Multiple sequence alignment - TraesCS2B01G336000

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G336000 chr2B 100.000 4188 0 0 1 4188 480066104 480070291 0.000000e+00 7734
1 TraesCS2B01G336000 chr2B 88.060 201 20 4 3837 4034 480067130 480067329 7.000000e-58 235
2 TraesCS2B01G336000 chr2B 88.060 201 20 4 1027 1226 480069940 480070137 7.000000e-58 235
3 TraesCS2B01G336000 chr2D 91.504 2401 125 44 562 2922 405179054 405181415 0.000000e+00 3230
4 TraesCS2B01G336000 chr2D 89.127 699 36 21 3506 4188 405182375 405183049 0.000000e+00 833
5 TraesCS2B01G336000 chr2D 91.972 573 29 6 2914 3475 405181594 405182160 0.000000e+00 787
6 TraesCS2B01G336000 chr2D 87.562 201 21 4 3837 4034 405179526 405179725 3.260000e-56 230
7 TraesCS2B01G336000 chr2D 84.080 201 17 5 1027 1226 405182706 405182892 3.330000e-41 180
8 TraesCS2B01G336000 chr2A 89.395 1952 151 20 1372 3298 543182711 543184631 0.000000e+00 2407
9 TraesCS2B01G336000 chr2A 91.811 635 34 16 3504 4127 543185701 543186328 0.000000e+00 869
10 TraesCS2B01G336000 chr2A 88.889 720 33 11 619 1324 543182024 543182710 0.000000e+00 843
11 TraesCS2B01G336000 chr2A 92.593 81 6 0 3319 3399 543184827 543184907 2.650000e-22 117
12 TraesCS2B01G336000 chr3B 95.114 307 15 0 239 545 344956721 344956415 6.300000e-133 484
13 TraesCS2B01G336000 chr3B 93.831 308 19 0 237 544 369098419 369098112 8.200000e-127 464
14 TraesCS2B01G336000 chr5B 93.910 312 19 0 233 544 44770997 44771308 4.900000e-129 472
15 TraesCS2B01G336000 chr5B 94.118 306 18 0 239 544 478698823 478699128 2.280000e-127 466
16 TraesCS2B01G336000 chr5B 93.464 306 20 0 239 544 322151871 322151566 4.940000e-124 455
17 TraesCS2B01G336000 chr5B 92.857 308 22 0 237 544 626092452 626092759 8.260000e-122 448
18 TraesCS2B01G336000 chr7B 93.464 306 20 0 239 544 60241818 60241513 4.940000e-124 455
19 TraesCS2B01G336000 chr6B 93.137 306 21 0 239 544 696413858 696413553 2.300000e-122 449
20 TraesCS2B01G336000 chr4B 92.581 310 23 0 235 544 646137447 646137138 2.970000e-121 446
21 TraesCS2B01G336000 chr7A 84.091 352 39 12 1475 1815 720951138 720950793 1.450000e-84 324


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G336000 chr2B 480066104 480070291 4187 False 2734.666667 7734 92.040 1 4188 3 chr2B.!!$F1 4187
1 TraesCS2B01G336000 chr2D 405179054 405183049 3995 False 1052.000000 3230 88.849 562 4188 5 chr2D.!!$F1 3626
2 TraesCS2B01G336000 chr2A 543182024 543186328 4304 False 1059.000000 2407 90.672 619 4127 4 chr2A.!!$F1 3508

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
160 161 0.034186 ACCATTCATCCGGTGCATGT 60.034 50.000 0.00 0.00 33.05 3.21 F
294 295 0.035317 GCATGCCATGTAGGATCGGA 59.965 55.000 6.36 0.00 41.22 4.55 F
587 588 0.040958 GAATCACGCGGAATCCATGC 60.041 55.000 12.47 0.00 0.00 4.06 F
595 596 0.179100 CGGAATCCATGCGTCTCTGT 60.179 55.000 0.00 0.00 38.18 3.41 F
1341 1386 1.003718 GTGGAGCCAGTGGTACCAC 60.004 63.158 33.72 33.72 46.50 4.16 F
1954 2000 1.056660 TCCCCTCGCTTCACTTTCTT 58.943 50.000 0.00 0.00 0.00 2.52 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1365 1410 0.179000 CCGACATTCTGGGGAGAAGG 59.821 60.000 0.00 0.0 35.91 3.46 R
1561 1606 1.123928 GGGTAGAGGTGATCCCAGTG 58.876 60.000 3.45 0.0 39.68 3.66 R
2547 2605 1.001393 CCGGTGTGTTAATGGCCCT 60.001 57.895 0.00 0.0 0.00 5.19 R
2550 2608 4.443913 AATAAACCGGTGTGTTAATGGC 57.556 40.909 8.52 0.0 0.00 4.40 R
2646 2704 1.029947 GGCCCTTTGGGTGACGTATG 61.030 60.000 4.42 0.0 46.51 2.39 R
3805 5070 1.590147 CGCCGTCTAGTTCCAAGGT 59.410 57.895 0.00 0.0 0.00 3.50 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
26 27 8.172484 TCGAACACCATAAATGTTATTTCTTCG 58.828 33.333 0.00 0.00 40.36 3.79
27 28 7.044966 CGAACACCATAAATGTTATTTCTTCGC 60.045 37.037 0.00 0.00 40.36 4.70
28 29 6.255215 ACACCATAAATGTTATTTCTTCGCG 58.745 36.000 0.00 0.00 0.00 5.87
29 30 6.092944 ACACCATAAATGTTATTTCTTCGCGA 59.907 34.615 3.71 3.71 0.00 5.87
30 31 6.964370 CACCATAAATGTTATTTCTTCGCGAA 59.036 34.615 22.01 22.01 0.00 4.70
31 32 7.483375 CACCATAAATGTTATTTCTTCGCGAAA 59.517 33.333 23.54 8.74 45.08 3.46
32 33 7.483691 ACCATAAATGTTATTTCTTCGCGAAAC 59.516 33.333 23.54 16.71 43.90 2.78
33 34 7.044314 CCATAAATGTTATTTCTTCGCGAAACC 60.044 37.037 23.54 0.08 43.90 3.27
34 35 5.622770 AATGTTATTTCTTCGCGAAACCT 57.377 34.783 23.54 7.01 43.90 3.50
35 36 4.657075 TGTTATTTCTTCGCGAAACCTC 57.343 40.909 23.54 9.91 43.90 3.85
36 37 4.059511 TGTTATTTCTTCGCGAAACCTCA 58.940 39.130 23.54 12.20 43.90 3.86
37 38 4.084223 TGTTATTTCTTCGCGAAACCTCAC 60.084 41.667 23.54 14.82 43.90 3.51
38 39 1.942677 TTTCTTCGCGAAACCTCACA 58.057 45.000 23.54 0.00 36.72 3.58
39 40 1.214367 TTCTTCGCGAAACCTCACAC 58.786 50.000 23.54 0.00 0.00 3.82
40 41 0.937699 TCTTCGCGAAACCTCACACG 60.938 55.000 23.54 7.79 0.00 4.49
41 42 1.213094 CTTCGCGAAACCTCACACGT 61.213 55.000 23.54 0.00 0.00 4.49
42 43 1.484227 TTCGCGAAACCTCACACGTG 61.484 55.000 21.14 15.48 37.55 4.49
43 44 2.935955 GCGAAACCTCACACGTGG 59.064 61.111 21.57 9.11 0.00 4.94
44 45 2.604174 GCGAAACCTCACACGTGGG 61.604 63.158 21.57 17.59 0.00 4.61
45 46 1.068417 CGAAACCTCACACGTGGGA 59.932 57.895 21.32 21.32 31.13 4.37
46 47 0.320421 CGAAACCTCACACGTGGGAT 60.320 55.000 23.00 6.07 31.13 3.85
47 48 1.067425 CGAAACCTCACACGTGGGATA 60.067 52.381 23.00 0.00 31.13 2.59
48 49 2.618053 GAAACCTCACACGTGGGATAG 58.382 52.381 23.00 18.09 31.13 2.08
49 50 1.933021 AACCTCACACGTGGGATAGA 58.067 50.000 23.00 8.69 31.13 1.98
50 51 1.933021 ACCTCACACGTGGGATAGAA 58.067 50.000 23.00 0.00 31.13 2.10
51 52 1.549170 ACCTCACACGTGGGATAGAAC 59.451 52.381 23.00 0.00 31.13 3.01
52 53 1.548719 CCTCACACGTGGGATAGAACA 59.451 52.381 23.00 0.00 31.13 3.18
53 54 2.607187 CTCACACGTGGGATAGAACAC 58.393 52.381 23.00 0.00 31.13 3.32
54 55 2.231478 CTCACACGTGGGATAGAACACT 59.769 50.000 23.00 0.00 35.51 3.55
55 56 2.230508 TCACACGTGGGATAGAACACTC 59.769 50.000 18.52 0.00 35.51 3.51
56 57 1.201647 ACACGTGGGATAGAACACTCG 59.798 52.381 21.57 0.00 35.51 4.18
57 58 0.815734 ACGTGGGATAGAACACTCGG 59.184 55.000 0.00 0.00 35.05 4.63
58 59 0.815734 CGTGGGATAGAACACTCGGT 59.184 55.000 0.00 0.00 35.51 4.69
59 60 1.202268 CGTGGGATAGAACACTCGGTC 60.202 57.143 0.00 0.00 35.51 4.79
60 61 1.100510 TGGGATAGAACACTCGGTCG 58.899 55.000 0.00 0.00 0.00 4.79
61 62 0.248949 GGGATAGAACACTCGGTCGC 60.249 60.000 0.00 0.00 0.00 5.19
62 63 0.454600 GGATAGAACACTCGGTCGCA 59.545 55.000 0.00 0.00 0.00 5.10
63 64 1.067212 GGATAGAACACTCGGTCGCAT 59.933 52.381 0.00 0.00 0.00 4.73
64 65 2.481449 GGATAGAACACTCGGTCGCATT 60.481 50.000 0.00 0.00 0.00 3.56
65 66 2.736144 TAGAACACTCGGTCGCATTT 57.264 45.000 0.00 0.00 0.00 2.32
66 67 1.148310 AGAACACTCGGTCGCATTTG 58.852 50.000 0.00 0.00 0.00 2.32
67 68 0.865769 GAACACTCGGTCGCATTTGT 59.134 50.000 0.00 0.00 0.00 2.83
68 69 1.263217 GAACACTCGGTCGCATTTGTT 59.737 47.619 0.00 0.00 0.00 2.83
69 70 2.157834 ACACTCGGTCGCATTTGTTA 57.842 45.000 0.00 0.00 0.00 2.41
70 71 2.485903 ACACTCGGTCGCATTTGTTAA 58.514 42.857 0.00 0.00 0.00 2.01
71 72 2.478894 ACACTCGGTCGCATTTGTTAAG 59.521 45.455 0.00 0.00 0.00 1.85
72 73 2.734606 CACTCGGTCGCATTTGTTAAGA 59.265 45.455 0.00 0.00 0.00 2.10
73 74 2.993899 ACTCGGTCGCATTTGTTAAGAG 59.006 45.455 0.00 0.00 0.00 2.85
74 75 3.250744 CTCGGTCGCATTTGTTAAGAGA 58.749 45.455 0.00 0.00 0.00 3.10
75 76 3.655486 TCGGTCGCATTTGTTAAGAGAA 58.345 40.909 0.00 0.00 0.00 2.87
76 77 4.059511 TCGGTCGCATTTGTTAAGAGAAA 58.940 39.130 0.00 0.00 0.00 2.52
77 78 4.693566 TCGGTCGCATTTGTTAAGAGAAAT 59.306 37.500 0.00 0.00 0.00 2.17
78 79 5.022021 CGGTCGCATTTGTTAAGAGAAATC 58.978 41.667 0.00 0.00 0.00 2.17
79 80 5.390461 CGGTCGCATTTGTTAAGAGAAATCA 60.390 40.000 0.00 0.00 0.00 2.57
80 81 6.024049 GGTCGCATTTGTTAAGAGAAATCAG 58.976 40.000 0.00 0.00 0.00 2.90
81 82 6.348540 GGTCGCATTTGTTAAGAGAAATCAGT 60.349 38.462 0.00 0.00 0.00 3.41
82 83 7.078228 GTCGCATTTGTTAAGAGAAATCAGTT 58.922 34.615 0.00 0.00 0.00 3.16
83 84 7.591426 GTCGCATTTGTTAAGAGAAATCAGTTT 59.409 33.333 0.00 0.00 0.00 2.66
84 85 8.134895 TCGCATTTGTTAAGAGAAATCAGTTTT 58.865 29.630 0.00 0.00 0.00 2.43
85 86 8.755018 CGCATTTGTTAAGAGAAATCAGTTTTT 58.245 29.630 0.00 0.00 0.00 1.94
88 89 9.764363 ATTTGTTAAGAGAAATCAGTTTTTCCC 57.236 29.630 0.00 0.00 36.47 3.97
89 90 7.284919 TGTTAAGAGAAATCAGTTTTTCCCC 57.715 36.000 0.00 0.00 36.47 4.81
90 91 7.066781 TGTTAAGAGAAATCAGTTTTTCCCCT 58.933 34.615 0.00 0.00 36.47 4.79
91 92 8.221944 TGTTAAGAGAAATCAGTTTTTCCCCTA 58.778 33.333 0.00 0.00 36.47 3.53
92 93 9.074576 GTTAAGAGAAATCAGTTTTTCCCCTAA 57.925 33.333 0.00 0.00 36.47 2.69
93 94 9.649316 TTAAGAGAAATCAGTTTTTCCCCTAAA 57.351 29.630 0.00 0.00 36.47 1.85
94 95 8.547481 AAGAGAAATCAGTTTTTCCCCTAAAA 57.453 30.769 0.00 0.00 36.47 1.52
95 96 8.727100 AGAGAAATCAGTTTTTCCCCTAAAAT 57.273 30.769 0.00 0.00 36.94 1.82
96 97 9.822727 AGAGAAATCAGTTTTTCCCCTAAAATA 57.177 29.630 0.00 0.00 36.94 1.40
110 111 9.663365 TTCCCCTAAAATAAAGAAAGAAAAGGA 57.337 29.630 0.00 0.00 0.00 3.36
111 112 9.663365 TCCCCTAAAATAAAGAAAGAAAAGGAA 57.337 29.630 0.00 0.00 0.00 3.36
143 144 2.336554 TTTGTCAGAGCGTACGTACC 57.663 50.000 19.67 12.32 0.00 3.34
144 145 1.237533 TTGTCAGAGCGTACGTACCA 58.762 50.000 19.67 7.26 0.00 3.25
145 146 1.456296 TGTCAGAGCGTACGTACCAT 58.544 50.000 19.67 8.53 0.00 3.55
146 147 1.814394 TGTCAGAGCGTACGTACCATT 59.186 47.619 19.67 5.61 0.00 3.16
147 148 2.159476 TGTCAGAGCGTACGTACCATTC 60.159 50.000 19.67 13.85 0.00 2.67
148 149 2.086094 TCAGAGCGTACGTACCATTCA 58.914 47.619 19.67 0.00 0.00 2.57
149 150 2.686405 TCAGAGCGTACGTACCATTCAT 59.314 45.455 19.67 0.00 0.00 2.57
150 151 3.043586 CAGAGCGTACGTACCATTCATC 58.956 50.000 19.67 8.77 0.00 2.92
151 152 2.034305 AGAGCGTACGTACCATTCATCC 59.966 50.000 19.67 0.00 0.00 3.51
152 153 1.126079 GCGTACGTACCATTCATCCG 58.874 55.000 19.67 6.14 0.00 4.18
153 154 1.762419 CGTACGTACCATTCATCCGG 58.238 55.000 19.67 0.00 0.00 5.14
154 155 1.066002 CGTACGTACCATTCATCCGGT 59.934 52.381 19.67 0.00 39.41 5.28
155 156 2.466846 GTACGTACCATTCATCCGGTG 58.533 52.381 15.00 0.00 36.69 4.94
156 157 0.461339 ACGTACCATTCATCCGGTGC 60.461 55.000 0.00 0.00 36.69 5.01
157 158 0.461163 CGTACCATTCATCCGGTGCA 60.461 55.000 0.00 0.00 37.72 4.57
158 159 1.810031 CGTACCATTCATCCGGTGCAT 60.810 52.381 0.00 0.00 37.72 3.96
159 160 1.603802 GTACCATTCATCCGGTGCATG 59.396 52.381 0.00 5.56 37.77 4.06
160 161 0.034186 ACCATTCATCCGGTGCATGT 60.034 50.000 0.00 0.00 33.05 3.21
161 162 0.382873 CCATTCATCCGGTGCATGTG 59.617 55.000 0.00 0.00 30.61 3.21
162 163 1.097232 CATTCATCCGGTGCATGTGT 58.903 50.000 0.00 0.00 28.41 3.72
163 164 2.287769 CATTCATCCGGTGCATGTGTA 58.712 47.619 0.00 0.00 28.41 2.90
164 165 1.732941 TTCATCCGGTGCATGTGTAC 58.267 50.000 0.00 0.00 0.00 2.90
165 166 0.610687 TCATCCGGTGCATGTGTACA 59.389 50.000 0.00 0.00 32.02 2.90
166 167 0.726827 CATCCGGTGCATGTGTACAC 59.273 55.000 19.36 19.36 36.03 2.90
167 168 0.323302 ATCCGGTGCATGTGTACACA 59.677 50.000 29.70 29.70 46.44 3.72
168 169 0.320334 TCCGGTGCATGTGTACACAG 60.320 55.000 30.65 22.77 45.48 3.66
169 170 1.298157 CCGGTGCATGTGTACACAGG 61.298 60.000 30.93 30.93 45.48 4.00
170 171 0.602638 CGGTGCATGTGTACACAGGT 60.603 55.000 33.58 17.74 45.48 4.00
171 172 1.604604 GGTGCATGTGTACACAGGTT 58.395 50.000 33.58 17.06 45.48 3.50
172 173 1.535462 GGTGCATGTGTACACAGGTTC 59.465 52.381 33.58 26.29 45.48 3.62
173 174 2.217750 GTGCATGTGTACACAGGTTCA 58.782 47.619 33.58 23.98 45.48 3.18
174 175 2.032030 GTGCATGTGTACACAGGTTCAC 60.032 50.000 33.58 28.92 45.48 3.18
175 176 1.535462 GCATGTGTACACAGGTTCACC 59.465 52.381 33.58 17.98 45.48 4.02
176 177 1.798223 CATGTGTACACAGGTTCACCG 59.202 52.381 30.65 10.05 45.48 4.94
177 178 1.112950 TGTGTACACAGGTTCACCGA 58.887 50.000 24.62 0.00 42.61 4.69
178 179 1.067974 TGTGTACACAGGTTCACCGAG 59.932 52.381 24.62 0.00 42.61 4.63
179 180 1.068127 GTGTACACAGGTTCACCGAGT 59.932 52.381 21.14 0.00 38.82 4.18
180 181 1.338973 TGTACACAGGTTCACCGAGTC 59.661 52.381 0.00 0.00 42.08 3.36
181 182 0.963962 TACACAGGTTCACCGAGTCC 59.036 55.000 0.00 0.00 42.08 3.85
182 183 1.004918 CACAGGTTCACCGAGTCCC 60.005 63.158 0.00 0.00 42.08 4.46
183 184 1.152312 ACAGGTTCACCGAGTCCCT 60.152 57.895 0.00 0.00 42.08 4.20
184 185 0.113776 ACAGGTTCACCGAGTCCCTA 59.886 55.000 0.00 0.00 42.08 3.53
185 186 0.531200 CAGGTTCACCGAGTCCCTAC 59.469 60.000 0.00 0.00 42.08 3.18
186 187 0.408700 AGGTTCACCGAGTCCCTACT 59.591 55.000 0.00 0.00 42.08 2.57
187 188 1.203149 AGGTTCACCGAGTCCCTACTT 60.203 52.381 0.00 0.00 42.08 2.24
188 189 1.067071 GGTTCACCGAGTCCCTACTTG 60.067 57.143 0.00 0.00 35.56 3.16
189 190 1.617357 GTTCACCGAGTCCCTACTTGT 59.383 52.381 0.00 0.00 35.56 3.16
190 191 1.254026 TCACCGAGTCCCTACTTGTG 58.746 55.000 0.00 0.00 38.85 3.33
191 192 0.389948 CACCGAGTCCCTACTTGTGC 60.390 60.000 0.00 0.00 35.56 4.57
192 193 0.542232 ACCGAGTCCCTACTTGTGCT 60.542 55.000 0.00 0.00 35.56 4.40
193 194 0.108615 CCGAGTCCCTACTTGTGCTG 60.109 60.000 0.00 0.00 35.56 4.41
194 195 0.737715 CGAGTCCCTACTTGTGCTGC 60.738 60.000 0.00 0.00 35.56 5.25
195 196 0.610687 GAGTCCCTACTTGTGCTGCT 59.389 55.000 0.00 0.00 35.56 4.24
196 197 1.825474 GAGTCCCTACTTGTGCTGCTA 59.175 52.381 0.00 0.00 35.56 3.49
197 198 1.827969 AGTCCCTACTTGTGCTGCTAG 59.172 52.381 0.00 0.00 29.00 3.42
198 199 0.537188 TCCCTACTTGTGCTGCTAGC 59.463 55.000 8.10 8.10 42.82 3.42
199 200 0.462759 CCCTACTTGTGCTGCTAGCC 60.463 60.000 13.29 0.00 41.51 3.93
200 201 0.539051 CCTACTTGTGCTGCTAGCCT 59.461 55.000 13.29 0.00 41.51 4.58
201 202 1.649664 CTACTTGTGCTGCTAGCCTG 58.350 55.000 13.29 6.36 41.51 4.85
202 203 0.391661 TACTTGTGCTGCTAGCCTGC 60.392 55.000 19.04 19.04 41.51 4.85
203 204 1.376942 CTTGTGCTGCTAGCCTGCT 60.377 57.895 23.86 0.00 41.51 4.24
204 205 0.107993 CTTGTGCTGCTAGCCTGCTA 60.108 55.000 23.86 13.98 41.51 3.49
205 206 0.543277 TTGTGCTGCTAGCCTGCTAT 59.457 50.000 23.86 0.00 41.51 2.97
206 207 1.413118 TGTGCTGCTAGCCTGCTATA 58.587 50.000 23.86 11.83 41.51 1.31
207 208 1.973515 TGTGCTGCTAGCCTGCTATAT 59.026 47.619 23.86 0.00 41.51 0.86
208 209 3.165071 TGTGCTGCTAGCCTGCTATATA 58.835 45.455 23.86 6.93 41.51 0.86
209 210 3.578282 TGTGCTGCTAGCCTGCTATATAA 59.422 43.478 23.86 6.35 41.51 0.98
210 211 4.223700 TGTGCTGCTAGCCTGCTATATAAT 59.776 41.667 23.86 0.00 41.51 1.28
211 212 4.808364 GTGCTGCTAGCCTGCTATATAATC 59.192 45.833 23.86 7.00 41.51 1.75
212 213 4.141846 TGCTGCTAGCCTGCTATATAATCC 60.142 45.833 23.86 0.19 41.51 3.01
213 214 4.141846 GCTGCTAGCCTGCTATATAATCCA 60.142 45.833 13.29 0.00 34.48 3.41
214 215 5.454471 GCTGCTAGCCTGCTATATAATCCAT 60.454 44.000 13.29 0.00 34.48 3.41
215 216 5.922053 TGCTAGCCTGCTATATAATCCATG 58.078 41.667 13.29 0.00 0.00 3.66
216 217 5.426509 TGCTAGCCTGCTATATAATCCATGT 59.573 40.000 13.29 0.00 0.00 3.21
217 218 5.757320 GCTAGCCTGCTATATAATCCATGTG 59.243 44.000 2.29 0.00 0.00 3.21
218 219 6.407412 GCTAGCCTGCTATATAATCCATGTGA 60.407 42.308 2.29 0.00 0.00 3.58
219 220 6.572182 AGCCTGCTATATAATCCATGTGAT 57.428 37.500 0.00 0.00 34.22 3.06
220 221 6.966751 AGCCTGCTATATAATCCATGTGATT 58.033 36.000 12.25 12.25 45.64 2.57
221 222 7.052873 AGCCTGCTATATAATCCATGTGATTC 58.947 38.462 11.29 0.68 42.75 2.52
222 223 6.261826 GCCTGCTATATAATCCATGTGATTCC 59.738 42.308 11.29 0.09 42.75 3.01
223 224 6.481313 CCTGCTATATAATCCATGTGATTCCG 59.519 42.308 11.29 0.00 42.75 4.30
224 225 6.946340 TGCTATATAATCCATGTGATTCCGT 58.054 36.000 11.29 4.62 42.75 4.69
225 226 7.394016 TGCTATATAATCCATGTGATTCCGTT 58.606 34.615 11.29 2.00 42.75 4.44
226 227 7.882791 TGCTATATAATCCATGTGATTCCGTTT 59.117 33.333 11.29 1.60 42.75 3.60
227 228 8.391106 GCTATATAATCCATGTGATTCCGTTTC 58.609 37.037 11.29 0.00 42.75 2.78
228 229 9.435688 CTATATAATCCATGTGATTCCGTTTCA 57.564 33.333 11.29 0.00 42.75 2.69
229 230 8.690203 ATATAATCCATGTGATTCCGTTTCAA 57.310 30.769 11.29 0.00 42.75 2.69
230 231 4.970662 ATCCATGTGATTCCGTTTCAAG 57.029 40.909 0.00 0.00 0.00 3.02
231 232 2.487762 TCCATGTGATTCCGTTTCAAGC 59.512 45.455 0.00 0.00 0.00 4.01
232 233 2.415893 CCATGTGATTCCGTTTCAAGCC 60.416 50.000 0.00 0.00 0.00 4.35
233 234 2.270352 TGTGATTCCGTTTCAAGCCT 57.730 45.000 0.00 0.00 0.00 4.58
234 235 2.582052 TGTGATTCCGTTTCAAGCCTT 58.418 42.857 0.00 0.00 0.00 4.35
235 236 2.955660 TGTGATTCCGTTTCAAGCCTTT 59.044 40.909 0.00 0.00 0.00 3.11
236 237 3.383185 TGTGATTCCGTTTCAAGCCTTTT 59.617 39.130 0.00 0.00 0.00 2.27
237 238 4.580995 TGTGATTCCGTTTCAAGCCTTTTA 59.419 37.500 0.00 0.00 0.00 1.52
238 239 5.067936 TGTGATTCCGTTTCAAGCCTTTTAA 59.932 36.000 0.00 0.00 0.00 1.52
239 240 5.629435 GTGATTCCGTTTCAAGCCTTTTAAG 59.371 40.000 0.00 0.00 0.00 1.85
241 242 2.888414 TCCGTTTCAAGCCTTTTAAGGG 59.112 45.455 10.39 0.00 46.56 3.95
242 243 2.609491 CCGTTTCAAGCCTTTTAAGGGC 60.609 50.000 10.27 10.27 46.56 5.19
249 250 1.525941 GCCTTTTAAGGGCGTGTACA 58.474 50.000 1.52 0.00 46.56 2.90
250 251 1.881324 GCCTTTTAAGGGCGTGTACAA 59.119 47.619 1.52 0.00 46.56 2.41
251 252 2.490509 GCCTTTTAAGGGCGTGTACAAT 59.509 45.455 1.52 0.00 46.56 2.71
252 253 3.672241 GCCTTTTAAGGGCGTGTACAATG 60.672 47.826 1.52 0.00 46.56 2.82
253 254 3.498082 CTTTTAAGGGCGTGTACAATGC 58.502 45.455 11.84 11.84 40.36 3.56
254 255 2.186532 TTAAGGGCGTGTACAATGCA 57.813 45.000 19.51 0.00 43.13 3.96
255 256 2.411628 TAAGGGCGTGTACAATGCAT 57.588 45.000 19.51 0.00 43.13 3.96
256 257 2.411628 AAGGGCGTGTACAATGCATA 57.588 45.000 19.51 0.00 43.13 3.14
257 258 1.953559 AGGGCGTGTACAATGCATAG 58.046 50.000 19.51 0.00 43.13 2.23
258 259 0.307760 GGGCGTGTACAATGCATAGC 59.692 55.000 19.51 7.67 43.13 2.97
259 260 0.307760 GGCGTGTACAATGCATAGCC 59.692 55.000 19.51 11.97 43.13 3.93
260 261 1.299541 GCGTGTACAATGCATAGCCT 58.700 50.000 14.62 0.00 40.81 4.58
261 262 1.261619 GCGTGTACAATGCATAGCCTC 59.738 52.381 14.62 0.00 40.81 4.70
262 263 2.549926 CGTGTACAATGCATAGCCTCA 58.450 47.619 0.00 0.00 0.00 3.86
263 264 2.935849 CGTGTACAATGCATAGCCTCAA 59.064 45.455 0.00 0.00 0.00 3.02
264 265 3.001634 CGTGTACAATGCATAGCCTCAAG 59.998 47.826 0.00 0.00 0.00 3.02
265 266 3.313526 GTGTACAATGCATAGCCTCAAGG 59.686 47.826 0.00 0.00 38.53 3.61
266 267 2.814805 ACAATGCATAGCCTCAAGGT 57.185 45.000 0.00 0.00 37.57 3.50
267 268 2.372264 ACAATGCATAGCCTCAAGGTG 58.628 47.619 0.00 0.00 37.57 4.00
268 269 2.025981 ACAATGCATAGCCTCAAGGTGA 60.026 45.455 0.00 0.00 37.57 4.02
269 270 3.220110 CAATGCATAGCCTCAAGGTGAT 58.780 45.455 0.00 0.00 37.57 3.06
270 271 2.336945 TGCATAGCCTCAAGGTGATG 57.663 50.000 0.00 3.41 37.57 3.07
271 272 0.950116 GCATAGCCTCAAGGTGATGC 59.050 55.000 16.47 16.47 43.18 3.91
272 273 1.602311 CATAGCCTCAAGGTGATGCC 58.398 55.000 0.00 0.00 38.54 4.40
286 287 2.588989 TGCCTCGCATGCCATGTA 59.411 55.556 13.15 0.00 31.71 2.29
287 288 1.524393 TGCCTCGCATGCCATGTAG 60.524 57.895 13.15 4.55 31.71 2.74
288 289 2.256591 GCCTCGCATGCCATGTAGG 61.257 63.158 18.53 18.53 38.09 3.18
289 290 1.447217 CCTCGCATGCCATGTAGGA 59.553 57.895 18.19 8.22 41.22 2.94
290 291 0.035881 CCTCGCATGCCATGTAGGAT 59.964 55.000 18.19 0.00 41.22 3.24
291 292 1.436600 CTCGCATGCCATGTAGGATC 58.563 55.000 13.15 0.00 41.22 3.36
292 293 0.319813 TCGCATGCCATGTAGGATCG 60.320 55.000 13.15 0.23 41.22 3.69
293 294 1.293963 CGCATGCCATGTAGGATCGG 61.294 60.000 13.15 0.00 41.22 4.18
294 295 0.035317 GCATGCCATGTAGGATCGGA 59.965 55.000 6.36 0.00 41.22 4.55
295 296 1.339438 GCATGCCATGTAGGATCGGAT 60.339 52.381 6.36 0.00 41.22 4.18
296 297 2.353323 CATGCCATGTAGGATCGGATG 58.647 52.381 0.00 0.00 41.22 3.51
297 298 1.423584 TGCCATGTAGGATCGGATGT 58.576 50.000 0.00 0.00 41.22 3.06
298 299 1.070601 TGCCATGTAGGATCGGATGTG 59.929 52.381 0.00 0.00 41.22 3.21
299 300 1.344438 GCCATGTAGGATCGGATGTGA 59.656 52.381 0.00 0.00 41.22 3.58
300 301 2.868044 GCCATGTAGGATCGGATGTGAC 60.868 54.545 0.00 0.00 41.22 3.67
301 302 2.608016 CCATGTAGGATCGGATGTGACG 60.608 54.545 0.00 0.00 41.22 4.35
302 303 1.758936 TGTAGGATCGGATGTGACGT 58.241 50.000 0.00 0.00 0.00 4.34
303 304 2.921821 TGTAGGATCGGATGTGACGTA 58.078 47.619 0.00 0.00 0.00 3.57
304 305 3.281158 TGTAGGATCGGATGTGACGTAA 58.719 45.455 0.00 0.00 0.00 3.18
305 306 3.695556 TGTAGGATCGGATGTGACGTAAA 59.304 43.478 0.00 0.00 0.00 2.01
306 307 3.438297 AGGATCGGATGTGACGTAAAG 57.562 47.619 0.00 0.00 0.00 1.85
307 308 2.758979 AGGATCGGATGTGACGTAAAGT 59.241 45.455 0.00 0.00 0.00 2.66
308 309 3.949754 AGGATCGGATGTGACGTAAAGTA 59.050 43.478 0.00 0.00 0.00 2.24
309 310 4.036498 AGGATCGGATGTGACGTAAAGTAG 59.964 45.833 0.00 0.00 0.00 2.57
310 311 3.770263 TCGGATGTGACGTAAAGTAGG 57.230 47.619 0.00 0.00 0.00 3.18
311 312 3.084039 TCGGATGTGACGTAAAGTAGGT 58.916 45.455 0.00 0.00 0.00 3.08
312 313 3.507233 TCGGATGTGACGTAAAGTAGGTT 59.493 43.478 0.00 0.00 0.00 3.50
313 314 3.855950 CGGATGTGACGTAAAGTAGGTTC 59.144 47.826 0.00 0.00 0.00 3.62
314 315 3.855950 GGATGTGACGTAAAGTAGGTTCG 59.144 47.826 0.00 0.00 0.00 3.95
315 316 3.287312 TGTGACGTAAAGTAGGTTCGG 57.713 47.619 0.00 0.00 0.00 4.30
316 317 2.884012 TGTGACGTAAAGTAGGTTCGGA 59.116 45.455 0.00 0.00 0.00 4.55
317 318 3.507233 TGTGACGTAAAGTAGGTTCGGAT 59.493 43.478 0.00 0.00 0.00 4.18
318 319 4.699735 TGTGACGTAAAGTAGGTTCGGATA 59.300 41.667 0.00 0.00 0.00 2.59
319 320 5.163723 TGTGACGTAAAGTAGGTTCGGATAG 60.164 44.000 0.00 0.00 0.00 2.08
320 321 4.336433 TGACGTAAAGTAGGTTCGGATAGG 59.664 45.833 0.00 0.00 0.00 2.57
321 322 4.526970 ACGTAAAGTAGGTTCGGATAGGA 58.473 43.478 0.00 0.00 0.00 2.94
322 323 4.949856 ACGTAAAGTAGGTTCGGATAGGAA 59.050 41.667 0.00 0.00 0.00 3.36
323 324 5.418840 ACGTAAAGTAGGTTCGGATAGGAAA 59.581 40.000 0.00 0.00 0.00 3.13
324 325 6.071391 ACGTAAAGTAGGTTCGGATAGGAAAA 60.071 38.462 0.00 0.00 0.00 2.29
325 326 6.254373 CGTAAAGTAGGTTCGGATAGGAAAAC 59.746 42.308 0.00 0.00 0.00 2.43
326 327 5.750352 AAGTAGGTTCGGATAGGAAAACA 57.250 39.130 0.00 0.00 0.00 2.83
327 328 5.340439 AGTAGGTTCGGATAGGAAAACAG 57.660 43.478 0.00 0.00 0.00 3.16
328 329 3.629142 AGGTTCGGATAGGAAAACAGG 57.371 47.619 0.00 0.00 0.00 4.00
329 330 3.178865 AGGTTCGGATAGGAAAACAGGA 58.821 45.455 0.00 0.00 0.00 3.86
330 331 3.780850 AGGTTCGGATAGGAAAACAGGAT 59.219 43.478 0.00 0.00 0.00 3.24
331 332 4.127907 GGTTCGGATAGGAAAACAGGATC 58.872 47.826 0.00 0.00 0.00 3.36
332 333 4.127907 GTTCGGATAGGAAAACAGGATCC 58.872 47.826 2.48 2.48 35.88 3.36
334 335 3.641906 TCGGATAGGAAAACAGGATCCTC 59.358 47.826 12.69 0.00 42.44 3.71
335 336 3.643792 CGGATAGGAAAACAGGATCCTCT 59.356 47.826 12.69 7.50 42.44 3.69
336 337 4.262249 CGGATAGGAAAACAGGATCCTCTC 60.262 50.000 12.69 6.22 42.44 3.20
337 338 4.041075 GGATAGGAAAACAGGATCCTCTCC 59.959 50.000 12.69 15.00 45.96 3.71
349 350 4.135153 CTCTCCACGAGGCGGGTG 62.135 72.222 0.00 4.29 36.06 4.61
354 355 4.680237 CACGAGGCGGGTGCTTGA 62.680 66.667 0.00 0.00 42.25 3.02
355 356 3.936203 ACGAGGCGGGTGCTTGAA 61.936 61.111 0.00 0.00 42.25 2.69
356 357 3.121030 CGAGGCGGGTGCTTGAAG 61.121 66.667 0.00 0.00 42.25 3.02
357 358 2.347490 GAGGCGGGTGCTTGAAGA 59.653 61.111 0.00 0.00 42.25 2.87
358 359 1.743252 GAGGCGGGTGCTTGAAGAG 60.743 63.158 0.00 0.00 42.25 2.85
359 360 2.172483 GAGGCGGGTGCTTGAAGAGA 62.172 60.000 0.00 0.00 42.25 3.10
360 361 1.302511 GGCGGGTGCTTGAAGAGAA 60.303 57.895 0.00 0.00 42.25 2.87
361 362 0.889186 GGCGGGTGCTTGAAGAGAAA 60.889 55.000 0.00 0.00 42.25 2.52
362 363 0.951558 GCGGGTGCTTGAAGAGAAAA 59.048 50.000 0.00 0.00 38.39 2.29
363 364 1.336755 GCGGGTGCTTGAAGAGAAAAA 59.663 47.619 0.00 0.00 38.39 1.94
364 365 2.605580 GCGGGTGCTTGAAGAGAAAAAG 60.606 50.000 0.00 0.00 38.39 2.27
365 366 2.618709 CGGGTGCTTGAAGAGAAAAAGT 59.381 45.455 0.00 0.00 0.00 2.66
366 367 3.548818 CGGGTGCTTGAAGAGAAAAAGTG 60.549 47.826 0.00 0.00 0.00 3.16
367 368 3.381590 GGGTGCTTGAAGAGAAAAAGTGT 59.618 43.478 0.00 0.00 0.00 3.55
368 369 4.354587 GGTGCTTGAAGAGAAAAAGTGTG 58.645 43.478 0.00 0.00 0.00 3.82
369 370 4.354587 GTGCTTGAAGAGAAAAAGTGTGG 58.645 43.478 0.00 0.00 0.00 4.17
370 371 4.016444 TGCTTGAAGAGAAAAAGTGTGGT 58.984 39.130 0.00 0.00 0.00 4.16
371 372 4.096382 TGCTTGAAGAGAAAAAGTGTGGTC 59.904 41.667 0.00 0.00 0.00 4.02
372 373 4.498177 GCTTGAAGAGAAAAAGTGTGGTCC 60.498 45.833 0.00 0.00 0.00 4.46
373 374 3.202906 TGAAGAGAAAAAGTGTGGTCCG 58.797 45.455 0.00 0.00 0.00 4.79
374 375 3.118555 TGAAGAGAAAAAGTGTGGTCCGA 60.119 43.478 0.00 0.00 0.00 4.55
375 376 3.771577 AGAGAAAAAGTGTGGTCCGAT 57.228 42.857 0.00 0.00 0.00 4.18
376 377 3.403038 AGAGAAAAAGTGTGGTCCGATG 58.597 45.455 0.00 0.00 0.00 3.84
377 378 3.071023 AGAGAAAAAGTGTGGTCCGATGA 59.929 43.478 0.00 0.00 0.00 2.92
378 379 3.139077 AGAAAAAGTGTGGTCCGATGAC 58.861 45.455 0.00 0.00 40.98 3.06
379 380 2.631160 AAAAGTGTGGTCCGATGACA 57.369 45.000 0.00 0.00 43.65 3.58
380 381 2.631160 AAAGTGTGGTCCGATGACAA 57.369 45.000 0.00 0.00 43.65 3.18
381 382 2.631160 AAGTGTGGTCCGATGACAAA 57.369 45.000 0.00 0.00 43.65 2.83
382 383 2.631160 AGTGTGGTCCGATGACAAAA 57.369 45.000 0.00 0.00 43.65 2.44
383 384 2.494059 AGTGTGGTCCGATGACAAAAG 58.506 47.619 0.00 0.00 43.65 2.27
384 385 1.069227 GTGTGGTCCGATGACAAAAGC 60.069 52.381 0.00 0.00 43.65 3.51
385 386 1.202758 TGTGGTCCGATGACAAAAGCT 60.203 47.619 0.00 0.00 43.65 3.74
386 387 1.197721 GTGGTCCGATGACAAAAGCTG 59.802 52.381 0.00 0.00 43.65 4.24
387 388 1.071542 TGGTCCGATGACAAAAGCTGA 59.928 47.619 0.00 0.00 43.65 4.26
388 389 2.151202 GGTCCGATGACAAAAGCTGAA 58.849 47.619 0.00 0.00 43.65 3.02
389 390 2.552315 GGTCCGATGACAAAAGCTGAAA 59.448 45.455 0.00 0.00 43.65 2.69
390 391 3.004315 GGTCCGATGACAAAAGCTGAAAA 59.996 43.478 0.00 0.00 43.65 2.29
391 392 4.222114 GTCCGATGACAAAAGCTGAAAAG 58.778 43.478 0.00 0.00 41.37 2.27
392 393 3.253188 TCCGATGACAAAAGCTGAAAAGG 59.747 43.478 0.00 0.00 0.00 3.11
393 394 3.004734 CCGATGACAAAAGCTGAAAAGGT 59.995 43.478 0.00 0.00 0.00 3.50
394 395 4.499696 CCGATGACAAAAGCTGAAAAGGTT 60.500 41.667 0.00 0.00 0.00 3.50
395 396 4.442073 CGATGACAAAAGCTGAAAAGGTTG 59.558 41.667 0.00 0.00 0.00 3.77
396 397 4.122143 TGACAAAAGCTGAAAAGGTTGG 57.878 40.909 0.00 0.00 0.00 3.77
397 398 3.766591 TGACAAAAGCTGAAAAGGTTGGA 59.233 39.130 0.00 0.00 0.00 3.53
398 399 4.142182 TGACAAAAGCTGAAAAGGTTGGAG 60.142 41.667 0.00 0.00 0.00 3.86
399 400 3.769300 ACAAAAGCTGAAAAGGTTGGAGT 59.231 39.130 0.00 0.00 0.00 3.85
400 401 4.114794 CAAAAGCTGAAAAGGTTGGAGTG 58.885 43.478 0.00 0.00 0.00 3.51
401 402 3.297134 AAGCTGAAAAGGTTGGAGTGA 57.703 42.857 0.00 0.00 0.00 3.41
402 403 3.297134 AGCTGAAAAGGTTGGAGTGAA 57.703 42.857 0.00 0.00 0.00 3.18
403 404 3.631250 AGCTGAAAAGGTTGGAGTGAAA 58.369 40.909 0.00 0.00 0.00 2.69
404 405 4.023291 AGCTGAAAAGGTTGGAGTGAAAA 58.977 39.130 0.00 0.00 0.00 2.29
405 406 4.098501 AGCTGAAAAGGTTGGAGTGAAAAG 59.901 41.667 0.00 0.00 0.00 2.27
406 407 4.142160 GCTGAAAAGGTTGGAGTGAAAAGT 60.142 41.667 0.00 0.00 0.00 2.66
407 408 5.323371 TGAAAAGGTTGGAGTGAAAAGTG 57.677 39.130 0.00 0.00 0.00 3.16
408 409 5.013547 TGAAAAGGTTGGAGTGAAAAGTGA 58.986 37.500 0.00 0.00 0.00 3.41
409 410 5.478679 TGAAAAGGTTGGAGTGAAAAGTGAA 59.521 36.000 0.00 0.00 0.00 3.18
410 411 5.582689 AAAGGTTGGAGTGAAAAGTGAAG 57.417 39.130 0.00 0.00 0.00 3.02
411 412 4.503714 AGGTTGGAGTGAAAAGTGAAGA 57.496 40.909 0.00 0.00 0.00 2.87
412 413 5.053978 AGGTTGGAGTGAAAAGTGAAGAT 57.946 39.130 0.00 0.00 0.00 2.40
413 414 4.823989 AGGTTGGAGTGAAAAGTGAAGATG 59.176 41.667 0.00 0.00 0.00 2.90
414 415 4.540824 GTTGGAGTGAAAAGTGAAGATGC 58.459 43.478 0.00 0.00 0.00 3.91
415 416 3.819368 TGGAGTGAAAAGTGAAGATGCA 58.181 40.909 0.00 0.00 0.00 3.96
416 417 4.401022 TGGAGTGAAAAGTGAAGATGCAT 58.599 39.130 0.00 0.00 0.00 3.96
417 418 4.216902 TGGAGTGAAAAGTGAAGATGCATG 59.783 41.667 2.46 0.00 0.00 4.06
418 419 4.217118 GGAGTGAAAAGTGAAGATGCATGT 59.783 41.667 2.46 0.00 0.00 3.21
419 420 5.117355 AGTGAAAAGTGAAGATGCATGTG 57.883 39.130 2.46 0.00 0.00 3.21
420 421 4.581824 AGTGAAAAGTGAAGATGCATGTGT 59.418 37.500 2.46 0.00 0.00 3.72
421 422 5.764686 AGTGAAAAGTGAAGATGCATGTGTA 59.235 36.000 2.46 0.00 0.00 2.90
422 423 5.853282 GTGAAAAGTGAAGATGCATGTGTAC 59.147 40.000 2.46 3.07 0.00 2.90
423 424 5.764686 TGAAAAGTGAAGATGCATGTGTACT 59.235 36.000 2.46 5.64 0.00 2.73
424 425 6.934083 TGAAAAGTGAAGATGCATGTGTACTA 59.066 34.615 2.46 0.00 0.00 1.82
425 426 6.974932 AAAGTGAAGATGCATGTGTACTAG 57.025 37.500 2.46 0.00 0.00 2.57
426 427 5.921962 AGTGAAGATGCATGTGTACTAGA 57.078 39.130 2.46 0.00 0.00 2.43
427 428 5.900425 AGTGAAGATGCATGTGTACTAGAG 58.100 41.667 2.46 0.00 0.00 2.43
428 429 5.420421 AGTGAAGATGCATGTGTACTAGAGT 59.580 40.000 2.46 0.00 0.00 3.24
429 430 6.071108 AGTGAAGATGCATGTGTACTAGAGTT 60.071 38.462 2.46 0.00 0.00 3.01
430 431 6.591834 GTGAAGATGCATGTGTACTAGAGTTT 59.408 38.462 2.46 0.00 0.00 2.66
431 432 7.118390 GTGAAGATGCATGTGTACTAGAGTTTT 59.882 37.037 2.46 0.00 0.00 2.43
432 433 7.661437 TGAAGATGCATGTGTACTAGAGTTTTT 59.339 33.333 2.46 0.00 0.00 1.94
433 434 9.151471 GAAGATGCATGTGTACTAGAGTTTTTA 57.849 33.333 2.46 0.00 0.00 1.52
434 435 9.672673 AAGATGCATGTGTACTAGAGTTTTTAT 57.327 29.630 2.46 0.00 0.00 1.40
435 436 9.672673 AGATGCATGTGTACTAGAGTTTTTATT 57.327 29.630 2.46 0.00 0.00 1.40
459 460 7.790782 TTTTTATTTCTTAATGAGGCCCACT 57.209 32.000 0.00 0.00 0.00 4.00
460 461 8.887264 TTTTTATTTCTTAATGAGGCCCACTA 57.113 30.769 0.00 0.00 0.00 2.74
461 462 8.887264 TTTTATTTCTTAATGAGGCCCACTAA 57.113 30.769 0.00 0.00 0.00 2.24
462 463 9.487442 TTTTATTTCTTAATGAGGCCCACTAAT 57.513 29.630 0.00 0.00 0.00 1.73
463 464 6.966534 ATTTCTTAATGAGGCCCACTAATG 57.033 37.500 0.00 0.00 0.00 1.90
464 465 5.708736 TTCTTAATGAGGCCCACTAATGA 57.291 39.130 0.00 0.00 0.00 2.57
465 466 5.912149 TCTTAATGAGGCCCACTAATGAT 57.088 39.130 0.00 0.00 0.00 2.45
466 467 7.387265 TTCTTAATGAGGCCCACTAATGATA 57.613 36.000 0.00 0.00 0.00 2.15
467 468 7.009179 TCTTAATGAGGCCCACTAATGATAG 57.991 40.000 0.00 0.00 35.14 2.08
468 469 3.710209 ATGAGGCCCACTAATGATAGC 57.290 47.619 0.00 0.00 31.96 2.97
469 470 2.694397 TGAGGCCCACTAATGATAGCT 58.306 47.619 0.00 0.00 31.96 3.32
470 471 3.048600 TGAGGCCCACTAATGATAGCTT 58.951 45.455 0.00 0.00 31.96 3.74
471 472 3.181451 TGAGGCCCACTAATGATAGCTTG 60.181 47.826 0.00 0.00 31.96 4.01
472 473 1.882623 GGCCCACTAATGATAGCTTGC 59.117 52.381 0.00 0.00 31.96 4.01
473 474 2.575532 GCCCACTAATGATAGCTTGCA 58.424 47.619 0.00 0.00 31.96 4.08
474 475 3.152341 GCCCACTAATGATAGCTTGCAT 58.848 45.455 0.00 0.00 31.96 3.96
475 476 3.571401 GCCCACTAATGATAGCTTGCATT 59.429 43.478 15.30 15.30 38.24 3.56
476 477 4.558095 GCCCACTAATGATAGCTTGCATTG 60.558 45.833 18.58 12.80 36.27 2.82
477 478 4.022589 CCCACTAATGATAGCTTGCATTGG 60.023 45.833 18.58 17.90 38.47 3.16
478 479 4.823442 CCACTAATGATAGCTTGCATTGGA 59.177 41.667 22.46 7.26 36.73 3.53
479 480 5.048921 CCACTAATGATAGCTTGCATTGGAG 60.049 44.000 22.46 17.03 36.73 3.86
480 481 5.761726 CACTAATGATAGCTTGCATTGGAGA 59.238 40.000 22.46 6.48 36.73 3.71
481 482 5.996513 ACTAATGATAGCTTGCATTGGAGAG 59.003 40.000 22.46 14.62 36.73 3.20
482 483 3.204306 TGATAGCTTGCATTGGAGAGG 57.796 47.619 0.00 0.00 0.00 3.69
483 484 2.773661 TGATAGCTTGCATTGGAGAGGA 59.226 45.455 0.00 0.00 0.00 3.71
484 485 3.200605 TGATAGCTTGCATTGGAGAGGAA 59.799 43.478 0.00 0.00 0.00 3.36
485 486 2.592102 AGCTTGCATTGGAGAGGAAA 57.408 45.000 0.00 0.00 0.00 3.13
486 487 2.880443 AGCTTGCATTGGAGAGGAAAA 58.120 42.857 0.00 0.00 0.00 2.29
487 488 3.233507 AGCTTGCATTGGAGAGGAAAAA 58.766 40.909 0.00 0.00 0.00 1.94
488 489 3.836562 AGCTTGCATTGGAGAGGAAAAAT 59.163 39.130 0.00 0.00 0.00 1.82
489 490 4.285260 AGCTTGCATTGGAGAGGAAAAATT 59.715 37.500 0.00 0.00 0.00 1.82
490 491 5.481473 AGCTTGCATTGGAGAGGAAAAATTA 59.519 36.000 0.00 0.00 0.00 1.40
491 492 6.014327 AGCTTGCATTGGAGAGGAAAAATTAA 60.014 34.615 0.00 0.00 0.00 1.40
492 493 6.820152 GCTTGCATTGGAGAGGAAAAATTAAT 59.180 34.615 0.00 0.00 0.00 1.40
493 494 7.201582 GCTTGCATTGGAGAGGAAAAATTAATG 60.202 37.037 0.00 0.00 0.00 1.90
494 495 7.243604 TGCATTGGAGAGGAAAAATTAATGT 57.756 32.000 0.00 0.00 0.00 2.71
495 496 8.359875 TGCATTGGAGAGGAAAAATTAATGTA 57.640 30.769 0.00 0.00 0.00 2.29
496 497 8.469200 TGCATTGGAGAGGAAAAATTAATGTAG 58.531 33.333 0.00 0.00 0.00 2.74
497 498 7.922811 GCATTGGAGAGGAAAAATTAATGTAGG 59.077 37.037 0.00 0.00 0.00 3.18
498 499 8.971073 CATTGGAGAGGAAAAATTAATGTAGGT 58.029 33.333 0.00 0.00 0.00 3.08
499 500 7.938140 TGGAGAGGAAAAATTAATGTAGGTG 57.062 36.000 0.00 0.00 0.00 4.00
500 501 6.377146 TGGAGAGGAAAAATTAATGTAGGTGC 59.623 38.462 0.00 0.00 0.00 5.01
501 502 6.603599 GGAGAGGAAAAATTAATGTAGGTGCT 59.396 38.462 0.00 0.00 0.00 4.40
502 503 7.122799 GGAGAGGAAAAATTAATGTAGGTGCTT 59.877 37.037 0.00 0.00 0.00 3.91
503 504 8.422577 AGAGGAAAAATTAATGTAGGTGCTTT 57.577 30.769 0.00 0.00 0.00 3.51
504 505 9.528489 AGAGGAAAAATTAATGTAGGTGCTTTA 57.472 29.630 0.00 0.00 0.00 1.85
548 549 2.512692 TGTATCCATATGCCATGCCC 57.487 50.000 0.00 0.00 0.00 5.36
549 550 1.994794 TGTATCCATATGCCATGCCCT 59.005 47.619 0.00 0.00 0.00 5.19
550 551 3.188773 TGTATCCATATGCCATGCCCTA 58.811 45.455 0.00 0.00 0.00 3.53
551 552 3.591079 TGTATCCATATGCCATGCCCTAA 59.409 43.478 0.00 0.00 0.00 2.69
552 553 4.230272 TGTATCCATATGCCATGCCCTAAT 59.770 41.667 0.00 0.00 0.00 1.73
553 554 3.831642 TCCATATGCCATGCCCTAATT 57.168 42.857 0.00 0.00 0.00 1.40
554 555 3.700538 TCCATATGCCATGCCCTAATTC 58.299 45.455 0.00 0.00 0.00 2.17
555 556 3.334581 TCCATATGCCATGCCCTAATTCT 59.665 43.478 0.00 0.00 0.00 2.40
556 557 3.698040 CCATATGCCATGCCCTAATTCTC 59.302 47.826 0.00 0.00 0.00 2.87
557 558 1.901591 ATGCCATGCCCTAATTCTCG 58.098 50.000 0.00 0.00 0.00 4.04
558 559 0.836606 TGCCATGCCCTAATTCTCGA 59.163 50.000 0.00 0.00 0.00 4.04
559 560 1.202687 TGCCATGCCCTAATTCTCGAG 60.203 52.381 5.93 5.93 0.00 4.04
560 561 1.879796 GCCATGCCCTAATTCTCGAGG 60.880 57.143 13.56 0.00 0.00 4.63
561 562 1.694150 CCATGCCCTAATTCTCGAGGA 59.306 52.381 13.56 3.44 34.46 3.71
562 563 2.289320 CCATGCCCTAATTCTCGAGGAG 60.289 54.545 13.56 5.19 34.46 3.69
563 564 2.160721 TGCCCTAATTCTCGAGGAGT 57.839 50.000 13.56 5.57 34.46 3.85
564 565 2.467880 TGCCCTAATTCTCGAGGAGTT 58.532 47.619 13.56 7.75 34.46 3.01
565 566 2.838202 TGCCCTAATTCTCGAGGAGTTT 59.162 45.455 13.56 0.00 34.46 2.66
566 567 3.263425 TGCCCTAATTCTCGAGGAGTTTT 59.737 43.478 13.56 0.00 34.46 2.43
567 568 4.262617 GCCCTAATTCTCGAGGAGTTTTT 58.737 43.478 13.56 0.00 34.46 1.94
582 583 3.821841 AGTTTTTGAATCACGCGGAATC 58.178 40.909 12.47 8.35 0.00 2.52
587 588 0.040958 GAATCACGCGGAATCCATGC 60.041 55.000 12.47 0.00 0.00 4.06
591 592 2.586079 CGCGGAATCCATGCGTCT 60.586 61.111 12.37 0.00 45.70 4.18
592 593 2.589492 CGCGGAATCCATGCGTCTC 61.589 63.158 12.37 0.00 45.70 3.36
593 594 1.227380 GCGGAATCCATGCGTCTCT 60.227 57.895 0.00 0.00 45.70 3.10
594 595 1.493950 GCGGAATCCATGCGTCTCTG 61.494 60.000 0.00 0.00 45.70 3.35
595 596 0.179100 CGGAATCCATGCGTCTCTGT 60.179 55.000 0.00 0.00 38.18 3.41
597 598 1.667724 GGAATCCATGCGTCTCTGTTG 59.332 52.381 0.00 0.00 0.00 3.33
598 599 1.063174 GAATCCATGCGTCTCTGTTGC 59.937 52.381 0.00 0.00 0.00 4.17
806 812 3.982241 GGCAAGGCAAAGCGCAGT 61.982 61.111 11.47 0.00 45.17 4.40
810 816 4.586235 AGGCAAAGCGCAGTGGGT 62.586 61.111 11.47 0.00 45.17 4.51
823 829 4.028490 TGGGTCCCACCACATCGC 62.028 66.667 6.47 0.00 41.02 4.58
974 996 2.910479 ACGCAGACGGTCCAGACA 60.910 61.111 4.14 0.00 46.04 3.41
986 1008 2.574018 CCAGACACCAGACGCCAGA 61.574 63.158 0.00 0.00 0.00 3.86
987 1009 1.080230 CAGACACCAGACGCCAGAG 60.080 63.158 0.00 0.00 0.00 3.35
988 1010 1.228583 AGACACCAGACGCCAGAGA 60.229 57.895 0.00 0.00 0.00 3.10
989 1011 1.214062 GACACCAGACGCCAGAGAG 59.786 63.158 0.00 0.00 0.00 3.20
990 1012 1.228583 ACACCAGACGCCAGAGAGA 60.229 57.895 0.00 0.00 0.00 3.10
998 1023 2.183046 GCCAGAGAGACAGACGCC 59.817 66.667 0.00 0.00 0.00 5.68
1265 1290 2.670148 CCACCTTCCCTTCCTCCCG 61.670 68.421 0.00 0.00 0.00 5.14
1269 1314 1.489560 CCTTCCCTTCCTCCCGTGTT 61.490 60.000 0.00 0.00 0.00 3.32
1292 1337 2.947652 CCATTGCCTGATCGATCTGTTT 59.052 45.455 25.02 7.20 0.00 2.83
1335 1380 2.358737 GTTCGGTGGAGCCAGTGG 60.359 66.667 4.20 4.20 36.97 4.00
1336 1381 2.847234 TTCGGTGGAGCCAGTGGT 60.847 61.111 11.74 0.00 36.97 4.16
1340 1385 2.221299 GGTGGAGCCAGTGGTACCA 61.221 63.158 20.22 20.22 37.17 3.25
1341 1386 1.003718 GTGGAGCCAGTGGTACCAC 60.004 63.158 33.72 33.72 46.50 4.16
1360 1405 6.724893 ACCACCTTTTGTTAGCTTTTGTAT 57.275 33.333 0.00 0.00 0.00 2.29
1361 1406 7.826918 ACCACCTTTTGTTAGCTTTTGTATA 57.173 32.000 0.00 0.00 0.00 1.47
1363 1408 8.139350 ACCACCTTTTGTTAGCTTTTGTATAAC 58.861 33.333 0.00 0.00 0.00 1.89
1364 1409 8.357402 CCACCTTTTGTTAGCTTTTGTATAACT 58.643 33.333 0.00 0.00 31.99 2.24
1365 1410 9.394477 CACCTTTTGTTAGCTTTTGTATAACTC 57.606 33.333 0.00 0.00 31.99 3.01
1523 1568 3.522750 AGGAGCTGATGATCAAAGAAGGT 59.477 43.478 11.86 7.19 0.00 3.50
1577 1622 5.601313 GGTAATAACACTGGGATCACCTCTA 59.399 44.000 0.00 0.00 41.11 2.43
1609 1654 8.948853 ACATATTTGTTGTCACTAAATTGTCG 57.051 30.769 0.00 0.00 29.55 4.35
1729 1774 4.141251 ACCTTACCACATCAACTCCAGTTT 60.141 41.667 0.00 0.00 35.83 2.66
1738 1784 3.138304 TCAACTCCAGTTTGATGTTCCG 58.862 45.455 0.00 0.00 35.83 4.30
1739 1785 2.185004 ACTCCAGTTTGATGTTCCGG 57.815 50.000 0.00 0.00 0.00 5.14
1762 1808 7.150783 GGTAGTAGTTCTTCCGAAGTTAGAA 57.849 40.000 8.01 0.00 34.69 2.10
1778 1824 6.630444 AGTTAGAATATGCTGAATTGCTGG 57.370 37.500 0.00 0.00 0.00 4.85
1804 1850 2.160417 GCTGCAACGTTCTTTAGCTCAT 59.840 45.455 0.00 0.00 0.00 2.90
1805 1851 3.365364 GCTGCAACGTTCTTTAGCTCATT 60.365 43.478 0.00 0.00 0.00 2.57
1897 1943 2.032681 GCCAAGTTCCGCTCACCT 59.967 61.111 0.00 0.00 0.00 4.00
1951 1997 2.558359 CAAAATCCCCTCGCTTCACTTT 59.442 45.455 0.00 0.00 0.00 2.66
1954 2000 1.056660 TCCCCTCGCTTCACTTTCTT 58.943 50.000 0.00 0.00 0.00 2.52
2072 2121 1.153726 CGGTGTGTGCGTATGGCTA 60.154 57.895 0.00 0.00 44.05 3.93
2264 2315 8.106348 CGATAGTACTATTGAAAAACGTCCAAC 58.894 37.037 21.38 1.62 0.00 3.77
2354 2405 8.657712 CATACCATAGGATCATCCATGACATAT 58.342 37.037 6.42 4.70 39.61 1.78
2440 2498 8.791749 CCATTTCTAGGGGTATATTATTCCCAT 58.208 37.037 17.40 13.81 41.33 4.00
2547 2605 4.341235 ACTGAGTAGTGAGCAAGTAACACA 59.659 41.667 0.00 0.00 35.34 3.72
2550 2608 2.550830 AGTGAGCAAGTAACACAGGG 57.449 50.000 0.00 0.00 37.05 4.45
2646 2704 5.826737 AGAGTCATTTGTGGATCCATTCATC 59.173 40.000 19.62 4.90 0.00 2.92
2705 2763 5.116180 TGTTGGTAAGCTCTCATATTTCCG 58.884 41.667 0.00 0.00 0.00 4.30
2720 2779 1.900245 TTCCGTTTACCAAAGCTCCC 58.100 50.000 0.00 0.00 0.00 4.30
2726 2785 3.431415 GTTTACCAAAGCTCCCCTGAAT 58.569 45.455 0.00 0.00 0.00 2.57
2727 2786 3.825908 TTACCAAAGCTCCCCTGAATT 57.174 42.857 0.00 0.00 0.00 2.17
2810 2871 7.963532 AGTTCAAAGAGATCAGTAGGTAAACA 58.036 34.615 0.00 0.00 0.00 2.83
2842 2903 5.070823 AGATATTTGTGATTGGAGGCCAT 57.929 39.130 5.01 0.00 31.53 4.40
2873 2934 7.923878 TCACAAACTTTAGCTGGAAAATAAACC 59.076 33.333 0.00 0.00 0.00 3.27
2876 2937 6.496338 ACTTTAGCTGGAAAATAAACCTCG 57.504 37.500 0.00 0.00 0.00 4.63
2881 2942 5.123936 AGCTGGAAAATAAACCTCGGTATC 58.876 41.667 0.00 0.00 0.00 2.24
2890 2951 4.460948 AAACCTCGGTATCGCTCTTTTA 57.539 40.909 0.00 0.00 36.13 1.52
2925 3173 5.864474 GGGTTCGATATCTGTACATGCTAAG 59.136 44.000 0.00 0.00 0.00 2.18
2957 3205 6.375455 TCTTGATGGAAGAACTTCAAATAGCC 59.625 38.462 15.02 0.00 41.20 3.93
2959 3207 4.380843 TGGAAGAACTTCAAATAGCCCA 57.619 40.909 15.02 1.14 41.20 5.36
2960 3208 4.735369 TGGAAGAACTTCAAATAGCCCAA 58.265 39.130 15.02 0.00 41.20 4.12
2963 3211 5.476945 GGAAGAACTTCAAATAGCCCAAAGA 59.523 40.000 15.02 0.00 41.20 2.52
2970 3218 6.323739 ACTTCAAATAGCCCAAAGAGTTCAAA 59.676 34.615 0.00 0.00 0.00 2.69
2981 3229 5.468746 CCAAAGAGTTCAAACGACCTATCAA 59.531 40.000 0.00 0.00 0.00 2.57
2992 3240 5.880054 ACGACCTATCAATTTCTTGGTTG 57.120 39.130 0.00 0.00 35.65 3.77
3007 3255 0.734889 GGTTGACCATTCTGCATCGG 59.265 55.000 0.00 0.00 35.64 4.18
3016 3264 2.665649 TTCTGCATCGGTATGAACGT 57.334 45.000 0.00 0.00 34.84 3.99
3115 3365 5.125097 CCTTGACAAGATGGAAAAGGAGATG 59.875 44.000 16.99 0.00 37.02 2.90
3133 3383 3.261897 AGATGTCTGAACTTCCATCCGTT 59.738 43.478 0.00 0.00 35.42 4.44
3325 3755 8.803397 ATAATGATAGCTATCGTACCACTACA 57.197 34.615 25.24 7.72 35.48 2.74
3327 3757 5.618236 TGATAGCTATCGTACCACTACACT 58.382 41.667 25.00 0.00 35.48 3.55
3343 3773 6.406370 CACTACACTTTCACATCCTATGGAA 58.594 40.000 0.00 0.00 34.34 3.53
3346 3776 5.880901 ACACTTTCACATCCTATGGAACTT 58.119 37.500 0.00 0.00 34.34 2.66
3437 4512 5.710984 ACAGAAGTACAAGATCCGTGTAAG 58.289 41.667 8.12 1.55 33.40 2.34
3475 4550 5.127031 AGCTAAGCTAAGGAAGAGAGAACAG 59.873 44.000 0.00 0.00 36.99 3.16
3477 4552 6.095720 GCTAAGCTAAGGAAGAGAGAACAGTA 59.904 42.308 0.00 0.00 0.00 2.74
3478 4553 6.524101 AAGCTAAGGAAGAGAGAACAGTAG 57.476 41.667 0.00 0.00 0.00 2.57
3479 4554 5.822204 AGCTAAGGAAGAGAGAACAGTAGA 58.178 41.667 0.00 0.00 0.00 2.59
3480 4555 6.249951 AGCTAAGGAAGAGAGAACAGTAGAA 58.750 40.000 0.00 0.00 0.00 2.10
3481 4556 6.152154 AGCTAAGGAAGAGAGAACAGTAGAAC 59.848 42.308 0.00 0.00 0.00 3.01
3484 4559 5.390387 AGGAAGAGAGAACAGTAGAACACT 58.610 41.667 0.00 0.00 38.32 3.55
3494 4569 3.838244 AGTAGAACACTGTGCTTTCCA 57.162 42.857 7.90 0.00 35.62 3.53
3495 4570 4.150897 AGTAGAACACTGTGCTTTCCAA 57.849 40.909 7.90 0.00 35.62 3.53
3497 4572 3.281727 AGAACACTGTGCTTTCCAAGA 57.718 42.857 7.90 0.00 0.00 3.02
3499 4574 4.016444 AGAACACTGTGCTTTCCAAGAAA 58.984 39.130 7.90 0.00 0.00 2.52
3501 4576 3.620488 ACACTGTGCTTTCCAAGAAAGA 58.380 40.909 18.75 3.89 0.00 2.52
3502 4577 4.016444 ACACTGTGCTTTCCAAGAAAGAA 58.984 39.130 18.75 7.40 0.00 2.52
3511 4770 6.942005 TGCTTTCCAAGAAAGAACATCTCATA 59.058 34.615 18.75 0.00 0.00 2.15
3538 4798 6.434018 TTTCCAAGCCAAACAAAAATTGAG 57.566 33.333 0.00 0.00 0.00 3.02
3564 4824 2.442236 AATCACCCGATTGGCAGAAT 57.558 45.000 0.00 0.00 40.45 2.40
3642 4907 1.986575 GCAGCAGCGATCCAAACTCC 61.987 60.000 0.00 0.00 0.00 3.85
3645 4910 0.674895 GCAGCGATCCAAACTCCAGT 60.675 55.000 0.00 0.00 0.00 4.00
3703 4968 0.516877 CTTCAATTCGGCGAGCAACA 59.483 50.000 10.46 0.00 0.00 3.33
3821 5086 0.535797 GGGACCTTGGAACTAGACGG 59.464 60.000 0.00 0.00 0.00 4.79
3911 5187 4.767255 GAGGCAGGTGGCGGACAG 62.767 72.222 0.00 0.00 46.16 3.51
4055 5331 4.821589 CGAGGTCAGCCCGGCTTC 62.822 72.222 9.99 3.76 36.40 3.86
4059 5335 2.044946 GTCAGCCCGGCTTCCATT 60.045 61.111 9.99 0.00 36.40 3.16
4060 5336 1.223487 GTCAGCCCGGCTTCCATTA 59.777 57.895 9.99 0.00 36.40 1.90
4061 5337 1.095807 GTCAGCCCGGCTTCCATTAC 61.096 60.000 9.99 0.00 36.40 1.89
4063 5339 1.097547 CAGCCCGGCTTCCATTACAG 61.098 60.000 9.99 0.00 36.40 2.74
4064 5340 1.077716 GCCCGGCTTCCATTACAGT 60.078 57.895 0.71 0.00 0.00 3.55
4065 5341 0.179468 GCCCGGCTTCCATTACAGTA 59.821 55.000 0.71 0.00 0.00 2.74
4076 5352 6.938698 TTCCATTACAGTAACCAGGAAGTA 57.061 37.500 15.07 0.81 0.00 2.24
4080 5356 7.123247 TCCATTACAGTAACCAGGAAGTACTAC 59.877 40.741 0.00 0.00 0.00 2.73
4081 5357 7.093640 CCATTACAGTAACCAGGAAGTACTACA 60.094 40.741 0.00 0.00 0.00 2.74
4100 5378 6.281405 ACTACAGTAGTTGACTTTCCAGTTG 58.719 40.000 7.48 0.00 35.64 3.16
4154 5439 1.681793 TCGATCTCGGGACAGGATTTC 59.318 52.381 0.00 0.00 40.29 2.17
4155 5440 1.269831 CGATCTCGGGACAGGATTTCC 60.270 57.143 0.00 0.00 35.37 3.13
4157 5442 1.486211 TCTCGGGACAGGATTTCCTC 58.514 55.000 0.00 0.00 46.65 3.71
4180 5465 1.984297 GTACAAGAACTTCGGCGAGTC 59.016 52.381 10.46 9.38 0.00 3.36
4182 5467 1.014564 CAAGAACTTCGGCGAGTCCC 61.015 60.000 10.46 6.70 0.00 4.46
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 8.172484 CGAAGAAATAACATTTATGGTGTTCGA 58.828 33.333 12.27 0.00 40.13 3.71
1 2 7.044966 GCGAAGAAATAACATTTATGGTGTTCG 60.045 37.037 12.82 12.82 40.13 3.95
2 3 7.044966 CGCGAAGAAATAACATTTATGGTGTTC 60.045 37.037 0.00 0.00 40.13 3.18
3 4 6.745450 CGCGAAGAAATAACATTTATGGTGTT 59.255 34.615 0.00 0.00 42.12 3.32
4 5 6.092944 TCGCGAAGAAATAACATTTATGGTGT 59.907 34.615 6.20 0.00 0.00 4.16
6 7 6.671614 TCGCGAAGAAATAACATTTATGGT 57.328 33.333 6.20 0.00 0.00 3.55
7 8 7.962934 TTTCGCGAAGAAATAACATTTATGG 57.037 32.000 22.21 0.00 43.35 2.74
19 20 1.595794 GTGTGAGGTTTCGCGAAGAAA 59.404 47.619 22.21 4.39 45.76 2.52
20 21 1.214367 GTGTGAGGTTTCGCGAAGAA 58.786 50.000 22.21 5.24 36.61 2.52
21 22 0.937699 CGTGTGAGGTTTCGCGAAGA 60.938 55.000 22.21 10.42 39.45 2.87
22 23 1.213094 ACGTGTGAGGTTTCGCGAAG 61.213 55.000 22.21 9.42 40.15 3.79
23 24 1.227031 ACGTGTGAGGTTTCGCGAA 60.227 52.632 19.38 19.38 40.15 4.70
24 25 1.947146 CACGTGTGAGGTTTCGCGA 60.947 57.895 3.71 3.71 40.15 5.87
25 26 2.544359 CACGTGTGAGGTTTCGCG 59.456 61.111 7.58 0.00 42.16 5.87
26 27 2.604174 CCCACGTGTGAGGTTTCGC 61.604 63.158 15.65 0.00 0.00 4.70
27 28 0.320421 ATCCCACGTGTGAGGTTTCG 60.320 55.000 15.65 0.00 0.00 3.46
28 29 2.232941 TCTATCCCACGTGTGAGGTTTC 59.767 50.000 15.65 0.00 0.00 2.78
29 30 2.253610 TCTATCCCACGTGTGAGGTTT 58.746 47.619 15.65 4.16 0.00 3.27
30 31 1.933021 TCTATCCCACGTGTGAGGTT 58.067 50.000 15.65 6.48 0.00 3.50
31 32 1.549170 GTTCTATCCCACGTGTGAGGT 59.451 52.381 15.65 1.46 0.00 3.85
32 33 1.548719 TGTTCTATCCCACGTGTGAGG 59.451 52.381 15.65 8.95 0.00 3.86
33 34 2.231478 AGTGTTCTATCCCACGTGTGAG 59.769 50.000 15.65 5.90 36.69 3.51
34 35 2.230508 GAGTGTTCTATCCCACGTGTGA 59.769 50.000 15.65 9.38 36.69 3.58
35 36 2.607187 GAGTGTTCTATCCCACGTGTG 58.393 52.381 15.65 2.45 36.69 3.82
36 37 1.201647 CGAGTGTTCTATCCCACGTGT 59.798 52.381 15.65 0.00 36.69 4.49
37 38 1.469251 CCGAGTGTTCTATCCCACGTG 60.469 57.143 9.08 9.08 36.69 4.49
38 39 0.815734 CCGAGTGTTCTATCCCACGT 59.184 55.000 0.00 0.00 36.69 4.49
39 40 0.815734 ACCGAGTGTTCTATCCCACG 59.184 55.000 0.00 0.00 36.69 4.94
40 41 1.202268 CGACCGAGTGTTCTATCCCAC 60.202 57.143 0.00 0.00 0.00 4.61
41 42 1.100510 CGACCGAGTGTTCTATCCCA 58.899 55.000 0.00 0.00 0.00 4.37
42 43 0.248949 GCGACCGAGTGTTCTATCCC 60.249 60.000 0.00 0.00 0.00 3.85
43 44 0.454600 TGCGACCGAGTGTTCTATCC 59.545 55.000 0.00 0.00 0.00 2.59
44 45 2.493713 ATGCGACCGAGTGTTCTATC 57.506 50.000 0.00 0.00 0.00 2.08
45 46 2.930040 CAAATGCGACCGAGTGTTCTAT 59.070 45.455 0.00 0.00 0.00 1.98
46 47 2.288579 ACAAATGCGACCGAGTGTTCTA 60.289 45.455 0.00 0.00 0.00 2.10
47 48 1.148310 CAAATGCGACCGAGTGTTCT 58.852 50.000 0.00 0.00 0.00 3.01
48 49 0.865769 ACAAATGCGACCGAGTGTTC 59.134 50.000 0.00 0.00 0.00 3.18
49 50 1.305201 AACAAATGCGACCGAGTGTT 58.695 45.000 0.00 0.00 0.00 3.32
50 51 2.157834 TAACAAATGCGACCGAGTGT 57.842 45.000 0.00 0.00 0.00 3.55
51 52 2.734606 TCTTAACAAATGCGACCGAGTG 59.265 45.455 0.00 0.00 0.00 3.51
52 53 2.993899 CTCTTAACAAATGCGACCGAGT 59.006 45.455 0.00 0.00 0.00 4.18
53 54 3.250744 TCTCTTAACAAATGCGACCGAG 58.749 45.455 0.00 0.00 0.00 4.63
54 55 3.306917 TCTCTTAACAAATGCGACCGA 57.693 42.857 0.00 0.00 0.00 4.69
55 56 4.398549 TTTCTCTTAACAAATGCGACCG 57.601 40.909 0.00 0.00 0.00 4.79
56 57 5.938322 TGATTTCTCTTAACAAATGCGACC 58.062 37.500 0.00 0.00 0.00 4.79
57 58 6.603095 ACTGATTTCTCTTAACAAATGCGAC 58.397 36.000 0.00 0.00 0.00 5.19
58 59 6.801539 ACTGATTTCTCTTAACAAATGCGA 57.198 33.333 0.00 0.00 0.00 5.10
59 60 7.858052 AAACTGATTTCTCTTAACAAATGCG 57.142 32.000 0.00 0.00 0.00 4.73
62 63 9.764363 GGGAAAAACTGATTTCTCTTAACAAAT 57.236 29.630 9.35 0.00 36.93 2.32
63 64 8.201464 GGGGAAAAACTGATTTCTCTTAACAAA 58.799 33.333 9.29 0.00 39.31 2.83
64 65 7.563556 AGGGGAAAAACTGATTTCTCTTAACAA 59.436 33.333 9.29 0.00 39.31 2.83
65 66 7.066781 AGGGGAAAAACTGATTTCTCTTAACA 58.933 34.615 9.29 0.00 39.31 2.41
66 67 7.526142 AGGGGAAAAACTGATTTCTCTTAAC 57.474 36.000 9.29 0.00 39.31 2.01
67 68 9.649316 TTTAGGGGAAAAACTGATTTCTCTTAA 57.351 29.630 9.34 9.34 38.68 1.85
68 69 9.649316 TTTTAGGGGAAAAACTGATTTCTCTTA 57.351 29.630 9.29 5.09 39.31 2.10
69 70 8.547481 TTTTAGGGGAAAAACTGATTTCTCTT 57.453 30.769 9.29 5.82 39.31 2.85
70 71 8.727100 ATTTTAGGGGAAAAACTGATTTCTCT 57.273 30.769 9.29 9.44 40.39 3.10
84 85 9.663365 TCCTTTTCTTTCTTTATTTTAGGGGAA 57.337 29.630 0.00 0.00 0.00 3.97
85 86 9.663365 TTCCTTTTCTTTCTTTATTTTAGGGGA 57.337 29.630 0.00 0.00 0.00 4.81
122 123 3.052036 GGTACGTACGCTCTGACAAAAA 58.948 45.455 16.72 0.00 0.00 1.94
123 124 2.034432 TGGTACGTACGCTCTGACAAAA 59.966 45.455 16.72 0.00 0.00 2.44
124 125 1.608109 TGGTACGTACGCTCTGACAAA 59.392 47.619 16.72 0.00 0.00 2.83
125 126 1.237533 TGGTACGTACGCTCTGACAA 58.762 50.000 16.72 0.00 0.00 3.18
126 127 1.456296 ATGGTACGTACGCTCTGACA 58.544 50.000 16.72 9.94 0.00 3.58
127 128 2.159476 TGAATGGTACGTACGCTCTGAC 60.159 50.000 16.72 5.78 0.00 3.51
128 129 2.086094 TGAATGGTACGTACGCTCTGA 58.914 47.619 16.72 0.00 0.00 3.27
129 130 2.554806 TGAATGGTACGTACGCTCTG 57.445 50.000 16.72 0.00 0.00 3.35
130 131 2.034305 GGATGAATGGTACGTACGCTCT 59.966 50.000 16.72 3.96 0.00 4.09
131 132 2.391879 GGATGAATGGTACGTACGCTC 58.608 52.381 16.72 14.61 0.00 5.03
132 133 1.268896 CGGATGAATGGTACGTACGCT 60.269 52.381 16.72 6.25 0.00 5.07
133 134 1.126079 CGGATGAATGGTACGTACGC 58.874 55.000 16.72 12.48 0.00 4.42
134 135 1.066002 ACCGGATGAATGGTACGTACG 59.934 52.381 18.98 15.01 36.50 3.67
135 136 2.466846 CACCGGATGAATGGTACGTAC 58.533 52.381 17.56 17.56 36.50 3.67
136 137 1.202440 GCACCGGATGAATGGTACGTA 60.202 52.381 9.46 0.00 36.50 3.57
137 138 0.461339 GCACCGGATGAATGGTACGT 60.461 55.000 9.46 0.00 36.50 3.57
138 139 0.461163 TGCACCGGATGAATGGTACG 60.461 55.000 9.46 0.00 36.50 3.67
139 140 1.603802 CATGCACCGGATGAATGGTAC 59.396 52.381 9.46 0.00 40.41 3.34
140 141 1.965935 CATGCACCGGATGAATGGTA 58.034 50.000 9.46 0.00 40.41 3.25
141 142 2.797837 CATGCACCGGATGAATGGT 58.202 52.632 9.46 0.00 40.41 3.55
144 145 2.288666 GTACACATGCACCGGATGAAT 58.711 47.619 9.46 0.00 0.00 2.57
145 146 1.002544 TGTACACATGCACCGGATGAA 59.997 47.619 9.46 0.00 0.00 2.57
146 147 0.610687 TGTACACATGCACCGGATGA 59.389 50.000 9.46 0.00 0.00 2.92
147 148 0.726827 GTGTACACATGCACCGGATG 59.273 55.000 21.14 3.80 35.55 3.51
148 149 0.323302 TGTGTACACATGCACCGGAT 59.677 50.000 24.62 0.00 40.47 4.18
149 150 0.320334 CTGTGTACACATGCACCGGA 60.320 55.000 28.03 2.97 40.47 5.14
150 151 1.298157 CCTGTGTACACATGCACCGG 61.298 60.000 28.03 20.04 40.47 5.28
151 152 0.602638 ACCTGTGTACACATGCACCG 60.603 55.000 28.03 15.30 40.47 4.94
152 153 1.535462 GAACCTGTGTACACATGCACC 59.465 52.381 28.03 13.92 40.47 5.01
153 154 2.032030 GTGAACCTGTGTACACATGCAC 60.032 50.000 28.03 23.49 41.01 4.57
154 155 2.217750 GTGAACCTGTGTACACATGCA 58.782 47.619 28.03 16.81 41.01 3.96
155 156 1.535462 GGTGAACCTGTGTACACATGC 59.465 52.381 28.03 14.33 41.01 4.06
156 157 1.798223 CGGTGAACCTGTGTACACATG 59.202 52.381 28.03 26.04 41.01 3.21
157 158 1.689813 TCGGTGAACCTGTGTACACAT 59.310 47.619 28.03 14.57 41.01 3.21
158 159 1.067974 CTCGGTGAACCTGTGTACACA 59.932 52.381 26.37 26.37 39.32 3.72
159 160 1.068127 ACTCGGTGAACCTGTGTACAC 59.932 52.381 19.36 19.36 0.00 2.90
160 161 1.338973 GACTCGGTGAACCTGTGTACA 59.661 52.381 0.00 0.00 0.00 2.90
161 162 1.336609 GGACTCGGTGAACCTGTGTAC 60.337 57.143 0.00 0.00 0.00 2.90
162 163 0.963962 GGACTCGGTGAACCTGTGTA 59.036 55.000 0.00 0.00 0.00 2.90
163 164 1.746517 GGACTCGGTGAACCTGTGT 59.253 57.895 0.00 0.00 0.00 3.72
164 165 1.004918 GGGACTCGGTGAACCTGTG 60.005 63.158 0.00 0.00 0.00 3.66
165 166 0.113776 TAGGGACTCGGTGAACCTGT 59.886 55.000 0.00 0.00 41.75 4.00
166 167 0.531200 GTAGGGACTCGGTGAACCTG 59.469 60.000 0.00 0.00 41.75 4.00
167 168 0.408700 AGTAGGGACTCGGTGAACCT 59.591 55.000 0.00 0.00 41.75 3.50
168 169 1.067071 CAAGTAGGGACTCGGTGAACC 60.067 57.143 0.00 0.00 41.75 3.62
169 170 1.617357 ACAAGTAGGGACTCGGTGAAC 59.383 52.381 0.00 0.00 41.75 3.18
170 171 1.616865 CACAAGTAGGGACTCGGTGAA 59.383 52.381 4.66 0.00 40.64 3.18
171 172 1.254026 CACAAGTAGGGACTCGGTGA 58.746 55.000 4.66 0.00 40.64 4.02
172 173 0.389948 GCACAAGTAGGGACTCGGTG 60.390 60.000 5.82 5.82 40.90 4.94
173 174 0.542232 AGCACAAGTAGGGACTCGGT 60.542 55.000 0.00 0.00 41.75 4.69
174 175 0.108615 CAGCACAAGTAGGGACTCGG 60.109 60.000 0.00 0.00 41.75 4.63
175 176 0.737715 GCAGCACAAGTAGGGACTCG 60.738 60.000 0.00 0.00 41.75 4.18
176 177 0.610687 AGCAGCACAAGTAGGGACTC 59.389 55.000 0.00 0.00 41.75 3.36
177 178 1.827969 CTAGCAGCACAAGTAGGGACT 59.172 52.381 0.00 0.00 46.37 3.85
178 179 1.740718 GCTAGCAGCACAAGTAGGGAC 60.741 57.143 10.63 0.00 41.89 4.46
179 180 0.537188 GCTAGCAGCACAAGTAGGGA 59.463 55.000 10.63 0.00 41.89 4.20
180 181 0.462759 GGCTAGCAGCACAAGTAGGG 60.463 60.000 18.24 0.00 44.75 3.53
181 182 0.539051 AGGCTAGCAGCACAAGTAGG 59.461 55.000 18.24 0.00 44.75 3.18
182 183 1.649664 CAGGCTAGCAGCACAAGTAG 58.350 55.000 18.24 0.00 44.75 2.57
183 184 0.391661 GCAGGCTAGCAGCACAAGTA 60.392 55.000 22.02 0.00 44.75 2.24
184 185 1.673665 GCAGGCTAGCAGCACAAGT 60.674 57.895 22.02 0.00 44.75 3.16
185 186 0.107993 TAGCAGGCTAGCAGCACAAG 60.108 55.000 26.63 6.94 44.75 3.16
186 187 0.543277 ATAGCAGGCTAGCAGCACAA 59.457 50.000 26.63 15.37 44.75 3.33
187 188 1.413118 TATAGCAGGCTAGCAGCACA 58.587 50.000 26.63 17.10 44.75 4.57
188 189 2.758736 ATATAGCAGGCTAGCAGCAC 57.241 50.000 26.63 10.39 44.75 4.40
189 190 4.141846 GGATTATATAGCAGGCTAGCAGCA 60.142 45.833 26.63 16.09 44.75 4.41
190 191 4.141846 TGGATTATATAGCAGGCTAGCAGC 60.142 45.833 18.24 19.31 41.46 5.25
191 192 5.604758 TGGATTATATAGCAGGCTAGCAG 57.395 43.478 18.24 9.62 36.85 4.24
192 193 5.426509 ACATGGATTATATAGCAGGCTAGCA 59.573 40.000 18.24 0.00 36.85 3.49
193 194 5.757320 CACATGGATTATATAGCAGGCTAGC 59.243 44.000 6.04 6.04 31.45 3.42
194 195 7.117285 TCACATGGATTATATAGCAGGCTAG 57.883 40.000 7.14 0.00 31.45 3.42
195 196 7.681259 ATCACATGGATTATATAGCAGGCTA 57.319 36.000 3.11 3.11 29.81 3.93
196 197 6.572182 ATCACATGGATTATATAGCAGGCT 57.428 37.500 0.00 0.00 29.81 4.58
197 198 6.261826 GGAATCACATGGATTATATAGCAGGC 59.738 42.308 8.77 0.00 46.17 4.85
198 199 6.481313 CGGAATCACATGGATTATATAGCAGG 59.519 42.308 8.77 0.00 46.17 4.85
199 200 7.044181 ACGGAATCACATGGATTATATAGCAG 58.956 38.462 8.77 1.78 46.17 4.24
200 201 6.946340 ACGGAATCACATGGATTATATAGCA 58.054 36.000 8.77 0.00 46.17 3.49
201 202 7.849804 AACGGAATCACATGGATTATATAGC 57.150 36.000 8.77 0.00 46.17 2.97
202 203 9.435688 TGAAACGGAATCACATGGATTATATAG 57.564 33.333 8.77 3.76 46.17 1.31
203 204 9.785982 TTGAAACGGAATCACATGGATTATATA 57.214 29.630 8.77 0.00 46.17 0.86
204 205 8.690203 TTGAAACGGAATCACATGGATTATAT 57.310 30.769 8.77 0.00 46.17 0.86
205 206 7.255104 GCTTGAAACGGAATCACATGGATTATA 60.255 37.037 8.77 0.00 46.17 0.98
206 207 6.460123 GCTTGAAACGGAATCACATGGATTAT 60.460 38.462 8.77 0.00 46.17 1.28
207 208 5.163663 GCTTGAAACGGAATCACATGGATTA 60.164 40.000 8.77 0.00 46.17 1.75
209 210 3.129287 GCTTGAAACGGAATCACATGGAT 59.871 43.478 0.00 0.00 38.05 3.41
210 211 2.487762 GCTTGAAACGGAATCACATGGA 59.512 45.455 0.00 0.00 0.00 3.41
211 212 2.415893 GGCTTGAAACGGAATCACATGG 60.416 50.000 0.00 0.00 0.00 3.66
212 213 2.489329 AGGCTTGAAACGGAATCACATG 59.511 45.455 0.00 0.00 0.00 3.21
213 214 2.795329 AGGCTTGAAACGGAATCACAT 58.205 42.857 0.00 0.00 0.00 3.21
214 215 2.270352 AGGCTTGAAACGGAATCACA 57.730 45.000 0.00 0.00 0.00 3.58
215 216 3.643159 AAAGGCTTGAAACGGAATCAC 57.357 42.857 0.00 0.00 0.00 3.06
216 217 5.278758 CCTTAAAAGGCTTGAAACGGAATCA 60.279 40.000 0.00 0.00 39.76 2.57
217 218 5.161358 CCTTAAAAGGCTTGAAACGGAATC 58.839 41.667 0.00 0.00 39.76 2.52
218 219 4.021456 CCCTTAAAAGGCTTGAAACGGAAT 60.021 41.667 0.00 0.00 45.10 3.01
219 220 3.319689 CCCTTAAAAGGCTTGAAACGGAA 59.680 43.478 0.00 0.00 45.10 4.30
220 221 2.888414 CCCTTAAAAGGCTTGAAACGGA 59.112 45.455 0.00 0.00 45.10 4.69
221 222 3.297830 CCCTTAAAAGGCTTGAAACGG 57.702 47.619 0.00 0.00 45.10 4.44
230 231 1.525941 TGTACACGCCCTTAAAAGGC 58.474 50.000 3.03 6.17 45.10 4.35
231 232 3.672241 GCATTGTACACGCCCTTAAAAGG 60.672 47.826 0.00 1.47 46.06 3.11
232 233 3.057876 TGCATTGTACACGCCCTTAAAAG 60.058 43.478 12.66 0.00 0.00 2.27
233 234 2.885266 TGCATTGTACACGCCCTTAAAA 59.115 40.909 12.66 0.00 0.00 1.52
234 235 2.505405 TGCATTGTACACGCCCTTAAA 58.495 42.857 12.66 0.00 0.00 1.52
235 236 2.186532 TGCATTGTACACGCCCTTAA 57.813 45.000 12.66 0.00 0.00 1.85
236 237 2.411628 ATGCATTGTACACGCCCTTA 57.588 45.000 12.66 0.00 0.00 2.69
237 238 2.288666 CTATGCATTGTACACGCCCTT 58.711 47.619 3.54 2.66 0.00 3.95
238 239 1.953559 CTATGCATTGTACACGCCCT 58.046 50.000 3.54 4.55 0.00 5.19
239 240 0.307760 GCTATGCATTGTACACGCCC 59.692 55.000 3.54 0.00 0.00 6.13
240 241 0.307760 GGCTATGCATTGTACACGCC 59.692 55.000 3.54 2.55 32.10 5.68
241 242 1.261619 GAGGCTATGCATTGTACACGC 59.738 52.381 3.54 9.11 0.00 5.34
242 243 2.549926 TGAGGCTATGCATTGTACACG 58.450 47.619 3.54 0.00 0.00 4.49
243 244 3.313526 CCTTGAGGCTATGCATTGTACAC 59.686 47.826 3.54 0.21 0.00 2.90
244 245 3.054434 ACCTTGAGGCTATGCATTGTACA 60.054 43.478 3.54 2.41 39.32 2.90
245 246 3.313526 CACCTTGAGGCTATGCATTGTAC 59.686 47.826 3.54 0.42 39.32 2.90
246 247 3.199727 TCACCTTGAGGCTATGCATTGTA 59.800 43.478 3.54 0.00 39.32 2.41
247 248 2.025981 TCACCTTGAGGCTATGCATTGT 60.026 45.455 3.54 0.00 39.32 2.71
248 249 2.646930 TCACCTTGAGGCTATGCATTG 58.353 47.619 3.54 3.55 39.32 2.82
249 250 3.220110 CATCACCTTGAGGCTATGCATT 58.780 45.455 3.54 0.00 39.32 3.56
250 251 2.860009 CATCACCTTGAGGCTATGCAT 58.140 47.619 3.79 3.79 39.32 3.96
251 252 2.336945 CATCACCTTGAGGCTATGCA 57.663 50.000 0.00 0.00 39.32 3.96
270 271 2.256591 CCTACATGGCATGCGAGGC 61.257 63.158 26.96 0.00 32.09 4.70
271 272 0.035881 ATCCTACATGGCATGCGAGG 59.964 55.000 30.04 30.04 37.80 4.63
272 273 1.436600 GATCCTACATGGCATGCGAG 58.563 55.000 26.70 22.01 35.26 5.03
273 274 0.319813 CGATCCTACATGGCATGCGA 60.320 55.000 26.70 19.03 35.26 5.10
274 275 1.293963 CCGATCCTACATGGCATGCG 61.294 60.000 26.70 19.33 35.26 4.73
275 276 0.035317 TCCGATCCTACATGGCATGC 59.965 55.000 26.70 9.90 35.26 4.06
276 277 2.289882 ACATCCGATCCTACATGGCATG 60.290 50.000 25.31 25.31 35.26 4.06
277 278 1.980765 ACATCCGATCCTACATGGCAT 59.019 47.619 0.00 0.00 35.26 4.40
278 279 1.070601 CACATCCGATCCTACATGGCA 59.929 52.381 0.00 0.00 35.26 4.92
279 280 1.344438 TCACATCCGATCCTACATGGC 59.656 52.381 0.00 0.00 35.26 4.40
280 281 2.608016 CGTCACATCCGATCCTACATGG 60.608 54.545 0.00 0.00 37.10 3.66
281 282 2.034685 ACGTCACATCCGATCCTACATG 59.965 50.000 0.00 0.00 0.00 3.21
282 283 2.307768 ACGTCACATCCGATCCTACAT 58.692 47.619 0.00 0.00 0.00 2.29
283 284 1.758936 ACGTCACATCCGATCCTACA 58.241 50.000 0.00 0.00 0.00 2.74
284 285 3.976793 TTACGTCACATCCGATCCTAC 57.023 47.619 0.00 0.00 0.00 3.18
285 286 3.949754 ACTTTACGTCACATCCGATCCTA 59.050 43.478 0.00 0.00 0.00 2.94
286 287 2.758979 ACTTTACGTCACATCCGATCCT 59.241 45.455 0.00 0.00 0.00 3.24
287 288 3.160777 ACTTTACGTCACATCCGATCC 57.839 47.619 0.00 0.00 0.00 3.36
288 289 4.201990 ACCTACTTTACGTCACATCCGATC 60.202 45.833 0.00 0.00 0.00 3.69
289 290 3.698040 ACCTACTTTACGTCACATCCGAT 59.302 43.478 0.00 0.00 0.00 4.18
290 291 3.084039 ACCTACTTTACGTCACATCCGA 58.916 45.455 0.00 0.00 0.00 4.55
291 292 3.498927 ACCTACTTTACGTCACATCCG 57.501 47.619 0.00 0.00 0.00 4.18
292 293 3.855950 CGAACCTACTTTACGTCACATCC 59.144 47.826 0.00 0.00 0.00 3.51
293 294 3.855950 CCGAACCTACTTTACGTCACATC 59.144 47.826 0.00 0.00 0.00 3.06
294 295 3.507233 TCCGAACCTACTTTACGTCACAT 59.493 43.478 0.00 0.00 0.00 3.21
295 296 2.884012 TCCGAACCTACTTTACGTCACA 59.116 45.455 0.00 0.00 0.00 3.58
296 297 3.559238 TCCGAACCTACTTTACGTCAC 57.441 47.619 0.00 0.00 0.00 3.67
297 298 4.336433 CCTATCCGAACCTACTTTACGTCA 59.664 45.833 0.00 0.00 0.00 4.35
298 299 4.576463 TCCTATCCGAACCTACTTTACGTC 59.424 45.833 0.00 0.00 0.00 4.34
299 300 4.526970 TCCTATCCGAACCTACTTTACGT 58.473 43.478 0.00 0.00 0.00 3.57
300 301 5.505173 TTCCTATCCGAACCTACTTTACG 57.495 43.478 0.00 0.00 0.00 3.18
301 302 7.099120 TGTTTTCCTATCCGAACCTACTTTAC 58.901 38.462 0.00 0.00 0.00 2.01
302 303 7.243604 TGTTTTCCTATCCGAACCTACTTTA 57.756 36.000 0.00 0.00 0.00 1.85
303 304 6.117975 TGTTTTCCTATCCGAACCTACTTT 57.882 37.500 0.00 0.00 0.00 2.66
304 305 5.338137 CCTGTTTTCCTATCCGAACCTACTT 60.338 44.000 0.00 0.00 0.00 2.24
305 306 4.161754 CCTGTTTTCCTATCCGAACCTACT 59.838 45.833 0.00 0.00 0.00 2.57
306 307 4.161001 TCCTGTTTTCCTATCCGAACCTAC 59.839 45.833 0.00 0.00 0.00 3.18
307 308 4.355549 TCCTGTTTTCCTATCCGAACCTA 58.644 43.478 0.00 0.00 0.00 3.08
308 309 3.178865 TCCTGTTTTCCTATCCGAACCT 58.821 45.455 0.00 0.00 0.00 3.50
309 310 3.622166 TCCTGTTTTCCTATCCGAACC 57.378 47.619 0.00 0.00 0.00 3.62
310 311 4.127907 GGATCCTGTTTTCCTATCCGAAC 58.872 47.826 3.84 0.00 0.00 3.95
311 312 4.037927 AGGATCCTGTTTTCCTATCCGAA 58.962 43.478 15.29 0.00 40.62 4.30
312 313 3.641906 GAGGATCCTGTTTTCCTATCCGA 59.358 47.826 22.02 0.00 42.48 4.55
313 314 3.643792 AGAGGATCCTGTTTTCCTATCCG 59.356 47.826 22.02 0.00 42.48 4.18
314 315 5.222079 GAGAGGATCCTGTTTTCCTATCC 57.778 47.826 22.02 0.00 42.14 2.59
315 316 5.222079 GGAGAGGATCCTGTTTTCCTATC 57.778 47.826 22.02 0.00 45.50 2.08
332 333 4.135153 CACCCGCCTCGTGGAGAG 62.135 72.222 7.92 0.00 46.44 3.20
337 338 4.680237 TCAAGCACCCGCCTCGTG 62.680 66.667 0.00 0.00 39.83 4.35
338 339 3.883744 CTTCAAGCACCCGCCTCGT 62.884 63.158 0.00 0.00 39.83 4.18
339 340 3.121030 CTTCAAGCACCCGCCTCG 61.121 66.667 0.00 0.00 39.83 4.63
340 341 1.743252 CTCTTCAAGCACCCGCCTC 60.743 63.158 0.00 0.00 39.83 4.70
341 342 1.768684 TTCTCTTCAAGCACCCGCCT 61.769 55.000 0.00 0.00 39.83 5.52
342 343 0.889186 TTTCTCTTCAAGCACCCGCC 60.889 55.000 0.00 0.00 39.83 6.13
343 344 0.951558 TTTTCTCTTCAAGCACCCGC 59.048 50.000 0.00 0.00 38.99 6.13
344 345 2.618709 ACTTTTTCTCTTCAAGCACCCG 59.381 45.455 0.00 0.00 0.00 5.28
345 346 3.381590 ACACTTTTTCTCTTCAAGCACCC 59.618 43.478 0.00 0.00 0.00 4.61
346 347 4.354587 CACACTTTTTCTCTTCAAGCACC 58.645 43.478 0.00 0.00 0.00 5.01
347 348 4.142381 ACCACACTTTTTCTCTTCAAGCAC 60.142 41.667 0.00 0.00 0.00 4.40
348 349 4.016444 ACCACACTTTTTCTCTTCAAGCA 58.984 39.130 0.00 0.00 0.00 3.91
349 350 4.498177 GGACCACACTTTTTCTCTTCAAGC 60.498 45.833 0.00 0.00 0.00 4.01
350 351 4.260784 CGGACCACACTTTTTCTCTTCAAG 60.261 45.833 0.00 0.00 0.00 3.02
351 352 3.625764 CGGACCACACTTTTTCTCTTCAA 59.374 43.478 0.00 0.00 0.00 2.69
352 353 3.118555 TCGGACCACACTTTTTCTCTTCA 60.119 43.478 0.00 0.00 0.00 3.02
353 354 3.463944 TCGGACCACACTTTTTCTCTTC 58.536 45.455 0.00 0.00 0.00 2.87
354 355 3.553828 TCGGACCACACTTTTTCTCTT 57.446 42.857 0.00 0.00 0.00 2.85
355 356 3.071023 TCATCGGACCACACTTTTTCTCT 59.929 43.478 0.00 0.00 0.00 3.10
356 357 3.186613 GTCATCGGACCACACTTTTTCTC 59.813 47.826 0.00 0.00 38.12 2.87
357 358 3.139077 GTCATCGGACCACACTTTTTCT 58.861 45.455 0.00 0.00 38.12 2.52
358 359 2.875933 TGTCATCGGACCACACTTTTTC 59.124 45.455 0.00 0.00 43.65 2.29
359 360 2.925724 TGTCATCGGACCACACTTTTT 58.074 42.857 0.00 0.00 43.65 1.94
360 361 2.631160 TGTCATCGGACCACACTTTT 57.369 45.000 0.00 0.00 43.65 2.27
361 362 2.631160 TTGTCATCGGACCACACTTT 57.369 45.000 0.00 0.00 43.65 2.66
362 363 2.631160 TTTGTCATCGGACCACACTT 57.369 45.000 0.00 0.00 43.65 3.16
363 364 2.494059 CTTTTGTCATCGGACCACACT 58.506 47.619 0.00 0.00 43.65 3.55
364 365 1.069227 GCTTTTGTCATCGGACCACAC 60.069 52.381 0.00 0.00 43.65 3.82
365 366 1.202758 AGCTTTTGTCATCGGACCACA 60.203 47.619 0.00 0.00 43.65 4.17
366 367 1.197721 CAGCTTTTGTCATCGGACCAC 59.802 52.381 0.00 0.00 43.65 4.16
367 368 1.071542 TCAGCTTTTGTCATCGGACCA 59.928 47.619 0.00 0.00 43.65 4.02
368 369 1.808411 TCAGCTTTTGTCATCGGACC 58.192 50.000 0.00 0.00 43.65 4.46
369 370 3.896648 TTTCAGCTTTTGTCATCGGAC 57.103 42.857 0.00 0.00 44.57 4.79
370 371 3.253188 CCTTTTCAGCTTTTGTCATCGGA 59.747 43.478 0.00 0.00 0.00 4.55
371 372 3.004734 ACCTTTTCAGCTTTTGTCATCGG 59.995 43.478 0.00 0.00 0.00 4.18
372 373 4.228912 ACCTTTTCAGCTTTTGTCATCG 57.771 40.909 0.00 0.00 0.00 3.84
373 374 4.746611 CCAACCTTTTCAGCTTTTGTCATC 59.253 41.667 0.00 0.00 0.00 2.92
374 375 4.405358 TCCAACCTTTTCAGCTTTTGTCAT 59.595 37.500 0.00 0.00 0.00 3.06
375 376 3.766591 TCCAACCTTTTCAGCTTTTGTCA 59.233 39.130 0.00 0.00 0.00 3.58
376 377 4.142160 ACTCCAACCTTTTCAGCTTTTGTC 60.142 41.667 0.00 0.00 0.00 3.18
377 378 3.769300 ACTCCAACCTTTTCAGCTTTTGT 59.231 39.130 0.00 0.00 0.00 2.83
378 379 4.114794 CACTCCAACCTTTTCAGCTTTTG 58.885 43.478 0.00 0.00 0.00 2.44
379 380 4.023291 TCACTCCAACCTTTTCAGCTTTT 58.977 39.130 0.00 0.00 0.00 2.27
380 381 3.631250 TCACTCCAACCTTTTCAGCTTT 58.369 40.909 0.00 0.00 0.00 3.51
381 382 3.297134 TCACTCCAACCTTTTCAGCTT 57.703 42.857 0.00 0.00 0.00 3.74
382 383 3.297134 TTCACTCCAACCTTTTCAGCT 57.703 42.857 0.00 0.00 0.00 4.24
383 384 4.142160 ACTTTTCACTCCAACCTTTTCAGC 60.142 41.667 0.00 0.00 0.00 4.26
384 385 5.125417 TCACTTTTCACTCCAACCTTTTCAG 59.875 40.000 0.00 0.00 0.00 3.02
385 386 5.013547 TCACTTTTCACTCCAACCTTTTCA 58.986 37.500 0.00 0.00 0.00 2.69
386 387 5.576447 TCACTTTTCACTCCAACCTTTTC 57.424 39.130 0.00 0.00 0.00 2.29
387 388 5.714806 TCTTCACTTTTCACTCCAACCTTTT 59.285 36.000 0.00 0.00 0.00 2.27
388 389 5.261216 TCTTCACTTTTCACTCCAACCTTT 58.739 37.500 0.00 0.00 0.00 3.11
389 390 4.855340 TCTTCACTTTTCACTCCAACCTT 58.145 39.130 0.00 0.00 0.00 3.50
390 391 4.503714 TCTTCACTTTTCACTCCAACCT 57.496 40.909 0.00 0.00 0.00 3.50
391 392 4.557496 GCATCTTCACTTTTCACTCCAACC 60.557 45.833 0.00 0.00 0.00 3.77
392 393 4.036734 TGCATCTTCACTTTTCACTCCAAC 59.963 41.667 0.00 0.00 0.00 3.77
393 394 4.206375 TGCATCTTCACTTTTCACTCCAA 58.794 39.130 0.00 0.00 0.00 3.53
394 395 3.819368 TGCATCTTCACTTTTCACTCCA 58.181 40.909 0.00 0.00 0.00 3.86
395 396 4.217118 ACATGCATCTTCACTTTTCACTCC 59.783 41.667 0.00 0.00 0.00 3.85
396 397 5.152097 CACATGCATCTTCACTTTTCACTC 58.848 41.667 0.00 0.00 0.00 3.51
397 398 4.581824 ACACATGCATCTTCACTTTTCACT 59.418 37.500 0.00 0.00 0.00 3.41
398 399 4.863491 ACACATGCATCTTCACTTTTCAC 58.137 39.130 0.00 0.00 0.00 3.18
399 400 5.764686 AGTACACATGCATCTTCACTTTTCA 59.235 36.000 0.00 0.00 0.00 2.69
400 401 6.246420 AGTACACATGCATCTTCACTTTTC 57.754 37.500 0.00 0.00 0.00 2.29
401 402 7.161404 TCTAGTACACATGCATCTTCACTTTT 58.839 34.615 0.00 0.00 0.00 2.27
402 403 6.701340 TCTAGTACACATGCATCTTCACTTT 58.299 36.000 0.00 0.00 0.00 2.66
403 404 6.071108 ACTCTAGTACACATGCATCTTCACTT 60.071 38.462 0.00 0.00 0.00 3.16
404 405 5.420421 ACTCTAGTACACATGCATCTTCACT 59.580 40.000 0.00 0.88 0.00 3.41
405 406 5.655488 ACTCTAGTACACATGCATCTTCAC 58.345 41.667 0.00 0.00 0.00 3.18
406 407 5.921962 ACTCTAGTACACATGCATCTTCA 57.078 39.130 0.00 0.00 0.00 3.02
407 408 7.602517 AAAACTCTAGTACACATGCATCTTC 57.397 36.000 0.00 0.00 0.00 2.87
408 409 7.986085 AAAAACTCTAGTACACATGCATCTT 57.014 32.000 0.00 0.00 0.00 2.40
409 410 9.672673 AATAAAAACTCTAGTACACATGCATCT 57.327 29.630 0.00 0.00 0.00 2.90
435 436 7.790782 AGTGGGCCTCATTAAGAAATAAAAA 57.209 32.000 4.53 0.00 0.00 1.94
436 437 8.887264 TTAGTGGGCCTCATTAAGAAATAAAA 57.113 30.769 4.53 0.00 0.00 1.52
437 438 8.912988 CATTAGTGGGCCTCATTAAGAAATAAA 58.087 33.333 4.53 0.00 32.34 1.40
438 439 8.278639 TCATTAGTGGGCCTCATTAAGAAATAA 58.721 33.333 4.53 0.00 32.34 1.40
439 440 7.811282 TCATTAGTGGGCCTCATTAAGAAATA 58.189 34.615 4.53 0.00 32.34 1.40
440 441 6.672593 TCATTAGTGGGCCTCATTAAGAAAT 58.327 36.000 4.53 0.00 32.34 2.17
441 442 6.073447 TCATTAGTGGGCCTCATTAAGAAA 57.927 37.500 4.53 0.00 32.34 2.52
442 443 5.708736 TCATTAGTGGGCCTCATTAAGAA 57.291 39.130 4.53 0.00 32.34 2.52
443 444 5.912149 ATCATTAGTGGGCCTCATTAAGA 57.088 39.130 4.53 6.84 32.34 2.10
444 445 5.645497 GCTATCATTAGTGGGCCTCATTAAG 59.355 44.000 4.53 2.16 32.34 1.85
445 446 5.310594 AGCTATCATTAGTGGGCCTCATTAA 59.689 40.000 4.53 7.15 33.16 1.40
446 447 4.846367 AGCTATCATTAGTGGGCCTCATTA 59.154 41.667 4.53 0.00 0.00 1.90
447 448 3.654806 AGCTATCATTAGTGGGCCTCATT 59.345 43.478 4.53 0.00 0.00 2.57
448 449 3.254960 AGCTATCATTAGTGGGCCTCAT 58.745 45.455 4.53 0.00 0.00 2.90
449 450 2.694397 AGCTATCATTAGTGGGCCTCA 58.306 47.619 4.53 0.00 0.00 3.86
450 451 3.406764 CAAGCTATCATTAGTGGGCCTC 58.593 50.000 4.53 0.00 0.00 4.70
451 452 2.487986 GCAAGCTATCATTAGTGGGCCT 60.488 50.000 4.53 0.00 0.00 5.19
452 453 1.882623 GCAAGCTATCATTAGTGGGCC 59.117 52.381 0.00 0.00 0.00 5.80
453 454 2.575532 TGCAAGCTATCATTAGTGGGC 58.424 47.619 0.00 0.00 0.00 5.36
454 455 4.022589 CCAATGCAAGCTATCATTAGTGGG 60.023 45.833 11.56 6.74 32.22 4.61
455 456 4.823442 TCCAATGCAAGCTATCATTAGTGG 59.177 41.667 11.56 10.40 32.22 4.00
456 457 5.761726 TCTCCAATGCAAGCTATCATTAGTG 59.238 40.000 11.56 7.25 32.22 2.74
457 458 5.933617 TCTCCAATGCAAGCTATCATTAGT 58.066 37.500 11.56 0.00 32.22 2.24
458 459 5.411977 CCTCTCCAATGCAAGCTATCATTAG 59.588 44.000 11.56 6.52 32.22 1.73
459 460 5.072193 TCCTCTCCAATGCAAGCTATCATTA 59.928 40.000 11.56 0.13 32.22 1.90
460 461 4.141321 TCCTCTCCAATGCAAGCTATCATT 60.141 41.667 7.35 7.35 33.56 2.57
461 462 3.393609 TCCTCTCCAATGCAAGCTATCAT 59.606 43.478 0.00 0.00 0.00 2.45
462 463 2.773661 TCCTCTCCAATGCAAGCTATCA 59.226 45.455 0.00 0.00 0.00 2.15
463 464 3.482156 TCCTCTCCAATGCAAGCTATC 57.518 47.619 0.00 0.00 0.00 2.08
464 465 3.939740 TTCCTCTCCAATGCAAGCTAT 57.060 42.857 0.00 0.00 0.00 2.97
465 466 3.719268 TTTCCTCTCCAATGCAAGCTA 57.281 42.857 0.00 0.00 0.00 3.32
466 467 2.592102 TTTCCTCTCCAATGCAAGCT 57.408 45.000 0.00 0.00 0.00 3.74
467 468 3.665745 TTTTTCCTCTCCAATGCAAGC 57.334 42.857 0.00 0.00 0.00 4.01
468 469 7.820872 ACATTAATTTTTCCTCTCCAATGCAAG 59.179 33.333 0.00 0.00 0.00 4.01
469 470 7.678837 ACATTAATTTTTCCTCTCCAATGCAA 58.321 30.769 0.00 0.00 0.00 4.08
470 471 7.243604 ACATTAATTTTTCCTCTCCAATGCA 57.756 32.000 0.00 0.00 0.00 3.96
471 472 7.922811 CCTACATTAATTTTTCCTCTCCAATGC 59.077 37.037 0.00 0.00 0.00 3.56
472 473 8.971073 ACCTACATTAATTTTTCCTCTCCAATG 58.029 33.333 0.00 0.00 0.00 2.82
473 474 8.971073 CACCTACATTAATTTTTCCTCTCCAAT 58.029 33.333 0.00 0.00 0.00 3.16
474 475 7.093945 GCACCTACATTAATTTTTCCTCTCCAA 60.094 37.037 0.00 0.00 0.00 3.53
475 476 6.377146 GCACCTACATTAATTTTTCCTCTCCA 59.623 38.462 0.00 0.00 0.00 3.86
476 477 6.603599 AGCACCTACATTAATTTTTCCTCTCC 59.396 38.462 0.00 0.00 0.00 3.71
477 478 7.631717 AGCACCTACATTAATTTTTCCTCTC 57.368 36.000 0.00 0.00 0.00 3.20
478 479 8.422577 AAAGCACCTACATTAATTTTTCCTCT 57.577 30.769 0.00 0.00 0.00 3.69
530 531 2.814805 AGGGCATGGCATATGGATAC 57.185 50.000 22.06 0.00 0.00 2.24
531 532 5.194334 AGAATTAGGGCATGGCATATGGATA 59.806 40.000 22.06 3.03 0.00 2.59
532 533 4.016851 AGAATTAGGGCATGGCATATGGAT 60.017 41.667 22.06 6.20 0.00 3.41
533 534 3.334581 AGAATTAGGGCATGGCATATGGA 59.665 43.478 22.06 3.82 0.00 3.41
534 535 3.698040 GAGAATTAGGGCATGGCATATGG 59.302 47.826 22.06 0.00 0.00 2.74
535 536 3.376234 CGAGAATTAGGGCATGGCATATG 59.624 47.826 22.06 0.00 0.00 1.78
536 537 3.264193 TCGAGAATTAGGGCATGGCATAT 59.736 43.478 22.06 4.00 0.00 1.78
537 538 2.637382 TCGAGAATTAGGGCATGGCATA 59.363 45.455 22.06 16.14 0.00 3.14
538 539 1.421268 TCGAGAATTAGGGCATGGCAT 59.579 47.619 22.06 17.36 0.00 4.40
539 540 0.836606 TCGAGAATTAGGGCATGGCA 59.163 50.000 22.06 0.09 0.00 4.92
540 541 1.517242 CTCGAGAATTAGGGCATGGC 58.483 55.000 11.56 11.56 0.00 4.40
541 542 1.694150 TCCTCGAGAATTAGGGCATGG 59.306 52.381 15.71 0.00 33.40 3.66
542 543 2.366916 ACTCCTCGAGAATTAGGGCATG 59.633 50.000 15.71 0.00 33.40 4.06
543 544 2.683768 ACTCCTCGAGAATTAGGGCAT 58.316 47.619 15.71 0.00 33.40 4.40
544 545 2.160721 ACTCCTCGAGAATTAGGGCA 57.839 50.000 15.71 0.00 33.40 5.36
545 546 3.545366 AAACTCCTCGAGAATTAGGGC 57.455 47.619 15.71 0.00 33.40 5.19
546 547 5.488341 TCAAAAACTCCTCGAGAATTAGGG 58.512 41.667 15.71 0.00 33.40 3.53
547 548 7.334421 TGATTCAAAAACTCCTCGAGAATTAGG 59.666 37.037 15.71 0.00 33.32 2.69
548 549 8.171840 GTGATTCAAAAACTCCTCGAGAATTAG 58.828 37.037 15.71 8.16 33.32 1.73
549 550 7.148639 CGTGATTCAAAAACTCCTCGAGAATTA 60.149 37.037 15.71 0.00 33.32 1.40
550 551 6.347725 CGTGATTCAAAAACTCCTCGAGAATT 60.348 38.462 15.71 1.72 33.32 2.17
551 552 5.120830 CGTGATTCAAAAACTCCTCGAGAAT 59.879 40.000 15.71 1.95 33.32 2.40
552 553 4.447724 CGTGATTCAAAAACTCCTCGAGAA 59.552 41.667 15.71 0.00 33.32 2.87
553 554 3.987868 CGTGATTCAAAAACTCCTCGAGA 59.012 43.478 15.71 0.00 33.32 4.04
554 555 3.423645 GCGTGATTCAAAAACTCCTCGAG 60.424 47.826 5.13 5.13 35.52 4.04
555 556 2.478894 GCGTGATTCAAAAACTCCTCGA 59.521 45.455 0.00 0.00 0.00 4.04
556 557 2.721797 CGCGTGATTCAAAAACTCCTCG 60.722 50.000 0.00 0.00 0.00 4.63
557 558 2.412847 CCGCGTGATTCAAAAACTCCTC 60.413 50.000 4.92 0.00 0.00 3.71
558 559 1.535462 CCGCGTGATTCAAAAACTCCT 59.465 47.619 4.92 0.00 0.00 3.69
559 560 1.533731 TCCGCGTGATTCAAAAACTCC 59.466 47.619 4.92 0.00 0.00 3.85
560 561 2.961522 TCCGCGTGATTCAAAAACTC 57.038 45.000 4.92 0.00 0.00 3.01
561 562 3.365969 GGATTCCGCGTGATTCAAAAACT 60.366 43.478 4.92 0.00 0.00 2.66
562 563 2.914838 GGATTCCGCGTGATTCAAAAAC 59.085 45.455 4.92 0.00 0.00 2.43
563 564 2.554462 TGGATTCCGCGTGATTCAAAAA 59.446 40.909 4.92 0.00 0.00 1.94
564 565 2.155279 TGGATTCCGCGTGATTCAAAA 58.845 42.857 4.92 0.00 0.00 2.44
565 566 1.814793 TGGATTCCGCGTGATTCAAA 58.185 45.000 4.92 0.00 0.00 2.69
566 567 1.670295 CATGGATTCCGCGTGATTCAA 59.330 47.619 4.92 2.37 0.00 2.69
567 568 1.298602 CATGGATTCCGCGTGATTCA 58.701 50.000 4.92 3.66 0.00 2.57
582 583 2.743752 CGGCAACAGAGACGCATGG 61.744 63.158 0.00 0.00 0.00 3.66
587 588 4.717629 TCCGCGGCAACAGAGACG 62.718 66.667 23.51 0.00 0.00 4.18
588 589 3.112709 GTCCGCGGCAACAGAGAC 61.113 66.667 23.51 6.98 0.00 3.36
589 590 4.373116 GGTCCGCGGCAACAGAGA 62.373 66.667 23.51 0.00 0.00 3.10
602 606 2.930562 ACAGGAGTGCAGGGGTCC 60.931 66.667 0.00 0.00 0.00 4.46
612 616 2.910479 TCGCACGTGGACAGGAGT 60.910 61.111 18.88 0.00 0.00 3.85
613 617 2.430921 GTCGCACGTGGACAGGAG 60.431 66.667 23.72 0.00 34.56 3.69
806 812 4.028490 GCGATGTGGTGGGACCCA 62.028 66.667 9.95 9.95 37.50 4.51
817 823 4.162690 GAGGGGAAGGCGCGATGT 62.163 66.667 12.10 0.00 0.00 3.06
861 874 3.150731 CGACGGTTTTTATTCTGTTCGC 58.849 45.455 0.00 0.00 0.00 4.70
863 876 3.668757 GCCCGACGGTTTTTATTCTGTTC 60.669 47.826 13.94 0.00 0.00 3.18
974 996 1.228583 TGTCTCTCTGGCGTCTGGT 60.229 57.895 0.00 0.00 0.00 4.00
986 1008 2.418910 CCCATCGGCGTCTGTCTCT 61.419 63.158 6.85 0.00 0.00 3.10
987 1009 2.105128 CCCATCGGCGTCTGTCTC 59.895 66.667 6.85 0.00 0.00 3.36
1074 1099 0.883814 CCTGCTTCCGCATGATCTCC 60.884 60.000 0.00 0.00 46.74 3.71
1269 1314 1.071228 CAGATCGATCAGGCAATGGGA 59.929 52.381 26.47 0.00 0.00 4.37
1292 1337 1.404181 CGCACGAGAGAGATTGGGAAA 60.404 52.381 0.00 0.00 0.00 3.13
1335 1380 5.898174 ACAAAAGCTAACAAAAGGTGGTAC 58.102 37.500 0.00 0.00 0.00 3.34
1336 1381 7.826918 ATACAAAAGCTAACAAAAGGTGGTA 57.173 32.000 0.00 0.00 0.00 3.25
1340 1385 8.573885 GGAGTTATACAAAAGCTAACAAAAGGT 58.426 33.333 0.00 0.00 0.00 3.50
1341 1386 8.793592 AGGAGTTATACAAAAGCTAACAAAAGG 58.206 33.333 0.00 0.00 0.00 3.11
1360 1405 3.775316 GACATTCTGGGGAGAAGGAGTTA 59.225 47.826 3.65 0.00 34.21 2.24
1361 1406 2.573915 GACATTCTGGGGAGAAGGAGTT 59.426 50.000 3.65 0.00 34.21 3.01
1363 1408 1.137872 CGACATTCTGGGGAGAAGGAG 59.862 57.143 3.65 0.00 34.21 3.69
1364 1409 1.195115 CGACATTCTGGGGAGAAGGA 58.805 55.000 3.65 0.00 34.21 3.36
1365 1410 0.179000 CCGACATTCTGGGGAGAAGG 59.821 60.000 0.00 0.00 35.91 3.46
1368 1413 2.367202 GGCCGACATTCTGGGGAGA 61.367 63.158 0.00 0.00 0.00 3.71
1412 1457 9.646522 AAAAAGCTCCATGAATATATAACAGGT 57.353 29.630 0.00 0.00 0.00 4.00
1447 1492 2.504367 ACTCCGTGAATCCCTGTTTTG 58.496 47.619 0.00 0.00 0.00 2.44
1558 1603 3.371965 GGTAGAGGTGATCCCAGTGTTA 58.628 50.000 3.45 0.00 34.66 2.41
1561 1606 1.123928 GGGTAGAGGTGATCCCAGTG 58.876 60.000 3.45 0.00 39.68 3.66
1609 1654 8.801715 ACCATGATAATTTGCAATCGTTAATC 57.198 30.769 0.00 0.00 0.00 1.75
1729 1774 4.159135 GGAAGAACTACTACCGGAACATCA 59.841 45.833 9.46 0.00 0.00 3.07
1738 1784 6.749923 TCTAACTTCGGAAGAACTACTACC 57.250 41.667 23.74 0.00 46.92 3.18
1753 1799 7.137426 CCAGCAATTCAGCATATTCTAACTTC 58.863 38.462 0.00 0.00 36.85 3.01
1757 1803 7.508687 TCTACCAGCAATTCAGCATATTCTAA 58.491 34.615 0.00 0.00 36.85 2.10
1778 1824 3.181529 GCTAAAGAACGTTGCAGCTCTAC 60.182 47.826 5.00 0.00 0.00 2.59
1804 1850 3.583806 CTGCCAACAAAACACAGAACAA 58.416 40.909 0.00 0.00 0.00 2.83
1805 1851 2.094286 CCTGCCAACAAAACACAGAACA 60.094 45.455 0.00 0.00 0.00 3.18
1951 1997 8.154203 TGTGAAGAACATATTGAAGTACCAAGA 58.846 33.333 0.00 0.00 32.36 3.02
1954 2000 7.676004 TCTGTGAAGAACATATTGAAGTACCA 58.324 34.615 0.00 0.00 38.39 3.25
2248 2298 3.548014 CGAGCTGTTGGACGTTTTTCAAT 60.548 43.478 0.00 0.00 0.00 2.57
2249 2299 2.223157 CGAGCTGTTGGACGTTTTTCAA 60.223 45.455 0.00 0.00 0.00 2.69
2258 2308 3.786635 AGAATACATCGAGCTGTTGGAC 58.213 45.455 0.00 0.00 0.00 4.02
2264 2315 6.162079 ACCATCATTAGAATACATCGAGCTG 58.838 40.000 0.00 0.00 0.00 4.24
2382 2433 6.369340 CAGATGATATGTCAAGCTTGATCTCC 59.631 42.308 30.65 18.49 39.73 3.71
2440 2498 9.715121 AATTTGTCTATCGACTAAAGTAACCAA 57.285 29.630 0.00 0.00 38.14 3.67
2547 2605 1.001393 CCGGTGTGTTAATGGCCCT 60.001 57.895 0.00 0.00 0.00 5.19
2550 2608 4.443913 AATAAACCGGTGTGTTAATGGC 57.556 40.909 8.52 0.00 0.00 4.40
2616 2674 5.426509 TGGATCCACAAATGACTCTATGAGT 59.573 40.000 11.44 0.00 46.42 3.41
2646 2704 1.029947 GGCCCTTTGGGTGACGTATG 61.030 60.000 4.42 0.00 46.51 2.39
2705 2763 2.579410 TCAGGGGAGCTTTGGTAAAC 57.421 50.000 0.00 0.00 0.00 2.01
2720 2779 5.126061 ACTGCCTAAACTTATGCAATTCAGG 59.874 40.000 0.00 0.00 34.64 3.86
2726 2785 4.027674 TCCACTGCCTAAACTTATGCAA 57.972 40.909 0.00 0.00 34.64 4.08
2727 2786 3.712016 TCCACTGCCTAAACTTATGCA 57.288 42.857 0.00 0.00 34.06 3.96
2746 2805 5.127693 AGCACTACAACTGGATCGATATC 57.872 43.478 0.00 0.00 0.00 1.63
2810 2871 9.685276 TCCAATCACAAATATCTCATGTTTACT 57.315 29.630 0.00 0.00 0.00 2.24
2842 2903 5.755409 TCCAGCTAAAGTTTGTGATCCTA 57.245 39.130 0.00 0.00 0.00 2.94
2873 2934 5.520632 TCAGATTAAAAGAGCGATACCGAG 58.479 41.667 0.00 0.00 38.22 4.63
2876 2937 7.095439 CCTGAATCAGATTAAAAGAGCGATACC 60.095 40.741 12.53 0.00 32.44 2.73
2881 2942 4.878397 ACCCTGAATCAGATTAAAAGAGCG 59.122 41.667 12.53 0.00 32.44 5.03
2890 2951 6.042552 ACAGATATCGAACCCTGAATCAGATT 59.957 38.462 12.53 5.64 32.44 2.40
2935 3183 4.949856 GGGCTATTTGAAGTTCTTCCATCA 59.050 41.667 4.17 0.00 0.00 3.07
2957 3205 4.994852 TGATAGGTCGTTTGAACTCTTTGG 59.005 41.667 0.00 0.00 37.76 3.28
2959 3207 7.745620 AATTGATAGGTCGTTTGAACTCTTT 57.254 32.000 0.00 0.00 37.76 2.52
2960 3208 7.661847 AGAAATTGATAGGTCGTTTGAACTCTT 59.338 33.333 0.00 0.00 37.76 2.85
2963 3211 7.308589 CCAAGAAATTGATAGGTCGTTTGAACT 60.309 37.037 0.00 0.00 46.28 3.01
2970 3218 5.411669 GTCAACCAAGAAATTGATAGGTCGT 59.588 40.000 0.00 0.00 37.19 4.34
2992 3240 3.111853 TCATACCGATGCAGAATGGTC 57.888 47.619 5.35 0.00 35.93 4.02
3007 3255 7.327032 ACGTTAGAAAGTTTAGGACGTTCATAC 59.673 37.037 13.66 0.00 45.53 2.39
3016 3264 8.702438 CGTGATTTTACGTTAGAAAGTTTAGGA 58.298 33.333 0.00 0.00 39.13 2.94
3115 3365 3.933332 CCTTAACGGATGGAAGTTCAGAC 59.067 47.826 5.01 0.00 33.16 3.51
3250 3506 3.463944 ACACAAAACTAAGGAGGTCACG 58.536 45.455 0.00 0.00 0.00 4.35
3317 3737 5.338381 CCATAGGATGTGAAAGTGTAGTGGT 60.338 44.000 0.00 0.00 0.00 4.16
3325 3755 5.880901 ACAAGTTCCATAGGATGTGAAAGT 58.119 37.500 0.00 0.00 0.00 2.66
3343 3773 9.871238 AGTATCAACACGAGAAAATATACAAGT 57.129 29.630 0.00 0.00 0.00 3.16
3437 4512 9.413048 CCTTAGCTTAGCTTATTCTACATGTAC 57.587 37.037 13.44 0.00 40.44 2.90
3475 4550 4.127171 TCTTGGAAAGCACAGTGTTCTAC 58.873 43.478 1.61 0.00 45.70 2.59
3477 4552 3.281727 TCTTGGAAAGCACAGTGTTCT 57.718 42.857 1.61 0.00 45.70 3.01
3478 4553 4.096382 TCTTTCTTGGAAAGCACAGTGTTC 59.904 41.667 13.29 0.00 45.70 3.18
3479 4554 4.016444 TCTTTCTTGGAAAGCACAGTGTT 58.984 39.130 13.29 0.00 45.70 3.32
3480 4555 3.620488 TCTTTCTTGGAAAGCACAGTGT 58.380 40.909 13.29 0.00 45.70 3.55
3481 4556 4.142403 TGTTCTTTCTTGGAAAGCACAGTG 60.142 41.667 16.79 0.00 45.70 3.66
3484 4559 4.889409 AGATGTTCTTTCTTGGAAAGCACA 59.111 37.500 20.68 20.68 45.70 4.57
3485 4560 5.009010 TGAGATGTTCTTTCTTGGAAAGCAC 59.991 40.000 13.29 13.18 45.70 4.40
3486 4561 5.132502 TGAGATGTTCTTTCTTGGAAAGCA 58.867 37.500 13.29 8.34 45.70 3.91
3487 4562 5.695851 TGAGATGTTCTTTCTTGGAAAGC 57.304 39.130 13.29 3.82 45.70 3.51
3490 4565 7.114754 AGCATATGAGATGTTCTTTCTTGGAA 58.885 34.615 6.97 0.00 0.00 3.53
3492 4567 6.939132 AGCATATGAGATGTTCTTTCTTGG 57.061 37.500 6.97 0.00 0.00 3.61
3493 4568 7.914346 GGAAAGCATATGAGATGTTCTTTCTTG 59.086 37.037 19.89 0.00 38.44 3.02
3494 4569 7.613022 TGGAAAGCATATGAGATGTTCTTTCTT 59.387 33.333 19.89 4.65 38.44 2.52
3495 4570 7.114754 TGGAAAGCATATGAGATGTTCTTTCT 58.885 34.615 19.89 0.00 38.44 2.52
3497 4572 7.707624 TTGGAAAGCATATGAGATGTTCTTT 57.292 32.000 6.97 4.50 0.00 2.52
3499 4574 6.939132 CTTGGAAAGCATATGAGATGTTCT 57.061 37.500 6.97 0.00 36.98 3.01
3538 4798 2.118132 AATCGGGTGATTGCATGCC 58.882 52.632 16.68 0.00 43.17 4.40
3564 4824 2.127251 CGCGCTATTGCTTCTGTATGA 58.873 47.619 5.56 0.00 36.97 2.15
3595 4855 5.394883 CCTCTGGTTTGTACGTATATGGTGT 60.395 44.000 0.00 0.00 0.00 4.16
3805 5070 1.590147 CGCCGTCTAGTTCCAAGGT 59.410 57.895 0.00 0.00 0.00 3.50
4047 5323 2.285977 GTTACTGTAATGGAAGCCGGG 58.714 52.381 2.18 0.00 0.00 5.73
4053 5329 5.836024 ACTTCCTGGTTACTGTAATGGAA 57.164 39.130 20.62 20.62 0.00 3.53
4054 5330 6.021030 AGTACTTCCTGGTTACTGTAATGGA 58.979 40.000 3.23 9.11 0.00 3.41
4055 5331 6.295719 AGTACTTCCTGGTTACTGTAATGG 57.704 41.667 3.23 7.10 0.00 3.16
4057 5333 7.673082 ACTGTAGTACTTCCTGGTTACTGTAAT 59.327 37.037 0.00 4.93 0.00 1.89
4059 5335 6.546484 ACTGTAGTACTTCCTGGTTACTGTA 58.454 40.000 0.00 0.00 0.00 2.74
4060 5336 5.392125 ACTGTAGTACTTCCTGGTTACTGT 58.608 41.667 0.00 0.00 0.00 3.55
4061 5337 5.979288 ACTGTAGTACTTCCTGGTTACTG 57.021 43.478 0.00 0.00 0.00 2.74
4063 5339 7.175641 TCAACTACTGTAGTACTTCCTGGTTAC 59.824 40.741 19.97 0.00 38.26 2.50
4064 5340 7.175641 GTCAACTACTGTAGTACTTCCTGGTTA 59.824 40.741 19.97 0.00 38.26 2.85
4065 5341 6.015603 GTCAACTACTGTAGTACTTCCTGGTT 60.016 42.308 19.97 0.00 38.26 3.67
4076 5352 6.281405 CAACTGGAAAGTCAACTACTGTAGT 58.719 40.000 14.53 14.53 38.88 2.73
4080 5356 4.703897 TCCAACTGGAAAGTCAACTACTG 58.296 43.478 0.00 0.00 42.18 2.74
4100 5378 3.244561 TGTGAAGGGATCTTTGTCAGTCC 60.245 47.826 0.00 0.00 32.52 3.85
4115 5396 1.686325 ATCGATCCCGGGTGTGAAGG 61.686 60.000 22.86 4.26 36.24 3.46
4154 5439 2.737252 GCCGAAGTTCTTGTACTTGAGG 59.263 50.000 0.56 0.00 38.43 3.86
4155 5440 2.408704 CGCCGAAGTTCTTGTACTTGAG 59.591 50.000 0.56 0.00 38.43 3.02
4157 5442 2.400399 TCGCCGAAGTTCTTGTACTTG 58.600 47.619 0.56 0.00 38.43 3.16


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.