCCAAAATAAGTGTCAAC | 59.183 | 43.478 | 0.00 | 0.00 | 0.00 | 3.18 |
5179 | 8592 | 4.069304 | CTCCGTCCCAAAATAAGTGTCAA | 58.931 | 43.478 | 0.00 | 0.00 | 0.00 | 3.18 |
5180 | 8593 | 3.558321 | CCTCCGTCCCAAAATAAGTGTCA | 60.558 | 47.826 | 0.00 | 0.00 | 0.00 | 3.58 |
5181 | 8594 | 3.007635 | CCTCCGTCCCAAAATAAGTGTC | 58.992 | 50.000 | 0.00 | 0.00 | 0.00 | 3.67 |
5182 | 8595 | 2.290705 | CCCTCCGTCCCAAAATAAGTGT | 60.291 | 50.000 | 0.00 | 0.00 | 0.00 | 3.55 |
5183 | 8596 | 2.026636 | TCCCTCCGTCCCAAAATAAGTG | 60.027 | 50.000 | 0.00 | 0.00 | 0.00 | 3.16 |
5184 | 8597 | 2.238898 | CTCCCTCCGTCCCAAAATAAGT | 59.761 | 50.000 | 0.00 | 0.00 | 0.00 | 2.24 |
5185 | 8598 | 2.238898 | ACTCCCTCCGTCCCAAAATAAG | 59.761 | 50.000 | 0.00 | 0.00 | 0.00 | 1.73 |
5186 | 8599 | 2.271777 | ACTCCCTCCGTCCCAAAATAA | 58.728 | 47.619 | 0.00 | 0.00 | 0.00 | 1.40 |
5187 | 8600 | 1.961133 | ACTCCCTCCGTCCCAAAATA | 58.039 | 50.000 | 0.00 | 0.00 | 0.00 | 1.40 |
5188 | 8601 | 1.558294 | GTACTCCCTCCGTCCCAAAAT | 59.442 | 52.381 | 0.00 | 0.00 | 0.00 | 1.82 |
5189 | 8602 | 0.978907 | GTACTCCCTCCGTCCCAAAA | 59.021 | 55.000 | 0.00 | 0.00 | 0.00 | 2.44 |
5190 | 8603 | 0.115745 | AGTACTCCCTCCGTCCCAAA | 59.884 | 55.000 | 0.00 | 0.00 | 0.00 | 3.28 |
5191 | 8604 | 0.115745 | AAGTACTCCCTCCGTCCCAA | 59.884 | 55.000 | 0.00 | 0.00 | 0.00 | 4.12 |
5192 | 8605 | 0.115745 | AAAGTACTCCCTCCGTCCCA | 59.884 | 55.000 | 0.00 | 0.00 | 0.00 | 4.37 |
5193 | 8606 | 1.273759 | AAAAGTACTCCCTCCGTCCC | 58.726 | 55.000 | 0.00 | 0.00 | 0.00 | 4.46 |
5194 | 8607 | 4.439968 | CAATAAAAGTACTCCCTCCGTCC | 58.560 | 47.826 | 0.00 | 0.00 | 0.00 | 4.79 |
5195 | 8608 | 4.081254 | ACCAATAAAAGTACTCCCTCCGTC | 60.081 | 45.833 | 0.00 | 0.00 | 0.00 | 4.79 |
5196 | 8609 | 3.842436 | ACCAATAAAAGTACTCCCTCCGT | 59.158 | 43.478 | 0.00 | 0.00 | 0.00 | 4.69 |
5197 | 8610 | 4.482952 | ACCAATAAAAGTACTCCCTCCG | 57.517 | 45.455 | 0.00 | 0.00 | 0.00 | 4.63 |
5198 | 8611 | 6.314648 | CGTTAACCAATAAAAGTACTCCCTCC | 59.685 | 42.308 | 0.00 | 0.00 | 0.00 | 4.30 |
5199 | 8612 | 7.099120 | TCGTTAACCAATAAAAGTACTCCCTC | 58.901 | 38.462 | 0.00 | 0.00 | 0.00 | 4.30 |
5200 | 8613 | 7.008021 | TCGTTAACCAATAAAAGTACTCCCT | 57.992 | 36.000 | 0.00 | 0.00 | 0.00 | 4.20 |
5201 | 8614 | 7.099120 | TCTCGTTAACCAATAAAAGTACTCCC | 58.901 | 38.462 | 0.00 | 0.00 | 0.00 | 4.30 |
5202 | 8615 | 8.713737 | ATCTCGTTAACCAATAAAAGTACTCC | 57.286 | 34.615 | 0.00 | 0.00 | 0.00 | 3.85 |
5203 | 8616 | 8.815189 | GGATCTCGTTAACCAATAAAAGTACTC | 58.185 | 37.037 | 0.00 | 0.00 | 0.00 | 2.59 |
5204 | 8617 | 8.316214 | TGGATCTCGTTAACCAATAAAAGTACT | 58.684 | 33.333 | 0.00 | 0.00 | 0.00 | 2.73 |
5205 | 8618 | 8.385858 | GTGGATCTCGTTAACCAATAAAAGTAC | 58.614 | 37.037 | 0.00 | 0.00 | 34.11 | 2.73 |
5206 | 8619 | 8.095792 | TGTGGATCTCGTTAACCAATAAAAGTA | 58.904 | 33.333 | 0.00 | 0.00 | 34.11 | 2.24 |
5207 | 8620 | 6.938030 | TGTGGATCTCGTTAACCAATAAAAGT | 59.062 | 34.615 | 0.00 | 0.00 | 34.11 | 2.66 |
5208 | 8621 | 7.372451 | TGTGGATCTCGTTAACCAATAAAAG | 57.628 | 36.000 | 0.00 | 0.00 | 34.11 | 2.27 |
5210 | 8623 | 7.662258 | TCTTTGTGGATCTCGTTAACCAATAAA | 59.338 | 33.333 | 0.00 | 0.00 | 34.11 | 1.40 |
5214 | 8627 | 4.963373 | TCTTTGTGGATCTCGTTAACCAA | 58.037 | 39.130 | 0.00 | 0.00 | 34.11 | 3.67 |
5217 | 8630 | 9.704098 | GATTTATTCTTTGTGGATCTCGTTAAC | 57.296 | 33.333 | 0.00 | 0.00 | 0.00 | 2.01 |
5218 | 8631 | 9.443323 | TGATTTATTCTTTGTGGATCTCGTTAA | 57.557 | 29.630 | 0.00 | 0.00 | 0.00 | 2.01 |
5221 | 8634 | 7.921786 | TTGATTTATTCTTTGTGGATCTCGT | 57.078 | 32.000 | 0.00 | 0.00 | 0.00 | 4.18 |
5223 | 8636 | 9.947669 | CAGATTGATTTATTCTTTGTGGATCTC | 57.052 | 33.333 | 0.00 | 0.00 | 0.00 | 2.75 |
5224 | 8637 | 8.910944 | CCAGATTGATTTATTCTTTGTGGATCT | 58.089 | 33.333 | 0.00 | 0.00 | 0.00 | 2.75 |
5230 | 8643 | 8.562892 | CGCTATCCAGATTGATTTATTCTTTGT | 58.437 | 33.333 | 0.00 | 0.00 | 0.00 | 2.83 |
5238 | 8651 | 4.065088 | GGCACGCTATCCAGATTGATTTA | 58.935 | 43.478 | 0.00 | 0.00 | 0.00 | 1.40 |
5243 | 8656 | 0.107456 | AGGGCACGCTATCCAGATTG | 59.893 | 55.000 | 0.00 | 0.00 | 0.00 | 2.67 |
5246 | 8659 | 1.264749 | ACAAGGGCACGCTATCCAGA | 61.265 | 55.000 | 0.00 | 0.00 | 0.00 | 3.86 |
5247 | 8660 | 0.811616 | GACAAGGGCACGCTATCCAG | 60.812 | 60.000 | 0.00 | 0.00 | 0.00 | 3.86 |
5248 | 8661 | 1.220749 | GACAAGGGCACGCTATCCA | 59.779 | 57.895 | 0.00 | 0.00 | 0.00 | 3.41 |
5249 | 8662 | 1.090052 | GTGACAAGGGCACGCTATCC | 61.090 | 60.000 | 0.00 | 0.00 | 0.00 | 2.59 |
5250 | 8663 | 0.108138 | AGTGACAAGGGCACGCTATC | 60.108 | 55.000 | 0.00 | 0.00 | 41.04 | 2.08 |
5251 | 8664 | 0.324943 | AAGTGACAAGGGCACGCTAT | 59.675 | 50.000 | 0.00 | 0.00 | 41.04 | 2.97 |
5253 | 8666 | 1.598130 | GAAGTGACAAGGGCACGCT | 60.598 | 57.895 | 0.00 | 0.00 | 41.04 | 5.07 |
5255 | 8668 | 1.845809 | GCAGAAGTGACAAGGGCACG | 61.846 | 60.000 | 0.00 | 0.00 | 41.04 | 5.34 |
5256 | 8669 | 1.518903 | GGCAGAAGTGACAAGGGCAC | 61.519 | 60.000 | 0.00 | 0.00 | 36.53 | 5.01 |
5257 | 8670 | 1.228245 | GGCAGAAGTGACAAGGGCA | 60.228 | 57.895 | 0.00 | 0.00 | 0.00 | 5.36 |
5285 | 8702 | 2.173519 | AGCACAAGAAATCATGGTGGG | 58.826 | 47.619 | 0.00 | 0.00 | 0.00 | 4.61 |
5301 | 8718 | 5.047943 | TCCTAGAACTTCACTTGTCTAGCAC | 60.048 | 44.000 | 0.00 | 0.00 | 0.00 | 4.40 |
5309 | 8726 | 5.059833 | AGCAAGTTCCTAGAACTTCACTTG | 58.940 | 41.667 | 17.53 | 9.85 | 42.60 | 3.16 |
5311 | 8728 | 4.965200 | AGCAAGTTCCTAGAACTTCACT | 57.035 | 40.909 | 17.53 | 14.96 | 38.32 | 3.41 |
5383 | 8801 | 7.388437 | AGCATTGAAAAGCAAGAAATATTCCA | 58.612 | 30.769 | 0.00 | 0.00 | 40.42 | 3.53 |
5389 | 8807 | 8.092687 | ACAGATTAGCATTGAAAAGCAAGAAAT | 58.907 | 29.630 | 0.00 | 0.00 | 40.42 | 2.17 |
5396 | 8815 | 7.642978 | CACTGATACAGATTAGCATTGAAAAGC | 59.357 | 37.037 | 5.76 | 0.00 | 35.18 | 3.51 |
5397 | 8816 | 7.642978 | GCACTGATACAGATTAGCATTGAAAAG | 59.357 | 37.037 | 5.76 | 0.00 | 35.18 | 2.27 |
5399 | 8818 | 6.825213 | AGCACTGATACAGATTAGCATTGAAA | 59.175 | 34.615 | 5.76 | 0.00 | 35.18 | 2.69 |
5400 | 8819 | 6.351711 | AGCACTGATACAGATTAGCATTGAA | 58.648 | 36.000 | 5.76 | 0.00 | 35.18 | 2.69 |
5404 | 8823 | 4.592351 | AGGAGCACTGATACAGATTAGCAT | 59.408 | 41.667 | 5.76 | 0.00 | 35.18 | 3.79 |
5405 | 8824 | 3.963374 | AGGAGCACTGATACAGATTAGCA | 59.037 | 43.478 | 5.76 | 0.00 | 35.18 | 3.49 |
5406 | 8825 | 4.599047 | AGGAGCACTGATACAGATTAGC | 57.401 | 45.455 | 5.76 | 4.50 | 35.18 | 3.09 |
5408 | 8827 | 6.488344 | CAGAGTAGGAGCACTGATACAGATTA | 59.512 | 42.308 | 5.76 | 0.00 | 35.18 | 1.75 |
5409 | 8828 | 5.301551 | CAGAGTAGGAGCACTGATACAGATT | 59.698 | 44.000 | 5.76 | 0.00 | 35.18 | 2.40 |
5410 | 8829 | 4.826733 | CAGAGTAGGAGCACTGATACAGAT | 59.173 | 45.833 | 5.76 | 0.00 | 35.18 | 2.90 |
5411 | 8830 | 4.203226 | CAGAGTAGGAGCACTGATACAGA | 58.797 | 47.826 | 5.76 | 0.00 | 35.18 | 3.41 |
5412 | 8831 | 3.243367 | GCAGAGTAGGAGCACTGATACAG | 60.243 | 52.174 | 0.00 | 0.00 | 37.52 | 2.74 |
5413 | 8832 | 2.690497 | GCAGAGTAGGAGCACTGATACA | 59.310 | 50.000 | 0.00 | 0.00 | 32.90 | 2.29 |
5414 | 8833 | 2.690497 | TGCAGAGTAGGAGCACTGATAC | 59.310 | 50.000 | 0.00 | 0.00 | 32.55 | 2.24 |
5415 | 8834 | 3.018423 | TGCAGAGTAGGAGCACTGATA | 57.982 | 47.619 | 0.00 | 0.00 | 32.55 | 2.15 |
5416 | 8835 | 1.857965 | TGCAGAGTAGGAGCACTGAT | 58.142 | 50.000 | 0.00 | 0.00 | 32.55 | 2.90 |
5417 | 8836 | 1.753649 | GATGCAGAGTAGGAGCACTGA | 59.246 | 52.381 | 0.00 | 0.00 | 41.60 | 3.41 |
5418 | 8837 | 1.535649 | CGATGCAGAGTAGGAGCACTG | 60.536 | 57.143 | 0.00 | 0.00 | 41.60 | 3.66 |
5419 | 8838 | 0.743688 | CGATGCAGAGTAGGAGCACT | 59.256 | 55.000 | 0.00 | 0.00 | 41.60 | 4.40 |
5420 | 8839 | 0.457851 | ACGATGCAGAGTAGGAGCAC | 59.542 | 55.000 | 0.00 | 0.00 | 41.60 | 4.40 |
5421 | 8840 | 1.676529 | GTACGATGCAGAGTAGGAGCA | 59.323 | 52.381 | 4.53 | 0.00 | 43.14 | 4.26 |
5422 | 8841 | 1.950909 | AGTACGATGCAGAGTAGGAGC | 59.049 | 52.381 | 4.53 | 0.00 | 0.00 | 4.70 |
5426 | 8845 | 5.524284 | AGCAATAAGTACGATGCAGAGTAG | 58.476 | 41.667 | 14.51 | 0.00 | 41.18 | 2.57 |
5437 | 8856 | 4.028383 | CCGCAATTCAAGCAATAAGTACG | 58.972 | 43.478 | 0.00 | 0.00 | 0.00 | 3.67 |
5442 | 8861 | 4.511617 | TTGTCCGCAATTCAAGCAATAA | 57.488 | 36.364 | 0.00 | 0.00 | 0.00 | 1.40 |
5458 | 8877 | 6.128309 | GCCATTTAAAACCATGACATTTGTCC | 60.128 | 38.462 | 8.16 | 0.00 | 44.15 | 4.02 |
5465 | 8884 | 3.260380 | CCCTGCCATTTAAAACCATGACA | 59.740 | 43.478 | 0.00 | 0.00 | 0.00 | 3.58 |
5466 | 8885 | 3.513515 | TCCCTGCCATTTAAAACCATGAC | 59.486 | 43.478 | 0.00 | 0.00 | 0.00 | 3.06 |
5467 | 8886 | 3.784178 | TCCCTGCCATTTAAAACCATGA | 58.216 | 40.909 | 0.00 | 0.00 | 0.00 | 3.07 |
5468 | 8887 | 4.758773 | ATCCCTGCCATTTAAAACCATG | 57.241 | 40.909 | 0.00 | 0.00 | 0.00 | 3.66 |
5469 | 8888 | 5.626578 | CGAAATCCCTGCCATTTAAAACCAT | 60.627 | 40.000 | 0.00 | 0.00 | 0.00 | 3.55 |
5470 | 8889 | 4.322349 | CGAAATCCCTGCCATTTAAAACCA | 60.322 | 41.667 | 0.00 | 0.00 | 0.00 | 3.67 |
5471 | 8890 | 4.180817 | CGAAATCCCTGCCATTTAAAACC | 58.819 | 43.478 | 0.00 | 0.00 | 0.00 | 3.27 |
5491 | 8911 | 2.627945 | GGACCAGATGCAACATAACGA | 58.372 | 47.619 | 0.00 | 0.00 | 0.00 | 3.85 |
5599 | 9019 | 5.869579 | AGGTGTGTCAACTATGAACTTGAT | 58.130 | 37.500 | 0.00 | 0.00 | 37.30 | 2.57 |
5607 | 9027 | 3.006859 | TGACTGGAGGTGTGTCAACTATG | 59.993 | 47.826 | 0.00 | 0.00 | 37.71 | 2.23 |
5608 | 9028 | 3.239449 | TGACTGGAGGTGTGTCAACTAT | 58.761 | 45.455 | 0.00 | 0.00 | 37.71 | 2.12 |
5612 | 9032 | 2.437651 | TCAATGACTGGAGGTGTGTCAA | 59.562 | 45.455 | 0.00 | 0.00 | 42.80 | 3.18 |
5715 | 9135 | 7.192852 | AGAGGCAGAAGAATTTATTCTCTCA | 57.807 | 36.000 | 17.68 | 0.00 | 45.83 | 3.27 |
5716 | 9136 | 7.768120 | TGAAGAGGCAGAAGAATTTATTCTCTC | 59.232 | 37.037 | 11.64 | 11.64 | 45.83 | 3.20 |
5724 | 9144 | 5.380043 | TGAAGTGAAGAGGCAGAAGAATTT | 58.620 | 37.500 | 0.00 | 0.00 | 0.00 | 1.82 |
5759 | 9189 | 8.560124 | AAGGAGGAGATAGTATGAAGAAATGT | 57.440 | 34.615 | 0.00 | 0.00 | 0.00 | 2.71 |
5777 | 9207 | 5.824624 | CCACGTATAGTAGTACAAAGGAGGA | 59.175 | 44.000 | 2.52 | 0.00 | 0.00 | 3.71 |
5779 | 9209 | 5.298777 | AGCCACGTATAGTAGTACAAAGGAG | 59.701 | 44.000 | 2.52 | 0.00 | 0.00 | 3.69 |
5790 | 9220 | 8.762481 | ATGGATGATTATAGCCACGTATAGTA | 57.238 | 34.615 | 0.00 | 0.00 | 32.42 | 1.82 |
5791 | 9221 | 7.661536 | ATGGATGATTATAGCCACGTATAGT | 57.338 | 36.000 | 0.00 | 0.00 | 32.42 | 2.12 |
5792 | 9222 | 7.981789 | ACAATGGATGATTATAGCCACGTATAG | 59.018 | 37.037 | 0.00 | 0.00 | 32.42 | 1.31 |
5793 | 9223 | 7.847096 | ACAATGGATGATTATAGCCACGTATA | 58.153 | 34.615 | 0.00 | 0.00 | 32.42 | 1.47 |
5794 | 9224 | 6.711277 | ACAATGGATGATTATAGCCACGTAT | 58.289 | 36.000 | 0.00 | 0.00 | 32.42 | 3.06 |
5797 | 9227 | 6.650807 | ACTTACAATGGATGATTATAGCCACG | 59.349 | 38.462 | 0.00 | 0.00 | 32.42 | 4.94 |
5798 | 9228 | 7.986085 | ACTTACAATGGATGATTATAGCCAC | 57.014 | 36.000 | 0.00 | 0.00 | 32.42 | 5.01 |
5799 | 9229 | 7.998383 | ACAACTTACAATGGATGATTATAGCCA | 59.002 | 33.333 | 0.00 | 0.00 | 34.45 | 4.75 |
5800 | 9230 | 8.396272 | ACAACTTACAATGGATGATTATAGCC | 57.604 | 34.615 | 0.00 | 0.00 | 0.00 | 3.93 |
5805 | 9235 | 9.733556 | ACTGTTACAACTTACAATGGATGATTA | 57.266 | 29.630 | 0.00 | 0.00 | 0.00 | 1.75 |
5821 | 9251 | 5.127356 | ACTCTATCCCTGCTACTGTTACAAC | 59.873 | 44.000 | 0.00 | 0.00 | 0.00 | 3.32 |
5822 | 9252 | 5.269991 | ACTCTATCCCTGCTACTGTTACAA | 58.730 | 41.667 | 0.00 | 0.00 | 0.00 | 2.41 |
5823 | 9253 | 4.868268 | ACTCTATCCCTGCTACTGTTACA | 58.132 | 43.478 | 0.00 | 0.00 | 0.00 | 2.41 |
5824 | 9254 | 4.278919 | GGACTCTATCCCTGCTACTGTTAC | 59.721 | 50.000 | 0.00 | 0.00 | 42.46 | 2.50 |
5825 | 9255 | 4.471548 | GGACTCTATCCCTGCTACTGTTA | 58.528 | 47.826 | 0.00 | 0.00 | 42.46 | 2.41 |
5826 | 9256 | 3.301274 | GGACTCTATCCCTGCTACTGTT | 58.699 | 50.000 | 0.00 | 0.00 | 42.46 | 3.16 |
5827 | 9257 | 2.750135 | CGGACTCTATCCCTGCTACTGT | 60.750 | 54.545 | 0.00 | 0.00 | 46.04 | 3.55 |
5828 | 9258 | 1.883275 | CGGACTCTATCCCTGCTACTG | 59.117 | 57.143 | 0.00 | 0.00 | 46.04 | 2.74 |
5829 | 9259 | 1.495574 | ACGGACTCTATCCCTGCTACT | 59.504 | 52.381 | 0.00 | 0.00 | 46.04 | 2.57 |
5830 | 9260 | 1.881324 | GACGGACTCTATCCCTGCTAC | 59.119 | 57.143 | 0.00 | 0.00 | 46.04 | 3.58 |
5831 | 9261 | 1.493446 | TGACGGACTCTATCCCTGCTA | 59.507 | 52.381 | 0.00 | 0.00 | 46.04 | 3.49 |
5832 | 9262 | 0.259065 | TGACGGACTCTATCCCTGCT | 59.741 | 55.000 | 0.00 | 0.00 | 46.04 | 4.24 |
5833 | 9263 | 1.112113 | TTGACGGACTCTATCCCTGC | 58.888 | 55.000 | 0.00 | 0.00 | 46.04 | 4.85 |
5834 | 9264 | 2.695666 | ACATTGACGGACTCTATCCCTG | 59.304 | 50.000 | 0.00 | 0.00 | 46.04 | 4.45 |
5859 | 9289 | 3.750371 | TGGCCTCAATAATATTCGGTGG | 58.250 | 45.455 | 3.32 | 0.00 | 0.00 | 4.61 |
5860 | 9290 | 5.964958 | AATGGCCTCAATAATATTCGGTG | 57.035 | 39.130 | 3.32 | 0.00 | 0.00 | 4.94 |
5865 | 9295 | 7.455638 | AGGCACAATAATGGCCTCAATAATATT | 59.544 | 33.333 | 3.32 | 0.00 | 44.81 | 1.28 |
5942 | 9372 | 3.501062 | TCGGATCTACTACCAATAGCACG | 59.499 | 47.826 | 0.00 | 0.00 | 30.75 | 5.34 |
6133 | 9565 | 1.367665 | GCGACGCGTCAATAATGCC | 60.368 | 57.895 | 35.71 | 9.36 | 36.47 | 4.40 |
6338 | 10718 | 3.507233 | CCTGCAATCAAAGAGGCAAAGTA | 59.493 | 43.478 | 0.00 | 0.00 | 35.59 | 2.24 |
6411 | 10819 | 3.244596 | GGTCCAATAGTTAGGAGGGATGC | 60.245 | 52.174 | 0.00 | 0.00 | 33.85 | 3.91 |
6429 | 12250 | 0.580104 | CGAGAACAAACACGTGGTCC | 59.420 | 55.000 | 21.57 | 3.84 | 35.71 | 4.46 |
6436 | 12257 | 6.585389 | AAGAACTTCTACGAGAACAAACAC | 57.415 | 37.500 | 0.00 | 0.00 | 29.89 | 3.32 |
6493 | 12317 | 3.033368 | TCGTCCATGAAACAACGATCA | 57.967 | 42.857 | 0.00 | 0.00 | 39.04 | 2.92 |
6496 | 12320 | 4.308265 | TGTAATCGTCCATGAAACAACGA | 58.692 | 39.130 | 0.00 | 2.07 | 46.73 | 3.85 |
6497 | 12321 | 4.435518 | CCTGTAATCGTCCATGAAACAACG | 60.436 | 45.833 | 0.00 | 0.00 | 36.50 | 4.10 |
6498 | 12322 | 4.671766 | GCCTGTAATCGTCCATGAAACAAC | 60.672 | 45.833 | 0.00 | 0.00 | 0.00 | 3.32 |
6499 | 12323 | 3.438781 | GCCTGTAATCGTCCATGAAACAA | 59.561 | 43.478 | 0.00 | 0.00 | 0.00 | 2.83 |
6500 | 12324 | 3.006940 | GCCTGTAATCGTCCATGAAACA | 58.993 | 45.455 | 0.00 | 0.00 | 0.00 | 2.83 |
6501 | 12325 | 2.030457 | CGCCTGTAATCGTCCATGAAAC | 59.970 | 50.000 | 0.00 | 0.00 | 0.00 | 2.78 |
6502 | 12326 | 2.276201 | CGCCTGTAATCGTCCATGAAA | 58.724 | 47.619 | 0.00 | 0.00 | 0.00 | 2.69 |
6503 | 12327 | 1.472552 | CCGCCTGTAATCGTCCATGAA | 60.473 | 52.381 | 0.00 | 0.00 | 0.00 | 2.57 |
6504 | 12328 | 0.104120 | CCGCCTGTAATCGTCCATGA | 59.896 | 55.000 | 0.00 | 0.00 | 0.00 | 3.07 |
6505 | 12329 | 0.179084 | ACCGCCTGTAATCGTCCATG | 60.179 | 55.000 | 0.00 | 0.00 | 0.00 | 3.66 |
6506 | 12330 | 0.539986 | AACCGCCTGTAATCGTCCAT | 59.460 | 50.000 | 0.00 | 0.00 | 0.00 | 3.41 |
6507 | 12331 | 0.322322 | AAACCGCCTGTAATCGTCCA | 59.678 | 50.000 | 0.00 | 0.00 | 0.00 | 4.02 |
6508 | 12332 | 1.395954 | GAAAACCGCCTGTAATCGTCC | 59.604 | 52.381 | 0.00 | 0.00 | 0.00 | 4.79 |
6509 | 12333 | 2.070783 | TGAAAACCGCCTGTAATCGTC | 58.929 | 47.619 | 0.00 | 0.00 | 0.00 | 4.20 |
6510 | 12334 | 2.172851 | TGAAAACCGCCTGTAATCGT | 57.827 | 45.000 | 0.00 | 0.00 | 0.00 | 3.73 |
6511 | 12335 | 2.031683 | GGATGAAAACCGCCTGTAATCG | 59.968 | 50.000 | 0.00 | 0.00 | 0.00 | 3.34 |
6512 | 12336 | 3.013921 | TGGATGAAAACCGCCTGTAATC | 58.986 | 45.455 | 0.00 | 0.00 | 0.00 | 1.75 |
6513 | 12337 | 3.016736 | CTGGATGAAAACCGCCTGTAAT | 58.983 | 45.455 | 0.00 | 0.00 | 0.00 | 1.89 |
6514 | 12338 | 2.432444 | CTGGATGAAAACCGCCTGTAA | 58.568 | 47.619 | 0.00 | 0.00 | 0.00 | 2.41 |
6515 | 12339 | 1.339631 | CCTGGATGAAAACCGCCTGTA | 60.340 | 52.381 | 0.00 | 0.00 | 0.00 | 2.74 |
6516 | 12340 | 0.609131 | CCTGGATGAAAACCGCCTGT | 60.609 | 55.000 | 0.00 | 0.00 | 0.00 | 4.00 |
6517 | 12341 | 0.609131 | ACCTGGATGAAAACCGCCTG | 60.609 | 55.000 | 0.00 | 0.00 | 0.00 | 4.85 |
6518 | 12342 | 0.609131 | CACCTGGATGAAAACCGCCT | 60.609 | 55.000 | 0.00 | 0.00 | 0.00 | 5.52 |
6519 | 12343 | 1.595093 | CCACCTGGATGAAAACCGCC | 61.595 | 60.000 | 0.00 | 0.00 | 37.39 | 6.13 |
6520 | 12344 | 0.893727 | ACCACCTGGATGAAAACCGC | 60.894 | 55.000 | 0.00 | 0.00 | 38.94 | 5.68 |
6521 | 12345 | 1.616159 | AACCACCTGGATGAAAACCG | 58.384 | 50.000 | 0.00 | 0.00 | 38.94 | 4.44 |
6522 | 12346 | 4.100963 | AGAAAAACCACCTGGATGAAAACC | 59.899 | 41.667 | 0.00 | 0.00 | 38.94 | 3.27 |
6523 | 12347 | 5.276461 | AGAAAAACCACCTGGATGAAAAC | 57.724 | 39.130 | 0.00 | 0.00 | 38.94 | 2.43 |
6524 | 12348 | 5.451242 | CGAAGAAAAACCACCTGGATGAAAA | 60.451 | 40.000 | 0.00 | 0.00 | 38.94 | 2.29 |
6525 | 12349 | 4.037446 | CGAAGAAAAACCACCTGGATGAAA | 59.963 | 41.667 | 0.00 | 0.00 | 38.94 | 2.69 |
6526 | 12350 | 3.568007 | CGAAGAAAAACCACCTGGATGAA | 59.432 | 43.478 | 0.00 | 0.00 | 38.94 | 2.57 |
6527 | 12351 | 3.146066 | CGAAGAAAAACCACCTGGATGA | 58.854 | 45.455 | 0.00 | 0.00 | 38.94 | 2.92 |
6528 | 12352 | 3.146066 | TCGAAGAAAAACCACCTGGATG | 58.854 | 45.455 | 0.00 | 0.00 | 38.94 | 3.51 |
6529 | 12353 | 3.412386 | CTCGAAGAAAAACCACCTGGAT | 58.588 | 45.455 | 0.00 | 0.00 | 35.23 | 3.41 |
6530 | 12354 | 2.486548 | CCTCGAAGAAAAACCACCTGGA | 60.487 | 50.000 | 0.00 | 0.00 | 35.23 | 3.86 |
6531 | 12355 | 1.880027 | CCTCGAAGAAAAACCACCTGG | 59.120 | 52.381 | 0.00 | 0.00 | 37.37 | 4.45 |
6532 | 12356 | 2.846193 | TCCTCGAAGAAAAACCACCTG | 58.154 | 47.619 | 0.00 | 0.00 | 34.09 | 4.00 |
6533 | 12357 | 3.790089 | ATCCTCGAAGAAAAACCACCT | 57.210 | 42.857 | 0.00 | 0.00 | 34.09 | 4.00 |
6534 | 12358 | 5.952526 | TTTATCCTCGAAGAAAAACCACC | 57.047 | 39.130 | 0.00 | 0.00 | 34.09 | 4.61 |
6535 | 12359 | 6.552629 | GGATTTATCCTCGAAGAAAAACCAC | 58.447 | 40.000 | 1.40 | 0.00 | 43.73 | 4.16 |
6536 | 12360 | 6.753107 | GGATTTATCCTCGAAGAAAAACCA | 57.247 | 37.500 | 1.40 | 0.00 | 43.73 | 3.67 |
6544 | 12368 | 6.539551 | TTCCGCCTGGATTTATCCTCGAAG | 62.540 | 50.000 | 10.00 | 0.00 | 45.91 | 3.79 |
6545 | 12369 | 4.760922 | TTCCGCCTGGATTTATCCTCGAA | 61.761 | 47.826 | 10.00 | 2.62 | 45.91 | 3.71 |
6546 | 12370 | 3.281383 | TTCCGCCTGGATTTATCCTCGA | 61.281 | 50.000 | 10.00 | 0.00 | 45.91 | 4.04 |
6547 | 12371 | 1.070134 | TTCCGCCTGGATTTATCCTCG | 59.930 | 52.381 | 10.00 | 9.90 | 45.91 | 4.63 |
6548 | 12372 | 2.930826 | TTCCGCCTGGATTTATCCTC | 57.069 | 50.000 | 10.00 | 0.00 | 45.91 | 3.71 |
6549 | 12373 | 3.662759 | TTTTCCGCCTGGATTTATCCT | 57.337 | 42.857 | 10.00 | 0.00 | 45.91 | 3.24 |
6550 | 12374 | 4.937201 | AATTTTCCGCCTGGATTTATCC | 57.063 | 40.909 | 0.00 | 1.66 | 45.91 | 2.59 |
6551 | 12375 | 9.406828 | GTAATAAATTTTCCGCCTGGATTTATC | 57.593 | 33.333 | 0.00 | 0.00 | 45.91 | 1.75 |
6552 | 12376 | 8.079809 | CGTAATAAATTTTCCGCCTGGATTTAT | 58.920 | 33.333 | 0.00 | 0.56 | 45.91 | 1.40 |
6553 | 12377 | 7.419204 | CGTAATAAATTTTCCGCCTGGATTTA | 58.581 | 34.615 | 0.00 | 0.00 | 45.91 | 1.40 |
6554 | 12378 | 6.270064 | CGTAATAAATTTTCCGCCTGGATTT | 58.730 | 36.000 | 0.00 | 0.00 | 45.91 | 2.17 |
6555 | 12379 | 5.221165 | CCGTAATAAATTTTCCGCCTGGATT | 60.221 | 40.000 | 0.00 | 0.00 | 45.91 | 3.01 |
6556 | 12380 | 4.277423 | CCGTAATAAATTTTCCGCCTGGAT | 59.723 | 41.667 | 0.00 | 0.00 | 45.91 | 3.41 |
6557 | 12381 | 3.628487 | CCGTAATAAATTTTCCGCCTGGA | 59.372 | 43.478 | 0.00 | 0.00 | 44.61 | 3.86 |
6558 | 12382 | 3.243267 | CCCGTAATAAATTTTCCGCCTGG | 60.243 | 47.826 | 0.00 | 0.00 | 0.00 | 4.45 |
6559 | 12383 | 3.794138 | GCCCGTAATAAATTTTCCGCCTG | 60.794 | 47.826 | 0.00 | 0.00 | 0.00 | 4.85 |
6560 | 12384 | 2.359848 | GCCCGTAATAAATTTTCCGCCT | 59.640 | 45.455 | 0.00 | 0.00 | 0.00 | 5.52 |
6561 | 12385 | 2.734670 | GCCCGTAATAAATTTTCCGCC | 58.265 | 47.619 | 0.00 | 0.00 | 0.00 | 6.13 |
6562 | 12386 | 2.223317 | ACGCCCGTAATAAATTTTCCGC | 60.223 | 45.455 | 0.00 | 0.00 | 0.00 | 5.54 |
6563 | 12387 | 3.678915 | ACGCCCGTAATAAATTTTCCG | 57.321 | 42.857 | 0.00 | 0.00 | 0.00 | 4.30 |
6564 | 12388 | 6.357766 | CGAAATACGCCCGTAATAAATTTTCC | 59.642 | 38.462 | 4.53 | 0.00 | 33.99 | 3.13 |
6565 | 12389 | 6.906678 | ACGAAATACGCCCGTAATAAATTTTC | 59.093 | 34.615 | 4.53 | 8.05 | 46.94 | 2.29 |
6566 | 12390 | 6.784176 | ACGAAATACGCCCGTAATAAATTTT | 58.216 | 32.000 | 4.53 | 0.27 | 46.94 | 1.82 |
6567 | 12391 | 6.362210 | ACGAAATACGCCCGTAATAAATTT | 57.638 | 33.333 | 4.53 | 0.00 | 46.94 | 1.82 |
6568 | 12392 | 5.989551 | ACGAAATACGCCCGTAATAAATT | 57.010 | 34.783 | 4.53 | 0.00 | 46.94 | 1.82 |
6569 | 12393 | 5.294060 | ACAACGAAATACGCCCGTAATAAAT | 59.706 | 36.000 | 4.53 | 0.00 | 46.94 | 1.40 |
6570 | 12394 | 4.629200 | ACAACGAAATACGCCCGTAATAAA | 59.371 | 37.500 | 4.53 | 0.00 | 46.94 | 1.40 |
6571 | 12395 | 4.180057 | ACAACGAAATACGCCCGTAATAA | 58.820 | 39.130 | 4.53 | 0.00 | 46.94 | 1.40 |
6572 | 12396 | 3.779759 | ACAACGAAATACGCCCGTAATA | 58.220 | 40.909 | 4.53 | 0.00 | 46.94 | 0.98 |
6573 | 12397 | 2.620242 | ACAACGAAATACGCCCGTAAT | 58.380 | 42.857 | 4.53 | 0.00 | 46.94 | 1.89 |
6574 | 12398 | 2.077413 | ACAACGAAATACGCCCGTAA | 57.923 | 45.000 | 4.53 | 0.00 | 46.94 | 3.18 |
6575 | 12399 | 2.163412 | ACTACAACGAAATACGCCCGTA | 59.837 | 45.455 | 2.78 | 2.78 | 46.94 | 4.02 |
6576 | 12400 | 1.067635 | ACTACAACGAAATACGCCCGT | 60.068 | 47.619 | 0.00 | 0.00 | 46.94 | 5.28 |
6577 | 12401 | 1.632422 | ACTACAACGAAATACGCCCG | 58.368 | 50.000 | 0.00 | 0.00 | 46.94 | 6.13 |
6578 | 12402 | 3.549070 | CACTACTACAACGAAATACGCCC | 59.451 | 47.826 | 0.00 | 0.00 | 46.94 | 6.13 |
6579 | 12403 | 4.414852 | TCACTACTACAACGAAATACGCC | 58.585 | 43.478 | 0.00 | 0.00 | 46.94 | 5.68 |
6580 | 12404 | 5.343058 | TGTTCACTACTACAACGAAATACGC | 59.657 | 40.000 | 0.00 | 0.00 | 46.94 | 4.42 |
6582 | 12406 | 7.864307 | ACTGTTCACTACTACAACGAAATAC | 57.136 | 36.000 | 0.00 | 0.00 | 0.00 | 1.89 |
6583 | 12407 | 9.398170 | GTTACTGTTCACTACTACAACGAAATA | 57.602 | 33.333 | 0.00 | 0.00 | 0.00 | 1.40 |
6584 | 12408 | 8.139989 | AGTTACTGTTCACTACTACAACGAAAT | 58.860 | 33.333 | 0.00 | 0.00 | 0.00 | 2.17 |
6585 | 12409 | 7.433131 | CAGTTACTGTTCACTACTACAACGAAA | 59.567 | 37.037 | 3.88 | 0.00 | 0.00 | 3.46 |
6586 | 12410 | 6.914215 | CAGTTACTGTTCACTACTACAACGAA | 59.086 | 38.462 | 3.88 | 0.00 | 0.00 | 3.85 |
6587 | 12411 | 6.432936 | CAGTTACTGTTCACTACTACAACGA | 58.567 | 40.000 | 3.88 | 0.00 | 0.00 | 3.85 |
6588 | 12412 | 6.670990 | CAGTTACTGTTCACTACTACAACG | 57.329 | 41.667 | 3.88 | 0.00 | 0.00 | 4.10 |
Based at the University of Bristol with support from BBSRC.
AutoCloner maintained by Alex Coulton.