Multiple sequence alignment - TraesCS2B01G335800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G335800 chr2B 100.000 2913 0 0 1 2913 479983990 479986902 0.000000e+00 5380
1 TraesCS2B01G335800 chr2B 88.673 309 35 0 1523 1831 479985437 479985745 7.620000e-101 377
2 TraesCS2B01G335800 chr2B 88.673 309 35 0 1448 1756 479985512 479985820 7.620000e-101 377
3 TraesCS2B01G335800 chr2B 90.598 234 22 0 1598 1831 479985437 479985670 7.840000e-81 311
4 TraesCS2B01G335800 chr2B 90.598 234 22 0 1448 1681 479985587 479985820 7.840000e-81 311
5 TraesCS2B01G335800 chr2B 89.937 159 16 0 1448 1606 479985662 479985820 3.810000e-49 206
6 TraesCS2B01G335800 chr2B 79.365 252 43 6 1 249 286493169 286493414 4.990000e-38 169
7 TraesCS2B01G335800 chr2D 91.646 1185 68 14 993 2148 405073404 405074586 0.000000e+00 1611
8 TraesCS2B01G335800 chr2D 90.120 749 64 6 1 742 405072344 405073089 0.000000e+00 965
9 TraesCS2B01G335800 chr2D 90.291 309 30 0 1523 1831 405073865 405074173 3.500000e-109 405
10 TraesCS2B01G335800 chr2D 91.453 234 20 0 1448 1681 405074015 405074248 3.620000e-84 322
11 TraesCS2B01G335800 chr2D 92.093 215 8 5 717 928 405073098 405073306 7.890000e-76 294
12 TraesCS2B01G335800 chr2D 90.909 121 11 0 2683 2803 116827306 116827426 2.320000e-36 163
13 TraesCS2B01G335800 chr2D 88.189 127 13 2 2681 2807 220966582 220966706 1.810000e-32 150
14 TraesCS2B01G335800 chr2A 88.654 1040 94 13 1448 2479 543157475 543158498 0.000000e+00 1245
15 TraesCS2B01G335800 chr2A 89.261 866 63 11 993 1828 543156921 543157786 0.000000e+00 1057
16 TraesCS2B01G335800 chr2A 88.235 544 34 13 469 986 543156344 543156883 8.860000e-175 623
17 TraesCS2B01G335800 chr2A 91.111 315 22 4 1523 1831 543157400 543157714 3.470000e-114 422
18 TraesCS2B01G335800 chr2A 89.030 237 23 3 1598 1831 543157400 543157636 1.020000e-74 291
19 TraesCS2B01G335800 chr2A 91.195 159 14 0 1448 1606 543157706 543157864 1.760000e-52 217
20 TraesCS2B01G335800 chr2A 88.976 127 12 2 2681 2807 240467231 240467355 3.890000e-34 156
21 TraesCS2B01G335800 chr7A 83.399 253 38 3 1 251 194789790 194790040 6.280000e-57 231
22 TraesCS2B01G335800 chr7D 82.800 250 41 2 1 249 563605509 563605757 3.780000e-54 222
23 TraesCS2B01G335800 chr5B 84.932 219 29 4 37 252 712961871 712962088 4.890000e-53 219
24 TraesCS2B01G335800 chr5B 90.756 119 11 0 2681 2799 525131347 525131465 3.000000e-35 159
25 TraesCS2B01G335800 chr1A 81.890 254 41 5 1 251 514052547 514052296 2.940000e-50 209
26 TraesCS2B01G335800 chr1A 83.945 218 22 4 2 218 64807254 64807459 2.290000e-46 196
27 TraesCS2B01G335800 chr3D 84.541 207 29 3 46 250 332234641 332234846 4.920000e-48 202
28 TraesCS2B01G335800 chr3D 81.974 233 32 6 1 230 5010301 5010526 3.830000e-44 189
29 TraesCS2B01G335800 chr4B 90.909 121 11 0 2683 2803 486280067 486279947 2.320000e-36 163
30 TraesCS2B01G335800 chr6D 90.678 118 11 0 2682 2799 108860648 108860765 1.080000e-34 158
31 TraesCS2B01G335800 chr6D 90.083 121 11 1 2683 2803 39092799 39092680 3.890000e-34 156
32 TraesCS2B01G335800 chr3B 90.000 120 10 2 2681 2799 718844679 718844797 1.400000e-33 154
33 TraesCS2B01G335800 chr6B 88.095 126 15 0 2674 2799 618132535 618132660 1.810000e-32 150


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G335800 chr2B 479983990 479986902 2912 False 1160.333333 5380 91.413167 1 2913 6 chr2B.!!$F2 2912
1 TraesCS2B01G335800 chr2D 405072344 405074586 2242 False 719.400000 1611 91.120600 1 2148 5 chr2D.!!$F3 2147
2 TraesCS2B01G335800 chr2A 543156344 543158498 2154 False 642.500000 1245 89.581000 469 2479 6 chr2A.!!$F2 2010

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
496 499 0.257905 ACCAGCCATGATGATGCAGT 59.742 50.0 0.0 0.0 0.0 4.4 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2487 2727 0.096454 GGTCGTGCCAACTTTATCGC 59.904 55.0 0.0 0.0 37.17 4.58 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
61 63 3.564218 GGCCTCCCCGCATGAGAT 61.564 66.667 0.00 0.00 31.26 2.75
73 75 2.738938 ATGAGATGCCGCCTCTGCA 61.739 57.895 2.55 2.33 43.97 4.41
113 115 3.402681 CACCCGCCCTGGATCTGT 61.403 66.667 0.00 0.00 42.00 3.41
115 117 4.181010 CCCGCCCTGGATCTGTGG 62.181 72.222 0.00 0.00 42.00 4.17
119 121 2.976490 GCCCTGGATCTGTGGTGCT 61.976 63.158 0.00 0.00 0.00 4.40
150 152 3.009192 ATCGCGACCTTTACCGGCA 62.009 57.895 12.93 0.00 0.00 5.69
151 153 2.901051 ATCGCGACCTTTACCGGCAG 62.901 60.000 12.93 0.00 0.00 4.85
158 160 3.950794 CTTTACCGGCAGCAGCGGA 62.951 63.158 16.13 0.00 43.11 5.54
159 161 4.752879 TTACCGGCAGCAGCGGAC 62.753 66.667 16.13 0.00 43.11 4.79
177 179 2.825836 GCTGGGGATGGAGCAACG 60.826 66.667 0.00 0.00 35.15 4.10
178 180 2.124570 CTGGGGATGGAGCAACGG 60.125 66.667 0.00 0.00 0.00 4.44
187 189 3.319198 GAGCAACGGGGAGGGACA 61.319 66.667 0.00 0.00 0.00 4.02
275 278 5.717119 AGCCATGATGTTGATGTTTTTCTC 58.283 37.500 0.00 0.00 0.00 2.87
276 279 4.866486 GCCATGATGTTGATGTTTTTCTCC 59.134 41.667 0.00 0.00 0.00 3.71
315 318 3.980646 AACGCAACAAGTAGCATCAAA 57.019 38.095 0.00 0.00 0.00 2.69
357 360 2.754658 ACCCGGTCTCTGCGTAGG 60.755 66.667 0.00 0.00 0.00 3.18
358 361 4.208686 CCCGGTCTCTGCGTAGGC 62.209 72.222 0.00 0.00 40.52 3.93
396 399 1.535462 CCAAAGGCACCAAGTCTAACG 59.465 52.381 0.00 0.00 0.00 3.18
404 407 3.678548 GCACCAAGTCTAACGTAGAAAGG 59.321 47.826 0.00 0.00 36.40 3.11
419 422 7.570161 ACGTAGAAAGGAAATAAAACGACAAG 58.430 34.615 0.00 0.00 33.59 3.16
446 449 8.855110 TCAGCACCAGTAAAGATGAAAATAAAA 58.145 29.630 0.00 0.00 0.00 1.52
447 450 8.915654 CAGCACCAGTAAAGATGAAAATAAAAC 58.084 33.333 0.00 0.00 0.00 2.43
494 497 2.173143 TCTAACCAGCCATGATGATGCA 59.827 45.455 0.00 0.00 0.00 3.96
496 499 0.257905 ACCAGCCATGATGATGCAGT 59.742 50.000 0.00 0.00 0.00 4.40
604 612 1.461091 GCCTATCGGGATCACACGGA 61.461 60.000 0.00 0.00 43.75 4.69
643 651 4.530857 GACGCATGGGTCCCCTCG 62.531 72.222 27.72 8.66 36.94 4.63
645 653 3.151710 CGCATGGGTCCCCTCGTA 61.152 66.667 5.13 0.00 36.94 3.43
697 706 1.277557 GCAGTCTTGTCCTCAGTCCAT 59.722 52.381 0.00 0.00 0.00 3.41
740 785 3.051803 TCTCTCCCTCTCTCTCTCTCTCT 60.052 52.174 0.00 0.00 0.00 3.10
744 799 1.541233 CCTCTCTCTCTCTCTCTCGCC 60.541 61.905 0.00 0.00 0.00 5.54
791 850 3.846405 AAGGCCACCTCGTCTCCCA 62.846 63.158 5.01 0.00 30.89 4.37
794 853 3.391382 CCACCTCGTCTCCCACCC 61.391 72.222 0.00 0.00 0.00 4.61
795 854 3.391382 CACCTCGTCTCCCACCCC 61.391 72.222 0.00 0.00 0.00 4.95
796 855 4.716977 ACCTCGTCTCCCACCCCC 62.717 72.222 0.00 0.00 0.00 5.40
817 883 0.981277 ATCTCCAACCCTACCCCGTG 60.981 60.000 0.00 0.00 0.00 4.94
840 906 1.476845 TACCTCACGAAAGCTGCCCA 61.477 55.000 0.00 0.00 0.00 5.36
932 998 5.292345 CGCTACGAGCATCTACATATCTACT 59.708 44.000 7.47 0.00 42.58 2.57
933 999 6.482835 GCTACGAGCATCTACATATCTACTG 58.517 44.000 0.00 0.00 41.89 2.74
936 1002 9.535878 CTACGAGCATCTACATATCTACTGATA 57.464 37.037 0.00 0.00 39.25 2.15
986 1069 3.065787 ATCCCATCCACCTGCAGCC 62.066 63.158 8.66 0.00 0.00 4.85
1129 1249 2.901840 ACAGGTGTGTGCCTTGCG 60.902 61.111 0.00 0.00 36.58 4.85
1155 1281 2.715005 CTCGCTCGAGCTCTCCTG 59.285 66.667 32.88 17.57 39.32 3.86
1171 1303 2.155279 TCCTGTCGATCGATCCATCTC 58.845 52.381 22.50 6.89 0.00 2.75
1177 1309 1.882623 CGATCGATCCATCTCACCTGA 59.117 52.381 19.51 0.00 0.00 3.86
1178 1310 2.351253 CGATCGATCCATCTCACCTGAC 60.351 54.545 19.51 0.00 0.00 3.51
1184 1316 0.108615 CCATCTCACCTGACCGTGTC 60.109 60.000 0.00 0.00 35.18 3.67
1219 1351 4.762251 TGTAGATACTGCAGCGATCTGTAT 59.238 41.667 29.23 14.66 42.29 2.29
1279 1411 4.496336 GAGCCCGCAGAAGCCCAT 62.496 66.667 0.00 0.00 37.52 4.00
1305 1443 4.680237 CCACGCTCAGCCGGTGAA 62.680 66.667 1.90 0.00 33.60 3.18
1306 1444 2.664851 CACGCTCAGCCGGTGAAA 60.665 61.111 1.90 0.00 33.60 2.69
1308 1446 1.525077 ACGCTCAGCCGGTGAAAAA 60.525 52.632 1.90 0.00 33.60 1.94
1414 1552 1.154016 CACCACTGCTACGAGGTCG 60.154 63.158 0.00 0.00 46.33 4.79
1519 1657 4.699522 GCGAAGGGGAACAGCGGT 62.700 66.667 0.00 0.00 0.00 5.68
1524 1662 2.668550 GGGGAACAGCGGTGACAC 60.669 66.667 23.44 15.18 0.00 3.67
1550 1688 2.637383 AAGGTCGACGAGAGGCCAC 61.637 63.158 9.92 0.00 33.32 5.01
1594 1732 2.126850 GCGAAAGGAAACAGCGGC 60.127 61.111 0.00 0.00 0.00 6.53
1619 1757 0.810016 GAAGCCTAAGGTCGACGAGT 59.190 55.000 9.92 0.00 0.00 4.18
1971 2191 0.179045 AGCCAAATAGCTAGCCACCG 60.179 55.000 12.13 0.00 42.70 4.94
2029 2266 4.023739 ACGGGTTTTTCGTCTCTTTTTG 57.976 40.909 0.00 0.00 35.87 2.44
2064 2301 0.677288 ACCGTGCTAGTGCTGTACAA 59.323 50.000 0.00 0.00 40.48 2.41
2084 2321 6.144078 ACAAATCTTAAGCCGTCAGTTTTT 57.856 33.333 0.00 0.00 0.00 1.94
2107 2347 4.672587 ATACCAGTTGACGTGCATAGAT 57.327 40.909 0.00 0.00 0.00 1.98
2110 2350 2.621338 CAGTTGACGTGCATAGATGGT 58.379 47.619 0.00 0.00 0.00 3.55
2125 2365 2.812011 AGATGGTGCGGTTTGACTTTAC 59.188 45.455 0.00 0.00 0.00 2.01
2162 2402 1.671850 GCTGGTGCGACTGCTTTAGTA 60.672 52.381 0.00 0.00 40.53 1.82
2198 2438 3.741029 TGCTCCGTGAAGCATAGAC 57.259 52.632 0.73 0.00 47.00 2.59
2208 2448 1.834263 GAAGCATAGACTGGAGGTGGT 59.166 52.381 0.00 0.00 0.00 4.16
2221 2461 2.580601 GGTGGTAGTGAGCGGTGGT 61.581 63.158 0.00 0.00 0.00 4.16
2229 2469 2.106332 GAGCGGTGGTATGTCGGG 59.894 66.667 0.00 0.00 0.00 5.14
2236 2476 2.030562 GGTATGTCGGGGCGATGG 59.969 66.667 0.00 0.00 38.42 3.51
2251 2491 0.463474 GATGGCCTGCTTCCAGAGAC 60.463 60.000 3.32 0.00 41.77 3.36
2258 2498 1.270826 CTGCTTCCAGAGACGAGTCAA 59.729 52.381 5.99 0.00 41.77 3.18
2264 2504 2.234661 TCCAGAGACGAGTCAATGCAAT 59.765 45.455 5.99 0.00 0.00 3.56
2276 2516 4.880120 AGTCAATGCAATAGTCATGGTCTG 59.120 41.667 0.00 0.00 0.00 3.51
2277 2517 3.628942 TCAATGCAATAGTCATGGTCTGC 59.371 43.478 0.00 0.00 0.00 4.26
2290 2530 1.291272 GTCTGCGAACGGTTACCCT 59.709 57.895 0.00 0.00 0.00 4.34
2298 2538 0.886043 AACGGTTACCCTTCGCAACC 60.886 55.000 0.00 0.00 38.68 3.77
2303 2543 2.614779 GTTACCCTTCGCAACCTAGAC 58.385 52.381 0.00 0.00 0.00 2.59
2305 2545 2.226962 ACCCTTCGCAACCTAGACTA 57.773 50.000 0.00 0.00 0.00 2.59
2308 2548 3.890147 ACCCTTCGCAACCTAGACTATAG 59.110 47.826 0.00 0.00 0.00 1.31
2319 2559 4.087907 CCTAGACTATAGGTGGTTAGGCC 58.912 52.174 4.43 0.00 37.90 5.19
2361 2601 1.518572 GCGTGGTGGTATGTCGGAG 60.519 63.158 0.00 0.00 0.00 4.63
2363 2603 1.594833 GTGGTGGTATGTCGGAGCA 59.405 57.895 0.00 0.00 0.00 4.26
2365 2605 0.902984 TGGTGGTATGTCGGAGCAGT 60.903 55.000 0.00 0.00 0.00 4.40
2372 2612 3.075005 GTCGGAGCAGTGGCCCTA 61.075 66.667 0.00 0.00 42.56 3.53
2373 2613 2.759973 TCGGAGCAGTGGCCCTAG 60.760 66.667 0.00 0.00 42.56 3.02
2376 2616 1.899437 CGGAGCAGTGGCCCTAGAAA 61.899 60.000 0.00 0.00 42.56 2.52
2388 2628 2.731572 CCCTAGAAAGTGAGGTCGGTA 58.268 52.381 0.00 0.00 0.00 4.02
2403 2643 2.407428 GGTAAGCCGGGCAAGAAGC 61.407 63.158 23.09 8.93 44.65 3.86
2414 2654 1.301677 GCAAGAAGCCCAAGGTCGAG 61.302 60.000 0.00 0.00 37.23 4.04
2415 2655 0.674895 CAAGAAGCCCAAGGTCGAGG 60.675 60.000 0.00 0.00 0.00 4.63
2421 2661 1.545706 GCCCAAGGTCGAGGAGAAGT 61.546 60.000 0.00 0.00 0.00 3.01
2425 2665 0.892063 AAGGTCGAGGAGAAGTCAGC 59.108 55.000 0.00 0.00 0.00 4.26
2427 2667 1.515304 GTCGAGGAGAAGTCAGCGC 60.515 63.158 0.00 0.00 0.00 5.92
2452 2692 4.101448 GTCGCTGGGGATGGCAGT 62.101 66.667 0.00 0.00 0.00 4.40
2464 2704 0.482446 ATGGCAGTGAAGGGGAACAA 59.518 50.000 0.00 0.00 0.00 2.83
2473 2713 2.018515 GAAGGGGAACAACAACGACAA 58.981 47.619 0.00 0.00 0.00 3.18
2479 2719 2.540973 GGAACAACAACGACAAGAAGCC 60.541 50.000 0.00 0.00 0.00 4.35
2480 2720 0.655733 ACAACAACGACAAGAAGCCG 59.344 50.000 0.00 0.00 0.00 5.52
2481 2721 0.934496 CAACAACGACAAGAAGCCGA 59.066 50.000 0.00 0.00 0.00 5.54
2482 2722 1.531149 CAACAACGACAAGAAGCCGAT 59.469 47.619 0.00 0.00 0.00 4.18
2483 2723 1.148310 ACAACGACAAGAAGCCGATG 58.852 50.000 0.00 0.00 33.35 3.84
2484 2724 0.179215 CAACGACAAGAAGCCGATGC 60.179 55.000 0.00 0.00 37.95 3.91
2485 2725 0.602638 AACGACAAGAAGCCGATGCA 60.603 50.000 0.00 0.00 41.13 3.96
2486 2726 0.602638 ACGACAAGAAGCCGATGCAA 60.603 50.000 0.00 0.00 41.13 4.08
2487 2727 0.095935 CGACAAGAAGCCGATGCAAG 59.904 55.000 0.00 0.00 41.13 4.01
2488 2728 0.179179 GACAAGAAGCCGATGCAAGC 60.179 55.000 0.00 0.00 41.13 4.01
2500 2740 2.454055 GATGCAAGCGATAAAGTTGGC 58.546 47.619 0.00 0.00 0.00 4.52
2501 2741 1.242989 TGCAAGCGATAAAGTTGGCA 58.757 45.000 0.00 0.00 0.00 4.92
2502 2742 1.068610 TGCAAGCGATAAAGTTGGCAC 60.069 47.619 0.00 0.00 0.00 5.01
2503 2743 1.882198 CAAGCGATAAAGTTGGCACG 58.118 50.000 0.00 0.00 0.00 5.34
2504 2744 1.463056 CAAGCGATAAAGTTGGCACGA 59.537 47.619 0.00 0.00 0.00 4.35
2505 2745 1.076332 AGCGATAAAGTTGGCACGAC 58.924 50.000 0.00 0.00 0.00 4.34
2506 2746 0.096454 GCGATAAAGTTGGCACGACC 59.904 55.000 0.00 0.00 39.84 4.79
2514 2754 3.000819 TGGCACGACCAGGTAGGG 61.001 66.667 4.53 0.34 46.36 3.53
2515 2755 3.001406 GGCACGACCAGGTAGGGT 61.001 66.667 3.59 0.00 46.02 4.34
2522 2762 2.773458 ACCAGGTAGGGTCAAGGTG 58.227 57.895 0.00 0.00 43.89 4.00
2523 2763 0.192566 ACCAGGTAGGGTCAAGGTGA 59.807 55.000 0.00 0.00 43.89 4.02
2524 2764 0.905357 CCAGGTAGGGTCAAGGTGAG 59.095 60.000 0.00 0.00 0.00 3.51
2525 2765 0.905357 CAGGTAGGGTCAAGGTGAGG 59.095 60.000 0.00 0.00 0.00 3.86
2526 2766 0.790993 AGGTAGGGTCAAGGTGAGGA 59.209 55.000 0.00 0.00 0.00 3.71
2527 2767 1.196012 GGTAGGGTCAAGGTGAGGAG 58.804 60.000 0.00 0.00 0.00 3.69
2528 2768 1.196012 GTAGGGTCAAGGTGAGGAGG 58.804 60.000 0.00 0.00 0.00 4.30
2529 2769 0.790993 TAGGGTCAAGGTGAGGAGGT 59.209 55.000 0.00 0.00 0.00 3.85
2530 2770 0.838122 AGGGTCAAGGTGAGGAGGTG 60.838 60.000 0.00 0.00 0.00 4.00
2531 2771 1.003233 GGTCAAGGTGAGGAGGTGC 60.003 63.158 0.00 0.00 0.00 5.01
2532 2772 1.754745 GTCAAGGTGAGGAGGTGCA 59.245 57.895 0.00 0.00 0.00 4.57
2533 2773 0.108585 GTCAAGGTGAGGAGGTGCAA 59.891 55.000 0.00 0.00 0.00 4.08
2534 2774 0.397941 TCAAGGTGAGGAGGTGCAAG 59.602 55.000 0.00 0.00 0.00 4.01
2535 2775 1.073897 AAGGTGAGGAGGTGCAAGC 59.926 57.895 0.00 0.00 0.00 4.01
2543 2783 3.580084 AGGTGCAAGCTCCTTGGA 58.420 55.556 9.72 1.28 44.61 3.53
2544 2784 1.377994 AGGTGCAAGCTCCTTGGAG 59.622 57.895 12.07 12.07 44.61 3.86
2545 2785 1.676967 GGTGCAAGCTCCTTGGAGG 60.677 63.158 17.33 0.00 42.06 4.30
2546 2786 1.073897 GTGCAAGCTCCTTGGAGGT 59.926 57.895 14.85 14.85 42.06 3.85
2547 2787 1.073722 TGCAAGCTCCTTGGAGGTG 59.926 57.895 20.29 15.06 41.31 4.00
2548 2788 1.073897 GCAAGCTCCTTGGAGGTGT 59.926 57.895 20.29 9.25 41.31 4.16
2549 2789 1.239968 GCAAGCTCCTTGGAGGTGTG 61.240 60.000 20.29 18.89 41.31 3.82
2550 2790 0.397941 CAAGCTCCTTGGAGGTGTGA 59.602 55.000 20.29 0.00 37.77 3.58
2551 2791 0.689623 AAGCTCCTTGGAGGTGTGAG 59.310 55.000 20.29 0.00 36.53 3.51
2552 2792 0.178921 AGCTCCTTGGAGGTGTGAGA 60.179 55.000 19.12 0.00 36.53 3.27
2553 2793 0.687354 GCTCCTTGGAGGTGTGAGAA 59.313 55.000 17.33 0.00 36.53 2.87
2554 2794 1.280421 GCTCCTTGGAGGTGTGAGAAT 59.720 52.381 17.33 0.00 36.53 2.40
2555 2795 2.501723 GCTCCTTGGAGGTGTGAGAATA 59.498 50.000 17.33 0.00 36.53 1.75
2556 2796 3.055094 GCTCCTTGGAGGTGTGAGAATAA 60.055 47.826 17.33 0.00 36.53 1.40
2557 2797 4.565652 GCTCCTTGGAGGTGTGAGAATAAA 60.566 45.833 17.33 0.00 36.53 1.40
2558 2798 5.560724 CTCCTTGGAGGTGTGAGAATAAAA 58.439 41.667 8.74 0.00 36.53 1.52
2559 2799 5.560724 TCCTTGGAGGTGTGAGAATAAAAG 58.439 41.667 0.00 0.00 36.53 2.27
2560 2800 4.702131 CCTTGGAGGTGTGAGAATAAAAGG 59.298 45.833 0.00 0.00 0.00 3.11
2561 2801 4.301072 TGGAGGTGTGAGAATAAAAGGG 57.699 45.455 0.00 0.00 0.00 3.95
2562 2802 3.010138 TGGAGGTGTGAGAATAAAAGGGG 59.990 47.826 0.00 0.00 0.00 4.79
2563 2803 3.265995 GGAGGTGTGAGAATAAAAGGGGA 59.734 47.826 0.00 0.00 0.00 4.81
2564 2804 4.263771 GGAGGTGTGAGAATAAAAGGGGAA 60.264 45.833 0.00 0.00 0.00 3.97
2565 2805 4.923415 AGGTGTGAGAATAAAAGGGGAAG 58.077 43.478 0.00 0.00 0.00 3.46
2566 2806 3.444034 GGTGTGAGAATAAAAGGGGAAGC 59.556 47.826 0.00 0.00 0.00 3.86
2567 2807 4.079253 GTGTGAGAATAAAAGGGGAAGCA 58.921 43.478 0.00 0.00 0.00 3.91
2568 2808 4.156739 GTGTGAGAATAAAAGGGGAAGCAG 59.843 45.833 0.00 0.00 0.00 4.24
2569 2809 3.129462 GTGAGAATAAAAGGGGAAGCAGC 59.871 47.826 0.00 0.00 0.00 5.25
2570 2810 3.010584 TGAGAATAAAAGGGGAAGCAGCT 59.989 43.478 0.00 0.00 0.00 4.24
2571 2811 4.227300 TGAGAATAAAAGGGGAAGCAGCTA 59.773 41.667 0.00 0.00 0.00 3.32
2572 2812 4.786425 AGAATAAAAGGGGAAGCAGCTAG 58.214 43.478 0.00 0.00 0.00 3.42
2573 2813 2.420058 TAAAAGGGGAAGCAGCTAGC 57.580 50.000 6.62 6.62 46.19 3.42
2582 2822 2.501128 GCAGCTAGCCACCATCGA 59.499 61.111 12.13 0.00 37.23 3.59
2583 2823 1.884926 GCAGCTAGCCACCATCGAC 60.885 63.158 12.13 0.00 37.23 4.20
2584 2824 1.517361 CAGCTAGCCACCATCGACA 59.483 57.895 12.13 0.00 0.00 4.35
2585 2825 0.807667 CAGCTAGCCACCATCGACAC 60.808 60.000 12.13 0.00 0.00 3.67
2586 2826 1.218047 GCTAGCCACCATCGACACA 59.782 57.895 2.29 0.00 0.00 3.72
2587 2827 0.179073 GCTAGCCACCATCGACACAT 60.179 55.000 2.29 0.00 0.00 3.21
2588 2828 1.575244 CTAGCCACCATCGACACATG 58.425 55.000 0.00 0.00 0.00 3.21
2589 2829 0.901827 TAGCCACCATCGACACATGT 59.098 50.000 0.00 0.00 0.00 3.21
2590 2830 0.391661 AGCCACCATCGACACATGTC 60.392 55.000 0.00 1.70 41.47 3.06
2608 2848 9.710900 ACACATGTCGATGAATGTATATATTGT 57.289 29.630 0.00 2.27 35.28 2.71
2615 2855 9.361315 TCGATGAATGTATATATTGTTTACCCG 57.639 33.333 0.00 0.00 0.00 5.28
2616 2856 8.114290 CGATGAATGTATATATTGTTTACCCGC 58.886 37.037 0.00 0.00 0.00 6.13
2617 2857 7.675962 TGAATGTATATATTGTTTACCCGCC 57.324 36.000 0.00 0.00 0.00 6.13
2618 2858 7.225011 TGAATGTATATATTGTTTACCCGCCA 58.775 34.615 0.00 0.00 0.00 5.69
2619 2859 7.885922 TGAATGTATATATTGTTTACCCGCCAT 59.114 33.333 0.00 0.00 0.00 4.40
2620 2860 9.386010 GAATGTATATATTGTTTACCCGCCATA 57.614 33.333 0.00 0.00 0.00 2.74
2621 2861 9.914834 AATGTATATATTGTTTACCCGCCATAT 57.085 29.630 0.00 0.00 0.00 1.78
2623 2863 9.820725 TGTATATATTGTTTACCCGCCATATAC 57.179 33.333 0.00 0.00 33.90 1.47
2624 2864 9.820725 GTATATATTGTTTACCCGCCATATACA 57.179 33.333 0.00 0.00 33.67 2.29
2626 2866 7.681939 ATATTGTTTACCCGCCATATACAAG 57.318 36.000 0.00 0.00 30.41 3.16
2627 2867 4.490899 TGTTTACCCGCCATATACAAGT 57.509 40.909 0.00 0.00 0.00 3.16
2628 2868 4.846040 TGTTTACCCGCCATATACAAGTT 58.154 39.130 0.00 0.00 0.00 2.66
2629 2869 5.254901 TGTTTACCCGCCATATACAAGTTT 58.745 37.500 0.00 0.00 0.00 2.66
2630 2870 5.711036 TGTTTACCCGCCATATACAAGTTTT 59.289 36.000 0.00 0.00 0.00 2.43
2631 2871 6.208994 TGTTTACCCGCCATATACAAGTTTTT 59.791 34.615 0.00 0.00 0.00 1.94
2632 2872 4.976224 ACCCGCCATATACAAGTTTTTC 57.024 40.909 0.00 0.00 0.00 2.29
2633 2873 3.697542 ACCCGCCATATACAAGTTTTTCC 59.302 43.478 0.00 0.00 0.00 3.13
2634 2874 3.951680 CCCGCCATATACAAGTTTTTCCT 59.048 43.478 0.00 0.00 0.00 3.36
2635 2875 4.401202 CCCGCCATATACAAGTTTTTCCTT 59.599 41.667 0.00 0.00 0.00 3.36
2636 2876 5.449999 CCCGCCATATACAAGTTTTTCCTTC 60.450 44.000 0.00 0.00 0.00 3.46
2637 2877 5.263185 CGCCATATACAAGTTTTTCCTTCG 58.737 41.667 0.00 0.00 0.00 3.79
2638 2878 5.163794 CGCCATATACAAGTTTTTCCTTCGT 60.164 40.000 0.00 0.00 0.00 3.85
2639 2879 6.617879 GCCATATACAAGTTTTTCCTTCGTT 58.382 36.000 0.00 0.00 0.00 3.85
2640 2880 6.745907 GCCATATACAAGTTTTTCCTTCGTTC 59.254 38.462 0.00 0.00 0.00 3.95
2641 2881 7.361799 GCCATATACAAGTTTTTCCTTCGTTCT 60.362 37.037 0.00 0.00 0.00 3.01
2642 2882 8.512138 CCATATACAAGTTTTTCCTTCGTTCTT 58.488 33.333 0.00 0.00 0.00 2.52
2643 2883 9.893305 CATATACAAGTTTTTCCTTCGTTCTTT 57.107 29.630 0.00 0.00 0.00 2.52
2666 2906 5.365403 TTTTTGAGAGAGAGAGAGTCGAC 57.635 43.478 7.70 7.70 0.00 4.20
2667 2907 3.973206 TTGAGAGAGAGAGAGTCGACT 57.027 47.619 20.18 20.18 0.00 4.18
2668 2908 5.408880 TTTGAGAGAGAGAGAGTCGACTA 57.591 43.478 20.09 0.00 0.00 2.59
2669 2909 4.649088 TGAGAGAGAGAGAGTCGACTAG 57.351 50.000 20.09 0.00 0.00 2.57
2670 2910 3.383505 TGAGAGAGAGAGAGTCGACTAGG 59.616 52.174 20.09 0.00 0.00 3.02
2671 2911 3.371965 AGAGAGAGAGAGTCGACTAGGT 58.628 50.000 20.09 6.13 0.00 3.08
2672 2912 3.132289 AGAGAGAGAGAGTCGACTAGGTG 59.868 52.174 20.09 0.00 0.00 4.00
2673 2913 1.937899 GAGAGAGAGTCGACTAGGTGC 59.062 57.143 20.09 5.49 0.00 5.01
2674 2914 1.557832 AGAGAGAGTCGACTAGGTGCT 59.442 52.381 20.09 10.98 0.00 4.40
2675 2915 2.767394 AGAGAGAGTCGACTAGGTGCTA 59.233 50.000 20.09 0.00 0.00 3.49
2676 2916 3.128349 GAGAGAGTCGACTAGGTGCTAG 58.872 54.545 20.09 0.00 39.72 3.42
2678 2918 2.610374 GAGAGTCGACTAGGTGCTAGTG 59.390 54.545 20.09 0.00 45.90 2.74
2679 2919 2.236644 AGAGTCGACTAGGTGCTAGTGA 59.763 50.000 20.09 0.00 45.90 3.41
2680 2920 3.118186 AGAGTCGACTAGGTGCTAGTGAT 60.118 47.826 20.09 0.00 45.90 3.06
2681 2921 2.946329 AGTCGACTAGGTGCTAGTGATG 59.054 50.000 18.46 0.00 45.90 3.07
2682 2922 2.683867 GTCGACTAGGTGCTAGTGATGT 59.316 50.000 8.70 0.00 45.90 3.06
2683 2923 3.875727 GTCGACTAGGTGCTAGTGATGTA 59.124 47.826 8.70 0.00 45.90 2.29
2684 2924 3.875727 TCGACTAGGTGCTAGTGATGTAC 59.124 47.826 0.00 0.00 45.90 2.90
2685 2925 3.878103 CGACTAGGTGCTAGTGATGTACT 59.122 47.826 0.00 0.00 45.90 2.73
2686 2926 4.335874 CGACTAGGTGCTAGTGATGTACTT 59.664 45.833 0.00 0.00 45.90 2.24
2687 2927 5.504337 CGACTAGGTGCTAGTGATGTACTTC 60.504 48.000 0.00 1.85 45.90 3.01
2688 2928 4.645588 ACTAGGTGCTAGTGATGTACTTCC 59.354 45.833 6.32 0.00 44.47 3.46
2689 2929 3.714144 AGGTGCTAGTGATGTACTTCCT 58.286 45.455 6.32 5.85 40.89 3.36
2690 2930 4.097418 AGGTGCTAGTGATGTACTTCCTT 58.903 43.478 6.32 0.00 40.89 3.36
2691 2931 4.160626 AGGTGCTAGTGATGTACTTCCTTC 59.839 45.833 6.32 0.00 40.89 3.46
2692 2932 4.106197 GTGCTAGTGATGTACTTCCTTCG 58.894 47.826 6.32 0.00 40.89 3.79
2693 2933 3.762288 TGCTAGTGATGTACTTCCTTCGT 59.238 43.478 6.32 0.00 40.89 3.85
2694 2934 4.142447 TGCTAGTGATGTACTTCCTTCGTC 60.142 45.833 6.32 0.00 40.89 4.20
2695 2935 3.870633 AGTGATGTACTTCCTTCGTCC 57.129 47.619 6.32 0.00 35.67 4.79
2696 2936 3.162666 AGTGATGTACTTCCTTCGTCCA 58.837 45.455 6.32 0.00 35.67 4.02
2697 2937 3.193691 AGTGATGTACTTCCTTCGTCCAG 59.806 47.826 6.32 0.00 35.67 3.86
2698 2938 2.496070 TGATGTACTTCCTTCGTCCAGG 59.504 50.000 6.32 0.00 34.86 4.45
2699 2939 2.297698 TGTACTTCCTTCGTCCAGGA 57.702 50.000 0.00 0.00 41.60 3.86
2706 2946 3.887621 TCCTTCGTCCAGGAATACTTG 57.112 47.619 0.00 0.00 40.26 3.16
2707 2947 3.170717 TCCTTCGTCCAGGAATACTTGT 58.829 45.455 0.00 0.00 40.26 3.16
2708 2948 3.194968 TCCTTCGTCCAGGAATACTTGTC 59.805 47.826 0.00 0.00 40.26 3.18
2709 2949 2.933495 TCGTCCAGGAATACTTGTCG 57.067 50.000 0.00 0.00 0.00 4.35
2710 2950 1.475280 TCGTCCAGGAATACTTGTCGG 59.525 52.381 0.00 0.00 0.00 4.79
2711 2951 1.475280 CGTCCAGGAATACTTGTCGGA 59.525 52.381 0.00 0.00 0.00 4.55
2712 2952 2.479730 CGTCCAGGAATACTTGTCGGAG 60.480 54.545 0.00 0.00 0.00 4.63
2713 2953 2.758979 GTCCAGGAATACTTGTCGGAGA 59.241 50.000 0.00 0.00 0.00 3.71
2714 2954 3.194968 GTCCAGGAATACTTGTCGGAGAA 59.805 47.826 0.00 0.00 39.69 2.87
2715 2955 3.835978 TCCAGGAATACTTGTCGGAGAAA 59.164 43.478 0.00 0.00 39.69 2.52
2716 2956 4.469945 TCCAGGAATACTTGTCGGAGAAAT 59.530 41.667 0.00 0.00 39.69 2.17
2717 2957 4.572389 CCAGGAATACTTGTCGGAGAAATG 59.428 45.833 0.00 0.00 39.69 2.32
2718 2958 4.572389 CAGGAATACTTGTCGGAGAAATGG 59.428 45.833 0.00 0.00 39.69 3.16
2719 2959 4.469945 AGGAATACTTGTCGGAGAAATGGA 59.530 41.667 0.00 0.00 39.69 3.41
2720 2960 5.131142 AGGAATACTTGTCGGAGAAATGGAT 59.869 40.000 0.00 0.00 39.69 3.41
2721 2961 5.237344 GGAATACTTGTCGGAGAAATGGATG 59.763 44.000 0.00 0.00 39.69 3.51
2722 2962 3.703001 ACTTGTCGGAGAAATGGATGT 57.297 42.857 0.00 0.00 39.69 3.06
2723 2963 4.819105 ACTTGTCGGAGAAATGGATGTA 57.181 40.909 0.00 0.00 39.69 2.29
2724 2964 5.359194 ACTTGTCGGAGAAATGGATGTAT 57.641 39.130 0.00 0.00 39.69 2.29
2725 2965 5.360591 ACTTGTCGGAGAAATGGATGTATC 58.639 41.667 0.00 0.00 39.69 2.24
2726 2966 5.129485 ACTTGTCGGAGAAATGGATGTATCT 59.871 40.000 0.00 0.00 39.69 1.98
2727 2967 6.323996 ACTTGTCGGAGAAATGGATGTATCTA 59.676 38.462 0.00 0.00 39.69 1.98
2728 2968 6.332735 TGTCGGAGAAATGGATGTATCTAG 57.667 41.667 0.00 0.00 39.69 2.43
2729 2969 5.243954 TGTCGGAGAAATGGATGTATCTAGG 59.756 44.000 0.00 0.00 39.69 3.02
2730 2970 4.220821 TCGGAGAAATGGATGTATCTAGGC 59.779 45.833 0.00 0.00 0.00 3.93
2731 2971 4.499183 GGAGAAATGGATGTATCTAGGCG 58.501 47.826 0.00 0.00 0.00 5.52
2732 2972 4.021016 GGAGAAATGGATGTATCTAGGCGT 60.021 45.833 0.00 0.00 0.00 5.68
2733 2973 5.185249 GGAGAAATGGATGTATCTAGGCGTA 59.815 44.000 0.00 0.00 0.00 4.42
2734 2974 6.127310 GGAGAAATGGATGTATCTAGGCGTAT 60.127 42.308 0.00 0.00 0.00 3.06
2735 2975 7.246171 AGAAATGGATGTATCTAGGCGTATT 57.754 36.000 0.00 0.00 0.00 1.89
2736 2976 7.680730 AGAAATGGATGTATCTAGGCGTATTT 58.319 34.615 0.00 0.00 0.00 1.40
2737 2977 8.157476 AGAAATGGATGTATCTAGGCGTATTTT 58.843 33.333 0.00 0.00 0.00 1.82
2738 2978 9.431887 GAAATGGATGTATCTAGGCGTATTTTA 57.568 33.333 0.00 0.00 0.00 1.52
2739 2979 9.436957 AAATGGATGTATCTAGGCGTATTTTAG 57.563 33.333 0.00 0.00 0.00 1.85
2740 2980 7.534723 TGGATGTATCTAGGCGTATTTTAGT 57.465 36.000 0.00 0.00 0.00 2.24
2741 2981 7.959175 TGGATGTATCTAGGCGTATTTTAGTT 58.041 34.615 0.00 0.00 0.00 2.24
2742 2982 8.426489 TGGATGTATCTAGGCGTATTTTAGTTT 58.574 33.333 0.00 0.00 0.00 2.66
2743 2983 9.269453 GGATGTATCTAGGCGTATTTTAGTTTT 57.731 33.333 0.00 0.00 0.00 2.43
2775 3015 9.787532 GATTCATTTTTATTCATTTCTCCGACA 57.212 29.630 0.00 0.00 0.00 4.35
2777 3017 9.624697 TTCATTTTTATTCATTTCTCCGACAAG 57.375 29.630 0.00 0.00 0.00 3.16
2778 3018 8.792633 TCATTTTTATTCATTTCTCCGACAAGT 58.207 29.630 0.00 0.00 0.00 3.16
2785 3025 7.737972 TTCATTTCTCCGACAAGTATTTTCA 57.262 32.000 0.00 0.00 0.00 2.69
2786 3026 7.364522 TCATTTCTCCGACAAGTATTTTCAG 57.635 36.000 0.00 0.00 0.00 3.02
2787 3027 7.158697 TCATTTCTCCGACAAGTATTTTCAGA 58.841 34.615 0.00 0.00 0.00 3.27
2788 3028 6.780706 TTTCTCCGACAAGTATTTTCAGAC 57.219 37.500 0.00 0.00 0.00 3.51
2789 3029 4.482386 TCTCCGACAAGTATTTTCAGACG 58.518 43.478 0.00 0.00 0.00 4.18
2790 3030 3.581755 TCCGACAAGTATTTTCAGACGG 58.418 45.455 0.00 0.00 39.30 4.79
2791 3031 3.256383 TCCGACAAGTATTTTCAGACGGA 59.744 43.478 0.00 0.00 43.35 4.69
2792 3032 3.612860 CCGACAAGTATTTTCAGACGGAG 59.387 47.826 0.00 0.00 40.16 4.63
2793 3033 3.612860 CGACAAGTATTTTCAGACGGAGG 59.387 47.826 0.00 0.00 0.00 4.30
2794 3034 4.617530 CGACAAGTATTTTCAGACGGAGGA 60.618 45.833 0.00 0.00 0.00 3.71
2795 3035 5.223449 ACAAGTATTTTCAGACGGAGGAA 57.777 39.130 0.00 0.00 0.00 3.36
2796 3036 5.238583 ACAAGTATTTTCAGACGGAGGAAG 58.761 41.667 0.00 0.00 0.00 3.46
2797 3037 5.221661 ACAAGTATTTTCAGACGGAGGAAGT 60.222 40.000 0.00 0.00 0.00 3.01
2798 3038 6.014840 ACAAGTATTTTCAGACGGAGGAAGTA 60.015 38.462 0.00 0.00 0.00 2.24
2799 3039 5.963594 AGTATTTTCAGACGGAGGAAGTAC 58.036 41.667 0.00 0.00 0.00 2.73
2800 3040 4.884668 ATTTTCAGACGGAGGAAGTACA 57.115 40.909 0.00 0.00 0.00 2.90
2801 3041 4.675976 TTTTCAGACGGAGGAAGTACAA 57.324 40.909 0.00 0.00 0.00 2.41
2802 3042 4.675976 TTTCAGACGGAGGAAGTACAAA 57.324 40.909 0.00 0.00 0.00 2.83
2803 3043 4.884668 TTCAGACGGAGGAAGTACAAAT 57.115 40.909 0.00 0.00 0.00 2.32
2804 3044 4.451629 TCAGACGGAGGAAGTACAAATC 57.548 45.455 0.00 0.00 0.00 2.17
2805 3045 4.087182 TCAGACGGAGGAAGTACAAATCT 58.913 43.478 0.00 0.00 0.00 2.40
2806 3046 5.258841 TCAGACGGAGGAAGTACAAATCTA 58.741 41.667 0.00 0.00 0.00 1.98
2807 3047 5.357314 TCAGACGGAGGAAGTACAAATCTAG 59.643 44.000 0.00 0.00 0.00 2.43
2808 3048 4.645588 AGACGGAGGAAGTACAAATCTAGG 59.354 45.833 0.00 0.00 0.00 3.02
2809 3049 4.607239 ACGGAGGAAGTACAAATCTAGGA 58.393 43.478 0.00 0.00 0.00 2.94
2810 3050 4.645588 ACGGAGGAAGTACAAATCTAGGAG 59.354 45.833 0.00 0.00 0.00 3.69
2811 3051 4.645588 CGGAGGAAGTACAAATCTAGGAGT 59.354 45.833 0.00 0.00 0.00 3.85
2812 3052 5.127356 CGGAGGAAGTACAAATCTAGGAGTT 59.873 44.000 0.00 0.00 0.00 3.01
2813 3053 6.351117 CGGAGGAAGTACAAATCTAGGAGTTT 60.351 42.308 0.00 0.00 0.00 2.66
2814 3054 7.042950 GGAGGAAGTACAAATCTAGGAGTTTC 58.957 42.308 0.00 0.00 0.00 2.78
2815 3055 6.631962 AGGAAGTACAAATCTAGGAGTTTCG 58.368 40.000 0.00 0.00 0.00 3.46
2816 3056 6.210984 AGGAAGTACAAATCTAGGAGTTTCGT 59.789 38.462 0.00 0.00 0.00 3.85
2817 3057 6.310711 GGAAGTACAAATCTAGGAGTTTCGTG 59.689 42.308 0.00 0.00 0.00 4.35
2818 3058 6.342338 AGTACAAATCTAGGAGTTTCGTGT 57.658 37.500 0.00 0.00 0.00 4.49
2819 3059 7.458409 AGTACAAATCTAGGAGTTTCGTGTA 57.542 36.000 0.00 0.00 0.00 2.90
2820 3060 7.889469 AGTACAAATCTAGGAGTTTCGTGTAA 58.111 34.615 0.00 0.00 0.00 2.41
2821 3061 8.362639 AGTACAAATCTAGGAGTTTCGTGTAAA 58.637 33.333 0.00 0.00 0.00 2.01
2822 3062 9.148104 GTACAAATCTAGGAGTTTCGTGTAAAT 57.852 33.333 0.00 0.00 0.00 1.40
2823 3063 8.617290 ACAAATCTAGGAGTTTCGTGTAAATT 57.383 30.769 0.00 0.00 0.00 1.82
2824 3064 8.504005 ACAAATCTAGGAGTTTCGTGTAAATTG 58.496 33.333 0.00 0.00 0.00 2.32
2825 3065 8.717821 CAAATCTAGGAGTTTCGTGTAAATTGA 58.282 33.333 0.00 0.00 0.00 2.57
2826 3066 8.480643 AATCTAGGAGTTTCGTGTAAATTGAG 57.519 34.615 0.00 0.00 0.00 3.02
2827 3067 5.867716 TCTAGGAGTTTCGTGTAAATTGAGC 59.132 40.000 0.00 0.00 0.00 4.26
2828 3068 3.751698 AGGAGTTTCGTGTAAATTGAGCC 59.248 43.478 0.00 0.00 0.00 4.70
2829 3069 3.500680 GGAGTTTCGTGTAAATTGAGCCA 59.499 43.478 0.00 0.00 0.00 4.75
2830 3070 4.156008 GGAGTTTCGTGTAAATTGAGCCAT 59.844 41.667 0.00 0.00 0.00 4.40
2831 3071 5.335661 GGAGTTTCGTGTAAATTGAGCCATT 60.336 40.000 0.00 0.00 0.00 3.16
2832 3072 6.084326 AGTTTCGTGTAAATTGAGCCATTT 57.916 33.333 0.00 0.00 0.00 2.32
2833 3073 6.512297 AGTTTCGTGTAAATTGAGCCATTTT 58.488 32.000 0.00 0.00 0.00 1.82
2834 3074 6.420604 AGTTTCGTGTAAATTGAGCCATTTTG 59.579 34.615 0.00 0.00 0.00 2.44
2835 3075 5.446143 TCGTGTAAATTGAGCCATTTTGT 57.554 34.783 0.00 0.00 0.00 2.83
2836 3076 6.561737 TCGTGTAAATTGAGCCATTTTGTA 57.438 33.333 0.00 0.00 0.00 2.41
2837 3077 6.375377 TCGTGTAAATTGAGCCATTTTGTAC 58.625 36.000 0.00 0.00 0.00 2.90
2838 3078 6.205853 TCGTGTAAATTGAGCCATTTTGTACT 59.794 34.615 0.00 0.00 0.00 2.73
2839 3079 6.861055 CGTGTAAATTGAGCCATTTTGTACTT 59.139 34.615 0.00 0.00 0.00 2.24
2840 3080 7.381139 CGTGTAAATTGAGCCATTTTGTACTTT 59.619 33.333 0.00 0.00 0.00 2.66
2841 3081 9.040939 GTGTAAATTGAGCCATTTTGTACTTTT 57.959 29.630 0.00 0.00 0.00 2.27
2849 3089 9.237187 TGAGCCATTTTGTACTTTTATACATCA 57.763 29.630 0.00 0.00 35.04 3.07
2852 3092 9.248291 GCCATTTTGTACTTTTATACATCATGG 57.752 33.333 14.20 14.20 42.04 3.66
2853 3093 9.748708 CCATTTTGTACTTTTATACATCATGGG 57.251 33.333 12.20 0.00 39.13 4.00
2857 3097 7.780008 TGTACTTTTATACATCATGGGTTCG 57.220 36.000 0.00 0.00 29.97 3.95
2858 3098 7.332557 TGTACTTTTATACATCATGGGTTCGT 58.667 34.615 0.00 0.00 29.97 3.85
2859 3099 6.677781 ACTTTTATACATCATGGGTTCGTG 57.322 37.500 0.00 0.00 0.00 4.35
2860 3100 6.177610 ACTTTTATACATCATGGGTTCGTGT 58.822 36.000 0.00 0.00 0.00 4.49
2861 3101 6.093495 ACTTTTATACATCATGGGTTCGTGTG 59.907 38.462 0.00 0.00 0.00 3.82
2862 3102 1.732941 TACATCATGGGTTCGTGTGC 58.267 50.000 0.00 0.00 0.00 4.57
2863 3103 0.960364 ACATCATGGGTTCGTGTGCC 60.960 55.000 0.00 0.00 0.00 5.01
2864 3104 0.959867 CATCATGGGTTCGTGTGCCA 60.960 55.000 0.00 0.00 0.00 4.92
2865 3105 0.677731 ATCATGGGTTCGTGTGCCAG 60.678 55.000 0.00 0.00 0.00 4.85
2866 3106 1.600636 CATGGGTTCGTGTGCCAGT 60.601 57.895 0.00 0.00 0.00 4.00
2867 3107 0.321210 CATGGGTTCGTGTGCCAGTA 60.321 55.000 0.00 0.00 0.00 2.74
2868 3108 0.618458 ATGGGTTCGTGTGCCAGTAT 59.382 50.000 0.00 0.00 0.00 2.12
2869 3109 0.398696 TGGGTTCGTGTGCCAGTATT 59.601 50.000 0.00 0.00 0.00 1.89
2870 3110 1.202830 TGGGTTCGTGTGCCAGTATTT 60.203 47.619 0.00 0.00 0.00 1.40
2871 3111 1.467342 GGGTTCGTGTGCCAGTATTTC 59.533 52.381 0.00 0.00 0.00 2.17
2872 3112 1.467342 GGTTCGTGTGCCAGTATTTCC 59.533 52.381 0.00 0.00 0.00 3.13
2873 3113 1.467342 GTTCGTGTGCCAGTATTTCCC 59.533 52.381 0.00 0.00 0.00 3.97
2874 3114 0.035820 TCGTGTGCCAGTATTTCCCC 60.036 55.000 0.00 0.00 0.00 4.81
2875 3115 0.322098 CGTGTGCCAGTATTTCCCCA 60.322 55.000 0.00 0.00 0.00 4.96
2876 3116 1.173913 GTGTGCCAGTATTTCCCCAC 58.826 55.000 0.00 0.00 0.00 4.61
2877 3117 0.774276 TGTGCCAGTATTTCCCCACA 59.226 50.000 0.00 0.00 0.00 4.17
2878 3118 1.173913 GTGCCAGTATTTCCCCACAC 58.826 55.000 0.00 0.00 0.00 3.82
2879 3119 0.774276 TGCCAGTATTTCCCCACACA 59.226 50.000 0.00 0.00 0.00 3.72
2880 3120 1.173913 GCCAGTATTTCCCCACACAC 58.826 55.000 0.00 0.00 0.00 3.82
2881 3121 1.546773 GCCAGTATTTCCCCACACACA 60.547 52.381 0.00 0.00 0.00 3.72
2882 3122 2.159382 CCAGTATTTCCCCACACACAC 58.841 52.381 0.00 0.00 0.00 3.82
2883 3123 2.488167 CCAGTATTTCCCCACACACACA 60.488 50.000 0.00 0.00 0.00 3.72
2884 3124 2.813754 CAGTATTTCCCCACACACACAG 59.186 50.000 0.00 0.00 0.00 3.66
2885 3125 2.708861 AGTATTTCCCCACACACACAGA 59.291 45.455 0.00 0.00 0.00 3.41
2886 3126 2.276732 ATTTCCCCACACACACAGAG 57.723 50.000 0.00 0.00 0.00 3.35
2887 3127 0.465460 TTTCCCCACACACACAGAGC 60.465 55.000 0.00 0.00 0.00 4.09
2888 3128 2.658679 TTCCCCACACACACAGAGCG 62.659 60.000 0.00 0.00 0.00 5.03
2889 3129 3.349006 CCCACACACACAGAGCGC 61.349 66.667 0.00 0.00 0.00 5.92
2890 3130 3.705638 CCACACACACAGAGCGCG 61.706 66.667 0.00 0.00 0.00 6.86
2891 3131 4.360027 CACACACACAGAGCGCGC 62.360 66.667 26.66 26.66 0.00 6.86
2907 3147 3.568743 GCGCGCGAGAGAGAGAGA 61.569 66.667 37.18 0.00 31.43 3.10
2908 3148 2.625906 CGCGCGAGAGAGAGAGAG 59.374 66.667 28.94 0.00 31.43 3.20
2909 3149 1.880796 CGCGCGAGAGAGAGAGAGA 60.881 63.158 28.94 0.00 31.43 3.10
2910 3150 1.821241 CGCGCGAGAGAGAGAGAGAG 61.821 65.000 28.94 0.00 31.43 3.20
2911 3151 0.529773 GCGCGAGAGAGAGAGAGAGA 60.530 60.000 12.10 0.00 0.00 3.10
2912 3152 1.491670 CGCGAGAGAGAGAGAGAGAG 58.508 60.000 0.00 0.00 0.00 3.20
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
61 63 4.019312 TGTGATGCAGAGGCGGCA 62.019 61.111 13.08 0.00 46.66 5.69
70 72 4.408821 GGCGGACCCTGTGATGCA 62.409 66.667 0.00 0.00 0.00 3.96
107 109 2.439156 GGCCCAGCACCACAGATC 60.439 66.667 0.00 0.00 0.00 2.75
131 133 2.522638 GCCGGTAAAGGTCGCGATG 61.523 63.158 14.06 0.00 0.00 3.84
132 134 2.202837 GCCGGTAAAGGTCGCGAT 60.203 61.111 14.06 0.00 0.00 4.58
133 135 3.636313 CTGCCGGTAAAGGTCGCGA 62.636 63.158 3.71 3.71 0.00 5.87
134 136 3.186047 CTGCCGGTAAAGGTCGCG 61.186 66.667 1.90 0.00 0.00 5.87
135 137 3.497031 GCTGCCGGTAAAGGTCGC 61.497 66.667 1.90 0.00 0.00 5.19
136 138 2.047655 TGCTGCCGGTAAAGGTCG 60.048 61.111 1.90 0.00 0.00 4.79
138 140 2.359975 GCTGCTGCCGGTAAAGGT 60.360 61.111 1.90 0.00 0.00 3.50
158 160 3.329889 TTGCTCCATCCCCAGCGT 61.330 61.111 0.00 0.00 38.59 5.07
159 161 2.825836 GTTGCTCCATCCCCAGCG 60.826 66.667 0.00 0.00 38.59 5.18
251 254 6.105397 AGAAAAACATCAACATCATGGCTT 57.895 33.333 0.00 0.00 0.00 4.35
255 258 9.642327 TTTATGGAGAAAAACATCAACATCATG 57.358 29.630 0.00 0.00 0.00 3.07
275 278 6.726035 CGTTAATAAACACGCCATTTATGG 57.274 37.500 4.34 4.34 42.18 2.74
285 288 5.279751 GCTACTTGTTGCGTTAATAAACACG 59.720 40.000 1.41 0.00 39.49 4.49
288 291 7.018826 TGATGCTACTTGTTGCGTTAATAAAC 58.981 34.615 3.74 0.00 0.00 2.01
315 318 3.736252 CGCTCAATTCGATTCGTATCCTT 59.264 43.478 5.89 0.00 0.00 3.36
357 360 0.379669 GCTGTGTGTATGCATCCTGC 59.620 55.000 0.19 0.00 45.29 4.85
358 361 1.019673 GGCTGTGTGTATGCATCCTG 58.980 55.000 0.19 0.00 0.00 3.86
385 388 8.767478 TTATTTCCTTTCTACGTTAGACTTGG 57.233 34.615 0.00 0.00 33.84 3.61
396 399 8.553696 TGACTTGTCGTTTTATTTCCTTTCTAC 58.446 33.333 0.00 0.00 0.00 2.59
404 407 4.909880 GGTGCTGACTTGTCGTTTTATTTC 59.090 41.667 0.00 0.00 0.00 2.17
413 416 2.148916 TTACTGGTGCTGACTTGTCG 57.851 50.000 0.00 0.00 0.00 4.35
419 422 5.689383 TTTTCATCTTTACTGGTGCTGAC 57.311 39.130 0.00 0.00 0.00 3.51
446 449 1.112113 AACATCTCCGGCTATGTCGT 58.888 50.000 18.29 5.07 35.30 4.34
447 450 1.067060 TCAACATCTCCGGCTATGTCG 59.933 52.381 18.29 10.31 35.30 4.35
494 497 0.957395 CAAGGACGGCTCATTGCACT 60.957 55.000 0.00 0.00 45.15 4.40
496 499 0.955428 GACAAGGACGGCTCATTGCA 60.955 55.000 9.97 0.00 41.08 4.08
588 596 1.037493 CCTTCCGTGTGATCCCGATA 58.963 55.000 0.00 0.00 0.00 2.92
604 612 3.066900 CCGTCATCTATCTGTTCGTCCTT 59.933 47.826 0.00 0.00 0.00 3.36
640 648 9.672086 TGTGGTTTATTTTCATTTTCTTACGAG 57.328 29.630 0.00 0.00 0.00 4.18
643 651 8.708742 GGCTGTGGTTTATTTTCATTTTCTTAC 58.291 33.333 0.00 0.00 0.00 2.34
645 653 6.710295 GGGCTGTGGTTTATTTTCATTTTCTT 59.290 34.615 0.00 0.00 0.00 2.52
657 665 4.093011 TGCAATTAAGGGCTGTGGTTTAT 58.907 39.130 3.22 0.00 0.00 1.40
697 706 4.164796 AGAGATGAATGTGAATGGCTACCA 59.835 41.667 0.00 0.00 38.19 3.25
740 785 3.068691 CCAAGGACTCTCCGGCGA 61.069 66.667 9.30 0.00 42.75 5.54
744 799 2.074729 ATAGACCCAAGGACTCTCCG 57.925 55.000 0.00 0.00 42.75 4.63
794 853 1.353394 GGGTAGGGTTGGAGATGGGG 61.353 65.000 0.00 0.00 0.00 4.96
795 854 1.353394 GGGGTAGGGTTGGAGATGGG 61.353 65.000 0.00 0.00 0.00 4.00
796 855 1.696097 CGGGGTAGGGTTGGAGATGG 61.696 65.000 0.00 0.00 0.00 3.51
797 856 0.981277 ACGGGGTAGGGTTGGAGATG 60.981 60.000 0.00 0.00 0.00 2.90
798 857 0.981277 CACGGGGTAGGGTTGGAGAT 60.981 60.000 0.00 0.00 0.00 2.75
817 883 1.634702 CAGCTTTCGTGAGGTAGAGC 58.365 55.000 0.00 0.00 0.00 4.09
932 998 0.906775 GAAAGGTCCGGGGTGTATCA 59.093 55.000 0.00 0.00 0.00 2.15
933 999 1.138464 GAGAAAGGTCCGGGGTGTATC 59.862 57.143 0.00 0.00 0.00 2.24
936 1002 2.580601 CGAGAAAGGTCCGGGGTGT 61.581 63.158 0.00 0.00 0.00 4.16
986 1069 1.153449 TCCATGGAAGCTTACGCCG 60.153 57.895 13.46 0.00 36.60 6.46
987 1070 1.440145 GCTCCATGGAAGCTTACGCC 61.440 60.000 17.00 0.00 36.60 5.68
990 1073 1.440145 GCGGCTCCATGGAAGCTTAC 61.440 60.000 25.57 0.11 0.00 2.34
991 1074 1.153168 GCGGCTCCATGGAAGCTTA 60.153 57.895 25.57 2.82 0.00 3.09
1145 1271 1.196808 GATCGATCGACAGGAGAGCTC 59.803 57.143 22.06 5.27 0.00 4.09
1155 1281 1.883275 AGGTGAGATGGATCGATCGAC 59.117 52.381 22.06 14.00 0.00 4.20
1171 1303 1.663695 AACAAAGACACGGTCAGGTG 58.336 50.000 6.78 4.31 43.54 4.00
1177 1309 3.537580 ACACACATAACAAAGACACGGT 58.462 40.909 0.00 0.00 0.00 4.83
1178 1310 4.986034 TCTACACACATAACAAAGACACGG 59.014 41.667 0.00 0.00 0.00 4.94
1184 1316 7.595311 TGCAGTATCTACACACATAACAAAG 57.405 36.000 0.00 0.00 0.00 2.77
1297 1429 1.868109 GCCTTCTTGTTTTTCACCGGC 60.868 52.381 0.00 0.00 0.00 6.13
1304 1442 3.488553 CGTTTCTCCGCCTTCTTGTTTTT 60.489 43.478 0.00 0.00 0.00 1.94
1305 1443 2.032924 CGTTTCTCCGCCTTCTTGTTTT 59.967 45.455 0.00 0.00 0.00 2.43
1306 1444 1.602377 CGTTTCTCCGCCTTCTTGTTT 59.398 47.619 0.00 0.00 0.00 2.83
1308 1446 0.602905 CCGTTTCTCCGCCTTCTTGT 60.603 55.000 0.00 0.00 0.00 3.16
1397 1535 1.303074 TCGACCTCGTAGCAGTGGT 60.303 57.895 0.00 0.00 40.31 4.16
1414 1552 3.206211 CTCCGCAGCCGATCTCCTC 62.206 68.421 0.00 0.00 36.29 3.71
1519 1657 1.070786 GACCTTGGGCTTCGTGTCA 59.929 57.895 0.00 0.00 0.00 3.58
1524 1662 2.809601 CGTCGACCTTGGGCTTCG 60.810 66.667 10.58 0.00 0.00 3.79
1585 1723 1.941812 CTTCTTGTCGCCGCTGTTT 59.058 52.632 0.00 0.00 0.00 2.83
1594 1732 1.201647 TCGACCTTAGGCTTCTTGTCG 59.798 52.381 17.03 17.03 34.85 4.35
1606 1744 2.693762 CGGCCACTCGTCGACCTTA 61.694 63.158 10.58 0.00 0.00 2.69
1971 2191 9.353353 CAAACGATATTTACATACAATGTCGAC 57.647 33.333 9.11 9.11 43.87 4.20
2017 2254 2.563179 CTCTCTCCCCAAAAAGAGACGA 59.437 50.000 0.00 0.00 42.31 4.20
2019 2256 3.615351 CGACTCTCTCCCCAAAAAGAGAC 60.615 52.174 5.31 0.00 42.31 3.36
2029 2266 0.814812 CGGTAGTCGACTCTCTCCCC 60.815 65.000 23.89 12.01 42.43 4.81
2084 2321 5.585820 TCTATGCACGTCAACTGGTATAA 57.414 39.130 0.00 0.00 0.00 0.98
2107 2347 0.938713 CGTAAAGTCAAACCGCACCA 59.061 50.000 0.00 0.00 0.00 4.17
2183 2423 1.751351 CTCCAGTCTATGCTTCACGGA 59.249 52.381 0.00 0.00 0.00 4.69
2198 2438 1.513158 CGCTCACTACCACCTCCAG 59.487 63.158 0.00 0.00 0.00 3.86
2208 2448 0.736636 CGACATACCACCGCTCACTA 59.263 55.000 0.00 0.00 0.00 2.74
2236 2476 1.153667 CTCGTCTCTGGAAGCAGGC 60.154 63.158 0.00 0.00 0.00 4.85
2238 2478 0.884514 TGACTCGTCTCTGGAAGCAG 59.115 55.000 0.00 0.00 0.00 4.24
2239 2479 1.328279 TTGACTCGTCTCTGGAAGCA 58.672 50.000 0.00 0.00 0.00 3.91
2240 2480 2.266554 CATTGACTCGTCTCTGGAAGC 58.733 52.381 0.00 0.00 0.00 3.86
2241 2481 2.266554 GCATTGACTCGTCTCTGGAAG 58.733 52.381 0.00 0.00 0.00 3.46
2242 2482 1.618343 TGCATTGACTCGTCTCTGGAA 59.382 47.619 0.00 0.00 0.00 3.53
2251 2491 3.873361 ACCATGACTATTGCATTGACTCG 59.127 43.478 0.00 0.00 0.00 4.18
2258 2498 2.158914 TCGCAGACCATGACTATTGCAT 60.159 45.455 0.00 0.00 0.00 3.96
2264 2504 0.172578 CCGTTCGCAGACCATGACTA 59.827 55.000 0.00 0.00 34.32 2.59
2290 2530 3.635373 CCACCTATAGTCTAGGTTGCGAA 59.365 47.826 4.51 0.00 45.06 4.70
2298 2538 3.757493 CGGCCTAACCACCTATAGTCTAG 59.243 52.174 0.00 0.00 39.03 2.43
2303 2543 1.270147 GCACGGCCTAACCACCTATAG 60.270 57.143 0.00 0.00 39.03 1.31
2305 2545 1.525442 GCACGGCCTAACCACCTAT 59.475 57.895 0.00 0.00 39.03 2.57
2319 2559 1.204062 CAAGTTACAGTGCCGCACG 59.796 57.895 17.64 14.44 39.64 5.34
2329 2569 1.411246 ACCACGCACTCTCAAGTTACA 59.589 47.619 0.00 0.00 31.71 2.41
2344 2584 1.518572 GCTCCGACATACCACCACG 60.519 63.158 0.00 0.00 0.00 4.94
2361 2601 0.324943 TCACTTTCTAGGGCCACTGC 59.675 55.000 6.18 0.00 0.00 4.40
2363 2603 1.280457 CCTCACTTTCTAGGGCCACT 58.720 55.000 6.18 1.30 0.00 4.00
2365 2605 1.276622 GACCTCACTTTCTAGGGCCA 58.723 55.000 6.18 0.00 34.51 5.36
2372 2612 1.275573 GGCTTACCGACCTCACTTTCT 59.724 52.381 0.00 0.00 0.00 2.52
2373 2613 1.723220 GGCTTACCGACCTCACTTTC 58.277 55.000 0.00 0.00 0.00 2.62
2395 2635 1.301677 CTCGACCTTGGGCTTCTTGC 61.302 60.000 0.00 0.00 41.94 4.01
2403 2643 0.533032 GACTTCTCCTCGACCTTGGG 59.467 60.000 0.00 0.00 0.00 4.12
2414 2654 2.817396 GGCAGCGCTGACTTCTCC 60.817 66.667 40.21 25.70 35.21 3.71
2415 2655 2.817396 GGGCAGCGCTGACTTCTC 60.817 66.667 40.01 21.85 39.02 2.87
2452 2692 1.065345 TGTCGTTGTTGTTCCCCTTCA 60.065 47.619 0.00 0.00 0.00 3.02
2464 2704 1.148310 CATCGGCTTCTTGTCGTTGT 58.852 50.000 0.00 0.00 45.15 3.32
2473 2713 0.104855 TATCGCTTGCATCGGCTTCT 59.895 50.000 8.68 0.00 41.91 2.85
2479 2719 2.708514 CCAACTTTATCGCTTGCATCG 58.291 47.619 2.85 2.85 0.00 3.84
2480 2720 2.159393 TGCCAACTTTATCGCTTGCATC 60.159 45.455 0.00 0.00 0.00 3.91
2481 2721 1.818060 TGCCAACTTTATCGCTTGCAT 59.182 42.857 0.00 0.00 0.00 3.96
2482 2722 1.068610 GTGCCAACTTTATCGCTTGCA 60.069 47.619 0.00 0.00 0.00 4.08
2483 2723 1.617740 GTGCCAACTTTATCGCTTGC 58.382 50.000 0.00 0.00 0.00 4.01
2484 2724 1.463056 TCGTGCCAACTTTATCGCTTG 59.537 47.619 0.00 0.00 0.00 4.01
2485 2725 1.463444 GTCGTGCCAACTTTATCGCTT 59.537 47.619 0.00 0.00 0.00 4.68
2486 2726 1.076332 GTCGTGCCAACTTTATCGCT 58.924 50.000 0.00 0.00 0.00 4.93
2487 2727 0.096454 GGTCGTGCCAACTTTATCGC 59.904 55.000 0.00 0.00 37.17 4.58
2488 2728 1.434555 TGGTCGTGCCAACTTTATCG 58.565 50.000 0.00 0.00 45.94 2.92
2497 2737 3.000819 CCCTACCTGGTCGTGCCA 61.001 66.667 0.63 1.94 46.95 4.92
2498 2738 3.001406 ACCCTACCTGGTCGTGCC 61.001 66.667 0.63 0.00 31.15 5.01
2499 2739 2.577593 GACCCTACCTGGTCGTGC 59.422 66.667 0.63 0.00 44.98 5.34
2504 2744 0.192566 TCACCTTGACCCTACCTGGT 59.807 55.000 4.05 4.05 42.79 4.00
2505 2745 0.905357 CTCACCTTGACCCTACCTGG 59.095 60.000 0.00 0.00 0.00 4.45
2506 2746 0.905357 CCTCACCTTGACCCTACCTG 59.095 60.000 0.00 0.00 0.00 4.00
2507 2747 0.790993 TCCTCACCTTGACCCTACCT 59.209 55.000 0.00 0.00 0.00 3.08
2508 2748 1.196012 CTCCTCACCTTGACCCTACC 58.804 60.000 0.00 0.00 0.00 3.18
2509 2749 1.196012 CCTCCTCACCTTGACCCTAC 58.804 60.000 0.00 0.00 0.00 3.18
2510 2750 0.790993 ACCTCCTCACCTTGACCCTA 59.209 55.000 0.00 0.00 0.00 3.53
2511 2751 0.838122 CACCTCCTCACCTTGACCCT 60.838 60.000 0.00 0.00 0.00 4.34
2512 2752 1.679898 CACCTCCTCACCTTGACCC 59.320 63.158 0.00 0.00 0.00 4.46
2513 2753 1.003233 GCACCTCCTCACCTTGACC 60.003 63.158 0.00 0.00 0.00 4.02
2514 2754 0.108585 TTGCACCTCCTCACCTTGAC 59.891 55.000 0.00 0.00 0.00 3.18
2515 2755 0.397941 CTTGCACCTCCTCACCTTGA 59.602 55.000 0.00 0.00 0.00 3.02
2516 2756 1.239968 GCTTGCACCTCCTCACCTTG 61.240 60.000 0.00 0.00 0.00 3.61
2517 2757 1.073897 GCTTGCACCTCCTCACCTT 59.926 57.895 0.00 0.00 0.00 3.50
2518 2758 1.835927 GAGCTTGCACCTCCTCACCT 61.836 60.000 2.78 0.00 0.00 4.00
2519 2759 1.376553 GAGCTTGCACCTCCTCACC 60.377 63.158 2.78 0.00 0.00 4.02
2520 2760 1.376553 GGAGCTTGCACCTCCTCAC 60.377 63.158 20.33 0.23 44.40 3.51
2521 2761 3.072476 GGAGCTTGCACCTCCTCA 58.928 61.111 20.33 0.00 44.40 3.86
2525 2765 0.676151 CTCCAAGGAGCTTGCACCTC 60.676 60.000 11.71 5.23 39.85 3.85
2526 2766 1.377994 CTCCAAGGAGCTTGCACCT 59.622 57.895 5.78 5.78 39.85 4.00
2527 2767 1.676967 CCTCCAAGGAGCTTGCACC 60.677 63.158 10.68 0.78 39.85 5.01
2528 2768 1.073897 ACCTCCAAGGAGCTTGCAC 59.926 57.895 10.68 0.00 39.85 4.57
2529 2769 1.073722 CACCTCCAAGGAGCTTGCA 59.926 57.895 10.68 0.00 39.85 4.08
2530 2770 1.073897 ACACCTCCAAGGAGCTTGC 59.926 57.895 10.68 0.00 39.85 4.01
2531 2771 0.397941 TCACACCTCCAAGGAGCTTG 59.602 55.000 10.68 11.52 37.67 4.01
2532 2772 0.689623 CTCACACCTCCAAGGAGCTT 59.310 55.000 10.68 0.00 37.67 3.74
2533 2773 0.178921 TCTCACACCTCCAAGGAGCT 60.179 55.000 10.68 0.00 37.67 4.09
2534 2774 0.687354 TTCTCACACCTCCAAGGAGC 59.313 55.000 10.68 0.00 37.67 4.70
2535 2775 4.826274 TTATTCTCACACCTCCAAGGAG 57.174 45.455 9.20 9.20 37.67 3.69
2536 2776 5.514834 CCTTTTATTCTCACACCTCCAAGGA 60.515 44.000 0.00 0.00 37.67 3.36
2537 2777 4.702131 CCTTTTATTCTCACACCTCCAAGG 59.298 45.833 0.00 0.00 42.49 3.61
2538 2778 4.702131 CCCTTTTATTCTCACACCTCCAAG 59.298 45.833 0.00 0.00 0.00 3.61
2539 2779 4.508405 CCCCTTTTATTCTCACACCTCCAA 60.508 45.833 0.00 0.00 0.00 3.53
2540 2780 3.010138 CCCCTTTTATTCTCACACCTCCA 59.990 47.826 0.00 0.00 0.00 3.86
2541 2781 3.265995 TCCCCTTTTATTCTCACACCTCC 59.734 47.826 0.00 0.00 0.00 4.30
2542 2782 4.569719 TCCCCTTTTATTCTCACACCTC 57.430 45.455 0.00 0.00 0.00 3.85
2543 2783 4.811063 GCTTCCCCTTTTATTCTCACACCT 60.811 45.833 0.00 0.00 0.00 4.00
2544 2784 3.444034 GCTTCCCCTTTTATTCTCACACC 59.556 47.826 0.00 0.00 0.00 4.16
2545 2785 4.079253 TGCTTCCCCTTTTATTCTCACAC 58.921 43.478 0.00 0.00 0.00 3.82
2546 2786 4.335416 CTGCTTCCCCTTTTATTCTCACA 58.665 43.478 0.00 0.00 0.00 3.58
2547 2787 3.129462 GCTGCTTCCCCTTTTATTCTCAC 59.871 47.826 0.00 0.00 0.00 3.51
2548 2788 3.010584 AGCTGCTTCCCCTTTTATTCTCA 59.989 43.478 0.00 0.00 0.00 3.27
2549 2789 3.625853 AGCTGCTTCCCCTTTTATTCTC 58.374 45.455 0.00 0.00 0.00 2.87
2550 2790 3.746792 AGCTGCTTCCCCTTTTATTCT 57.253 42.857 0.00 0.00 0.00 2.40
2551 2791 3.316588 GCTAGCTGCTTCCCCTTTTATTC 59.683 47.826 7.79 0.00 38.95 1.75
2552 2792 3.291584 GCTAGCTGCTTCCCCTTTTATT 58.708 45.455 7.79 0.00 38.95 1.40
2553 2793 2.423517 GGCTAGCTGCTTCCCCTTTTAT 60.424 50.000 15.72 0.00 42.39 1.40
2554 2794 1.064685 GGCTAGCTGCTTCCCCTTTTA 60.065 52.381 15.72 0.00 42.39 1.52
2555 2795 0.323816 GGCTAGCTGCTTCCCCTTTT 60.324 55.000 15.72 0.00 42.39 2.27
2556 2796 1.304617 GGCTAGCTGCTTCCCCTTT 59.695 57.895 15.72 0.00 42.39 3.11
2557 2797 1.925455 TGGCTAGCTGCTTCCCCTT 60.925 57.895 15.72 0.00 42.39 3.95
2558 2798 2.285668 TGGCTAGCTGCTTCCCCT 60.286 61.111 15.72 0.00 42.39 4.79
2559 2799 2.124529 GTGGCTAGCTGCTTCCCC 60.125 66.667 15.72 6.72 42.39 4.81
2560 2800 2.124529 GGTGGCTAGCTGCTTCCC 60.125 66.667 15.72 9.40 42.39 3.97
2561 2801 0.817229 GATGGTGGCTAGCTGCTTCC 60.817 60.000 15.72 10.53 42.39 3.46
2562 2802 1.156645 CGATGGTGGCTAGCTGCTTC 61.157 60.000 15.72 0.00 42.39 3.86
2563 2803 1.153289 CGATGGTGGCTAGCTGCTT 60.153 57.895 15.72 0.00 42.39 3.91
2564 2804 2.060383 TCGATGGTGGCTAGCTGCT 61.060 57.895 15.72 7.57 42.39 4.24
2565 2805 1.884926 GTCGATGGTGGCTAGCTGC 60.885 63.158 15.72 7.58 41.94 5.25
2566 2806 0.807667 GTGTCGATGGTGGCTAGCTG 60.808 60.000 15.72 0.00 0.00 4.24
2567 2807 1.257750 TGTGTCGATGGTGGCTAGCT 61.258 55.000 15.72 0.00 0.00 3.32
2568 2808 0.179073 ATGTGTCGATGGTGGCTAGC 60.179 55.000 6.04 6.04 0.00 3.42
2569 2809 1.134699 ACATGTGTCGATGGTGGCTAG 60.135 52.381 0.00 0.00 0.00 3.42
2570 2810 0.901827 ACATGTGTCGATGGTGGCTA 59.098 50.000 0.00 0.00 0.00 3.93
2571 2811 0.391661 GACATGTGTCGATGGTGGCT 60.392 55.000 1.15 0.00 35.12 4.75
2572 2812 2.089854 GACATGTGTCGATGGTGGC 58.910 57.895 1.15 0.00 35.12 5.01
2582 2822 9.710900 ACAATATATACATTCATCGACATGTGT 57.289 29.630 1.15 11.07 35.24 3.72
2589 2829 9.361315 CGGGTAAACAATATATACATTCATCGA 57.639 33.333 0.00 0.00 0.00 3.59
2590 2830 8.114290 GCGGGTAAACAATATATACATTCATCG 58.886 37.037 0.00 0.00 0.00 3.84
2591 2831 8.395633 GGCGGGTAAACAATATATACATTCATC 58.604 37.037 0.00 0.00 0.00 2.92
2592 2832 7.885922 TGGCGGGTAAACAATATATACATTCAT 59.114 33.333 0.00 0.00 0.00 2.57
2593 2833 7.225011 TGGCGGGTAAACAATATATACATTCA 58.775 34.615 0.00 0.00 0.00 2.57
2594 2834 7.675962 TGGCGGGTAAACAATATATACATTC 57.324 36.000 0.00 0.00 0.00 2.67
2595 2835 9.914834 ATATGGCGGGTAAACAATATATACATT 57.085 29.630 0.00 0.00 0.00 2.71
2597 2837 9.820725 GTATATGGCGGGTAAACAATATATACA 57.179 33.333 0.00 0.00 34.91 2.29
2598 2838 9.820725 TGTATATGGCGGGTAAACAATATATAC 57.179 33.333 0.00 0.00 35.16 1.47
2600 2840 9.391006 CTTGTATATGGCGGGTAAACAATATAT 57.609 33.333 0.00 0.00 0.00 0.86
2601 2841 8.377034 ACTTGTATATGGCGGGTAAACAATATA 58.623 33.333 0.00 0.00 0.00 0.86
2602 2842 7.228590 ACTTGTATATGGCGGGTAAACAATAT 58.771 34.615 0.00 0.00 0.00 1.28
2603 2843 6.593807 ACTTGTATATGGCGGGTAAACAATA 58.406 36.000 0.00 0.00 0.00 1.90
2604 2844 5.442391 ACTTGTATATGGCGGGTAAACAAT 58.558 37.500 0.00 0.00 0.00 2.71
2605 2845 4.846040 ACTTGTATATGGCGGGTAAACAA 58.154 39.130 0.00 0.00 0.00 2.83
2606 2846 4.490899 ACTTGTATATGGCGGGTAAACA 57.509 40.909 0.00 0.00 0.00 2.83
2607 2847 5.823209 AAACTTGTATATGGCGGGTAAAC 57.177 39.130 0.00 0.00 0.00 2.01
2608 2848 6.127675 GGAAAAACTTGTATATGGCGGGTAAA 60.128 38.462 0.00 0.00 0.00 2.01
2609 2849 5.357596 GGAAAAACTTGTATATGGCGGGTAA 59.642 40.000 0.00 0.00 0.00 2.85
2610 2850 4.883006 GGAAAAACTTGTATATGGCGGGTA 59.117 41.667 0.00 0.00 0.00 3.69
2611 2851 3.697542 GGAAAAACTTGTATATGGCGGGT 59.302 43.478 0.00 0.00 0.00 5.28
2612 2852 3.951680 AGGAAAAACTTGTATATGGCGGG 59.048 43.478 0.00 0.00 0.00 6.13
2613 2853 5.576447 AAGGAAAAACTTGTATATGGCGG 57.424 39.130 0.00 0.00 0.00 6.13
2614 2854 5.163794 ACGAAGGAAAAACTTGTATATGGCG 60.164 40.000 0.00 0.00 0.00 5.69
2615 2855 6.190954 ACGAAGGAAAAACTTGTATATGGC 57.809 37.500 0.00 0.00 0.00 4.40
2616 2856 8.040716 AGAACGAAGGAAAAACTTGTATATGG 57.959 34.615 0.00 0.00 0.00 2.74
2617 2857 9.893305 AAAGAACGAAGGAAAAACTTGTATATG 57.107 29.630 0.00 0.00 0.00 1.78
2644 2884 5.067273 AGTCGACTCTCTCTCTCTCAAAAA 58.933 41.667 13.58 0.00 0.00 1.94
2645 2885 4.647611 AGTCGACTCTCTCTCTCTCAAAA 58.352 43.478 13.58 0.00 0.00 2.44
2646 2886 4.280436 AGTCGACTCTCTCTCTCTCAAA 57.720 45.455 13.58 0.00 0.00 2.69
2647 2887 3.973206 AGTCGACTCTCTCTCTCTCAA 57.027 47.619 13.58 0.00 0.00 3.02
2648 2888 3.383505 CCTAGTCGACTCTCTCTCTCTCA 59.616 52.174 23.89 0.00 0.00 3.27
2649 2889 3.383825 ACCTAGTCGACTCTCTCTCTCTC 59.616 52.174 23.89 0.00 0.00 3.20
2650 2890 3.132289 CACCTAGTCGACTCTCTCTCTCT 59.868 52.174 23.89 0.00 0.00 3.10
2651 2891 3.454375 CACCTAGTCGACTCTCTCTCTC 58.546 54.545 23.89 0.00 0.00 3.20
2652 2892 2.419574 GCACCTAGTCGACTCTCTCTCT 60.420 54.545 23.89 0.00 0.00 3.10
2653 2893 1.937899 GCACCTAGTCGACTCTCTCTC 59.062 57.143 23.89 4.66 0.00 3.20
2654 2894 1.557832 AGCACCTAGTCGACTCTCTCT 59.442 52.381 23.89 11.04 0.00 3.10
2655 2895 2.032680 AGCACCTAGTCGACTCTCTC 57.967 55.000 23.89 8.86 0.00 3.20
2656 2896 2.502538 ACTAGCACCTAGTCGACTCTCT 59.497 50.000 23.89 14.44 42.87 3.10
2657 2897 2.610374 CACTAGCACCTAGTCGACTCTC 59.390 54.545 23.89 7.77 44.37 3.20
2658 2898 2.236644 TCACTAGCACCTAGTCGACTCT 59.763 50.000 23.89 14.93 44.37 3.24
2659 2899 2.630158 TCACTAGCACCTAGTCGACTC 58.370 52.381 23.89 7.27 44.37 3.36
2660 2900 2.783609 TCACTAGCACCTAGTCGACT 57.216 50.000 23.66 23.66 44.37 4.18
2661 2901 2.683867 ACATCACTAGCACCTAGTCGAC 59.316 50.000 7.70 7.70 44.37 4.20
2662 2902 3.000684 ACATCACTAGCACCTAGTCGA 57.999 47.619 2.08 4.97 44.37 4.20
2663 2903 3.878103 AGTACATCACTAGCACCTAGTCG 59.122 47.826 2.08 0.32 44.37 4.18
2664 2904 5.221087 GGAAGTACATCACTAGCACCTAGTC 60.221 48.000 0.00 0.00 44.37 2.59
2665 2905 4.645588 GGAAGTACATCACTAGCACCTAGT 59.354 45.833 0.00 0.00 46.75 2.57
2666 2906 4.890581 AGGAAGTACATCACTAGCACCTAG 59.109 45.833 0.00 0.00 39.72 3.02
2667 2907 4.868268 AGGAAGTACATCACTAGCACCTA 58.132 43.478 0.00 0.00 36.04 3.08
2668 2908 3.714144 AGGAAGTACATCACTAGCACCT 58.286 45.455 0.00 0.00 36.04 4.00
2669 2909 4.434520 GAAGGAAGTACATCACTAGCACC 58.565 47.826 0.00 0.00 36.04 5.01
2670 2910 4.106197 CGAAGGAAGTACATCACTAGCAC 58.894 47.826 0.00 0.00 36.04 4.40
2671 2911 3.762288 ACGAAGGAAGTACATCACTAGCA 59.238 43.478 0.00 0.00 36.04 3.49
2672 2912 4.352887 GACGAAGGAAGTACATCACTAGC 58.647 47.826 0.00 0.00 36.04 3.42
2673 2913 4.398358 TGGACGAAGGAAGTACATCACTAG 59.602 45.833 0.00 0.00 36.04 2.57
2674 2914 4.338012 TGGACGAAGGAAGTACATCACTA 58.662 43.478 0.00 0.00 36.04 2.74
2675 2915 3.162666 TGGACGAAGGAAGTACATCACT 58.837 45.455 0.00 0.00 40.05 3.41
2676 2916 3.512680 CTGGACGAAGGAAGTACATCAC 58.487 50.000 0.00 0.00 31.16 3.06
2677 2917 2.496070 CCTGGACGAAGGAAGTACATCA 59.504 50.000 0.00 0.00 40.02 3.07
2678 2918 2.758979 TCCTGGACGAAGGAAGTACATC 59.241 50.000 0.00 0.00 43.57 3.06
2679 2919 2.816411 TCCTGGACGAAGGAAGTACAT 58.184 47.619 0.00 0.00 43.57 2.29
2680 2920 2.297698 TCCTGGACGAAGGAAGTACA 57.702 50.000 0.00 0.00 43.57 2.90
2686 2926 3.170717 ACAAGTATTCCTGGACGAAGGA 58.829 45.455 0.00 0.00 44.88 3.36
2687 2927 3.522553 GACAAGTATTCCTGGACGAAGG 58.477 50.000 0.00 0.00 38.84 3.46
2688 2928 3.179830 CGACAAGTATTCCTGGACGAAG 58.820 50.000 0.00 0.00 34.71 3.79
2689 2929 2.094390 CCGACAAGTATTCCTGGACGAA 60.094 50.000 0.00 0.00 34.71 3.85
2690 2930 1.475280 CCGACAAGTATTCCTGGACGA 59.525 52.381 0.00 0.00 34.71 4.20
2691 2931 1.475280 TCCGACAAGTATTCCTGGACG 59.525 52.381 0.00 0.00 32.90 4.79
2692 2932 2.758979 TCTCCGACAAGTATTCCTGGAC 59.241 50.000 0.00 0.00 0.00 4.02
2693 2933 3.095912 TCTCCGACAAGTATTCCTGGA 57.904 47.619 0.00 0.00 0.00 3.86
2694 2934 3.887621 TTCTCCGACAAGTATTCCTGG 57.112 47.619 0.00 0.00 0.00 4.45
2695 2935 4.572389 CCATTTCTCCGACAAGTATTCCTG 59.428 45.833 0.00 0.00 0.00 3.86
2696 2936 4.469945 TCCATTTCTCCGACAAGTATTCCT 59.530 41.667 0.00 0.00 0.00 3.36
2697 2937 4.766375 TCCATTTCTCCGACAAGTATTCC 58.234 43.478 0.00 0.00 0.00 3.01
2698 2938 5.817816 ACATCCATTTCTCCGACAAGTATTC 59.182 40.000 0.00 0.00 0.00 1.75
2699 2939 5.745227 ACATCCATTTCTCCGACAAGTATT 58.255 37.500 0.00 0.00 0.00 1.89
2700 2940 5.359194 ACATCCATTTCTCCGACAAGTAT 57.641 39.130 0.00 0.00 0.00 2.12
2701 2941 4.819105 ACATCCATTTCTCCGACAAGTA 57.181 40.909 0.00 0.00 0.00 2.24
2702 2942 3.703001 ACATCCATTTCTCCGACAAGT 57.297 42.857 0.00 0.00 0.00 3.16
2703 2943 5.605534 AGATACATCCATTTCTCCGACAAG 58.394 41.667 0.00 0.00 0.00 3.16
2704 2944 5.614324 AGATACATCCATTTCTCCGACAA 57.386 39.130 0.00 0.00 0.00 3.18
2705 2945 5.243954 CCTAGATACATCCATTTCTCCGACA 59.756 44.000 0.00 0.00 0.00 4.35
2706 2946 5.715070 CCTAGATACATCCATTTCTCCGAC 58.285 45.833 0.00 0.00 0.00 4.79
2707 2947 4.220821 GCCTAGATACATCCATTTCTCCGA 59.779 45.833 0.00 0.00 0.00 4.55
2708 2948 4.499183 GCCTAGATACATCCATTTCTCCG 58.501 47.826 0.00 0.00 0.00 4.63
2709 2949 4.021016 ACGCCTAGATACATCCATTTCTCC 60.021 45.833 0.00 0.00 0.00 3.71
2710 2950 5.140747 ACGCCTAGATACATCCATTTCTC 57.859 43.478 0.00 0.00 0.00 2.87
2711 2951 6.859112 ATACGCCTAGATACATCCATTTCT 57.141 37.500 0.00 0.00 0.00 2.52
2712 2952 7.907214 AAATACGCCTAGATACATCCATTTC 57.093 36.000 0.00 0.00 0.00 2.17
2713 2953 9.436957 CTAAAATACGCCTAGATACATCCATTT 57.563 33.333 0.00 0.00 0.00 2.32
2714 2954 8.594550 ACTAAAATACGCCTAGATACATCCATT 58.405 33.333 0.00 0.00 0.00 3.16
2715 2955 8.135382 ACTAAAATACGCCTAGATACATCCAT 57.865 34.615 0.00 0.00 0.00 3.41
2716 2956 7.534723 ACTAAAATACGCCTAGATACATCCA 57.465 36.000 0.00 0.00 0.00 3.41
2717 2957 8.828688 AAACTAAAATACGCCTAGATACATCC 57.171 34.615 0.00 0.00 0.00 3.51
2749 2989 9.787532 TGTCGGAGAAATGAATAAAAATGAATC 57.212 29.630 0.00 0.00 39.69 2.52
2751 2991 9.624697 CTTGTCGGAGAAATGAATAAAAATGAA 57.375 29.630 0.00 0.00 39.69 2.57
2752 2992 8.792633 ACTTGTCGGAGAAATGAATAAAAATGA 58.207 29.630 0.00 0.00 39.69 2.57
2753 2993 8.970691 ACTTGTCGGAGAAATGAATAAAAATG 57.029 30.769 0.00 0.00 39.69 2.32
2759 2999 9.443323 TGAAAATACTTGTCGGAGAAATGAATA 57.557 29.630 0.00 0.00 39.69 1.75
2760 3000 8.335532 TGAAAATACTTGTCGGAGAAATGAAT 57.664 30.769 0.00 0.00 39.69 2.57
2761 3001 7.659799 TCTGAAAATACTTGTCGGAGAAATGAA 59.340 33.333 0.00 0.00 39.69 2.57
2762 3002 7.117812 GTCTGAAAATACTTGTCGGAGAAATGA 59.882 37.037 0.00 0.00 39.69 2.57
2763 3003 7.237173 GTCTGAAAATACTTGTCGGAGAAATG 58.763 38.462 0.00 0.00 39.69 2.32
2764 3004 6.090898 CGTCTGAAAATACTTGTCGGAGAAAT 59.909 38.462 0.00 0.00 39.69 2.17
2765 3005 5.404366 CGTCTGAAAATACTTGTCGGAGAAA 59.596 40.000 0.00 0.00 39.69 2.52
2766 3006 4.921515 CGTCTGAAAATACTTGTCGGAGAA 59.078 41.667 0.00 0.00 39.69 2.87
2767 3007 4.482386 CGTCTGAAAATACTTGTCGGAGA 58.518 43.478 0.00 0.00 0.00 3.71
2768 3008 3.612860 CCGTCTGAAAATACTTGTCGGAG 59.387 47.826 0.00 0.00 38.03 4.63
2769 3009 3.256383 TCCGTCTGAAAATACTTGTCGGA 59.744 43.478 0.00 0.00 41.50 4.55
2770 3010 3.581755 TCCGTCTGAAAATACTTGTCGG 58.418 45.455 0.00 0.00 37.29 4.79
2771 3011 3.612860 CCTCCGTCTGAAAATACTTGTCG 59.387 47.826 0.00 0.00 0.00 4.35
2772 3012 4.817517 TCCTCCGTCTGAAAATACTTGTC 58.182 43.478 0.00 0.00 0.00 3.18
2773 3013 4.884668 TCCTCCGTCTGAAAATACTTGT 57.115 40.909 0.00 0.00 0.00 3.16
2774 3014 5.238583 ACTTCCTCCGTCTGAAAATACTTG 58.761 41.667 0.00 0.00 0.00 3.16
2775 3015 5.485209 ACTTCCTCCGTCTGAAAATACTT 57.515 39.130 0.00 0.00 0.00 2.24
2776 3016 5.479375 TGTACTTCCTCCGTCTGAAAATACT 59.521 40.000 0.00 0.00 0.00 2.12
2777 3017 5.717119 TGTACTTCCTCCGTCTGAAAATAC 58.283 41.667 0.00 0.00 0.00 1.89
2778 3018 5.988310 TGTACTTCCTCCGTCTGAAAATA 57.012 39.130 0.00 0.00 0.00 1.40
2779 3019 4.884668 TGTACTTCCTCCGTCTGAAAAT 57.115 40.909 0.00 0.00 0.00 1.82
2780 3020 4.675976 TTGTACTTCCTCCGTCTGAAAA 57.324 40.909 0.00 0.00 0.00 2.29
2781 3021 4.675976 TTTGTACTTCCTCCGTCTGAAA 57.324 40.909 0.00 0.00 0.00 2.69
2782 3022 4.527038 AGATTTGTACTTCCTCCGTCTGAA 59.473 41.667 0.00 0.00 0.00 3.02
2783 3023 4.087182 AGATTTGTACTTCCTCCGTCTGA 58.913 43.478 0.00 0.00 0.00 3.27
2784 3024 4.457834 AGATTTGTACTTCCTCCGTCTG 57.542 45.455 0.00 0.00 0.00 3.51
2785 3025 4.645588 CCTAGATTTGTACTTCCTCCGTCT 59.354 45.833 0.00 0.00 0.00 4.18
2786 3026 4.643784 TCCTAGATTTGTACTTCCTCCGTC 59.356 45.833 0.00 0.00 0.00 4.79
2787 3027 4.607239 TCCTAGATTTGTACTTCCTCCGT 58.393 43.478 0.00 0.00 0.00 4.69
2788 3028 4.645588 ACTCCTAGATTTGTACTTCCTCCG 59.354 45.833 0.00 0.00 0.00 4.63
2789 3029 6.547930 AACTCCTAGATTTGTACTTCCTCC 57.452 41.667 0.00 0.00 0.00 4.30
2790 3030 6.752815 CGAAACTCCTAGATTTGTACTTCCTC 59.247 42.308 0.00 0.00 0.00 3.71
2791 3031 6.210984 ACGAAACTCCTAGATTTGTACTTCCT 59.789 38.462 0.00 0.00 0.00 3.36
2792 3032 6.310711 CACGAAACTCCTAGATTTGTACTTCC 59.689 42.308 0.00 0.00 0.00 3.46
2793 3033 6.867293 ACACGAAACTCCTAGATTTGTACTTC 59.133 38.462 0.00 0.00 0.00 3.01
2794 3034 6.756221 ACACGAAACTCCTAGATTTGTACTT 58.244 36.000 0.00 0.00 0.00 2.24
2795 3035 6.342338 ACACGAAACTCCTAGATTTGTACT 57.658 37.500 0.00 0.00 0.00 2.73
2796 3036 8.524870 TTTACACGAAACTCCTAGATTTGTAC 57.475 34.615 0.00 0.00 0.00 2.90
2797 3037 9.715121 AATTTACACGAAACTCCTAGATTTGTA 57.285 29.630 0.00 0.00 0.00 2.41
2798 3038 8.504005 CAATTTACACGAAACTCCTAGATTTGT 58.496 33.333 0.00 0.00 0.00 2.83
2799 3039 8.717821 TCAATTTACACGAAACTCCTAGATTTG 58.282 33.333 0.00 0.00 0.00 2.32
2800 3040 8.842358 TCAATTTACACGAAACTCCTAGATTT 57.158 30.769 0.00 0.00 0.00 2.17
2801 3041 7.064728 GCTCAATTTACACGAAACTCCTAGATT 59.935 37.037 0.00 0.00 0.00 2.40
2802 3042 6.535508 GCTCAATTTACACGAAACTCCTAGAT 59.464 38.462 0.00 0.00 0.00 1.98
2803 3043 5.867716 GCTCAATTTACACGAAACTCCTAGA 59.132 40.000 0.00 0.00 0.00 2.43
2804 3044 5.063564 GGCTCAATTTACACGAAACTCCTAG 59.936 44.000 0.00 0.00 0.00 3.02
2805 3045 4.933400 GGCTCAATTTACACGAAACTCCTA 59.067 41.667 0.00 0.00 0.00 2.94
2806 3046 3.751698 GGCTCAATTTACACGAAACTCCT 59.248 43.478 0.00 0.00 0.00 3.69
2807 3047 3.500680 TGGCTCAATTTACACGAAACTCC 59.499 43.478 0.00 0.00 0.00 3.85
2808 3048 4.742438 TGGCTCAATTTACACGAAACTC 57.258 40.909 0.00 0.00 0.00 3.01
2809 3049 5.705609 AATGGCTCAATTTACACGAAACT 57.294 34.783 0.00 0.00 0.00 2.66
2810 3050 6.200097 ACAAAATGGCTCAATTTACACGAAAC 59.800 34.615 0.00 0.00 0.00 2.78
2811 3051 6.276847 ACAAAATGGCTCAATTTACACGAAA 58.723 32.000 0.00 0.00 0.00 3.46
2812 3052 5.837437 ACAAAATGGCTCAATTTACACGAA 58.163 33.333 0.00 0.00 0.00 3.85
2813 3053 5.446143 ACAAAATGGCTCAATTTACACGA 57.554 34.783 0.00 0.00 0.00 4.35
2814 3054 6.378582 AGTACAAAATGGCTCAATTTACACG 58.621 36.000 0.00 0.00 0.00 4.49
2815 3055 8.587952 AAAGTACAAAATGGCTCAATTTACAC 57.412 30.769 0.00 0.00 0.00 2.90
2823 3063 9.237187 TGATGTATAAAAGTACAAAATGGCTCA 57.763 29.630 0.00 0.00 38.03 4.26
2826 3066 9.248291 CCATGATGTATAAAAGTACAAAATGGC 57.752 33.333 13.64 0.00 40.64 4.40
2827 3067 9.748708 CCCATGATGTATAAAAGTACAAAATGG 57.251 33.333 16.56 16.56 43.16 3.16
2831 3071 8.670135 CGAACCCATGATGTATAAAAGTACAAA 58.330 33.333 0.00 0.00 38.03 2.83
2832 3072 7.825270 ACGAACCCATGATGTATAAAAGTACAA 59.175 33.333 0.00 0.00 38.03 2.41
2833 3073 7.279090 CACGAACCCATGATGTATAAAAGTACA 59.721 37.037 0.00 0.00 38.79 2.90
2834 3074 7.279313 ACACGAACCCATGATGTATAAAAGTAC 59.721 37.037 0.00 0.00 0.00 2.73
2835 3075 7.279090 CACACGAACCCATGATGTATAAAAGTA 59.721 37.037 0.00 0.00 0.00 2.24
2836 3076 6.093495 CACACGAACCCATGATGTATAAAAGT 59.907 38.462 0.00 0.00 0.00 2.66
2837 3077 6.486248 CACACGAACCCATGATGTATAAAAG 58.514 40.000 0.00 0.00 0.00 2.27
2838 3078 5.163703 GCACACGAACCCATGATGTATAAAA 60.164 40.000 0.00 0.00 0.00 1.52
2839 3079 4.334203 GCACACGAACCCATGATGTATAAA 59.666 41.667 0.00 0.00 0.00 1.40
2840 3080 3.874543 GCACACGAACCCATGATGTATAA 59.125 43.478 0.00 0.00 0.00 0.98
2841 3081 3.462982 GCACACGAACCCATGATGTATA 58.537 45.455 0.00 0.00 0.00 1.47
2842 3082 2.288666 GCACACGAACCCATGATGTAT 58.711 47.619 0.00 0.00 0.00 2.29
2843 3083 1.677518 GGCACACGAACCCATGATGTA 60.678 52.381 0.00 0.00 0.00 2.29
2844 3084 0.960364 GGCACACGAACCCATGATGT 60.960 55.000 0.00 0.00 0.00 3.06
2845 3085 0.959867 TGGCACACGAACCCATGATG 60.960 55.000 0.00 0.00 0.00 3.07
2846 3086 0.677731 CTGGCACACGAACCCATGAT 60.678 55.000 0.00 0.00 0.00 2.45
2847 3087 1.302431 CTGGCACACGAACCCATGA 60.302 57.895 0.00 0.00 0.00 3.07
2848 3088 0.321210 TACTGGCACACGAACCCATG 60.321 55.000 0.00 0.00 0.00 3.66
2849 3089 0.618458 ATACTGGCACACGAACCCAT 59.382 50.000 0.00 0.00 0.00 4.00
2850 3090 0.398696 AATACTGGCACACGAACCCA 59.601 50.000 0.00 0.00 0.00 4.51
2851 3091 1.467342 GAAATACTGGCACACGAACCC 59.533 52.381 0.00 0.00 0.00 4.11
2852 3092 1.467342 GGAAATACTGGCACACGAACC 59.533 52.381 0.00 0.00 0.00 3.62
2853 3093 1.467342 GGGAAATACTGGCACACGAAC 59.533 52.381 0.00 0.00 0.00 3.95
2854 3094 1.612199 GGGGAAATACTGGCACACGAA 60.612 52.381 0.00 0.00 0.00 3.85
2855 3095 0.035820 GGGGAAATACTGGCACACGA 60.036 55.000 0.00 0.00 0.00 4.35
2856 3096 0.322098 TGGGGAAATACTGGCACACG 60.322 55.000 0.00 0.00 0.00 4.49
2857 3097 1.173913 GTGGGGAAATACTGGCACAC 58.826 55.000 0.00 0.00 0.00 3.82
2858 3098 0.774276 TGTGGGGAAATACTGGCACA 59.226 50.000 0.00 0.00 0.00 4.57
2859 3099 1.173913 GTGTGGGGAAATACTGGCAC 58.826 55.000 0.00 0.00 0.00 5.01
2860 3100 0.774276 TGTGTGGGGAAATACTGGCA 59.226 50.000 0.00 0.00 0.00 4.92
2861 3101 1.173913 GTGTGTGGGGAAATACTGGC 58.826 55.000 0.00 0.00 0.00 4.85
2862 3102 2.159382 GTGTGTGTGGGGAAATACTGG 58.841 52.381 0.00 0.00 0.00 4.00
2863 3103 2.813754 CTGTGTGTGTGGGGAAATACTG 59.186 50.000 0.00 0.00 0.00 2.74
2864 3104 2.708861 TCTGTGTGTGTGGGGAAATACT 59.291 45.455 0.00 0.00 0.00 2.12
2865 3105 3.074412 CTCTGTGTGTGTGGGGAAATAC 58.926 50.000 0.00 0.00 0.00 1.89
2866 3106 2.552155 GCTCTGTGTGTGTGGGGAAATA 60.552 50.000 0.00 0.00 0.00 1.40
2867 3107 1.819305 GCTCTGTGTGTGTGGGGAAAT 60.819 52.381 0.00 0.00 0.00 2.17
2868 3108 0.465460 GCTCTGTGTGTGTGGGGAAA 60.465 55.000 0.00 0.00 0.00 3.13
2869 3109 1.148273 GCTCTGTGTGTGTGGGGAA 59.852 57.895 0.00 0.00 0.00 3.97
2870 3110 2.828868 GCTCTGTGTGTGTGGGGA 59.171 61.111 0.00 0.00 0.00 4.81
2871 3111 2.666190 CGCTCTGTGTGTGTGGGG 60.666 66.667 0.00 0.00 0.00 4.96
2872 3112 3.349006 GCGCTCTGTGTGTGTGGG 61.349 66.667 0.00 0.00 0.00 4.61
2873 3113 3.705638 CGCGCTCTGTGTGTGTGG 61.706 66.667 5.56 0.00 32.50 4.17
2874 3114 4.360027 GCGCGCTCTGTGTGTGTG 62.360 66.667 26.67 0.00 38.77 3.82
2889 3129 4.936248 CTCTCTCTCTCGCGCGCG 62.936 72.222 44.84 44.84 41.35 6.86
2890 3130 3.506312 CTCTCTCTCTCTCGCGCGC 62.506 68.421 27.95 23.91 0.00 6.86
2891 3131 1.821241 CTCTCTCTCTCTCTCGCGCG 61.821 65.000 26.76 26.76 0.00 6.86
2892 3132 0.529773 TCTCTCTCTCTCTCTCGCGC 60.530 60.000 0.00 0.00 0.00 6.86
2893 3133 1.491670 CTCTCTCTCTCTCTCTCGCG 58.508 60.000 0.00 0.00 0.00 5.87


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.