Multiple sequence alignment - TraesCS2B01G335200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G335200 chr2B 100.000 5994 0 0 1 5994 478891717 478897710 0.000000e+00 11069.0
1 TraesCS2B01G335200 chr2B 95.238 231 8 3 74 302 237318334 237318563 4.420000e-96 363.0
2 TraesCS2B01G335200 chr2D 92.208 3465 142 51 317 3722 404404264 404400869 0.000000e+00 4785.0
3 TraesCS2B01G335200 chr2D 89.846 1300 68 28 4485 5758 404399413 404398152 0.000000e+00 1611.0
4 TraesCS2B01G335200 chr2D 93.575 607 38 1 3871 4477 404400622 404400017 0.000000e+00 904.0
5 TraesCS2B01G335200 chr2D 87.383 214 13 8 5781 5994 404398100 404397901 3.610000e-57 233.0
6 TraesCS2B01G335200 chr2D 98.182 55 1 0 3746 3800 404400870 404400816 4.940000e-16 97.1
7 TraesCS2B01G335200 chr2A 91.069 3359 178 49 505 3800 542663737 542660438 0.000000e+00 4429.0
8 TraesCS2B01G335200 chr2A 90.949 1149 72 19 4480 5618 542659165 542658039 0.000000e+00 1517.0
9 TraesCS2B01G335200 chr2A 95.222 607 28 1 3871 4477 542660309 542659704 0.000000e+00 959.0
10 TraesCS2B01G335200 chr2A 82.081 173 10 2 308 479 542663946 542663794 1.750000e-25 128.0
11 TraesCS2B01G335200 chr7B 96.364 220 8 0 75 294 44809706 44809487 4.420000e-96 363.0
12 TraesCS2B01G335200 chr4A 95.495 222 10 0 75 296 675226330 675226109 7.390000e-94 355.0
13 TraesCS2B01G335200 chr4A 92.857 84 6 0 1 84 694884856 694884939 8.160000e-24 122.0
14 TraesCS2B01G335200 chr1B 95.111 225 11 0 75 299 283290447 283290223 7.390000e-94 355.0
15 TraesCS2B01G335200 chr1B 95.495 222 10 0 75 296 596317653 596317874 7.390000e-94 355.0
16 TraesCS2B01G335200 chr1B 93.991 233 13 1 75 307 615614813 615614582 9.560000e-93 351.0
17 TraesCS2B01G335200 chr1B 88.087 277 33 0 20 296 570480224 570479948 4.480000e-86 329.0
18 TraesCS2B01G335200 chr6B 94.397 232 10 3 75 306 279087202 279087430 2.660000e-93 353.0
19 TraesCS2B01G335200 chr5B 94.737 228 11 1 75 302 648994943 648995169 2.660000e-93 353.0
20 TraesCS2B01G335200 chr6A 94.253 87 4 1 1 87 57708353 57708268 1.360000e-26 132.0
21 TraesCS2B01G335200 chr6A 96.203 79 3 0 1 79 603303971 603303893 4.880000e-26 130.0
22 TraesCS2B01G335200 chr4D 95.181 83 4 0 4 86 4098711 4098629 1.360000e-26 132.0
23 TraesCS2B01G335200 chr3B 97.403 77 2 0 1 77 564250122 564250198 1.360000e-26 132.0
24 TraesCS2B01G335200 chr3B 97.403 77 2 0 1 77 786512737 786512813 1.360000e-26 132.0
25 TraesCS2B01G335200 chr3D 95.000 80 4 0 1 80 554686242 554686321 6.310000e-25 126.0
26 TraesCS2B01G335200 chr4B 85.577 104 15 0 6 109 551080521 551080624 6.350000e-20 110.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G335200 chr2B 478891717 478897710 5993 False 11069.00 11069 100.00000 1 5994 1 chr2B.!!$F2 5993
1 TraesCS2B01G335200 chr2D 404397901 404404264 6363 True 1526.02 4785 92.23880 317 5994 5 chr2D.!!$R1 5677
2 TraesCS2B01G335200 chr2A 542658039 542663946 5907 True 1758.25 4429 89.83025 308 5618 4 chr2A.!!$R1 5310

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
174 175 0.029834 GCATTGGGAAGCGCTATGTG 59.970 55.0 12.05 5.56 33.74 3.21 F
293 294 0.043334 ACTCCCACTATGACCAGCCT 59.957 55.0 0.00 0.00 0.00 4.58 F
1295 1376 0.172127 GCGATCTGCTGTGACTCTGA 59.828 55.0 0.00 0.00 41.73 3.27 F
2412 2535 0.040157 CGAGTGTTCACCGTTCGGTA 60.040 55.0 16.51 0.00 36.64 4.02 F
3273 3413 0.899717 TTTGGGATGCCTTGACTGCC 60.900 55.0 4.35 0.00 0.00 4.85 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1316 1397 0.166814 GTCGAACATCTGCAACCAGC 59.833 55.0 0.00 0.00 45.96 4.85 R
1820 1933 1.645034 AAACGATGATCAGCCGACAG 58.355 50.0 22.04 4.55 0.00 3.51 R
2554 2678 0.993509 TCTAAGGGGGCCAATCTGGG 60.994 60.0 4.39 0.00 38.19 4.45 R
3312 3452 0.171679 CAATTTGATCCGCTGCAGCA 59.828 50.0 36.03 20.16 42.21 4.41 R
5188 6069 0.108945 AGAGGTAGCCGTTAACACGC 60.109 55.0 6.39 6.49 45.72 5.34 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
45 46 9.788960 AAAACTTTGACTTAGAACAAAAGCTAG 57.211 29.630 0.00 0.00 35.95 3.42
46 47 8.732746 AACTTTGACTTAGAACAAAAGCTAGA 57.267 30.769 0.00 0.00 35.95 2.43
47 48 8.732746 ACTTTGACTTAGAACAAAAGCTAGAA 57.267 30.769 0.00 0.00 35.95 2.10
48 49 8.831550 ACTTTGACTTAGAACAAAAGCTAGAAG 58.168 33.333 0.00 0.00 35.95 2.85
49 50 8.732746 TTTGACTTAGAACAAAAGCTAGAAGT 57.267 30.769 0.00 0.00 33.90 3.01
50 51 9.826574 TTTGACTTAGAACAAAAGCTAGAAGTA 57.173 29.630 0.00 0.00 33.90 2.24
51 52 8.813643 TGACTTAGAACAAAAGCTAGAAGTAC 57.186 34.615 0.00 0.00 0.00 2.73
52 53 8.418662 TGACTTAGAACAAAAGCTAGAAGTACA 58.581 33.333 0.00 0.00 0.00 2.90
53 54 8.590719 ACTTAGAACAAAAGCTAGAAGTACAC 57.409 34.615 0.00 0.00 0.00 2.90
54 55 8.422566 ACTTAGAACAAAAGCTAGAAGTACACT 58.577 33.333 0.00 0.00 0.00 3.55
55 56 9.262358 CTTAGAACAAAAGCTAGAAGTACACTT 57.738 33.333 0.00 0.00 39.23 3.16
58 59 9.780186 AGAACAAAAGCTAGAAGTACACTTATT 57.220 29.630 0.00 0.00 36.11 1.40
60 61 8.240883 ACAAAAGCTAGAAGTACACTTATTCG 57.759 34.615 0.00 0.00 36.11 3.34
61 62 6.889019 AAAGCTAGAAGTACACTTATTCGC 57.111 37.500 0.00 0.00 36.11 4.70
62 63 4.599047 AGCTAGAAGTACACTTATTCGCG 58.401 43.478 0.00 0.00 36.11 5.87
63 64 3.729716 GCTAGAAGTACACTTATTCGCGG 59.270 47.826 6.13 0.00 36.11 6.46
64 65 4.497006 GCTAGAAGTACACTTATTCGCGGA 60.497 45.833 6.13 0.00 36.11 5.54
65 66 3.767278 AGAAGTACACTTATTCGCGGAC 58.233 45.455 6.13 0.00 36.11 4.79
66 67 3.192001 AGAAGTACACTTATTCGCGGACA 59.808 43.478 6.13 0.00 36.11 4.02
67 68 3.146618 AGTACACTTATTCGCGGACAG 57.853 47.619 6.13 0.00 0.00 3.51
68 69 2.751259 AGTACACTTATTCGCGGACAGA 59.249 45.455 6.13 0.00 0.00 3.41
69 70 2.279582 ACACTTATTCGCGGACAGAG 57.720 50.000 6.13 0.00 0.00 3.35
70 71 1.135083 ACACTTATTCGCGGACAGAGG 60.135 52.381 6.13 0.00 0.00 3.69
71 72 0.460311 ACTTATTCGCGGACAGAGGG 59.540 55.000 6.13 0.00 0.00 4.30
72 73 0.744874 CTTATTCGCGGACAGAGGGA 59.255 55.000 6.13 0.00 0.00 4.20
73 74 0.744874 TTATTCGCGGACAGAGGGAG 59.255 55.000 6.13 0.00 32.22 4.30
74 75 0.395311 TATTCGCGGACAGAGGGAGT 60.395 55.000 6.13 0.00 32.22 3.85
75 76 0.395311 ATTCGCGGACAGAGGGAGTA 60.395 55.000 6.13 0.00 32.22 2.59
76 77 0.395311 TTCGCGGACAGAGGGAGTAT 60.395 55.000 6.13 0.00 32.22 2.12
77 78 1.101635 TCGCGGACAGAGGGAGTATG 61.102 60.000 6.13 0.00 0.00 2.39
78 79 1.384989 CGCGGACAGAGGGAGTATGT 61.385 60.000 0.00 0.00 31.51 2.29
79 80 0.824759 GCGGACAGAGGGAGTATGTT 59.175 55.000 0.00 0.00 27.90 2.71
80 81 2.029623 GCGGACAGAGGGAGTATGTTA 58.970 52.381 0.00 0.00 27.90 2.41
81 82 2.223758 GCGGACAGAGGGAGTATGTTAC 60.224 54.545 0.00 0.00 27.90 2.50
82 83 3.288964 CGGACAGAGGGAGTATGTTACT 58.711 50.000 0.00 0.00 42.86 2.24
83 84 4.458397 CGGACAGAGGGAGTATGTTACTA 58.542 47.826 0.00 0.00 39.59 1.82
84 85 4.275443 CGGACAGAGGGAGTATGTTACTAC 59.725 50.000 0.00 0.00 39.59 2.73
95 96 7.659186 GGAGTATGTTACTACCTTCATAGTGG 58.341 42.308 0.00 0.00 39.59 4.00
96 97 7.255871 GGAGTATGTTACTACCTTCATAGTGGG 60.256 44.444 0.00 0.00 39.59 4.61
97 98 7.130775 AGTATGTTACTACCTTCATAGTGGGT 58.869 38.462 0.00 0.00 37.23 4.51
98 99 8.284435 AGTATGTTACTACCTTCATAGTGGGTA 58.716 37.037 0.00 0.00 37.23 3.69
103 104 5.517322 CTACCTTCATAGTGGGTAGTGTC 57.483 47.826 9.46 0.00 44.30 3.67
104 105 3.786553 ACCTTCATAGTGGGTAGTGTCA 58.213 45.455 0.00 0.00 0.00 3.58
105 106 4.362677 ACCTTCATAGTGGGTAGTGTCAT 58.637 43.478 0.00 0.00 0.00 3.06
106 107 5.525484 ACCTTCATAGTGGGTAGTGTCATA 58.475 41.667 0.00 0.00 0.00 2.15
107 108 5.598830 ACCTTCATAGTGGGTAGTGTCATAG 59.401 44.000 0.00 0.00 0.00 2.23
108 109 5.011125 CCTTCATAGTGGGTAGTGTCATAGG 59.989 48.000 0.00 0.00 0.00 2.57
109 110 5.138758 TCATAGTGGGTAGTGTCATAGGT 57.861 43.478 0.00 0.00 0.00 3.08
110 111 4.893524 TCATAGTGGGTAGTGTCATAGGTG 59.106 45.833 0.00 0.00 0.00 4.00
111 112 3.185880 AGTGGGTAGTGTCATAGGTGT 57.814 47.619 0.00 0.00 0.00 4.16
112 113 2.832129 AGTGGGTAGTGTCATAGGTGTG 59.168 50.000 0.00 0.00 0.00 3.82
113 114 2.093658 GTGGGTAGTGTCATAGGTGTGG 60.094 54.545 0.00 0.00 0.00 4.17
114 115 2.185387 GGGTAGTGTCATAGGTGTGGT 58.815 52.381 0.00 0.00 0.00 4.16
115 116 3.245694 TGGGTAGTGTCATAGGTGTGGTA 60.246 47.826 0.00 0.00 0.00 3.25
116 117 3.770933 GGGTAGTGTCATAGGTGTGGTAA 59.229 47.826 0.00 0.00 0.00 2.85
117 118 4.382362 GGGTAGTGTCATAGGTGTGGTAAC 60.382 50.000 0.00 0.00 0.00 2.50
162 163 7.775120 ACTTTTTAGACTCATTATGCATTGGG 58.225 34.615 3.54 0.00 0.00 4.12
163 164 7.615365 ACTTTTTAGACTCATTATGCATTGGGA 59.385 33.333 3.54 0.00 0.00 4.37
164 165 7.953005 TTTTAGACTCATTATGCATTGGGAA 57.047 32.000 3.54 0.00 0.00 3.97
165 166 7.572523 TTTAGACTCATTATGCATTGGGAAG 57.427 36.000 3.54 0.00 0.00 3.46
166 167 3.887716 AGACTCATTATGCATTGGGAAGC 59.112 43.478 3.54 0.00 0.00 3.86
167 168 2.620115 ACTCATTATGCATTGGGAAGCG 59.380 45.455 3.54 0.00 0.00 4.68
168 169 1.337703 TCATTATGCATTGGGAAGCGC 59.662 47.619 3.54 0.00 0.00 5.92
169 170 1.338973 CATTATGCATTGGGAAGCGCT 59.661 47.619 2.64 2.64 0.00 5.92
170 171 2.340210 TTATGCATTGGGAAGCGCTA 57.660 45.000 12.05 0.00 0.00 4.26
171 172 2.566833 TATGCATTGGGAAGCGCTAT 57.433 45.000 12.05 0.00 0.00 2.97
172 173 0.956633 ATGCATTGGGAAGCGCTATG 59.043 50.000 12.05 11.94 34.15 2.23
173 174 0.394216 TGCATTGGGAAGCGCTATGT 60.394 50.000 12.05 0.00 33.74 2.29
174 175 0.029834 GCATTGGGAAGCGCTATGTG 59.970 55.000 12.05 5.56 33.74 3.21
175 176 1.667236 CATTGGGAAGCGCTATGTGA 58.333 50.000 12.05 0.00 0.00 3.58
176 177 2.224606 CATTGGGAAGCGCTATGTGAT 58.775 47.619 12.05 0.00 0.00 3.06
177 178 1.667236 TTGGGAAGCGCTATGTGATG 58.333 50.000 12.05 0.00 0.00 3.07
178 179 0.179048 TGGGAAGCGCTATGTGATGG 60.179 55.000 12.05 0.00 0.00 3.51
179 180 0.179045 GGGAAGCGCTATGTGATGGT 60.179 55.000 12.05 0.00 0.00 3.55
180 181 1.070134 GGGAAGCGCTATGTGATGGTA 59.930 52.381 12.05 0.00 0.00 3.25
181 182 2.484770 GGGAAGCGCTATGTGATGGTAA 60.485 50.000 12.05 0.00 0.00 2.85
182 183 2.544267 GGAAGCGCTATGTGATGGTAAC 59.456 50.000 12.05 0.00 0.00 2.50
211 212 9.771534 ATTATGTTACTCTATTTGCCTCTCTTC 57.228 33.333 0.00 0.00 0.00 2.87
212 213 6.859112 TGTTACTCTATTTGCCTCTCTTCT 57.141 37.500 0.00 0.00 0.00 2.85
213 214 7.246171 TGTTACTCTATTTGCCTCTCTTCTT 57.754 36.000 0.00 0.00 0.00 2.52
214 215 8.362464 TGTTACTCTATTTGCCTCTCTTCTTA 57.638 34.615 0.00 0.00 0.00 2.10
215 216 8.982723 TGTTACTCTATTTGCCTCTCTTCTTAT 58.017 33.333 0.00 0.00 0.00 1.73
216 217 9.825109 GTTACTCTATTTGCCTCTCTTCTTATT 57.175 33.333 0.00 0.00 0.00 1.40
219 220 9.825109 ACTCTATTTGCCTCTCTTCTTATTAAC 57.175 33.333 0.00 0.00 0.00 2.01
225 226 9.436957 TTTGCCTCTCTTCTTATTAACTACTTG 57.563 33.333 0.00 0.00 0.00 3.16
226 227 7.042335 TGCCTCTCTTCTTATTAACTACTTGC 58.958 38.462 0.00 0.00 0.00 4.01
227 228 6.480651 GCCTCTCTTCTTATTAACTACTTGCC 59.519 42.308 0.00 0.00 0.00 4.52
228 229 7.556844 CCTCTCTTCTTATTAACTACTTGCCA 58.443 38.462 0.00 0.00 0.00 4.92
229 230 7.492994 CCTCTCTTCTTATTAACTACTTGCCAC 59.507 40.741 0.00 0.00 0.00 5.01
230 231 7.903145 TCTCTTCTTATTAACTACTTGCCACA 58.097 34.615 0.00 0.00 0.00 4.17
231 232 8.540388 TCTCTTCTTATTAACTACTTGCCACAT 58.460 33.333 0.00 0.00 0.00 3.21
232 233 8.718102 TCTTCTTATTAACTACTTGCCACATC 57.282 34.615 0.00 0.00 0.00 3.06
233 234 8.318412 TCTTCTTATTAACTACTTGCCACATCA 58.682 33.333 0.00 0.00 0.00 3.07
234 235 7.843490 TCTTATTAACTACTTGCCACATCAC 57.157 36.000 0.00 0.00 0.00 3.06
235 236 6.821665 TCTTATTAACTACTTGCCACATCACC 59.178 38.462 0.00 0.00 0.00 4.02
236 237 2.949177 AACTACTTGCCACATCACCA 57.051 45.000 0.00 0.00 0.00 4.17
237 238 3.439857 AACTACTTGCCACATCACCAT 57.560 42.857 0.00 0.00 0.00 3.55
238 239 3.439857 ACTACTTGCCACATCACCATT 57.560 42.857 0.00 0.00 0.00 3.16
239 240 3.766545 ACTACTTGCCACATCACCATTT 58.233 40.909 0.00 0.00 0.00 2.32
240 241 4.151883 ACTACTTGCCACATCACCATTTT 58.848 39.130 0.00 0.00 0.00 1.82
241 242 4.588528 ACTACTTGCCACATCACCATTTTT 59.411 37.500 0.00 0.00 0.00 1.94
242 243 5.772672 ACTACTTGCCACATCACCATTTTTA 59.227 36.000 0.00 0.00 0.00 1.52
243 244 4.881920 ACTTGCCACATCACCATTTTTAC 58.118 39.130 0.00 0.00 0.00 2.01
244 245 4.588528 ACTTGCCACATCACCATTTTTACT 59.411 37.500 0.00 0.00 0.00 2.24
245 246 5.070313 ACTTGCCACATCACCATTTTTACTT 59.930 36.000 0.00 0.00 0.00 2.24
246 247 6.266558 ACTTGCCACATCACCATTTTTACTTA 59.733 34.615 0.00 0.00 0.00 2.24
247 248 6.019779 TGCCACATCACCATTTTTACTTAC 57.980 37.500 0.00 0.00 0.00 2.34
248 249 5.092781 GCCACATCACCATTTTTACTTACG 58.907 41.667 0.00 0.00 0.00 3.18
249 250 5.335348 GCCACATCACCATTTTTACTTACGT 60.335 40.000 0.00 0.00 0.00 3.57
250 251 6.083630 CCACATCACCATTTTTACTTACGTG 58.916 40.000 0.00 0.00 0.00 4.49
251 252 6.083630 CACATCACCATTTTTACTTACGTGG 58.916 40.000 0.00 0.00 0.00 4.94
252 253 4.752661 TCACCATTTTTACTTACGTGGC 57.247 40.909 0.00 0.00 0.00 5.01
253 254 4.135306 TCACCATTTTTACTTACGTGGCA 58.865 39.130 0.00 0.00 0.00 4.92
254 255 4.762765 TCACCATTTTTACTTACGTGGCAT 59.237 37.500 0.00 0.00 0.00 4.40
255 256 5.092781 CACCATTTTTACTTACGTGGCATC 58.907 41.667 0.00 0.00 0.00 3.91
256 257 5.007682 ACCATTTTTACTTACGTGGCATCT 58.992 37.500 0.00 0.00 0.00 2.90
257 258 6.092944 CACCATTTTTACTTACGTGGCATCTA 59.907 38.462 0.00 0.00 0.00 1.98
258 259 6.826741 ACCATTTTTACTTACGTGGCATCTAT 59.173 34.615 0.00 0.00 0.00 1.98
259 260 7.132213 CCATTTTTACTTACGTGGCATCTATG 58.868 38.462 0.00 0.00 0.00 2.23
260 261 7.201696 CCATTTTTACTTACGTGGCATCTATGT 60.202 37.037 0.00 0.00 0.00 2.29
261 262 7.675962 TTTTTACTTACGTGGCATCTATGTT 57.324 32.000 0.00 0.00 0.00 2.71
262 263 8.774890 TTTTTACTTACGTGGCATCTATGTTA 57.225 30.769 0.00 0.00 0.00 2.41
263 264 7.760131 TTTACTTACGTGGCATCTATGTTAC 57.240 36.000 0.00 0.00 0.00 2.50
264 265 5.593679 ACTTACGTGGCATCTATGTTACT 57.406 39.130 0.00 0.00 0.00 2.24
265 266 6.704289 ACTTACGTGGCATCTATGTTACTA 57.296 37.500 0.00 0.00 0.00 1.82
266 267 6.501781 ACTTACGTGGCATCTATGTTACTAC 58.498 40.000 0.00 0.00 0.00 2.73
267 268 4.317671 ACGTGGCATCTATGTTACTACC 57.682 45.455 0.00 0.00 0.00 3.18
268 269 3.958798 ACGTGGCATCTATGTTACTACCT 59.041 43.478 0.00 0.00 0.00 3.08
269 270 5.135383 ACGTGGCATCTATGTTACTACCTA 58.865 41.667 0.00 0.00 0.00 3.08
270 271 5.773680 ACGTGGCATCTATGTTACTACCTAT 59.226 40.000 0.00 0.00 0.00 2.57
271 272 6.944290 ACGTGGCATCTATGTTACTACCTATA 59.056 38.462 0.00 0.00 0.00 1.31
272 273 7.614583 ACGTGGCATCTATGTTACTACCTATAT 59.385 37.037 0.00 0.00 0.00 0.86
273 274 8.467598 CGTGGCATCTATGTTACTACCTATATT 58.532 37.037 0.00 0.00 0.00 1.28
288 289 8.114743 ACTACCTATATTACTCCCACTATGACC 58.885 40.741 0.00 0.00 0.00 4.02
289 290 6.871035 ACCTATATTACTCCCACTATGACCA 58.129 40.000 0.00 0.00 0.00 4.02
290 291 6.954684 ACCTATATTACTCCCACTATGACCAG 59.045 42.308 0.00 0.00 0.00 4.00
291 292 5.746990 ATATTACTCCCACTATGACCAGC 57.253 43.478 0.00 0.00 0.00 4.85
292 293 1.789523 TACTCCCACTATGACCAGCC 58.210 55.000 0.00 0.00 0.00 4.85
293 294 0.043334 ACTCCCACTATGACCAGCCT 59.957 55.000 0.00 0.00 0.00 4.58
294 295 1.207791 CTCCCACTATGACCAGCCTT 58.792 55.000 0.00 0.00 0.00 4.35
295 296 2.292918 ACTCCCACTATGACCAGCCTTA 60.293 50.000 0.00 0.00 0.00 2.69
296 297 2.771943 CTCCCACTATGACCAGCCTTAA 59.228 50.000 0.00 0.00 0.00 1.85
297 298 3.186283 TCCCACTATGACCAGCCTTAAA 58.814 45.455 0.00 0.00 0.00 1.52
298 299 3.199946 TCCCACTATGACCAGCCTTAAAG 59.800 47.826 0.00 0.00 0.00 1.85
299 300 3.199946 CCCACTATGACCAGCCTTAAAGA 59.800 47.826 0.00 0.00 0.00 2.52
300 301 4.141390 CCCACTATGACCAGCCTTAAAGAT 60.141 45.833 0.00 0.00 0.00 2.40
301 302 4.818546 CCACTATGACCAGCCTTAAAGATG 59.181 45.833 0.00 0.00 0.00 2.90
302 303 5.396772 CCACTATGACCAGCCTTAAAGATGA 60.397 44.000 0.00 0.00 0.00 2.92
303 304 5.525378 CACTATGACCAGCCTTAAAGATGAC 59.475 44.000 0.00 0.00 0.00 3.06
304 305 4.574674 ATGACCAGCCTTAAAGATGACA 57.425 40.909 0.00 0.00 0.00 3.58
305 306 4.574674 TGACCAGCCTTAAAGATGACAT 57.425 40.909 0.00 0.00 0.00 3.06
306 307 5.692115 TGACCAGCCTTAAAGATGACATA 57.308 39.130 0.00 0.00 0.00 2.29
312 313 7.451566 ACCAGCCTTAAAGATGACATAACTTTT 59.548 33.333 7.27 1.39 35.79 2.27
322 323 5.437289 TGACATAACTTTTGTGAAGCCAG 57.563 39.130 0.00 0.00 0.00 4.85
395 402 0.753262 CTTCCCCTATGTCGACCCAG 59.247 60.000 14.12 9.72 0.00 4.45
398 405 2.417516 CCTATGTCGACCCAGCCG 59.582 66.667 14.12 0.00 0.00 5.52
409 416 0.255890 ACCCAGCCGTGCATAGAAAT 59.744 50.000 0.00 0.00 0.00 2.17
484 498 1.202746 GGGACTACGATCGGGTAGACT 60.203 57.143 20.98 0.00 41.95 3.24
494 508 1.486310 TCGGGTAGACTACGCCTTCTA 59.514 52.381 20.48 2.74 38.28 2.10
497 511 3.493350 CGGGTAGACTACGCCTTCTACTA 60.493 52.174 20.48 0.00 42.62 1.82
499 513 4.694982 GGGTAGACTACGCCTTCTACTATC 59.305 50.000 16.79 0.00 42.62 2.08
504 518 5.543405 AGACTACGCCTTCTACTATCCTCTA 59.457 44.000 0.00 0.00 0.00 2.43
505 519 6.043012 AGACTACGCCTTCTACTATCCTCTAA 59.957 42.308 0.00 0.00 0.00 2.10
506 520 6.599445 ACTACGCCTTCTACTATCCTCTAAA 58.401 40.000 0.00 0.00 0.00 1.85
507 521 7.059156 ACTACGCCTTCTACTATCCTCTAAAA 58.941 38.462 0.00 0.00 0.00 1.52
508 522 6.786967 ACGCCTTCTACTATCCTCTAAAAA 57.213 37.500 0.00 0.00 0.00 1.94
770 831 2.429739 GCAAAGCAACAGCTCGCC 60.430 61.111 0.00 0.00 37.72 5.54
771 832 2.256461 CAAAGCAACAGCTCGCCC 59.744 61.111 0.00 0.00 37.72 6.13
772 833 2.113986 AAAGCAACAGCTCGCCCT 59.886 55.556 0.00 0.00 37.72 5.19
773 834 1.968540 AAAGCAACAGCTCGCCCTC 60.969 57.895 0.00 0.00 37.72 4.30
774 835 4.749310 AGCAACAGCTCGCCCTCG 62.749 66.667 0.00 0.00 31.68 4.63
812 873 2.979814 AAAAGGCAGCGGAAAGTTTT 57.020 40.000 0.00 0.00 0.00 2.43
823 884 0.599991 GAAAGTTTTGGGGCCGCTTG 60.600 55.000 21.80 0.00 0.00 4.01
824 885 2.658679 AAAGTTTTGGGGCCGCTTGC 62.659 55.000 21.80 8.55 40.16 4.01
825 886 3.615709 GTTTTGGGGCCGCTTGCT 61.616 61.111 21.80 0.00 40.92 3.91
826 887 3.302344 TTTTGGGGCCGCTTGCTC 61.302 61.111 21.80 0.00 40.99 4.26
952 1025 3.540751 CGCCCAGCCAGCTAGCTA 61.541 66.667 18.86 0.00 42.61 3.32
1256 1337 3.353836 ACGCGTCCGCTGCATTTT 61.354 55.556 5.58 0.00 39.32 1.82
1259 1340 1.499949 GCGTCCGCTGCATTTTACA 59.500 52.632 4.10 0.00 38.26 2.41
1260 1341 0.793104 GCGTCCGCTGCATTTTACAC 60.793 55.000 4.10 0.00 38.26 2.90
1261 1342 0.515127 CGTCCGCTGCATTTTACACA 59.485 50.000 0.00 0.00 0.00 3.72
1262 1343 1.724654 CGTCCGCTGCATTTTACACAC 60.725 52.381 0.00 0.00 0.00 3.82
1291 1372 2.182791 CGGCGATCTGCTGTGACT 59.817 61.111 0.00 0.00 45.38 3.41
1292 1373 1.875813 CGGCGATCTGCTGTGACTC 60.876 63.158 0.00 0.00 45.38 3.36
1293 1374 1.515020 GGCGATCTGCTGTGACTCT 59.485 57.895 8.94 0.00 45.43 3.24
1294 1375 0.805322 GGCGATCTGCTGTGACTCTG 60.805 60.000 8.94 0.00 45.43 3.35
1295 1376 0.172127 GCGATCTGCTGTGACTCTGA 59.828 55.000 0.00 0.00 41.73 3.27
1296 1377 1.798446 GCGATCTGCTGTGACTCTGAG 60.798 57.143 2.45 2.45 41.73 3.35
1297 1378 1.742268 CGATCTGCTGTGACTCTGAGA 59.258 52.381 12.44 0.00 0.00 3.27
1298 1379 2.223317 CGATCTGCTGTGACTCTGAGAG 60.223 54.545 12.44 8.15 35.52 3.20
1300 1381 1.202989 TCTGCTGTGACTCTGAGAGGT 60.203 52.381 14.83 0.00 33.35 3.85
1301 1382 0.964700 TGCTGTGACTCTGAGAGGTG 59.035 55.000 14.83 0.30 33.35 4.00
1302 1383 0.965439 GCTGTGACTCTGAGAGGTGT 59.035 55.000 14.83 0.00 33.35 4.16
1303 1384 1.067915 GCTGTGACTCTGAGAGGTGTC 60.068 57.143 14.83 3.92 33.35 3.67
1304 1385 2.513753 CTGTGACTCTGAGAGGTGTCT 58.486 52.381 14.83 0.00 33.35 3.41
1305 1386 2.228582 CTGTGACTCTGAGAGGTGTCTG 59.771 54.545 14.83 2.31 33.35 3.51
1306 1387 2.235016 GTGACTCTGAGAGGTGTCTGT 58.765 52.381 14.83 0.00 33.35 3.41
1307 1388 2.227865 GTGACTCTGAGAGGTGTCTGTC 59.772 54.545 14.83 1.69 33.35 3.51
1308 1389 2.107378 TGACTCTGAGAGGTGTCTGTCT 59.893 50.000 14.83 0.00 34.70 3.41
1309 1390 2.487762 GACTCTGAGAGGTGTCTGTCTG 59.512 54.545 14.83 0.00 34.70 3.51
1310 1391 1.818060 CTCTGAGAGGTGTCTGTCTGG 59.182 57.143 0.36 0.00 34.70 3.86
1311 1392 0.246086 CTGAGAGGTGTCTGTCTGGC 59.754 60.000 0.00 0.00 34.70 4.85
1312 1393 0.178950 TGAGAGGTGTCTGTCTGGCT 60.179 55.000 0.00 0.00 34.70 4.75
1313 1394 0.530288 GAGAGGTGTCTGTCTGGCTC 59.470 60.000 0.00 0.00 30.97 4.70
1314 1395 0.902516 AGAGGTGTCTGTCTGGCTCC 60.903 60.000 0.00 0.00 34.37 4.70
1315 1396 1.893919 GAGGTGTCTGTCTGGCTCCC 61.894 65.000 0.00 0.00 34.69 4.30
1316 1397 2.262915 GTGTCTGTCTGGCTCCCG 59.737 66.667 0.00 0.00 0.00 5.14
1395 1476 2.042831 GCTCCTCGCCAATGTGCTT 61.043 57.895 0.00 0.00 0.00 3.91
1518 1599 1.342374 GGTCAAATTCCCAGCTCCCAT 60.342 52.381 0.00 0.00 0.00 4.00
1559 1654 4.628661 AAGACCCTCCATTCCTAGTACT 57.371 45.455 0.00 0.00 0.00 2.73
1560 1655 5.745988 AAGACCCTCCATTCCTAGTACTA 57.254 43.478 1.89 1.89 0.00 1.82
1561 1656 5.064314 AGACCCTCCATTCCTAGTACTAC 57.936 47.826 0.00 0.00 0.00 2.73
1562 1657 4.732957 AGACCCTCCATTCCTAGTACTACT 59.267 45.833 0.00 0.00 0.00 2.57
1563 1658 5.915900 AGACCCTCCATTCCTAGTACTACTA 59.084 44.000 0.00 0.00 0.00 1.82
1564 1659 5.951204 ACCCTCCATTCCTAGTACTACTAC 58.049 45.833 0.00 0.00 0.00 2.73
1565 1660 5.675884 ACCCTCCATTCCTAGTACTACTACT 59.324 44.000 0.00 0.00 37.04 2.57
1566 1661 6.853983 ACCCTCCATTCCTAGTACTACTACTA 59.146 42.308 0.00 0.00 34.79 1.82
1567 1662 7.017452 ACCCTCCATTCCTAGTACTACTACTAG 59.983 44.444 0.00 8.76 46.90 2.57
1618 1730 0.883833 CAGCTTGGGTGGTCATCAAC 59.116 55.000 0.00 0.00 0.00 3.18
1649 1762 3.200593 GGCCATGCTCTCGTGCTG 61.201 66.667 0.00 0.00 0.00 4.41
1809 1922 2.952310 GTGTTCTTGAAGCAGAGGGTTT 59.048 45.455 0.00 0.00 34.25 3.27
1820 1933 6.882678 TGAAGCAGAGGGTTTAATTTACTACC 59.117 38.462 0.00 0.00 34.25 3.18
1903 2019 4.622701 AAGCATTAATTCCGTTGCTCTC 57.377 40.909 0.00 0.00 44.26 3.20
1911 2027 2.662006 TCCGTTGCTCTCTTCATGAG 57.338 50.000 0.00 0.00 43.96 2.90
1938 2054 3.679980 TGTCGCTGCTTCTTATCACTTTC 59.320 43.478 0.00 0.00 0.00 2.62
1943 2059 4.094146 GCTGCTTCTTATCACTTTCTGGTC 59.906 45.833 0.00 0.00 0.00 4.02
2044 2160 5.368256 TTGCTCTTCATCTTTTGCTTCTC 57.632 39.130 0.00 0.00 0.00 2.87
2137 2254 9.453572 TTCATGACTTTGAAAAGATGTAGCTAT 57.546 29.630 9.71 0.00 39.31 2.97
2185 2302 7.492352 ACTGATTTGACTTGTACCAAGTTAC 57.508 36.000 10.66 0.89 0.00 2.50
2188 2305 8.597662 TGATTTGACTTGTACCAAGTTACTAC 57.402 34.615 10.66 4.93 0.00 2.73
2212 2329 5.616866 CGCGTAGAATTTTCATTTGGTGACT 60.617 40.000 0.00 0.00 36.32 3.41
2298 2415 5.378230 AATCTGCAGGGACTAATGAATCA 57.622 39.130 15.13 0.00 36.02 2.57
2343 2464 7.614124 TTTTTGTTTAGAACGACACTTACCT 57.386 32.000 0.00 0.00 0.00 3.08
2344 2465 7.614124 TTTTGTTTAGAACGACACTTACCTT 57.386 32.000 0.00 0.00 0.00 3.50
2346 2467 7.614124 TTGTTTAGAACGACACTTACCTTTT 57.386 32.000 0.00 0.00 0.00 2.27
2393 2516 2.428890 AGTGCCTACTCTACATGCTGTC 59.571 50.000 0.00 0.00 28.79 3.51
2412 2535 0.040157 CGAGTGTTCACCGTTCGGTA 60.040 55.000 16.51 0.00 36.64 4.02
2434 2557 3.242712 AGTTCATTTCAAAACTTTGCGCG 59.757 39.130 0.00 0.00 38.05 6.86
2545 2669 3.147553 AGCTTGACCCTTCTTTCCTTC 57.852 47.619 0.00 0.00 0.00 3.46
2554 2678 2.232208 CCTTCTTTCCTTCATTGCCCAC 59.768 50.000 0.00 0.00 0.00 4.61
2682 2806 6.037610 GCAGATCAAGGTACAATGTCCTAAAG 59.962 42.308 5.13 0.93 33.27 1.85
2683 2807 7.106239 CAGATCAAGGTACAATGTCCTAAAGT 58.894 38.462 5.13 0.00 33.27 2.66
2684 2808 7.607991 CAGATCAAGGTACAATGTCCTAAAGTT 59.392 37.037 5.13 0.00 33.27 2.66
2743 2867 7.739498 AAACGTCACAATAAAAGTGATAGGT 57.261 32.000 0.00 0.00 46.52 3.08
2759 2883 6.829811 AGTGATAGGTACCAGAAGTTCTACTC 59.170 42.308 15.94 0.00 0.00 2.59
2781 2905 7.254852 ACTCTCTGAATATTCTCGTTGTCTTC 58.745 38.462 16.24 0.00 0.00 2.87
2806 2930 8.836413 TCGTCATCTTTATTTTCTTGTCACTTT 58.164 29.630 0.00 0.00 0.00 2.66
2847 2971 8.402798 TGTGTAAATTTGATAGACATTGGTGT 57.597 30.769 0.00 0.00 42.49 4.16
2849 2973 9.341899 GTGTAAATTTGATAGACATTGGTGTTC 57.658 33.333 0.00 0.00 39.09 3.18
2850 2974 9.295825 TGTAAATTTGATAGACATTGGTGTTCT 57.704 29.630 0.00 0.00 39.09 3.01
2851 2975 9.559958 GTAAATTTGATAGACATTGGTGTTCTG 57.440 33.333 0.00 0.00 39.09 3.02
2852 2976 5.627499 TTTGATAGACATTGGTGTTCTGC 57.373 39.130 0.00 0.00 39.09 4.26
2853 2977 4.284829 TGATAGACATTGGTGTTCTGCA 57.715 40.909 0.00 0.00 39.09 4.41
2855 2979 4.455533 TGATAGACATTGGTGTTCTGCAAC 59.544 41.667 0.00 0.00 39.09 4.17
2856 2980 1.603802 AGACATTGGTGTTCTGCAACG 59.396 47.619 0.00 0.00 39.09 4.10
2928 3058 9.577110 TCCTAGTTCTATTTTGTGTATTGTACG 57.423 33.333 0.00 0.00 0.00 3.67
2941 3071 7.259882 TGTGTATTGTACGGAAAAGATACGAT 58.740 34.615 0.00 0.00 0.00 3.73
3014 3144 9.202273 GGTTCACAAATAGTTCATATTTTTGCA 57.798 29.630 0.00 0.00 41.25 4.08
3062 3200 1.617850 GGCACATCCACACAAAATCCA 59.382 47.619 0.00 0.00 34.01 3.41
3071 3209 4.402155 TCCACACAAAATCCATATTGCCTC 59.598 41.667 0.00 0.00 0.00 4.70
3128 3266 2.625790 GCCTGTACCCATGTGTGAAAAA 59.374 45.455 0.00 0.00 0.00 1.94
3131 3269 4.082245 CCTGTACCCATGTGTGAAAAATCC 60.082 45.833 0.00 0.00 0.00 3.01
3139 3277 4.582701 TGTGTGAAAAATCCGCATTCTT 57.417 36.364 0.00 0.00 0.00 2.52
3140 3278 4.297510 TGTGTGAAAAATCCGCATTCTTG 58.702 39.130 0.00 0.00 0.00 3.02
3155 3293 8.784994 TCCGCATTCTTGTAATAAAGTGTTTTA 58.215 29.630 0.00 0.00 33.54 1.52
3156 3294 9.567848 CCGCATTCTTGTAATAAAGTGTTTTAT 57.432 29.630 0.00 0.00 40.37 1.40
3220 3360 6.656632 AATGCTTGCTACAGCTATCTAGTA 57.343 37.500 2.44 0.00 40.79 1.82
3234 3374 3.996921 TCTAGTACTGGAGGTCGTCTT 57.003 47.619 4.58 0.00 0.00 3.01
3273 3413 0.899717 TTTGGGATGCCTTGACTGCC 60.900 55.000 4.35 0.00 0.00 4.85
3353 3493 4.131596 GTCAAAGTACAGCCACTTAACCA 58.868 43.478 0.00 0.00 37.78 3.67
3363 3503 4.520492 CAGCCACTTAACCACTCATTTCTT 59.480 41.667 0.00 0.00 0.00 2.52
3364 3504 5.705441 CAGCCACTTAACCACTCATTTCTTA 59.295 40.000 0.00 0.00 0.00 2.10
3368 3508 6.375455 CCACTTAACCACTCATTTCTTAGCAT 59.625 38.462 0.00 0.00 0.00 3.79
3377 3517 6.595326 CACTCATTTCTTAGCATACAACCTGA 59.405 38.462 0.00 0.00 0.00 3.86
3559 3701 1.534729 GAAAGAAGGCACGGAATGGT 58.465 50.000 0.00 0.00 0.00 3.55
3615 3757 4.758688 AGAACATCAGACACATTATCGCA 58.241 39.130 0.00 0.00 0.00 5.10
3628 3770 3.378911 TTATCGCATGCTGATACGGAA 57.621 42.857 22.97 13.14 0.00 4.30
3673 3815 2.092699 GGAGGAAGTCTTTGAGGATGGG 60.093 54.545 0.00 0.00 0.00 4.00
3713 3855 4.503714 TGGTATGTTCCCTTTCTCCATC 57.496 45.455 0.00 0.00 0.00 3.51
3715 3857 2.044123 ATGTTCCCTTTCTCCATCGC 57.956 50.000 0.00 0.00 0.00 4.58
3800 3942 5.613329 ACAATAACTCGTACTTGGGAAACA 58.387 37.500 0.00 0.00 0.00 2.83
3801 3943 5.467735 ACAATAACTCGTACTTGGGAAACAC 59.532 40.000 0.00 0.00 0.00 3.32
3802 3944 3.832615 AACTCGTACTTGGGAAACACT 57.167 42.857 0.00 0.00 0.00 3.55
3803 3945 3.832615 ACTCGTACTTGGGAAACACTT 57.167 42.857 0.00 0.00 0.00 3.16
3804 3946 3.725490 ACTCGTACTTGGGAAACACTTC 58.275 45.455 0.00 0.00 0.00 3.01
3814 3956 2.608268 GGAAACACTTCCTCGCTACTC 58.392 52.381 0.00 0.00 46.80 2.59
3817 3959 0.522180 ACACTTCCTCGCTACTCGTG 59.478 55.000 0.00 0.00 39.67 4.35
3818 3960 0.798771 CACTTCCTCGCTACTCGTGC 60.799 60.000 0.00 0.00 39.67 5.34
3819 3961 0.961358 ACTTCCTCGCTACTCGTGCT 60.961 55.000 0.00 0.00 39.67 4.40
3820 3962 1.015109 CTTCCTCGCTACTCGTGCTA 58.985 55.000 0.00 0.00 39.67 3.49
3821 3963 1.400846 CTTCCTCGCTACTCGTGCTAA 59.599 52.381 0.00 0.00 39.67 3.09
3822 3964 1.456296 TCCTCGCTACTCGTGCTAAA 58.544 50.000 0.00 0.00 39.67 1.85
3823 3965 1.131883 TCCTCGCTACTCGTGCTAAAC 59.868 52.381 0.00 0.00 39.67 2.01
3825 3967 2.353889 CCTCGCTACTCGTGCTAAACTA 59.646 50.000 0.00 0.00 39.67 2.24
3826 3968 3.181503 CCTCGCTACTCGTGCTAAACTAA 60.182 47.826 0.00 0.00 39.67 2.24
3830 4017 5.295292 TCGCTACTCGTGCTAAACTAATAGT 59.705 40.000 0.00 0.00 39.67 2.12
3848 4035 9.032624 ACTAATAGTAGTGGTTTAGCTTTCTGA 57.967 33.333 1.27 0.00 39.20 3.27
3857 4044 9.515226 AGTGGTTTAGCTTTCTGATAATTTGTA 57.485 29.630 0.00 0.00 0.00 2.41
3865 4052 8.790718 AGCTTTCTGATAATTTGTATATGCTGG 58.209 33.333 0.00 0.00 0.00 4.85
3866 4053 8.786898 GCTTTCTGATAATTTGTATATGCTGGA 58.213 33.333 0.00 0.00 0.00 3.86
3907 4172 4.699637 TGTTAGATTCTGTGACAACGGTT 58.300 39.130 0.00 0.00 34.03 4.44
3913 4178 1.202639 TCTGTGACAACGGTTGATGCT 60.203 47.619 26.39 4.61 34.03 3.79
3956 4221 5.964758 TCATTTTGATTGAGCATTGGGTAC 58.035 37.500 0.00 0.00 0.00 3.34
3996 4261 4.457466 ACACCTTAACATCCAACGAAACT 58.543 39.130 0.00 0.00 0.00 2.66
4039 4304 2.508300 AGTCAGGTTGGTACAGGTGTTT 59.492 45.455 0.00 0.00 42.39 2.83
4045 4310 3.275999 GTTGGTACAGGTGTTTCTGTGT 58.724 45.455 7.65 0.00 46.29 3.72
4048 4313 5.100344 TGGTACAGGTGTTTCTGTGTTTA 57.900 39.130 7.65 0.00 46.29 2.01
4051 4316 2.949644 ACAGGTGTTTCTGTGTTTAGGC 59.050 45.455 0.00 0.00 45.27 3.93
4054 4319 5.003804 CAGGTGTTTCTGTGTTTAGGCTAT 58.996 41.667 0.00 0.00 0.00 2.97
4064 4329 7.041721 TCTGTGTTTAGGCTATCACATGTTAG 58.958 38.462 23.36 15.73 39.51 2.34
4075 4340 8.028938 GGCTATCACATGTTAGATTTGTGTTTT 58.971 33.333 8.47 0.00 41.14 2.43
4107 4372 9.233232 GTACATTTGGCTAGCATTACATTTTAC 57.767 33.333 18.24 2.84 0.00 2.01
4162 4427 8.782339 TTATTATTTTAGGGCGCTATACTTCC 57.218 34.615 11.75 0.00 0.00 3.46
4316 4581 5.418840 GGTTCCACCATAGATTGACAACAAT 59.581 40.000 0.00 0.00 42.53 2.71
4317 4582 6.601613 GGTTCCACCATAGATTGACAACAATA 59.398 38.462 0.00 0.00 41.23 1.90
4391 4656 9.525409 AAACATCAAAAGAGAAAGAAATGTCAG 57.475 29.630 0.00 0.00 0.00 3.51
4424 4689 5.998981 TCCTAAACTTATGGCGAAAGTTCAA 59.001 36.000 14.88 7.86 44.35 2.69
4483 5344 4.718961 ACCTTGAACTATTGAAGCTGTGT 58.281 39.130 0.00 0.00 0.00 3.72
4735 5597 1.313091 GGGATGGTCCGTTCCTTTGC 61.313 60.000 0.31 0.00 37.43 3.68
4750 5612 1.108727 TTTGCCACAGTTGCCAGGAG 61.109 55.000 0.00 0.00 0.00 3.69
4808 5672 5.800941 CGCGGTATTATATCTTCCACTCTTC 59.199 44.000 0.00 0.00 0.00 2.87
4812 5676 8.024285 CGGTATTATATCTTCCACTCTTCTGAC 58.976 40.741 0.00 0.00 0.00 3.51
4819 5683 6.688073 TCTTCCACTCTTCTGACCTATTTT 57.312 37.500 0.00 0.00 0.00 1.82
4824 5688 5.123027 CCACTCTTCTGACCTATTTTTCAGC 59.877 44.000 0.00 0.00 39.36 4.26
4825 5689 5.123027 CACTCTTCTGACCTATTTTTCAGCC 59.877 44.000 0.00 0.00 39.36 4.85
4922 5786 1.280421 ACCAAGGGCAAGAGTCATCTC 59.720 52.381 0.00 0.00 40.70 2.75
4923 5787 1.407989 CCAAGGGCAAGAGTCATCTCC 60.408 57.143 0.00 0.00 41.26 3.71
4924 5788 0.539051 AAGGGCAAGAGTCATCTCCG 59.461 55.000 0.00 0.00 41.26 4.63
4925 5789 1.144936 GGGCAAGAGTCATCTCCGG 59.855 63.158 0.00 0.00 41.26 5.14
4958 5822 3.075866 ACGATATTCCGAAAGACCGAC 57.924 47.619 0.00 0.00 0.00 4.79
4978 5842 0.449388 GCATAGCTGACACTTGGCAC 59.551 55.000 0.00 0.00 0.00 5.01
5037 5901 7.353414 TGGAGTTAGGATCTAAGATGAACAG 57.647 40.000 0.00 0.00 0.00 3.16
5045 5909 6.556495 AGGATCTAAGATGAACAGCTGGATTA 59.444 38.462 19.93 3.54 0.00 1.75
5047 5911 7.387397 GGATCTAAGATGAACAGCTGGATTAAG 59.613 40.741 19.93 5.07 0.00 1.85
5073 5953 1.239347 GGAGGGACTTGTGTTGAAGC 58.761 55.000 0.00 0.00 41.55 3.86
5083 5963 0.527385 GTGTTGAAGCGCCAAAGCAA 60.527 50.000 2.29 0.00 39.83 3.91
5103 5983 4.092091 GCAAAAGATACTCCTCGTCTTGTG 59.908 45.833 0.00 0.00 39.24 3.33
5164 6045 1.722034 TCAGTGGGCTTTCTCTCAGT 58.278 50.000 0.00 0.00 0.00 3.41
5165 6046 1.345741 TCAGTGGGCTTTCTCTCAGTG 59.654 52.381 0.00 0.00 33.29 3.66
5166 6047 0.689623 AGTGGGCTTTCTCTCAGTGG 59.310 55.000 0.00 0.00 0.00 4.00
5167 6048 0.957888 GTGGGCTTTCTCTCAGTGGC 60.958 60.000 0.00 0.00 0.00 5.01
5168 6049 1.743252 GGGCTTTCTCTCAGTGGCG 60.743 63.158 0.00 0.00 0.00 5.69
5169 6050 1.743252 GGCTTTCTCTCAGTGGCGG 60.743 63.158 0.00 0.00 0.00 6.13
5170 6051 2.394563 GCTTTCTCTCAGTGGCGGC 61.395 63.158 0.00 0.00 0.00 6.53
5175 6056 3.430565 CTCTCAGTGGCGGCGCATA 62.431 63.158 34.36 19.28 0.00 3.14
5176 6057 2.511373 CTCAGTGGCGGCGCATAA 60.511 61.111 34.36 15.87 0.00 1.90
5177 6058 2.046796 TCAGTGGCGGCGCATAAA 60.047 55.556 34.36 13.06 0.00 1.40
5178 6059 2.100216 CAGTGGCGGCGCATAAAC 59.900 61.111 34.36 23.57 0.00 2.01
5180 6061 2.100216 GTGGCGGCGCATAAACAG 59.900 61.111 34.36 0.00 0.00 3.16
5181 6062 3.130819 TGGCGGCGCATAAACAGG 61.131 61.111 34.36 0.00 0.00 4.00
5182 6063 2.822255 GGCGGCGCATAAACAGGA 60.822 61.111 34.36 0.00 0.00 3.86
5183 6064 2.403586 GCGGCGCATAAACAGGAC 59.596 61.111 29.21 0.00 0.00 3.85
5184 6065 2.701006 CGGCGCATAAACAGGACG 59.299 61.111 10.83 0.00 0.00 4.79
5185 6066 1.807981 CGGCGCATAAACAGGACGA 60.808 57.895 10.83 0.00 0.00 4.20
5187 6068 0.373716 GGCGCATAAACAGGACGAAG 59.626 55.000 10.83 0.00 0.00 3.79
5188 6069 0.373716 GCGCATAAACAGGACGAAGG 59.626 55.000 0.30 0.00 0.00 3.46
5189 6070 0.373716 CGCATAAACAGGACGAAGGC 59.626 55.000 0.00 0.00 0.00 4.35
5209 6090 1.468736 CGTGTTAACGGCTACCTCTCC 60.469 57.143 0.26 0.00 46.25 3.71
5210 6091 1.823610 GTGTTAACGGCTACCTCTCCT 59.176 52.381 0.26 0.00 0.00 3.69
5211 6092 3.019564 GTGTTAACGGCTACCTCTCCTA 58.980 50.000 0.26 0.00 0.00 2.94
5212 6093 3.445096 GTGTTAACGGCTACCTCTCCTAA 59.555 47.826 0.26 0.00 0.00 2.69
5213 6094 3.698040 TGTTAACGGCTACCTCTCCTAAG 59.302 47.826 0.26 0.00 0.00 2.18
5214 6095 1.777941 AACGGCTACCTCTCCTAAGG 58.222 55.000 0.00 0.00 42.55 2.69
5222 6103 0.827368 CCTCTCCTAAGGTCAGCCAC 59.173 60.000 0.00 0.00 37.19 5.01
5265 6146 3.564027 GCGTGACACATAGCCGCC 61.564 66.667 6.37 0.00 38.52 6.13
5340 6221 5.189180 GGCAGATCTGAATTAAGGTCACTT 58.811 41.667 27.04 0.00 40.74 3.16
5348 6229 0.035739 TTAAGGTCACTTGGCCCGTC 59.964 55.000 0.00 0.00 41.83 4.79
5367 6248 0.035056 CCCCTATCGGAATCATGCCC 60.035 60.000 0.00 0.00 0.00 5.36
5370 6251 1.432514 CTATCGGAATCATGCCCGTG 58.567 55.000 16.61 8.13 45.48 4.94
5465 6346 5.073965 TCTTTGTACCCCTGTATTCCTTGTT 59.926 40.000 0.00 0.00 0.00 2.83
5512 6393 4.378253 CGGCTGGCAAAATTTATGGTTTTG 60.378 41.667 1.08 6.90 45.01 2.44
5518 6399 7.954788 GGCAAAATTTATGGTTTTGACTGTA 57.045 32.000 13.65 0.00 46.24 2.74
5550 6432 4.105217 TGACAATATGGGCAAGAGGATGAT 59.895 41.667 0.00 0.00 0.00 2.45
5580 6462 0.591170 CTTGTTTGCCCAGTACACGG 59.409 55.000 0.00 0.00 0.00 4.94
5603 6485 5.335976 GGTGCTTAATTTAGATGGCCATAGC 60.336 44.000 20.84 20.93 38.76 2.97
5629 6511 2.633481 GCTGATAATTCCTCTACCCGGT 59.367 50.000 0.00 0.00 0.00 5.28
5630 6512 3.306156 GCTGATAATTCCTCTACCCGGTC 60.306 52.174 0.00 0.00 0.00 4.79
5631 6513 2.889045 TGATAATTCCTCTACCCGGTCG 59.111 50.000 0.00 0.00 0.00 4.79
5632 6514 1.035139 TAATTCCTCTACCCGGTCGC 58.965 55.000 0.00 0.00 0.00 5.19
5633 6515 1.683418 AATTCCTCTACCCGGTCGCC 61.683 60.000 0.00 0.00 0.00 5.54
5654 6538 2.704572 GGATTGCTCAGCACTACAGTT 58.295 47.619 0.00 0.00 38.71 3.16
5657 6541 2.445565 TGCTCAGCACTACAGTTCAG 57.554 50.000 0.00 0.00 31.71 3.02
5658 6542 1.074752 GCTCAGCACTACAGTTCAGC 58.925 55.000 0.00 0.00 0.00 4.26
5678 6562 2.038033 GCCTGTGTTACACTTGTAGGGA 59.962 50.000 16.79 0.00 35.11 4.20
5693 6577 5.975693 TGTAGGGATGTTTGAATTGGTTC 57.024 39.130 0.00 0.00 34.85 3.62
5758 6642 0.247736 TGGCGCCTCTTCTTTCTCTC 59.752 55.000 29.70 0.00 0.00 3.20
5759 6643 0.534873 GGCGCCTCTTCTTTCTCTCT 59.465 55.000 22.15 0.00 0.00 3.10
5760 6644 1.470805 GGCGCCTCTTCTTTCTCTCTC 60.471 57.143 22.15 0.00 0.00 3.20
5761 6645 1.476488 GCGCCTCTTCTTTCTCTCTCT 59.524 52.381 0.00 0.00 0.00 3.10
5762 6646 2.479560 GCGCCTCTTCTTTCTCTCTCTC 60.480 54.545 0.00 0.00 0.00 3.20
5763 6647 3.016736 CGCCTCTTCTTTCTCTCTCTCT 58.983 50.000 0.00 0.00 0.00 3.10
5790 6708 1.067142 ACACTAGCGCCTCAATCGAAA 60.067 47.619 2.29 0.00 0.00 3.46
5795 6713 1.131126 AGCGCCTCAATCGAAACATTG 59.869 47.619 2.29 0.00 35.39 2.82
5811 6729 2.033299 ACATTGACCTGAAAACACGCAG 59.967 45.455 0.00 0.00 0.00 5.18
5821 6739 4.475028 TGAAAACACGCAGATGCTAAATG 58.525 39.130 2.95 0.00 39.32 2.32
5826 6744 4.475944 ACACGCAGATGCTAAATGAAAAC 58.524 39.130 2.95 0.00 39.32 2.43
5827 6745 3.853671 CACGCAGATGCTAAATGAAAACC 59.146 43.478 2.95 0.00 39.32 3.27
5829 6747 3.734902 CGCAGATGCTAAATGAAAACCCC 60.735 47.826 2.95 0.00 39.32 4.95
5834 6752 5.779771 AGATGCTAAATGAAAACCCCTGAAA 59.220 36.000 0.00 0.00 0.00 2.69
5835 6753 5.878406 TGCTAAATGAAAACCCCTGAAAA 57.122 34.783 0.00 0.00 0.00 2.29
5836 6754 6.432403 TGCTAAATGAAAACCCCTGAAAAT 57.568 33.333 0.00 0.00 0.00 1.82
5837 6755 7.546250 TGCTAAATGAAAACCCCTGAAAATA 57.454 32.000 0.00 0.00 0.00 1.40
5838 6756 7.382898 TGCTAAATGAAAACCCCTGAAAATAC 58.617 34.615 0.00 0.00 0.00 1.89
5839 6757 6.530181 GCTAAATGAAAACCCCTGAAAATACG 59.470 38.462 0.00 0.00 0.00 3.06
5840 6758 3.926821 TGAAAACCCCTGAAAATACGC 57.073 42.857 0.00 0.00 0.00 4.42
5841 6759 3.223435 TGAAAACCCCTGAAAATACGCA 58.777 40.909 0.00 0.00 0.00 5.24
5842 6760 3.254657 TGAAAACCCCTGAAAATACGCAG 59.745 43.478 0.00 0.00 0.00 5.18
5869 6787 1.956170 CAACCGTCTCTGCACGCTT 60.956 57.895 0.00 0.00 38.52 4.68
5871 6789 2.356313 CCGTCTCTGCACGCTTGT 60.356 61.111 0.00 0.00 38.52 3.16
5872 6790 1.080772 CCGTCTCTGCACGCTTGTA 60.081 57.895 0.00 0.00 38.52 2.41
5873 6791 0.458543 CCGTCTCTGCACGCTTGTAT 60.459 55.000 0.00 0.00 38.52 2.29
5874 6792 1.350193 CGTCTCTGCACGCTTGTATT 58.650 50.000 0.00 0.00 31.96 1.89
5916 6834 4.161377 AGGTTATCTTCAGTTCCTGCTCTC 59.839 45.833 0.00 0.00 0.00 3.20
5921 6839 1.447489 CAGTTCCTGCTCTCTGCGG 60.447 63.158 0.00 0.00 46.63 5.69
5940 6858 1.068541 GGTGGCGTTTTGACCAGATTC 60.069 52.381 0.00 0.00 36.38 2.52
5945 6863 3.751698 GGCGTTTTGACCAGATTCTAACT 59.248 43.478 0.00 0.00 0.00 2.24
5955 6873 5.560724 ACCAGATTCTAACTTTAGCAGCAA 58.439 37.500 0.00 0.00 0.00 3.91
5978 6896 2.618241 TGAAATCTTTGCAGAACACGCT 59.382 40.909 0.00 0.00 30.76 5.07
5983 6901 1.802960 CTTTGCAGAACACGCTCATCT 59.197 47.619 0.00 0.00 0.00 2.90
5985 6903 2.741759 TGCAGAACACGCTCATCTAA 57.258 45.000 0.00 0.00 0.00 2.10
5986 6904 2.337583 TGCAGAACACGCTCATCTAAC 58.662 47.619 0.00 0.00 0.00 2.34
5989 6907 3.433615 GCAGAACACGCTCATCTAACTTT 59.566 43.478 0.00 0.00 0.00 2.66
5990 6908 4.434857 GCAGAACACGCTCATCTAACTTTC 60.435 45.833 0.00 0.00 0.00 2.62
5991 6909 4.686091 CAGAACACGCTCATCTAACTTTCA 59.314 41.667 0.00 0.00 0.00 2.69
5992 6910 4.686554 AGAACACGCTCATCTAACTTTCAC 59.313 41.667 0.00 0.00 0.00 3.18
5993 6911 2.987149 ACACGCTCATCTAACTTTCACG 59.013 45.455 0.00 0.00 0.00 4.35
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 20 9.788960 CTAGCTTTTGTTCTAAGTCAAAGTTTT 57.211 29.630 0.00 0.00 35.47 2.43
20 21 9.174166 TCTAGCTTTTGTTCTAAGTCAAAGTTT 57.826 29.630 0.00 0.00 35.47 2.66
21 22 8.732746 TCTAGCTTTTGTTCTAAGTCAAAGTT 57.267 30.769 0.00 0.00 35.47 2.66
22 23 8.732746 TTCTAGCTTTTGTTCTAAGTCAAAGT 57.267 30.769 0.00 0.00 35.47 2.66
23 24 8.831550 ACTTCTAGCTTTTGTTCTAAGTCAAAG 58.168 33.333 0.00 0.00 35.47 2.77
24 25 8.732746 ACTTCTAGCTTTTGTTCTAAGTCAAA 57.267 30.769 0.00 0.00 32.75 2.69
25 26 9.257651 GTACTTCTAGCTTTTGTTCTAAGTCAA 57.742 33.333 0.00 0.00 0.00 3.18
26 27 8.418662 TGTACTTCTAGCTTTTGTTCTAAGTCA 58.581 33.333 0.00 0.00 0.00 3.41
27 28 8.701540 GTGTACTTCTAGCTTTTGTTCTAAGTC 58.298 37.037 0.00 0.00 0.00 3.01
28 29 8.422566 AGTGTACTTCTAGCTTTTGTTCTAAGT 58.577 33.333 0.00 0.00 0.00 2.24
29 30 8.819643 AGTGTACTTCTAGCTTTTGTTCTAAG 57.180 34.615 0.00 0.00 0.00 2.18
32 33 9.780186 AATAAGTGTACTTCTAGCTTTTGTTCT 57.220 29.630 0.00 0.00 37.40 3.01
34 35 8.709646 CGAATAAGTGTACTTCTAGCTTTTGTT 58.290 33.333 0.00 0.00 37.40 2.83
35 36 7.148623 GCGAATAAGTGTACTTCTAGCTTTTGT 60.149 37.037 0.00 0.00 37.40 2.83
36 37 7.174082 GCGAATAAGTGTACTTCTAGCTTTTG 58.826 38.462 0.00 0.00 37.40 2.44
37 38 6.034683 CGCGAATAAGTGTACTTCTAGCTTTT 59.965 38.462 0.00 0.00 37.40 2.27
38 39 5.515626 CGCGAATAAGTGTACTTCTAGCTTT 59.484 40.000 0.00 0.00 37.40 3.51
39 40 5.035443 CGCGAATAAGTGTACTTCTAGCTT 58.965 41.667 0.00 0.00 37.40 3.74
40 41 4.497674 CCGCGAATAAGTGTACTTCTAGCT 60.498 45.833 8.23 0.00 37.40 3.32
41 42 3.729716 CCGCGAATAAGTGTACTTCTAGC 59.270 47.826 8.23 3.15 37.40 3.42
42 43 4.968788 GTCCGCGAATAAGTGTACTTCTAG 59.031 45.833 8.23 0.00 37.40 2.43
43 44 4.395854 TGTCCGCGAATAAGTGTACTTCTA 59.604 41.667 8.23 0.00 37.40 2.10
44 45 3.192001 TGTCCGCGAATAAGTGTACTTCT 59.808 43.478 8.23 0.00 37.40 2.85
45 46 3.504863 TGTCCGCGAATAAGTGTACTTC 58.495 45.455 8.23 0.00 37.40 3.01
46 47 3.192001 TCTGTCCGCGAATAAGTGTACTT 59.808 43.478 8.23 2.51 39.85 2.24
47 48 2.751259 TCTGTCCGCGAATAAGTGTACT 59.249 45.455 8.23 0.00 0.00 2.73
48 49 3.106672 CTCTGTCCGCGAATAAGTGTAC 58.893 50.000 8.23 0.00 0.00 2.90
49 50 2.098607 CCTCTGTCCGCGAATAAGTGTA 59.901 50.000 8.23 0.00 0.00 2.90
50 51 1.135083 CCTCTGTCCGCGAATAAGTGT 60.135 52.381 8.23 0.00 0.00 3.55
51 52 1.560923 CCTCTGTCCGCGAATAAGTG 58.439 55.000 8.23 0.37 0.00 3.16
52 53 0.460311 CCCTCTGTCCGCGAATAAGT 59.540 55.000 8.23 0.00 0.00 2.24
53 54 0.744874 TCCCTCTGTCCGCGAATAAG 59.255 55.000 8.23 0.00 0.00 1.73
54 55 0.744874 CTCCCTCTGTCCGCGAATAA 59.255 55.000 8.23 0.00 0.00 1.40
55 56 0.395311 ACTCCCTCTGTCCGCGAATA 60.395 55.000 8.23 0.00 0.00 1.75
56 57 0.395311 TACTCCCTCTGTCCGCGAAT 60.395 55.000 8.23 0.00 0.00 3.34
57 58 0.395311 ATACTCCCTCTGTCCGCGAA 60.395 55.000 8.23 0.00 0.00 4.70
58 59 1.101635 CATACTCCCTCTGTCCGCGA 61.102 60.000 8.23 0.00 0.00 5.87
59 60 1.360551 CATACTCCCTCTGTCCGCG 59.639 63.158 0.00 0.00 0.00 6.46
60 61 0.824759 AACATACTCCCTCTGTCCGC 59.175 55.000 0.00 0.00 0.00 5.54
61 62 3.288964 AGTAACATACTCCCTCTGTCCG 58.711 50.000 0.00 0.00 32.47 4.79
62 63 4.583907 GGTAGTAACATACTCCCTCTGTCC 59.416 50.000 0.00 0.00 40.14 4.02
63 64 5.447757 AGGTAGTAACATACTCCCTCTGTC 58.552 45.833 0.00 0.00 40.71 3.51
64 65 5.469210 AGGTAGTAACATACTCCCTCTGT 57.531 43.478 0.00 0.00 40.71 3.41
65 66 5.892119 TGAAGGTAGTAACATACTCCCTCTG 59.108 44.000 2.59 0.00 43.46 3.35
66 67 6.088541 TGAAGGTAGTAACATACTCCCTCT 57.911 41.667 2.59 0.00 43.46 3.69
67 68 6.980416 ATGAAGGTAGTAACATACTCCCTC 57.020 41.667 2.59 1.72 43.46 4.30
68 69 7.506261 CACTATGAAGGTAGTAACATACTCCCT 59.494 40.741 0.00 0.00 45.85 4.20
69 70 7.255871 CCACTATGAAGGTAGTAACATACTCCC 60.256 44.444 0.00 0.00 40.14 4.30
70 71 7.255871 CCCACTATGAAGGTAGTAACATACTCC 60.256 44.444 0.00 0.00 40.14 3.85
71 72 7.287235 ACCCACTATGAAGGTAGTAACATACTC 59.713 40.741 0.00 0.00 40.14 2.59
72 73 7.130775 ACCCACTATGAAGGTAGTAACATACT 58.869 38.462 0.00 0.00 42.68 2.12
73 74 7.357429 ACCCACTATGAAGGTAGTAACATAC 57.643 40.000 0.00 0.00 33.29 2.39
74 75 8.701908 CTACCCACTATGAAGGTAGTAACATA 57.298 38.462 7.19 0.00 45.39 2.29
75 76 7.598759 CTACCCACTATGAAGGTAGTAACAT 57.401 40.000 7.19 0.00 45.39 2.71
82 83 4.938028 TGACACTACCCACTATGAAGGTA 58.062 43.478 0.00 0.00 35.02 3.08
83 84 3.786553 TGACACTACCCACTATGAAGGT 58.213 45.455 0.00 0.00 37.69 3.50
84 85 5.011125 CCTATGACACTACCCACTATGAAGG 59.989 48.000 0.00 0.00 0.00 3.46
85 86 5.598830 ACCTATGACACTACCCACTATGAAG 59.401 44.000 0.00 0.00 0.00 3.02
86 87 5.362717 CACCTATGACACTACCCACTATGAA 59.637 44.000 0.00 0.00 0.00 2.57
87 88 4.893524 CACCTATGACACTACCCACTATGA 59.106 45.833 0.00 0.00 0.00 2.15
88 89 4.649674 ACACCTATGACACTACCCACTATG 59.350 45.833 0.00 0.00 0.00 2.23
89 90 4.649674 CACACCTATGACACTACCCACTAT 59.350 45.833 0.00 0.00 0.00 2.12
90 91 4.021229 CACACCTATGACACTACCCACTA 58.979 47.826 0.00 0.00 0.00 2.74
91 92 2.832129 CACACCTATGACACTACCCACT 59.168 50.000 0.00 0.00 0.00 4.00
92 93 2.093658 CCACACCTATGACACTACCCAC 60.094 54.545 0.00 0.00 0.00 4.61
93 94 2.184533 CCACACCTATGACACTACCCA 58.815 52.381 0.00 0.00 0.00 4.51
94 95 2.185387 ACCACACCTATGACACTACCC 58.815 52.381 0.00 0.00 0.00 3.69
95 96 4.221262 TGTTACCACACCTATGACACTACC 59.779 45.833 0.00 0.00 0.00 3.18
96 97 5.395682 TGTTACCACACCTATGACACTAC 57.604 43.478 0.00 0.00 0.00 2.73
97 98 7.120716 TCTATGTTACCACACCTATGACACTA 58.879 38.462 0.00 0.00 35.03 2.74
98 99 5.955959 TCTATGTTACCACACCTATGACACT 59.044 40.000 0.00 0.00 35.03 3.55
99 100 6.216801 TCTATGTTACCACACCTATGACAC 57.783 41.667 0.00 0.00 35.03 3.67
100 101 6.685368 GCATCTATGTTACCACACCTATGACA 60.685 42.308 0.00 0.00 35.03 3.58
101 102 5.696724 GCATCTATGTTACCACACCTATGAC 59.303 44.000 0.00 0.00 35.03 3.06
102 103 5.602561 AGCATCTATGTTACCACACCTATGA 59.397 40.000 0.00 0.00 35.03 2.15
103 104 5.858381 AGCATCTATGTTACCACACCTATG 58.142 41.667 0.00 0.00 35.03 2.23
104 105 6.500589 AAGCATCTATGTTACCACACCTAT 57.499 37.500 0.00 0.00 35.03 2.57
105 106 5.950544 AAGCATCTATGTTACCACACCTA 57.049 39.130 0.00 0.00 35.03 3.08
106 107 4.844349 AAGCATCTATGTTACCACACCT 57.156 40.909 0.00 0.00 35.03 4.00
107 108 4.941263 TGAAAGCATCTATGTTACCACACC 59.059 41.667 0.00 0.00 35.03 4.16
108 109 6.683974 ATGAAAGCATCTATGTTACCACAC 57.316 37.500 0.00 0.00 35.03 3.82
109 110 7.701539 AAATGAAAGCATCTATGTTACCACA 57.298 32.000 0.00 0.00 33.10 4.17
136 137 8.902806 CCCAATGCATAATGAGTCTAAAAAGTA 58.097 33.333 0.00 0.00 0.00 2.24
137 138 7.615365 TCCCAATGCATAATGAGTCTAAAAAGT 59.385 33.333 0.00 0.00 0.00 2.66
138 139 7.999679 TCCCAATGCATAATGAGTCTAAAAAG 58.000 34.615 0.00 0.00 0.00 2.27
139 140 7.953005 TCCCAATGCATAATGAGTCTAAAAA 57.047 32.000 0.00 0.00 0.00 1.94
140 141 7.416664 GCTTCCCAATGCATAATGAGTCTAAAA 60.417 37.037 0.00 0.00 0.00 1.52
141 142 6.039717 GCTTCCCAATGCATAATGAGTCTAAA 59.960 38.462 0.00 0.00 0.00 1.85
142 143 5.532406 GCTTCCCAATGCATAATGAGTCTAA 59.468 40.000 0.00 0.00 0.00 2.10
143 144 5.065914 GCTTCCCAATGCATAATGAGTCTA 58.934 41.667 0.00 0.00 0.00 2.59
144 145 3.887716 GCTTCCCAATGCATAATGAGTCT 59.112 43.478 0.00 0.00 0.00 3.24
145 146 3.304257 CGCTTCCCAATGCATAATGAGTC 60.304 47.826 0.00 0.00 0.00 3.36
146 147 2.620115 CGCTTCCCAATGCATAATGAGT 59.380 45.455 0.00 0.00 0.00 3.41
147 148 2.606308 GCGCTTCCCAATGCATAATGAG 60.606 50.000 0.00 0.00 0.00 2.90
148 149 1.337703 GCGCTTCCCAATGCATAATGA 59.662 47.619 0.00 0.00 0.00 2.57
149 150 1.338973 AGCGCTTCCCAATGCATAATG 59.661 47.619 2.64 0.00 0.00 1.90
150 151 1.696063 AGCGCTTCCCAATGCATAAT 58.304 45.000 2.64 0.00 0.00 1.28
151 152 2.340210 TAGCGCTTCCCAATGCATAA 57.660 45.000 18.68 0.00 0.00 1.90
152 153 2.153645 CATAGCGCTTCCCAATGCATA 58.846 47.619 18.68 0.00 0.00 3.14
153 154 0.956633 CATAGCGCTTCCCAATGCAT 59.043 50.000 18.68 0.00 0.00 3.96
154 155 0.394216 ACATAGCGCTTCCCAATGCA 60.394 50.000 18.68 0.00 0.00 3.96
155 156 0.029834 CACATAGCGCTTCCCAATGC 59.970 55.000 18.68 0.00 0.00 3.56
156 157 1.667236 TCACATAGCGCTTCCCAATG 58.333 50.000 18.68 15.83 0.00 2.82
157 158 2.224606 CATCACATAGCGCTTCCCAAT 58.775 47.619 18.68 0.00 0.00 3.16
158 159 1.667236 CATCACATAGCGCTTCCCAA 58.333 50.000 18.68 0.00 0.00 4.12
159 160 0.179048 CCATCACATAGCGCTTCCCA 60.179 55.000 18.68 0.00 0.00 4.37
160 161 0.179045 ACCATCACATAGCGCTTCCC 60.179 55.000 18.68 0.00 0.00 3.97
161 162 2.526304 TACCATCACATAGCGCTTCC 57.474 50.000 18.68 0.00 0.00 3.46
162 163 3.194861 TGTTACCATCACATAGCGCTTC 58.805 45.455 18.68 0.00 0.00 3.86
163 164 3.260475 TGTTACCATCACATAGCGCTT 57.740 42.857 18.68 0.00 0.00 4.68
164 165 2.979814 TGTTACCATCACATAGCGCT 57.020 45.000 17.26 17.26 0.00 5.92
165 166 5.862924 AATATGTTACCATCACATAGCGC 57.137 39.130 0.00 0.00 39.83 5.92
166 167 8.479313 ACATAATATGTTACCATCACATAGCG 57.521 34.615 0.00 0.00 41.63 4.26
185 186 9.771534 GAAGAGAGGCAAATAGAGTAACATAAT 57.228 33.333 0.00 0.00 0.00 1.28
186 187 8.982723 AGAAGAGAGGCAAATAGAGTAACATAA 58.017 33.333 0.00 0.00 0.00 1.90
187 188 8.540507 AGAAGAGAGGCAAATAGAGTAACATA 57.459 34.615 0.00 0.00 0.00 2.29
188 189 7.430760 AGAAGAGAGGCAAATAGAGTAACAT 57.569 36.000 0.00 0.00 0.00 2.71
189 190 6.859112 AGAAGAGAGGCAAATAGAGTAACA 57.141 37.500 0.00 0.00 0.00 2.41
190 191 9.825109 AATAAGAAGAGAGGCAAATAGAGTAAC 57.175 33.333 0.00 0.00 0.00 2.50
193 194 9.825109 GTTAATAAGAAGAGAGGCAAATAGAGT 57.175 33.333 0.00 0.00 0.00 3.24
199 200 9.436957 CAAGTAGTTAATAAGAAGAGAGGCAAA 57.563 33.333 0.00 0.00 0.00 3.68
200 201 7.549488 GCAAGTAGTTAATAAGAAGAGAGGCAA 59.451 37.037 0.00 0.00 0.00 4.52
201 202 7.042335 GCAAGTAGTTAATAAGAAGAGAGGCA 58.958 38.462 0.00 0.00 0.00 4.75
202 203 6.480651 GGCAAGTAGTTAATAAGAAGAGAGGC 59.519 42.308 0.00 0.00 0.00 4.70
203 204 7.492994 GTGGCAAGTAGTTAATAAGAAGAGAGG 59.507 40.741 0.00 0.00 0.00 3.69
204 205 8.035394 TGTGGCAAGTAGTTAATAAGAAGAGAG 58.965 37.037 0.00 0.00 0.00 3.20
205 206 7.903145 TGTGGCAAGTAGTTAATAAGAAGAGA 58.097 34.615 0.00 0.00 0.00 3.10
206 207 8.723942 ATGTGGCAAGTAGTTAATAAGAAGAG 57.276 34.615 0.00 0.00 0.00 2.85
207 208 8.318412 TGATGTGGCAAGTAGTTAATAAGAAGA 58.682 33.333 0.00 0.00 0.00 2.87
208 209 8.391106 GTGATGTGGCAAGTAGTTAATAAGAAG 58.609 37.037 0.00 0.00 0.00 2.85
209 210 7.335924 GGTGATGTGGCAAGTAGTTAATAAGAA 59.664 37.037 0.00 0.00 0.00 2.52
210 211 6.821665 GGTGATGTGGCAAGTAGTTAATAAGA 59.178 38.462 0.00 0.00 0.00 2.10
211 212 6.597672 TGGTGATGTGGCAAGTAGTTAATAAG 59.402 38.462 0.00 0.00 0.00 1.73
212 213 6.477253 TGGTGATGTGGCAAGTAGTTAATAA 58.523 36.000 0.00 0.00 0.00 1.40
213 214 6.056090 TGGTGATGTGGCAAGTAGTTAATA 57.944 37.500 0.00 0.00 0.00 0.98
214 215 4.917385 TGGTGATGTGGCAAGTAGTTAAT 58.083 39.130 0.00 0.00 0.00 1.40
215 216 4.359434 TGGTGATGTGGCAAGTAGTTAA 57.641 40.909 0.00 0.00 0.00 2.01
216 217 4.568072 ATGGTGATGTGGCAAGTAGTTA 57.432 40.909 0.00 0.00 0.00 2.24
217 218 2.949177 TGGTGATGTGGCAAGTAGTT 57.051 45.000 0.00 0.00 0.00 2.24
218 219 3.439857 AATGGTGATGTGGCAAGTAGT 57.560 42.857 0.00 0.00 0.00 2.73
219 220 4.789012 AAAATGGTGATGTGGCAAGTAG 57.211 40.909 0.00 0.00 0.00 2.57
220 221 5.772672 AGTAAAAATGGTGATGTGGCAAGTA 59.227 36.000 0.00 0.00 0.00 2.24
221 222 4.588528 AGTAAAAATGGTGATGTGGCAAGT 59.411 37.500 0.00 0.00 0.00 3.16
222 223 5.138125 AGTAAAAATGGTGATGTGGCAAG 57.862 39.130 0.00 0.00 0.00 4.01
223 224 5.543507 AAGTAAAAATGGTGATGTGGCAA 57.456 34.783 0.00 0.00 0.00 4.52
224 225 5.335269 CGTAAGTAAAAATGGTGATGTGGCA 60.335 40.000 0.00 0.00 0.00 4.92
225 226 5.092781 CGTAAGTAAAAATGGTGATGTGGC 58.907 41.667 0.00 0.00 0.00 5.01
244 245 5.595542 AGGTAGTAACATAGATGCCACGTAA 59.404 40.000 0.00 0.00 0.00 3.18
245 246 5.135383 AGGTAGTAACATAGATGCCACGTA 58.865 41.667 0.00 0.00 0.00 3.57
246 247 3.958798 AGGTAGTAACATAGATGCCACGT 59.041 43.478 0.00 0.00 0.00 4.49
247 248 4.585955 AGGTAGTAACATAGATGCCACG 57.414 45.455 0.00 0.00 0.00 4.94
262 263 8.114743 GGTCATAGTGGGAGTAATATAGGTAGT 58.885 40.741 0.00 0.00 0.00 2.73
263 264 8.114102 TGGTCATAGTGGGAGTAATATAGGTAG 58.886 40.741 0.00 0.00 0.00 3.18
264 265 8.003564 TGGTCATAGTGGGAGTAATATAGGTA 57.996 38.462 0.00 0.00 0.00 3.08
265 266 6.871035 TGGTCATAGTGGGAGTAATATAGGT 58.129 40.000 0.00 0.00 0.00 3.08
266 267 6.127310 GCTGGTCATAGTGGGAGTAATATAGG 60.127 46.154 0.00 0.00 0.00 2.57
267 268 6.127310 GGCTGGTCATAGTGGGAGTAATATAG 60.127 46.154 0.00 0.00 0.00 1.31
268 269 5.720041 GGCTGGTCATAGTGGGAGTAATATA 59.280 44.000 0.00 0.00 0.00 0.86
269 270 4.532521 GGCTGGTCATAGTGGGAGTAATAT 59.467 45.833 0.00 0.00 0.00 1.28
270 271 3.901844 GGCTGGTCATAGTGGGAGTAATA 59.098 47.826 0.00 0.00 0.00 0.98
271 272 2.706190 GGCTGGTCATAGTGGGAGTAAT 59.294 50.000 0.00 0.00 0.00 1.89
272 273 2.116238 GGCTGGTCATAGTGGGAGTAA 58.884 52.381 0.00 0.00 0.00 2.24
273 274 1.291033 AGGCTGGTCATAGTGGGAGTA 59.709 52.381 0.00 0.00 0.00 2.59
274 275 0.043334 AGGCTGGTCATAGTGGGAGT 59.957 55.000 0.00 0.00 0.00 3.85
275 276 1.207791 AAGGCTGGTCATAGTGGGAG 58.792 55.000 0.00 0.00 0.00 4.30
276 277 2.561209 TAAGGCTGGTCATAGTGGGA 57.439 50.000 0.00 0.00 0.00 4.37
277 278 3.199946 TCTTTAAGGCTGGTCATAGTGGG 59.800 47.826 0.00 0.00 0.00 4.61
278 279 4.487714 TCTTTAAGGCTGGTCATAGTGG 57.512 45.455 0.00 0.00 0.00 4.00
279 280 5.525378 GTCATCTTTAAGGCTGGTCATAGTG 59.475 44.000 0.00 0.00 0.00 2.74
280 281 5.189736 TGTCATCTTTAAGGCTGGTCATAGT 59.810 40.000 0.00 0.00 0.00 2.12
281 282 5.674525 TGTCATCTTTAAGGCTGGTCATAG 58.325 41.667 0.00 0.00 0.00 2.23
282 283 5.692115 TGTCATCTTTAAGGCTGGTCATA 57.308 39.130 0.00 0.00 0.00 2.15
283 284 4.574674 TGTCATCTTTAAGGCTGGTCAT 57.425 40.909 0.00 0.00 0.00 3.06
284 285 4.574674 ATGTCATCTTTAAGGCTGGTCA 57.425 40.909 0.00 0.00 0.00 4.02
285 286 6.116126 AGTTATGTCATCTTTAAGGCTGGTC 58.884 40.000 0.00 0.00 0.00 4.02
286 287 6.067217 AGTTATGTCATCTTTAAGGCTGGT 57.933 37.500 0.00 0.00 0.00 4.00
287 288 7.396540 AAAGTTATGTCATCTTTAAGGCTGG 57.603 36.000 0.00 0.00 30.98 4.85
288 289 8.299570 ACAAAAGTTATGTCATCTTTAAGGCTG 58.700 33.333 0.00 0.00 32.22 4.85
289 290 8.299570 CACAAAAGTTATGTCATCTTTAAGGCT 58.700 33.333 0.00 0.00 32.22 4.58
290 291 8.296713 TCACAAAAGTTATGTCATCTTTAAGGC 58.703 33.333 0.00 0.00 32.22 4.35
293 294 9.677567 GCTTCACAAAAGTTATGTCATCTTTAA 57.322 29.630 0.00 0.00 32.22 1.52
294 295 8.296713 GGCTTCACAAAAGTTATGTCATCTTTA 58.703 33.333 0.00 0.00 32.22 1.85
295 296 7.147976 GGCTTCACAAAAGTTATGTCATCTTT 58.852 34.615 0.00 0.00 33.61 2.52
296 297 6.265196 TGGCTTCACAAAAGTTATGTCATCTT 59.735 34.615 0.00 0.00 0.00 2.40
297 298 5.769662 TGGCTTCACAAAAGTTATGTCATCT 59.230 36.000 0.00 0.00 0.00 2.90
298 299 6.012658 TGGCTTCACAAAAGTTATGTCATC 57.987 37.500 0.00 0.00 0.00 2.92
299 300 5.536161 ACTGGCTTCACAAAAGTTATGTCAT 59.464 36.000 0.00 0.00 0.00 3.06
300 301 4.887071 ACTGGCTTCACAAAAGTTATGTCA 59.113 37.500 0.00 0.00 0.00 3.58
301 302 5.438761 ACTGGCTTCACAAAAGTTATGTC 57.561 39.130 0.00 0.00 0.00 3.06
302 303 5.852282 AACTGGCTTCACAAAAGTTATGT 57.148 34.783 0.00 0.00 29.56 2.29
303 304 6.272318 TGAAACTGGCTTCACAAAAGTTATG 58.728 36.000 0.00 0.00 30.31 1.90
304 305 6.463995 TGAAACTGGCTTCACAAAAGTTAT 57.536 33.333 0.00 0.00 30.31 1.89
305 306 5.906113 TGAAACTGGCTTCACAAAAGTTA 57.094 34.783 0.00 0.00 30.31 2.24
306 307 4.799564 TGAAACTGGCTTCACAAAAGTT 57.200 36.364 0.00 0.00 30.31 2.66
312 313 6.489700 TGAGATATTTTGAAACTGGCTTCACA 59.510 34.615 0.00 0.00 35.07 3.58
322 323 4.732784 TGCGCCTTGAGATATTTTGAAAC 58.267 39.130 4.18 0.00 0.00 2.78
395 402 2.349817 CGATTCCATTTCTATGCACGGC 60.350 50.000 0.00 0.00 0.00 5.68
398 405 3.555956 ACGACGATTCCATTTCTATGCAC 59.444 43.478 0.00 0.00 0.00 4.57
409 416 1.887854 TGGACTGTAACGACGATTCCA 59.112 47.619 0.00 0.00 0.00 3.53
484 498 7.886629 TTTTTAGAGGATAGTAGAAGGCGTA 57.113 36.000 0.00 0.00 0.00 4.42
798 859 1.006220 CCCCAAAACTTTCCGCTGC 60.006 57.895 0.00 0.00 0.00 5.25
809 870 3.302344 GAGCAAGCGGCCCCAAAA 61.302 61.111 0.00 0.00 46.50 2.44
832 893 3.687102 TGGTGTGGTCGGGTAGCG 61.687 66.667 0.00 0.00 0.00 4.26
1256 1337 0.172578 CGGGCGAGATGAAGTGTGTA 59.827 55.000 0.00 0.00 0.00 2.90
1259 1340 2.579201 CCGGGCGAGATGAAGTGT 59.421 61.111 0.00 0.00 0.00 3.55
1260 1341 2.892425 GCCGGGCGAGATGAAGTG 60.892 66.667 1.81 0.00 0.00 3.16
1286 1367 2.227865 GACAGACACCTCTCAGAGTCAC 59.772 54.545 0.00 0.00 33.56 3.67
1291 1372 1.916506 CCAGACAGACACCTCTCAGA 58.083 55.000 0.00 0.00 0.00 3.27
1292 1373 0.246086 GCCAGACAGACACCTCTCAG 59.754 60.000 0.00 0.00 0.00 3.35
1293 1374 0.178950 AGCCAGACAGACACCTCTCA 60.179 55.000 0.00 0.00 0.00 3.27
1294 1375 0.530288 GAGCCAGACAGACACCTCTC 59.470 60.000 0.00 0.00 0.00 3.20
1295 1376 0.902516 GGAGCCAGACAGACACCTCT 60.903 60.000 0.00 0.00 0.00 3.69
1296 1377 1.594310 GGAGCCAGACAGACACCTC 59.406 63.158 0.00 0.00 0.00 3.85
1297 1378 1.915769 GGGAGCCAGACAGACACCT 60.916 63.158 0.00 0.00 0.00 4.00
1298 1379 2.665603 GGGAGCCAGACAGACACC 59.334 66.667 0.00 0.00 0.00 4.16
1316 1397 0.166814 GTCGAACATCTGCAACCAGC 59.833 55.000 0.00 0.00 45.96 4.85
1510 1591 4.105377 AGCTCCATGTATAAAATGGGAGCT 59.895 41.667 23.26 23.26 44.66 4.09
1518 1599 9.569122 GGGTCTTAATTAGCTCCATGTATAAAA 57.431 33.333 0.00 0.00 0.00 1.52
1559 1654 7.562454 ACATGGCAGTAATTGGTACTAGTAGTA 59.438 37.037 5.90 5.90 41.37 1.82
1560 1655 6.383147 ACATGGCAGTAATTGGTACTAGTAGT 59.617 38.462 8.14 8.14 41.37 2.73
1561 1656 6.817184 ACATGGCAGTAATTGGTACTAGTAG 58.183 40.000 1.87 0.00 41.37 2.57
1562 1657 6.610020 AGACATGGCAGTAATTGGTACTAGTA 59.390 38.462 0.00 0.00 41.37 1.82
1563 1658 5.425539 AGACATGGCAGTAATTGGTACTAGT 59.574 40.000 0.00 0.00 41.37 2.57
1564 1659 5.918608 AGACATGGCAGTAATTGGTACTAG 58.081 41.667 0.00 0.00 41.37 2.57
1565 1660 5.950544 AGACATGGCAGTAATTGGTACTA 57.049 39.130 0.00 0.00 41.37 1.82
1566 1661 4.844349 AGACATGGCAGTAATTGGTACT 57.156 40.909 0.00 0.00 44.33 2.73
1567 1662 5.914033 TCTAGACATGGCAGTAATTGGTAC 58.086 41.667 0.00 0.00 0.00 3.34
1649 1762 2.547634 GGTACTGTAGGAGCGTACTAGC 59.452 54.545 0.00 0.00 35.17 3.42
1809 1922 5.361571 TGATCAGCCGACAGGTAGTAAATTA 59.638 40.000 0.00 0.00 40.50 1.40
1820 1933 1.645034 AAACGATGATCAGCCGACAG 58.355 50.000 22.04 4.55 0.00 3.51
1903 2019 4.554292 AGCAGCGACATATACTCATGAAG 58.446 43.478 0.00 0.00 0.00 3.02
1911 2027 6.153067 AGTGATAAGAAGCAGCGACATATAC 58.847 40.000 0.00 0.00 0.00 1.47
1938 2054 4.020218 TCCAACTCTACAAATGGAGACCAG 60.020 45.833 0.00 0.00 37.05 4.00
1943 2059 3.679980 CACGTCCAACTCTACAAATGGAG 59.320 47.826 0.00 0.00 42.35 3.86
2044 2160 5.619981 CGCAAAATAGAGGGAAAACTTGAGG 60.620 44.000 0.00 0.00 0.00 3.86
2113 2230 8.886719 TCATAGCTACATCTTTTCAAAGTCATG 58.113 33.333 0.00 0.00 37.31 3.07
2123 2240 7.175641 AGCAACACTTTCATAGCTACATCTTTT 59.824 33.333 0.00 0.00 0.00 2.27
2185 2302 5.732647 CACCAAATGAAAATTCTACGCGTAG 59.267 40.000 34.93 34.93 34.56 3.51
2188 2305 4.553429 GTCACCAAATGAAAATTCTACGCG 59.447 41.667 3.53 3.53 39.72 6.01
2212 2329 3.780804 TGAAGTAAACAGCAAGCCCTA 57.219 42.857 0.00 0.00 0.00 3.53
2323 2444 7.614124 AAAAAGGTAAGTGTCGTTCTAAACA 57.386 32.000 0.00 0.00 0.00 2.83
2371 2493 3.533606 CAGCATGTAGAGTAGGCACTT 57.466 47.619 0.00 0.00 41.75 3.16
2393 2516 3.534160 CCGAACGGTGAACACTCG 58.466 61.111 4.99 8.99 0.00 4.18
2412 2535 3.242712 CGCGCAAAGTTTTGAAATGAACT 59.757 39.130 8.75 0.00 40.55 3.01
2545 2669 1.963464 GCCAATCTGGGTGGGCAATG 61.963 60.000 0.00 0.00 45.70 2.82
2554 2678 0.993509 TCTAAGGGGGCCAATCTGGG 60.994 60.000 4.39 0.00 38.19 4.45
2682 2806 4.859629 ACAGAACAGACGTGAAGAAAAC 57.140 40.909 0.00 0.00 0.00 2.43
2683 2807 5.412640 TGTACAGAACAGACGTGAAGAAAA 58.587 37.500 0.00 0.00 33.01 2.29
2684 2808 5.001237 TGTACAGAACAGACGTGAAGAAA 57.999 39.130 0.00 0.00 33.01 2.52
2743 2867 9.702253 AATATTCAGAGAGTAGAACTTCTGGTA 57.298 33.333 1.17 10.28 35.75 3.25
2759 2883 6.030849 ACGAAGACAACGAGAATATTCAGAG 58.969 40.000 17.56 10.09 34.70 3.35
2781 2905 8.895845 CAAAGTGACAAGAAAATAAAGATGACG 58.104 33.333 0.00 0.00 0.00 4.35
2928 3058 9.944663 TGTTTGCAAATATATCGTATCTTTTCC 57.055 29.630 16.21 0.00 0.00 3.13
2962 3092 6.992715 ACAAAAATCTGTACTGCTACAAGACT 59.007 34.615 0.00 0.00 32.24 3.24
3014 3144 4.521639 ACATGTGCACTTGAGAAACATCAT 59.478 37.500 32.41 9.05 29.20 2.45
3050 3188 5.587388 AGAGGCAATATGGATTTTGTGTG 57.413 39.130 0.00 0.00 0.00 3.82
3062 3200 9.071276 CACCTTGTATATTTCAAGAGGCAATAT 57.929 33.333 16.67 0.00 43.17 1.28
3071 3209 7.678226 GCAAAATGCACCTTGTATATTTCAAG 58.322 34.615 10.42 11.15 44.26 3.02
3108 3246 4.082245 GGATTTTTCACACATGGGTACAGG 60.082 45.833 0.00 0.00 0.00 4.00
3112 3250 2.490115 GCGGATTTTTCACACATGGGTA 59.510 45.455 0.00 0.00 0.00 3.69
3128 3266 7.391148 AACACTTTATTACAAGAATGCGGAT 57.609 32.000 0.00 0.00 0.00 4.18
3185 3325 7.201644 GCTGTAGCAAGCATTAGAAGACATTAA 60.202 37.037 0.00 0.00 43.01 1.40
3207 3347 4.721132 GACCTCCAGTACTAGATAGCTGT 58.279 47.826 0.00 0.00 0.00 4.40
3220 3360 6.540438 TGAAATAATAAGACGACCTCCAGT 57.460 37.500 0.00 0.00 0.00 4.00
3234 3374 6.072397 CCCAAACACCGTCACTTGAAATAATA 60.072 38.462 0.00 0.00 0.00 0.98
3273 3413 1.648681 GCGCAACTAAAAGCCATTTCG 59.351 47.619 0.30 0.00 32.27 3.46
3312 3452 0.171679 CAATTTGATCCGCTGCAGCA 59.828 50.000 36.03 20.16 42.21 4.41
3353 3493 6.711277 TCAGGTTGTATGCTAAGAAATGAGT 58.289 36.000 0.00 0.00 0.00 3.41
3363 3503 5.692115 TGAGGATTTCAGGTTGTATGCTA 57.308 39.130 0.00 0.00 0.00 3.49
3364 3504 4.574674 TGAGGATTTCAGGTTGTATGCT 57.425 40.909 0.00 0.00 0.00 3.79
3424 3566 6.317789 TCCTGCAAAAGATCAACAGTAAAG 57.682 37.500 0.00 0.00 0.00 1.85
3458 3600 8.336235 AGTTGTATCATCCCTTAATCCTTTTGA 58.664 33.333 0.00 0.00 0.00 2.69
3508 3650 3.562182 AGTGGATTTCGGTTTTTCTGGT 58.438 40.909 0.00 0.00 0.00 4.00
3615 3757 3.380637 AGAAGTACGTTCCGTATCAGCAT 59.619 43.478 0.00 0.00 44.12 3.79
3628 3770 0.608582 AGTCGGGCTCAGAAGTACGT 60.609 55.000 0.00 0.00 0.00 3.57
3685 3827 6.126739 GGAGAAAGGGAACATACCATCTTAGT 60.127 42.308 0.00 0.00 29.85 2.24
3713 3855 0.241213 AGTATGGATCCATCGACGCG 59.759 55.000 30.61 3.53 37.82 6.01
3715 3857 4.215613 TGAACTAGTATGGATCCATCGACG 59.784 45.833 30.61 18.85 37.82 5.12
3800 3942 0.961358 AGCACGAGTAGCGAGGAAGT 60.961 55.000 0.00 0.00 44.57 3.01
3801 3943 1.015109 TAGCACGAGTAGCGAGGAAG 58.985 55.000 0.00 0.00 44.57 3.46
3802 3944 1.456296 TTAGCACGAGTAGCGAGGAA 58.544 50.000 0.00 0.00 44.57 3.36
3803 3945 1.131883 GTTTAGCACGAGTAGCGAGGA 59.868 52.381 0.00 0.00 44.57 3.71
3804 3946 1.132643 AGTTTAGCACGAGTAGCGAGG 59.867 52.381 0.00 0.00 44.57 4.63
3805 3947 2.546195 AGTTTAGCACGAGTAGCGAG 57.454 50.000 0.00 0.00 44.57 5.03
3807 3949 7.518052 ACTACTATTAGTTTAGCACGAGTAGCG 60.518 40.741 0.85 0.00 39.83 4.26
3808 3950 7.587028 CACTACTATTAGTTTAGCACGAGTAGC 59.413 40.741 0.85 0.00 39.02 3.58
3809 3951 8.068977 CCACTACTATTAGTTTAGCACGAGTAG 58.931 40.741 0.85 0.00 40.50 2.57
3810 3952 7.554118 ACCACTACTATTAGTTTAGCACGAGTA 59.446 37.037 0.85 0.00 36.31 2.59
3812 3954 6.793349 ACCACTACTATTAGTTTAGCACGAG 58.207 40.000 0.85 0.00 36.31 4.18
3814 3956 7.823149 AAACCACTACTATTAGTTTAGCACG 57.177 36.000 0.85 0.00 36.31 5.34
3821 3963 9.654663 CAGAAAGCTAAACCACTACTATTAGTT 57.345 33.333 0.85 0.00 36.31 2.24
3822 3964 9.032624 TCAGAAAGCTAAACCACTACTATTAGT 57.967 33.333 1.30 1.30 39.30 2.24
3830 4017 9.515226 ACAAATTATCAGAAAGCTAAACCACTA 57.485 29.630 0.00 0.00 0.00 2.74
3845 4032 7.392673 AGGCTTCCAGCATATACAAATTATCAG 59.607 37.037 0.00 0.00 44.75 2.90
3848 4035 6.435277 CCAGGCTTCCAGCATATACAAATTAT 59.565 38.462 0.00 0.00 44.75 1.28
3852 4039 3.201930 TCCAGGCTTCCAGCATATACAAA 59.798 43.478 0.00 0.00 44.75 2.83
3857 4044 1.565759 TGTTCCAGGCTTCCAGCATAT 59.434 47.619 0.00 0.00 44.75 1.78
3858 4045 0.991146 TGTTCCAGGCTTCCAGCATA 59.009 50.000 0.00 0.00 44.75 3.14
3859 4046 0.610232 GTGTTCCAGGCTTCCAGCAT 60.610 55.000 0.00 0.00 44.75 3.79
3860 4047 1.228245 GTGTTCCAGGCTTCCAGCA 60.228 57.895 0.00 0.00 44.75 4.41
3861 4048 1.228245 TGTGTTCCAGGCTTCCAGC 60.228 57.895 0.00 0.00 41.46 4.85
3862 4049 2.938354 CTGTGTTCCAGGCTTCCAG 58.062 57.895 0.00 0.00 37.54 3.86
3982 4247 0.179004 TGCCCAGTTTCGTTGGATGT 60.179 50.000 0.00 0.00 37.96 3.06
3986 4251 0.451783 GCTATGCCCAGTTTCGTTGG 59.548 55.000 0.00 0.00 35.41 3.77
4039 4304 5.420725 ACATGTGATAGCCTAAACACAGA 57.579 39.130 16.12 0.52 44.39 3.41
4045 4310 8.892723 CACAAATCTAACATGTGATAGCCTAAA 58.107 33.333 0.00 0.00 45.61 1.85
4048 4313 6.418101 ACACAAATCTAACATGTGATAGCCT 58.582 36.000 11.66 0.00 45.61 4.58
4075 4340 9.839817 TGTAATGCTAGCCAAATGTACTAAATA 57.160 29.630 13.29 0.00 0.00 1.40
4107 4372 3.690460 AGAAGACTTATTGCCTGGTTGG 58.310 45.455 0.00 0.00 39.35 3.77
4145 4410 3.453353 ACAAAGGAAGTATAGCGCCCTAA 59.547 43.478 2.29 0.00 0.00 2.69
4150 4415 3.454375 TGCTACAAAGGAAGTATAGCGC 58.546 45.455 0.00 0.00 40.94 5.92
4162 4427 9.754382 ATCCAAATATTTAGCAATGCTACAAAG 57.246 29.630 15.31 1.88 41.12 2.77
4316 4581 1.982958 GGGGGAGTTTGAGTTGTCCTA 59.017 52.381 0.00 0.00 0.00 2.94
4317 4582 0.771755 GGGGGAGTTTGAGTTGTCCT 59.228 55.000 0.00 0.00 0.00 3.85
4391 4656 5.712152 CCATAAGTTTAGGATTGGATGGC 57.288 43.478 0.00 0.00 0.00 4.40
4424 4689 7.540299 TGGTTTTAAAGTTCAGTGTCGAAAAT 58.460 30.769 0.00 0.00 0.00 1.82
4684 5546 2.452600 TTCCTGGCTTTGACAAACCT 57.547 45.000 15.83 0.00 0.00 3.50
4735 5597 0.397941 TCTTCTCCTGGCAACTGTGG 59.602 55.000 0.00 0.00 37.61 4.17
4750 5612 3.690460 TCCCTCCATTGCTTCTTTCTTC 58.310 45.455 0.00 0.00 0.00 2.87
4808 5672 5.620879 GCTTTCAGGCTGAAAAATAGGTCAG 60.621 44.000 34.65 23.62 44.69 3.51
4812 5676 3.511146 TGGCTTTCAGGCTGAAAAATAGG 59.489 43.478 34.65 25.64 44.69 2.57
4819 5683 1.999648 AATGTGGCTTTCAGGCTGAA 58.000 45.000 25.38 25.38 41.96 3.02
4824 5688 3.967332 ATTCCAAATGTGGCTTTCAGG 57.033 42.857 0.00 0.00 45.54 3.86
4825 5689 7.325694 AGATTTATTCCAAATGTGGCTTTCAG 58.674 34.615 0.00 0.00 45.54 3.02
4859 5723 4.074970 GTTTCTTGAGGAGGAATCTGCAA 58.925 43.478 0.00 0.00 33.43 4.08
4922 5786 0.174845 TCGTTAGATGGTTGCTCCGG 59.825 55.000 0.00 0.00 39.52 5.14
4923 5787 2.225068 ATCGTTAGATGGTTGCTCCG 57.775 50.000 0.00 0.00 39.52 4.63
4924 5788 4.691216 GGAATATCGTTAGATGGTTGCTCC 59.309 45.833 0.00 0.00 37.70 4.70
4925 5789 4.386049 CGGAATATCGTTAGATGGTTGCTC 59.614 45.833 0.00 0.00 37.70 4.26
4958 5822 1.020861 TGCCAAGTGTCAGCTATGCG 61.021 55.000 0.00 0.00 0.00 4.73
4978 5842 4.778534 AACAGATCAACCATTGCAAGAG 57.221 40.909 4.94 0.57 0.00 2.85
5037 5901 1.696884 CTCCCTCCCTCTTAATCCAGC 59.303 57.143 0.00 0.00 0.00 4.85
5045 5909 0.252927 CAAGTCCCTCCCTCCCTCTT 60.253 60.000 0.00 0.00 0.00 2.85
5047 5911 1.081277 ACAAGTCCCTCCCTCCCTC 59.919 63.158 0.00 0.00 0.00 4.30
5062 5942 0.527385 GCTTTGGCGCTTCAACACAA 60.527 50.000 7.64 0.00 0.00 3.33
5073 5953 2.749621 AGGAGTATCTTTTGCTTTGGCG 59.250 45.455 0.00 0.00 36.82 5.69
5083 5963 5.655488 CATCACAAGACGAGGAGTATCTTT 58.345 41.667 0.00 0.00 30.17 2.52
5133 6014 2.041620 AGCCCACTGAACATGTTGGTAT 59.958 45.455 17.58 0.00 0.00 2.73
5164 6045 3.130819 CCTGTTTATGCGCCGCCA 61.131 61.111 6.63 0.00 0.00 5.69
5165 6046 2.822255 TCCTGTTTATGCGCCGCC 60.822 61.111 6.63 0.00 0.00 6.13
5166 6047 2.403586 GTCCTGTTTATGCGCCGC 59.596 61.111 4.18 0.00 0.00 6.53
5167 6048 1.355796 TTCGTCCTGTTTATGCGCCG 61.356 55.000 4.18 0.00 0.00 6.46
5168 6049 0.373716 CTTCGTCCTGTTTATGCGCC 59.626 55.000 4.18 0.00 0.00 6.53
5169 6050 0.373716 CCTTCGTCCTGTTTATGCGC 59.626 55.000 0.00 0.00 0.00 6.09
5170 6051 0.373716 GCCTTCGTCCTGTTTATGCG 59.626 55.000 0.00 0.00 0.00 4.73
5183 6064 0.733566 TAGCCGTTAACACGCCTTCG 60.734 55.000 6.39 0.00 45.72 3.79
5184 6065 0.717784 GTAGCCGTTAACACGCCTTC 59.282 55.000 6.39 0.00 45.72 3.46
5185 6066 0.671472 GGTAGCCGTTAACACGCCTT 60.671 55.000 6.39 0.00 45.72 4.35
5187 6068 1.079612 AGGTAGCCGTTAACACGCC 60.080 57.895 6.39 5.51 45.72 5.68
5188 6069 0.108945 AGAGGTAGCCGTTAACACGC 60.109 55.000 6.39 6.49 45.72 5.34
5189 6070 1.468736 GGAGAGGTAGCCGTTAACACG 60.469 57.143 6.39 0.00 46.71 4.49
5191 6072 2.226962 AGGAGAGGTAGCCGTTAACA 57.773 50.000 6.39 0.00 0.00 2.41
5192 6073 3.067883 CCTTAGGAGAGGTAGCCGTTAAC 59.932 52.174 0.00 0.00 31.89 2.01
5193 6074 3.294214 CCTTAGGAGAGGTAGCCGTTAA 58.706 50.000 0.00 0.00 31.89 2.01
5195 6076 1.777941 CCTTAGGAGAGGTAGCCGTT 58.222 55.000 0.00 0.00 31.89 4.44
5196 6077 3.516911 CCTTAGGAGAGGTAGCCGT 57.483 57.895 0.00 0.00 31.89 5.68
5203 6084 0.827368 GTGGCTGACCTTAGGAGAGG 59.173 60.000 4.77 0.00 42.75 3.69
5204 6085 0.827368 GGTGGCTGACCTTAGGAGAG 59.173 60.000 4.77 0.81 42.25 3.20
5205 6086 0.116342 TGGTGGCTGACCTTAGGAGA 59.884 55.000 4.77 0.00 46.32 3.71
5206 6087 1.134280 CATGGTGGCTGACCTTAGGAG 60.134 57.143 4.77 0.00 46.32 3.69
5209 6090 3.627395 TTACATGGTGGCTGACCTTAG 57.373 47.619 0.00 0.73 46.32 2.18
5210 6091 4.584638 ATTTACATGGTGGCTGACCTTA 57.415 40.909 0.00 0.00 46.32 2.69
5211 6092 2.969821 TTTACATGGTGGCTGACCTT 57.030 45.000 0.00 0.00 46.32 3.50
5212 6093 3.456380 AATTTACATGGTGGCTGACCT 57.544 42.857 0.00 0.00 46.32 3.85
5213 6094 4.278419 GGATAATTTACATGGTGGCTGACC 59.722 45.833 0.00 0.00 46.37 4.02
5214 6095 4.887071 TGGATAATTTACATGGTGGCTGAC 59.113 41.667 0.00 0.00 0.00 3.51
5215 6096 5.122707 TGGATAATTTACATGGTGGCTGA 57.877 39.130 0.00 0.00 0.00 4.26
5249 6130 3.254654 CGGCGGCTATGTGTCACG 61.255 66.667 7.61 0.00 0.00 4.35
5265 6146 3.676172 TCCTACTTGACAAATACAACGCG 59.324 43.478 3.53 3.53 0.00 6.01
5268 6149 8.391106 CAGCTAATCCTACTTGACAAATACAAC 58.609 37.037 0.00 0.00 0.00 3.32
5367 6248 4.093408 CAGTATTGAACCATGGAAGACACG 59.907 45.833 21.47 1.93 0.00 4.49
5370 6251 7.865706 ATTACAGTATTGAACCATGGAAGAC 57.134 36.000 21.47 10.07 0.00 3.01
5438 6319 6.208840 AGGAATACAGGGGTACAAAGAAAA 57.791 37.500 0.00 0.00 30.94 2.29
5465 6346 3.411808 GTGAGCCGTCACGTCATTA 57.588 52.632 0.00 0.00 43.75 1.90
5512 6393 9.429359 CCCATATTGTCAAATCTAGATACAGTC 57.571 37.037 5.46 0.00 0.00 3.51
5518 6399 7.520798 TCTTGCCCATATTGTCAAATCTAGAT 58.479 34.615 0.00 0.00 0.00 1.98
5564 6446 1.946267 CACCGTGTACTGGGCAAAC 59.054 57.895 9.16 0.00 0.00 2.93
5575 6457 3.377172 GCCATCTAAATTAAGCACCGTGT 59.623 43.478 0.00 0.00 0.00 4.49
5580 6462 5.241506 TGCTATGGCCATCTAAATTAAGCAC 59.758 40.000 24.81 5.37 37.74 4.40
5603 6485 5.059833 GGGTAGAGGAATTATCAGCAGTTG 58.940 45.833 0.00 0.00 0.00 3.16
5629 6511 4.081185 TGCTGAGCAATCCGGCGA 62.081 61.111 9.30 0.00 38.70 5.54
5630 6512 2.906182 TAGTGCTGAGCAATCCGGCG 62.906 60.000 11.85 0.00 41.47 6.46
5631 6513 1.153369 TAGTGCTGAGCAATCCGGC 60.153 57.895 11.85 0.00 41.47 6.13
5632 6514 0.108186 TGTAGTGCTGAGCAATCCGG 60.108 55.000 11.85 0.00 41.47 5.14
5633 6515 1.284657 CTGTAGTGCTGAGCAATCCG 58.715 55.000 11.85 0.00 41.47 4.18
5634 6516 2.393271 ACTGTAGTGCTGAGCAATCC 57.607 50.000 11.85 0.00 41.47 3.01
5636 6518 3.332919 CTGAACTGTAGTGCTGAGCAAT 58.667 45.455 13.30 13.30 41.47 3.56
5654 6538 3.244078 CCTACAAGTGTAACACAGGCTGA 60.244 47.826 23.66 0.00 41.43 4.26
5657 6541 2.038033 TCCCTACAAGTGTAACACAGGC 59.962 50.000 0.00 0.00 41.43 4.85
5658 6542 4.253685 CATCCCTACAAGTGTAACACAGG 58.746 47.826 0.00 0.00 41.43 4.00
5693 6577 8.913487 AATCCCGGTAGGTACATAAAAATTAG 57.087 34.615 0.00 0.00 36.75 1.73
5742 6626 3.016736 AGAGAGAGAGAAAGAAGAGGCG 58.983 50.000 0.00 0.00 0.00 5.52
5770 6654 0.530744 TTCGATTGAGGCGCTAGTGT 59.469 50.000 7.64 0.00 0.00 3.55
5777 6661 2.476185 GGTCAATGTTTCGATTGAGGCG 60.476 50.000 0.00 0.00 41.85 5.52
5790 6708 2.020720 TGCGTGTTTTCAGGTCAATGT 58.979 42.857 0.00 0.00 37.90 2.71
5795 6713 1.400242 GCATCTGCGTGTTTTCAGGTC 60.400 52.381 0.00 0.00 37.90 3.85
5811 6729 5.659440 TTCAGGGGTTTTCATTTAGCATC 57.341 39.130 0.00 0.00 0.00 3.91
5821 6739 3.366985 CCTGCGTATTTTCAGGGGTTTTC 60.367 47.826 0.51 0.00 44.64 2.29
5829 6747 2.253603 GCAAAGCCTGCGTATTTTCAG 58.746 47.619 0.00 0.00 42.37 3.02
5840 6758 1.008538 GACGGTTGTGCAAAGCCTG 60.009 57.895 8.28 4.31 0.00 4.85
5841 6759 1.152963 AGACGGTTGTGCAAAGCCT 60.153 52.632 8.28 0.00 0.00 4.58
5842 6760 1.166531 AGAGACGGTTGTGCAAAGCC 61.167 55.000 0.00 0.00 0.00 4.35
5843 6761 0.040958 CAGAGACGGTTGTGCAAAGC 60.041 55.000 0.00 0.00 0.00 3.51
5844 6762 0.040958 GCAGAGACGGTTGTGCAAAG 60.041 55.000 5.82 0.00 37.31 2.77
5869 6787 7.362315 CCTGAAGAATGATTGCACTTGAATACA 60.362 37.037 0.00 0.00 0.00 2.29
5871 6789 6.660521 ACCTGAAGAATGATTGCACTTGAATA 59.339 34.615 0.00 0.00 0.00 1.75
5872 6790 5.479375 ACCTGAAGAATGATTGCACTTGAAT 59.521 36.000 0.00 0.00 0.00 2.57
5873 6791 4.828939 ACCTGAAGAATGATTGCACTTGAA 59.171 37.500 0.00 0.00 0.00 2.69
5874 6792 4.401022 ACCTGAAGAATGATTGCACTTGA 58.599 39.130 0.00 0.00 0.00 3.02
5916 6834 2.051345 GTCAAAACGCCACCGCAG 60.051 61.111 0.00 0.00 38.22 5.18
5921 6839 1.880027 AGAATCTGGTCAAAACGCCAC 59.120 47.619 0.00 0.00 0.00 5.01
5940 6858 7.138692 AGATTTCAGTTGCTGCTAAAGTTAG 57.861 36.000 0.00 0.00 0.00 2.34
5945 6863 4.984161 GCAAAGATTTCAGTTGCTGCTAAA 59.016 37.500 0.00 0.00 43.40 1.85
5955 6873 3.548818 GCGTGTTCTGCAAAGATTTCAGT 60.549 43.478 0.00 0.00 0.00 3.41


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.