Multiple sequence alignment - TraesCS2B01G336800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G336800 chr2B 100.000 6871 0 0 1 6871 481047720 481054590 0.000000e+00 12689.0
1 TraesCS2B01G336800 chr2B 92.982 399 27 1 1 399 480941838 480942235 1.280000e-161 580.0
2 TraesCS2B01G336800 chr2B 87.229 415 46 7 4224 4636 764068877 764068468 3.750000e-127 466.0
3 TraesCS2B01G336800 chr2D 94.037 5685 230 46 1251 6871 405416315 405421954 0.000000e+00 8519.0
4 TraesCS2B01G336800 chr2D 91.849 822 42 11 441 1249 405415377 405416186 0.000000e+00 1123.0
5 TraesCS2B01G336800 chr2D 100.000 46 0 0 1330 1375 405416368 405416413 1.230000e-12 86.1
6 TraesCS2B01G336800 chr2D 88.000 50 6 0 6476 6525 595480683 595480634 7.440000e-05 60.2
7 TraesCS2B01G336800 chr2A 86.432 1673 131 33 1643 3264 543621068 543622695 0.000000e+00 1744.0
8 TraesCS2B01G336800 chr2A 83.538 1871 233 39 5040 6871 543624645 543626479 0.000000e+00 1679.0
9 TraesCS2B01G336800 chr2A 84.277 1183 128 30 3302 4451 543622970 543624127 0.000000e+00 1101.0
10 TraesCS2B01G336800 chr2A 90.898 824 47 10 440 1249 543619601 543620410 0.000000e+00 1081.0
11 TraesCS2B01G336800 chr2A 82.341 504 55 20 4512 4998 543624159 543624645 2.310000e-109 407.0
12 TraesCS2B01G336800 chr2A 91.124 169 8 4 1496 1658 543620596 543620763 8.970000e-54 222.0
13 TraesCS2B01G336800 chr2A 90.667 75 4 3 1369 1442 543620523 543620595 5.670000e-16 97.1
14 TraesCS2B01G336800 chr3D 90.104 384 35 3 5 388 544832754 544832374 4.790000e-136 496.0
15 TraesCS2B01G336800 chr3D 89.894 376 36 2 24 399 544893078 544892705 3.730000e-132 483.0
16 TraesCS2B01G336800 chr3D 89.362 47 5 0 6476 6522 482215403 482215449 7.440000e-05 60.2
17 TraesCS2B01G336800 chr7B 88.131 396 45 2 5 400 256213256 256212863 2.900000e-128 470.0
18 TraesCS2B01G336800 chr7B 87.817 394 45 3 1 392 306259723 306260115 6.280000e-125 459.0
19 TraesCS2B01G336800 chr7B 86.224 392 53 1 1 392 216398604 216398214 2.290000e-114 424.0
20 TraesCS2B01G336800 chr7B 83.372 433 53 13 4228 4651 121501910 121502332 3.890000e-102 383.0
21 TraesCS2B01G336800 chr7B 82.824 425 53 10 4254 4675 643377653 643377246 5.070000e-96 363.0
22 TraesCS2B01G336800 chr7B 79.570 93 18 1 2094 2186 121390728 121390637 1.600000e-06 65.8
23 TraesCS2B01G336800 chr1B 87.437 398 47 3 2 399 363698321 363698715 8.120000e-124 455.0
24 TraesCS2B01G336800 chr1B 87.500 56 7 0 6476 6531 643592900 643592955 1.600000e-06 65.8
25 TraesCS2B01G336800 chr3B 87.056 394 46 3 1 394 102875939 102876327 2.270000e-119 440.0
26 TraesCS2B01G336800 chr3B 77.876 113 19 6 6485 6594 217143373 217143264 1.600000e-06 65.8
27 TraesCS2B01G336800 chr6B 86.216 399 53 2 1 399 485591365 485590969 1.370000e-116 431.0
28 TraesCS2B01G336800 chr6B 72.429 457 92 24 1719 2158 693047839 693048278 1.570000e-21 115.0
29 TraesCS2B01G336800 chr6B 77.982 109 18 6 6489 6594 223433622 223433517 5.750000e-06 63.9
30 TraesCS2B01G336800 chr7D 84.101 434 56 11 4228 4653 160489605 160490033 2.310000e-109 407.0
31 TraesCS2B01G336800 chr5B 82.571 459 61 16 4225 4676 678488855 678489301 3.010000e-103 387.0
32 TraesCS2B01G336800 chr5A 84.197 386 50 6 4241 4625 76964674 76964299 1.410000e-96 364.0
33 TraesCS2B01G336800 chr1D 83.047 407 56 12 4227 4630 25816632 25817028 2.360000e-94 357.0
34 TraesCS2B01G336800 chr7A 75.767 326 56 12 2101 2419 255918885 255919194 7.180000e-30 143.0
35 TraesCS2B01G336800 chr7A 88.000 50 6 0 6476 6525 645059065 645059016 7.440000e-05 60.2
36 TraesCS2B01G336800 chr4D 77.368 190 29 12 1817 1998 4822222 4822039 4.390000e-17 100.0
37 TraesCS2B01G336800 chr4D 76.852 108 21 4 6489 6594 439661899 439662004 2.680000e-04 58.4
38 TraesCS2B01G336800 chr1A 73.077 260 53 13 1747 1998 94111601 94111351 7.390000e-10 76.8
39 TraesCS2B01G336800 chr4B 77.876 113 19 6 6485 6594 385556322 385556213 1.600000e-06 65.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G336800 chr2B 481047720 481054590 6870 False 12689.000000 12689 100.000000 1 6871 1 chr2B.!!$F2 6870
1 TraesCS2B01G336800 chr2D 405415377 405421954 6577 False 4821.000000 8519 92.943000 441 6871 2 chr2D.!!$F2 6430
2 TraesCS2B01G336800 chr2A 543619601 543626479 6878 False 904.442857 1744 87.039571 440 6871 7 chr2A.!!$F1 6431

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
276 277 0.101219 GGGCCTTCAATAAGCTTGCG 59.899 55.0 9.86 0.0 0.0 4.85 F
323 324 0.110104 CCTCATTGGGCCTCCTCATC 59.890 60.0 4.53 0.0 0.0 2.92 F
2041 2588 0.178921 TCACCTCAGCTTCCCACTCT 60.179 55.0 0.00 0.0 0.0 3.24 F
2655 3213 1.165270 ATTACTGCAGTTGGTTCCGC 58.835 50.0 27.06 0.0 0.0 5.54 F
4302 5159 0.240678 TGCATCAAAGTTCGCGCAAT 59.759 45.0 8.75 0.0 0.0 3.56 F
5012 5890 1.327690 TGTAGCCTACTCTTGCCCGG 61.328 60.0 3.13 0.0 0.0 5.73 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2041 2588 0.887387 AAAAACTAAGCGGGCGAGCA 60.887 50.0 6.37 0.0 40.15 4.26 R
2585 3142 5.221722 GGAATGACCTTGCATAGTAGGATGA 60.222 44.0 9.19 0.0 35.45 2.92 R
3946 4797 1.264749 TAACACCGGCCTCTGCATCT 61.265 55.0 0.00 0.0 40.13 2.90 R
4605 5468 0.928451 GTTTGCGTCAAGGTTCGTGC 60.928 55.0 0.00 0.0 0.00 5.34 R
5528 6427 0.831307 GTGATCTGGTAGGTGGGTCC 59.169 60.0 0.00 0.0 0.00 4.46 R
5957 6860 1.232119 CAAGCCTGCATGCATCGATA 58.768 50.0 22.97 0.0 0.00 2.92 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
22 23 5.627499 CTGCTTTAGGTTGTATTGCTTGA 57.373 39.130 0.00 0.00 0.00 3.02
23 24 5.627499 TGCTTTAGGTTGTATTGCTTGAG 57.373 39.130 0.00 0.00 0.00 3.02
24 25 5.070001 TGCTTTAGGTTGTATTGCTTGAGT 58.930 37.500 0.00 0.00 0.00 3.41
25 26 5.534654 TGCTTTAGGTTGTATTGCTTGAGTT 59.465 36.000 0.00 0.00 0.00 3.01
26 27 6.040391 TGCTTTAGGTTGTATTGCTTGAGTTT 59.960 34.615 0.00 0.00 0.00 2.66
27 28 6.582672 GCTTTAGGTTGTATTGCTTGAGTTTC 59.417 38.462 0.00 0.00 0.00 2.78
28 29 4.749245 AGGTTGTATTGCTTGAGTTTCG 57.251 40.909 0.00 0.00 0.00 3.46
29 30 4.385825 AGGTTGTATTGCTTGAGTTTCGA 58.614 39.130 0.00 0.00 0.00 3.71
30 31 5.003804 AGGTTGTATTGCTTGAGTTTCGAT 58.996 37.500 0.00 0.00 0.00 3.59
31 32 5.473504 AGGTTGTATTGCTTGAGTTTCGATT 59.526 36.000 0.00 0.00 0.00 3.34
32 33 6.653320 AGGTTGTATTGCTTGAGTTTCGATTA 59.347 34.615 0.00 0.00 0.00 1.75
33 34 6.741358 GGTTGTATTGCTTGAGTTTCGATTAC 59.259 38.462 0.00 0.00 0.00 1.89
34 35 6.417191 TGTATTGCTTGAGTTTCGATTACC 57.583 37.500 0.00 0.00 0.00 2.85
35 36 5.935206 TGTATTGCTTGAGTTTCGATTACCA 59.065 36.000 0.00 0.00 0.00 3.25
36 37 5.551760 ATTGCTTGAGTTTCGATTACCAG 57.448 39.130 0.00 0.00 0.00 4.00
37 38 3.334691 TGCTTGAGTTTCGATTACCAGG 58.665 45.455 0.00 0.00 0.00 4.45
38 39 3.244422 TGCTTGAGTTTCGATTACCAGGT 60.244 43.478 0.00 0.00 0.00 4.00
39 40 4.020928 TGCTTGAGTTTCGATTACCAGGTA 60.021 41.667 0.00 0.00 0.00 3.08
40 41 4.567159 GCTTGAGTTTCGATTACCAGGTAG 59.433 45.833 0.00 0.00 0.00 3.18
41 42 4.119442 TGAGTTTCGATTACCAGGTAGC 57.881 45.455 0.00 0.00 0.00 3.58
42 43 3.114065 GAGTTTCGATTACCAGGTAGCG 58.886 50.000 14.65 14.65 0.00 4.26
43 44 2.756760 AGTTTCGATTACCAGGTAGCGA 59.243 45.455 17.91 17.91 0.00 4.93
44 45 3.194116 AGTTTCGATTACCAGGTAGCGAA 59.806 43.478 24.47 24.47 36.06 4.70
45 46 4.117685 GTTTCGATTACCAGGTAGCGAAT 58.882 43.478 26.85 11.33 36.93 3.34
46 47 5.068198 AGTTTCGATTACCAGGTAGCGAATA 59.932 40.000 26.85 19.07 36.93 1.75
47 48 4.494350 TCGATTACCAGGTAGCGAATAC 57.506 45.455 18.98 0.00 0.00 1.89
48 49 3.058708 TCGATTACCAGGTAGCGAATACG 60.059 47.826 18.98 9.72 42.93 3.06
59 60 3.877801 CGAATACGCTTGACCTTGC 57.122 52.632 0.00 0.00 0.00 4.01
60 61 1.359848 CGAATACGCTTGACCTTGCT 58.640 50.000 0.00 0.00 0.00 3.91
61 62 1.732259 CGAATACGCTTGACCTTGCTT 59.268 47.619 0.00 0.00 0.00 3.91
62 63 2.159627 CGAATACGCTTGACCTTGCTTT 59.840 45.455 0.00 0.00 0.00 3.51
63 64 3.364964 CGAATACGCTTGACCTTGCTTTT 60.365 43.478 0.00 0.00 0.00 2.27
64 65 3.559238 ATACGCTTGACCTTGCTTTTG 57.441 42.857 0.00 0.00 0.00 2.44
65 66 1.388547 ACGCTTGACCTTGCTTTTGA 58.611 45.000 0.00 0.00 0.00 2.69
66 67 1.956477 ACGCTTGACCTTGCTTTTGAT 59.044 42.857 0.00 0.00 0.00 2.57
67 68 2.362077 ACGCTTGACCTTGCTTTTGATT 59.638 40.909 0.00 0.00 0.00 2.57
68 69 2.727798 CGCTTGACCTTGCTTTTGATTG 59.272 45.455 0.00 0.00 0.00 2.67
69 70 2.477754 GCTTGACCTTGCTTTTGATTGC 59.522 45.455 0.00 0.00 0.00 3.56
70 71 3.801293 GCTTGACCTTGCTTTTGATTGCT 60.801 43.478 0.00 0.00 0.00 3.91
71 72 4.374399 CTTGACCTTGCTTTTGATTGCTT 58.626 39.130 0.00 0.00 0.00 3.91
72 73 3.719924 TGACCTTGCTTTTGATTGCTTG 58.280 40.909 0.00 0.00 0.00 4.01
73 74 3.132646 TGACCTTGCTTTTGATTGCTTGT 59.867 39.130 0.00 0.00 0.00 3.16
74 75 4.122046 GACCTTGCTTTTGATTGCTTGTT 58.878 39.130 0.00 0.00 0.00 2.83
75 76 4.516323 ACCTTGCTTTTGATTGCTTGTTT 58.484 34.783 0.00 0.00 0.00 2.83
76 77 4.571984 ACCTTGCTTTTGATTGCTTGTTTC 59.428 37.500 0.00 0.00 0.00 2.78
77 78 4.812626 CCTTGCTTTTGATTGCTTGTTTCT 59.187 37.500 0.00 0.00 0.00 2.52
78 79 5.295045 CCTTGCTTTTGATTGCTTGTTTCTT 59.705 36.000 0.00 0.00 0.00 2.52
79 80 5.721876 TGCTTTTGATTGCTTGTTTCTTG 57.278 34.783 0.00 0.00 0.00 3.02
80 81 4.034279 TGCTTTTGATTGCTTGTTTCTTGC 59.966 37.500 0.00 0.00 0.00 4.01
81 82 4.553351 GCTTTTGATTGCTTGTTTCTTGCC 60.553 41.667 0.00 0.00 0.00 4.52
82 83 4.405116 TTTGATTGCTTGTTTCTTGCCT 57.595 36.364 0.00 0.00 0.00 4.75
83 84 4.405116 TTGATTGCTTGTTTCTTGCCTT 57.595 36.364 0.00 0.00 0.00 4.35
84 85 5.528043 TTGATTGCTTGTTTCTTGCCTTA 57.472 34.783 0.00 0.00 0.00 2.69
85 86 5.528043 TGATTGCTTGTTTCTTGCCTTAA 57.472 34.783 0.00 0.00 0.00 1.85
86 87 5.288804 TGATTGCTTGTTTCTTGCCTTAAC 58.711 37.500 0.00 0.00 0.00 2.01
87 88 3.726291 TGCTTGTTTCTTGCCTTAACC 57.274 42.857 0.00 0.00 0.00 2.85
88 89 2.364002 TGCTTGTTTCTTGCCTTAACCC 59.636 45.455 0.00 0.00 0.00 4.11
89 90 2.607038 GCTTGTTTCTTGCCTTAACCCG 60.607 50.000 0.00 0.00 0.00 5.28
90 91 0.955905 TGTTTCTTGCCTTAACCCGC 59.044 50.000 0.00 0.00 0.00 6.13
91 92 0.242825 GTTTCTTGCCTTAACCCGCC 59.757 55.000 0.00 0.00 0.00 6.13
92 93 1.238625 TTTCTTGCCTTAACCCGCCG 61.239 55.000 0.00 0.00 0.00 6.46
93 94 3.810896 CTTGCCTTAACCCGCCGC 61.811 66.667 0.00 0.00 0.00 6.53
118 119 5.641789 GGTCACCCCTTTATATACAGGTT 57.358 43.478 12.88 0.00 0.00 3.50
119 120 5.374071 GGTCACCCCTTTATATACAGGTTG 58.626 45.833 12.88 9.76 0.00 3.77
120 121 5.131475 GGTCACCCCTTTATATACAGGTTGA 59.869 44.000 12.88 11.53 0.00 3.18
121 122 6.183361 GGTCACCCCTTTATATACAGGTTGAT 60.183 42.308 12.88 0.00 0.00 2.57
122 123 6.710744 GTCACCCCTTTATATACAGGTTGATG 59.289 42.308 12.88 6.46 0.00 3.07
123 124 6.388689 TCACCCCTTTATATACAGGTTGATGT 59.611 38.462 12.88 1.45 37.19 3.06
124 125 6.710744 CACCCCTTTATATACAGGTTGATGTC 59.289 42.308 12.88 0.00 34.56 3.06
125 126 6.183361 ACCCCTTTATATACAGGTTGATGTCC 60.183 42.308 12.88 0.00 34.56 4.02
126 127 6.044404 CCCCTTTATATACAGGTTGATGTCCT 59.956 42.308 12.88 0.00 34.56 3.85
127 128 7.162082 CCCTTTATATACAGGTTGATGTCCTC 58.838 42.308 12.88 0.00 34.56 3.71
128 129 6.868864 CCTTTATATACAGGTTGATGTCCTCG 59.131 42.308 6.76 0.00 34.56 4.63
129 130 4.873746 ATATACAGGTTGATGTCCTCGG 57.126 45.455 0.00 0.00 34.56 4.63
130 131 1.933021 TACAGGTTGATGTCCTCGGT 58.067 50.000 0.00 0.00 34.56 4.69
131 132 0.321671 ACAGGTTGATGTCCTCGGTG 59.678 55.000 0.00 0.00 32.37 4.94
132 133 0.391661 CAGGTTGATGTCCTCGGTGG 60.392 60.000 0.00 0.00 32.37 4.61
133 134 1.745489 GGTTGATGTCCTCGGTGGC 60.745 63.158 0.00 0.00 35.26 5.01
134 135 1.296715 GTTGATGTCCTCGGTGGCT 59.703 57.895 0.00 0.00 35.26 4.75
135 136 0.321653 GTTGATGTCCTCGGTGGCTT 60.322 55.000 0.00 0.00 35.26 4.35
136 137 1.066430 GTTGATGTCCTCGGTGGCTTA 60.066 52.381 0.00 0.00 35.26 3.09
137 138 0.535335 TGATGTCCTCGGTGGCTTAC 59.465 55.000 0.00 0.00 35.26 2.34
138 139 0.535335 GATGTCCTCGGTGGCTTACA 59.465 55.000 0.00 0.00 35.26 2.41
139 140 0.537188 ATGTCCTCGGTGGCTTACAG 59.463 55.000 0.00 0.00 35.26 2.74
140 141 0.541063 TGTCCTCGGTGGCTTACAGA 60.541 55.000 0.00 0.00 35.26 3.41
141 142 0.173708 GTCCTCGGTGGCTTACAGAG 59.826 60.000 12.28 12.28 46.95 3.35
142 143 0.251653 TCCTCGGTGGCTTACAGAGT 60.252 55.000 15.87 0.00 46.27 3.24
143 144 0.173708 CCTCGGTGGCTTACAGAGTC 59.826 60.000 15.87 0.00 46.27 3.36
144 145 0.888619 CTCGGTGGCTTACAGAGTCA 59.111 55.000 11.45 0.00 43.79 3.41
148 149 1.292223 TGGCTTACAGAGTCACGGC 59.708 57.895 0.00 0.00 34.36 5.68
149 150 1.448013 GGCTTACAGAGTCACGGCC 60.448 63.158 0.00 0.00 0.00 6.13
150 151 1.805945 GCTTACAGAGTCACGGCCG 60.806 63.158 26.86 26.86 0.00 6.13
151 152 1.153823 CTTACAGAGTCACGGCCGG 60.154 63.158 31.76 18.67 0.00 6.13
152 153 3.291101 TTACAGAGTCACGGCCGGC 62.291 63.158 31.76 21.18 0.00 6.13
154 155 4.803426 CAGAGTCACGGCCGGCTC 62.803 72.222 31.76 29.29 0.00 4.70
158 159 4.760047 GTCACGGCCGGCTCACAT 62.760 66.667 31.76 2.42 0.00 3.21
159 160 3.071837 TCACGGCCGGCTCACATA 61.072 61.111 31.76 4.40 0.00 2.29
160 161 2.125310 CACGGCCGGCTCACATAA 60.125 61.111 31.76 0.00 0.00 1.90
161 162 1.743623 CACGGCCGGCTCACATAAA 60.744 57.895 31.76 0.00 0.00 1.40
162 163 1.743995 ACGGCCGGCTCACATAAAC 60.744 57.895 31.76 4.75 0.00 2.01
163 164 2.808958 CGGCCGGCTCACATAAACG 61.809 63.158 28.56 14.21 0.00 3.60
164 165 2.403586 GCCGGCTCACATAAACGC 59.596 61.111 22.15 0.00 0.00 4.84
165 166 2.701006 CCGGCTCACATAAACGCG 59.299 61.111 3.53 3.53 0.00 6.01
166 167 1.807981 CCGGCTCACATAAACGCGA 60.808 57.895 15.93 0.00 0.00 5.87
167 168 1.343821 CGGCTCACATAAACGCGAC 59.656 57.895 15.93 0.00 0.00 5.19
168 169 1.713830 GGCTCACATAAACGCGACC 59.286 57.895 15.93 0.00 0.00 4.79
169 170 1.343821 GCTCACATAAACGCGACCG 59.656 57.895 15.93 0.00 41.14 4.79
170 171 1.995991 CTCACATAAACGCGACCGG 59.004 57.895 15.93 0.00 39.22 5.28
171 172 2.020836 CTCACATAAACGCGACCGGC 62.021 60.000 15.93 0.00 39.22 6.13
172 173 2.098233 CACATAAACGCGACCGGCT 61.098 57.895 15.93 0.00 40.44 5.52
173 174 1.808390 ACATAAACGCGACCGGCTC 60.808 57.895 15.93 0.00 40.44 4.70
174 175 2.581409 ATAAACGCGACCGGCTCG 60.581 61.111 15.93 18.30 45.97 5.03
186 187 2.660189 CCGGCTCGGTTTCTAACTAA 57.340 50.000 5.56 0.00 42.73 2.24
187 188 2.963432 CCGGCTCGGTTTCTAACTAAA 58.037 47.619 5.56 0.00 42.73 1.85
188 189 2.669924 CCGGCTCGGTTTCTAACTAAAC 59.330 50.000 5.56 0.00 42.73 2.01
199 200 7.886405 GTTTCTAACTAAACCTACCTCACAG 57.114 40.000 0.00 0.00 34.02 3.66
200 201 7.664758 GTTTCTAACTAAACCTACCTCACAGA 58.335 38.462 0.00 0.00 34.02 3.41
201 202 7.844493 TTCTAACTAAACCTACCTCACAGAA 57.156 36.000 0.00 0.00 0.00 3.02
202 203 7.224522 TCTAACTAAACCTACCTCACAGAAC 57.775 40.000 0.00 0.00 0.00 3.01
203 204 5.881923 AACTAAACCTACCTCACAGAACA 57.118 39.130 0.00 0.00 0.00 3.18
204 205 5.470047 ACTAAACCTACCTCACAGAACAG 57.530 43.478 0.00 0.00 0.00 3.16
205 206 3.771577 AAACCTACCTCACAGAACAGG 57.228 47.619 0.00 0.00 35.69 4.00
206 207 2.400467 ACCTACCTCACAGAACAGGT 57.600 50.000 0.00 0.00 45.50 4.00
207 208 2.690840 ACCTACCTCACAGAACAGGTT 58.309 47.619 0.00 0.00 40.35 3.50
208 209 3.046374 ACCTACCTCACAGAACAGGTTT 58.954 45.455 0.00 0.00 40.35 3.27
209 210 4.228824 ACCTACCTCACAGAACAGGTTTA 58.771 43.478 0.00 0.00 40.35 2.01
210 211 4.657039 ACCTACCTCACAGAACAGGTTTAA 59.343 41.667 0.00 0.00 40.35 1.52
211 212 4.995487 CCTACCTCACAGAACAGGTTTAAC 59.005 45.833 0.00 0.00 40.35 2.01
212 213 4.497291 ACCTCACAGAACAGGTTTAACA 57.503 40.909 0.00 0.00 40.35 2.41
213 214 5.048846 ACCTCACAGAACAGGTTTAACAT 57.951 39.130 0.00 0.00 40.35 2.71
214 215 6.182507 ACCTCACAGAACAGGTTTAACATA 57.817 37.500 0.00 0.00 40.35 2.29
215 216 6.779860 ACCTCACAGAACAGGTTTAACATAT 58.220 36.000 0.00 0.00 40.35 1.78
216 217 6.655003 ACCTCACAGAACAGGTTTAACATATG 59.345 38.462 0.00 0.00 40.35 1.78
217 218 6.878923 CCTCACAGAACAGGTTTAACATATGA 59.121 38.462 10.38 0.00 0.00 2.15
218 219 7.148407 CCTCACAGAACAGGTTTAACATATGAC 60.148 40.741 10.38 0.00 0.00 3.06
219 220 6.367695 TCACAGAACAGGTTTAACATATGACG 59.632 38.462 10.38 0.00 0.00 4.35
220 221 5.642063 ACAGAACAGGTTTAACATATGACGG 59.358 40.000 10.38 0.00 0.00 4.79
221 222 4.634443 AGAACAGGTTTAACATATGACGGC 59.366 41.667 10.38 0.00 0.00 5.68
222 223 4.216411 ACAGGTTTAACATATGACGGCT 57.784 40.909 10.38 0.00 0.00 5.52
223 224 4.189231 ACAGGTTTAACATATGACGGCTC 58.811 43.478 10.38 0.00 0.00 4.70
224 225 4.188462 CAGGTTTAACATATGACGGCTCA 58.812 43.478 10.38 0.00 0.00 4.26
225 226 4.034048 CAGGTTTAACATATGACGGCTCAC 59.966 45.833 10.38 0.00 0.00 3.51
251 252 4.214327 GCCTCGAGCCTTCTCCGG 62.214 72.222 6.99 0.00 35.94 5.14
252 253 3.532155 CCTCGAGCCTTCTCCGGG 61.532 72.222 6.99 0.00 35.94 5.73
253 254 2.756283 CTCGAGCCTTCTCCGGGT 60.756 66.667 0.00 0.00 35.94 5.28
254 255 2.754658 TCGAGCCTTCTCCGGGTC 60.755 66.667 0.00 0.00 45.71 4.46
255 256 2.756283 CGAGCCTTCTCCGGGTCT 60.756 66.667 0.00 0.00 46.70 3.85
256 257 2.352032 CGAGCCTTCTCCGGGTCTT 61.352 63.158 0.00 0.00 46.70 3.01
257 258 1.219393 GAGCCTTCTCCGGGTCTTG 59.781 63.158 0.00 0.00 45.70 3.02
258 259 2.245438 GAGCCTTCTCCGGGTCTTGG 62.245 65.000 0.00 0.00 45.70 3.61
259 260 2.990479 CCTTCTCCGGGTCTTGGG 59.010 66.667 0.00 0.00 0.00 4.12
260 261 2.269241 CTTCTCCGGGTCTTGGGC 59.731 66.667 0.00 0.00 0.00 5.36
261 262 3.327404 TTCTCCGGGTCTTGGGCC 61.327 66.667 0.00 0.00 0.00 5.80
262 263 3.864983 TTCTCCGGGTCTTGGGCCT 62.865 63.158 4.53 0.00 0.00 5.19
263 264 3.330720 CTCCGGGTCTTGGGCCTT 61.331 66.667 4.53 0.00 0.00 4.35
264 265 3.327404 TCCGGGTCTTGGGCCTTC 61.327 66.667 4.53 0.00 0.00 3.46
265 266 3.646715 CCGGGTCTTGGGCCTTCA 61.647 66.667 4.53 0.00 0.00 3.02
266 267 2.434331 CGGGTCTTGGGCCTTCAA 59.566 61.111 4.53 0.00 0.00 2.69
267 268 1.000896 CGGGTCTTGGGCCTTCAAT 60.001 57.895 4.53 0.00 0.00 2.57
268 269 0.254747 CGGGTCTTGGGCCTTCAATA 59.745 55.000 4.53 0.00 0.00 1.90
269 270 1.340600 CGGGTCTTGGGCCTTCAATAA 60.341 52.381 4.53 0.00 0.00 1.40
270 271 2.379005 GGGTCTTGGGCCTTCAATAAG 58.621 52.381 4.53 0.00 0.00 1.73
271 272 1.751351 GGTCTTGGGCCTTCAATAAGC 59.249 52.381 4.53 0.00 0.00 3.09
272 273 2.621668 GGTCTTGGGCCTTCAATAAGCT 60.622 50.000 4.53 0.00 0.00 3.74
273 274 3.092301 GTCTTGGGCCTTCAATAAGCTT 58.908 45.455 4.53 3.48 0.00 3.74
274 275 3.091545 TCTTGGGCCTTCAATAAGCTTG 58.908 45.455 9.86 0.00 0.00 4.01
275 276 1.185315 TGGGCCTTCAATAAGCTTGC 58.815 50.000 9.86 1.18 0.00 4.01
276 277 0.101219 GGGCCTTCAATAAGCTTGCG 59.899 55.000 9.86 0.00 0.00 4.85
277 278 0.526310 GGCCTTCAATAAGCTTGCGC 60.526 55.000 9.86 0.00 0.00 6.09
286 287 3.799753 AGCTTGCGCTATGAACCG 58.200 55.556 9.73 0.00 46.79 4.44
287 288 1.079127 AGCTTGCGCTATGAACCGT 60.079 52.632 9.73 0.00 46.79 4.83
288 289 1.084370 AGCTTGCGCTATGAACCGTC 61.084 55.000 9.73 0.00 46.79 4.79
289 290 1.358725 GCTTGCGCTATGAACCGTCA 61.359 55.000 9.73 0.00 38.41 4.35
290 291 1.290203 CTTGCGCTATGAACCGTCAT 58.710 50.000 9.73 0.00 46.52 3.06
291 292 1.258982 CTTGCGCTATGAACCGTCATC 59.741 52.381 9.73 0.00 43.69 2.92
292 293 0.459899 TGCGCTATGAACCGTCATCT 59.540 50.000 9.73 0.00 43.69 2.90
293 294 0.855349 GCGCTATGAACCGTCATCTG 59.145 55.000 0.00 0.00 43.69 2.90
294 295 1.491670 CGCTATGAACCGTCATCTGG 58.508 55.000 0.00 0.00 43.69 3.86
295 296 1.067060 CGCTATGAACCGTCATCTGGA 59.933 52.381 0.00 0.00 43.69 3.86
296 297 2.288457 CGCTATGAACCGTCATCTGGAT 60.288 50.000 0.00 0.00 43.69 3.41
297 298 3.733337 GCTATGAACCGTCATCTGGATT 58.267 45.455 0.00 0.00 43.69 3.01
298 299 3.743396 GCTATGAACCGTCATCTGGATTC 59.257 47.826 0.00 0.00 43.69 2.52
299 300 2.691409 TGAACCGTCATCTGGATTCC 57.309 50.000 0.00 0.00 0.00 3.01
300 301 2.187958 TGAACCGTCATCTGGATTCCT 58.812 47.619 3.95 0.00 0.00 3.36
301 302 2.093500 TGAACCGTCATCTGGATTCCTG 60.093 50.000 3.95 3.59 0.00 3.86
302 303 0.833287 ACCGTCATCTGGATTCCTGG 59.167 55.000 9.46 0.00 0.00 4.45
303 304 1.123077 CCGTCATCTGGATTCCTGGA 58.877 55.000 9.46 0.00 0.00 3.86
304 305 1.202580 CCGTCATCTGGATTCCTGGAC 60.203 57.143 9.46 8.71 0.00 4.02
305 306 1.202580 CGTCATCTGGATTCCTGGACC 60.203 57.143 9.46 0.00 0.00 4.46
306 307 2.122768 GTCATCTGGATTCCTGGACCT 58.877 52.381 9.46 0.00 0.00 3.85
307 308 2.103941 GTCATCTGGATTCCTGGACCTC 59.896 54.545 9.46 0.00 0.00 3.85
308 309 2.121948 CATCTGGATTCCTGGACCTCA 58.878 52.381 9.46 0.00 0.00 3.86
309 310 2.575921 TCTGGATTCCTGGACCTCAT 57.424 50.000 9.46 0.00 0.00 2.90
310 311 2.850833 TCTGGATTCCTGGACCTCATT 58.149 47.619 9.46 0.00 0.00 2.57
311 312 2.507058 TCTGGATTCCTGGACCTCATTG 59.493 50.000 9.46 0.00 0.00 2.82
312 313 1.565759 TGGATTCCTGGACCTCATTGG 59.434 52.381 3.95 0.00 42.93 3.16
313 314 1.133668 GGATTCCTGGACCTCATTGGG 60.134 57.143 0.00 0.00 41.11 4.12
314 315 0.259938 ATTCCTGGACCTCATTGGGC 59.740 55.000 0.00 0.00 45.48 5.36
319 320 3.746957 GACCTCATTGGGCCTCCT 58.253 61.111 4.53 0.00 38.13 3.69
320 321 1.529309 GACCTCATTGGGCCTCCTC 59.471 63.158 4.53 0.00 38.13 3.71
321 322 1.229951 ACCTCATTGGGCCTCCTCA 60.230 57.895 4.53 0.00 41.11 3.86
322 323 0.625683 ACCTCATTGGGCCTCCTCAT 60.626 55.000 4.53 0.00 41.11 2.90
323 324 0.110104 CCTCATTGGGCCTCCTCATC 59.890 60.000 4.53 0.00 0.00 2.92
324 325 1.138568 CTCATTGGGCCTCCTCATCT 58.861 55.000 4.53 0.00 0.00 2.90
325 326 1.493871 CTCATTGGGCCTCCTCATCTT 59.506 52.381 4.53 0.00 0.00 2.40
326 327 2.707791 CTCATTGGGCCTCCTCATCTTA 59.292 50.000 4.53 0.00 0.00 2.10
327 328 3.122480 TCATTGGGCCTCCTCATCTTAA 58.878 45.455 4.53 0.00 0.00 1.85
328 329 3.137176 TCATTGGGCCTCCTCATCTTAAG 59.863 47.826 4.53 0.00 0.00 1.85
329 330 2.270434 TGGGCCTCCTCATCTTAAGT 57.730 50.000 4.53 0.00 0.00 2.24
330 331 2.119495 TGGGCCTCCTCATCTTAAGTC 58.881 52.381 4.53 0.00 0.00 3.01
331 332 1.069358 GGGCCTCCTCATCTTAAGTCG 59.931 57.143 0.84 0.00 0.00 4.18
332 333 1.757699 GGCCTCCTCATCTTAAGTCGT 59.242 52.381 1.63 0.00 0.00 4.34
333 334 2.223852 GGCCTCCTCATCTTAAGTCGTC 60.224 54.545 1.63 0.00 0.00 4.20
334 335 2.427453 GCCTCCTCATCTTAAGTCGTCA 59.573 50.000 1.63 0.00 0.00 4.35
335 336 3.119101 GCCTCCTCATCTTAAGTCGTCAA 60.119 47.826 1.63 0.00 0.00 3.18
336 337 4.442192 GCCTCCTCATCTTAAGTCGTCAAT 60.442 45.833 1.63 0.00 0.00 2.57
337 338 5.046529 CCTCCTCATCTTAAGTCGTCAATG 58.953 45.833 1.63 0.00 0.00 2.82
338 339 5.011090 TCCTCATCTTAAGTCGTCAATGG 57.989 43.478 1.63 0.00 0.00 3.16
339 340 4.466370 TCCTCATCTTAAGTCGTCAATGGT 59.534 41.667 1.63 0.00 0.00 3.55
340 341 5.655090 TCCTCATCTTAAGTCGTCAATGGTA 59.345 40.000 1.63 0.00 0.00 3.25
341 342 6.323996 TCCTCATCTTAAGTCGTCAATGGTAT 59.676 38.462 1.63 0.00 0.00 2.73
342 343 6.986817 CCTCATCTTAAGTCGTCAATGGTATT 59.013 38.462 1.63 0.00 0.00 1.89
343 344 7.042456 CCTCATCTTAAGTCGTCAATGGTATTG 60.042 40.741 1.63 0.00 0.00 1.90
344 345 6.761242 TCATCTTAAGTCGTCAATGGTATTGG 59.239 38.462 1.63 0.00 0.00 3.16
345 346 4.873827 TCTTAAGTCGTCAATGGTATTGGC 59.126 41.667 1.63 0.00 0.00 4.52
346 347 2.038387 AGTCGTCAATGGTATTGGCC 57.962 50.000 0.00 0.00 0.00 5.36
347 348 1.021968 GTCGTCAATGGTATTGGCCC 58.978 55.000 0.00 0.00 0.00 5.80
348 349 0.462937 TCGTCAATGGTATTGGCCCG 60.463 55.000 0.00 0.00 0.00 6.13
349 350 1.444119 CGTCAATGGTATTGGCCCGG 61.444 60.000 0.00 0.00 0.00 5.73
350 351 1.454847 TCAATGGTATTGGCCCGGC 60.455 57.895 0.00 0.00 0.00 6.13
377 378 4.864334 GCGGGTCATGCCTGGGAG 62.864 72.222 14.42 0.00 43.97 4.30
378 379 4.864334 CGGGTCATGCCTGGGAGC 62.864 72.222 7.01 0.00 40.02 4.70
379 380 3.415087 GGGTCATGCCTGGGAGCT 61.415 66.667 0.00 0.00 37.43 4.09
380 381 2.072487 GGGTCATGCCTGGGAGCTA 61.072 63.158 0.00 0.00 37.43 3.32
381 382 1.422161 GGGTCATGCCTGGGAGCTAT 61.422 60.000 0.00 0.00 37.43 2.97
382 383 1.352083 GGTCATGCCTGGGAGCTATA 58.648 55.000 0.00 0.00 0.00 1.31
383 384 1.912043 GGTCATGCCTGGGAGCTATAT 59.088 52.381 0.00 0.00 0.00 0.86
384 385 2.093235 GGTCATGCCTGGGAGCTATATC 60.093 54.545 0.00 0.00 0.00 1.63
385 386 2.836981 GTCATGCCTGGGAGCTATATCT 59.163 50.000 0.00 0.00 0.00 1.98
386 387 3.102972 TCATGCCTGGGAGCTATATCTC 58.897 50.000 0.00 0.00 0.00 2.75
398 399 4.822026 AGCTATATCTCCAACAATACGCC 58.178 43.478 0.00 0.00 0.00 5.68
399 400 4.283467 AGCTATATCTCCAACAATACGCCA 59.717 41.667 0.00 0.00 0.00 5.69
400 401 5.046304 AGCTATATCTCCAACAATACGCCAT 60.046 40.000 0.00 0.00 0.00 4.40
401 402 5.643777 GCTATATCTCCAACAATACGCCATT 59.356 40.000 0.00 0.00 0.00 3.16
413 414 2.268920 GCCATTGGCGGACTCTCA 59.731 61.111 12.82 0.00 39.62 3.27
414 415 1.377202 GCCATTGGCGGACTCTCAA 60.377 57.895 12.82 0.00 39.62 3.02
415 416 0.960364 GCCATTGGCGGACTCTCAAA 60.960 55.000 12.82 0.00 39.62 2.69
416 417 1.533625 CCATTGGCGGACTCTCAAAA 58.466 50.000 0.00 0.00 0.00 2.44
417 418 1.885887 CCATTGGCGGACTCTCAAAAA 59.114 47.619 0.00 0.00 0.00 1.94
418 419 2.493278 CCATTGGCGGACTCTCAAAAAT 59.507 45.455 0.00 0.00 0.00 1.82
419 420 3.504863 CATTGGCGGACTCTCAAAAATG 58.495 45.455 0.00 0.00 0.00 2.32
420 421 2.559698 TGGCGGACTCTCAAAAATGA 57.440 45.000 0.00 0.00 0.00 2.57
421 422 2.857483 TGGCGGACTCTCAAAAATGAA 58.143 42.857 0.00 0.00 0.00 2.57
422 423 3.218453 TGGCGGACTCTCAAAAATGAAA 58.782 40.909 0.00 0.00 0.00 2.69
423 424 3.634448 TGGCGGACTCTCAAAAATGAAAA 59.366 39.130 0.00 0.00 0.00 2.29
424 425 4.098654 TGGCGGACTCTCAAAAATGAAAAA 59.901 37.500 0.00 0.00 0.00 1.94
425 426 4.444388 GGCGGACTCTCAAAAATGAAAAAC 59.556 41.667 0.00 0.00 0.00 2.43
426 427 5.281727 GCGGACTCTCAAAAATGAAAAACT 58.718 37.500 0.00 0.00 0.00 2.66
427 428 6.435428 GCGGACTCTCAAAAATGAAAAACTA 58.565 36.000 0.00 0.00 0.00 2.24
428 429 6.359883 GCGGACTCTCAAAAATGAAAAACTAC 59.640 38.462 0.00 0.00 0.00 2.73
429 430 7.639945 CGGACTCTCAAAAATGAAAAACTACT 58.360 34.615 0.00 0.00 0.00 2.57
430 431 8.770828 CGGACTCTCAAAAATGAAAAACTACTA 58.229 33.333 0.00 0.00 0.00 1.82
431 432 9.880064 GGACTCTCAAAAATGAAAAACTACTAC 57.120 33.333 0.00 0.00 0.00 2.73
432 433 9.582223 GACTCTCAAAAATGAAAAACTACTACG 57.418 33.333 0.00 0.00 0.00 3.51
433 434 9.106070 ACTCTCAAAAATGAAAAACTACTACGT 57.894 29.630 0.00 0.00 0.00 3.57
524 525 3.186106 CCAATGCATGGCGTCGAA 58.814 55.556 0.00 0.00 43.80 3.71
525 526 1.226379 CCAATGCATGGCGTCGAAC 60.226 57.895 0.00 0.00 43.80 3.95
554 562 2.048127 GGGCGTTGAGAAGCTCGT 60.048 61.111 0.00 0.00 32.35 4.18
562 570 0.827925 TGAGAAGCTCGTGGTGTCCT 60.828 55.000 0.00 0.00 32.35 3.85
607 615 5.488341 TGTCCTTGTTAGACCAATTCTAGC 58.512 41.667 0.00 0.00 38.12 3.42
609 617 5.351740 GTCCTTGTTAGACCAATTCTAGCAC 59.648 44.000 0.00 0.00 45.00 4.40
610 618 5.248477 TCCTTGTTAGACCAATTCTAGCACT 59.752 40.000 0.00 0.00 45.00 4.40
611 619 5.940470 CCTTGTTAGACCAATTCTAGCACTT 59.060 40.000 0.00 0.00 45.00 3.16
628 636 8.289618 TCTAGCACTTCACACAATTAATGTTTC 58.710 33.333 0.00 0.00 41.46 2.78
767 776 2.229784 AGCTGGAAAATGCAAGCTGTAC 59.770 45.455 7.51 0.00 0.00 2.90
780 789 2.046411 TGTACGCATGGCCACCAG 60.046 61.111 8.16 4.28 36.75 4.00
781 790 2.046314 GTACGCATGGCCACCAGT 60.046 61.111 8.16 11.08 36.75 4.00
840 849 3.243636 ACGTACATGACCTCGTGTTTCTT 60.244 43.478 0.00 0.00 43.01 2.52
855 864 3.313803 TGTTTCTTGCTGCATTGTCGTTA 59.686 39.130 1.84 0.00 0.00 3.18
870 881 3.119209 TGTCGTTACATATACGGTTGGCA 60.119 43.478 0.00 0.00 39.38 4.92
878 889 0.685097 ATACGGTTGGCACAGACTGT 59.315 50.000 1.07 1.07 42.39 3.55
952 973 5.010922 TGCCACAAAGCAAAGTTGAAGATAT 59.989 36.000 0.00 0.00 40.56 1.63
953 974 6.208402 TGCCACAAAGCAAAGTTGAAGATATA 59.792 34.615 0.00 0.00 40.56 0.86
954 975 6.749118 GCCACAAAGCAAAGTTGAAGATATAG 59.251 38.462 0.00 0.00 0.00 1.31
955 976 6.749118 CCACAAAGCAAAGTTGAAGATATAGC 59.251 38.462 0.00 0.00 0.00 2.97
956 977 7.362401 CCACAAAGCAAAGTTGAAGATATAGCT 60.362 37.037 0.00 0.00 0.00 3.32
1007 1032 4.636206 ACTCCTTTTAAATCTCATGGCGAC 59.364 41.667 0.00 0.00 0.00 5.19
1088 1113 4.225984 CAACAACGGGACACATGTATTTG 58.774 43.478 0.00 0.00 0.00 2.32
1089 1114 2.817258 ACAACGGGACACATGTATTTGG 59.183 45.455 0.00 0.00 0.00 3.28
1110 1135 2.426122 TATCAGCTCATCGCCGGCAG 62.426 60.000 28.98 17.51 40.39 4.85
1301 1455 7.629157 TGAATTAGGTGAACTGGATTATCACA 58.371 34.615 7.36 0.00 44.05 3.58
1302 1456 7.770433 TGAATTAGGTGAACTGGATTATCACAG 59.230 37.037 7.36 8.46 44.05 3.66
1311 1465 6.525578 ACTGGATTATCACAGTTCTCGTAA 57.474 37.500 9.47 0.00 45.03 3.18
1312 1466 7.113658 ACTGGATTATCACAGTTCTCGTAAT 57.886 36.000 9.47 0.00 45.03 1.89
1313 1467 6.980978 ACTGGATTATCACAGTTCTCGTAATG 59.019 38.462 9.47 0.00 45.03 1.90
1314 1468 5.753438 TGGATTATCACAGTTCTCGTAATGC 59.247 40.000 0.00 0.00 0.00 3.56
1315 1469 5.177696 GGATTATCACAGTTCTCGTAATGCC 59.822 44.000 0.00 0.00 0.00 4.40
1316 1470 3.610040 ATCACAGTTCTCGTAATGCCA 57.390 42.857 0.00 0.00 0.00 4.92
1317 1471 2.959516 TCACAGTTCTCGTAATGCCAG 58.040 47.619 0.00 0.00 0.00 4.85
1318 1472 2.560981 TCACAGTTCTCGTAATGCCAGA 59.439 45.455 0.00 0.00 0.00 3.86
1319 1473 2.668457 CACAGTTCTCGTAATGCCAGAC 59.332 50.000 0.00 0.00 0.00 3.51
1320 1474 2.563179 ACAGTTCTCGTAATGCCAGACT 59.437 45.455 0.00 0.00 0.00 3.24
1321 1475 3.762288 ACAGTTCTCGTAATGCCAGACTA 59.238 43.478 0.00 0.00 0.00 2.59
1322 1476 4.142359 ACAGTTCTCGTAATGCCAGACTAG 60.142 45.833 0.00 0.00 0.00 2.57
1323 1477 4.017808 AGTTCTCGTAATGCCAGACTAGT 58.982 43.478 0.00 0.00 0.00 2.57
1324 1478 5.066117 CAGTTCTCGTAATGCCAGACTAGTA 59.934 44.000 0.00 0.00 0.00 1.82
1325 1479 5.651139 AGTTCTCGTAATGCCAGACTAGTAA 59.349 40.000 0.00 0.00 0.00 2.24
1326 1480 5.496133 TCTCGTAATGCCAGACTAGTAAC 57.504 43.478 0.00 0.00 0.00 2.50
1327 1481 4.945543 TCTCGTAATGCCAGACTAGTAACA 59.054 41.667 0.00 0.00 0.00 2.41
1328 1482 5.066117 TCTCGTAATGCCAGACTAGTAACAG 59.934 44.000 0.00 0.00 0.00 3.16
1373 1564 3.441496 ACTTTTGCCGGCATGATTATG 57.559 42.857 33.25 17.74 37.36 1.90
1661 1858 6.016943 GGCGGGCACTACACATATTTTAATTA 60.017 38.462 0.00 0.00 0.00 1.40
1745 2262 2.817258 GTGTAGCAGGTTATTGTTGCCA 59.183 45.455 0.00 0.00 38.58 4.92
1804 2321 8.788325 AGTTTCTAATTATGTTCTGGTGGTAC 57.212 34.615 0.00 0.00 0.00 3.34
1891 2409 5.071250 AGTGGAGTTGTTAGGTGTGTGATTA 59.929 40.000 0.00 0.00 0.00 1.75
1965 2512 4.529377 ACAGGGAGTTCTTATTCCACGTTA 59.471 41.667 0.00 0.00 35.09 3.18
2003 2550 2.741878 GCTATAACACTCACATGGCGGT 60.742 50.000 0.00 0.00 0.00 5.68
2041 2588 0.178921 TCACCTCAGCTTCCCACTCT 60.179 55.000 0.00 0.00 0.00 3.24
2092 2641 7.011499 TCCACTGCTAACTTATAAAAGGTGA 57.989 36.000 0.00 0.00 37.01 4.02
2316 2872 9.632807 TTTCACGGACTTAAAATAATTTGATGG 57.367 29.630 0.00 0.00 0.00 3.51
2655 3213 1.165270 ATTACTGCAGTTGGTTCCGC 58.835 50.000 27.06 0.00 0.00 5.54
2670 3228 1.222936 CCGCTCCTGGAGAATTGCT 59.777 57.895 27.53 0.00 0.00 3.91
2704 3262 1.824852 CCAATACCCAACAAAGAGGCC 59.175 52.381 0.00 0.00 0.00 5.19
2716 3274 2.749621 CAAAGAGGCCGCAATTAGTTCT 59.250 45.455 9.88 0.00 0.00 3.01
2968 3538 9.607988 TCAATATATATCACCACTTGACGTTTT 57.392 29.630 0.00 0.00 36.92 2.43
3110 3680 2.362077 GGATGTGGTTGACAAACTTGCT 59.638 45.455 4.57 0.00 38.36 3.91
3181 3751 2.546494 GGATCAAAGCCATCGCGGG 61.546 63.158 6.13 0.43 41.18 6.13
3283 4113 6.993902 TCCCTATTTGTCTTTTCGTTAAGTGT 59.006 34.615 0.00 0.00 0.00 3.55
3285 4115 8.943002 CCCTATTTGTCTTTTCGTTAAGTGTAT 58.057 33.333 0.00 0.00 0.00 2.29
3343 4176 6.286240 AGGAAAAGTGAGAAAAAGCAAAGT 57.714 33.333 0.00 0.00 0.00 2.66
3371 4204 6.752168 AGGAAAATTTTCTTGGATGACACTG 58.248 36.000 25.86 0.00 37.35 3.66
3381 4214 6.472016 TCTTGGATGACACTGCTTAATTACA 58.528 36.000 0.00 0.00 0.00 2.41
3410 4243 4.157656 GGTTCAATGAATGGGTCGAATGAA 59.842 41.667 0.00 0.00 0.00 2.57
3415 4248 7.479980 TCAATGAATGGGTCGAATGAAAATAC 58.520 34.615 0.00 0.00 0.00 1.89
3419 4252 5.772825 ATGGGTCGAATGAAAATACATGG 57.227 39.130 0.00 0.00 0.00 3.66
3459 4295 1.533994 AGGGCCTCTTTGGTTTGCC 60.534 57.895 0.00 0.00 41.42 4.52
3474 4310 3.244345 GGTTTGCCGCTTTCTAAAAACAC 59.756 43.478 0.00 0.00 30.89 3.32
3704 4549 2.086610 AAGGTGGTCCAAGTGCATTT 57.913 45.000 0.00 0.00 35.89 2.32
3946 4797 3.372897 TGATTGGCCATTTGCATCCTAA 58.627 40.909 6.09 0.00 43.89 2.69
4017 4870 6.638168 GCTTTTAGTGCCATGAGAAAATTC 57.362 37.500 0.00 0.00 0.00 2.17
4129 4982 9.823098 CATGTGTTTTCAAATCTTTTGTTTTGA 57.177 25.926 0.39 0.00 42.78 2.69
4263 5120 2.588720 ACCTCCATACCAGTGTACCCTA 59.411 50.000 0.00 0.00 0.00 3.53
4297 5154 4.970472 TCATTTTTGCATCAAAGTTCGC 57.030 36.364 0.00 0.00 34.72 4.70
4302 5159 0.240678 TGCATCAAAGTTCGCGCAAT 59.759 45.000 8.75 0.00 0.00 3.56
4398 5256 1.541147 TGCTACCATGTGCAGAAAAGC 59.459 47.619 0.00 0.00 34.84 3.51
4403 5261 2.287788 ACCATGTGCAGAAAAGCTTTCG 60.288 45.455 13.10 5.54 34.99 3.46
4430 5290 5.991328 TTTTGGCGCAACATAAATTTTCA 57.009 30.435 10.83 0.00 0.00 2.69
4630 5493 4.035909 ACGAACCTTGACGCAAACTAAATT 59.964 37.500 0.00 0.00 0.00 1.82
4657 5520 8.024285 GTCTAAGTAGATGATACACTGGTATGC 58.976 40.741 0.00 0.00 36.17 3.14
4734 5597 1.626321 ACATGTGGACCCGTATGTCAA 59.374 47.619 0.00 0.00 36.97 3.18
4887 5765 5.871465 TGCTCGCAAAATTGATTGTACTA 57.129 34.783 0.00 0.00 32.80 1.82
4926 5804 4.101114 ACTAACTCATGGTATGGTGGTGA 58.899 43.478 0.00 0.00 0.00 4.02
4960 5838 7.104290 ACCTAGTGTAGTTCCTTGCTAAATTC 58.896 38.462 0.00 0.00 0.00 2.17
4961 5839 7.103641 CCTAGTGTAGTTCCTTGCTAAATTCA 58.896 38.462 0.00 0.00 0.00 2.57
4962 5840 7.770897 CCTAGTGTAGTTCCTTGCTAAATTCAT 59.229 37.037 0.00 0.00 0.00 2.57
5012 5890 1.327690 TGTAGCCTACTCTTGCCCGG 61.328 60.000 3.13 0.00 0.00 5.73
5013 5891 1.760875 TAGCCTACTCTTGCCCGGG 60.761 63.158 19.09 19.09 0.00 5.73
5143 6021 2.923121 ACGCTCAATGGCATTAGATGT 58.077 42.857 13.23 6.93 0.00 3.06
5263 6154 4.274794 TCCTAGATTACCCCACTTAGCA 57.725 45.455 0.00 0.00 0.00 3.49
5288 6179 3.889538 AGTTTGCCCACTTTTACTCCTTC 59.110 43.478 0.00 0.00 0.00 3.46
5346 6237 2.665165 ACCTTTTCTTCCATGTGCACA 58.335 42.857 24.08 24.08 0.00 4.57
5449 6347 2.742372 GCACGCGGTTCATGAGGT 60.742 61.111 12.47 0.00 0.00 3.85
5455 6353 1.983224 CGGTTCATGAGGTGGGTCT 59.017 57.895 0.00 0.00 0.00 3.85
5482 6380 2.826725 AGAGACGAGAACTGGTTTAGGG 59.173 50.000 0.00 0.00 0.00 3.53
5559 6458 7.557719 CACCTACCAGATCACTCCAAAATAATT 59.442 37.037 0.00 0.00 0.00 1.40
5598 6497 6.374588 TGGTAAAACTTTCACTAAATGGGGA 58.625 36.000 0.00 0.00 0.00 4.81
5628 6528 7.899648 TTGGAAACCACTTGTTAAATAGGAA 57.100 32.000 0.00 0.00 35.67 3.36
6008 6911 6.821665 CCGATTTTGAGTCCATTCTTTACCTA 59.178 38.462 0.00 0.00 0.00 3.08
6016 6919 4.809426 GTCCATTCTTTACCTATGTCCACG 59.191 45.833 0.00 0.00 0.00 4.94
6035 6938 8.089597 TGTCCACGTTCTATGTTAGAAAATACA 58.910 33.333 0.00 0.00 45.56 2.29
6060 6963 4.564821 GGGACACAAGCATAGTTTCTACCA 60.565 45.833 0.00 0.00 0.00 3.25
6127 7030 8.443937 ACGAATATAGCTTTCTTCTTTGTTGTC 58.556 33.333 0.00 0.00 0.00 3.18
6137 7040 6.119240 TCTTCTTTGTTGTCCAGATCTCAT 57.881 37.500 0.00 0.00 0.00 2.90
6160 7063 9.671279 TCATAATGAGATTGAGTGTGTACAATT 57.329 29.630 0.00 0.00 36.94 2.32
6174 7077 4.967575 GTGTACAATTTACCATGCGTATGC 59.032 41.667 8.12 0.00 43.20 3.14
6190 7093 4.260375 GCGTATGCAAGTAGAATTCCACAG 60.260 45.833 6.79 0.14 42.15 3.66
6201 7104 2.702270 ATTCCACAGGCCCTTCTTTT 57.298 45.000 0.00 0.00 0.00 2.27
6276 7179 7.654022 TTCTAAATCCCAACACTTTGTTTCT 57.346 32.000 0.00 0.00 38.77 2.52
6288 7191 7.432148 ACACTTTGTTTCTTCCCCTAAATTT 57.568 32.000 0.00 0.00 0.00 1.82
6336 7239 5.449553 ACAATTCCTTCCACAAGTTTCTCT 58.550 37.500 0.00 0.00 0.00 3.10
6486 7397 5.862924 TCACATAGCTAGTTTGAAGTTGC 57.137 39.130 0.00 0.00 0.00 4.17
6570 7481 5.122554 ACATGATGTTTTTATTCGGCGTGTA 59.877 36.000 6.85 0.00 0.00 2.90
6655 7567 7.593875 TTTTTATGTGGATGCAAAACTATGC 57.406 32.000 0.00 0.00 46.58 3.14
6739 7652 0.036306 AGTGACAGGCCCTTAAACCG 59.964 55.000 0.00 0.00 0.00 4.44
6821 7734 0.394352 GATGGGGGAGCGACATGTTT 60.394 55.000 0.00 0.00 0.00 2.83
6838 7752 3.643595 TTGGCGGGGGATTGCTCAG 62.644 63.158 0.00 0.00 0.00 3.35
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 5.182001 ACTCAAGCAATACAACCTAAAGCAG 59.818 40.000 0.00 0.00 0.00 4.24
1 2 5.070001 ACTCAAGCAATACAACCTAAAGCA 58.930 37.500 0.00 0.00 0.00 3.91
2 3 5.629079 ACTCAAGCAATACAACCTAAAGC 57.371 39.130 0.00 0.00 0.00 3.51
3 4 6.797033 CGAAACTCAAGCAATACAACCTAAAG 59.203 38.462 0.00 0.00 0.00 1.85
4 5 6.483974 TCGAAACTCAAGCAATACAACCTAAA 59.516 34.615 0.00 0.00 0.00 1.85
5 6 5.992829 TCGAAACTCAAGCAATACAACCTAA 59.007 36.000 0.00 0.00 0.00 2.69
6 7 5.543714 TCGAAACTCAAGCAATACAACCTA 58.456 37.500 0.00 0.00 0.00 3.08
7 8 4.385825 TCGAAACTCAAGCAATACAACCT 58.614 39.130 0.00 0.00 0.00 3.50
8 9 4.742438 TCGAAACTCAAGCAATACAACC 57.258 40.909 0.00 0.00 0.00 3.77
9 10 6.741358 GGTAATCGAAACTCAAGCAATACAAC 59.259 38.462 0.00 0.00 0.00 3.32
10 11 6.428465 TGGTAATCGAAACTCAAGCAATACAA 59.572 34.615 0.00 0.00 0.00 2.41
11 12 5.935206 TGGTAATCGAAACTCAAGCAATACA 59.065 36.000 0.00 0.00 0.00 2.29
12 13 6.417191 TGGTAATCGAAACTCAAGCAATAC 57.583 37.500 0.00 0.00 0.00 1.89
13 14 5.584649 CCTGGTAATCGAAACTCAAGCAATA 59.415 40.000 0.00 0.00 0.00 1.90
14 15 4.396166 CCTGGTAATCGAAACTCAAGCAAT 59.604 41.667 0.00 0.00 0.00 3.56
15 16 3.751175 CCTGGTAATCGAAACTCAAGCAA 59.249 43.478 0.00 0.00 0.00 3.91
16 17 3.244422 ACCTGGTAATCGAAACTCAAGCA 60.244 43.478 0.00 0.00 0.00 3.91
17 18 3.335579 ACCTGGTAATCGAAACTCAAGC 58.664 45.455 0.00 0.00 0.00 4.01
18 19 4.567159 GCTACCTGGTAATCGAAACTCAAG 59.433 45.833 8.11 0.00 0.00 3.02
19 20 4.501071 GCTACCTGGTAATCGAAACTCAA 58.499 43.478 8.11 0.00 0.00 3.02
20 21 3.428452 CGCTACCTGGTAATCGAAACTCA 60.428 47.826 17.94 0.00 0.00 3.41
21 22 3.114065 CGCTACCTGGTAATCGAAACTC 58.886 50.000 17.94 0.00 0.00 3.01
22 23 2.756760 TCGCTACCTGGTAATCGAAACT 59.243 45.455 21.14 0.00 0.00 2.66
23 24 3.155093 TCGCTACCTGGTAATCGAAAC 57.845 47.619 21.14 0.00 0.00 2.78
24 25 3.872511 TTCGCTACCTGGTAATCGAAA 57.127 42.857 27.00 17.19 33.59 3.46
25 26 4.555313 CGTATTCGCTACCTGGTAATCGAA 60.555 45.833 29.17 29.17 37.42 3.71
26 27 3.058708 CGTATTCGCTACCTGGTAATCGA 60.059 47.826 20.14 20.14 0.00 3.59
27 28 3.231965 CGTATTCGCTACCTGGTAATCG 58.768 50.000 17.13 17.13 0.00 3.34
41 42 1.359848 AGCAAGGTCAAGCGTATTCG 58.640 50.000 0.00 0.00 40.37 3.34
42 43 3.831715 AAAGCAAGGTCAAGCGTATTC 57.168 42.857 0.00 0.00 35.48 1.75
43 44 3.568007 TCAAAAGCAAGGTCAAGCGTATT 59.432 39.130 0.00 0.00 35.48 1.89
44 45 3.146066 TCAAAAGCAAGGTCAAGCGTAT 58.854 40.909 0.00 0.00 35.48 3.06
45 46 2.566913 TCAAAAGCAAGGTCAAGCGTA 58.433 42.857 0.00 0.00 35.48 4.42
46 47 1.388547 TCAAAAGCAAGGTCAAGCGT 58.611 45.000 0.00 0.00 35.48 5.07
47 48 2.712057 ATCAAAAGCAAGGTCAAGCG 57.288 45.000 0.00 0.00 35.48 4.68
48 49 2.477754 GCAATCAAAAGCAAGGTCAAGC 59.522 45.455 0.00 0.00 0.00 4.01
49 50 3.986277 AGCAATCAAAAGCAAGGTCAAG 58.014 40.909 0.00 0.00 0.00 3.02
50 51 4.121317 CAAGCAATCAAAAGCAAGGTCAA 58.879 39.130 0.00 0.00 0.00 3.18
51 52 3.132646 ACAAGCAATCAAAAGCAAGGTCA 59.867 39.130 0.00 0.00 0.00 4.02
52 53 3.721035 ACAAGCAATCAAAAGCAAGGTC 58.279 40.909 0.00 0.00 0.00 3.85
53 54 3.825143 ACAAGCAATCAAAAGCAAGGT 57.175 38.095 0.00 0.00 0.00 3.50
54 55 4.812626 AGAAACAAGCAATCAAAAGCAAGG 59.187 37.500 0.00 0.00 0.00 3.61
55 56 5.978934 AGAAACAAGCAATCAAAAGCAAG 57.021 34.783 0.00 0.00 0.00 4.01
56 57 5.447548 GCAAGAAACAAGCAATCAAAAGCAA 60.448 36.000 0.00 0.00 0.00 3.91
57 58 4.034279 GCAAGAAACAAGCAATCAAAAGCA 59.966 37.500 0.00 0.00 0.00 3.91
58 59 4.521010 GCAAGAAACAAGCAATCAAAAGC 58.479 39.130 0.00 0.00 0.00 3.51
59 60 4.812626 AGGCAAGAAACAAGCAATCAAAAG 59.187 37.500 0.00 0.00 0.00 2.27
60 61 4.768583 AGGCAAGAAACAAGCAATCAAAA 58.231 34.783 0.00 0.00 0.00 2.44
61 62 4.405116 AGGCAAGAAACAAGCAATCAAA 57.595 36.364 0.00 0.00 0.00 2.69
62 63 4.405116 AAGGCAAGAAACAAGCAATCAA 57.595 36.364 0.00 0.00 0.00 2.57
63 64 5.288804 GTTAAGGCAAGAAACAAGCAATCA 58.711 37.500 0.00 0.00 0.00 2.57
64 65 4.686091 GGTTAAGGCAAGAAACAAGCAATC 59.314 41.667 0.00 0.00 0.00 2.67
65 66 4.503123 GGGTTAAGGCAAGAAACAAGCAAT 60.503 41.667 0.00 0.00 0.00 3.56
66 67 3.181470 GGGTTAAGGCAAGAAACAAGCAA 60.181 43.478 0.00 0.00 0.00 3.91
67 68 2.364002 GGGTTAAGGCAAGAAACAAGCA 59.636 45.455 0.00 0.00 0.00 3.91
68 69 2.607038 CGGGTTAAGGCAAGAAACAAGC 60.607 50.000 0.00 0.00 0.00 4.01
69 70 2.607038 GCGGGTTAAGGCAAGAAACAAG 60.607 50.000 0.00 0.00 0.00 3.16
70 71 1.338655 GCGGGTTAAGGCAAGAAACAA 59.661 47.619 0.00 0.00 0.00 2.83
71 72 0.955905 GCGGGTTAAGGCAAGAAACA 59.044 50.000 0.00 0.00 0.00 2.83
72 73 0.242825 GGCGGGTTAAGGCAAGAAAC 59.757 55.000 0.00 0.00 0.00 2.78
73 74 1.238625 CGGCGGGTTAAGGCAAGAAA 61.239 55.000 0.00 0.00 0.00 2.52
74 75 1.673009 CGGCGGGTTAAGGCAAGAA 60.673 57.895 0.00 0.00 0.00 2.52
75 76 2.046700 CGGCGGGTTAAGGCAAGA 60.047 61.111 0.00 0.00 0.00 3.02
76 77 3.810896 GCGGCGGGTTAAGGCAAG 61.811 66.667 9.78 0.00 0.00 4.01
97 98 6.243216 TCAACCTGTATATAAAGGGGTGAC 57.757 41.667 21.09 0.00 37.94 3.67
98 99 6.388689 ACATCAACCTGTATATAAAGGGGTGA 59.611 38.462 21.09 21.26 37.94 4.02
99 100 6.601332 ACATCAACCTGTATATAAAGGGGTG 58.399 40.000 21.09 17.55 37.94 4.61
100 101 6.183361 GGACATCAACCTGTATATAAAGGGGT 60.183 42.308 21.09 11.50 37.94 4.95
101 102 6.044404 AGGACATCAACCTGTATATAAAGGGG 59.956 42.308 21.09 13.45 37.94 4.79
102 103 7.079451 AGGACATCAACCTGTATATAAAGGG 57.921 40.000 21.09 6.43 37.94 3.95
103 104 6.868864 CGAGGACATCAACCTGTATATAAAGG 59.131 42.308 16.43 16.43 37.93 3.11
104 105 6.868864 CCGAGGACATCAACCTGTATATAAAG 59.131 42.308 0.00 0.00 37.93 1.85
105 106 6.325545 ACCGAGGACATCAACCTGTATATAAA 59.674 38.462 0.00 0.00 37.93 1.40
106 107 5.836898 ACCGAGGACATCAACCTGTATATAA 59.163 40.000 0.00 0.00 37.93 0.98
107 108 5.243060 CACCGAGGACATCAACCTGTATATA 59.757 44.000 0.00 0.00 37.93 0.86
108 109 4.039245 CACCGAGGACATCAACCTGTATAT 59.961 45.833 0.00 0.00 37.93 0.86
109 110 3.383505 CACCGAGGACATCAACCTGTATA 59.616 47.826 0.00 0.00 37.93 1.47
110 111 2.168521 CACCGAGGACATCAACCTGTAT 59.831 50.000 0.00 0.00 37.93 2.29
111 112 1.548719 CACCGAGGACATCAACCTGTA 59.451 52.381 0.00 0.00 37.93 2.74
112 113 0.321671 CACCGAGGACATCAACCTGT 59.678 55.000 0.00 0.00 37.93 4.00
113 114 0.391661 CCACCGAGGACATCAACCTG 60.392 60.000 0.00 0.00 41.22 4.00
114 115 1.983224 CCACCGAGGACATCAACCT 59.017 57.895 0.00 0.00 41.22 3.50
115 116 1.745489 GCCACCGAGGACATCAACC 60.745 63.158 0.00 0.00 41.22 3.77
116 117 0.321653 AAGCCACCGAGGACATCAAC 60.322 55.000 0.00 0.00 41.22 3.18
117 118 1.066430 GTAAGCCACCGAGGACATCAA 60.066 52.381 0.00 0.00 41.22 2.57
118 119 0.535335 GTAAGCCACCGAGGACATCA 59.465 55.000 0.00 0.00 41.22 3.07
119 120 0.535335 TGTAAGCCACCGAGGACATC 59.465 55.000 0.00 0.00 41.22 3.06
120 121 0.537188 CTGTAAGCCACCGAGGACAT 59.463 55.000 0.00 0.00 41.22 3.06
121 122 0.541063 TCTGTAAGCCACCGAGGACA 60.541 55.000 0.00 0.00 41.22 4.02
122 123 0.173708 CTCTGTAAGCCACCGAGGAC 59.826 60.000 0.00 0.00 41.22 3.85
123 124 0.251653 ACTCTGTAAGCCACCGAGGA 60.252 55.000 10.79 0.00 41.45 3.71
124 125 0.173708 GACTCTGTAAGCCACCGAGG 59.826 60.000 10.79 0.00 41.45 4.63
125 126 0.888619 TGACTCTGTAAGCCACCGAG 59.111 55.000 6.10 6.10 42.49 4.63
126 127 0.601558 GTGACTCTGTAAGCCACCGA 59.398 55.000 0.00 0.00 0.00 4.69
127 128 0.732880 CGTGACTCTGTAAGCCACCG 60.733 60.000 0.00 0.00 0.00 4.94
128 129 0.389948 CCGTGACTCTGTAAGCCACC 60.390 60.000 0.00 0.00 0.00 4.61
129 130 1.014564 GCCGTGACTCTGTAAGCCAC 61.015 60.000 0.00 0.00 0.00 5.01
130 131 1.292223 GCCGTGACTCTGTAAGCCA 59.708 57.895 0.00 0.00 0.00 4.75
131 132 1.448013 GGCCGTGACTCTGTAAGCC 60.448 63.158 0.00 0.00 0.00 4.35
132 133 1.805945 CGGCCGTGACTCTGTAAGC 60.806 63.158 19.50 0.00 0.00 3.09
133 134 1.153823 CCGGCCGTGACTCTGTAAG 60.154 63.158 26.12 0.00 0.00 2.34
134 135 2.967397 CCGGCCGTGACTCTGTAA 59.033 61.111 26.12 0.00 0.00 2.41
135 136 3.755628 GCCGGCCGTGACTCTGTA 61.756 66.667 26.12 0.00 0.00 2.74
137 138 4.803426 GAGCCGGCCGTGACTCTG 62.803 72.222 26.15 7.77 0.00 3.35
141 142 2.845752 TTATGTGAGCCGGCCGTGAC 62.846 60.000 26.15 15.13 0.00 3.67
142 143 2.173758 TTTATGTGAGCCGGCCGTGA 62.174 55.000 26.15 5.38 0.00 4.35
143 144 1.743623 TTTATGTGAGCCGGCCGTG 60.744 57.895 26.15 16.79 0.00 4.94
144 145 1.743995 GTTTATGTGAGCCGGCCGT 60.744 57.895 26.15 12.29 0.00 5.68
145 146 2.808958 CGTTTATGTGAGCCGGCCG 61.809 63.158 26.15 21.04 0.00 6.13
146 147 3.098555 CGTTTATGTGAGCCGGCC 58.901 61.111 26.15 15.80 0.00 6.13
147 148 2.403586 GCGTTTATGTGAGCCGGC 59.596 61.111 21.89 21.89 0.00 6.13
148 149 1.807981 TCGCGTTTATGTGAGCCGG 60.808 57.895 5.77 0.00 0.00 6.13
149 150 1.343821 GTCGCGTTTATGTGAGCCG 59.656 57.895 5.77 0.00 0.00 5.52
150 151 1.713830 GGTCGCGTTTATGTGAGCC 59.286 57.895 5.77 0.00 40.12 4.70
151 152 1.343821 CGGTCGCGTTTATGTGAGC 59.656 57.895 5.77 4.97 41.98 4.26
152 153 1.995991 CCGGTCGCGTTTATGTGAG 59.004 57.895 5.77 0.00 0.00 3.51
153 154 2.095847 GCCGGTCGCGTTTATGTGA 61.096 57.895 5.77 0.00 0.00 3.58
154 155 2.020836 GAGCCGGTCGCGTTTATGTG 62.021 60.000 5.77 0.00 44.76 3.21
155 156 1.808390 GAGCCGGTCGCGTTTATGT 60.808 57.895 5.77 0.00 44.76 2.29
156 157 2.856346 CGAGCCGGTCGCGTTTATG 61.856 63.158 5.77 0.00 43.03 1.90
157 158 2.581409 CGAGCCGGTCGCGTTTAT 60.581 61.111 5.77 0.00 43.03 1.40
168 169 2.669924 GGTTTAGTTAGAAACCGAGCCG 59.330 50.000 2.50 0.00 46.62 5.52
175 176 7.664758 TCTGTGAGGTAGGTTTAGTTAGAAAC 58.335 38.462 0.00 0.00 38.38 2.78
176 177 7.844493 TCTGTGAGGTAGGTTTAGTTAGAAA 57.156 36.000 0.00 0.00 0.00 2.52
177 178 7.288389 TGTTCTGTGAGGTAGGTTTAGTTAGAA 59.712 37.037 0.00 0.00 0.00 2.10
178 179 6.779049 TGTTCTGTGAGGTAGGTTTAGTTAGA 59.221 38.462 0.00 0.00 0.00 2.10
179 180 6.989659 TGTTCTGTGAGGTAGGTTTAGTTAG 58.010 40.000 0.00 0.00 0.00 2.34
180 181 6.014840 CCTGTTCTGTGAGGTAGGTTTAGTTA 60.015 42.308 0.00 0.00 0.00 2.24
181 182 5.221661 CCTGTTCTGTGAGGTAGGTTTAGTT 60.222 44.000 0.00 0.00 0.00 2.24
182 183 4.283722 CCTGTTCTGTGAGGTAGGTTTAGT 59.716 45.833 0.00 0.00 0.00 2.24
183 184 4.283722 ACCTGTTCTGTGAGGTAGGTTTAG 59.716 45.833 0.00 0.00 41.01 1.85
184 185 4.228824 ACCTGTTCTGTGAGGTAGGTTTA 58.771 43.478 0.00 0.00 41.01 2.01
185 186 3.046374 ACCTGTTCTGTGAGGTAGGTTT 58.954 45.455 0.00 0.00 41.01 3.27
186 187 2.690840 ACCTGTTCTGTGAGGTAGGTT 58.309 47.619 0.00 0.00 41.01 3.50
187 188 2.400467 ACCTGTTCTGTGAGGTAGGT 57.600 50.000 0.00 0.00 41.01 3.08
188 189 3.771577 AAACCTGTTCTGTGAGGTAGG 57.228 47.619 0.00 0.00 42.03 3.18
189 190 5.607477 TGTTAAACCTGTTCTGTGAGGTAG 58.393 41.667 0.00 0.00 42.03 3.18
190 191 5.617528 TGTTAAACCTGTTCTGTGAGGTA 57.382 39.130 0.00 0.00 42.03 3.08
191 192 4.497291 TGTTAAACCTGTTCTGTGAGGT 57.503 40.909 0.00 0.00 44.94 3.85
192 193 6.878923 TCATATGTTAAACCTGTTCTGTGAGG 59.121 38.462 1.90 0.00 35.26 3.86
193 194 7.411912 CGTCATATGTTAAACCTGTTCTGTGAG 60.412 40.741 1.90 0.00 0.00 3.51
194 195 6.367695 CGTCATATGTTAAACCTGTTCTGTGA 59.632 38.462 1.90 0.00 0.00 3.58
195 196 6.402118 CCGTCATATGTTAAACCTGTTCTGTG 60.402 42.308 1.90 0.00 0.00 3.66
196 197 5.642063 CCGTCATATGTTAAACCTGTTCTGT 59.358 40.000 1.90 0.00 0.00 3.41
197 198 5.447279 GCCGTCATATGTTAAACCTGTTCTG 60.447 44.000 1.90 0.00 0.00 3.02
198 199 4.634443 GCCGTCATATGTTAAACCTGTTCT 59.366 41.667 1.90 0.00 0.00 3.01
199 200 4.634443 AGCCGTCATATGTTAAACCTGTTC 59.366 41.667 1.90 0.00 0.00 3.18
200 201 4.585879 AGCCGTCATATGTTAAACCTGTT 58.414 39.130 1.90 0.00 0.00 3.16
201 202 4.189231 GAGCCGTCATATGTTAAACCTGT 58.811 43.478 1.90 0.00 0.00 4.00
202 203 4.034048 GTGAGCCGTCATATGTTAAACCTG 59.966 45.833 1.90 0.00 34.36 4.00
203 204 4.189231 GTGAGCCGTCATATGTTAAACCT 58.811 43.478 1.90 0.00 34.36 3.50
204 205 3.000925 CGTGAGCCGTCATATGTTAAACC 59.999 47.826 1.90 0.00 34.36 3.27
205 206 4.178156 CGTGAGCCGTCATATGTTAAAC 57.822 45.455 1.90 0.00 34.36 2.01
234 235 4.214327 CCGGAGAAGGCTCGAGGC 62.214 72.222 30.15 30.15 42.25 4.70
235 236 3.532155 CCCGGAGAAGGCTCGAGG 61.532 72.222 15.58 0.00 42.25 4.63
236 237 2.756283 ACCCGGAGAAGGCTCGAG 60.756 66.667 8.45 8.45 42.25 4.04
237 238 2.754658 GACCCGGAGAAGGCTCGA 60.755 66.667 0.73 0.00 42.25 4.04
238 239 2.352032 AAGACCCGGAGAAGGCTCG 61.352 63.158 0.73 0.00 42.25 5.03
239 240 1.219393 CAAGACCCGGAGAAGGCTC 59.781 63.158 0.73 0.00 40.54 4.70
240 241 2.294078 CCAAGACCCGGAGAAGGCT 61.294 63.158 0.73 0.00 0.00 4.58
241 242 2.269241 CCAAGACCCGGAGAAGGC 59.731 66.667 0.73 0.00 0.00 4.35
242 243 2.990479 CCCAAGACCCGGAGAAGG 59.010 66.667 0.73 0.00 0.00 3.46
243 244 2.269241 GCCCAAGACCCGGAGAAG 59.731 66.667 0.73 0.00 0.00 2.85
244 245 3.327404 GGCCCAAGACCCGGAGAA 61.327 66.667 0.73 0.00 0.00 2.87
245 246 3.864983 AAGGCCCAAGACCCGGAGA 62.865 63.158 0.73 0.00 0.00 3.71
246 247 3.330720 AAGGCCCAAGACCCGGAG 61.331 66.667 0.73 0.00 0.00 4.63
247 248 3.327404 GAAGGCCCAAGACCCGGA 61.327 66.667 0.73 0.00 0.00 5.14
248 249 2.499303 ATTGAAGGCCCAAGACCCGG 62.499 60.000 0.00 0.00 0.00 5.73
249 250 0.254747 TATTGAAGGCCCAAGACCCG 59.745 55.000 0.00 0.00 0.00 5.28
250 251 2.379005 CTTATTGAAGGCCCAAGACCC 58.621 52.381 0.00 0.00 0.00 4.46
251 252 1.751351 GCTTATTGAAGGCCCAAGACC 59.249 52.381 0.00 0.00 32.84 3.85
252 253 2.728007 AGCTTATTGAAGGCCCAAGAC 58.272 47.619 0.00 0.00 32.84 3.01
253 254 3.091545 CAAGCTTATTGAAGGCCCAAGA 58.908 45.455 0.00 0.00 32.84 3.02
254 255 2.417787 GCAAGCTTATTGAAGGCCCAAG 60.418 50.000 0.00 0.00 32.84 3.61
255 256 1.550072 GCAAGCTTATTGAAGGCCCAA 59.450 47.619 0.00 0.00 32.84 4.12
256 257 1.185315 GCAAGCTTATTGAAGGCCCA 58.815 50.000 0.00 0.00 32.84 5.36
257 258 0.101219 CGCAAGCTTATTGAAGGCCC 59.899 55.000 0.00 0.00 32.84 5.80
258 259 3.629858 CGCAAGCTTATTGAAGGCC 57.370 52.632 0.00 0.00 32.84 5.19
276 277 2.890808 TCCAGATGACGGTTCATAGC 57.109 50.000 0.00 0.00 42.95 2.97
277 278 4.039730 AGGAATCCAGATGACGGTTCATAG 59.960 45.833 0.61 0.00 42.95 2.23
278 279 3.967326 AGGAATCCAGATGACGGTTCATA 59.033 43.478 0.61 0.00 42.95 2.15
279 280 2.774234 AGGAATCCAGATGACGGTTCAT 59.226 45.455 0.61 0.00 45.78 2.57
280 281 2.093500 CAGGAATCCAGATGACGGTTCA 60.093 50.000 0.61 0.00 35.73 3.18
281 282 2.555199 CAGGAATCCAGATGACGGTTC 58.445 52.381 0.61 0.00 0.00 3.62
282 283 1.210478 CCAGGAATCCAGATGACGGTT 59.790 52.381 0.61 0.00 0.00 4.44
283 284 0.833287 CCAGGAATCCAGATGACGGT 59.167 55.000 0.61 0.00 0.00 4.83
284 285 1.123077 TCCAGGAATCCAGATGACGG 58.877 55.000 0.61 0.00 0.00 4.79
285 286 1.202580 GGTCCAGGAATCCAGATGACG 60.203 57.143 0.61 0.00 0.00 4.35
286 287 2.103941 GAGGTCCAGGAATCCAGATGAC 59.896 54.545 0.61 2.17 0.00 3.06
287 288 2.293118 TGAGGTCCAGGAATCCAGATGA 60.293 50.000 0.61 0.00 0.00 2.92
288 289 2.121948 TGAGGTCCAGGAATCCAGATG 58.878 52.381 0.61 0.00 0.00 2.90
289 290 2.575921 TGAGGTCCAGGAATCCAGAT 57.424 50.000 0.61 0.00 0.00 2.90
290 291 2.507058 CAATGAGGTCCAGGAATCCAGA 59.493 50.000 0.61 0.00 0.00 3.86
291 292 2.422519 CCAATGAGGTCCAGGAATCCAG 60.423 54.545 0.61 0.00 0.00 3.86
292 293 1.565759 CCAATGAGGTCCAGGAATCCA 59.434 52.381 0.61 0.00 0.00 3.41
293 294 1.133668 CCCAATGAGGTCCAGGAATCC 60.134 57.143 0.00 0.00 34.66 3.01
294 295 1.752084 GCCCAATGAGGTCCAGGAATC 60.752 57.143 0.00 0.00 34.66 2.52
295 296 0.259938 GCCCAATGAGGTCCAGGAAT 59.740 55.000 0.00 0.00 34.66 3.01
296 297 1.691219 GCCCAATGAGGTCCAGGAA 59.309 57.895 0.00 0.00 34.66 3.36
297 298 2.308722 GGCCCAATGAGGTCCAGGA 61.309 63.158 0.00 0.00 34.66 3.86
298 299 2.276309 GAGGCCCAATGAGGTCCAGG 62.276 65.000 0.00 0.00 34.66 4.45
299 300 1.225704 GAGGCCCAATGAGGTCCAG 59.774 63.158 0.00 0.00 34.66 3.86
300 301 2.308722 GGAGGCCCAATGAGGTCCA 61.309 63.158 0.00 0.00 31.80 4.02
301 302 1.988982 GAGGAGGCCCAATGAGGTCC 61.989 65.000 0.00 0.00 34.66 4.46
302 303 1.274703 TGAGGAGGCCCAATGAGGTC 61.275 60.000 0.00 0.00 34.66 3.85
303 304 0.625683 ATGAGGAGGCCCAATGAGGT 60.626 55.000 0.00 0.00 34.66 3.85
304 305 0.110104 GATGAGGAGGCCCAATGAGG 59.890 60.000 0.00 0.00 33.88 3.86
305 306 1.138568 AGATGAGGAGGCCCAATGAG 58.861 55.000 0.00 0.00 33.88 2.90
306 307 1.600058 AAGATGAGGAGGCCCAATGA 58.400 50.000 0.00 0.00 33.88 2.57
307 308 3.117738 ACTTAAGATGAGGAGGCCCAATG 60.118 47.826 10.09 0.00 33.88 2.82
308 309 3.126453 ACTTAAGATGAGGAGGCCCAAT 58.874 45.455 10.09 0.00 33.88 3.16
309 310 2.505819 GACTTAAGATGAGGAGGCCCAA 59.494 50.000 10.09 0.00 33.88 4.12
310 311 2.119495 GACTTAAGATGAGGAGGCCCA 58.881 52.381 10.09 0.00 33.88 5.36
311 312 1.069358 CGACTTAAGATGAGGAGGCCC 59.931 57.143 10.09 0.00 0.00 5.80
312 313 1.757699 ACGACTTAAGATGAGGAGGCC 59.242 52.381 10.09 0.00 0.00 5.19
313 314 2.427453 TGACGACTTAAGATGAGGAGGC 59.573 50.000 10.09 0.00 0.00 4.70
314 315 4.720649 TTGACGACTTAAGATGAGGAGG 57.279 45.455 10.09 0.00 0.00 4.30
315 316 5.046529 CCATTGACGACTTAAGATGAGGAG 58.953 45.833 10.09 0.00 0.00 3.69
316 317 4.466370 ACCATTGACGACTTAAGATGAGGA 59.534 41.667 10.09 0.00 0.00 3.71
317 318 4.759782 ACCATTGACGACTTAAGATGAGG 58.240 43.478 10.09 2.74 0.00 3.86
318 319 7.042456 CCAATACCATTGACGACTTAAGATGAG 60.042 40.741 10.09 0.00 0.00 2.90
319 320 6.761242 CCAATACCATTGACGACTTAAGATGA 59.239 38.462 10.09 0.00 0.00 2.92
320 321 6.511767 GCCAATACCATTGACGACTTAAGATG 60.512 42.308 10.09 3.31 0.00 2.90
321 322 5.527582 GCCAATACCATTGACGACTTAAGAT 59.472 40.000 10.09 0.00 0.00 2.40
322 323 4.873827 GCCAATACCATTGACGACTTAAGA 59.126 41.667 10.09 0.00 0.00 2.10
323 324 4.035208 GGCCAATACCATTGACGACTTAAG 59.965 45.833 0.00 0.00 0.00 1.85
324 325 3.942748 GGCCAATACCATTGACGACTTAA 59.057 43.478 0.00 0.00 0.00 1.85
325 326 3.537580 GGCCAATACCATTGACGACTTA 58.462 45.455 0.00 0.00 0.00 2.24
326 327 2.365582 GGCCAATACCATTGACGACTT 58.634 47.619 0.00 0.00 0.00 3.01
327 328 1.408266 GGGCCAATACCATTGACGACT 60.408 52.381 4.39 0.00 0.00 4.18
328 329 1.021968 GGGCCAATACCATTGACGAC 58.978 55.000 4.39 0.00 0.00 4.34
329 330 0.462937 CGGGCCAATACCATTGACGA 60.463 55.000 4.39 0.00 0.00 4.20
330 331 1.444119 CCGGGCCAATACCATTGACG 61.444 60.000 4.39 0.00 0.00 4.35
331 332 1.734388 GCCGGGCCAATACCATTGAC 61.734 60.000 8.12 0.00 0.00 3.18
332 333 1.454847 GCCGGGCCAATACCATTGA 60.455 57.895 8.12 0.00 0.00 2.57
333 334 3.128375 GCCGGGCCAATACCATTG 58.872 61.111 8.12 0.00 0.00 2.82
360 361 4.864334 CTCCCAGGCATGACCCGC 62.864 72.222 0.00 0.00 40.58 6.13
361 362 4.864334 GCTCCCAGGCATGACCCG 62.864 72.222 0.00 0.00 40.58 5.28
362 363 1.422161 ATAGCTCCCAGGCATGACCC 61.422 60.000 0.00 0.00 40.58 4.46
363 364 1.352083 TATAGCTCCCAGGCATGACC 58.648 55.000 0.00 0.00 39.61 4.02
364 365 2.836981 AGATATAGCTCCCAGGCATGAC 59.163 50.000 0.00 0.00 34.17 3.06
365 366 3.102972 GAGATATAGCTCCCAGGCATGA 58.897 50.000 6.75 0.00 34.17 3.07
366 367 3.540314 GAGATATAGCTCCCAGGCATG 57.460 52.381 6.75 0.00 34.17 4.06
375 376 4.865365 GGCGTATTGTTGGAGATATAGCTC 59.135 45.833 9.58 9.58 0.00 4.09
376 377 4.283467 TGGCGTATTGTTGGAGATATAGCT 59.717 41.667 0.00 0.00 0.00 3.32
377 378 4.566004 TGGCGTATTGTTGGAGATATAGC 58.434 43.478 0.00 0.00 0.00 2.97
378 379 6.092670 CCAATGGCGTATTGTTGGAGATATAG 59.907 42.308 11.70 0.00 43.78 1.31
379 380 5.937540 CCAATGGCGTATTGTTGGAGATATA 59.062 40.000 11.70 0.00 43.78 0.86
380 381 4.761739 CCAATGGCGTATTGTTGGAGATAT 59.238 41.667 11.70 0.00 43.78 1.63
381 382 4.133820 CCAATGGCGTATTGTTGGAGATA 58.866 43.478 11.70 0.00 43.78 1.98
382 383 2.951642 CCAATGGCGTATTGTTGGAGAT 59.048 45.455 11.70 0.00 43.78 2.75
383 384 2.364632 CCAATGGCGTATTGTTGGAGA 58.635 47.619 11.70 0.00 43.78 3.71
384 385 1.202290 GCCAATGGCGTATTGTTGGAG 60.202 52.381 9.14 0.91 43.78 3.86
385 386 0.814457 GCCAATGGCGTATTGTTGGA 59.186 50.000 9.14 0.00 43.78 3.53
386 387 3.344064 GCCAATGGCGTATTGTTGG 57.656 52.632 9.14 0.00 43.78 3.77
396 397 0.960364 TTTGAGAGTCCGCCAATGGC 60.960 55.000 15.52 15.52 46.75 4.40
397 398 1.533625 TTTTGAGAGTCCGCCAATGG 58.466 50.000 0.00 0.00 0.00 3.16
398 399 3.191162 TCATTTTTGAGAGTCCGCCAATG 59.809 43.478 0.00 0.00 0.00 2.82
399 400 3.420893 TCATTTTTGAGAGTCCGCCAAT 58.579 40.909 0.00 0.00 0.00 3.16
400 401 2.857483 TCATTTTTGAGAGTCCGCCAA 58.143 42.857 0.00 0.00 0.00 4.52
401 402 2.559698 TCATTTTTGAGAGTCCGCCA 57.440 45.000 0.00 0.00 0.00 5.69
402 403 3.915437 TTTCATTTTTGAGAGTCCGCC 57.085 42.857 0.00 0.00 0.00 6.13
403 404 5.281727 AGTTTTTCATTTTTGAGAGTCCGC 58.718 37.500 0.00 0.00 0.00 5.54
404 405 7.639945 AGTAGTTTTTCATTTTTGAGAGTCCG 58.360 34.615 0.00 0.00 0.00 4.79
405 406 9.880064 GTAGTAGTTTTTCATTTTTGAGAGTCC 57.120 33.333 0.00 0.00 0.00 3.85
406 407 9.582223 CGTAGTAGTTTTTCATTTTTGAGAGTC 57.418 33.333 0.00 0.00 0.00 3.36
407 408 9.106070 ACGTAGTAGTTTTTCATTTTTGAGAGT 57.894 29.630 0.00 0.00 41.94 3.24
510 511 2.739704 CGTGTTCGACGCCATGCAT 61.740 57.895 0.00 0.00 42.21 3.96
524 525 4.003788 CGCCCACCTTCTCCGTGT 62.004 66.667 0.00 0.00 0.00 4.49
525 526 3.530910 AACGCCCACCTTCTCCGTG 62.531 63.158 0.00 0.00 31.92 4.94
554 562 1.152419 TCCGTCTCCAAGGACACCA 60.152 57.895 0.00 0.00 36.12 4.17
562 570 2.095461 CACTCTCATCTCCGTCTCCAA 58.905 52.381 0.00 0.00 0.00 3.53
719 728 3.262405 TCCTTTGCCTATGTACGGAAGTT 59.738 43.478 0.00 0.00 46.40 2.66
726 735 3.628032 GCTCCTTTCCTTTGCCTATGTAC 59.372 47.826 0.00 0.00 0.00 2.90
729 738 2.686915 CAGCTCCTTTCCTTTGCCTATG 59.313 50.000 0.00 0.00 0.00 2.23
767 776 3.740397 CACACTGGTGGCCATGCG 61.740 66.667 9.72 2.14 41.45 4.73
780 789 0.470766 TAAGGGGTCCACACACACAC 59.529 55.000 0.00 0.00 0.00 3.82
781 790 1.349688 GATAAGGGGTCCACACACACA 59.650 52.381 0.00 0.00 0.00 3.72
840 849 4.208253 CGTATATGTAACGACAATGCAGCA 59.792 41.667 0.00 0.00 42.90 4.41
855 864 2.500098 AGTCTGTGCCAACCGTATATGT 59.500 45.455 0.00 0.00 0.00 2.29
870 881 6.109359 GCTCAACTTATATCCAACAGTCTGT 58.891 40.000 0.00 0.00 0.00 3.41
878 889 5.191722 AGGGTTCTGCTCAACTTATATCCAA 59.808 40.000 0.00 0.00 0.00 3.53
944 962 6.806751 ACGTTGAAGCTAAGCTATATCTTCA 58.193 36.000 13.29 13.29 38.25 3.02
1007 1032 2.315925 AGTAACGCATGACATGAGGG 57.684 50.000 19.76 9.44 34.14 4.30
1050 1075 0.250338 GTTGCCGAGAAACCTCTGGT 60.250 55.000 0.00 0.00 37.65 4.00
1110 1135 2.234300 TGGTTAAGCCGATTCGGATC 57.766 50.000 28.68 11.76 44.45 3.36
1249 1274 2.681706 CCTAGATCGCGATTGCTTGAT 58.318 47.619 24.55 0.00 39.65 2.57
1301 1455 4.017808 ACTAGTCTGGCATTACGAGAACT 58.982 43.478 14.27 0.00 34.60 3.01
1302 1456 4.373348 ACTAGTCTGGCATTACGAGAAC 57.627 45.455 14.27 0.00 34.60 3.01
1303 1457 5.416639 TGTTACTAGTCTGGCATTACGAGAA 59.583 40.000 14.27 4.98 34.60 2.87
1304 1458 4.945543 TGTTACTAGTCTGGCATTACGAGA 59.054 41.667 14.27 0.00 0.00 4.04
1305 1459 5.163642 ACTGTTACTAGTCTGGCATTACGAG 60.164 44.000 0.00 8.15 0.00 4.18
1306 1460 4.703575 ACTGTTACTAGTCTGGCATTACGA 59.296 41.667 0.00 0.00 0.00 3.43
1307 1461 4.995124 ACTGTTACTAGTCTGGCATTACG 58.005 43.478 0.00 0.00 0.00 3.18
1308 1462 5.063564 GCAACTGTTACTAGTCTGGCATTAC 59.936 44.000 0.00 0.00 0.00 1.89
1309 1463 5.175859 GCAACTGTTACTAGTCTGGCATTA 58.824 41.667 0.00 0.00 0.00 1.90
1310 1464 4.003648 GCAACTGTTACTAGTCTGGCATT 58.996 43.478 0.00 0.00 0.00 3.56
1311 1465 3.007940 TGCAACTGTTACTAGTCTGGCAT 59.992 43.478 0.00 0.00 31.58 4.40
1312 1466 2.367241 TGCAACTGTTACTAGTCTGGCA 59.633 45.455 0.00 0.00 33.03 4.92
1313 1467 2.996621 CTGCAACTGTTACTAGTCTGGC 59.003 50.000 0.00 0.00 0.00 4.85
1314 1468 3.990469 CACTGCAACTGTTACTAGTCTGG 59.010 47.826 0.00 0.00 0.00 3.86
1315 1469 4.871513 TCACTGCAACTGTTACTAGTCTG 58.128 43.478 0.00 0.00 0.00 3.51
1316 1470 5.069251 AGTTCACTGCAACTGTTACTAGTCT 59.931 40.000 0.00 0.00 35.18 3.24
1317 1471 5.290386 AGTTCACTGCAACTGTTACTAGTC 58.710 41.667 0.00 0.00 35.18 2.59
1318 1472 5.277857 AGTTCACTGCAACTGTTACTAGT 57.722 39.130 0.00 0.00 35.18 2.57
1319 1473 6.678878 TCTAGTTCACTGCAACTGTTACTAG 58.321 40.000 14.07 14.07 37.20 2.57
1320 1474 6.489022 TCTCTAGTTCACTGCAACTGTTACTA 59.511 38.462 0.00 0.00 37.20 1.82
1321 1475 5.302059 TCTCTAGTTCACTGCAACTGTTACT 59.698 40.000 0.00 0.00 37.20 2.24
1322 1476 5.529791 TCTCTAGTTCACTGCAACTGTTAC 58.470 41.667 0.00 0.00 37.20 2.50
1323 1477 5.784578 TCTCTAGTTCACTGCAACTGTTA 57.215 39.130 0.00 0.00 37.20 2.41
1324 1478 4.672587 TCTCTAGTTCACTGCAACTGTT 57.327 40.909 0.00 0.00 37.20 3.16
1325 1479 4.672587 TTCTCTAGTTCACTGCAACTGT 57.327 40.909 0.00 0.00 37.20 3.55
1326 1480 5.468072 ACATTTCTCTAGTTCACTGCAACTG 59.532 40.000 0.00 0.00 37.20 3.16
1327 1481 5.615289 ACATTTCTCTAGTTCACTGCAACT 58.385 37.500 0.00 0.00 39.94 3.16
1328 1482 5.931441 ACATTTCTCTAGTTCACTGCAAC 57.069 39.130 0.00 0.00 0.00 4.17
1493 1684 9.574516 TGTCACATAGTATGATGTAGATACAGT 57.425 33.333 17.13 0.00 37.99 3.55
1621 1818 2.889852 CCCGCCTTACTAGAAACTCAC 58.110 52.381 0.00 0.00 0.00 3.51
1637 1834 4.886247 TTAAAATATGTGTAGTGCCCGC 57.114 40.909 0.00 0.00 0.00 6.13
1661 1858 2.622942 AGTCACATGCATTTTTCACGGT 59.377 40.909 0.00 0.00 0.00 4.83
1745 2262 9.981114 CATAGATAAAACCAAAAGGAAACAACT 57.019 29.630 0.00 0.00 0.00 3.16
1822 2340 4.648762 TCATCTCAAACAACAACCCAACAT 59.351 37.500 0.00 0.00 0.00 2.71
1944 2491 5.750352 TTAACGTGGAATAAGAACTCCCT 57.250 39.130 0.00 0.00 0.00 4.20
1965 2512 7.168469 GTGTTATAGCAACAATTTCACGGTTTT 59.832 33.333 0.00 0.00 31.20 2.43
1980 2527 2.935849 CGCCATGTGAGTGTTATAGCAA 59.064 45.455 0.00 0.00 0.00 3.91
2003 2550 4.497340 GGTGAACAAGCGAAAACTTCATGA 60.497 41.667 0.00 0.00 0.00 3.07
2041 2588 0.887387 AAAAACTAAGCGGGCGAGCA 60.887 50.000 6.37 0.00 40.15 4.26
2585 3142 5.221722 GGAATGACCTTGCATAGTAGGATGA 60.222 44.000 9.19 0.00 35.45 2.92
2595 3152 6.211184 TGAAAGTTTATGGAATGACCTTGCAT 59.789 34.615 3.21 3.21 46.38 3.96
2655 3213 5.350504 TTCTTCTAGCAATTCTCCAGGAG 57.649 43.478 10.70 10.70 0.00 3.69
2670 3228 7.726291 TGTTGGGTATTGGTGATTTTTCTTCTA 59.274 33.333 0.00 0.00 0.00 2.10
2704 3262 2.009774 CCAGGGTCAGAACTAATTGCG 58.990 52.381 0.00 0.00 0.00 4.85
2716 3274 1.295020 CTGGTAATTCCCCAGGGTCA 58.705 55.000 4.22 0.00 44.77 4.02
3110 3680 4.183865 CAGGAAATGCTATGACTTCGTCA 58.816 43.478 0.00 0.00 46.90 4.35
3181 3751 4.460382 CCTCTGCATCCTTCTCTATCTCTC 59.540 50.000 0.00 0.00 0.00 3.20
3361 4194 6.683974 ACATGTAATTAAGCAGTGTCATCC 57.316 37.500 0.00 0.00 0.00 3.51
3371 4204 8.755696 TCATTGAACCAAACATGTAATTAAGC 57.244 30.769 0.00 0.00 0.00 3.09
3381 4214 4.321899 CGACCCATTCATTGAACCAAACAT 60.322 41.667 0.15 0.00 0.00 2.71
3459 4295 8.555166 TTATGTTCTTGTGTTTTTAGAAAGCG 57.445 30.769 0.00 0.00 30.37 4.68
3647 4492 5.030874 GTGAATTACGAGACCAAGGTTTG 57.969 43.478 0.00 0.00 0.00 2.93
3782 4627 9.438228 TTTCATTCAATGATGCACATTATGTTT 57.562 25.926 0.00 0.00 46.01 2.83
3911 4756 3.495100 GGCCAATCATCCTCATACTTCGT 60.495 47.826 0.00 0.00 0.00 3.85
3913 4758 4.090761 TGGCCAATCATCCTCATACTTC 57.909 45.455 0.61 0.00 0.00 3.01
3946 4797 1.264749 TAACACCGGCCTCTGCATCT 61.265 55.000 0.00 0.00 40.13 2.90
4017 4870 9.825972 CCAAGCCACGTGAAAATATATAATTAG 57.174 33.333 19.30 0.00 0.00 1.73
4083 4936 8.795513 ACACATGAATGAATTACATGAAGACAA 58.204 29.630 12.24 0.00 42.41 3.18
4197 5054 4.278419 GGATTTCGGTCATTGGATTAAGGG 59.722 45.833 0.00 0.00 0.00 3.95
4263 5120 4.704540 TGCAAAAATGAACGGTGAGGATAT 59.295 37.500 0.00 0.00 0.00 1.63
4331 5189 7.740519 AGTTTCGAGTTCAAATGTTCTTTTG 57.259 32.000 5.26 5.26 37.83 2.44
4605 5468 0.928451 GTTTGCGTCAAGGTTCGTGC 60.928 55.000 0.00 0.00 0.00 5.34
4630 5493 9.067986 CATACCAGTGTATCATCTACTTAGACA 57.932 37.037 0.00 0.00 35.46 3.41
4960 5838 7.582435 AATCAACACGTGTCTCTAACTAATG 57.418 36.000 23.61 12.31 0.00 1.90
4961 5839 8.088981 AGAAATCAACACGTGTCTCTAACTAAT 58.911 33.333 23.61 0.00 0.00 1.73
4962 5840 7.381408 CAGAAATCAACACGTGTCTCTAACTAA 59.619 37.037 23.61 0.00 0.00 2.24
4968 5846 4.038042 TCTCAGAAATCAACACGTGTCTCT 59.962 41.667 23.61 15.08 0.00 3.10
5012 5890 3.715495 CTCTATGCATGTCTCACAGTCC 58.285 50.000 10.16 0.00 0.00 3.85
5013 5891 3.122297 GCTCTATGCATGTCTCACAGTC 58.878 50.000 10.16 0.00 42.31 3.51
5118 5996 4.960938 TCTAATGCCATTGAGCGTAAGAT 58.039 39.130 0.00 0.00 43.02 2.40
5122 6000 4.058124 GACATCTAATGCCATTGAGCGTA 58.942 43.478 0.00 0.00 34.65 4.42
5124 6002 2.874086 TGACATCTAATGCCATTGAGCG 59.126 45.455 0.00 0.00 34.65 5.03
5178 6056 8.974060 AAAACTAGAGTTCACTCCACATTTTA 57.026 30.769 3.20 0.00 43.88 1.52
5288 6179 9.947669 CCTGCTAGATCATTCTCAAAAATTTAG 57.052 33.333 0.00 0.00 33.17 1.85
5346 6237 3.385111 CCGGTCTGACTAAGCCTTTCTAT 59.615 47.826 7.85 0.00 0.00 1.98
5403 6301 2.586425 AGTTGCCTAGTTGCACAATGT 58.414 42.857 0.00 0.00 41.88 2.71
5436 6334 1.745489 GACCCACCTCATGAACCGC 60.745 63.158 0.00 0.00 0.00 5.68
5449 6347 2.305052 TCTCGTCTCTGAGTTAGACCCA 59.695 50.000 4.32 0.00 40.24 4.51
5455 6353 3.752665 ACCAGTTCTCGTCTCTGAGTTA 58.247 45.455 4.32 0.00 37.28 2.24
5482 6380 5.633601 GTGCTACCTTTTGCATTTTTCTACC 59.366 40.000 0.00 0.00 41.45 3.18
5528 6427 0.831307 GTGATCTGGTAGGTGGGTCC 59.169 60.000 0.00 0.00 0.00 4.46
5957 6860 1.232119 CAAGCCTGCATGCATCGATA 58.768 50.000 22.97 0.00 0.00 2.92
6008 6911 9.095065 GTATTTTCTAACATAGAACGTGGACAT 57.905 33.333 0.00 0.00 43.96 3.06
6016 6919 8.044908 TGTCCCCTGTATTTTCTAACATAGAAC 58.955 37.037 0.00 0.00 43.96 3.01
6035 6938 2.644798 AGAAACTATGCTTGTGTCCCCT 59.355 45.455 0.00 0.00 0.00 4.79
6060 6963 6.109156 TCATGTATGTTTCGGTATAGCCAT 57.891 37.500 0.00 0.00 36.97 4.40
6108 7011 5.680619 TCTGGACAACAAAGAAGAAAGCTA 58.319 37.500 0.00 0.00 0.00 3.32
6174 7077 2.025887 AGGGCCTGTGGAATTCTACTTG 60.026 50.000 20.91 13.35 0.00 3.16
6190 7093 2.197465 TCCCTCTCTAAAAGAAGGGCC 58.803 52.381 14.45 0.00 39.96 5.80
6276 7179 6.214177 AGAGAAGTCCAAAATTTAGGGGAA 57.786 37.500 7.50 0.00 0.00 3.97
6288 7191 2.492484 GACGAGGCTTAGAGAAGTCCAA 59.508 50.000 0.00 0.00 38.10 3.53
6336 7239 3.861341 GCTCCAAGCATCCACACTA 57.139 52.632 0.00 0.00 41.89 2.74
6369 7272 9.935241 AACATACTAAGCCATGTGATAATCTAG 57.065 33.333 0.00 0.00 35.59 2.43
6371 7274 8.213679 ACAACATACTAAGCCATGTGATAATCT 58.786 33.333 0.00 0.00 35.59 2.40
6400 7303 8.149647 TGAATTGCAAAGATGAACAAGGTAAAT 58.850 29.630 1.71 0.00 0.00 1.40
6486 7397 4.430137 AGATAATGCAGCTTGTGTTGTG 57.570 40.909 0.00 0.00 0.00 3.33
6652 7564 8.125978 TGGTTTTCTAGAATTCATCAAAGCAT 57.874 30.769 5.89 0.00 28.62 3.79
6675 7587 9.408648 ACTGTAATTTTATTGGAGGAACTATGG 57.591 33.333 0.00 0.00 41.55 2.74
6739 7652 1.541233 CCTGATACCCATCGTTGGAGC 60.541 57.143 14.27 0.00 46.92 4.70
6821 7734 4.113815 CTGAGCAATCCCCCGCCA 62.114 66.667 0.00 0.00 0.00 5.69
6826 7739 1.772836 ATCAAAGCTGAGCAATCCCC 58.227 50.000 7.39 0.00 34.23 4.81
6838 7752 3.375782 AGTCTTGTTGCCAATCAAAGC 57.624 42.857 0.00 0.00 36.26 3.51


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.