Multiple sequence alignment - TraesCS2B01G336200
BLAST Results
Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.
qseqid | sseqid | percentage.identical | alignment.length | no.mismatch | no.gap.openings | qstart | qend | sstart | send | evalue | bitscore | |
---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS2B01G336200 | chr2B | 100.000 | 4523 | 0 | 0 | 1 | 4523 | 480407514 | 480412036 | 0.000000e+00 | 8353 |
1 | TraesCS2B01G336200 | chr2B | 96.000 | 100 | 4 | 0 | 2272 | 2371 | 58672881 | 58672782 | 3.620000e-36 | 163 |
2 | TraesCS2B01G336200 | chr2B | 94.845 | 97 | 5 | 0 | 2275 | 2371 | 265421874 | 265421970 | 7.840000e-33 | 152 |
3 | TraesCS2B01G336200 | chr2B | 87.500 | 112 | 10 | 4 | 1850 | 1960 | 27637827 | 27637935 | 4.750000e-25 | 126 |
4 | TraesCS2B01G336200 | chr2D | 92.585 | 2495 | 130 | 27 | 2054 | 4523 | 405273080 | 405275544 | 0.000000e+00 | 3531 |
5 | TraesCS2B01G336200 | chr2D | 89.224 | 928 | 59 | 15 | 941 | 1862 | 405272118 | 405273010 | 0.000000e+00 | 1122 |
6 | TraesCS2B01G336200 | chr2D | 87.500 | 640 | 51 | 18 | 269 | 886 | 13187595 | 13188227 | 0.000000e+00 | 712 |
7 | TraesCS2B01G336200 | chr2D | 96.000 | 100 | 4 | 0 | 2272 | 2371 | 28604876 | 28604975 | 3.620000e-36 | 163 |
8 | TraesCS2B01G336200 | chr2D | 95.833 | 96 | 4 | 0 | 2274 | 2369 | 35508233 | 35508138 | 6.060000e-34 | 156 |
9 | TraesCS2B01G336200 | chr2A | 93.742 | 1662 | 83 | 9 | 2083 | 3742 | 543305362 | 543307004 | 0.000000e+00 | 2473 |
10 | TraesCS2B01G336200 | chr2A | 91.931 | 979 | 49 | 9 | 920 | 1894 | 543304412 | 543305364 | 0.000000e+00 | 1343 |
11 | TraesCS2B01G336200 | chr2A | 89.381 | 452 | 20 | 12 | 4091 | 4523 | 543307642 | 543308084 | 1.110000e-150 | 544 |
12 | TraesCS2B01G336200 | chr2A | 85.612 | 278 | 26 | 7 | 3830 | 4095 | 543307220 | 543307495 | 3.450000e-71 | 279 |
13 | TraesCS2B01G336200 | chr2A | 95.833 | 96 | 4 | 0 | 2274 | 2369 | 38597848 | 38597753 | 6.060000e-34 | 156 |
14 | TraesCS2B01G336200 | chr2A | 88.991 | 109 | 8 | 4 | 2249 | 2357 | 43301884 | 43301988 | 1.020000e-26 | 132 |
15 | TraesCS2B01G336200 | chr3D | 87.019 | 701 | 67 | 15 | 207 | 886 | 316818775 | 316818078 | 0.000000e+00 | 769 |
16 | TraesCS2B01G336200 | chr5D | 89.574 | 470 | 47 | 2 | 204 | 672 | 544411729 | 544412197 | 3.010000e-166 | 595 |
17 | TraesCS2B01G336200 | chr5D | 93.878 | 98 | 5 | 1 | 1864 | 1960 | 139441012 | 139440915 | 3.650000e-31 | 147 |
18 | TraesCS2B01G336200 | chr5D | 91.429 | 105 | 8 | 1 | 1863 | 1966 | 443258101 | 443258205 | 4.720000e-30 | 143 |
19 | TraesCS2B01G336200 | chr3B | 84.185 | 626 | 76 | 14 | 282 | 887 | 118514363 | 118514985 | 1.810000e-163 | 586 |
20 | TraesCS2B01G336200 | chr6A | 86.750 | 400 | 30 | 14 | 508 | 887 | 19863337 | 19863733 | 1.500000e-114 | 424 |
21 | TraesCS2B01G336200 | chr6A | 86.957 | 184 | 24 | 0 | 207 | 390 | 19863136 | 19863319 | 1.650000e-49 | 207 |
22 | TraesCS2B01G336200 | chr5B | 94.059 | 101 | 5 | 1 | 1861 | 1960 | 166379083 | 166379183 | 7.840000e-33 | 152 |
23 | TraesCS2B01G336200 | chr5B | 93.069 | 101 | 6 | 1 | 2271 | 2371 | 403176052 | 403175953 | 3.650000e-31 | 147 |
24 | TraesCS2B01G336200 | chr6B | 94.845 | 97 | 4 | 1 | 2274 | 2370 | 643078946 | 643078851 | 2.820000e-32 | 150 |
25 | TraesCS2B01G336200 | chr5A | 92.453 | 106 | 7 | 1 | 1862 | 1966 | 580464515 | 580464410 | 2.820000e-32 | 150 |
26 | TraesCS2B01G336200 | chr7B | 90.826 | 109 | 8 | 2 | 1859 | 1965 | 162120913 | 162120805 | 1.310000e-30 | 145 |
27 | TraesCS2B01G336200 | chr7B | 90.476 | 105 | 8 | 2 | 1857 | 1960 | 632337877 | 632337774 | 2.190000e-28 | 137 |
28 | TraesCS2B01G336200 | chr3A | 90.654 | 107 | 9 | 1 | 1861 | 1966 | 470095679 | 470095785 | 1.700000e-29 | 141 |
29 | TraesCS2B01G336200 | chr1D | 92.784 | 97 | 6 | 1 | 1864 | 1959 | 226457716 | 226457620 | 6.100000e-29 | 139 |
These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.
query | scaffold | start | end | length | rev.comp | avg.bitscore | max.bitscore | avg.percent.identical | query.start | query.end | num_hsp | groupid | homo_length | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS2B01G336200 | chr2B | 480407514 | 480412036 | 4522 | False | 8353.00 | 8353 | 100.0000 | 1 | 4523 | 1 | chr2B.!!$F3 | 4522 |
1 | TraesCS2B01G336200 | chr2D | 405272118 | 405275544 | 3426 | False | 2326.50 | 3531 | 90.9045 | 941 | 4523 | 2 | chr2D.!!$F3 | 3582 |
2 | TraesCS2B01G336200 | chr2D | 13187595 | 13188227 | 632 | False | 712.00 | 712 | 87.5000 | 269 | 886 | 1 | chr2D.!!$F1 | 617 |
3 | TraesCS2B01G336200 | chr2A | 543304412 | 543308084 | 3672 | False | 1159.75 | 2473 | 90.1665 | 920 | 4523 | 4 | chr2A.!!$F2 | 3603 |
4 | TraesCS2B01G336200 | chr3D | 316818078 | 316818775 | 697 | True | 769.00 | 769 | 87.0190 | 207 | 886 | 1 | chr3D.!!$R1 | 679 |
5 | TraesCS2B01G336200 | chr3B | 118514363 | 118514985 | 622 | False | 586.00 | 586 | 84.1850 | 282 | 887 | 1 | chr3B.!!$F1 | 605 |
6 | TraesCS2B01G336200 | chr6A | 19863136 | 19863733 | 597 | False | 315.50 | 424 | 86.8535 | 207 | 887 | 2 | chr6A.!!$F1 | 680 |
AutoCloner calculated primer pairsThese primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
961 | 980 | 0.109458 | CACTGCTACTACGGCGTCAA | 60.109 | 55.000 | 19.21 | 0.00 | 0.0 | 3.18 | F |
1405 | 1427 | 1.135228 | TGATTGCGCTGCGTAGTTAGA | 60.135 | 47.619 | 24.04 | 3.72 | 0.0 | 2.10 | F |
2168 | 2219 | 0.029834 | GCTGTGCCATCTTATTGCCG | 59.970 | 55.000 | 0.00 | 0.00 | 0.0 | 5.69 | F |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
1942 | 1993 | 0.032515 | TGCTACTCCCTCCGATCCAA | 60.033 | 55.0 | 0.00 | 0.0 | 0.00 | 3.53 | R |
3111 | 3172 | 0.038021 | TAACAAGCTGGCTGGCATCA | 59.962 | 50.0 | 3.74 | 0.0 | 34.17 | 3.07 | R |
4040 | 4251 | 0.037326 | TGAAGTGTGACCGATCAGGC | 60.037 | 55.0 | 3.85 | 0.0 | 46.52 | 4.85 | R |
All possible primersListed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
18 | 19 | 2.400024 | AGGGAAGAGACGGAGAGGA | 58.600 | 57.895 | 0.00 | 0.00 | 0.00 | 3.71 |
19 | 20 | 0.930726 | AGGGAAGAGACGGAGAGGAT | 59.069 | 55.000 | 0.00 | 0.00 | 0.00 | 3.24 |
20 | 21 | 1.289530 | AGGGAAGAGACGGAGAGGATT | 59.710 | 52.381 | 0.00 | 0.00 | 0.00 | 3.01 |
21 | 22 | 2.112190 | GGGAAGAGACGGAGAGGATTT | 58.888 | 52.381 | 0.00 | 0.00 | 0.00 | 2.17 |
22 | 23 | 2.159028 | GGGAAGAGACGGAGAGGATTTG | 60.159 | 54.545 | 0.00 | 0.00 | 0.00 | 2.32 |
23 | 24 | 2.159028 | GGAAGAGACGGAGAGGATTTGG | 60.159 | 54.545 | 0.00 | 0.00 | 0.00 | 3.28 |
24 | 25 | 1.490574 | AGAGACGGAGAGGATTTGGG | 58.509 | 55.000 | 0.00 | 0.00 | 0.00 | 4.12 |
25 | 26 | 1.007238 | AGAGACGGAGAGGATTTGGGA | 59.993 | 52.381 | 0.00 | 0.00 | 0.00 | 4.37 |
26 | 27 | 1.410882 | GAGACGGAGAGGATTTGGGAG | 59.589 | 57.143 | 0.00 | 0.00 | 0.00 | 4.30 |
27 | 28 | 0.179070 | GACGGAGAGGATTTGGGAGC | 60.179 | 60.000 | 0.00 | 0.00 | 0.00 | 4.70 |
28 | 29 | 0.618968 | ACGGAGAGGATTTGGGAGCT | 60.619 | 55.000 | 0.00 | 0.00 | 0.00 | 4.09 |
29 | 30 | 1.343075 | ACGGAGAGGATTTGGGAGCTA | 60.343 | 52.381 | 0.00 | 0.00 | 0.00 | 3.32 |
30 | 31 | 1.974236 | CGGAGAGGATTTGGGAGCTAT | 59.026 | 52.381 | 0.00 | 0.00 | 0.00 | 2.97 |
31 | 32 | 2.289320 | CGGAGAGGATTTGGGAGCTATG | 60.289 | 54.545 | 0.00 | 0.00 | 0.00 | 2.23 |
32 | 33 | 2.039613 | GGAGAGGATTTGGGAGCTATGG | 59.960 | 54.545 | 0.00 | 0.00 | 0.00 | 2.74 |
33 | 34 | 2.708325 | GAGAGGATTTGGGAGCTATGGT | 59.292 | 50.000 | 0.00 | 0.00 | 0.00 | 3.55 |
34 | 35 | 2.441001 | AGAGGATTTGGGAGCTATGGTG | 59.559 | 50.000 | 0.00 | 0.00 | 0.00 | 4.17 |
35 | 36 | 2.173569 | GAGGATTTGGGAGCTATGGTGT | 59.826 | 50.000 | 0.00 | 0.00 | 0.00 | 4.16 |
36 | 37 | 2.582636 | AGGATTTGGGAGCTATGGTGTT | 59.417 | 45.455 | 0.00 | 0.00 | 0.00 | 3.32 |
37 | 38 | 3.011708 | AGGATTTGGGAGCTATGGTGTTT | 59.988 | 43.478 | 0.00 | 0.00 | 0.00 | 2.83 |
38 | 39 | 4.229582 | AGGATTTGGGAGCTATGGTGTTTA | 59.770 | 41.667 | 0.00 | 0.00 | 0.00 | 2.01 |
39 | 40 | 4.580580 | GGATTTGGGAGCTATGGTGTTTAG | 59.419 | 45.833 | 0.00 | 0.00 | 0.00 | 1.85 |
40 | 41 | 4.650972 | TTTGGGAGCTATGGTGTTTAGT | 57.349 | 40.909 | 0.00 | 0.00 | 0.00 | 2.24 |
41 | 42 | 3.627395 | TGGGAGCTATGGTGTTTAGTG | 57.373 | 47.619 | 0.00 | 0.00 | 0.00 | 2.74 |
42 | 43 | 3.178046 | TGGGAGCTATGGTGTTTAGTGA | 58.822 | 45.455 | 0.00 | 0.00 | 0.00 | 3.41 |
43 | 44 | 3.197766 | TGGGAGCTATGGTGTTTAGTGAG | 59.802 | 47.826 | 0.00 | 0.00 | 0.00 | 3.51 |
44 | 45 | 3.432326 | GGGAGCTATGGTGTTTAGTGAGG | 60.432 | 52.174 | 0.00 | 0.00 | 0.00 | 3.86 |
45 | 46 | 3.451178 | GGAGCTATGGTGTTTAGTGAGGA | 59.549 | 47.826 | 0.00 | 0.00 | 0.00 | 3.71 |
46 | 47 | 4.081087 | GGAGCTATGGTGTTTAGTGAGGAA | 60.081 | 45.833 | 0.00 | 0.00 | 0.00 | 3.36 |
47 | 48 | 5.396884 | GGAGCTATGGTGTTTAGTGAGGAAT | 60.397 | 44.000 | 0.00 | 0.00 | 0.00 | 3.01 |
48 | 49 | 6.183360 | GGAGCTATGGTGTTTAGTGAGGAATA | 60.183 | 42.308 | 0.00 | 0.00 | 0.00 | 1.75 |
49 | 50 | 7.380423 | AGCTATGGTGTTTAGTGAGGAATAT | 57.620 | 36.000 | 0.00 | 0.00 | 0.00 | 1.28 |
50 | 51 | 7.220030 | AGCTATGGTGTTTAGTGAGGAATATG | 58.780 | 38.462 | 0.00 | 0.00 | 0.00 | 1.78 |
51 | 52 | 7.071196 | AGCTATGGTGTTTAGTGAGGAATATGA | 59.929 | 37.037 | 0.00 | 0.00 | 0.00 | 2.15 |
52 | 53 | 7.386299 | GCTATGGTGTTTAGTGAGGAATATGAG | 59.614 | 40.741 | 0.00 | 0.00 | 0.00 | 2.90 |
53 | 54 | 5.989477 | TGGTGTTTAGTGAGGAATATGAGG | 58.011 | 41.667 | 0.00 | 0.00 | 0.00 | 3.86 |
54 | 55 | 5.487488 | TGGTGTTTAGTGAGGAATATGAGGT | 59.513 | 40.000 | 0.00 | 0.00 | 0.00 | 3.85 |
55 | 56 | 6.012858 | TGGTGTTTAGTGAGGAATATGAGGTT | 60.013 | 38.462 | 0.00 | 0.00 | 0.00 | 3.50 |
56 | 57 | 7.181305 | TGGTGTTTAGTGAGGAATATGAGGTTA | 59.819 | 37.037 | 0.00 | 0.00 | 0.00 | 2.85 |
57 | 58 | 8.211629 | GGTGTTTAGTGAGGAATATGAGGTTAT | 58.788 | 37.037 | 0.00 | 0.00 | 0.00 | 1.89 |
58 | 59 | 9.046296 | GTGTTTAGTGAGGAATATGAGGTTATG | 57.954 | 37.037 | 0.00 | 0.00 | 0.00 | 1.90 |
59 | 60 | 8.768397 | TGTTTAGTGAGGAATATGAGGTTATGT | 58.232 | 33.333 | 0.00 | 0.00 | 0.00 | 2.29 |
60 | 61 | 9.614792 | GTTTAGTGAGGAATATGAGGTTATGTT | 57.385 | 33.333 | 0.00 | 0.00 | 0.00 | 2.71 |
61 | 62 | 9.832445 | TTTAGTGAGGAATATGAGGTTATGTTC | 57.168 | 33.333 | 0.00 | 0.00 | 0.00 | 3.18 |
62 | 63 | 7.682787 | AGTGAGGAATATGAGGTTATGTTCT | 57.317 | 36.000 | 0.00 | 0.00 | 31.32 | 3.01 |
63 | 64 | 8.095452 | AGTGAGGAATATGAGGTTATGTTCTT | 57.905 | 34.615 | 0.00 | 0.00 | 31.32 | 2.52 |
64 | 65 | 8.552296 | AGTGAGGAATATGAGGTTATGTTCTTT | 58.448 | 33.333 | 0.00 | 0.00 | 31.32 | 2.52 |
65 | 66 | 9.178758 | GTGAGGAATATGAGGTTATGTTCTTTT | 57.821 | 33.333 | 0.00 | 0.00 | 31.32 | 2.27 |
74 | 75 | 8.458573 | TGAGGTTATGTTCTTTTACACAATGT | 57.541 | 30.769 | 0.00 | 0.00 | 0.00 | 2.71 |
75 | 76 | 8.908903 | TGAGGTTATGTTCTTTTACACAATGTT | 58.091 | 29.630 | 0.00 | 0.00 | 0.00 | 2.71 |
76 | 77 | 9.744468 | GAGGTTATGTTCTTTTACACAATGTTT | 57.256 | 29.630 | 0.00 | 0.00 | 0.00 | 2.83 |
77 | 78 | 9.744468 | AGGTTATGTTCTTTTACACAATGTTTC | 57.256 | 29.630 | 0.00 | 0.00 | 0.00 | 2.78 |
78 | 79 | 9.744468 | GGTTATGTTCTTTTACACAATGTTTCT | 57.256 | 29.630 | 0.00 | 0.00 | 0.00 | 2.52 |
82 | 83 | 9.651913 | ATGTTCTTTTACACAATGTTTCTTGTT | 57.348 | 25.926 | 0.00 | 0.00 | 37.25 | 2.83 |
83 | 84 | 9.482627 | TGTTCTTTTACACAATGTTTCTTGTTT | 57.517 | 25.926 | 0.00 | 0.00 | 37.25 | 2.83 |
112 | 113 | 7.433537 | TTTTTGAACTGGGGTTATGGTTAAA | 57.566 | 32.000 | 0.00 | 0.00 | 35.58 | 1.52 |
113 | 114 | 6.658188 | TTTGAACTGGGGTTATGGTTAAAG | 57.342 | 37.500 | 0.00 | 0.00 | 35.58 | 1.85 |
114 | 115 | 5.327737 | TGAACTGGGGTTATGGTTAAAGT | 57.672 | 39.130 | 0.00 | 0.00 | 35.58 | 2.66 |
115 | 116 | 5.707495 | TGAACTGGGGTTATGGTTAAAGTT | 58.293 | 37.500 | 0.00 | 0.00 | 35.58 | 2.66 |
116 | 117 | 5.536916 | TGAACTGGGGTTATGGTTAAAGTTG | 59.463 | 40.000 | 0.00 | 0.00 | 35.58 | 3.16 |
117 | 118 | 3.830178 | ACTGGGGTTATGGTTAAAGTTGC | 59.170 | 43.478 | 0.00 | 0.00 | 0.00 | 4.17 |
118 | 119 | 4.086457 | CTGGGGTTATGGTTAAAGTTGCT | 58.914 | 43.478 | 0.00 | 0.00 | 0.00 | 3.91 |
119 | 120 | 4.083565 | TGGGGTTATGGTTAAAGTTGCTC | 58.916 | 43.478 | 0.00 | 0.00 | 0.00 | 4.26 |
120 | 121 | 4.202631 | TGGGGTTATGGTTAAAGTTGCTCT | 60.203 | 41.667 | 0.00 | 0.00 | 0.00 | 4.09 |
121 | 122 | 5.014333 | TGGGGTTATGGTTAAAGTTGCTCTA | 59.986 | 40.000 | 0.00 | 0.00 | 0.00 | 2.43 |
122 | 123 | 5.947566 | GGGGTTATGGTTAAAGTTGCTCTAA | 59.052 | 40.000 | 0.00 | 0.00 | 0.00 | 2.10 |
123 | 124 | 6.127814 | GGGGTTATGGTTAAAGTTGCTCTAAC | 60.128 | 42.308 | 0.00 | 0.00 | 39.65 | 2.34 |
124 | 125 | 6.402875 | GGGTTATGGTTAAAGTTGCTCTAACG | 60.403 | 42.308 | 0.00 | 0.00 | 44.15 | 3.18 |
125 | 126 | 6.148315 | GGTTATGGTTAAAGTTGCTCTAACGT | 59.852 | 38.462 | 0.00 | 0.00 | 44.15 | 3.99 |
126 | 127 | 5.857822 | ATGGTTAAAGTTGCTCTAACGTC | 57.142 | 39.130 | 0.00 | 0.00 | 44.15 | 4.34 |
127 | 128 | 3.737266 | TGGTTAAAGTTGCTCTAACGTCG | 59.263 | 43.478 | 0.00 | 0.00 | 44.15 | 5.12 |
128 | 129 | 3.422732 | GGTTAAAGTTGCTCTAACGTCGC | 60.423 | 47.826 | 0.00 | 0.00 | 44.15 | 5.19 |
129 | 130 | 1.860676 | AAAGTTGCTCTAACGTCGCA | 58.139 | 45.000 | 0.00 | 0.00 | 44.15 | 5.10 |
130 | 131 | 1.137513 | AAGTTGCTCTAACGTCGCAC | 58.862 | 50.000 | 0.00 | 0.00 | 44.15 | 5.34 |
140 | 141 | 2.052590 | CGTCGCACGTTGTTTGGG | 60.053 | 61.111 | 0.00 | 0.00 | 36.74 | 4.12 |
141 | 142 | 2.353030 | GTCGCACGTTGTTTGGGC | 60.353 | 61.111 | 0.00 | 0.00 | 0.00 | 5.36 |
142 | 143 | 3.587933 | TCGCACGTTGTTTGGGCC | 61.588 | 61.111 | 0.00 | 0.00 | 0.00 | 5.80 |
143 | 144 | 4.973360 | CGCACGTTGTTTGGGCCG | 62.973 | 66.667 | 0.00 | 0.00 | 0.00 | 6.13 |
145 | 146 | 4.639171 | CACGTTGTTTGGGCCGCC | 62.639 | 66.667 | 0.00 | 0.00 | 0.00 | 6.13 |
156 | 157 | 4.778143 | GGCCGCCCGACAACAGAT | 62.778 | 66.667 | 0.00 | 0.00 | 0.00 | 2.90 |
157 | 158 | 2.746277 | GCCGCCCGACAACAGATT | 60.746 | 61.111 | 0.00 | 0.00 | 0.00 | 2.40 |
158 | 159 | 3.039202 | GCCGCCCGACAACAGATTG | 62.039 | 63.158 | 0.00 | 0.00 | 41.98 | 2.67 |
159 | 160 | 2.480555 | CGCCCGACAACAGATTGC | 59.519 | 61.111 | 0.00 | 0.00 | 39.66 | 3.56 |
160 | 161 | 2.324330 | CGCCCGACAACAGATTGCA | 61.324 | 57.895 | 0.00 | 0.00 | 39.66 | 4.08 |
161 | 162 | 1.503542 | GCCCGACAACAGATTGCAG | 59.496 | 57.895 | 0.00 | 0.00 | 39.66 | 4.41 |
162 | 163 | 1.926511 | GCCCGACAACAGATTGCAGG | 61.927 | 60.000 | 0.00 | 0.00 | 39.66 | 4.85 |
163 | 164 | 0.321564 | CCCGACAACAGATTGCAGGA | 60.322 | 55.000 | 0.00 | 0.00 | 39.66 | 3.86 |
164 | 165 | 1.522668 | CCGACAACAGATTGCAGGAA | 58.477 | 50.000 | 0.00 | 0.00 | 39.66 | 3.36 |
165 | 166 | 1.197721 | CCGACAACAGATTGCAGGAAC | 59.802 | 52.381 | 0.00 | 0.00 | 39.66 | 3.62 |
166 | 167 | 2.146342 | CGACAACAGATTGCAGGAACT | 58.854 | 47.619 | 0.00 | 0.00 | 39.66 | 3.01 |
179 | 180 | 1.251251 | AGGAACTGCACATTTCTGGC | 58.749 | 50.000 | 1.46 | 0.00 | 37.18 | 4.85 |
180 | 181 | 0.244721 | GGAACTGCACATTTCTGGCC | 59.755 | 55.000 | 0.00 | 0.00 | 0.00 | 5.36 |
181 | 182 | 0.244721 | GAACTGCACATTTCTGGCCC | 59.755 | 55.000 | 0.00 | 0.00 | 0.00 | 5.80 |
182 | 183 | 1.187567 | AACTGCACATTTCTGGCCCC | 61.188 | 55.000 | 0.00 | 0.00 | 0.00 | 5.80 |
183 | 184 | 1.607178 | CTGCACATTTCTGGCCCCA | 60.607 | 57.895 | 0.00 | 0.00 | 0.00 | 4.96 |
184 | 185 | 1.880819 | CTGCACATTTCTGGCCCCAC | 61.881 | 60.000 | 0.00 | 0.00 | 0.00 | 4.61 |
185 | 186 | 1.907807 | GCACATTTCTGGCCCCACA | 60.908 | 57.895 | 0.00 | 0.00 | 0.00 | 4.17 |
186 | 187 | 1.470996 | GCACATTTCTGGCCCCACAA | 61.471 | 55.000 | 0.00 | 0.00 | 0.00 | 3.33 |
187 | 188 | 1.269012 | CACATTTCTGGCCCCACAAT | 58.731 | 50.000 | 0.00 | 0.00 | 0.00 | 2.71 |
188 | 189 | 2.455557 | CACATTTCTGGCCCCACAATA | 58.544 | 47.619 | 0.00 | 0.00 | 0.00 | 1.90 |
189 | 190 | 2.428171 | CACATTTCTGGCCCCACAATAG | 59.572 | 50.000 | 0.00 | 0.00 | 0.00 | 1.73 |
190 | 191 | 1.410153 | CATTTCTGGCCCCACAATAGC | 59.590 | 52.381 | 0.00 | 0.00 | 0.00 | 2.97 |
191 | 192 | 0.679640 | TTTCTGGCCCCACAATAGCG | 60.680 | 55.000 | 0.00 | 0.00 | 0.00 | 4.26 |
192 | 193 | 1.558167 | TTCTGGCCCCACAATAGCGA | 61.558 | 55.000 | 0.00 | 0.00 | 0.00 | 4.93 |
193 | 194 | 1.819632 | CTGGCCCCACAATAGCGAC | 60.820 | 63.158 | 0.00 | 0.00 | 0.00 | 5.19 |
194 | 195 | 2.895372 | GGCCCCACAATAGCGACG | 60.895 | 66.667 | 0.00 | 0.00 | 0.00 | 5.12 |
195 | 196 | 2.185867 | GCCCCACAATAGCGACGA | 59.814 | 61.111 | 0.00 | 0.00 | 0.00 | 4.20 |
196 | 197 | 2.171725 | GCCCCACAATAGCGACGAC | 61.172 | 63.158 | 0.00 | 0.00 | 0.00 | 4.34 |
197 | 198 | 1.520787 | CCCCACAATAGCGACGACC | 60.521 | 63.158 | 0.00 | 0.00 | 0.00 | 4.79 |
198 | 199 | 1.876714 | CCCACAATAGCGACGACCG | 60.877 | 63.158 | 0.00 | 0.00 | 42.21 | 4.79 |
199 | 200 | 1.153901 | CCACAATAGCGACGACCGT | 60.154 | 57.895 | 0.00 | 0.00 | 41.15 | 4.83 |
200 | 201 | 1.410737 | CCACAATAGCGACGACCGTG | 61.411 | 60.000 | 0.00 | 0.00 | 41.15 | 4.94 |
201 | 202 | 1.804326 | ACAATAGCGACGACCGTGC | 60.804 | 57.895 | 0.00 | 4.48 | 41.15 | 5.34 |
202 | 203 | 1.803922 | CAATAGCGACGACCGTGCA | 60.804 | 57.895 | 0.00 | 0.00 | 41.15 | 4.57 |
203 | 204 | 1.080366 | AATAGCGACGACCGTGCAA | 60.080 | 52.632 | 0.00 | 0.00 | 41.15 | 4.08 |
204 | 205 | 0.459585 | AATAGCGACGACCGTGCAAT | 60.460 | 50.000 | 0.00 | 3.39 | 41.15 | 3.56 |
205 | 206 | 0.382873 | ATAGCGACGACCGTGCAATA | 59.617 | 50.000 | 0.00 | 4.94 | 41.15 | 1.90 |
225 | 226 | 7.501515 | GCAATAGCATACAACTTTTGTGAAAC | 58.498 | 34.615 | 1.73 | 0.00 | 41.92 | 2.78 |
231 | 232 | 8.629158 | AGCATACAACTTTTGTGAAACTATCAA | 58.371 | 29.630 | 1.73 | 0.00 | 45.03 | 2.57 |
256 | 257 | 8.782137 | ATAATATTATTGGGAATATGGTGGGC | 57.218 | 34.615 | 1.91 | 0.00 | 33.27 | 5.36 |
267 | 268 | 5.891551 | GGAATATGGTGGGCTAGAAGAAAAA | 59.108 | 40.000 | 0.00 | 0.00 | 0.00 | 1.94 |
280 | 281 | 6.036191 | GCTAGAAGAAAAACTATTCACGAGGG | 59.964 | 42.308 | 0.00 | 0.00 | 0.00 | 4.30 |
299 | 300 | 1.387539 | GGATCTTTCAGAGCCTTGCC | 58.612 | 55.000 | 0.58 | 0.00 | 46.83 | 4.52 |
348 | 349 | 7.618019 | TTCATAAGGGAGCTAGAATACATGT | 57.382 | 36.000 | 2.69 | 2.69 | 0.00 | 3.21 |
362 | 363 | 0.745845 | ACATGTCGGGCAAGAGCATC | 60.746 | 55.000 | 0.00 | 0.00 | 44.61 | 3.91 |
375 | 376 | 4.482386 | CAAGAGCATCAAATCACCAACAG | 58.518 | 43.478 | 0.00 | 0.00 | 37.82 | 3.16 |
379 | 380 | 2.288948 | GCATCAAATCACCAACAGCCAA | 60.289 | 45.455 | 0.00 | 0.00 | 0.00 | 4.52 |
390 | 391 | 3.957497 | ACCAACAGCCAACAATGAAGTAA | 59.043 | 39.130 | 0.00 | 0.00 | 0.00 | 2.24 |
415 | 416 | 1.311747 | GACCTAGGGCTCCACCTCT | 59.688 | 63.158 | 14.81 | 0.00 | 42.09 | 3.69 |
418 | 419 | 1.581149 | ACCTAGGGCTCCACCTCTAAT | 59.419 | 52.381 | 14.81 | 0.00 | 42.09 | 1.73 |
419 | 420 | 2.795960 | ACCTAGGGCTCCACCTCTAATA | 59.204 | 50.000 | 14.81 | 0.00 | 42.09 | 0.98 |
424 | 425 | 5.734031 | AGGGCTCCACCTCTAATATTTTT | 57.266 | 39.130 | 0.00 | 0.00 | 35.43 | 1.94 |
473 | 474 | 3.490348 | CAAGGAATCAGAACAAGGGTGT | 58.510 | 45.455 | 0.00 | 0.00 | 40.75 | 4.16 |
501 | 502 | 0.940126 | CCGTCAGCATAGATGGCAAC | 59.060 | 55.000 | 0.00 | 0.00 | 37.83 | 4.17 |
514 | 515 | 3.763360 | AGATGGCAACGGAAATTTCATGA | 59.237 | 39.130 | 19.49 | 0.00 | 42.51 | 3.07 |
523 | 524 | 6.487689 | ACGGAAATTTCATGAGAAGTTCTC | 57.512 | 37.500 | 23.53 | 23.53 | 43.65 | 2.87 |
564 | 565 | 7.384115 | GGAATTAATGATGATGCAACAATGGAG | 59.616 | 37.037 | 0.00 | 0.00 | 0.00 | 3.86 |
597 | 598 | 0.251787 | GTGAGGCCCTTTCATTGGGT | 60.252 | 55.000 | 0.00 | 0.00 | 46.22 | 4.51 |
614 | 616 | 8.765488 | TCATTGGGTATGATTTGATGTTACAT | 57.235 | 30.769 | 0.00 | 0.00 | 38.35 | 2.29 |
666 | 668 | 8.868103 | AGCAGATAGTGAATGATATTCAGAAGA | 58.132 | 33.333 | 4.59 | 0.00 | 0.00 | 2.87 |
707 | 709 | 8.756486 | ATGACACCATCATTGATGAGATTAAA | 57.244 | 30.769 | 24.93 | 7.34 | 46.54 | 1.52 |
771 | 788 | 2.573941 | ACGTCGATAGGTTAGCCAAC | 57.426 | 50.000 | 0.00 | 0.00 | 37.19 | 3.77 |
787 | 804 | 8.357402 | GGTTAGCCAACTTTTTCAATTCTCTTA | 58.643 | 33.333 | 0.00 | 0.00 | 34.88 | 2.10 |
798 | 816 | 8.940397 | TTTTCAATTCTCTTAATCAAGGAGGT | 57.060 | 30.769 | 0.00 | 0.00 | 32.22 | 3.85 |
830 | 849 | 3.790976 | TGATCCAACCCATGATCCCTTTA | 59.209 | 43.478 | 0.00 | 0.00 | 0.00 | 1.85 |
845 | 864 | 7.068702 | TGATCCCTTTATAATGCCACTTCATT | 58.931 | 34.615 | 0.00 | 0.00 | 39.70 | 2.57 |
852 | 871 | 5.841957 | ATAATGCCACTTCATTTGGACTC | 57.158 | 39.130 | 0.00 | 0.00 | 37.75 | 3.36 |
854 | 873 | 4.574674 | ATGCCACTTCATTTGGACTCTA | 57.425 | 40.909 | 0.00 | 0.00 | 36.02 | 2.43 |
855 | 874 | 3.942829 | TGCCACTTCATTTGGACTCTAG | 58.057 | 45.455 | 0.00 | 0.00 | 36.02 | 2.43 |
856 | 875 | 2.680339 | GCCACTTCATTTGGACTCTAGC | 59.320 | 50.000 | 0.00 | 0.00 | 36.02 | 3.42 |
878 | 897 | 4.893524 | GCCAATAAAGCTTGGTTATACCCT | 59.106 | 41.667 | 0.00 | 0.00 | 46.19 | 4.34 |
879 | 898 | 6.066032 | GCCAATAAAGCTTGGTTATACCCTA | 58.934 | 40.000 | 0.00 | 0.00 | 46.19 | 3.53 |
903 | 922 | 5.479716 | AAAAACCTCAACACTCGTAACTG | 57.520 | 39.130 | 0.00 | 0.00 | 0.00 | 3.16 |
904 | 923 | 3.814005 | AACCTCAACACTCGTAACTGT | 57.186 | 42.857 | 0.00 | 0.00 | 0.00 | 3.55 |
905 | 924 | 4.924305 | AACCTCAACACTCGTAACTGTA | 57.076 | 40.909 | 0.00 | 0.00 | 0.00 | 2.74 |
906 | 925 | 4.234530 | ACCTCAACACTCGTAACTGTAC | 57.765 | 45.455 | 0.00 | 0.00 | 0.00 | 2.90 |
907 | 926 | 3.633525 | ACCTCAACACTCGTAACTGTACA | 59.366 | 43.478 | 0.00 | 0.00 | 0.00 | 2.90 |
908 | 927 | 3.979495 | CCTCAACACTCGTAACTGTACAC | 59.021 | 47.826 | 0.00 | 0.00 | 0.00 | 2.90 |
909 | 928 | 4.498513 | CCTCAACACTCGTAACTGTACACA | 60.499 | 45.833 | 0.00 | 0.00 | 0.00 | 3.72 |
910 | 929 | 4.353737 | TCAACACTCGTAACTGTACACAC | 58.646 | 43.478 | 0.00 | 0.00 | 0.00 | 3.82 |
911 | 930 | 3.360249 | ACACTCGTAACTGTACACACC | 57.640 | 47.619 | 0.00 | 0.00 | 0.00 | 4.16 |
912 | 931 | 2.035066 | ACACTCGTAACTGTACACACCC | 59.965 | 50.000 | 0.00 | 0.00 | 0.00 | 4.61 |
913 | 932 | 1.615392 | ACTCGTAACTGTACACACCCC | 59.385 | 52.381 | 0.00 | 0.00 | 0.00 | 4.95 |
914 | 933 | 1.891150 | CTCGTAACTGTACACACCCCT | 59.109 | 52.381 | 0.00 | 0.00 | 0.00 | 4.79 |
915 | 934 | 3.084039 | CTCGTAACTGTACACACCCCTA | 58.916 | 50.000 | 0.00 | 0.00 | 0.00 | 3.53 |
916 | 935 | 3.495331 | TCGTAACTGTACACACCCCTAA | 58.505 | 45.455 | 0.00 | 0.00 | 0.00 | 2.69 |
917 | 936 | 4.088634 | TCGTAACTGTACACACCCCTAAT | 58.911 | 43.478 | 0.00 | 0.00 | 0.00 | 1.73 |
918 | 937 | 4.527816 | TCGTAACTGTACACACCCCTAATT | 59.472 | 41.667 | 0.00 | 0.00 | 0.00 | 1.40 |
919 | 938 | 5.714333 | TCGTAACTGTACACACCCCTAATTA | 59.286 | 40.000 | 0.00 | 0.00 | 0.00 | 1.40 |
920 | 939 | 6.210385 | TCGTAACTGTACACACCCCTAATTAA | 59.790 | 38.462 | 0.00 | 0.00 | 0.00 | 1.40 |
921 | 940 | 6.873076 | CGTAACTGTACACACCCCTAATTAAA | 59.127 | 38.462 | 0.00 | 0.00 | 0.00 | 1.52 |
922 | 941 | 7.387397 | CGTAACTGTACACACCCCTAATTAAAA | 59.613 | 37.037 | 0.00 | 0.00 | 0.00 | 1.52 |
923 | 942 | 9.065798 | GTAACTGTACACACCCCTAATTAAAAA | 57.934 | 33.333 | 0.00 | 0.00 | 0.00 | 1.94 |
961 | 980 | 0.109458 | CACTGCTACTACGGCGTCAA | 60.109 | 55.000 | 19.21 | 0.00 | 0.00 | 3.18 |
1072 | 1091 | 3.967335 | GCTCTATCGTCGGCCGCT | 61.967 | 66.667 | 23.51 | 7.46 | 36.19 | 5.52 |
1108 | 1130 | 2.759973 | CCTCCTGCACCGCCTCTA | 60.760 | 66.667 | 0.00 | 0.00 | 0.00 | 2.43 |
1188 | 1210 | 2.127118 | GTCGTCGTCGAAGCCGAA | 60.127 | 61.111 | 5.99 | 0.00 | 41.80 | 4.30 |
1194 | 1216 | 1.645704 | TCGTCGAAGCCGAAGAGGAG | 61.646 | 60.000 | 0.00 | 0.00 | 45.54 | 3.69 |
1405 | 1427 | 1.135228 | TGATTGCGCTGCGTAGTTAGA | 60.135 | 47.619 | 24.04 | 3.72 | 0.00 | 2.10 |
1416 | 1438 | 3.072211 | GCGTAGTTAGAGCAAGGGTTTT | 58.928 | 45.455 | 0.00 | 0.00 | 0.00 | 2.43 |
1419 | 1441 | 4.151867 | CGTAGTTAGAGCAAGGGTTTTGTC | 59.848 | 45.833 | 0.00 | 0.00 | 0.00 | 3.18 |
1480 | 1502 | 3.581755 | GCAGTGGTACGATCTGTTTGTA | 58.418 | 45.455 | 10.60 | 0.00 | 0.00 | 2.41 |
1481 | 1503 | 4.181578 | GCAGTGGTACGATCTGTTTGTAT | 58.818 | 43.478 | 10.60 | 0.00 | 0.00 | 2.29 |
1482 | 1504 | 4.267928 | GCAGTGGTACGATCTGTTTGTATC | 59.732 | 45.833 | 10.60 | 0.00 | 0.00 | 2.24 |
1484 | 1506 | 5.744345 | CAGTGGTACGATCTGTTTGTATCTC | 59.256 | 44.000 | 0.00 | 0.00 | 0.00 | 2.75 |
1539 | 1562 | 9.950680 | TGTTTGATTTCTGTAGTTGAATTCTTC | 57.049 | 29.630 | 7.05 | 0.00 | 0.00 | 2.87 |
1564 | 1587 | 6.322201 | CAGGTAGCCAATTTTTCTGTATGGAT | 59.678 | 38.462 | 0.00 | 0.00 | 33.73 | 3.41 |
1566 | 1589 | 7.721399 | AGGTAGCCAATTTTTCTGTATGGATAG | 59.279 | 37.037 | 0.00 | 0.00 | 33.14 | 2.08 |
1567 | 1590 | 6.966534 | AGCCAATTTTTCTGTATGGATAGG | 57.033 | 37.500 | 0.00 | 0.00 | 32.82 | 2.57 |
1612 | 1637 | 8.630054 | TGAGTTGTACTGCTGGTTAATAATTT | 57.370 | 30.769 | 0.00 | 0.00 | 0.00 | 1.82 |
1643 | 1693 | 4.340950 | GGATCGCCTATTTCCAAATTCCAA | 59.659 | 41.667 | 0.00 | 0.00 | 0.00 | 3.53 |
1644 | 1694 | 4.981806 | TCGCCTATTTCCAAATTCCAAG | 57.018 | 40.909 | 0.00 | 0.00 | 0.00 | 3.61 |
1645 | 1695 | 4.340617 | TCGCCTATTTCCAAATTCCAAGT | 58.659 | 39.130 | 0.00 | 0.00 | 0.00 | 3.16 |
1646 | 1696 | 4.398044 | TCGCCTATTTCCAAATTCCAAGTC | 59.602 | 41.667 | 0.00 | 0.00 | 0.00 | 3.01 |
1647 | 1697 | 4.672409 | GCCTATTTCCAAATTCCAAGTCG | 58.328 | 43.478 | 0.00 | 0.00 | 0.00 | 4.18 |
1648 | 1698 | 4.398044 | GCCTATTTCCAAATTCCAAGTCGA | 59.602 | 41.667 | 0.00 | 0.00 | 0.00 | 4.20 |
1649 | 1699 | 5.676331 | GCCTATTTCCAAATTCCAAGTCGAC | 60.676 | 44.000 | 7.70 | 7.70 | 0.00 | 4.20 |
1650 | 1700 | 4.783764 | ATTTCCAAATTCCAAGTCGACC | 57.216 | 40.909 | 13.01 | 0.00 | 0.00 | 4.79 |
1651 | 1701 | 2.940994 | TCCAAATTCCAAGTCGACCA | 57.059 | 45.000 | 13.01 | 0.00 | 0.00 | 4.02 |
1652 | 1702 | 3.216187 | TCCAAATTCCAAGTCGACCAA | 57.784 | 42.857 | 13.01 | 0.36 | 0.00 | 3.67 |
1653 | 1703 | 3.556999 | TCCAAATTCCAAGTCGACCAAA | 58.443 | 40.909 | 13.01 | 1.88 | 0.00 | 3.28 |
1654 | 1704 | 3.954904 | TCCAAATTCCAAGTCGACCAAAA | 59.045 | 39.130 | 13.01 | 2.26 | 0.00 | 2.44 |
1655 | 1705 | 4.586841 | TCCAAATTCCAAGTCGACCAAAAT | 59.413 | 37.500 | 13.01 | 4.67 | 0.00 | 1.82 |
1656 | 1706 | 5.069781 | TCCAAATTCCAAGTCGACCAAAATT | 59.930 | 36.000 | 13.01 | 10.43 | 0.00 | 1.82 |
1657 | 1707 | 5.757808 | CCAAATTCCAAGTCGACCAAAATTT | 59.242 | 36.000 | 13.01 | 15.30 | 0.00 | 1.82 |
1658 | 1708 | 6.073819 | CCAAATTCCAAGTCGACCAAAATTTC | 60.074 | 38.462 | 13.01 | 0.00 | 0.00 | 2.17 |
1659 | 1709 | 4.577834 | TTCCAAGTCGACCAAAATTTCC | 57.422 | 40.909 | 13.01 | 0.00 | 0.00 | 3.13 |
1660 | 1710 | 3.556999 | TCCAAGTCGACCAAAATTTCCA | 58.443 | 40.909 | 13.01 | 0.00 | 0.00 | 3.53 |
1661 | 1711 | 4.148838 | TCCAAGTCGACCAAAATTTCCAT | 58.851 | 39.130 | 13.01 | 0.00 | 0.00 | 3.41 |
1662 | 1712 | 4.586841 | TCCAAGTCGACCAAAATTTCCATT | 59.413 | 37.500 | 13.01 | 0.00 | 0.00 | 3.16 |
1663 | 1713 | 5.069781 | TCCAAGTCGACCAAAATTTCCATTT | 59.930 | 36.000 | 13.01 | 0.00 | 33.72 | 2.32 |
1664 | 1714 | 5.405269 | CCAAGTCGACCAAAATTTCCATTTC | 59.595 | 40.000 | 13.01 | 0.00 | 30.80 | 2.17 |
1665 | 1715 | 5.134202 | AGTCGACCAAAATTTCCATTTCC | 57.866 | 39.130 | 13.01 | 0.00 | 30.80 | 3.13 |
1666 | 1716 | 4.586841 | AGTCGACCAAAATTTCCATTTCCA | 59.413 | 37.500 | 13.01 | 0.00 | 30.80 | 3.53 |
1670 | 1720 | 5.700373 | CGACCAAAATTTCCATTTCCATGTT | 59.300 | 36.000 | 0.00 | 0.00 | 30.80 | 2.71 |
1673 | 1723 | 5.241064 | CCAAAATTTCCATTTCCATGTTGCA | 59.759 | 36.000 | 0.00 | 0.00 | 30.80 | 4.08 |
1729 | 1780 | 4.949856 | CAGAAATAGGGTAGGTGCACATTT | 59.050 | 41.667 | 20.43 | 13.44 | 0.00 | 2.32 |
1823 | 1874 | 7.517320 | TGGCTTAGAAGAAATATAGCCAATCA | 58.483 | 34.615 | 10.90 | 0.00 | 46.48 | 2.57 |
1842 | 1893 | 8.032451 | GCCAATCAGTTATATAGAGTCTCCTTC | 58.968 | 40.741 | 0.00 | 0.00 | 0.00 | 3.46 |
1891 | 1942 | 4.452455 | CCTCCAATCCATAATAAGTGTCGC | 59.548 | 45.833 | 0.00 | 0.00 | 0.00 | 5.19 |
1892 | 1943 | 5.029807 | TCCAATCCATAATAAGTGTCGCA | 57.970 | 39.130 | 0.00 | 0.00 | 0.00 | 5.10 |
1893 | 1944 | 5.620206 | TCCAATCCATAATAAGTGTCGCAT | 58.380 | 37.500 | 0.00 | 0.00 | 0.00 | 4.73 |
1894 | 1945 | 6.061441 | TCCAATCCATAATAAGTGTCGCATT | 58.939 | 36.000 | 0.00 | 0.00 | 0.00 | 3.56 |
1895 | 1946 | 6.545666 | TCCAATCCATAATAAGTGTCGCATTT | 59.454 | 34.615 | 0.00 | 0.00 | 0.00 | 2.32 |
1896 | 1947 | 7.068103 | TCCAATCCATAATAAGTGTCGCATTTT | 59.932 | 33.333 | 0.00 | 0.00 | 0.00 | 1.82 |
1897 | 1948 | 7.706179 | CCAATCCATAATAAGTGTCGCATTTTT | 59.294 | 33.333 | 0.00 | 0.00 | 0.00 | 1.94 |
1933 | 1984 | 3.495753 | ACTAACCTTAGTTCAAAACCGCG | 59.504 | 43.478 | 0.00 | 0.00 | 40.96 | 6.46 |
1934 | 1985 | 2.243602 | ACCTTAGTTCAAAACCGCGA | 57.756 | 45.000 | 8.23 | 0.00 | 0.00 | 5.87 |
1935 | 1986 | 1.869132 | ACCTTAGTTCAAAACCGCGAC | 59.131 | 47.619 | 8.23 | 0.00 | 0.00 | 5.19 |
1936 | 1987 | 1.196127 | CCTTAGTTCAAAACCGCGACC | 59.804 | 52.381 | 8.23 | 0.00 | 0.00 | 4.79 |
1937 | 1988 | 2.140717 | CTTAGTTCAAAACCGCGACCT | 58.859 | 47.619 | 8.23 | 0.00 | 0.00 | 3.85 |
1938 | 1989 | 2.243602 | TAGTTCAAAACCGCGACCTT | 57.756 | 45.000 | 8.23 | 0.00 | 0.00 | 3.50 |
1939 | 1990 | 2.243602 | AGTTCAAAACCGCGACCTTA | 57.756 | 45.000 | 8.23 | 0.00 | 0.00 | 2.69 |
1940 | 1991 | 1.869132 | AGTTCAAAACCGCGACCTTAC | 59.131 | 47.619 | 8.23 | 0.00 | 0.00 | 2.34 |
1941 | 1992 | 1.869132 | GTTCAAAACCGCGACCTTACT | 59.131 | 47.619 | 8.23 | 0.00 | 0.00 | 2.24 |
1942 | 1993 | 2.243602 | TCAAAACCGCGACCTTACTT | 57.756 | 45.000 | 8.23 | 0.00 | 0.00 | 2.24 |
1943 | 1994 | 2.563702 | TCAAAACCGCGACCTTACTTT | 58.436 | 42.857 | 8.23 | 0.00 | 0.00 | 2.66 |
1944 | 1995 | 2.288458 | TCAAAACCGCGACCTTACTTTG | 59.712 | 45.455 | 8.23 | 6.43 | 0.00 | 2.77 |
1945 | 1996 | 1.232119 | AAACCGCGACCTTACTTTGG | 58.768 | 50.000 | 8.23 | 0.00 | 0.00 | 3.28 |
1946 | 1997 | 0.393820 | AACCGCGACCTTACTTTGGA | 59.606 | 50.000 | 8.23 | 0.00 | 0.00 | 3.53 |
1947 | 1998 | 0.611714 | ACCGCGACCTTACTTTGGAT | 59.388 | 50.000 | 8.23 | 0.00 | 0.00 | 3.41 |
1948 | 1999 | 1.287425 | CCGCGACCTTACTTTGGATC | 58.713 | 55.000 | 8.23 | 0.00 | 0.00 | 3.36 |
1949 | 2000 | 0.921347 | CGCGACCTTACTTTGGATCG | 59.079 | 55.000 | 0.00 | 0.00 | 34.08 | 3.69 |
1950 | 2001 | 1.287425 | GCGACCTTACTTTGGATCGG | 58.713 | 55.000 | 0.00 | 0.00 | 32.73 | 4.18 |
1951 | 2002 | 1.134907 | GCGACCTTACTTTGGATCGGA | 60.135 | 52.381 | 0.00 | 0.00 | 32.73 | 4.55 |
1952 | 2003 | 2.810650 | CGACCTTACTTTGGATCGGAG | 58.189 | 52.381 | 0.00 | 0.00 | 0.00 | 4.63 |
1969 | 2020 | 3.069586 | TCGGAGGGAGTAGCATTTATGTG | 59.930 | 47.826 | 0.00 | 0.00 | 0.00 | 3.21 |
1984 | 2035 | 7.253422 | GCATTTATGTGCTTTAGTGATCTTGT | 58.747 | 34.615 | 0.00 | 0.00 | 41.82 | 3.16 |
1990 | 2041 | 4.681483 | GTGCTTTAGTGATCTTGTTTTGCC | 59.319 | 41.667 | 0.00 | 0.00 | 0.00 | 4.52 |
2005 | 2056 | 3.766068 | TTTGCCATTGCTGATTGGAAA | 57.234 | 38.095 | 0.00 | 0.00 | 38.71 | 3.13 |
2010 | 2061 | 3.359033 | CCATTGCTGATTGGAAAGGAGA | 58.641 | 45.455 | 0.00 | 0.00 | 37.07 | 3.71 |
2014 | 2065 | 3.349927 | TGCTGATTGGAAAGGAGACATG | 58.650 | 45.455 | 0.00 | 0.00 | 0.00 | 3.21 |
2018 | 2069 | 4.592942 | TGATTGGAAAGGAGACATGGAAG | 58.407 | 43.478 | 0.00 | 0.00 | 0.00 | 3.46 |
2032 | 2083 | 2.391616 | TGGAAGCTCATGTAGTGCTG | 57.608 | 50.000 | 0.00 | 0.00 | 45.71 | 4.41 |
2033 | 2084 | 1.901833 | TGGAAGCTCATGTAGTGCTGA | 59.098 | 47.619 | 0.00 | 0.00 | 45.71 | 4.26 |
2034 | 2085 | 2.093816 | TGGAAGCTCATGTAGTGCTGAG | 60.094 | 50.000 | 0.00 | 0.00 | 45.71 | 3.35 |
2035 | 2086 | 2.093764 | GGAAGCTCATGTAGTGCTGAGT | 60.094 | 50.000 | 0.00 | 0.00 | 45.71 | 3.41 |
2036 | 2087 | 2.957491 | AGCTCATGTAGTGCTGAGTC | 57.043 | 50.000 | 0.00 | 0.00 | 44.80 | 3.36 |
2037 | 2088 | 1.480137 | AGCTCATGTAGTGCTGAGTCC | 59.520 | 52.381 | 0.00 | 0.00 | 44.80 | 3.85 |
2038 | 2089 | 1.480137 | GCTCATGTAGTGCTGAGTCCT | 59.520 | 52.381 | 0.00 | 0.00 | 40.80 | 3.85 |
2039 | 2090 | 2.093764 | GCTCATGTAGTGCTGAGTCCTT | 60.094 | 50.000 | 0.00 | 0.00 | 40.80 | 3.36 |
2040 | 2091 | 3.618507 | GCTCATGTAGTGCTGAGTCCTTT | 60.619 | 47.826 | 0.00 | 0.00 | 40.80 | 3.11 |
2041 | 2092 | 4.382040 | GCTCATGTAGTGCTGAGTCCTTTA | 60.382 | 45.833 | 0.00 | 0.00 | 40.80 | 1.85 |
2042 | 2093 | 5.683509 | GCTCATGTAGTGCTGAGTCCTTTAT | 60.684 | 44.000 | 0.00 | 0.00 | 40.80 | 1.40 |
2043 | 2094 | 5.907207 | TCATGTAGTGCTGAGTCCTTTATC | 58.093 | 41.667 | 0.00 | 0.00 | 0.00 | 1.75 |
2044 | 2095 | 4.371855 | TGTAGTGCTGAGTCCTTTATCG | 57.628 | 45.455 | 0.00 | 0.00 | 0.00 | 2.92 |
2045 | 2096 | 2.969628 | AGTGCTGAGTCCTTTATCGG | 57.030 | 50.000 | 0.00 | 0.00 | 0.00 | 4.18 |
2046 | 2097 | 2.457598 | AGTGCTGAGTCCTTTATCGGA | 58.542 | 47.619 | 0.00 | 0.00 | 0.00 | 4.55 |
2047 | 2098 | 2.832129 | AGTGCTGAGTCCTTTATCGGAA | 59.168 | 45.455 | 0.00 | 0.00 | 34.20 | 4.30 |
2048 | 2099 | 3.260884 | AGTGCTGAGTCCTTTATCGGAAA | 59.739 | 43.478 | 0.00 | 0.00 | 34.20 | 3.13 |
2049 | 2100 | 4.000988 | GTGCTGAGTCCTTTATCGGAAAA | 58.999 | 43.478 | 0.00 | 0.00 | 34.20 | 2.29 |
2050 | 2101 | 4.454504 | GTGCTGAGTCCTTTATCGGAAAAA | 59.545 | 41.667 | 0.00 | 0.00 | 34.20 | 1.94 |
2144 | 2195 | 7.984422 | TGTCAGATAAACATTTGTCTCATGT | 57.016 | 32.000 | 1.03 | 0.00 | 36.64 | 3.21 |
2168 | 2219 | 0.029834 | GCTGTGCCATCTTATTGCCG | 59.970 | 55.000 | 0.00 | 0.00 | 0.00 | 5.69 |
2170 | 2221 | 1.331756 | CTGTGCCATCTTATTGCCGAC | 59.668 | 52.381 | 0.00 | 0.00 | 0.00 | 4.79 |
2366 | 2421 | 7.828717 | TGAGCCATTGATTTCATTAAGTAGTGA | 59.171 | 33.333 | 0.00 | 0.00 | 0.00 | 3.41 |
2468 | 2523 | 5.182001 | GCACATATCCAAACAGTCACTTCTT | 59.818 | 40.000 | 0.00 | 0.00 | 0.00 | 2.52 |
2497 | 2556 | 7.772292 | TCTGTCTCTTTGCATTGCTTATTCTAT | 59.228 | 33.333 | 10.49 | 0.00 | 0.00 | 1.98 |
2541 | 2600 | 6.590234 | ACAGGATCAAACAATTTTACCCTC | 57.410 | 37.500 | 0.00 | 0.00 | 0.00 | 4.30 |
2557 | 2616 | 2.965831 | ACCCTCGCTGCTATATTTCTCA | 59.034 | 45.455 | 0.00 | 0.00 | 0.00 | 3.27 |
2607 | 2668 | 7.797819 | CGAGAGCATTAGTTCTTTAACTTTGT | 58.202 | 34.615 | 0.00 | 0.00 | 43.60 | 2.83 |
2776 | 2837 | 8.868583 | CCAAATCACTGGAAGCATATACTGCAT | 61.869 | 40.741 | 9.01 | 0.00 | 45.67 | 3.96 |
2790 | 2851 | 8.261492 | CATATACTGCATTCCTCCATTCTTAC | 57.739 | 38.462 | 0.00 | 0.00 | 0.00 | 2.34 |
2817 | 2878 | 6.577103 | TCGATCAAAGATGATAGACAAAGCT | 58.423 | 36.000 | 0.00 | 0.00 | 46.30 | 3.74 |
2853 | 2914 | 3.118334 | AGAGAATGAAGGATGCAGACCTG | 60.118 | 47.826 | 14.62 | 0.00 | 37.85 | 4.00 |
2890 | 2951 | 5.192927 | TGGTCTACAATGAAATGATGACCC | 58.807 | 41.667 | 0.00 | 0.00 | 41.15 | 4.46 |
2904 | 2965 | 8.455903 | AAATGATGACCCTGTATATTTCTGTG | 57.544 | 34.615 | 0.00 | 0.00 | 0.00 | 3.66 |
2934 | 2995 | 3.686016 | TGATAAGGTTCCAACTCTTGCC | 58.314 | 45.455 | 0.00 | 0.00 | 0.00 | 4.52 |
2955 | 3016 | 3.366374 | CCGAGGAATTGAAGAGGCAAAAC | 60.366 | 47.826 | 0.00 | 0.00 | 0.00 | 2.43 |
2961 | 3022 | 2.748461 | TGAAGAGGCAAAACGTTTCG | 57.252 | 45.000 | 15.01 | 3.86 | 0.00 | 3.46 |
2967 | 3028 | 0.039527 | GGCAAAACGTTTCGCCAGAT | 60.040 | 50.000 | 32.69 | 5.72 | 44.25 | 2.90 |
3042 | 3103 | 3.699038 | AGGTCTTCAGAGGAATTCTCGAG | 59.301 | 47.826 | 5.93 | 5.93 | 46.82 | 4.04 |
3075 | 3136 | 0.249398 | ATCCGAACTCCAACGAAGGG | 59.751 | 55.000 | 0.00 | 0.00 | 0.00 | 3.95 |
3111 | 3172 | 4.260538 | CGAAACCTCGCTAGTATCTACGTT | 60.261 | 45.833 | 0.00 | 0.00 | 38.45 | 3.99 |
3150 | 3211 | 1.820581 | CTCGGGGAATTCGCTGGTA | 59.179 | 57.895 | 26.00 | 11.02 | 36.04 | 3.25 |
3180 | 3241 | 1.346068 | GCGAAGATTAGCCAGAGGGAT | 59.654 | 52.381 | 0.00 | 0.00 | 35.59 | 3.85 |
3270 | 3331 | 3.548745 | TGGAAATCGATGCAGATGACT | 57.451 | 42.857 | 0.00 | 0.00 | 0.00 | 3.41 |
3288 | 3349 | 1.007721 | ACTGCCCAGAGGATGACTAGT | 59.992 | 52.381 | 0.00 | 0.00 | 33.47 | 2.57 |
3312 | 3373 | 1.468985 | ACTATGTCTGCGTGCTCTCT | 58.531 | 50.000 | 0.00 | 0.00 | 0.00 | 3.10 |
3379 | 3440 | 1.421485 | CAGTGGCAGCGATCGAAAC | 59.579 | 57.895 | 21.57 | 8.51 | 0.00 | 2.78 |
3568 | 3631 | 1.968017 | GCTGCCTGCTGCTGTGTTA | 60.968 | 57.895 | 12.97 | 0.00 | 42.00 | 2.41 |
3569 | 3632 | 1.310933 | GCTGCCTGCTGCTGTGTTAT | 61.311 | 55.000 | 12.97 | 0.00 | 42.00 | 1.89 |
3570 | 3633 | 0.450583 | CTGCCTGCTGCTGTGTTATG | 59.549 | 55.000 | 0.00 | 0.00 | 42.00 | 1.90 |
3571 | 3634 | 0.961857 | TGCCTGCTGCTGTGTTATGG | 60.962 | 55.000 | 0.00 | 0.00 | 42.00 | 2.74 |
3572 | 3635 | 0.677731 | GCCTGCTGCTGTGTTATGGA | 60.678 | 55.000 | 0.00 | 0.00 | 36.87 | 3.41 |
3573 | 3636 | 1.089920 | CCTGCTGCTGTGTTATGGAC | 58.910 | 55.000 | 0.00 | 0.00 | 0.00 | 4.02 |
3574 | 3637 | 1.339438 | CCTGCTGCTGTGTTATGGACT | 60.339 | 52.381 | 0.00 | 0.00 | 0.00 | 3.85 |
3575 | 3638 | 2.430465 | CTGCTGCTGTGTTATGGACTT | 58.570 | 47.619 | 0.00 | 0.00 | 0.00 | 3.01 |
3576 | 3639 | 3.599343 | CTGCTGCTGTGTTATGGACTTA | 58.401 | 45.455 | 0.00 | 0.00 | 0.00 | 2.24 |
3598 | 3661 | 4.931661 | TGGTACGAGAATAATGGACTCC | 57.068 | 45.455 | 0.00 | 0.00 | 0.00 | 3.85 |
3638 | 3701 | 9.421806 | CTTTATTTTGGCAAATACAATCTGACA | 57.578 | 29.630 | 14.29 | 0.00 | 35.05 | 3.58 |
3662 | 3725 | 4.617520 | TCAGGTCAAGCGCCGCAA | 62.618 | 61.111 | 13.36 | 0.00 | 0.00 | 4.85 |
3706 | 3769 | 2.260481 | GTCCAGCGTAACTAAGAGCAC | 58.740 | 52.381 | 0.00 | 0.00 | 0.00 | 4.40 |
3745 | 3808 | 0.596082 | GTGGCAGCGGTGTATGTTTT | 59.404 | 50.000 | 17.07 | 0.00 | 0.00 | 2.43 |
3756 | 3819 | 5.465935 | CGGTGTATGTTTTATTGGTTGCTT | 58.534 | 37.500 | 0.00 | 0.00 | 0.00 | 3.91 |
3767 | 3830 | 1.026182 | TGGTTGCTTCGCTGCCATAG | 61.026 | 55.000 | 0.00 | 0.00 | 31.13 | 2.23 |
3783 | 3846 | 0.541392 | ATAGCCGAGCCATGTCACAA | 59.459 | 50.000 | 0.00 | 0.00 | 0.00 | 3.33 |
3784 | 3847 | 0.541392 | TAGCCGAGCCATGTCACAAT | 59.459 | 50.000 | 0.00 | 0.00 | 0.00 | 2.71 |
3849 | 4046 | 0.387239 | GCTGCGGCGAACATTTTCTT | 60.387 | 50.000 | 12.98 | 0.00 | 0.00 | 2.52 |
3925 | 4122 | 1.741770 | GCCTCAGGTGCCAACTACG | 60.742 | 63.158 | 0.00 | 0.00 | 0.00 | 3.51 |
3958 | 4165 | 5.412904 | GCTAAAGCTGAAGTTGGTAACTGAT | 59.587 | 40.000 | 0.00 | 0.00 | 38.88 | 2.90 |
3959 | 4166 | 6.072452 | GCTAAAGCTGAAGTTGGTAACTGATT | 60.072 | 38.462 | 0.00 | 0.00 | 38.88 | 2.57 |
3969 | 4176 | 1.519408 | GTAACTGATTGCACCCGTGT | 58.481 | 50.000 | 0.00 | 0.00 | 0.00 | 4.49 |
3981 | 4188 | 1.125093 | ACCCGTGTTCATCCTGTGGA | 61.125 | 55.000 | 0.00 | 0.00 | 35.55 | 4.02 |
4008 | 4215 | 4.753610 | CACGAATTGAGTGGCATATGATCT | 59.246 | 41.667 | 6.97 | 0.61 | 36.06 | 2.75 |
4024 | 4231 | 2.263077 | GATCTGTACAACTGCTCCACG | 58.737 | 52.381 | 0.00 | 0.00 | 0.00 | 4.94 |
4025 | 4232 | 1.324383 | TCTGTACAACTGCTCCACGA | 58.676 | 50.000 | 0.00 | 0.00 | 0.00 | 4.35 |
4040 | 4251 | 2.331805 | CGAGGGTAGGCGACATCG | 59.668 | 66.667 | 9.42 | 9.42 | 43.27 | 3.84 |
4064 | 4275 | 1.929836 | GATCGGTCACACTTCAGCATC | 59.070 | 52.381 | 0.00 | 0.00 | 0.00 | 3.91 |
4084 | 4296 | 2.104622 | TCTTGTTCTCATGCTCCACACA | 59.895 | 45.455 | 0.00 | 0.00 | 0.00 | 3.72 |
4085 | 4297 | 2.865119 | TGTTCTCATGCTCCACACAT | 57.135 | 45.000 | 0.00 | 0.00 | 0.00 | 3.21 |
4117 | 4481 | 1.965930 | GCATGCACCGGTGAGACAA | 60.966 | 57.895 | 38.30 | 16.84 | 0.00 | 3.18 |
4118 | 4482 | 1.308069 | GCATGCACCGGTGAGACAAT | 61.308 | 55.000 | 38.30 | 18.30 | 0.00 | 2.71 |
4120 | 4484 | 1.665679 | CATGCACCGGTGAGACAATAC | 59.334 | 52.381 | 38.30 | 17.61 | 0.00 | 1.89 |
4121 | 4485 | 0.682292 | TGCACCGGTGAGACAATACA | 59.318 | 50.000 | 38.30 | 20.10 | 0.00 | 2.29 |
4122 | 4486 | 1.277842 | TGCACCGGTGAGACAATACAT | 59.722 | 47.619 | 38.30 | 0.00 | 0.00 | 2.29 |
4123 | 4487 | 1.665679 | GCACCGGTGAGACAATACATG | 59.334 | 52.381 | 38.30 | 7.17 | 0.00 | 3.21 |
4124 | 4488 | 2.676750 | GCACCGGTGAGACAATACATGA | 60.677 | 50.000 | 38.30 | 0.00 | 0.00 | 3.07 |
4151 | 4516 | 5.647658 | GTCCATGTCATATGAAAACCAGTCA | 59.352 | 40.000 | 7.07 | 0.00 | 0.00 | 3.41 |
4198 | 4563 | 3.364442 | TTGGCGTCATTGGGCAAG | 58.636 | 55.556 | 0.00 | 0.00 | 43.85 | 4.01 |
4218 | 4583 | 1.480212 | CCTCAGCTACCACACCCACA | 61.480 | 60.000 | 0.00 | 0.00 | 0.00 | 4.17 |
4289 | 4660 | 4.807443 | TGTATGACATTTACGGTCGACAA | 58.193 | 39.130 | 18.91 | 2.89 | 38.10 | 3.18 |
4290 | 4661 | 5.228665 | TGTATGACATTTACGGTCGACAAA | 58.771 | 37.500 | 18.91 | 9.90 | 38.10 | 2.83 |
4292 | 4663 | 4.718858 | TGACATTTACGGTCGACAAAAG | 57.281 | 40.909 | 18.91 | 8.98 | 38.10 | 2.27 |
4447 | 4830 | 5.520376 | TTCTGCCCAAGAAAGAAAGAAAG | 57.480 | 39.130 | 0.00 | 0.00 | 42.09 | 2.62 |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
1 | 2 | 1.783071 | AATCCTCTCCGTCTCTTCCC | 58.217 | 55.000 | 0.00 | 0.00 | 0.00 | 3.97 |
2 | 3 | 2.159028 | CCAAATCCTCTCCGTCTCTTCC | 60.159 | 54.545 | 0.00 | 0.00 | 0.00 | 3.46 |
3 | 4 | 2.159028 | CCCAAATCCTCTCCGTCTCTTC | 60.159 | 54.545 | 0.00 | 0.00 | 0.00 | 2.87 |
5 | 6 | 1.007238 | TCCCAAATCCTCTCCGTCTCT | 59.993 | 52.381 | 0.00 | 0.00 | 0.00 | 3.10 |
6 | 7 | 1.410882 | CTCCCAAATCCTCTCCGTCTC | 59.589 | 57.143 | 0.00 | 0.00 | 0.00 | 3.36 |
7 | 8 | 1.490574 | CTCCCAAATCCTCTCCGTCT | 58.509 | 55.000 | 0.00 | 0.00 | 0.00 | 4.18 |
8 | 9 | 0.179070 | GCTCCCAAATCCTCTCCGTC | 60.179 | 60.000 | 0.00 | 0.00 | 0.00 | 4.79 |
9 | 10 | 0.618968 | AGCTCCCAAATCCTCTCCGT | 60.619 | 55.000 | 0.00 | 0.00 | 0.00 | 4.69 |
10 | 11 | 1.414158 | TAGCTCCCAAATCCTCTCCG | 58.586 | 55.000 | 0.00 | 0.00 | 0.00 | 4.63 |
11 | 12 | 2.039613 | CCATAGCTCCCAAATCCTCTCC | 59.960 | 54.545 | 0.00 | 0.00 | 0.00 | 3.71 |
12 | 13 | 2.708325 | ACCATAGCTCCCAAATCCTCTC | 59.292 | 50.000 | 0.00 | 0.00 | 0.00 | 3.20 |
13 | 14 | 2.441001 | CACCATAGCTCCCAAATCCTCT | 59.559 | 50.000 | 0.00 | 0.00 | 0.00 | 3.69 |
14 | 15 | 2.173569 | ACACCATAGCTCCCAAATCCTC | 59.826 | 50.000 | 0.00 | 0.00 | 0.00 | 3.71 |
15 | 16 | 2.208872 | ACACCATAGCTCCCAAATCCT | 58.791 | 47.619 | 0.00 | 0.00 | 0.00 | 3.24 |
16 | 17 | 2.736670 | ACACCATAGCTCCCAAATCC | 57.263 | 50.000 | 0.00 | 0.00 | 0.00 | 3.01 |
17 | 18 | 5.066505 | CACTAAACACCATAGCTCCCAAATC | 59.933 | 44.000 | 0.00 | 0.00 | 0.00 | 2.17 |
18 | 19 | 4.949856 | CACTAAACACCATAGCTCCCAAAT | 59.050 | 41.667 | 0.00 | 0.00 | 0.00 | 2.32 |
19 | 20 | 4.042311 | TCACTAAACACCATAGCTCCCAAA | 59.958 | 41.667 | 0.00 | 0.00 | 0.00 | 3.28 |
20 | 21 | 3.585289 | TCACTAAACACCATAGCTCCCAA | 59.415 | 43.478 | 0.00 | 0.00 | 0.00 | 4.12 |
21 | 22 | 3.178046 | TCACTAAACACCATAGCTCCCA | 58.822 | 45.455 | 0.00 | 0.00 | 0.00 | 4.37 |
22 | 23 | 3.432326 | CCTCACTAAACACCATAGCTCCC | 60.432 | 52.174 | 0.00 | 0.00 | 0.00 | 4.30 |
23 | 24 | 3.451178 | TCCTCACTAAACACCATAGCTCC | 59.549 | 47.826 | 0.00 | 0.00 | 0.00 | 4.70 |
24 | 25 | 4.737855 | TCCTCACTAAACACCATAGCTC | 57.262 | 45.455 | 0.00 | 0.00 | 0.00 | 4.09 |
25 | 26 | 5.700402 | ATTCCTCACTAAACACCATAGCT | 57.300 | 39.130 | 0.00 | 0.00 | 0.00 | 3.32 |
26 | 27 | 7.217200 | TCATATTCCTCACTAAACACCATAGC | 58.783 | 38.462 | 0.00 | 0.00 | 0.00 | 2.97 |
27 | 28 | 7.875041 | CCTCATATTCCTCACTAAACACCATAG | 59.125 | 40.741 | 0.00 | 0.00 | 0.00 | 2.23 |
28 | 29 | 7.347222 | ACCTCATATTCCTCACTAAACACCATA | 59.653 | 37.037 | 0.00 | 0.00 | 0.00 | 2.74 |
29 | 30 | 6.158695 | ACCTCATATTCCTCACTAAACACCAT | 59.841 | 38.462 | 0.00 | 0.00 | 0.00 | 3.55 |
30 | 31 | 5.487488 | ACCTCATATTCCTCACTAAACACCA | 59.513 | 40.000 | 0.00 | 0.00 | 0.00 | 4.17 |
31 | 32 | 5.990668 | ACCTCATATTCCTCACTAAACACC | 58.009 | 41.667 | 0.00 | 0.00 | 0.00 | 4.16 |
32 | 33 | 9.046296 | CATAACCTCATATTCCTCACTAAACAC | 57.954 | 37.037 | 0.00 | 0.00 | 0.00 | 3.32 |
33 | 34 | 8.768397 | ACATAACCTCATATTCCTCACTAAACA | 58.232 | 33.333 | 0.00 | 0.00 | 0.00 | 2.83 |
34 | 35 | 9.614792 | AACATAACCTCATATTCCTCACTAAAC | 57.385 | 33.333 | 0.00 | 0.00 | 0.00 | 2.01 |
35 | 36 | 9.832445 | GAACATAACCTCATATTCCTCACTAAA | 57.168 | 33.333 | 0.00 | 0.00 | 0.00 | 1.85 |
36 | 37 | 9.213777 | AGAACATAACCTCATATTCCTCACTAA | 57.786 | 33.333 | 0.00 | 0.00 | 0.00 | 2.24 |
37 | 38 | 8.783660 | AGAACATAACCTCATATTCCTCACTA | 57.216 | 34.615 | 0.00 | 0.00 | 0.00 | 2.74 |
38 | 39 | 7.682787 | AGAACATAACCTCATATTCCTCACT | 57.317 | 36.000 | 0.00 | 0.00 | 0.00 | 3.41 |
39 | 40 | 8.738645 | AAAGAACATAACCTCATATTCCTCAC | 57.261 | 34.615 | 0.00 | 0.00 | 0.00 | 3.51 |
48 | 49 | 9.077885 | ACATTGTGTAAAAGAACATAACCTCAT | 57.922 | 29.630 | 0.00 | 0.00 | 0.00 | 2.90 |
49 | 50 | 8.458573 | ACATTGTGTAAAAGAACATAACCTCA | 57.541 | 30.769 | 0.00 | 0.00 | 0.00 | 3.86 |
50 | 51 | 9.744468 | AAACATTGTGTAAAAGAACATAACCTC | 57.256 | 29.630 | 0.00 | 0.00 | 0.00 | 3.85 |
51 | 52 | 9.744468 | GAAACATTGTGTAAAAGAACATAACCT | 57.256 | 29.630 | 0.00 | 0.00 | 0.00 | 3.50 |
52 | 53 | 9.744468 | AGAAACATTGTGTAAAAGAACATAACC | 57.256 | 29.630 | 0.00 | 0.00 | 0.00 | 2.85 |
56 | 57 | 9.651913 | AACAAGAAACATTGTGTAAAAGAACAT | 57.348 | 25.926 | 0.00 | 0.00 | 42.49 | 2.71 |
57 | 58 | 9.482627 | AAACAAGAAACATTGTGTAAAAGAACA | 57.517 | 25.926 | 0.00 | 0.00 | 42.49 | 3.18 |
88 | 89 | 7.125963 | ACTTTAACCATAACCCCAGTTCAAAAA | 59.874 | 33.333 | 0.00 | 0.00 | 37.42 | 1.94 |
89 | 90 | 6.612049 | ACTTTAACCATAACCCCAGTTCAAAA | 59.388 | 34.615 | 0.00 | 0.00 | 37.42 | 2.44 |
90 | 91 | 6.137559 | ACTTTAACCATAACCCCAGTTCAAA | 58.862 | 36.000 | 0.00 | 0.00 | 37.42 | 2.69 |
91 | 92 | 5.707495 | ACTTTAACCATAACCCCAGTTCAA | 58.293 | 37.500 | 0.00 | 0.00 | 37.42 | 2.69 |
92 | 93 | 5.327737 | ACTTTAACCATAACCCCAGTTCA | 57.672 | 39.130 | 0.00 | 0.00 | 37.42 | 3.18 |
93 | 94 | 5.566032 | GCAACTTTAACCATAACCCCAGTTC | 60.566 | 44.000 | 0.00 | 0.00 | 37.42 | 3.01 |
94 | 95 | 4.282449 | GCAACTTTAACCATAACCCCAGTT | 59.718 | 41.667 | 0.00 | 0.00 | 40.15 | 3.16 |
95 | 96 | 3.830178 | GCAACTTTAACCATAACCCCAGT | 59.170 | 43.478 | 0.00 | 0.00 | 0.00 | 4.00 |
96 | 97 | 4.086457 | AGCAACTTTAACCATAACCCCAG | 58.914 | 43.478 | 0.00 | 0.00 | 0.00 | 4.45 |
97 | 98 | 4.083565 | GAGCAACTTTAACCATAACCCCA | 58.916 | 43.478 | 0.00 | 0.00 | 0.00 | 4.96 |
98 | 99 | 4.341487 | AGAGCAACTTTAACCATAACCCC | 58.659 | 43.478 | 0.00 | 0.00 | 0.00 | 4.95 |
99 | 100 | 6.402875 | CGTTAGAGCAACTTTAACCATAACCC | 60.403 | 42.308 | 3.32 | 0.00 | 34.77 | 4.11 |
100 | 101 | 6.148315 | ACGTTAGAGCAACTTTAACCATAACC | 59.852 | 38.462 | 3.32 | 0.00 | 34.77 | 2.85 |
101 | 102 | 7.125536 | ACGTTAGAGCAACTTTAACCATAAC | 57.874 | 36.000 | 3.32 | 0.00 | 34.77 | 1.89 |
102 | 103 | 6.089820 | CGACGTTAGAGCAACTTTAACCATAA | 59.910 | 38.462 | 0.00 | 0.00 | 34.77 | 1.90 |
103 | 104 | 5.574055 | CGACGTTAGAGCAACTTTAACCATA | 59.426 | 40.000 | 0.00 | 0.00 | 34.77 | 2.74 |
104 | 105 | 4.387862 | CGACGTTAGAGCAACTTTAACCAT | 59.612 | 41.667 | 0.00 | 0.00 | 34.77 | 3.55 |
105 | 106 | 3.737266 | CGACGTTAGAGCAACTTTAACCA | 59.263 | 43.478 | 0.00 | 0.00 | 34.77 | 3.67 |
106 | 107 | 3.422732 | GCGACGTTAGAGCAACTTTAACC | 60.423 | 47.826 | 0.00 | 0.00 | 34.77 | 2.85 |
107 | 108 | 3.182972 | TGCGACGTTAGAGCAACTTTAAC | 59.817 | 43.478 | 6.50 | 0.00 | 38.01 | 2.01 |
108 | 109 | 3.182972 | GTGCGACGTTAGAGCAACTTTAA | 59.817 | 43.478 | 9.78 | 0.00 | 42.93 | 1.52 |
109 | 110 | 2.727798 | GTGCGACGTTAGAGCAACTTTA | 59.272 | 45.455 | 9.78 | 0.00 | 42.93 | 1.85 |
110 | 111 | 1.525619 | GTGCGACGTTAGAGCAACTTT | 59.474 | 47.619 | 9.78 | 0.00 | 42.93 | 2.66 |
111 | 112 | 1.137513 | GTGCGACGTTAGAGCAACTT | 58.862 | 50.000 | 9.78 | 0.00 | 42.93 | 2.66 |
112 | 113 | 1.002250 | CGTGCGACGTTAGAGCAACT | 61.002 | 55.000 | 9.78 | 0.00 | 42.93 | 3.16 |
113 | 114 | 1.411089 | CGTGCGACGTTAGAGCAAC | 59.589 | 57.895 | 9.78 | 5.25 | 42.93 | 4.17 |
114 | 115 | 3.837093 | CGTGCGACGTTAGAGCAA | 58.163 | 55.556 | 9.78 | 0.00 | 42.93 | 3.91 |
124 | 125 | 2.353030 | GCCCAAACAACGTGCGAC | 60.353 | 61.111 | 0.00 | 0.00 | 0.00 | 5.19 |
125 | 126 | 3.587933 | GGCCCAAACAACGTGCGA | 61.588 | 61.111 | 0.00 | 0.00 | 0.00 | 5.10 |
126 | 127 | 4.973360 | CGGCCCAAACAACGTGCG | 62.973 | 66.667 | 0.00 | 0.00 | 0.00 | 5.34 |
128 | 129 | 4.639171 | GGCGGCCCAAACAACGTG | 62.639 | 66.667 | 8.12 | 0.00 | 0.00 | 4.49 |
139 | 140 | 4.778143 | ATCTGTTGTCGGGCGGCC | 62.778 | 66.667 | 20.04 | 20.04 | 0.00 | 6.13 |
140 | 141 | 2.746277 | AATCTGTTGTCGGGCGGC | 60.746 | 61.111 | 0.00 | 0.00 | 0.00 | 6.53 |
141 | 142 | 3.039202 | GCAATCTGTTGTCGGGCGG | 62.039 | 63.158 | 0.00 | 0.00 | 37.65 | 6.13 |
142 | 143 | 2.244436 | CTGCAATCTGTTGTCGGGCG | 62.244 | 60.000 | 0.00 | 0.00 | 37.65 | 6.13 |
143 | 144 | 1.503542 | CTGCAATCTGTTGTCGGGC | 59.496 | 57.895 | 0.00 | 0.00 | 37.65 | 6.13 |
144 | 145 | 0.321564 | TCCTGCAATCTGTTGTCGGG | 60.322 | 55.000 | 0.00 | 0.00 | 38.32 | 5.14 |
145 | 146 | 1.197721 | GTTCCTGCAATCTGTTGTCGG | 59.802 | 52.381 | 0.00 | 0.00 | 37.65 | 4.79 |
146 | 147 | 2.096069 | CAGTTCCTGCAATCTGTTGTCG | 60.096 | 50.000 | 0.00 | 0.00 | 37.65 | 4.35 |
147 | 148 | 3.549299 | CAGTTCCTGCAATCTGTTGTC | 57.451 | 47.619 | 0.00 | 0.00 | 37.65 | 3.18 |
159 | 160 | 1.068055 | GCCAGAAATGTGCAGTTCCTG | 60.068 | 52.381 | 8.48 | 6.75 | 36.18 | 3.86 |
160 | 161 | 1.251251 | GCCAGAAATGTGCAGTTCCT | 58.749 | 50.000 | 8.48 | 0.00 | 36.18 | 3.36 |
161 | 162 | 0.244721 | GGCCAGAAATGTGCAGTTCC | 59.755 | 55.000 | 0.00 | 0.00 | 36.18 | 3.62 |
162 | 163 | 0.244721 | GGGCCAGAAATGTGCAGTTC | 59.755 | 55.000 | 4.39 | 4.44 | 35.82 | 3.01 |
163 | 164 | 1.187567 | GGGGCCAGAAATGTGCAGTT | 61.188 | 55.000 | 4.39 | 0.00 | 0.00 | 3.16 |
164 | 165 | 1.607467 | GGGGCCAGAAATGTGCAGT | 60.607 | 57.895 | 4.39 | 0.00 | 0.00 | 4.40 |
165 | 166 | 1.607178 | TGGGGCCAGAAATGTGCAG | 60.607 | 57.895 | 4.39 | 0.00 | 0.00 | 4.41 |
166 | 167 | 1.907807 | GTGGGGCCAGAAATGTGCA | 60.908 | 57.895 | 4.39 | 0.00 | 0.00 | 4.57 |
167 | 168 | 1.470996 | TTGTGGGGCCAGAAATGTGC | 61.471 | 55.000 | 4.39 | 0.00 | 0.00 | 4.57 |
168 | 169 | 1.269012 | ATTGTGGGGCCAGAAATGTG | 58.731 | 50.000 | 4.39 | 0.00 | 32.98 | 3.21 |
169 | 170 | 2.738743 | CTATTGTGGGGCCAGAAATGT | 58.261 | 47.619 | 4.39 | 0.00 | 32.98 | 2.71 |
170 | 171 | 1.410153 | GCTATTGTGGGGCCAGAAATG | 59.590 | 52.381 | 4.39 | 0.00 | 32.98 | 2.32 |
171 | 172 | 1.780503 | GCTATTGTGGGGCCAGAAAT | 58.219 | 50.000 | 4.39 | 3.88 | 32.98 | 2.17 |
172 | 173 | 0.679640 | CGCTATTGTGGGGCCAGAAA | 60.680 | 55.000 | 4.39 | 0.00 | 32.98 | 2.52 |
173 | 174 | 1.077787 | CGCTATTGTGGGGCCAGAA | 60.078 | 57.895 | 4.39 | 0.00 | 33.76 | 3.02 |
174 | 175 | 1.992834 | TCGCTATTGTGGGGCCAGA | 60.993 | 57.895 | 4.39 | 0.00 | 0.00 | 3.86 |
175 | 176 | 1.819632 | GTCGCTATTGTGGGGCCAG | 60.820 | 63.158 | 4.39 | 0.00 | 0.00 | 4.85 |
176 | 177 | 2.270850 | GTCGCTATTGTGGGGCCA | 59.729 | 61.111 | 4.39 | 0.00 | 0.00 | 5.36 |
177 | 178 | 2.895372 | CGTCGCTATTGTGGGGCC | 60.895 | 66.667 | 0.00 | 0.00 | 0.00 | 5.80 |
178 | 179 | 2.171725 | GTCGTCGCTATTGTGGGGC | 61.172 | 63.158 | 0.00 | 0.00 | 0.00 | 5.80 |
179 | 180 | 1.520787 | GGTCGTCGCTATTGTGGGG | 60.521 | 63.158 | 0.00 | 0.00 | 0.00 | 4.96 |
180 | 181 | 1.876714 | CGGTCGTCGCTATTGTGGG | 60.877 | 63.158 | 0.00 | 0.00 | 0.00 | 4.61 |
181 | 182 | 1.153901 | ACGGTCGTCGCTATTGTGG | 60.154 | 57.895 | 0.00 | 0.00 | 43.89 | 4.17 |
182 | 183 | 1.988409 | CACGGTCGTCGCTATTGTG | 59.012 | 57.895 | 0.00 | 0.00 | 43.89 | 3.33 |
183 | 184 | 1.804326 | GCACGGTCGTCGCTATTGT | 60.804 | 57.895 | 9.43 | 0.00 | 43.89 | 2.71 |
184 | 185 | 1.348538 | TTGCACGGTCGTCGCTATTG | 61.349 | 55.000 | 14.87 | 0.00 | 43.89 | 1.90 |
185 | 186 | 0.459585 | ATTGCACGGTCGTCGCTATT | 60.460 | 50.000 | 14.87 | 2.88 | 43.89 | 1.73 |
186 | 187 | 0.382873 | TATTGCACGGTCGTCGCTAT | 59.617 | 50.000 | 14.87 | 14.56 | 43.89 | 2.97 |
187 | 188 | 0.248336 | CTATTGCACGGTCGTCGCTA | 60.248 | 55.000 | 14.87 | 10.17 | 43.89 | 4.26 |
188 | 189 | 1.516386 | CTATTGCACGGTCGTCGCT | 60.516 | 57.895 | 14.87 | 3.68 | 43.89 | 4.93 |
189 | 190 | 2.995482 | CTATTGCACGGTCGTCGC | 59.005 | 61.111 | 9.66 | 9.66 | 43.89 | 5.19 |
190 | 191 | 1.803922 | TGCTATTGCACGGTCGTCG | 60.804 | 57.895 | 0.00 | 0.00 | 45.31 | 5.12 |
191 | 192 | 4.178861 | TGCTATTGCACGGTCGTC | 57.821 | 55.556 | 0.00 | 0.00 | 45.31 | 4.20 |
194 | 195 | 9.837907 | ACAAAAGTTGTATGCTATTGCACGGTC | 62.838 | 40.741 | 3.34 | 0.00 | 43.87 | 4.79 |
195 | 196 | 8.175392 | ACAAAAGTTGTATGCTATTGCACGGT | 62.175 | 38.462 | 3.34 | 0.00 | 43.87 | 4.83 |
196 | 197 | 5.846155 | ACAAAAGTTGTATGCTATTGCACGG | 60.846 | 40.000 | 3.34 | 0.00 | 43.87 | 4.94 |
197 | 198 | 5.153513 | ACAAAAGTTGTATGCTATTGCACG | 58.846 | 37.500 | 3.34 | 0.00 | 43.87 | 5.34 |
200 | 201 | 7.382218 | AGTTTCACAAAAGTTGTATGCTATTGC | 59.618 | 33.333 | 0.00 | 0.00 | 43.23 | 3.56 |
201 | 202 | 8.801715 | AGTTTCACAAAAGTTGTATGCTATTG | 57.198 | 30.769 | 0.00 | 0.00 | 43.23 | 1.90 |
204 | 205 | 9.278978 | TGATAGTTTCACAAAAGTTGTATGCTA | 57.721 | 29.630 | 0.00 | 0.00 | 43.23 | 3.49 |
205 | 206 | 8.165239 | TGATAGTTTCACAAAAGTTGTATGCT | 57.835 | 30.769 | 0.00 | 0.00 | 43.23 | 3.79 |
231 | 232 | 8.577494 | AGCCCACCATATTCCCAATAATATTAT | 58.423 | 33.333 | 1.91 | 1.91 | 31.17 | 1.28 |
233 | 234 | 6.814802 | AGCCCACCATATTCCCAATAATATT | 58.185 | 36.000 | 0.00 | 0.00 | 31.17 | 1.28 |
235 | 236 | 5.876691 | AGCCCACCATATTCCCAATAATA | 57.123 | 39.130 | 0.00 | 0.00 | 0.00 | 0.98 |
237 | 238 | 4.917040 | TCTAGCCCACCATATTCCCAATAA | 59.083 | 41.667 | 0.00 | 0.00 | 0.00 | 1.40 |
241 | 242 | 2.505672 | TCTAGCCCACCATATTCCCA | 57.494 | 50.000 | 0.00 | 0.00 | 0.00 | 4.37 |
244 | 245 | 6.603599 | AGTTTTTCTTCTAGCCCACCATATTC | 59.396 | 38.462 | 0.00 | 0.00 | 0.00 | 1.75 |
256 | 257 | 6.535508 | CCCCTCGTGAATAGTTTTTCTTCTAG | 59.464 | 42.308 | 0.00 | 0.00 | 0.00 | 2.43 |
267 | 268 | 4.030913 | TGAAAGATCCCCTCGTGAATAGT | 58.969 | 43.478 | 0.00 | 0.00 | 0.00 | 2.12 |
348 | 349 | 1.339920 | TGATTTGATGCTCTTGCCCGA | 60.340 | 47.619 | 0.00 | 0.00 | 38.71 | 5.14 |
362 | 363 | 2.886862 | TGTTGGCTGTTGGTGATTTG | 57.113 | 45.000 | 0.00 | 0.00 | 0.00 | 2.32 |
375 | 376 | 3.723835 | CGCGTAGTTACTTCATTGTTGGC | 60.724 | 47.826 | 0.00 | 0.00 | 0.00 | 4.52 |
379 | 380 | 3.057033 | AGGTCGCGTAGTTACTTCATTGT | 60.057 | 43.478 | 5.77 | 0.00 | 0.00 | 2.71 |
390 | 391 | 1.823041 | GAGCCCTAGGTCGCGTAGT | 60.823 | 63.158 | 8.29 | 0.00 | 0.00 | 2.73 |
424 | 425 | 4.499865 | GCTAGCGTCTACATGGATCTTCAA | 60.500 | 45.833 | 0.00 | 0.00 | 0.00 | 2.69 |
473 | 474 | 2.801483 | TATGCTGACGGCTGCTGCAA | 62.801 | 55.000 | 21.51 | 0.47 | 42.18 | 4.08 |
491 | 492 | 4.946772 | TCATGAAATTTCCGTTGCCATCTA | 59.053 | 37.500 | 15.48 | 0.00 | 0.00 | 1.98 |
499 | 500 | 6.072452 | GGAGAACTTCTCATGAAATTTCCGTT | 60.072 | 38.462 | 18.56 | 7.19 | 45.12 | 4.44 |
501 | 502 | 5.412594 | TGGAGAACTTCTCATGAAATTTCCG | 59.587 | 40.000 | 18.56 | 7.01 | 45.12 | 4.30 |
514 | 515 | 6.604795 | CCATAAATCACCAATGGAGAACTTCT | 59.395 | 38.462 | 6.16 | 0.00 | 42.36 | 2.85 |
551 | 552 | 2.224606 | CGATAGCCTCCATTGTTGCAT | 58.775 | 47.619 | 0.00 | 0.00 | 0.00 | 3.96 |
596 | 597 | 8.765219 | ACGAAGCTATGTAACATCAAATCATAC | 58.235 | 33.333 | 0.00 | 0.00 | 0.00 | 2.39 |
597 | 598 | 8.887036 | ACGAAGCTATGTAACATCAAATCATA | 57.113 | 30.769 | 0.00 | 0.00 | 0.00 | 2.15 |
614 | 616 | 3.819337 | AGTCCGATGCTATTACGAAGCTA | 59.181 | 43.478 | 0.00 | 0.00 | 40.73 | 3.32 |
666 | 668 | 3.758554 | GTGTCATAAGCACCATTGGTTCT | 59.241 | 43.478 | 5.34 | 3.43 | 42.54 | 3.01 |
707 | 709 | 8.366359 | ACAATTGAACATTAAAGCCCTATTCT | 57.634 | 30.769 | 13.59 | 0.00 | 0.00 | 2.40 |
749 | 751 | 1.820519 | TGGCTAACCTATCGACGTTGT | 59.179 | 47.619 | 1.96 | 0.00 | 36.63 | 3.32 |
751 | 753 | 2.494870 | AGTTGGCTAACCTATCGACGTT | 59.505 | 45.455 | 9.60 | 0.00 | 37.52 | 3.99 |
752 | 754 | 2.097825 | AGTTGGCTAACCTATCGACGT | 58.902 | 47.619 | 9.60 | 0.00 | 37.52 | 4.34 |
753 | 755 | 2.865343 | AGTTGGCTAACCTATCGACG | 57.135 | 50.000 | 9.60 | 0.00 | 37.52 | 5.12 |
771 | 788 | 9.852091 | CCTCCTTGATTAAGAGAATTGAAAAAG | 57.148 | 33.333 | 0.00 | 0.00 | 35.92 | 2.27 |
787 | 804 | 6.078456 | TCATCCAAATGTACCTCCTTGATT | 57.922 | 37.500 | 0.00 | 0.00 | 34.32 | 2.57 |
830 | 849 | 5.513233 | AGAGTCCAAATGAAGTGGCATTAT | 58.487 | 37.500 | 0.00 | 0.00 | 37.50 | 1.28 |
845 | 864 | 4.844349 | AGCTTTATTGGCTAGAGTCCAA | 57.156 | 40.909 | 3.17 | 3.17 | 46.44 | 3.53 |
886 | 905 | 3.979495 | GTGTACAGTTACGAGTGTTGAGG | 59.021 | 47.826 | 0.00 | 0.00 | 39.98 | 3.86 |
888 | 907 | 4.353737 | GTGTGTACAGTTACGAGTGTTGA | 58.646 | 43.478 | 0.00 | 0.00 | 39.98 | 3.18 |
889 | 908 | 3.488310 | GGTGTGTACAGTTACGAGTGTTG | 59.512 | 47.826 | 0.00 | 0.00 | 39.98 | 3.33 |
890 | 909 | 3.491447 | GGGTGTGTACAGTTACGAGTGTT | 60.491 | 47.826 | 0.00 | 0.00 | 39.98 | 3.32 |
891 | 910 | 2.035066 | GGGTGTGTACAGTTACGAGTGT | 59.965 | 50.000 | 0.00 | 0.00 | 42.08 | 3.55 |
892 | 911 | 2.608752 | GGGGTGTGTACAGTTACGAGTG | 60.609 | 54.545 | 0.00 | 0.00 | 0.00 | 3.51 |
893 | 912 | 1.615392 | GGGGTGTGTACAGTTACGAGT | 59.385 | 52.381 | 0.00 | 0.00 | 0.00 | 4.18 |
894 | 913 | 1.891150 | AGGGGTGTGTACAGTTACGAG | 59.109 | 52.381 | 0.00 | 0.00 | 0.00 | 4.18 |
895 | 914 | 1.999648 | AGGGGTGTGTACAGTTACGA | 58.000 | 50.000 | 0.00 | 0.00 | 0.00 | 3.43 |
896 | 915 | 3.940209 | TTAGGGGTGTGTACAGTTACG | 57.060 | 47.619 | 0.00 | 0.00 | 0.00 | 3.18 |
897 | 916 | 8.620116 | TTTTAATTAGGGGTGTGTACAGTTAC | 57.380 | 34.615 | 0.00 | 0.00 | 0.00 | 2.50 |
928 | 947 | 7.201679 | CGTAGTAGCAGTGTATAGTTACAAGGT | 60.202 | 40.741 | 0.00 | 0.00 | 39.96 | 3.50 |
929 | 948 | 7.130917 | CGTAGTAGCAGTGTATAGTTACAAGG | 58.869 | 42.308 | 0.00 | 0.00 | 39.96 | 3.61 |
939 | 958 | 1.332997 | GACGCCGTAGTAGCAGTGTAT | 59.667 | 52.381 | 0.00 | 0.00 | 0.00 | 2.29 |
982 | 1001 | 4.426112 | CTCGTCTGCTCTGCCGCA | 62.426 | 66.667 | 0.00 | 0.00 | 38.40 | 5.69 |
1072 | 1091 | 2.792370 | AGGAGGAGGATAGTTGGCTAGA | 59.208 | 50.000 | 0.00 | 0.00 | 0.00 | 2.43 |
1188 | 1210 | 0.325203 | GGCTCCTCAAGTCCTCCTCT | 60.325 | 60.000 | 0.00 | 0.00 | 0.00 | 3.69 |
1194 | 1216 | 0.908198 | AGATGTGGCTCCTCAAGTCC | 59.092 | 55.000 | 0.00 | 0.00 | 0.00 | 3.85 |
1405 | 1427 | 1.507141 | CGCTCGACAAAACCCTTGCT | 61.507 | 55.000 | 0.00 | 0.00 | 0.00 | 3.91 |
1416 | 1438 | 1.542472 | TCTGTACCAAATCGCTCGACA | 59.458 | 47.619 | 0.00 | 0.00 | 0.00 | 4.35 |
1419 | 1441 | 5.291128 | ACTTAAATCTGTACCAAATCGCTCG | 59.709 | 40.000 | 0.00 | 0.00 | 0.00 | 5.03 |
1480 | 1502 | 4.868172 | TCATCACCATTTCCAAGGAGAT | 57.132 | 40.909 | 0.00 | 0.00 | 35.93 | 2.75 |
1481 | 1503 | 4.656100 | TTCATCACCATTTCCAAGGAGA | 57.344 | 40.909 | 0.00 | 0.00 | 0.00 | 3.71 |
1482 | 1504 | 5.186409 | ACATTTCATCACCATTTCCAAGGAG | 59.814 | 40.000 | 0.00 | 0.00 | 0.00 | 3.69 |
1484 | 1506 | 5.410355 | ACATTTCATCACCATTTCCAAGG | 57.590 | 39.130 | 0.00 | 0.00 | 0.00 | 3.61 |
1539 | 1562 | 5.652014 | TCCATACAGAAAAATTGGCTACCTG | 59.348 | 40.000 | 0.00 | 0.00 | 0.00 | 4.00 |
1624 | 1649 | 4.672409 | GACTTGGAATTTGGAAATAGGCG | 58.328 | 43.478 | 0.00 | 0.00 | 0.00 | 5.52 |
1643 | 1693 | 4.586841 | TGGAAATGGAAATTTTGGTCGACT | 59.413 | 37.500 | 16.46 | 0.00 | 0.00 | 4.18 |
1644 | 1694 | 4.877282 | TGGAAATGGAAATTTTGGTCGAC | 58.123 | 39.130 | 7.13 | 7.13 | 0.00 | 4.20 |
1645 | 1695 | 5.011533 | ACATGGAAATGGAAATTTTGGTCGA | 59.988 | 36.000 | 0.00 | 0.00 | 0.00 | 4.20 |
1646 | 1696 | 5.237048 | ACATGGAAATGGAAATTTTGGTCG | 58.763 | 37.500 | 0.00 | 0.00 | 0.00 | 4.79 |
1647 | 1697 | 6.568271 | GCAACATGGAAATGGAAATTTTGGTC | 60.568 | 38.462 | 0.00 | 0.00 | 0.00 | 4.02 |
1648 | 1698 | 5.241285 | GCAACATGGAAATGGAAATTTTGGT | 59.759 | 36.000 | 0.00 | 0.00 | 0.00 | 3.67 |
1649 | 1699 | 5.241064 | TGCAACATGGAAATGGAAATTTTGG | 59.759 | 36.000 | 0.00 | 0.00 | 0.00 | 3.28 |
1650 | 1700 | 6.315091 | TGCAACATGGAAATGGAAATTTTG | 57.685 | 33.333 | 0.00 | 0.00 | 0.00 | 2.44 |
1651 | 1701 | 8.810990 | ATATGCAACATGGAAATGGAAATTTT | 57.189 | 26.923 | 0.00 | 0.00 | 0.00 | 1.82 |
1652 | 1702 | 8.810990 | AATATGCAACATGGAAATGGAAATTT | 57.189 | 26.923 | 0.00 | 0.00 | 0.00 | 1.82 |
1653 | 1703 | 8.810990 | AAATATGCAACATGGAAATGGAAATT | 57.189 | 26.923 | 0.00 | 0.00 | 0.00 | 1.82 |
1654 | 1704 | 8.047911 | TGAAATATGCAACATGGAAATGGAAAT | 58.952 | 29.630 | 0.00 | 0.00 | 0.00 | 2.17 |
1655 | 1705 | 7.333921 | GTGAAATATGCAACATGGAAATGGAAA | 59.666 | 33.333 | 0.00 | 0.00 | 0.00 | 3.13 |
1656 | 1706 | 6.817641 | GTGAAATATGCAACATGGAAATGGAA | 59.182 | 34.615 | 0.00 | 0.00 | 0.00 | 3.53 |
1657 | 1707 | 6.339730 | GTGAAATATGCAACATGGAAATGGA | 58.660 | 36.000 | 0.00 | 0.00 | 0.00 | 3.41 |
1658 | 1708 | 5.232626 | CGTGAAATATGCAACATGGAAATGG | 59.767 | 40.000 | 0.00 | 0.00 | 0.00 | 3.16 |
1659 | 1709 | 5.806502 | ACGTGAAATATGCAACATGGAAATG | 59.193 | 36.000 | 0.00 | 0.00 | 0.00 | 2.32 |
1660 | 1710 | 5.964758 | ACGTGAAATATGCAACATGGAAAT | 58.035 | 33.333 | 0.00 | 0.00 | 0.00 | 2.17 |
1661 | 1711 | 5.384063 | ACGTGAAATATGCAACATGGAAA | 57.616 | 34.783 | 0.00 | 0.00 | 0.00 | 3.13 |
1662 | 1712 | 5.159925 | CAACGTGAAATATGCAACATGGAA | 58.840 | 37.500 | 0.00 | 0.00 | 0.00 | 3.53 |
1663 | 1713 | 4.380339 | CCAACGTGAAATATGCAACATGGA | 60.380 | 41.667 | 0.00 | 0.00 | 0.00 | 3.41 |
1664 | 1714 | 3.858812 | CCAACGTGAAATATGCAACATGG | 59.141 | 43.478 | 0.00 | 0.00 | 0.00 | 3.66 |
1665 | 1715 | 4.731720 | TCCAACGTGAAATATGCAACATG | 58.268 | 39.130 | 0.00 | 0.00 | 0.00 | 3.21 |
1666 | 1716 | 5.105797 | ACATCCAACGTGAAATATGCAACAT | 60.106 | 36.000 | 0.00 | 0.00 | 0.00 | 2.71 |
1670 | 1720 | 4.457257 | TCAACATCCAACGTGAAATATGCA | 59.543 | 37.500 | 0.00 | 0.00 | 0.00 | 3.96 |
1673 | 1723 | 4.398044 | GGGTCAACATCCAACGTGAAATAT | 59.602 | 41.667 | 0.00 | 0.00 | 0.00 | 1.28 |
1823 | 1874 | 7.302184 | AGCTTGGAAGGAGACTCTATATAACT | 58.698 | 38.462 | 1.74 | 0.00 | 42.68 | 2.24 |
1842 | 1893 | 7.065563 | GGAGTATTAGAATGATGCATAGCTTGG | 59.934 | 40.741 | 0.00 | 0.00 | 0.00 | 3.61 |
1911 | 1962 | 3.495753 | CGCGGTTTTGAACTAAGGTTAGT | 59.504 | 43.478 | 0.00 | 0.00 | 45.43 | 2.24 |
1912 | 1963 | 3.742369 | TCGCGGTTTTGAACTAAGGTTAG | 59.258 | 43.478 | 6.13 | 0.00 | 35.58 | 2.34 |
1913 | 1964 | 3.494251 | GTCGCGGTTTTGAACTAAGGTTA | 59.506 | 43.478 | 6.13 | 0.00 | 35.58 | 2.85 |
1914 | 1965 | 2.288729 | GTCGCGGTTTTGAACTAAGGTT | 59.711 | 45.455 | 6.13 | 0.00 | 38.52 | 3.50 |
1915 | 1966 | 1.869132 | GTCGCGGTTTTGAACTAAGGT | 59.131 | 47.619 | 6.13 | 0.00 | 0.00 | 3.50 |
1916 | 1967 | 1.196127 | GGTCGCGGTTTTGAACTAAGG | 59.804 | 52.381 | 6.13 | 0.00 | 0.00 | 2.69 |
1917 | 1968 | 2.140717 | AGGTCGCGGTTTTGAACTAAG | 58.859 | 47.619 | 6.13 | 0.00 | 28.21 | 2.18 |
1918 | 1969 | 2.243602 | AGGTCGCGGTTTTGAACTAA | 57.756 | 45.000 | 6.13 | 0.00 | 28.21 | 2.24 |
1919 | 1970 | 2.243602 | AAGGTCGCGGTTTTGAACTA | 57.756 | 45.000 | 6.13 | 0.00 | 30.35 | 2.24 |
1920 | 1971 | 1.869132 | GTAAGGTCGCGGTTTTGAACT | 59.131 | 47.619 | 6.13 | 0.00 | 32.31 | 3.01 |
1921 | 1972 | 1.869132 | AGTAAGGTCGCGGTTTTGAAC | 59.131 | 47.619 | 6.13 | 0.00 | 0.00 | 3.18 |
1922 | 1973 | 2.243602 | AGTAAGGTCGCGGTTTTGAA | 57.756 | 45.000 | 6.13 | 0.00 | 0.00 | 2.69 |
1923 | 1974 | 2.243602 | AAGTAAGGTCGCGGTTTTGA | 57.756 | 45.000 | 6.13 | 0.00 | 0.00 | 2.69 |
1924 | 1975 | 2.603652 | CCAAAGTAAGGTCGCGGTTTTG | 60.604 | 50.000 | 6.13 | 7.01 | 0.00 | 2.44 |
1925 | 1976 | 1.605232 | CCAAAGTAAGGTCGCGGTTTT | 59.395 | 47.619 | 6.13 | 0.27 | 0.00 | 2.43 |
1926 | 1977 | 1.202675 | TCCAAAGTAAGGTCGCGGTTT | 60.203 | 47.619 | 6.13 | 0.68 | 0.00 | 3.27 |
1927 | 1978 | 0.393820 | TCCAAAGTAAGGTCGCGGTT | 59.606 | 50.000 | 6.13 | 0.00 | 0.00 | 4.44 |
1928 | 1979 | 0.611714 | ATCCAAAGTAAGGTCGCGGT | 59.388 | 50.000 | 6.13 | 0.00 | 0.00 | 5.68 |
1929 | 1980 | 1.287425 | GATCCAAAGTAAGGTCGCGG | 58.713 | 55.000 | 6.13 | 0.00 | 0.00 | 6.46 |
1930 | 1981 | 0.921347 | CGATCCAAAGTAAGGTCGCG | 59.079 | 55.000 | 0.00 | 0.00 | 0.00 | 5.87 |
1931 | 1982 | 1.134907 | TCCGATCCAAAGTAAGGTCGC | 60.135 | 52.381 | 0.00 | 0.00 | 32.28 | 5.19 |
1932 | 1983 | 2.481449 | CCTCCGATCCAAAGTAAGGTCG | 60.481 | 54.545 | 0.00 | 0.00 | 32.93 | 4.79 |
1933 | 1984 | 2.158943 | CCCTCCGATCCAAAGTAAGGTC | 60.159 | 54.545 | 0.00 | 0.00 | 0.00 | 3.85 |
1934 | 1985 | 1.838077 | CCCTCCGATCCAAAGTAAGGT | 59.162 | 52.381 | 0.00 | 0.00 | 0.00 | 3.50 |
1935 | 1986 | 2.103263 | CTCCCTCCGATCCAAAGTAAGG | 59.897 | 54.545 | 0.00 | 0.00 | 0.00 | 2.69 |
1936 | 1987 | 2.766828 | ACTCCCTCCGATCCAAAGTAAG | 59.233 | 50.000 | 0.00 | 0.00 | 0.00 | 2.34 |
1937 | 1988 | 2.829023 | ACTCCCTCCGATCCAAAGTAA | 58.171 | 47.619 | 0.00 | 0.00 | 0.00 | 2.24 |
1938 | 1989 | 2.544844 | ACTCCCTCCGATCCAAAGTA | 57.455 | 50.000 | 0.00 | 0.00 | 0.00 | 2.24 |
1939 | 1990 | 2.389715 | CTACTCCCTCCGATCCAAAGT | 58.610 | 52.381 | 0.00 | 0.00 | 0.00 | 2.66 |
1940 | 1991 | 1.069358 | GCTACTCCCTCCGATCCAAAG | 59.931 | 57.143 | 0.00 | 0.00 | 0.00 | 2.77 |
1941 | 1992 | 1.120530 | GCTACTCCCTCCGATCCAAA | 58.879 | 55.000 | 0.00 | 0.00 | 0.00 | 3.28 |
1942 | 1993 | 0.032515 | TGCTACTCCCTCCGATCCAA | 60.033 | 55.000 | 0.00 | 0.00 | 0.00 | 3.53 |
1943 | 1994 | 0.188587 | ATGCTACTCCCTCCGATCCA | 59.811 | 55.000 | 0.00 | 0.00 | 0.00 | 3.41 |
1944 | 1995 | 1.343069 | AATGCTACTCCCTCCGATCC | 58.657 | 55.000 | 0.00 | 0.00 | 0.00 | 3.36 |
1945 | 1996 | 4.021016 | ACATAAATGCTACTCCCTCCGATC | 60.021 | 45.833 | 0.00 | 0.00 | 0.00 | 3.69 |
1946 | 1997 | 3.904339 | ACATAAATGCTACTCCCTCCGAT | 59.096 | 43.478 | 0.00 | 0.00 | 0.00 | 4.18 |
1947 | 1998 | 3.069586 | CACATAAATGCTACTCCCTCCGA | 59.930 | 47.826 | 0.00 | 0.00 | 0.00 | 4.55 |
1948 | 1999 | 3.393800 | CACATAAATGCTACTCCCTCCG | 58.606 | 50.000 | 0.00 | 0.00 | 0.00 | 4.63 |
1949 | 2000 | 3.142174 | GCACATAAATGCTACTCCCTCC | 58.858 | 50.000 | 0.00 | 0.00 | 42.62 | 4.30 |
1969 | 2020 | 4.870363 | TGGCAAAACAAGATCACTAAAGC | 58.130 | 39.130 | 0.00 | 0.00 | 0.00 | 3.51 |
1984 | 2035 | 3.766068 | TTCCAATCAGCAATGGCAAAA | 57.234 | 38.095 | 0.00 | 0.00 | 44.61 | 2.44 |
1990 | 2041 | 3.760151 | TGTCTCCTTTCCAATCAGCAATG | 59.240 | 43.478 | 0.00 | 0.00 | 0.00 | 2.82 |
2014 | 2065 | 2.093764 | ACTCAGCACTACATGAGCTTCC | 60.094 | 50.000 | 0.00 | 0.00 | 45.56 | 3.46 |
2018 | 2069 | 1.480137 | AGGACTCAGCACTACATGAGC | 59.520 | 52.381 | 0.00 | 0.00 | 45.56 | 4.26 |
2049 | 2100 | 5.413833 | CCTCATGACTCAGCACTACATTTTT | 59.586 | 40.000 | 0.00 | 0.00 | 0.00 | 1.94 |
2050 | 2101 | 4.940046 | CCTCATGACTCAGCACTACATTTT | 59.060 | 41.667 | 0.00 | 0.00 | 0.00 | 1.82 |
2051 | 2102 | 4.223700 | TCCTCATGACTCAGCACTACATTT | 59.776 | 41.667 | 0.00 | 0.00 | 0.00 | 2.32 |
2052 | 2103 | 3.771479 | TCCTCATGACTCAGCACTACATT | 59.229 | 43.478 | 0.00 | 0.00 | 0.00 | 2.71 |
2053 | 2104 | 3.369175 | TCCTCATGACTCAGCACTACAT | 58.631 | 45.455 | 0.00 | 0.00 | 0.00 | 2.29 |
2054 | 2105 | 2.757314 | CTCCTCATGACTCAGCACTACA | 59.243 | 50.000 | 0.00 | 0.00 | 0.00 | 2.74 |
2055 | 2106 | 2.481104 | GCTCCTCATGACTCAGCACTAC | 60.481 | 54.545 | 9.84 | 0.00 | 0.00 | 2.73 |
2056 | 2107 | 1.753649 | GCTCCTCATGACTCAGCACTA | 59.246 | 52.381 | 9.84 | 0.00 | 0.00 | 2.74 |
2057 | 2108 | 0.536260 | GCTCCTCATGACTCAGCACT | 59.464 | 55.000 | 9.84 | 0.00 | 0.00 | 4.40 |
2058 | 2109 | 0.536260 | AGCTCCTCATGACTCAGCAC | 59.464 | 55.000 | 15.04 | 0.00 | 32.17 | 4.40 |
2059 | 2110 | 0.535797 | CAGCTCCTCATGACTCAGCA | 59.464 | 55.000 | 15.04 | 0.00 | 32.17 | 4.41 |
2060 | 2111 | 0.536260 | ACAGCTCCTCATGACTCAGC | 59.464 | 55.000 | 7.45 | 7.45 | 0.00 | 4.26 |
2208 | 2259 | 8.682710 | TGAGTTTGTAAACAAGATAAAGTGCTT | 58.317 | 29.630 | 9.85 | 0.00 | 41.30 | 3.91 |
2372 | 2427 | 9.828852 | GACGGACATAACTCTTCTACTAATATG | 57.171 | 37.037 | 0.00 | 0.00 | 0.00 | 1.78 |
2468 | 2523 | 3.748083 | AGCAATGCAAAGAGACAGAGAA | 58.252 | 40.909 | 8.35 | 0.00 | 0.00 | 2.87 |
2497 | 2556 | 8.259411 | TCCTGTTTATAAGCATTTCGTAGGTAA | 58.741 | 33.333 | 2.21 | 0.00 | 0.00 | 2.85 |
2541 | 2600 | 6.775939 | TCTTGAATGAGAAATATAGCAGCG | 57.224 | 37.500 | 0.00 | 0.00 | 0.00 | 5.18 |
2557 | 2616 | 6.763135 | GCCCTTTCTTCTTGTTTTTCTTGAAT | 59.237 | 34.615 | 0.00 | 0.00 | 0.00 | 2.57 |
2598 | 2659 | 5.344884 | GCTACCTGCAAAACACAAAGTTAA | 58.655 | 37.500 | 0.00 | 0.00 | 39.73 | 2.01 |
2627 | 2688 | 7.174107 | TCAGACTCATGATGTGTCTTCATAA | 57.826 | 36.000 | 23.11 | 7.90 | 45.58 | 1.90 |
2628 | 2689 | 6.780457 | TCAGACTCATGATGTGTCTTCATA | 57.220 | 37.500 | 23.11 | 9.87 | 45.58 | 2.15 |
2746 | 2807 | 1.251251 | GCTTCCAGTGATTTGGCTGT | 58.749 | 50.000 | 0.00 | 0.00 | 38.16 | 4.40 |
2776 | 2837 | 2.097036 | TCGAGCGTAAGAATGGAGGAA | 58.903 | 47.619 | 0.00 | 0.00 | 43.02 | 3.36 |
2787 | 2848 | 6.143496 | GTCTATCATCTTTGATCGAGCGTAA | 58.857 | 40.000 | 0.00 | 0.00 | 41.73 | 3.18 |
2790 | 2851 | 4.540824 | TGTCTATCATCTTTGATCGAGCG | 58.459 | 43.478 | 0.00 | 0.00 | 41.73 | 5.03 |
2817 | 2878 | 3.580022 | TCATTCTCTGAAACAGCCTCTCA | 59.420 | 43.478 | 0.00 | 0.00 | 0.00 | 3.27 |
2853 | 2914 | 3.388024 | TGTAGACCAGGACATCAATAGGC | 59.612 | 47.826 | 0.00 | 0.00 | 0.00 | 3.93 |
2890 | 2951 | 2.802816 | GCTCGCCCACAGAAATATACAG | 59.197 | 50.000 | 0.00 | 0.00 | 0.00 | 2.74 |
2904 | 2965 | 1.300481 | GAACCTTATCAAGCTCGCCC | 58.700 | 55.000 | 0.00 | 0.00 | 0.00 | 6.13 |
2934 | 2995 | 3.667960 | CGTTTTGCCTCTTCAATTCCTCG | 60.668 | 47.826 | 0.00 | 0.00 | 0.00 | 4.63 |
2955 | 3016 | 3.186909 | TGTGAATAGATCTGGCGAAACG | 58.813 | 45.455 | 5.18 | 0.00 | 0.00 | 3.60 |
2961 | 3022 | 5.615289 | AGGTTGTATGTGAATAGATCTGGC | 58.385 | 41.667 | 5.18 | 0.00 | 0.00 | 4.85 |
3042 | 3103 | 4.508662 | AGTTCGGATCTTTTGACATCTCC | 58.491 | 43.478 | 0.00 | 0.00 | 0.00 | 3.71 |
3075 | 3136 | 1.069668 | AGGTTTCGGTACAGTGTCCAC | 59.930 | 52.381 | 0.00 | 0.00 | 0.00 | 4.02 |
3111 | 3172 | 0.038021 | TAACAAGCTGGCTGGCATCA | 59.962 | 50.000 | 3.74 | 0.00 | 34.17 | 3.07 |
3150 | 3211 | 1.067821 | CTAATCTTCGCCTCGGCTTCT | 59.932 | 52.381 | 6.35 | 0.00 | 39.32 | 2.85 |
3180 | 3241 | 3.819337 | CGAGGAGATCGTAGGTTATCCAA | 59.181 | 47.826 | 9.23 | 0.00 | 46.62 | 3.53 |
3240 | 3301 | 4.756642 | TGCATCGATTTCCATATGTCCTTC | 59.243 | 41.667 | 0.00 | 0.00 | 0.00 | 3.46 |
3270 | 3331 | 1.781786 | GACTAGTCATCCTCTGGGCA | 58.218 | 55.000 | 18.20 | 0.00 | 0.00 | 5.36 |
3288 | 3349 | 0.457853 | GCACGCAGACATAGTTCCGA | 60.458 | 55.000 | 0.00 | 0.00 | 0.00 | 4.55 |
3312 | 3373 | 1.447217 | CCCGCACATCAGATAGGCA | 59.553 | 57.895 | 6.35 | 0.00 | 0.00 | 4.75 |
3379 | 3440 | 1.067495 | GGAGACGTCAAACTCTGGGAG | 60.067 | 57.143 | 19.50 | 0.00 | 35.52 | 4.30 |
3394 | 3455 | 2.743928 | CCTGTTGCAGGCGGAGAC | 60.744 | 66.667 | 1.93 | 0.00 | 45.13 | 3.36 |
3423 | 3484 | 4.729918 | AAGCCGGCAGCCAGAAGG | 62.730 | 66.667 | 31.54 | 5.38 | 45.47 | 3.46 |
3444 | 3505 | 0.103572 | TAAAGCTATCCGCCGTGTCC | 59.896 | 55.000 | 0.00 | 0.00 | 40.39 | 4.02 |
3568 | 3631 | 7.234782 | TCCATTATTCTCGTACCATAAGTCCAT | 59.765 | 37.037 | 0.00 | 0.00 | 0.00 | 3.41 |
3569 | 3632 | 6.551975 | TCCATTATTCTCGTACCATAAGTCCA | 59.448 | 38.462 | 0.00 | 0.00 | 0.00 | 4.02 |
3570 | 3633 | 6.867293 | GTCCATTATTCTCGTACCATAAGTCC | 59.133 | 42.308 | 0.00 | 0.00 | 0.00 | 3.85 |
3571 | 3634 | 7.659186 | AGTCCATTATTCTCGTACCATAAGTC | 58.341 | 38.462 | 0.00 | 0.00 | 0.00 | 3.01 |
3572 | 3635 | 7.255871 | GGAGTCCATTATTCTCGTACCATAAGT | 60.256 | 40.741 | 3.60 | 0.00 | 0.00 | 2.24 |
3573 | 3636 | 7.091443 | GGAGTCCATTATTCTCGTACCATAAG | 58.909 | 42.308 | 3.60 | 0.00 | 0.00 | 1.73 |
3574 | 3637 | 6.294342 | CGGAGTCCATTATTCTCGTACCATAA | 60.294 | 42.308 | 10.49 | 0.00 | 0.00 | 1.90 |
3575 | 3638 | 5.182570 | CGGAGTCCATTATTCTCGTACCATA | 59.817 | 44.000 | 10.49 | 0.00 | 0.00 | 2.74 |
3576 | 3639 | 4.022242 | CGGAGTCCATTATTCTCGTACCAT | 60.022 | 45.833 | 10.49 | 0.00 | 0.00 | 3.55 |
3598 | 3661 | 6.183360 | GCCAAAATAAAGCATAAACTGTTCCG | 60.183 | 38.462 | 0.00 | 0.00 | 0.00 | 4.30 |
3638 | 3701 | 2.017049 | GGCGCTTGACCTGACAATATT | 58.983 | 47.619 | 7.64 | 0.00 | 0.00 | 1.28 |
3652 | 3715 | 0.304705 | CTTTCGATATTGCGGCGCTT | 59.695 | 50.000 | 33.26 | 21.91 | 0.00 | 4.68 |
3767 | 3830 | 0.527565 | AAATTGTGACATGGCTCGGC | 59.472 | 50.000 | 0.00 | 0.00 | 0.00 | 5.54 |
3783 | 3846 | 6.879458 | CCAAACTGCTACTAGGAGTACAAAAT | 59.121 | 38.462 | 10.40 | 0.00 | 46.56 | 1.82 |
3784 | 3847 | 6.228258 | CCAAACTGCTACTAGGAGTACAAAA | 58.772 | 40.000 | 10.40 | 0.00 | 46.56 | 2.44 |
3849 | 4046 | 2.586635 | GAACCGTGGCACGTCACA | 60.587 | 61.111 | 34.74 | 0.00 | 40.58 | 3.58 |
3925 | 4122 | 0.108329 | TCAGCTTTAGCCGTACCTGC | 60.108 | 55.000 | 0.00 | 0.00 | 43.38 | 4.85 |
3958 | 4165 | 0.888736 | CAGGATGAACACGGGTGCAA | 60.889 | 55.000 | 0.43 | 0.00 | 39.69 | 4.08 |
3959 | 4166 | 1.302431 | CAGGATGAACACGGGTGCA | 60.302 | 57.895 | 0.00 | 0.00 | 39.69 | 4.57 |
3969 | 4176 | 0.247460 | CGTGAGCTCCACAGGATGAA | 59.753 | 55.000 | 12.15 | 0.00 | 45.98 | 2.57 |
3990 | 4197 | 6.178607 | TGTACAGATCATATGCCACTCAAT | 57.821 | 37.500 | 0.00 | 0.00 | 0.00 | 2.57 |
3991 | 4198 | 5.612725 | TGTACAGATCATATGCCACTCAA | 57.387 | 39.130 | 0.00 | 0.00 | 0.00 | 3.02 |
4008 | 4215 | 0.317160 | CCTCGTGGAGCAGTTGTACA | 59.683 | 55.000 | 0.00 | 0.00 | 34.57 | 2.90 |
4040 | 4251 | 0.037326 | TGAAGTGTGACCGATCAGGC | 60.037 | 55.000 | 3.85 | 0.00 | 46.52 | 4.85 |
4049 | 4260 | 3.812053 | AGAACAAGATGCTGAAGTGTGAC | 59.188 | 43.478 | 0.00 | 0.00 | 0.00 | 3.67 |
4064 | 4275 | 2.497138 | TGTGTGGAGCATGAGAACAAG | 58.503 | 47.619 | 0.00 | 0.00 | 0.00 | 3.16 |
4084 | 4296 | 1.477553 | CATGCTACACCTGGCCAAAT | 58.522 | 50.000 | 7.01 | 0.00 | 0.00 | 2.32 |
4085 | 4297 | 1.250154 | GCATGCTACACCTGGCCAAA | 61.250 | 55.000 | 11.37 | 0.00 | 0.00 | 3.28 |
4121 | 4485 | 7.342541 | TGGTTTTCATATGACATGGACAATCAT | 59.657 | 33.333 | 4.48 | 0.00 | 36.95 | 2.45 |
4122 | 4486 | 6.662663 | TGGTTTTCATATGACATGGACAATCA | 59.337 | 34.615 | 4.48 | 0.00 | 0.00 | 2.57 |
4123 | 4487 | 7.099266 | TGGTTTTCATATGACATGGACAATC | 57.901 | 36.000 | 4.48 | 0.00 | 0.00 | 2.67 |
4124 | 4488 | 6.664816 | ACTGGTTTTCATATGACATGGACAAT | 59.335 | 34.615 | 4.48 | 0.00 | 0.00 | 2.71 |
4151 | 4516 | 6.096987 | TCCTTAAACAAGCTCATCTAGATCGT | 59.903 | 38.462 | 1.03 | 0.00 | 0.00 | 3.73 |
4198 | 4563 | 2.269241 | GGGTGTGGTAGCTGAGGC | 59.731 | 66.667 | 0.00 | 0.00 | 39.06 | 4.70 |
4237 | 4602 | 7.501892 | TGCCATAATTGTAGAATGCAGTATCAA | 59.498 | 33.333 | 0.00 | 0.00 | 27.68 | 2.57 |
4289 | 4660 | 8.503196 | TGAATGCGATGCGATTATTAATACTTT | 58.497 | 29.630 | 0.00 | 0.00 | 0.00 | 2.66 |
4290 | 4661 | 8.028540 | TGAATGCGATGCGATTATTAATACTT | 57.971 | 30.769 | 0.00 | 0.00 | 0.00 | 2.24 |
4292 | 4663 | 7.423598 | CACTGAATGCGATGCGATTATTAATAC | 59.576 | 37.037 | 0.00 | 0.00 | 0.00 | 1.89 |
4383 | 4765 | 5.182001 | CACTTGCCTTTTGCTCTTGTAGTAT | 59.818 | 40.000 | 0.00 | 0.00 | 42.00 | 2.12 |
4385 | 4767 | 3.316308 | CACTTGCCTTTTGCTCTTGTAGT | 59.684 | 43.478 | 0.00 | 0.00 | 42.00 | 2.73 |
4444 | 4827 | 4.937201 | AATTCGCACCTTCCTTTTCTTT | 57.063 | 36.364 | 0.00 | 0.00 | 0.00 | 2.52 |
4445 | 4828 | 4.262036 | GGAAATTCGCACCTTCCTTTTCTT | 60.262 | 41.667 | 0.00 | 0.00 | 36.48 | 2.52 |
4446 | 4829 | 3.255888 | GGAAATTCGCACCTTCCTTTTCT | 59.744 | 43.478 | 0.00 | 0.00 | 36.48 | 2.52 |
4447 | 4830 | 3.575630 | GGAAATTCGCACCTTCCTTTTC | 58.424 | 45.455 | 0.00 | 0.00 | 36.48 | 2.29 |
Based at the University of Bristol with support from BBSRC.
AutoCloner maintained by Alex Coulton.