Multiple sequence alignment - TraesCS2B01G338800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G338800 chr2B 100.000 2462 0 0 1 2462 483680723 483683184 0.000000e+00 4547
1 TraesCS2B01G338800 chr2B 75.821 335 73 6 448 778 483469788 483469458 1.960000e-36 163
2 TraesCS2B01G338800 chr2D 95.531 1790 45 18 343 2113 408361755 408363528 0.000000e+00 2830
3 TraesCS2B01G338800 chr2D 76.218 349 69 11 437 778 407982059 407981718 3.260000e-39 172
4 TraesCS2B01G338800 chr2D 98.734 79 1 0 269 347 408361639 408361717 9.180000e-30 141
5 TraesCS2B01G338800 chr2A 93.337 1786 72 23 342 2113 576357790 576359542 0.000000e+00 2595
6 TraesCS2B01G338800 chr2A 75.224 335 75 6 448 778 575694661 575694331 4.240000e-33 152
7 TraesCS2B01G338800 chr3B 93.603 297 18 1 2124 2420 386065593 386065298 2.250000e-120 442
8 TraesCS2B01G338800 chr3B 93.080 289 20 0 2130 2418 181465760 181465472 8.140000e-115 424
9 TraesCS2B01G338800 chr3B 92.478 226 16 1 47 271 41561032 41560807 3.050000e-84 322
10 TraesCS2B01G338800 chr3B 92.444 225 16 1 52 275 813188298 813188522 1.100000e-83 320
11 TraesCS2B01G338800 chr4B 93.127 291 20 0 2130 2420 28066558 28066268 6.290000e-116 427
12 TraesCS2B01G338800 chr4B 92.444 225 15 2 52 274 189677789 189677565 1.100000e-83 320
13 TraesCS2B01G338800 chr5A 92.069 290 23 0 2130 2419 504916680 504916391 2.280000e-110 409
14 TraesCS2B01G338800 chr5A 92.174 230 15 2 52 278 549412663 549412434 3.050000e-84 322
15 TraesCS2B01G338800 chr1D 91.333 300 25 1 2130 2428 436975326 436975625 2.280000e-110 409
16 TraesCS2B01G338800 chr1D 92.444 225 17 0 51 275 300022271 300022495 3.050000e-84 322
17 TraesCS2B01G338800 chr1D 93.151 219 14 1 52 270 46330818 46331035 1.100000e-83 320
18 TraesCS2B01G338800 chr7A 91.753 291 24 0 2130 2420 610211515 610211225 2.950000e-109 405
19 TraesCS2B01G338800 chr7B 91.438 292 24 1 2130 2421 74333297 74333587 1.370000e-107 399
20 TraesCS2B01G338800 chr7B 91.409 291 25 0 2130 2420 508815518 508815808 1.370000e-107 399
21 TraesCS2B01G338800 chr5D 91.096 292 26 0 2130 2421 49301175 49301466 1.770000e-106 396
22 TraesCS2B01G338800 chr1B 93.636 220 14 0 51 270 22663563 22663782 1.830000e-86 329
23 TraesCS2B01G338800 chr3D 93.151 219 15 0 52 270 108290843 108291061 3.050000e-84 322
24 TraesCS2B01G338800 chr6B 92.308 221 17 0 51 271 307574231 307574011 5.110000e-82 315


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G338800 chr2B 483680723 483683184 2461 False 4547.0 4547 100.0000 1 2462 1 chr2B.!!$F1 2461
1 TraesCS2B01G338800 chr2D 408361639 408363528 1889 False 1485.5 2830 97.1325 269 2113 2 chr2D.!!$F1 1844
2 TraesCS2B01G338800 chr2A 576357790 576359542 1752 False 2595.0 2595 93.3370 342 2113 1 chr2A.!!$F1 1771

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
957 1000 0.037303 CCTGGCAGGTGAACATGAGT 59.963 55.0 25.74 0.0 0.0 3.41 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2267 2331 0.031857 TTTGCACACAAATGAGCCGG 59.968 50.0 0.0 0.0 40.84 6.13 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
22 23 4.816392 AGGCGGATTAAATGTTTTTGGAC 58.184 39.130 0.00 0.00 0.00 4.02
23 24 4.282195 AGGCGGATTAAATGTTTTTGGACA 59.718 37.500 0.00 0.00 0.00 4.02
24 25 4.991687 GGCGGATTAAATGTTTTTGGACAA 59.008 37.500 0.00 0.00 32.47 3.18
25 26 5.120053 GGCGGATTAAATGTTTTTGGACAAG 59.880 40.000 0.00 0.00 32.47 3.16
26 27 5.120053 GCGGATTAAATGTTTTTGGACAAGG 59.880 40.000 0.00 0.00 32.47 3.61
27 28 5.637387 CGGATTAAATGTTTTTGGACAAGGG 59.363 40.000 0.00 0.00 32.47 3.95
28 29 6.517529 CGGATTAAATGTTTTTGGACAAGGGA 60.518 38.462 0.00 0.00 32.47 4.20
29 30 6.873605 GGATTAAATGTTTTTGGACAAGGGAG 59.126 38.462 0.00 0.00 32.47 4.30
30 31 3.751479 AATGTTTTTGGACAAGGGAGC 57.249 42.857 0.00 0.00 32.47 4.70
31 32 2.151502 TGTTTTTGGACAAGGGAGCA 57.848 45.000 0.00 0.00 0.00 4.26
32 33 2.676748 TGTTTTTGGACAAGGGAGCAT 58.323 42.857 0.00 0.00 0.00 3.79
33 34 2.627699 TGTTTTTGGACAAGGGAGCATC 59.372 45.455 0.00 0.00 0.00 3.91
34 35 1.533625 TTTTGGACAAGGGAGCATCG 58.466 50.000 0.00 0.00 34.37 3.84
46 47 3.861341 AGCATCGCTCAGGCTAAAA 57.139 47.368 0.00 0.00 35.82 1.52
47 48 1.661341 AGCATCGCTCAGGCTAAAAG 58.339 50.000 0.00 0.00 35.82 2.27
48 49 0.659957 GCATCGCTCAGGCTAAAAGG 59.340 55.000 0.00 0.00 36.09 3.11
49 50 2.014068 GCATCGCTCAGGCTAAAAGGT 61.014 52.381 0.00 0.00 36.09 3.50
50 51 2.359900 CATCGCTCAGGCTAAAAGGTT 58.640 47.619 0.00 0.00 36.09 3.50
51 52 2.561478 TCGCTCAGGCTAAAAGGTTT 57.439 45.000 0.00 0.00 36.09 3.27
52 53 3.688694 TCGCTCAGGCTAAAAGGTTTA 57.311 42.857 0.00 0.00 36.09 2.01
53 54 3.332034 TCGCTCAGGCTAAAAGGTTTAC 58.668 45.455 0.00 0.00 36.09 2.01
54 55 3.007614 TCGCTCAGGCTAAAAGGTTTACT 59.992 43.478 0.00 0.00 36.09 2.24
55 56 3.371285 CGCTCAGGCTAAAAGGTTTACTC 59.629 47.826 0.00 0.00 36.09 2.59
56 57 3.690139 GCTCAGGCTAAAAGGTTTACTCC 59.310 47.826 0.00 0.00 35.22 3.85
57 58 4.262617 CTCAGGCTAAAAGGTTTACTCCC 58.737 47.826 0.00 0.00 0.00 4.30
58 59 3.914435 TCAGGCTAAAAGGTTTACTCCCT 59.086 43.478 0.00 0.00 0.00 4.20
59 60 4.019591 TCAGGCTAAAAGGTTTACTCCCTC 60.020 45.833 0.00 0.00 0.00 4.30
60 61 3.266254 AGGCTAAAAGGTTTACTCCCTCC 59.734 47.826 0.00 0.00 0.00 4.30
61 62 3.268330 GCTAAAAGGTTTACTCCCTCCG 58.732 50.000 0.00 0.00 0.00 4.63
62 63 3.307269 GCTAAAAGGTTTACTCCCTCCGT 60.307 47.826 0.00 0.00 0.00 4.69
63 64 3.413846 AAAAGGTTTACTCCCTCCGTC 57.586 47.619 0.00 0.00 0.00 4.79
64 65 2.322339 AAGGTTTACTCCCTCCGTCT 57.678 50.000 0.00 0.00 0.00 4.18
65 66 1.849977 AGGTTTACTCCCTCCGTCTC 58.150 55.000 0.00 0.00 0.00 3.36
66 67 1.076677 AGGTTTACTCCCTCCGTCTCA 59.923 52.381 0.00 0.00 0.00 3.27
67 68 1.477295 GGTTTACTCCCTCCGTCTCAG 59.523 57.143 0.00 0.00 0.00 3.35
68 69 2.169330 GTTTACTCCCTCCGTCTCAGT 58.831 52.381 0.00 0.00 0.00 3.41
69 70 2.561858 GTTTACTCCCTCCGTCTCAGTT 59.438 50.000 0.00 0.00 0.00 3.16
70 71 2.599408 TACTCCCTCCGTCTCAGTTT 57.401 50.000 0.00 0.00 0.00 2.66
71 72 2.599408 ACTCCCTCCGTCTCAGTTTA 57.401 50.000 0.00 0.00 0.00 2.01
72 73 2.169330 ACTCCCTCCGTCTCAGTTTAC 58.831 52.381 0.00 0.00 0.00 2.01
73 74 2.168496 CTCCCTCCGTCTCAGTTTACA 58.832 52.381 0.00 0.00 0.00 2.41
74 75 2.561419 CTCCCTCCGTCTCAGTTTACAA 59.439 50.000 0.00 0.00 0.00 2.41
75 76 2.967201 TCCCTCCGTCTCAGTTTACAAA 59.033 45.455 0.00 0.00 0.00 2.83
76 77 3.581332 TCCCTCCGTCTCAGTTTACAAAT 59.419 43.478 0.00 0.00 0.00 2.32
77 78 3.933332 CCCTCCGTCTCAGTTTACAAATC 59.067 47.826 0.00 0.00 0.00 2.17
78 79 3.933332 CCTCCGTCTCAGTTTACAAATCC 59.067 47.826 0.00 0.00 0.00 3.01
79 80 4.322801 CCTCCGTCTCAGTTTACAAATCCT 60.323 45.833 0.00 0.00 0.00 3.24
80 81 5.105473 CCTCCGTCTCAGTTTACAAATCCTA 60.105 44.000 0.00 0.00 0.00 2.94
81 82 5.717119 TCCGTCTCAGTTTACAAATCCTAC 58.283 41.667 0.00 0.00 0.00 3.18
82 83 4.561606 CCGTCTCAGTTTACAAATCCTACG 59.438 45.833 0.00 0.00 0.00 3.51
83 84 5.159209 CGTCTCAGTTTACAAATCCTACGT 58.841 41.667 0.00 0.00 0.00 3.57
84 85 6.317088 CGTCTCAGTTTACAAATCCTACGTA 58.683 40.000 0.00 0.00 0.00 3.57
85 86 6.971184 CGTCTCAGTTTACAAATCCTACGTAT 59.029 38.462 0.00 0.00 0.00 3.06
86 87 8.124823 CGTCTCAGTTTACAAATCCTACGTATA 58.875 37.037 0.00 0.00 0.00 1.47
87 88 9.793252 GTCTCAGTTTACAAATCCTACGTATAA 57.207 33.333 0.00 0.00 0.00 0.98
97 98 9.760077 ACAAATCCTACGTATAAATCTAGGTTG 57.240 33.333 0.00 0.00 0.00 3.77
98 99 8.709646 CAAATCCTACGTATAAATCTAGGTTGC 58.290 37.037 0.00 0.00 0.00 4.17
99 100 6.336842 TCCTACGTATAAATCTAGGTTGCC 57.663 41.667 0.00 0.00 0.00 4.52
100 101 5.834742 TCCTACGTATAAATCTAGGTTGCCA 59.165 40.000 0.00 0.00 0.00 4.92
101 102 6.324512 TCCTACGTATAAATCTAGGTTGCCAA 59.675 38.462 0.00 0.00 0.00 4.52
102 103 7.015877 TCCTACGTATAAATCTAGGTTGCCAAT 59.984 37.037 0.00 0.00 0.00 3.16
103 104 7.660208 CCTACGTATAAATCTAGGTTGCCAATT 59.340 37.037 0.00 0.00 0.00 2.32
104 105 7.875327 ACGTATAAATCTAGGTTGCCAATTT 57.125 32.000 0.00 0.00 0.00 1.82
105 106 8.288689 ACGTATAAATCTAGGTTGCCAATTTT 57.711 30.769 0.00 0.00 0.00 1.82
106 107 9.398538 ACGTATAAATCTAGGTTGCCAATTTTA 57.601 29.630 0.00 0.00 0.00 1.52
110 111 4.893424 TCTAGGTTGCCAATTTTATCGC 57.107 40.909 0.00 0.00 0.00 4.58
111 112 2.959507 AGGTTGCCAATTTTATCGCC 57.040 45.000 0.00 0.00 0.00 5.54
112 113 1.480545 AGGTTGCCAATTTTATCGCCC 59.519 47.619 0.00 0.00 0.00 6.13
113 114 1.480545 GGTTGCCAATTTTATCGCCCT 59.519 47.619 0.00 0.00 0.00 5.19
114 115 2.691011 GGTTGCCAATTTTATCGCCCTA 59.309 45.455 0.00 0.00 0.00 3.53
115 116 3.131400 GGTTGCCAATTTTATCGCCCTAA 59.869 43.478 0.00 0.00 0.00 2.69
116 117 4.202212 GGTTGCCAATTTTATCGCCCTAAT 60.202 41.667 0.00 0.00 0.00 1.73
117 118 5.010213 GGTTGCCAATTTTATCGCCCTAATA 59.990 40.000 0.00 0.00 0.00 0.98
118 119 6.295067 GGTTGCCAATTTTATCGCCCTAATAT 60.295 38.462 0.00 0.00 0.00 1.28
119 120 7.094118 GGTTGCCAATTTTATCGCCCTAATATA 60.094 37.037 0.00 0.00 0.00 0.86
120 121 8.301002 GTTGCCAATTTTATCGCCCTAATATAA 58.699 33.333 0.00 0.00 0.00 0.98
121 122 8.410673 TGCCAATTTTATCGCCCTAATATAAA 57.589 30.769 0.00 0.00 0.00 1.40
122 123 8.301002 TGCCAATTTTATCGCCCTAATATAAAC 58.699 33.333 0.00 0.00 0.00 2.01
123 124 8.301002 GCCAATTTTATCGCCCTAATATAAACA 58.699 33.333 0.00 0.00 0.00 2.83
133 134 9.999660 TCGCCCTAATATAAACAATATAACACA 57.000 29.630 0.00 0.00 30.19 3.72
168 169 9.136323 ACCTTTTGAAAATAGAACATCTGAAGT 57.864 29.630 0.00 0.00 0.00 3.01
169 170 9.971922 CCTTTTGAAAATAGAACATCTGAAGTT 57.028 29.630 0.00 0.00 0.00 2.66
216 217 9.860650 AATATATAACTTGCATTAGGTTGGTCA 57.139 29.630 0.00 0.00 30.48 4.02
217 218 9.860650 ATATATAACTTGCATTAGGTTGGTCAA 57.139 29.630 0.00 0.00 30.48 3.18
218 219 6.909550 ATAACTTGCATTAGGTTGGTCAAA 57.090 33.333 0.00 0.00 30.48 2.69
219 220 5.806654 AACTTGCATTAGGTTGGTCAAAT 57.193 34.783 0.00 0.00 0.00 2.32
220 221 5.806654 ACTTGCATTAGGTTGGTCAAATT 57.193 34.783 0.00 0.00 0.00 1.82
221 222 5.540911 ACTTGCATTAGGTTGGTCAAATTG 58.459 37.500 0.00 0.00 0.00 2.32
222 223 5.304101 ACTTGCATTAGGTTGGTCAAATTGA 59.696 36.000 0.00 0.00 0.00 2.57
223 224 5.132897 TGCATTAGGTTGGTCAAATTGAC 57.867 39.130 17.16 17.16 46.23 3.18
236 237 6.585389 GTCAAATTGACGACTTAGGGATAC 57.415 41.667 10.58 0.00 37.67 2.24
237 238 5.231568 GTCAAATTGACGACTTAGGGATACG 59.768 44.000 10.58 0.00 37.67 3.06
238 239 2.857592 TTGACGACTTAGGGATACGC 57.142 50.000 0.00 0.00 37.60 4.42
239 240 0.659427 TGACGACTTAGGGATACGCG 59.341 55.000 3.53 3.53 37.60 6.01
240 241 0.659711 GACGACTTAGGGATACGCGC 60.660 60.000 5.73 0.00 37.60 6.86
241 242 1.357690 CGACTTAGGGATACGCGCA 59.642 57.895 5.73 0.00 37.60 6.09
242 243 0.933509 CGACTTAGGGATACGCGCAC 60.934 60.000 5.73 0.00 37.60 5.34
244 245 2.278989 TTAGGGATACGCGCACGC 60.279 61.111 5.73 4.64 45.53 5.34
245 246 3.778360 TTAGGGATACGCGCACGCC 62.778 63.158 5.73 2.11 45.53 5.68
250 251 3.761445 GATACGCGCACGCCCTGTA 62.761 63.158 5.73 6.59 45.53 2.74
251 252 3.359515 ATACGCGCACGCCCTGTAA 62.360 57.895 5.73 0.00 45.53 2.41
252 253 2.839043 ATACGCGCACGCCCTGTAAA 62.839 55.000 5.73 0.00 45.53 2.01
253 254 4.439472 CGCGCACGCCCTGTAAAC 62.439 66.667 8.75 0.00 37.98 2.01
254 255 3.047877 GCGCACGCCCTGTAAACT 61.048 61.111 0.30 0.00 34.56 2.66
255 256 2.860293 CGCACGCCCTGTAAACTG 59.140 61.111 0.00 0.00 0.00 3.16
256 257 1.666553 CGCACGCCCTGTAAACTGA 60.667 57.895 0.00 0.00 0.00 3.41
257 258 1.225376 CGCACGCCCTGTAAACTGAA 61.225 55.000 0.00 0.00 0.00 3.02
258 259 0.948678 GCACGCCCTGTAAACTGAAA 59.051 50.000 0.00 0.00 0.00 2.69
259 260 1.069227 GCACGCCCTGTAAACTGAAAG 60.069 52.381 0.00 0.00 42.29 2.62
260 261 2.489971 CACGCCCTGTAAACTGAAAGA 58.510 47.619 0.00 0.00 37.43 2.52
261 262 2.480419 CACGCCCTGTAAACTGAAAGAG 59.520 50.000 0.00 0.00 37.43 2.85
262 263 2.367567 ACGCCCTGTAAACTGAAAGAGA 59.632 45.455 0.00 0.00 37.43 3.10
263 264 2.996621 CGCCCTGTAAACTGAAAGAGAG 59.003 50.000 0.00 0.00 37.43 3.20
264 265 3.339141 GCCCTGTAAACTGAAAGAGAGG 58.661 50.000 0.00 0.00 37.43 3.69
265 266 3.870299 GCCCTGTAAACTGAAAGAGAGGG 60.870 52.174 0.00 0.00 41.74 4.30
266 267 3.583086 CCCTGTAAACTGAAAGAGAGGGA 59.417 47.826 0.00 0.00 41.40 4.20
267 268 4.323104 CCCTGTAAACTGAAAGAGAGGGAG 60.323 50.000 0.00 0.00 41.40 4.30
279 280 8.792830 TGAAAGAGAGGGAGTATATTTTTGTG 57.207 34.615 0.00 0.00 0.00 3.33
371 414 3.577667 CATCACACAATGCGAAACCAAT 58.422 40.909 0.00 0.00 0.00 3.16
756 799 1.579932 GGAGAAGACGCACGTGAGA 59.420 57.895 26.44 0.00 0.00 3.27
850 893 2.844451 GCCACCTGCAAGCAAACGA 61.844 57.895 0.00 0.00 40.77 3.85
858 901 1.285578 GCAAGCAAACGAAAAGCCAA 58.714 45.000 0.00 0.00 0.00 4.52
859 902 1.258720 GCAAGCAAACGAAAAGCCAAG 59.741 47.619 0.00 0.00 0.00 3.61
860 903 1.860326 CAAGCAAACGAAAAGCCAAGG 59.140 47.619 0.00 0.00 0.00 3.61
861 904 0.249447 AGCAAACGAAAAGCCAAGGC 60.249 50.000 2.02 2.02 42.33 4.35
862 905 1.221466 GCAAACGAAAAGCCAAGGCC 61.221 55.000 7.62 0.00 43.17 5.19
864 907 2.693250 AAACGAAAAGCCAAGGCCGC 62.693 55.000 7.62 0.00 43.17 6.53
865 908 4.759096 CGAAAAGCCAAGGCCGCG 62.759 66.667 7.62 0.00 43.17 6.46
881 924 3.541831 CGCGCGCGTCATTAGTGT 61.542 61.111 42.49 0.00 34.35 3.55
883 926 2.608204 CGCGCGTCATTAGTGTCG 59.392 61.111 24.19 0.74 39.38 4.35
888 931 2.736890 CGTCATTAGTGTCGCTGCA 58.263 52.632 0.00 0.00 30.84 4.41
889 932 1.067693 CGTCATTAGTGTCGCTGCAA 58.932 50.000 0.00 0.00 30.84 4.08
890 933 1.660607 CGTCATTAGTGTCGCTGCAAT 59.339 47.619 0.00 0.00 30.84 3.56
891 934 2.535534 CGTCATTAGTGTCGCTGCAATG 60.536 50.000 0.00 1.12 30.84 2.82
892 935 1.398041 TCATTAGTGTCGCTGCAATGC 59.602 47.619 0.00 0.00 0.00 3.56
894 937 1.452110 TTAGTGTCGCTGCAATGCAT 58.548 45.000 8.91 0.00 38.13 3.96
895 938 2.307934 TAGTGTCGCTGCAATGCATA 57.692 45.000 8.91 0.00 38.13 3.14
896 939 0.729116 AGTGTCGCTGCAATGCATAC 59.271 50.000 8.91 8.39 38.13 2.39
897 940 0.587242 GTGTCGCTGCAATGCATACG 60.587 55.000 20.16 20.16 38.13 3.06
898 941 1.652329 GTCGCTGCAATGCATACGC 60.652 57.895 21.02 14.98 38.13 4.42
899 942 2.352686 CGCTGCAATGCATACGCC 60.353 61.111 8.91 3.65 38.13 5.68
900 943 2.352686 GCTGCAATGCATACGCCG 60.353 61.111 8.91 11.88 38.13 6.46
901 944 2.328989 CTGCAATGCATACGCCGG 59.671 61.111 8.91 0.00 38.13 6.13
902 945 2.124942 TGCAATGCATACGCCGGA 60.125 55.556 5.05 0.00 37.32 5.14
903 946 1.713937 CTGCAATGCATACGCCGGAA 61.714 55.000 8.91 0.00 38.13 4.30
904 947 1.100463 TGCAATGCATACGCCGGAAT 61.100 50.000 5.05 0.00 37.32 3.01
905 948 0.871722 GCAATGCATACGCCGGAATA 59.128 50.000 5.05 0.00 37.32 1.75
906 949 1.468520 GCAATGCATACGCCGGAATAT 59.531 47.619 5.05 0.00 37.32 1.28
907 950 2.675844 GCAATGCATACGCCGGAATATA 59.324 45.455 5.05 0.00 37.32 0.86
908 951 3.312421 GCAATGCATACGCCGGAATATAT 59.688 43.478 5.05 0.00 37.32 0.86
909 952 4.509970 GCAATGCATACGCCGGAATATATA 59.490 41.667 5.05 0.00 37.32 0.86
910 953 5.558273 GCAATGCATACGCCGGAATATATAC 60.558 44.000 5.05 0.00 37.32 1.47
957 1000 0.037303 CCTGGCAGGTGAACATGAGT 59.963 55.000 25.74 0.00 0.00 3.41
1925 1969 5.242434 ACGTTAGTGCCATGAACAAGATTA 58.758 37.500 0.00 0.00 0.00 1.75
1927 1971 6.128282 ACGTTAGTGCCATGAACAAGATTAAG 60.128 38.462 0.00 0.00 0.00 1.85
1930 1974 6.259550 AGTGCCATGAACAAGATTAAGTTC 57.740 37.500 0.00 0.00 43.31 3.01
1956 2003 9.519905 CAAGTGAAGAAAAATAAATCATTTGCG 57.480 29.630 0.00 0.00 36.93 4.85
1965 2012 9.705290 AAAAATAAATCATTTGCGGAGTTAGTT 57.295 25.926 0.00 0.00 35.50 2.24
1971 2019 8.500753 AATCATTTGCGGAGTTAGTTGTATAA 57.499 30.769 0.00 0.00 0.00 0.98
2113 2177 7.711339 ACCAAATTAGTCAGATAACCGATTCTC 59.289 37.037 0.00 0.00 0.00 2.87
2114 2178 7.710907 CCAAATTAGTCAGATAACCGATTCTCA 59.289 37.037 0.00 0.00 0.00 3.27
2115 2179 8.759641 CAAATTAGTCAGATAACCGATTCTCAG 58.240 37.037 0.00 0.00 0.00 3.35
2116 2180 7.589958 ATTAGTCAGATAACCGATTCTCAGT 57.410 36.000 0.00 0.00 0.00 3.41
2117 2181 5.255710 AGTCAGATAACCGATTCTCAGTG 57.744 43.478 0.00 0.00 0.00 3.66
2118 2182 4.098654 AGTCAGATAACCGATTCTCAGTGG 59.901 45.833 0.00 0.00 0.00 4.00
2119 2183 4.098044 GTCAGATAACCGATTCTCAGTGGA 59.902 45.833 0.00 0.00 0.00 4.02
2120 2184 4.895889 TCAGATAACCGATTCTCAGTGGAT 59.104 41.667 0.00 0.00 0.00 3.41
2121 2185 5.363868 TCAGATAACCGATTCTCAGTGGATT 59.636 40.000 0.00 0.00 0.00 3.01
2122 2186 5.694006 CAGATAACCGATTCTCAGTGGATTC 59.306 44.000 0.00 0.00 0.00 2.52
2123 2187 5.600484 AGATAACCGATTCTCAGTGGATTCT 59.400 40.000 0.00 0.00 0.00 2.40
2124 2188 3.810310 ACCGATTCTCAGTGGATTCTC 57.190 47.619 0.00 0.00 0.00 2.87
2125 2189 2.099921 ACCGATTCTCAGTGGATTCTCG 59.900 50.000 0.00 0.00 0.00 4.04
2126 2190 2.123342 CGATTCTCAGTGGATTCTCGC 58.877 52.381 0.00 0.00 0.00 5.03
2127 2191 2.480244 CGATTCTCAGTGGATTCTCGCA 60.480 50.000 0.00 0.00 0.00 5.10
2128 2192 2.370281 TTCTCAGTGGATTCTCGCAC 57.630 50.000 0.00 0.00 0.00 5.34
2129 2193 1.550327 TCTCAGTGGATTCTCGCACT 58.450 50.000 0.00 0.00 31.26 4.40
2130 2194 1.203287 TCTCAGTGGATTCTCGCACTG 59.797 52.381 11.09 11.09 42.12 3.66
2131 2195 0.390340 TCAGTGGATTCTCGCACTGC 60.390 55.000 12.15 0.00 41.34 4.40
2132 2196 0.390866 CAGTGGATTCTCGCACTGCT 60.391 55.000 0.00 0.00 38.15 4.24
2133 2197 0.322975 AGTGGATTCTCGCACTGCTT 59.677 50.000 0.00 0.00 30.44 3.91
2134 2198 1.550524 AGTGGATTCTCGCACTGCTTA 59.449 47.619 0.00 0.00 30.44 3.09
2135 2199 1.929836 GTGGATTCTCGCACTGCTTAG 59.070 52.381 0.00 0.00 0.00 2.18
2136 2200 1.824852 TGGATTCTCGCACTGCTTAGA 59.175 47.619 0.00 0.00 0.00 2.10
2137 2201 2.159184 TGGATTCTCGCACTGCTTAGAG 60.159 50.000 0.00 0.00 0.00 2.43
2138 2202 2.159170 GGATTCTCGCACTGCTTAGAGT 60.159 50.000 0.00 0.00 32.90 3.24
2139 2203 3.516615 GATTCTCGCACTGCTTAGAGTT 58.483 45.455 0.00 0.00 32.90 3.01
2140 2204 2.354109 TCTCGCACTGCTTAGAGTTG 57.646 50.000 0.00 0.00 32.90 3.16
2141 2205 1.067565 TCTCGCACTGCTTAGAGTTGG 60.068 52.381 0.00 0.00 32.90 3.77
2142 2206 0.679505 TCGCACTGCTTAGAGTTGGT 59.320 50.000 0.00 0.00 0.00 3.67
2143 2207 0.792640 CGCACTGCTTAGAGTTGGTG 59.207 55.000 0.00 0.00 0.00 4.17
2144 2208 1.605457 CGCACTGCTTAGAGTTGGTGA 60.605 52.381 0.00 0.00 0.00 4.02
2145 2209 1.801178 GCACTGCTTAGAGTTGGTGAC 59.199 52.381 0.00 0.00 0.00 3.67
2146 2210 2.806745 GCACTGCTTAGAGTTGGTGACA 60.807 50.000 0.00 0.00 39.83 3.58
2147 2211 2.802816 CACTGCTTAGAGTTGGTGACAC 59.197 50.000 0.00 0.00 42.67 3.67
2148 2212 2.700897 ACTGCTTAGAGTTGGTGACACT 59.299 45.455 5.39 0.00 42.67 3.55
2149 2213 3.243907 ACTGCTTAGAGTTGGTGACACTC 60.244 47.826 5.39 0.00 42.67 3.51
2150 2214 2.965831 TGCTTAGAGTTGGTGACACTCT 59.034 45.455 10.01 10.01 44.97 3.24
2151 2215 3.243873 TGCTTAGAGTTGGTGACACTCTG 60.244 47.826 13.88 2.15 43.72 3.35
2152 2216 3.862642 GCTTAGAGTTGGTGACACTCTGG 60.863 52.174 13.88 8.75 43.72 3.86
2153 2217 2.088104 AGAGTTGGTGACACTCTGGA 57.912 50.000 5.39 0.00 42.93 3.86
2154 2218 1.689273 AGAGTTGGTGACACTCTGGAC 59.311 52.381 5.39 0.00 42.93 4.02
2155 2219 0.759346 AGTTGGTGACACTCTGGACC 59.241 55.000 5.39 0.00 42.67 4.46
2156 2220 0.468226 GTTGGTGACACTCTGGACCA 59.532 55.000 5.39 0.00 42.67 4.02
2157 2221 0.468226 TTGGTGACACTCTGGACCAC 59.532 55.000 5.39 0.00 42.67 4.16
2158 2222 0.398522 TGGTGACACTCTGGACCACT 60.399 55.000 5.39 0.00 31.54 4.00
2159 2223 0.318762 GGTGACACTCTGGACCACTC 59.681 60.000 5.39 0.00 0.00 3.51
2160 2224 1.040646 GTGACACTCTGGACCACTCA 58.959 55.000 0.00 0.00 0.00 3.41
2161 2225 1.620819 GTGACACTCTGGACCACTCAT 59.379 52.381 0.00 0.00 0.00 2.90
2162 2226 1.895798 TGACACTCTGGACCACTCATC 59.104 52.381 0.00 0.00 0.00 2.92
2163 2227 1.895798 GACACTCTGGACCACTCATCA 59.104 52.381 0.00 0.00 0.00 3.07
2164 2228 2.499289 GACACTCTGGACCACTCATCAT 59.501 50.000 0.00 0.00 0.00 2.45
2165 2229 3.701542 GACACTCTGGACCACTCATCATA 59.298 47.826 0.00 0.00 0.00 2.15
2166 2230 4.096681 ACACTCTGGACCACTCATCATAA 58.903 43.478 0.00 0.00 0.00 1.90
2167 2231 4.718774 ACACTCTGGACCACTCATCATAAT 59.281 41.667 0.00 0.00 0.00 1.28
2168 2232 5.190528 ACACTCTGGACCACTCATCATAATT 59.809 40.000 0.00 0.00 0.00 1.40
2169 2233 5.757320 CACTCTGGACCACTCATCATAATTC 59.243 44.000 0.00 0.00 0.00 2.17
2170 2234 5.664908 ACTCTGGACCACTCATCATAATTCT 59.335 40.000 0.00 0.00 0.00 2.40
2171 2235 6.166984 TCTGGACCACTCATCATAATTCTC 57.833 41.667 0.00 0.00 0.00 2.87
2172 2236 4.948847 TGGACCACTCATCATAATTCTCG 58.051 43.478 0.00 0.00 0.00 4.04
2173 2237 4.405680 TGGACCACTCATCATAATTCTCGT 59.594 41.667 0.00 0.00 0.00 4.18
2174 2238 5.104941 TGGACCACTCATCATAATTCTCGTT 60.105 40.000 0.00 0.00 0.00 3.85
2175 2239 5.817816 GGACCACTCATCATAATTCTCGTTT 59.182 40.000 0.00 0.00 0.00 3.60
2176 2240 6.238211 GGACCACTCATCATAATTCTCGTTTG 60.238 42.308 0.00 0.00 0.00 2.93
2177 2241 6.406370 ACCACTCATCATAATTCTCGTTTGA 58.594 36.000 0.00 0.00 0.00 2.69
2178 2242 7.050377 ACCACTCATCATAATTCTCGTTTGAT 58.950 34.615 0.00 0.00 0.00 2.57
2179 2243 7.554118 ACCACTCATCATAATTCTCGTTTGATT 59.446 33.333 0.00 0.00 0.00 2.57
2180 2244 7.854422 CCACTCATCATAATTCTCGTTTGATTG 59.146 37.037 0.00 0.00 0.00 2.67
2181 2245 8.393366 CACTCATCATAATTCTCGTTTGATTGT 58.607 33.333 0.00 0.00 0.00 2.71
2182 2246 9.599866 ACTCATCATAATTCTCGTTTGATTGTA 57.400 29.630 0.00 0.00 0.00 2.41
2184 2248 8.551205 TCATCATAATTCTCGTTTGATTGTAGC 58.449 33.333 0.00 0.00 0.00 3.58
2185 2249 8.554528 CATCATAATTCTCGTTTGATTGTAGCT 58.445 33.333 0.00 0.00 0.00 3.32
2186 2250 8.131455 TCATAATTCTCGTTTGATTGTAGCTC 57.869 34.615 0.00 0.00 0.00 4.09
2187 2251 5.803020 AATTCTCGTTTGATTGTAGCTCC 57.197 39.130 0.00 0.00 0.00 4.70
2188 2252 4.537135 TTCTCGTTTGATTGTAGCTCCT 57.463 40.909 0.00 0.00 0.00 3.69
2189 2253 4.537135 TCTCGTTTGATTGTAGCTCCTT 57.463 40.909 0.00 0.00 0.00 3.36
2190 2254 4.894784 TCTCGTTTGATTGTAGCTCCTTT 58.105 39.130 0.00 0.00 0.00 3.11
2191 2255 6.032956 TCTCGTTTGATTGTAGCTCCTTTA 57.967 37.500 0.00 0.00 0.00 1.85
2192 2256 5.867716 TCTCGTTTGATTGTAGCTCCTTTAC 59.132 40.000 0.00 0.00 0.00 2.01
2193 2257 5.790593 TCGTTTGATTGTAGCTCCTTTACT 58.209 37.500 0.00 0.00 0.00 2.24
2194 2258 6.228258 TCGTTTGATTGTAGCTCCTTTACTT 58.772 36.000 0.00 0.00 0.00 2.24
2195 2259 6.708949 TCGTTTGATTGTAGCTCCTTTACTTT 59.291 34.615 0.00 0.00 0.00 2.66
2196 2260 7.227910 TCGTTTGATTGTAGCTCCTTTACTTTT 59.772 33.333 0.00 0.00 0.00 2.27
2197 2261 8.500773 CGTTTGATTGTAGCTCCTTTACTTTTA 58.499 33.333 0.00 0.00 0.00 1.52
2201 2265 9.787435 TGATTGTAGCTCCTTTACTTTTAAAGA 57.213 29.630 12.02 0.00 44.99 2.52
2205 2269 9.010029 TGTAGCTCCTTTACTTTTAAAGATTGG 57.990 33.333 12.02 7.81 44.99 3.16
2206 2270 9.227777 GTAGCTCCTTTACTTTTAAAGATTGGA 57.772 33.333 12.02 11.15 44.99 3.53
2207 2271 8.341892 AGCTCCTTTACTTTTAAAGATTGGAG 57.658 34.615 22.25 22.25 44.99 3.86
2208 2272 8.164070 AGCTCCTTTACTTTTAAAGATTGGAGA 58.836 33.333 26.39 12.50 44.99 3.71
2209 2273 8.454894 GCTCCTTTACTTTTAAAGATTGGAGAG 58.545 37.037 26.39 18.52 44.99 3.20
2210 2274 8.336801 TCCTTTACTTTTAAAGATTGGAGAGC 57.663 34.615 12.02 0.00 44.99 4.09
2211 2275 8.164070 TCCTTTACTTTTAAAGATTGGAGAGCT 58.836 33.333 12.02 0.00 44.99 4.09
2212 2276 8.797438 CCTTTACTTTTAAAGATTGGAGAGCTT 58.203 33.333 12.02 0.00 44.99 3.74
2216 2280 8.329203 ACTTTTAAAGATTGGAGAGCTTAGTG 57.671 34.615 12.02 0.00 31.52 2.74
2217 2281 7.939588 ACTTTTAAAGATTGGAGAGCTTAGTGT 59.060 33.333 12.02 0.00 31.52 3.55
2218 2282 8.691661 TTTTAAAGATTGGAGAGCTTAGTGTT 57.308 30.769 0.00 0.00 31.52 3.32
2219 2283 7.907214 TTAAAGATTGGAGAGCTTAGTGTTC 57.093 36.000 0.00 0.00 31.52 3.18
2220 2284 5.489792 AAGATTGGAGAGCTTAGTGTTCA 57.510 39.130 0.00 0.00 30.81 3.18
2221 2285 5.489792 AGATTGGAGAGCTTAGTGTTCAA 57.510 39.130 0.00 0.00 0.00 2.69
2222 2286 6.059787 AGATTGGAGAGCTTAGTGTTCAAT 57.940 37.500 0.00 0.00 0.00 2.57
2223 2287 6.479884 AGATTGGAGAGCTTAGTGTTCAATT 58.520 36.000 0.00 0.00 0.00 2.32
2224 2288 6.944862 AGATTGGAGAGCTTAGTGTTCAATTT 59.055 34.615 0.00 0.00 0.00 1.82
2225 2289 6.959639 TTGGAGAGCTTAGTGTTCAATTTT 57.040 33.333 0.00 0.00 0.00 1.82
2226 2290 6.560253 TGGAGAGCTTAGTGTTCAATTTTC 57.440 37.500 0.00 0.00 0.00 2.29
2227 2291 5.473504 TGGAGAGCTTAGTGTTCAATTTTCC 59.526 40.000 0.00 0.00 0.00 3.13
2228 2292 5.707764 GGAGAGCTTAGTGTTCAATTTTCCT 59.292 40.000 0.00 0.00 0.00 3.36
2229 2293 6.128145 GGAGAGCTTAGTGTTCAATTTTCCTC 60.128 42.308 0.00 0.00 0.00 3.71
2230 2294 6.538263 AGAGCTTAGTGTTCAATTTTCCTCT 58.462 36.000 0.00 0.00 0.00 3.69
2231 2295 7.001073 AGAGCTTAGTGTTCAATTTTCCTCTT 58.999 34.615 0.00 0.00 0.00 2.85
2232 2296 7.503902 AGAGCTTAGTGTTCAATTTTCCTCTTT 59.496 33.333 0.00 0.00 0.00 2.52
2233 2297 8.011844 AGCTTAGTGTTCAATTTTCCTCTTTT 57.988 30.769 0.00 0.00 0.00 2.27
2234 2298 7.922811 AGCTTAGTGTTCAATTTTCCTCTTTTG 59.077 33.333 0.00 0.00 0.00 2.44
2235 2299 7.706607 GCTTAGTGTTCAATTTTCCTCTTTTGT 59.293 33.333 0.00 0.00 0.00 2.83
2236 2300 9.586435 CTTAGTGTTCAATTTTCCTCTTTTGTT 57.414 29.630 0.00 0.00 0.00 2.83
2251 2315 9.959749 TCCTCTTTTGTTATTCAACATGTAAAC 57.040 29.630 0.00 0.16 44.01 2.01
2252 2316 9.743057 CCTCTTTTGTTATTCAACATGTAAACA 57.257 29.630 0.00 2.86 44.01 2.83
2254 2318 9.743057 TCTTTTGTTATTCAACATGTAAACAGG 57.257 29.630 0.00 0.00 44.01 4.00
2255 2319 9.528018 CTTTTGTTATTCAACATGTAAACAGGT 57.472 29.630 0.00 0.00 44.01 4.00
2256 2320 9.522804 TTTTGTTATTCAACATGTAAACAGGTC 57.477 29.630 0.00 0.00 44.01 3.85
2257 2321 7.809546 TGTTATTCAACATGTAAACAGGTCA 57.190 32.000 0.00 0.00 40.26 4.02
2258 2322 7.870826 TGTTATTCAACATGTAAACAGGTCAG 58.129 34.615 0.00 0.00 40.26 3.51
2259 2323 4.829064 TTCAACATGTAAACAGGTCAGC 57.171 40.909 0.00 0.00 40.26 4.26
2260 2324 4.085357 TCAACATGTAAACAGGTCAGCT 57.915 40.909 0.00 0.00 40.26 4.24
2261 2325 5.222079 TCAACATGTAAACAGGTCAGCTA 57.778 39.130 0.00 0.00 40.26 3.32
2262 2326 5.616270 TCAACATGTAAACAGGTCAGCTAA 58.384 37.500 0.00 0.00 40.26 3.09
2263 2327 6.237901 TCAACATGTAAACAGGTCAGCTAAT 58.762 36.000 0.00 0.00 40.26 1.73
2264 2328 6.371548 TCAACATGTAAACAGGTCAGCTAATC 59.628 38.462 0.00 0.00 40.26 1.75
2265 2329 6.054860 ACATGTAAACAGGTCAGCTAATCT 57.945 37.500 0.00 0.00 35.87 2.40
2266 2330 6.109359 ACATGTAAACAGGTCAGCTAATCTC 58.891 40.000 0.00 0.00 35.87 2.75
2267 2331 5.086104 TGTAAACAGGTCAGCTAATCTCC 57.914 43.478 0.00 0.00 0.00 3.71
2268 2332 3.636153 AAACAGGTCAGCTAATCTCCC 57.364 47.619 0.00 0.00 0.00 4.30
2269 2333 1.115467 ACAGGTCAGCTAATCTCCCG 58.885 55.000 0.00 0.00 0.00 5.14
2270 2334 0.390860 CAGGTCAGCTAATCTCCCGG 59.609 60.000 0.00 0.00 0.00 5.73
2271 2335 1.069935 GGTCAGCTAATCTCCCGGC 59.930 63.158 0.00 0.00 0.00 6.13
2272 2336 1.403687 GGTCAGCTAATCTCCCGGCT 61.404 60.000 0.00 0.00 35.23 5.52
2273 2337 0.032815 GTCAGCTAATCTCCCGGCTC 59.967 60.000 0.00 0.00 32.30 4.70
2274 2338 0.397114 TCAGCTAATCTCCCGGCTCA 60.397 55.000 0.00 0.00 32.30 4.26
2275 2339 0.683973 CAGCTAATCTCCCGGCTCAT 59.316 55.000 0.00 0.00 32.30 2.90
2276 2340 1.071385 CAGCTAATCTCCCGGCTCATT 59.929 52.381 0.00 0.00 32.30 2.57
2277 2341 1.771255 AGCTAATCTCCCGGCTCATTT 59.229 47.619 0.00 0.00 0.00 2.32
2278 2342 1.876156 GCTAATCTCCCGGCTCATTTG 59.124 52.381 0.00 0.00 0.00 2.32
2279 2343 2.746472 GCTAATCTCCCGGCTCATTTGT 60.746 50.000 0.00 0.00 0.00 2.83
2280 2344 1.755179 AATCTCCCGGCTCATTTGTG 58.245 50.000 0.00 0.00 0.00 3.33
2281 2345 0.620556 ATCTCCCGGCTCATTTGTGT 59.379 50.000 0.00 0.00 0.00 3.72
2282 2346 0.321564 TCTCCCGGCTCATTTGTGTG 60.322 55.000 0.00 0.00 0.00 3.82
2283 2347 1.926511 CTCCCGGCTCATTTGTGTGC 61.927 60.000 0.00 0.00 0.00 4.57
2284 2348 2.267351 CCCGGCTCATTTGTGTGCA 61.267 57.895 0.00 0.00 0.00 4.57
2285 2349 1.659233 CCGGCTCATTTGTGTGCAA 59.341 52.632 0.00 0.00 0.00 4.08
2287 2351 1.411394 CGGCTCATTTGTGTGCAAAG 58.589 50.000 0.00 0.00 46.30 2.77
2288 2352 1.142474 GGCTCATTTGTGTGCAAAGC 58.858 50.000 0.00 0.00 46.30 3.51
2289 2353 0.780002 GCTCATTTGTGTGCAAAGCG 59.220 50.000 0.00 0.00 46.30 4.68
2290 2354 1.865248 GCTCATTTGTGTGCAAAGCGT 60.865 47.619 0.00 0.00 46.30 5.07
2291 2355 1.782569 CTCATTTGTGTGCAAAGCGTG 59.217 47.619 0.00 0.00 46.30 5.34
2300 2364 3.604400 CAAAGCGTGCTTGCACAC 58.396 55.556 22.97 14.90 36.26 3.82
2301 2365 1.064621 CAAAGCGTGCTTGCACACT 59.935 52.632 22.97 16.82 38.45 3.55
2302 2366 0.526096 CAAAGCGTGCTTGCACACTT 60.526 50.000 22.97 21.09 38.45 3.16
2303 2367 1.021202 AAAGCGTGCTTGCACACTTA 58.979 45.000 23.43 0.00 38.45 2.24
2304 2368 1.021202 AAGCGTGCTTGCACACTTAA 58.979 45.000 22.34 0.00 38.45 1.85
2305 2369 1.238439 AGCGTGCTTGCACACTTAAT 58.762 45.000 22.97 0.00 38.45 1.40
2306 2370 1.069022 AGCGTGCTTGCACACTTAATG 60.069 47.619 22.97 8.06 38.45 1.90
2307 2371 1.334960 GCGTGCTTGCACACTTAATGT 60.335 47.619 22.97 0.00 44.81 2.71
2321 2385 4.189231 ACTTAATGTGACCGATAGTTGGC 58.811 43.478 0.00 0.00 0.00 4.52
2322 2386 4.081087 ACTTAATGTGACCGATAGTTGGCT 60.081 41.667 0.00 0.00 0.00 4.75
2323 2387 3.350219 AATGTGACCGATAGTTGGCTT 57.650 42.857 0.00 0.00 0.00 4.35
2324 2388 2.093306 TGTGACCGATAGTTGGCTTG 57.907 50.000 0.00 0.00 0.00 4.01
2325 2389 1.621317 TGTGACCGATAGTTGGCTTGA 59.379 47.619 0.00 0.00 0.00 3.02
2326 2390 2.000447 GTGACCGATAGTTGGCTTGAC 59.000 52.381 0.00 0.00 0.00 3.18
2327 2391 1.621317 TGACCGATAGTTGGCTTGACA 59.379 47.619 0.00 0.00 0.00 3.58
2328 2392 2.037902 TGACCGATAGTTGGCTTGACAA 59.962 45.455 0.00 0.00 0.00 3.18
2329 2393 2.673368 GACCGATAGTTGGCTTGACAAG 59.327 50.000 11.02 11.02 0.00 3.16
2330 2394 2.301870 ACCGATAGTTGGCTTGACAAGA 59.698 45.455 19.51 0.00 0.00 3.02
2331 2395 2.673368 CCGATAGTTGGCTTGACAAGAC 59.327 50.000 19.51 17.09 36.92 3.01
2332 2396 2.673368 CGATAGTTGGCTTGACAAGACC 59.327 50.000 18.52 17.63 34.86 3.85
2333 2397 2.561478 TAGTTGGCTTGACAAGACCC 57.439 50.000 18.52 11.24 34.86 4.46
2334 2398 0.178990 AGTTGGCTTGACAAGACCCC 60.179 55.000 18.52 10.54 34.86 4.95
2335 2399 0.178990 GTTGGCTTGACAAGACCCCT 60.179 55.000 18.52 0.00 34.86 4.79
2336 2400 0.178992 TTGGCTTGACAAGACCCCTG 60.179 55.000 18.52 0.00 34.86 4.45
2337 2401 1.303643 GGCTTGACAAGACCCCTGG 60.304 63.158 19.51 0.00 0.00 4.45
2338 2402 1.973812 GCTTGACAAGACCCCTGGC 60.974 63.158 19.51 0.00 0.00 4.85
2339 2403 1.763770 CTTGACAAGACCCCTGGCT 59.236 57.895 9.76 0.00 0.00 4.75
2340 2404 0.111253 CTTGACAAGACCCCTGGCTT 59.889 55.000 9.76 0.00 0.00 4.35
2341 2405 0.110486 TTGACAAGACCCCTGGCTTC 59.890 55.000 0.00 0.00 0.00 3.86
2342 2406 0.768221 TGACAAGACCCCTGGCTTCT 60.768 55.000 0.00 0.00 0.00 2.85
2343 2407 0.402121 GACAAGACCCCTGGCTTCTT 59.598 55.000 2.97 2.97 0.00 2.52
2344 2408 0.111253 ACAAGACCCCTGGCTTCTTG 59.889 55.000 23.60 23.60 42.26 3.02
2345 2409 0.610232 CAAGACCCCTGGCTTCTTGG 60.610 60.000 20.08 5.51 35.48 3.61
2346 2410 1.068352 AAGACCCCTGGCTTCTTGGT 61.068 55.000 7.11 0.00 0.00 3.67
2347 2411 1.303643 GACCCCTGGCTTCTTGGTG 60.304 63.158 0.00 0.00 0.00 4.17
2348 2412 2.069165 GACCCCTGGCTTCTTGGTGT 62.069 60.000 0.00 0.00 0.00 4.16
2349 2413 1.303643 CCCCTGGCTTCTTGGTGTC 60.304 63.158 0.00 0.00 0.00 3.67
2350 2414 1.303643 CCCTGGCTTCTTGGTGTCC 60.304 63.158 0.00 0.00 0.00 4.02
2351 2415 1.455849 CCTGGCTTCTTGGTGTCCA 59.544 57.895 0.00 0.00 0.00 4.02
2352 2416 0.607489 CCTGGCTTCTTGGTGTCCAG 60.607 60.000 0.00 0.00 42.87 3.86
2353 2417 1.228245 TGGCTTCTTGGTGTCCAGC 60.228 57.895 0.00 0.00 33.81 4.85
2354 2418 1.973812 GGCTTCTTGGTGTCCAGCC 60.974 63.158 0.00 0.00 34.76 4.85
2355 2419 1.073897 GCTTCTTGGTGTCCAGCCT 59.926 57.895 0.00 0.00 33.81 4.58
2356 2420 0.538287 GCTTCTTGGTGTCCAGCCTT 60.538 55.000 0.00 0.00 33.81 4.35
2357 2421 1.528129 CTTCTTGGTGTCCAGCCTTC 58.472 55.000 0.00 0.00 33.81 3.46
2358 2422 1.072965 CTTCTTGGTGTCCAGCCTTCT 59.927 52.381 0.00 0.00 33.81 2.85
2359 2423 0.397941 TCTTGGTGTCCAGCCTTCTG 59.602 55.000 0.00 0.00 40.02 3.02
2372 2436 2.205022 CCTTCTGGCTGATTGTTCCA 57.795 50.000 0.00 0.00 0.00 3.53
2373 2437 2.517959 CCTTCTGGCTGATTGTTCCAA 58.482 47.619 0.00 0.00 0.00 3.53
2374 2438 2.490903 CCTTCTGGCTGATTGTTCCAAG 59.509 50.000 0.00 0.00 0.00 3.61
2375 2439 3.415212 CTTCTGGCTGATTGTTCCAAGA 58.585 45.455 0.00 0.00 0.00 3.02
2376 2440 3.507162 TCTGGCTGATTGTTCCAAGAA 57.493 42.857 0.00 0.00 0.00 2.52
2377 2441 4.038271 TCTGGCTGATTGTTCCAAGAAT 57.962 40.909 0.00 0.00 0.00 2.40
2378 2442 3.760151 TCTGGCTGATTGTTCCAAGAATG 59.240 43.478 0.00 0.00 0.00 2.67
2379 2443 2.231964 TGGCTGATTGTTCCAAGAATGC 59.768 45.455 0.00 0.00 0.00 3.56
2380 2444 2.231964 GGCTGATTGTTCCAAGAATGCA 59.768 45.455 0.00 0.00 0.00 3.96
2381 2445 3.118884 GGCTGATTGTTCCAAGAATGCAT 60.119 43.478 0.00 0.00 0.00 3.96
2382 2446 4.501071 GCTGATTGTTCCAAGAATGCATT 58.499 39.130 12.83 12.83 0.00 3.56
2383 2447 4.933400 GCTGATTGTTCCAAGAATGCATTT 59.067 37.500 14.33 0.77 0.00 2.32
2384 2448 6.101332 GCTGATTGTTCCAAGAATGCATTTA 58.899 36.000 14.33 0.00 0.00 1.40
2385 2449 6.035327 GCTGATTGTTCCAAGAATGCATTTAC 59.965 38.462 14.33 1.29 0.00 2.01
2386 2450 7.230849 TGATTGTTCCAAGAATGCATTTACT 57.769 32.000 14.33 3.95 0.00 2.24
2387 2451 7.315142 TGATTGTTCCAAGAATGCATTTACTC 58.685 34.615 14.33 0.01 0.00 2.59
2388 2452 6.647334 TTGTTCCAAGAATGCATTTACTCA 57.353 33.333 14.33 4.71 0.00 3.41
2389 2453 6.647334 TGTTCCAAGAATGCATTTACTCAA 57.353 33.333 14.33 1.91 0.00 3.02
2390 2454 7.230849 TGTTCCAAGAATGCATTTACTCAAT 57.769 32.000 14.33 0.00 0.00 2.57
2391 2455 8.347004 TGTTCCAAGAATGCATTTACTCAATA 57.653 30.769 14.33 0.62 0.00 1.90
2392 2456 8.801299 TGTTCCAAGAATGCATTTACTCAATAA 58.199 29.630 14.33 0.00 0.00 1.40
2393 2457 9.638239 GTTCCAAGAATGCATTTACTCAATAAA 57.362 29.630 14.33 0.00 37.18 1.40
2394 2458 9.859427 TTCCAAGAATGCATTTACTCAATAAAG 57.141 29.630 14.33 0.00 36.20 1.85
2395 2459 7.975616 TCCAAGAATGCATTTACTCAATAAAGC 59.024 33.333 14.33 0.00 36.20 3.51
2396 2460 7.977853 CCAAGAATGCATTTACTCAATAAAGCT 59.022 33.333 14.33 0.00 36.20 3.74
2397 2461 9.017669 CAAGAATGCATTTACTCAATAAAGCTC 57.982 33.333 14.33 0.00 36.20 4.09
2398 2462 8.517062 AGAATGCATTTACTCAATAAAGCTCT 57.483 30.769 14.33 0.00 36.20 4.09
2399 2463 8.619546 AGAATGCATTTACTCAATAAAGCTCTC 58.380 33.333 14.33 0.00 36.20 3.20
2400 2464 8.517062 AATGCATTTACTCAATAAAGCTCTCT 57.483 30.769 5.99 0.00 36.20 3.10
2401 2465 7.312657 TGCATTTACTCAATAAAGCTCTCTG 57.687 36.000 0.00 0.00 36.20 3.35
2402 2466 7.105588 TGCATTTACTCAATAAAGCTCTCTGA 58.894 34.615 0.00 0.00 36.20 3.27
2403 2467 7.607607 TGCATTTACTCAATAAAGCTCTCTGAA 59.392 33.333 0.00 0.00 36.20 3.02
2404 2468 8.619546 GCATTTACTCAATAAAGCTCTCTGAAT 58.380 33.333 0.00 0.00 36.20 2.57
2408 2472 7.622893 ACTCAATAAAGCTCTCTGAATTTCC 57.377 36.000 0.00 0.00 0.00 3.13
2409 2473 6.601217 ACTCAATAAAGCTCTCTGAATTTCCC 59.399 38.462 0.00 0.00 0.00 3.97
2410 2474 5.888161 TCAATAAAGCTCTCTGAATTTCCCC 59.112 40.000 0.00 0.00 0.00 4.81
2411 2475 2.409948 AAGCTCTCTGAATTTCCCCG 57.590 50.000 0.00 0.00 0.00 5.73
2412 2476 0.107459 AGCTCTCTGAATTTCCCCGC 60.107 55.000 0.00 0.00 0.00 6.13
2413 2477 0.392998 GCTCTCTGAATTTCCCCGCA 60.393 55.000 0.00 0.00 0.00 5.69
2414 2478 1.950484 GCTCTCTGAATTTCCCCGCAA 60.950 52.381 0.00 0.00 0.00 4.85
2415 2479 2.436417 CTCTCTGAATTTCCCCGCAAA 58.564 47.619 0.00 0.00 0.00 3.68
2416 2480 2.819608 CTCTCTGAATTTCCCCGCAAAA 59.180 45.455 0.00 0.00 0.00 2.44
2417 2481 3.226777 TCTCTGAATTTCCCCGCAAAAA 58.773 40.909 0.00 0.00 0.00 1.94
2447 2511 9.924650 AAACGATTCTTAGTACAACACTATTCT 57.075 29.630 0.00 0.00 39.51 2.40
2448 2512 9.924650 AACGATTCTTAGTACAACACTATTCTT 57.075 29.630 0.00 0.00 39.51 2.52
2449 2513 9.924650 ACGATTCTTAGTACAACACTATTCTTT 57.075 29.630 0.00 0.00 39.51 2.52
2453 2517 9.706691 TTCTTAGTACAACACTATTCTTTCTGG 57.293 33.333 0.00 0.00 39.51 3.86
2454 2518 7.817962 TCTTAGTACAACACTATTCTTTCTGGC 59.182 37.037 0.00 0.00 39.51 4.85
2455 2519 5.865085 AGTACAACACTATTCTTTCTGGCA 58.135 37.500 0.00 0.00 34.98 4.92
2456 2520 6.296026 AGTACAACACTATTCTTTCTGGCAA 58.704 36.000 0.00 0.00 34.98 4.52
2457 2521 5.438761 ACAACACTATTCTTTCTGGCAAC 57.561 39.130 0.00 0.00 0.00 4.17
2458 2522 4.278419 ACAACACTATTCTTTCTGGCAACC 59.722 41.667 0.00 0.00 0.00 3.77
2459 2523 3.074412 ACACTATTCTTTCTGGCAACCG 58.926 45.455 0.00 0.00 0.00 4.44
2460 2524 2.420022 CACTATTCTTTCTGGCAACCGG 59.580 50.000 0.00 0.00 0.00 5.28
2461 2525 2.304761 ACTATTCTTTCTGGCAACCGGA 59.695 45.455 9.46 0.00 37.09 5.14
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 4.282195 TGTCCAAAAACATTTAATCCGCCT 59.718 37.500 0.00 0.00 0.00 5.52
1 2 4.561105 TGTCCAAAAACATTTAATCCGCC 58.439 39.130 0.00 0.00 0.00 6.13
2 3 5.120053 CCTTGTCCAAAAACATTTAATCCGC 59.880 40.000 0.00 0.00 0.00 5.54
3 4 5.637387 CCCTTGTCCAAAAACATTTAATCCG 59.363 40.000 0.00 0.00 0.00 4.18
4 5 6.764379 TCCCTTGTCCAAAAACATTTAATCC 58.236 36.000 0.00 0.00 0.00 3.01
5 6 6.368791 GCTCCCTTGTCCAAAAACATTTAATC 59.631 38.462 0.00 0.00 0.00 1.75
6 7 6.183361 TGCTCCCTTGTCCAAAAACATTTAAT 60.183 34.615 0.00 0.00 0.00 1.40
7 8 5.129485 TGCTCCCTTGTCCAAAAACATTTAA 59.871 36.000 0.00 0.00 0.00 1.52
8 9 4.651503 TGCTCCCTTGTCCAAAAACATTTA 59.348 37.500 0.00 0.00 0.00 1.40
9 10 3.454082 TGCTCCCTTGTCCAAAAACATTT 59.546 39.130 0.00 0.00 0.00 2.32
10 11 3.037549 TGCTCCCTTGTCCAAAAACATT 58.962 40.909 0.00 0.00 0.00 2.71
11 12 2.676748 TGCTCCCTTGTCCAAAAACAT 58.323 42.857 0.00 0.00 0.00 2.71
12 13 2.151502 TGCTCCCTTGTCCAAAAACA 57.848 45.000 0.00 0.00 0.00 2.83
13 14 2.351738 CGATGCTCCCTTGTCCAAAAAC 60.352 50.000 0.00 0.00 0.00 2.43
14 15 1.885887 CGATGCTCCCTTGTCCAAAAA 59.114 47.619 0.00 0.00 0.00 1.94
15 16 1.533625 CGATGCTCCCTTGTCCAAAA 58.466 50.000 0.00 0.00 0.00 2.44
16 17 0.960364 GCGATGCTCCCTTGTCCAAA 60.960 55.000 0.00 0.00 0.00 3.28
17 18 1.377202 GCGATGCTCCCTTGTCCAA 60.377 57.895 0.00 0.00 0.00 3.53
18 19 2.268920 GCGATGCTCCCTTGTCCA 59.731 61.111 0.00 0.00 0.00 4.02
19 20 2.586792 AGCGATGCTCCCTTGTCC 59.413 61.111 0.00 0.00 30.62 4.02
28 29 1.661341 CTTTTAGCCTGAGCGATGCT 58.339 50.000 0.00 0.00 46.67 3.79
29 30 0.659957 CCTTTTAGCCTGAGCGATGC 59.340 55.000 0.00 0.00 46.67 3.91
30 31 2.029838 ACCTTTTAGCCTGAGCGATG 57.970 50.000 0.00 0.00 46.67 3.84
31 32 2.789409 AACCTTTTAGCCTGAGCGAT 57.211 45.000 0.00 0.00 46.67 4.58
32 33 2.561478 AAACCTTTTAGCCTGAGCGA 57.439 45.000 0.00 0.00 46.67 4.93
33 34 3.335579 AGTAAACCTTTTAGCCTGAGCG 58.664 45.455 0.00 0.00 46.67 5.03
34 35 3.690139 GGAGTAAACCTTTTAGCCTGAGC 59.310 47.826 0.00 0.00 40.32 4.26
35 36 4.019231 AGGGAGTAAACCTTTTAGCCTGAG 60.019 45.833 0.00 0.00 33.64 3.35
36 37 3.914435 AGGGAGTAAACCTTTTAGCCTGA 59.086 43.478 0.00 0.00 33.64 3.86
37 38 4.262617 GAGGGAGTAAACCTTTTAGCCTG 58.737 47.826 0.00 0.00 38.79 4.85
38 39 3.266254 GGAGGGAGTAAACCTTTTAGCCT 59.734 47.826 0.00 0.00 38.79 4.58
39 40 3.618351 GGAGGGAGTAAACCTTTTAGCC 58.382 50.000 0.00 0.00 38.79 3.93
40 41 3.268330 CGGAGGGAGTAAACCTTTTAGC 58.732 50.000 0.00 0.00 38.79 3.09
41 42 4.222366 AGACGGAGGGAGTAAACCTTTTAG 59.778 45.833 0.00 0.00 38.79 1.85
42 43 4.162651 AGACGGAGGGAGTAAACCTTTTA 58.837 43.478 0.00 0.00 38.79 1.52
43 44 2.977580 AGACGGAGGGAGTAAACCTTTT 59.022 45.455 0.00 0.00 38.79 2.27
44 45 2.566279 GAGACGGAGGGAGTAAACCTTT 59.434 50.000 0.00 0.00 38.79 3.11
45 46 2.177734 GAGACGGAGGGAGTAAACCTT 58.822 52.381 0.00 0.00 38.79 3.50
46 47 1.076677 TGAGACGGAGGGAGTAAACCT 59.923 52.381 0.00 0.00 42.18 3.50
47 48 1.477295 CTGAGACGGAGGGAGTAAACC 59.523 57.143 0.00 0.00 0.00 3.27
48 49 2.169330 ACTGAGACGGAGGGAGTAAAC 58.831 52.381 0.00 0.00 0.00 2.01
49 50 2.599408 ACTGAGACGGAGGGAGTAAA 57.401 50.000 0.00 0.00 0.00 2.01
50 51 2.599408 AACTGAGACGGAGGGAGTAA 57.401 50.000 0.00 0.00 0.00 2.24
51 52 2.599408 AAACTGAGACGGAGGGAGTA 57.401 50.000 0.00 0.00 0.00 2.59
52 53 2.169330 GTAAACTGAGACGGAGGGAGT 58.831 52.381 0.00 0.00 0.00 3.85
53 54 2.168496 TGTAAACTGAGACGGAGGGAG 58.832 52.381 0.00 0.00 0.00 4.30
54 55 2.297698 TGTAAACTGAGACGGAGGGA 57.702 50.000 0.00 0.00 0.00 4.20
55 56 3.396260 TTTGTAAACTGAGACGGAGGG 57.604 47.619 0.00 0.00 0.00 4.30
56 57 3.933332 GGATTTGTAAACTGAGACGGAGG 59.067 47.826 0.00 0.00 0.00 4.30
57 58 4.822026 AGGATTTGTAAACTGAGACGGAG 58.178 43.478 0.00 0.00 0.00 4.63
58 59 4.884668 AGGATTTGTAAACTGAGACGGA 57.115 40.909 0.00 0.00 0.00 4.69
59 60 4.561606 CGTAGGATTTGTAAACTGAGACGG 59.438 45.833 0.00 0.00 0.00 4.79
60 61 5.159209 ACGTAGGATTTGTAAACTGAGACG 58.841 41.667 0.00 0.00 0.00 4.18
61 62 9.793252 TTATACGTAGGATTTGTAAACTGAGAC 57.207 33.333 0.08 0.00 0.00 3.36
71 72 9.760077 CAACCTAGATTTATACGTAGGATTTGT 57.240 33.333 0.08 0.00 36.34 2.83
72 73 8.709646 GCAACCTAGATTTATACGTAGGATTTG 58.290 37.037 0.08 0.00 36.34 2.32
73 74 7.876582 GGCAACCTAGATTTATACGTAGGATTT 59.123 37.037 0.08 0.00 36.34 2.17
74 75 7.015877 TGGCAACCTAGATTTATACGTAGGATT 59.984 37.037 0.08 0.00 36.34 3.01
75 76 6.495872 TGGCAACCTAGATTTATACGTAGGAT 59.504 38.462 0.08 0.00 36.34 3.24
76 77 5.834742 TGGCAACCTAGATTTATACGTAGGA 59.165 40.000 0.08 0.00 36.34 2.94
77 78 6.092955 TGGCAACCTAGATTTATACGTAGG 57.907 41.667 0.08 0.00 38.45 3.18
78 79 8.603242 AATTGGCAACCTAGATTTATACGTAG 57.397 34.615 0.00 0.00 0.00 3.51
79 80 8.967664 AAATTGGCAACCTAGATTTATACGTA 57.032 30.769 0.00 0.00 0.00 3.57
80 81 7.875327 AAATTGGCAACCTAGATTTATACGT 57.125 32.000 0.00 0.00 0.00 3.57
84 85 8.082242 GCGATAAAATTGGCAACCTAGATTTAT 58.918 33.333 0.00 7.25 0.00 1.40
85 86 7.422399 GCGATAAAATTGGCAACCTAGATTTA 58.578 34.615 0.00 2.80 0.00 1.40
86 87 6.273071 GCGATAAAATTGGCAACCTAGATTT 58.727 36.000 0.00 0.00 0.00 2.17
87 88 5.221244 GGCGATAAAATTGGCAACCTAGATT 60.221 40.000 0.00 0.00 38.97 2.40
88 89 4.278419 GGCGATAAAATTGGCAACCTAGAT 59.722 41.667 0.00 0.00 38.97 1.98
89 90 3.630312 GGCGATAAAATTGGCAACCTAGA 59.370 43.478 0.00 0.00 38.97 2.43
90 91 3.243401 GGGCGATAAAATTGGCAACCTAG 60.243 47.826 0.00 0.00 40.80 3.02
91 92 2.691011 GGGCGATAAAATTGGCAACCTA 59.309 45.455 0.00 0.00 40.80 3.08
92 93 1.480545 GGGCGATAAAATTGGCAACCT 59.519 47.619 0.00 0.00 40.80 3.50
93 94 1.480545 AGGGCGATAAAATTGGCAACC 59.519 47.619 0.00 0.00 40.80 3.77
94 95 2.959507 AGGGCGATAAAATTGGCAAC 57.040 45.000 0.00 0.00 40.80 4.17
95 96 6.909550 ATATTAGGGCGATAAAATTGGCAA 57.090 33.333 0.68 0.68 40.80 4.52
96 97 8.301002 GTTTATATTAGGGCGATAAAATTGGCA 58.699 33.333 3.44 0.00 40.80 4.92
97 98 8.301002 TGTTTATATTAGGGCGATAAAATTGGC 58.699 33.333 0.00 0.00 38.44 4.52
107 108 9.999660 TGTGTTATATTGTTTATATTAGGGCGA 57.000 29.630 0.00 0.00 31.80 5.54
142 143 9.136323 ACTTCAGATGTTCTATTTTCAAAAGGT 57.864 29.630 0.00 0.00 0.00 3.50
143 144 9.971922 AACTTCAGATGTTCTATTTTCAAAAGG 57.028 29.630 0.00 0.00 0.00 3.11
190 191 9.860650 TGACCAACCTAATGCAAGTTATATATT 57.139 29.630 0.00 0.00 0.00 1.28
191 192 9.860650 TTGACCAACCTAATGCAAGTTATATAT 57.139 29.630 0.00 0.00 0.00 0.86
192 193 9.688091 TTTGACCAACCTAATGCAAGTTATATA 57.312 29.630 0.00 0.00 0.00 0.86
193 194 8.588290 TTTGACCAACCTAATGCAAGTTATAT 57.412 30.769 0.00 0.00 0.00 0.86
194 195 8.588290 ATTTGACCAACCTAATGCAAGTTATA 57.412 30.769 0.00 0.00 0.00 0.98
195 196 6.909550 TTTGACCAACCTAATGCAAGTTAT 57.090 33.333 0.00 0.00 0.00 1.89
196 197 6.909550 ATTTGACCAACCTAATGCAAGTTA 57.090 33.333 0.00 0.00 0.00 2.24
197 198 5.806654 ATTTGACCAACCTAATGCAAGTT 57.193 34.783 0.00 0.00 0.00 2.66
198 199 5.304101 TCAATTTGACCAACCTAATGCAAGT 59.696 36.000 0.00 0.00 0.00 3.16
199 200 5.634859 GTCAATTTGACCAACCTAATGCAAG 59.365 40.000 17.07 0.00 41.37 4.01
200 201 5.537188 GTCAATTTGACCAACCTAATGCAA 58.463 37.500 17.07 0.00 41.37 4.08
201 202 4.320861 CGTCAATTTGACCAACCTAATGCA 60.321 41.667 20.87 0.00 44.20 3.96
202 203 4.083003 TCGTCAATTTGACCAACCTAATGC 60.083 41.667 20.87 0.00 44.20 3.56
203 204 5.181245 AGTCGTCAATTTGACCAACCTAATG 59.819 40.000 20.87 6.48 44.20 1.90
204 205 5.313712 AGTCGTCAATTTGACCAACCTAAT 58.686 37.500 20.87 4.38 44.20 1.73
205 206 4.710324 AGTCGTCAATTTGACCAACCTAA 58.290 39.130 20.87 0.00 44.20 2.69
206 207 4.345859 AGTCGTCAATTTGACCAACCTA 57.654 40.909 20.87 0.96 44.20 3.08
207 208 3.208747 AGTCGTCAATTTGACCAACCT 57.791 42.857 20.87 10.32 44.20 3.50
208 209 3.982576 AAGTCGTCAATTTGACCAACC 57.017 42.857 20.87 8.54 44.20 3.77
209 210 4.083484 CCCTAAGTCGTCAATTTGACCAAC 60.083 45.833 20.87 18.36 44.20 3.77
210 211 4.069304 CCCTAAGTCGTCAATTTGACCAA 58.931 43.478 20.87 9.06 44.20 3.67
211 212 3.325425 TCCCTAAGTCGTCAATTTGACCA 59.675 43.478 20.87 8.24 44.20 4.02
212 213 3.934068 TCCCTAAGTCGTCAATTTGACC 58.066 45.455 20.87 10.06 44.20 4.02
213 214 5.231568 CGTATCCCTAAGTCGTCAATTTGAC 59.768 44.000 17.76 17.76 43.65 3.18
214 215 5.345702 CGTATCCCTAAGTCGTCAATTTGA 58.654 41.667 0.00 0.00 0.00 2.69
215 216 4.025979 GCGTATCCCTAAGTCGTCAATTTG 60.026 45.833 0.00 0.00 0.00 2.32
216 217 4.117685 GCGTATCCCTAAGTCGTCAATTT 58.882 43.478 0.00 0.00 0.00 1.82
217 218 3.714391 GCGTATCCCTAAGTCGTCAATT 58.286 45.455 0.00 0.00 0.00 2.32
218 219 2.287427 CGCGTATCCCTAAGTCGTCAAT 60.287 50.000 0.00 0.00 0.00 2.57
219 220 1.064505 CGCGTATCCCTAAGTCGTCAA 59.935 52.381 0.00 0.00 0.00 3.18
220 221 0.659427 CGCGTATCCCTAAGTCGTCA 59.341 55.000 0.00 0.00 0.00 4.35
221 222 0.659711 GCGCGTATCCCTAAGTCGTC 60.660 60.000 8.43 0.00 0.00 4.20
222 223 1.358046 GCGCGTATCCCTAAGTCGT 59.642 57.895 8.43 0.00 0.00 4.34
223 224 0.933509 GTGCGCGTATCCCTAAGTCG 60.934 60.000 8.43 0.00 0.00 4.18
224 225 0.933509 CGTGCGCGTATCCCTAAGTC 60.934 60.000 12.43 0.00 0.00 3.01
225 226 1.065273 CGTGCGCGTATCCCTAAGT 59.935 57.895 12.43 0.00 0.00 2.24
226 227 2.300787 GCGTGCGCGTATCCCTAAG 61.301 63.158 22.18 0.00 40.81 2.18
227 228 2.278989 GCGTGCGCGTATCCCTAA 60.279 61.111 22.18 0.00 40.81 2.69
228 229 4.274700 GGCGTGCGCGTATCCCTA 62.275 66.667 22.18 0.00 43.06 3.53
232 233 3.761445 TACAGGGCGTGCGCGTATC 62.761 63.158 22.18 11.01 43.06 2.24
233 234 2.839043 TTTACAGGGCGTGCGCGTAT 62.839 55.000 22.18 4.49 43.06 3.06
234 235 3.570621 TTTACAGGGCGTGCGCGTA 62.571 57.895 22.18 0.00 43.06 4.42
235 236 4.973055 TTTACAGGGCGTGCGCGT 62.973 61.111 22.18 2.94 43.06 6.01
236 237 4.439472 GTTTACAGGGCGTGCGCG 62.439 66.667 16.86 16.86 43.06 6.86
237 238 3.047877 AGTTTACAGGGCGTGCGC 61.048 61.111 7.17 8.17 41.06 6.09
238 239 1.225376 TTCAGTTTACAGGGCGTGCG 61.225 55.000 7.17 0.00 0.00 5.34
239 240 0.948678 TTTCAGTTTACAGGGCGTGC 59.051 50.000 7.17 0.00 0.00 5.34
240 241 2.480419 CTCTTTCAGTTTACAGGGCGTG 59.520 50.000 5.50 5.50 0.00 5.34
241 242 2.367567 TCTCTTTCAGTTTACAGGGCGT 59.632 45.455 0.00 0.00 0.00 5.68
242 243 2.996621 CTCTCTTTCAGTTTACAGGGCG 59.003 50.000 0.00 0.00 0.00 6.13
243 244 3.339141 CCTCTCTTTCAGTTTACAGGGC 58.661 50.000 0.00 0.00 0.00 5.19
244 245 3.583086 TCCCTCTCTTTCAGTTTACAGGG 59.417 47.826 0.00 0.00 40.83 4.45
245 246 4.284746 ACTCCCTCTCTTTCAGTTTACAGG 59.715 45.833 0.00 0.00 0.00 4.00
246 247 5.476091 ACTCCCTCTCTTTCAGTTTACAG 57.524 43.478 0.00 0.00 0.00 2.74
247 248 8.840200 ATATACTCCCTCTCTTTCAGTTTACA 57.160 34.615 0.00 0.00 0.00 2.41
251 252 9.454859 CAAAAATATACTCCCTCTCTTTCAGTT 57.545 33.333 0.00 0.00 0.00 3.16
252 253 8.606830 ACAAAAATATACTCCCTCTCTTTCAGT 58.393 33.333 0.00 0.00 0.00 3.41
253 254 8.887717 CACAAAAATATACTCCCTCTCTTTCAG 58.112 37.037 0.00 0.00 0.00 3.02
254 255 7.829211 CCACAAAAATATACTCCCTCTCTTTCA 59.171 37.037 0.00 0.00 0.00 2.69
255 256 7.201741 GCCACAAAAATATACTCCCTCTCTTTC 60.202 40.741 0.00 0.00 0.00 2.62
256 257 6.603599 GCCACAAAAATATACTCCCTCTCTTT 59.396 38.462 0.00 0.00 0.00 2.52
257 258 6.069381 AGCCACAAAAATATACTCCCTCTCTT 60.069 38.462 0.00 0.00 0.00 2.85
258 259 5.430089 AGCCACAAAAATATACTCCCTCTCT 59.570 40.000 0.00 0.00 0.00 3.10
259 260 5.685728 AGCCACAAAAATATACTCCCTCTC 58.314 41.667 0.00 0.00 0.00 3.20
260 261 5.717119 AGCCACAAAAATATACTCCCTCT 57.283 39.130 0.00 0.00 0.00 3.69
261 262 5.067805 CCAAGCCACAAAAATATACTCCCTC 59.932 44.000 0.00 0.00 0.00 4.30
262 263 4.956075 CCAAGCCACAAAAATATACTCCCT 59.044 41.667 0.00 0.00 0.00 4.20
263 264 4.709886 ACCAAGCCACAAAAATATACTCCC 59.290 41.667 0.00 0.00 0.00 4.30
264 265 5.914898 ACCAAGCCACAAAAATATACTCC 57.085 39.130 0.00 0.00 0.00 3.85
265 266 9.353999 CTTAAACCAAGCCACAAAAATATACTC 57.646 33.333 0.00 0.00 0.00 2.59
266 267 8.311109 CCTTAAACCAAGCCACAAAAATATACT 58.689 33.333 0.00 0.00 32.41 2.12
267 268 7.547722 CCCTTAAACCAAGCCACAAAAATATAC 59.452 37.037 0.00 0.00 32.41 1.47
279 280 0.603065 CTGCACCCTTAAACCAAGCC 59.397 55.000 0.00 0.00 32.41 4.35
371 414 0.463654 GTGCGTCCTTGGCATATGGA 60.464 55.000 4.56 0.00 43.19 3.41
753 796 3.050275 GTGGCCGTGCTGGTTCTC 61.050 66.667 0.00 0.00 41.21 2.87
819 862 2.713967 GGTGGCAATGGCGAGCATT 61.714 57.895 0.87 0.00 44.38 3.56
843 886 1.221466 GGCCTTGGCTTTTCGTTTGC 61.221 55.000 11.71 0.00 0.00 3.68
865 908 2.316687 GACACTAATGACGCGCGC 59.683 61.111 32.58 23.91 0.00 6.86
870 913 1.067693 TTGCAGCGACACTAATGACG 58.932 50.000 0.00 0.00 45.13 4.35
872 915 1.398041 GCATTGCAGCGACACTAATGA 59.602 47.619 3.15 0.00 32.05 2.57
873 916 1.130938 TGCATTGCAGCGACACTAATG 59.869 47.619 7.38 0.00 37.31 1.90
874 917 1.452110 TGCATTGCAGCGACACTAAT 58.548 45.000 7.38 0.00 37.31 1.73
875 918 1.452110 ATGCATTGCAGCGACACTAA 58.548 45.000 17.52 0.00 43.65 2.24
876 919 1.933181 GTATGCATTGCAGCGACACTA 59.067 47.619 17.52 0.00 43.65 2.74
877 920 0.729116 GTATGCATTGCAGCGACACT 59.271 50.000 17.52 0.62 43.65 3.55
878 921 0.587242 CGTATGCATTGCAGCGACAC 60.587 55.000 24.66 13.36 43.65 3.67
879 922 1.715000 CGTATGCATTGCAGCGACA 59.285 52.632 24.66 4.59 43.65 4.35
880 923 1.652329 GCGTATGCATTGCAGCGAC 60.652 57.895 29.73 20.34 43.65 5.19
881 924 2.708865 GCGTATGCATTGCAGCGA 59.291 55.556 29.73 12.77 43.65 4.93
883 926 2.352686 CGGCGTATGCATTGCAGC 60.353 61.111 17.52 14.32 43.65 5.25
884 927 1.713937 TTCCGGCGTATGCATTGCAG 61.714 55.000 17.52 17.43 43.65 4.41
885 928 1.100463 ATTCCGGCGTATGCATTGCA 61.100 50.000 14.72 14.72 45.35 4.08
887 930 5.332280 CGTATATATTCCGGCGTATGCATTG 60.332 44.000 3.54 0.00 45.35 2.82
888 931 4.743151 CGTATATATTCCGGCGTATGCATT 59.257 41.667 3.54 0.00 45.35 3.56
889 932 4.202080 ACGTATATATTCCGGCGTATGCAT 60.202 41.667 9.59 3.79 45.35 3.96
890 933 3.129113 ACGTATATATTCCGGCGTATGCA 59.871 43.478 9.59 0.00 45.35 3.96
891 934 3.699067 ACGTATATATTCCGGCGTATGC 58.301 45.455 6.01 0.00 41.71 3.14
892 935 5.008019 ACCTACGTATATATTCCGGCGTATG 59.992 44.000 6.01 2.21 34.93 2.39
894 937 4.513442 ACCTACGTATATATTCCGGCGTA 58.487 43.478 6.01 1.10 34.38 4.42
895 938 3.347216 ACCTACGTATATATTCCGGCGT 58.653 45.455 6.01 0.00 36.52 5.68
896 939 3.624861 AGACCTACGTATATATTCCGGCG 59.375 47.826 0.00 0.00 0.00 6.46
897 940 5.573337 AAGACCTACGTATATATTCCGGC 57.427 43.478 0.00 0.00 0.00 6.13
898 941 6.917533 ACAAAGACCTACGTATATATTCCGG 58.082 40.000 0.00 0.00 0.00 5.14
899 942 7.864379 ACAACAAAGACCTACGTATATATTCCG 59.136 37.037 0.00 0.00 0.00 4.30
903 946 9.635520 GCATACAACAAAGACCTACGTATATAT 57.364 33.333 0.00 0.00 0.00 0.86
904 947 8.631797 TGCATACAACAAAGACCTACGTATATA 58.368 33.333 0.00 0.00 0.00 0.86
905 948 7.494211 TGCATACAACAAAGACCTACGTATAT 58.506 34.615 0.00 0.00 0.00 0.86
906 949 6.865411 TGCATACAACAAAGACCTACGTATA 58.135 36.000 0.00 0.00 0.00 1.47
907 950 5.726397 TGCATACAACAAAGACCTACGTAT 58.274 37.500 0.00 0.00 0.00 3.06
908 951 5.136816 TGCATACAACAAAGACCTACGTA 57.863 39.130 0.00 0.00 0.00 3.57
909 952 3.997762 TGCATACAACAAAGACCTACGT 58.002 40.909 0.00 0.00 0.00 3.57
910 953 5.323900 CAATGCATACAACAAAGACCTACG 58.676 41.667 0.00 0.00 0.00 3.51
1164 1207 2.202878 CCGTACCTGGTGATGGCG 60.203 66.667 10.23 6.15 0.00 5.69
1251 1294 1.828832 CGGAGTTCAGCGACATACTC 58.171 55.000 0.00 0.00 37.01 2.59
1593 1636 2.109799 CGGATGATGCTCGGCCTT 59.890 61.111 0.00 0.00 0.00 4.35
1604 1647 2.831284 TCATCGTCGGGCGGATGA 60.831 61.111 17.78 17.78 44.51 2.92
1930 1974 9.519905 CGCAAATGATTTATTTTTCTTCACTTG 57.480 29.630 0.00 0.00 36.87 3.16
1942 1986 7.826690 ACAACTAACTCCGCAAATGATTTATT 58.173 30.769 0.00 0.00 0.00 1.40
1971 2019 8.818057 GTTAGCAAGATGACATTTTATCGTACT 58.182 33.333 0.00 0.00 0.00 2.73
1989 2037 0.716108 CGCTCGTTCCAGTTAGCAAG 59.284 55.000 0.00 0.00 34.60 4.01
2114 2178 0.322975 AAGCAGTGCGAGAATCCACT 59.677 50.000 10.00 0.00 43.98 4.00
2115 2179 1.929836 CTAAGCAGTGCGAGAATCCAC 59.070 52.381 10.00 0.00 36.81 4.02
2116 2180 1.824852 TCTAAGCAGTGCGAGAATCCA 59.175 47.619 17.38 0.00 0.00 3.41
2117 2181 2.159170 ACTCTAAGCAGTGCGAGAATCC 60.159 50.000 20.96 0.00 0.00 3.01
2118 2182 3.157932 ACTCTAAGCAGTGCGAGAATC 57.842 47.619 20.96 0.00 0.00 2.52
2119 2183 3.257393 CAACTCTAAGCAGTGCGAGAAT 58.743 45.455 20.96 10.95 0.00 2.40
2120 2184 2.610479 CCAACTCTAAGCAGTGCGAGAA 60.610 50.000 20.96 4.67 0.00 2.87
2121 2185 1.067565 CCAACTCTAAGCAGTGCGAGA 60.068 52.381 20.96 19.59 0.00 4.04
2122 2186 1.337260 ACCAACTCTAAGCAGTGCGAG 60.337 52.381 10.00 12.82 0.00 5.03
2123 2187 0.679505 ACCAACTCTAAGCAGTGCGA 59.320 50.000 10.00 0.54 0.00 5.10
2124 2188 0.792640 CACCAACTCTAAGCAGTGCG 59.207 55.000 10.00 0.00 0.00 5.34
2125 2189 1.801178 GTCACCAACTCTAAGCAGTGC 59.199 52.381 7.13 7.13 0.00 4.40
2126 2190 2.802816 GTGTCACCAACTCTAAGCAGTG 59.197 50.000 0.00 0.00 0.00 3.66
2127 2191 2.700897 AGTGTCACCAACTCTAAGCAGT 59.299 45.455 0.00 0.00 30.04 4.40
2128 2192 3.321497 GAGTGTCACCAACTCTAAGCAG 58.679 50.000 0.00 0.00 40.77 4.24
2129 2193 3.386768 GAGTGTCACCAACTCTAAGCA 57.613 47.619 0.00 0.00 40.77 3.91
2135 2199 1.270358 GGTCCAGAGTGTCACCAACTC 60.270 57.143 0.00 0.00 43.66 3.01
2136 2200 0.759346 GGTCCAGAGTGTCACCAACT 59.241 55.000 0.00 0.00 0.00 3.16
2137 2201 0.468226 TGGTCCAGAGTGTCACCAAC 59.532 55.000 0.00 0.00 35.93 3.77
2138 2202 0.468226 GTGGTCCAGAGTGTCACCAA 59.532 55.000 0.00 0.00 40.64 3.67
2139 2203 0.398522 AGTGGTCCAGAGTGTCACCA 60.399 55.000 0.00 0.00 36.53 4.17
2140 2204 0.318762 GAGTGGTCCAGAGTGTCACC 59.681 60.000 0.00 0.00 0.00 4.02
2141 2205 1.040646 TGAGTGGTCCAGAGTGTCAC 58.959 55.000 0.00 0.00 0.00 3.67
2142 2206 1.895798 GATGAGTGGTCCAGAGTGTCA 59.104 52.381 0.00 0.00 0.00 3.58
2143 2207 1.895798 TGATGAGTGGTCCAGAGTGTC 59.104 52.381 0.00 0.00 0.00 3.67
2144 2208 2.015456 TGATGAGTGGTCCAGAGTGT 57.985 50.000 0.00 0.00 0.00 3.55
2145 2209 4.743057 TTATGATGAGTGGTCCAGAGTG 57.257 45.455 0.00 0.00 0.00 3.51
2146 2210 5.664908 AGAATTATGATGAGTGGTCCAGAGT 59.335 40.000 0.00 0.00 0.00 3.24
2147 2211 6.172136 AGAATTATGATGAGTGGTCCAGAG 57.828 41.667 0.00 0.00 0.00 3.35
2148 2212 5.221322 CGAGAATTATGATGAGTGGTCCAGA 60.221 44.000 0.00 0.00 0.00 3.86
2149 2213 4.987285 CGAGAATTATGATGAGTGGTCCAG 59.013 45.833 0.00 0.00 0.00 3.86
2150 2214 4.405680 ACGAGAATTATGATGAGTGGTCCA 59.594 41.667 0.00 0.00 0.00 4.02
2151 2215 4.950050 ACGAGAATTATGATGAGTGGTCC 58.050 43.478 0.00 0.00 0.00 4.46
2152 2216 6.535150 TCAAACGAGAATTATGATGAGTGGTC 59.465 38.462 0.00 0.00 0.00 4.02
2153 2217 6.406370 TCAAACGAGAATTATGATGAGTGGT 58.594 36.000 0.00 0.00 0.00 4.16
2154 2218 6.908870 TCAAACGAGAATTATGATGAGTGG 57.091 37.500 0.00 0.00 0.00 4.00
2155 2219 8.393366 ACAATCAAACGAGAATTATGATGAGTG 58.607 33.333 0.00 0.00 37.57 3.51
2156 2220 8.498054 ACAATCAAACGAGAATTATGATGAGT 57.502 30.769 0.00 0.00 31.49 3.41
2158 2222 8.551205 GCTACAATCAAACGAGAATTATGATGA 58.449 33.333 0.00 0.00 31.49 2.92
2159 2223 8.554528 AGCTACAATCAAACGAGAATTATGATG 58.445 33.333 0.00 0.00 31.49 3.07
2160 2224 8.668510 AGCTACAATCAAACGAGAATTATGAT 57.331 30.769 0.00 0.00 32.36 2.45
2161 2225 7.224753 GGAGCTACAATCAAACGAGAATTATGA 59.775 37.037 0.00 0.00 0.00 2.15
2162 2226 7.225538 AGGAGCTACAATCAAACGAGAATTATG 59.774 37.037 0.00 0.00 0.00 1.90
2163 2227 7.275920 AGGAGCTACAATCAAACGAGAATTAT 58.724 34.615 0.00 0.00 0.00 1.28
2164 2228 6.640518 AGGAGCTACAATCAAACGAGAATTA 58.359 36.000 0.00 0.00 0.00 1.40
2165 2229 5.491982 AGGAGCTACAATCAAACGAGAATT 58.508 37.500 0.00 0.00 0.00 2.17
2166 2230 5.091261 AGGAGCTACAATCAAACGAGAAT 57.909 39.130 0.00 0.00 0.00 2.40
2167 2231 4.537135 AGGAGCTACAATCAAACGAGAA 57.463 40.909 0.00 0.00 0.00 2.87
2168 2232 4.537135 AAGGAGCTACAATCAAACGAGA 57.463 40.909 0.00 0.00 0.00 4.04
2169 2233 5.869888 AGTAAAGGAGCTACAATCAAACGAG 59.130 40.000 0.00 0.00 0.00 4.18
2170 2234 5.790593 AGTAAAGGAGCTACAATCAAACGA 58.209 37.500 0.00 0.00 0.00 3.85
2171 2235 6.481954 AAGTAAAGGAGCTACAATCAAACG 57.518 37.500 0.00 0.00 0.00 3.60
2175 2239 9.787435 TCTTTAAAAGTAAAGGAGCTACAATCA 57.213 29.630 0.00 0.00 44.36 2.57
2179 2243 9.010029 CCAATCTTTAAAAGTAAAGGAGCTACA 57.990 33.333 0.00 0.00 44.36 2.74
2180 2244 9.227777 TCCAATCTTTAAAAGTAAAGGAGCTAC 57.772 33.333 6.43 0.00 44.36 3.58
2181 2245 9.449719 CTCCAATCTTTAAAAGTAAAGGAGCTA 57.550 33.333 8.96 0.00 44.36 3.32
2182 2246 8.164070 TCTCCAATCTTTAAAAGTAAAGGAGCT 58.836 33.333 11.62 0.00 44.36 4.09
2183 2247 8.336801 TCTCCAATCTTTAAAAGTAAAGGAGC 57.663 34.615 11.62 0.00 44.36 4.70
2184 2248 8.454894 GCTCTCCAATCTTTAAAAGTAAAGGAG 58.545 37.037 11.16 11.16 44.36 3.69
2185 2249 8.164070 AGCTCTCCAATCTTTAAAAGTAAAGGA 58.836 33.333 6.43 3.64 44.36 3.36
2186 2250 8.341892 AGCTCTCCAATCTTTAAAAGTAAAGG 57.658 34.615 6.43 0.00 44.36 3.11
2190 2254 9.436957 CACTAAGCTCTCCAATCTTTAAAAGTA 57.563 33.333 0.00 0.00 0.00 2.24
2191 2255 7.939588 ACACTAAGCTCTCCAATCTTTAAAAGT 59.060 33.333 0.00 0.00 0.00 2.66
2192 2256 8.329203 ACACTAAGCTCTCCAATCTTTAAAAG 57.671 34.615 0.00 0.00 0.00 2.27
2193 2257 8.691661 AACACTAAGCTCTCCAATCTTTAAAA 57.308 30.769 0.00 0.00 0.00 1.52
2194 2258 7.936847 TGAACACTAAGCTCTCCAATCTTTAAA 59.063 33.333 0.00 0.00 0.00 1.52
2195 2259 7.450074 TGAACACTAAGCTCTCCAATCTTTAA 58.550 34.615 0.00 0.00 0.00 1.52
2196 2260 7.004555 TGAACACTAAGCTCTCCAATCTTTA 57.995 36.000 0.00 0.00 0.00 1.85
2197 2261 5.869579 TGAACACTAAGCTCTCCAATCTTT 58.130 37.500 0.00 0.00 0.00 2.52
2198 2262 5.489792 TGAACACTAAGCTCTCCAATCTT 57.510 39.130 0.00 0.00 0.00 2.40
2199 2263 5.489792 TTGAACACTAAGCTCTCCAATCT 57.510 39.130 0.00 0.00 0.00 2.40
2200 2264 6.749923 AATTGAACACTAAGCTCTCCAATC 57.250 37.500 0.00 0.00 0.00 2.67
2201 2265 7.309438 GGAAAATTGAACACTAAGCTCTCCAAT 60.309 37.037 0.00 0.00 0.00 3.16
2202 2266 6.016276 GGAAAATTGAACACTAAGCTCTCCAA 60.016 38.462 0.00 0.00 0.00 3.53
2203 2267 5.473504 GGAAAATTGAACACTAAGCTCTCCA 59.526 40.000 0.00 0.00 0.00 3.86
2204 2268 5.707764 AGGAAAATTGAACACTAAGCTCTCC 59.292 40.000 0.00 0.00 0.00 3.71
2205 2269 6.652900 AGAGGAAAATTGAACACTAAGCTCTC 59.347 38.462 0.00 0.00 0.00 3.20
2206 2270 6.538263 AGAGGAAAATTGAACACTAAGCTCT 58.462 36.000 0.00 0.00 0.00 4.09
2207 2271 6.809630 AGAGGAAAATTGAACACTAAGCTC 57.190 37.500 0.00 0.00 0.00 4.09
2208 2272 7.588497 AAAGAGGAAAATTGAACACTAAGCT 57.412 32.000 0.00 0.00 0.00 3.74
2209 2273 7.706607 ACAAAAGAGGAAAATTGAACACTAAGC 59.293 33.333 0.00 0.00 0.00 3.09
2210 2274 9.586435 AACAAAAGAGGAAAATTGAACACTAAG 57.414 29.630 0.00 0.00 0.00 2.18
2234 2298 6.801862 GCTGACCTGTTTACATGTTGAATAAC 59.198 38.462 2.30 2.43 37.32 1.89
2235 2299 6.714810 AGCTGACCTGTTTACATGTTGAATAA 59.285 34.615 2.30 0.00 0.00 1.40
2236 2300 6.237901 AGCTGACCTGTTTACATGTTGAATA 58.762 36.000 2.30 0.00 0.00 1.75
2237 2301 5.072741 AGCTGACCTGTTTACATGTTGAAT 58.927 37.500 2.30 0.00 0.00 2.57
2238 2302 4.460263 AGCTGACCTGTTTACATGTTGAA 58.540 39.130 2.30 0.00 0.00 2.69
2239 2303 4.085357 AGCTGACCTGTTTACATGTTGA 57.915 40.909 2.30 0.00 0.00 3.18
2240 2304 5.940192 TTAGCTGACCTGTTTACATGTTG 57.060 39.130 2.30 0.00 0.00 3.33
2241 2305 6.476378 AGATTAGCTGACCTGTTTACATGTT 58.524 36.000 2.30 0.00 0.00 2.71
2242 2306 6.054860 AGATTAGCTGACCTGTTTACATGT 57.945 37.500 2.69 2.69 0.00 3.21
2243 2307 5.525378 GGAGATTAGCTGACCTGTTTACATG 59.475 44.000 0.00 0.00 0.00 3.21
2244 2308 5.396884 GGGAGATTAGCTGACCTGTTTACAT 60.397 44.000 0.00 0.00 0.00 2.29
2245 2309 4.081087 GGGAGATTAGCTGACCTGTTTACA 60.081 45.833 0.00 0.00 0.00 2.41
2246 2310 4.443621 GGGAGATTAGCTGACCTGTTTAC 58.556 47.826 0.00 0.00 0.00 2.01
2247 2311 3.132289 CGGGAGATTAGCTGACCTGTTTA 59.868 47.826 0.00 0.00 0.00 2.01
2248 2312 2.093447 CGGGAGATTAGCTGACCTGTTT 60.093 50.000 0.00 0.00 0.00 2.83
2249 2313 1.482593 CGGGAGATTAGCTGACCTGTT 59.517 52.381 0.00 0.00 0.00 3.16
2250 2314 1.115467 CGGGAGATTAGCTGACCTGT 58.885 55.000 0.00 0.00 0.00 4.00
2251 2315 0.390860 CCGGGAGATTAGCTGACCTG 59.609 60.000 0.00 0.00 0.00 4.00
2252 2316 1.403687 GCCGGGAGATTAGCTGACCT 61.404 60.000 2.18 0.00 0.00 3.85
2253 2317 1.069935 GCCGGGAGATTAGCTGACC 59.930 63.158 2.18 0.00 0.00 4.02
2254 2318 0.032815 GAGCCGGGAGATTAGCTGAC 59.967 60.000 2.18 0.00 35.23 3.51
2255 2319 0.397114 TGAGCCGGGAGATTAGCTGA 60.397 55.000 2.18 0.00 35.23 4.26
2256 2320 0.683973 ATGAGCCGGGAGATTAGCTG 59.316 55.000 2.18 0.00 35.23 4.24
2257 2321 1.428869 AATGAGCCGGGAGATTAGCT 58.571 50.000 2.18 0.00 38.56 3.32
2258 2322 1.876156 CAAATGAGCCGGGAGATTAGC 59.124 52.381 2.18 0.00 0.00 3.09
2259 2323 2.874701 CACAAATGAGCCGGGAGATTAG 59.125 50.000 2.18 0.00 0.00 1.73
2260 2324 2.238646 ACACAAATGAGCCGGGAGATTA 59.761 45.455 2.18 0.00 0.00 1.75
2261 2325 1.004745 ACACAAATGAGCCGGGAGATT 59.995 47.619 2.18 0.00 0.00 2.40
2262 2326 0.620556 ACACAAATGAGCCGGGAGAT 59.379 50.000 2.18 0.00 0.00 2.75
2263 2327 0.321564 CACACAAATGAGCCGGGAGA 60.322 55.000 2.18 0.00 0.00 3.71
2264 2328 1.926511 GCACACAAATGAGCCGGGAG 61.927 60.000 2.18 0.00 36.51 4.30
2265 2329 1.971167 GCACACAAATGAGCCGGGA 60.971 57.895 2.18 0.00 36.51 5.14
2266 2330 1.804396 TTGCACACAAATGAGCCGGG 61.804 55.000 2.18 0.00 41.32 5.73
2267 2331 0.031857 TTTGCACACAAATGAGCCGG 59.968 50.000 0.00 0.00 40.84 6.13
2268 2332 1.411394 CTTTGCACACAAATGAGCCG 58.589 50.000 0.00 0.00 44.54 5.52
2269 2333 1.142474 GCTTTGCACACAAATGAGCC 58.858 50.000 0.00 0.00 44.54 4.70
2270 2334 0.780002 CGCTTTGCACACAAATGAGC 59.220 50.000 0.00 0.00 44.54 4.26
2271 2335 1.782569 CACGCTTTGCACACAAATGAG 59.217 47.619 0.00 0.00 44.54 2.90
2272 2336 1.837648 CACGCTTTGCACACAAATGA 58.162 45.000 0.00 0.00 44.54 2.57
2299 2363 4.081087 AGCCAACTATCGGTCACATTAAGT 60.081 41.667 0.00 0.00 0.00 2.24
2300 2364 4.442706 AGCCAACTATCGGTCACATTAAG 58.557 43.478 0.00 0.00 0.00 1.85
2301 2365 4.481368 AGCCAACTATCGGTCACATTAA 57.519 40.909 0.00 0.00 0.00 1.40
2302 2366 4.081365 TCAAGCCAACTATCGGTCACATTA 60.081 41.667 0.00 0.00 0.00 1.90
2303 2367 3.009723 CAAGCCAACTATCGGTCACATT 58.990 45.455 0.00 0.00 0.00 2.71
2304 2368 2.236146 TCAAGCCAACTATCGGTCACAT 59.764 45.455 0.00 0.00 0.00 3.21
2305 2369 1.621317 TCAAGCCAACTATCGGTCACA 59.379 47.619 0.00 0.00 0.00 3.58
2306 2370 2.000447 GTCAAGCCAACTATCGGTCAC 59.000 52.381 0.00 0.00 0.00 3.67
2307 2371 1.621317 TGTCAAGCCAACTATCGGTCA 59.379 47.619 0.00 0.00 0.00 4.02
2308 2372 2.380084 TGTCAAGCCAACTATCGGTC 57.620 50.000 0.00 0.00 0.00 4.79
2309 2373 2.301870 TCTTGTCAAGCCAACTATCGGT 59.698 45.455 7.78 0.00 0.00 4.69
2310 2374 2.673368 GTCTTGTCAAGCCAACTATCGG 59.327 50.000 7.78 0.00 0.00 4.18
2311 2375 2.673368 GGTCTTGTCAAGCCAACTATCG 59.327 50.000 16.57 0.00 0.00 2.92
2312 2376 3.010420 GGGTCTTGTCAAGCCAACTATC 58.990 50.000 20.61 1.25 34.37 2.08
2313 2377 2.290960 GGGGTCTTGTCAAGCCAACTAT 60.291 50.000 20.61 0.00 35.96 2.12
2314 2378 1.073284 GGGGTCTTGTCAAGCCAACTA 59.927 52.381 20.61 0.00 35.96 2.24
2315 2379 0.178990 GGGGTCTTGTCAAGCCAACT 60.179 55.000 20.61 0.00 35.96 3.16
2316 2380 0.178990 AGGGGTCTTGTCAAGCCAAC 60.179 55.000 20.61 14.95 35.96 3.77
2317 2381 0.178992 CAGGGGTCTTGTCAAGCCAA 60.179 55.000 20.61 0.00 35.96 4.52
2318 2382 1.455849 CAGGGGTCTTGTCAAGCCA 59.544 57.895 20.61 0.24 35.96 4.75
2319 2383 1.303643 CCAGGGGTCTTGTCAAGCC 60.304 63.158 7.78 11.70 0.00 4.35
2320 2384 1.973812 GCCAGGGGTCTTGTCAAGC 60.974 63.158 7.78 3.38 0.00 4.01
2321 2385 0.111253 AAGCCAGGGGTCTTGTCAAG 59.889 55.000 6.21 6.21 0.00 3.02
2322 2386 0.110486 GAAGCCAGGGGTCTTGTCAA 59.890 55.000 0.00 0.00 0.00 3.18
2323 2387 0.768221 AGAAGCCAGGGGTCTTGTCA 60.768 55.000 0.00 0.00 0.00 3.58
2324 2388 0.402121 AAGAAGCCAGGGGTCTTGTC 59.598 55.000 0.00 0.00 0.00 3.18
2325 2389 0.111253 CAAGAAGCCAGGGGTCTTGT 59.889 55.000 15.43 2.91 34.71 3.16
2326 2390 0.610232 CCAAGAAGCCAGGGGTCTTG 60.610 60.000 16.15 16.15 37.94 3.02
2327 2391 1.068352 ACCAAGAAGCCAGGGGTCTT 61.068 55.000 0.00 0.00 0.00 3.01
2328 2392 1.464198 ACCAAGAAGCCAGGGGTCT 60.464 57.895 0.00 0.00 0.00 3.85
2329 2393 1.303643 CACCAAGAAGCCAGGGGTC 60.304 63.158 0.00 0.00 0.00 4.46
2330 2394 2.069165 GACACCAAGAAGCCAGGGGT 62.069 60.000 0.00 0.00 42.99 4.95
2331 2395 1.303643 GACACCAAGAAGCCAGGGG 60.304 63.158 0.00 0.00 0.00 4.79
2332 2396 1.303643 GGACACCAAGAAGCCAGGG 60.304 63.158 0.00 0.00 0.00 4.45
2333 2397 0.607489 CTGGACACCAAGAAGCCAGG 60.607 60.000 0.00 0.00 41.81 4.45
2334 2398 1.239968 GCTGGACACCAAGAAGCCAG 61.240 60.000 0.00 0.00 46.82 4.85
2335 2399 1.228245 GCTGGACACCAAGAAGCCA 60.228 57.895 0.00 0.00 30.80 4.75
2336 2400 1.973812 GGCTGGACACCAAGAAGCC 60.974 63.158 0.00 0.00 34.76 4.35
2337 2401 0.538287 AAGGCTGGACACCAAGAAGC 60.538 55.000 0.00 0.00 30.80 3.86
2338 2402 1.072965 AGAAGGCTGGACACCAAGAAG 59.927 52.381 0.00 0.00 30.80 2.85
2339 2403 1.140312 AGAAGGCTGGACACCAAGAA 58.860 50.000 0.00 0.00 30.80 2.52
2340 2404 0.397941 CAGAAGGCTGGACACCAAGA 59.602 55.000 0.00 0.00 38.51 3.02
2341 2405 2.938354 CAGAAGGCTGGACACCAAG 58.062 57.895 0.00 0.00 38.51 3.61
2353 2417 2.205022 TGGAACAATCAGCCAGAAGG 57.795 50.000 0.00 0.00 31.92 3.46
2366 2430 6.647334 TTGAGTAAATGCATTCTTGGAACA 57.353 33.333 13.38 4.70 0.00 3.18
2367 2431 9.638239 TTTATTGAGTAAATGCATTCTTGGAAC 57.362 29.630 13.38 4.88 0.00 3.62
2368 2432 9.859427 CTTTATTGAGTAAATGCATTCTTGGAA 57.141 29.630 13.38 4.16 32.12 3.53
2369 2433 7.975616 GCTTTATTGAGTAAATGCATTCTTGGA 59.024 33.333 13.38 0.00 32.12 3.53
2370 2434 7.977853 AGCTTTATTGAGTAAATGCATTCTTGG 59.022 33.333 13.38 0.00 33.07 3.61
2371 2435 8.922058 AGCTTTATTGAGTAAATGCATTCTTG 57.078 30.769 13.38 0.00 33.07 3.02
2372 2436 8.964772 AGAGCTTTATTGAGTAAATGCATTCTT 58.035 29.630 13.38 0.00 33.07 2.52
2373 2437 8.517062 AGAGCTTTATTGAGTAAATGCATTCT 57.483 30.769 13.38 6.36 33.07 2.40
2374 2438 8.619546 AGAGAGCTTTATTGAGTAAATGCATTC 58.380 33.333 13.38 0.67 33.07 2.67
2375 2439 8.404000 CAGAGAGCTTTATTGAGTAAATGCATT 58.596 33.333 5.99 5.99 33.07 3.56
2376 2440 7.772292 TCAGAGAGCTTTATTGAGTAAATGCAT 59.228 33.333 0.00 0.00 33.07 3.96
2377 2441 7.105588 TCAGAGAGCTTTATTGAGTAAATGCA 58.894 34.615 0.00 0.00 33.07 3.96
2378 2442 7.545362 TCAGAGAGCTTTATTGAGTAAATGC 57.455 36.000 0.00 0.00 32.12 3.56
2382 2446 9.167311 GGAAATTCAGAGAGCTTTATTGAGTAA 57.833 33.333 0.00 0.00 0.00 2.24
2383 2447 7.770897 GGGAAATTCAGAGAGCTTTATTGAGTA 59.229 37.037 0.00 0.00 0.00 2.59
2384 2448 6.601217 GGGAAATTCAGAGAGCTTTATTGAGT 59.399 38.462 0.00 0.00 0.00 3.41
2385 2449 6.039159 GGGGAAATTCAGAGAGCTTTATTGAG 59.961 42.308 0.00 0.00 0.00 3.02
2386 2450 5.888161 GGGGAAATTCAGAGAGCTTTATTGA 59.112 40.000 0.00 0.00 0.00 2.57
2387 2451 5.220931 CGGGGAAATTCAGAGAGCTTTATTG 60.221 44.000 0.00 0.00 0.00 1.90
2388 2452 4.884164 CGGGGAAATTCAGAGAGCTTTATT 59.116 41.667 0.00 0.00 0.00 1.40
2389 2453 4.455606 CGGGGAAATTCAGAGAGCTTTAT 58.544 43.478 0.00 0.00 0.00 1.40
2390 2454 3.873910 CGGGGAAATTCAGAGAGCTTTA 58.126 45.455 0.00 0.00 0.00 1.85
2391 2455 2.716217 CGGGGAAATTCAGAGAGCTTT 58.284 47.619 0.00 0.00 0.00 3.51
2392 2456 1.680249 GCGGGGAAATTCAGAGAGCTT 60.680 52.381 0.00 0.00 0.00 3.74
2393 2457 0.107459 GCGGGGAAATTCAGAGAGCT 60.107 55.000 0.00 0.00 0.00 4.09
2394 2458 0.392998 TGCGGGGAAATTCAGAGAGC 60.393 55.000 0.00 0.00 0.00 4.09
2395 2459 2.113860 TTGCGGGGAAATTCAGAGAG 57.886 50.000 0.00 0.00 0.00 3.20
2396 2460 2.577606 TTTGCGGGGAAATTCAGAGA 57.422 45.000 0.00 0.00 0.00 3.10
2397 2461 3.658757 TTTTTGCGGGGAAATTCAGAG 57.341 42.857 0.00 0.00 0.00 3.35
2421 2485 9.924650 AGAATAGTGTTGTACTAAGAATCGTTT 57.075 29.630 0.00 0.00 44.64 3.60
2422 2486 9.924650 AAGAATAGTGTTGTACTAAGAATCGTT 57.075 29.630 0.00 0.00 44.64 3.85
2423 2487 9.924650 AAAGAATAGTGTTGTACTAAGAATCGT 57.075 29.630 0.00 0.00 44.64 3.73
2427 2491 9.706691 CCAGAAAGAATAGTGTTGTACTAAGAA 57.293 33.333 0.00 0.00 44.64 2.52
2428 2492 7.817962 GCCAGAAAGAATAGTGTTGTACTAAGA 59.182 37.037 0.00 0.00 44.64 2.10
2429 2493 7.602644 TGCCAGAAAGAATAGTGTTGTACTAAG 59.397 37.037 0.00 0.00 44.64 2.18
2430 2494 7.446769 TGCCAGAAAGAATAGTGTTGTACTAA 58.553 34.615 0.00 0.00 44.64 2.24
2431 2495 6.999950 TGCCAGAAAGAATAGTGTTGTACTA 58.000 36.000 0.00 0.00 45.50 1.82
2432 2496 5.865085 TGCCAGAAAGAATAGTGTTGTACT 58.135 37.500 0.00 0.00 43.56 2.73
2433 2497 6.371389 GTTGCCAGAAAGAATAGTGTTGTAC 58.629 40.000 0.00 0.00 0.00 2.90
2434 2498 5.472137 GGTTGCCAGAAAGAATAGTGTTGTA 59.528 40.000 0.00 0.00 0.00 2.41
2435 2499 4.278419 GGTTGCCAGAAAGAATAGTGTTGT 59.722 41.667 0.00 0.00 0.00 3.32
2436 2500 4.613622 CGGTTGCCAGAAAGAATAGTGTTG 60.614 45.833 0.00 0.00 0.00 3.33
2437 2501 3.502211 CGGTTGCCAGAAAGAATAGTGTT 59.498 43.478 0.00 0.00 0.00 3.32
2438 2502 3.074412 CGGTTGCCAGAAAGAATAGTGT 58.926 45.455 0.00 0.00 0.00 3.55
2439 2503 2.420022 CCGGTTGCCAGAAAGAATAGTG 59.580 50.000 0.00 0.00 0.00 2.74
2440 2504 2.304761 TCCGGTTGCCAGAAAGAATAGT 59.695 45.455 0.00 0.00 0.00 2.12
2441 2505 2.985896 TCCGGTTGCCAGAAAGAATAG 58.014 47.619 0.00 0.00 0.00 1.73


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.