Multiple sequence alignment - TraesCS2B01G333600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G333600 chr2B 100.000 5788 0 0 1 5788 477327294 477333081 0.000000e+00 10689.0
1 TraesCS2B01G333600 chr2D 93.555 5198 147 79 441 5512 403208966 403214101 0.000000e+00 7570.0
2 TraesCS2B01G333600 chr2D 92.857 182 6 3 5614 5788 381902595 381902414 2.070000e-64 257.0
3 TraesCS2B01G333600 chr2D 85.256 156 4 3 247 389 403208780 403208929 6.050000e-30 143.0
4 TraesCS2B01G333600 chr2A 92.783 4642 165 60 987 5535 540451927 540456491 0.000000e+00 6560.0
5 TraesCS2B01G333600 chr2A 89.943 527 20 19 441 942 540451083 540451601 0.000000e+00 649.0
6 TraesCS2B01G333600 chr2A 96.244 213 8 0 35 247 629997057 629996845 3.320000e-92 350.0
7 TraesCS2B01G333600 chr2A 85.207 169 9 6 236 391 540450887 540451052 6.000000e-35 159.0
8 TraesCS2B01G333600 chr4D 76.000 775 141 38 4040 4784 464537996 464538755 5.510000e-95 359.0
9 TraesCS2B01G333600 chr4B 75.871 775 142 38 4040 4784 580855519 580856278 2.570000e-93 353.0
10 TraesCS2B01G333600 chr4B 95.305 213 10 0 35 247 519045109 519044897 7.180000e-89 339.0
11 TraesCS2B01G333600 chr3A 94.521 219 12 0 35 253 693587463 693587245 7.180000e-89 339.0
12 TraesCS2B01G333600 chr3A 92.683 41 2 1 5384 5423 542201926 542201966 2.250000e-04 58.4
13 TraesCS2B01G333600 chr3B 95.305 213 9 1 35 247 114828576 114828365 2.580000e-88 337.0
14 TraesCS2B01G333600 chr3B 92.488 213 16 0 35 247 819582105 819581893 7.290000e-79 305.0
15 TraesCS2B01G333600 chr3B 94.253 174 9 1 5616 5788 402599856 402600029 1.240000e-66 265.0
16 TraesCS2B01G333600 chr4A 94.366 213 12 0 35 247 711666596 711666808 1.560000e-85 327.0
17 TraesCS2B01G333600 chr5B 89.011 273 11 5 1 255 430666482 430666753 2.600000e-83 320.0
18 TraesCS2B01G333600 chrUn 92.488 213 16 0 35 247 307014486 307014274 7.290000e-79 305.0
19 TraesCS2B01G333600 chrUn 92.019 213 17 0 35 247 223358106 223358318 3.390000e-77 300.0
20 TraesCS2B01G333600 chr7D 93.407 182 5 3 5614 5788 299509283 299509464 4.450000e-66 263.0
21 TraesCS2B01G333600 chr7D 92.857 182 6 3 5614 5788 274169381 274169562 2.070000e-64 257.0
22 TraesCS2B01G333600 chr6B 93.678 174 9 2 5616 5788 477768020 477767848 5.750000e-65 259.0
23 TraesCS2B01G333600 chr5D 92.857 182 6 3 5614 5788 72193012 72193193 2.070000e-64 257.0
24 TraesCS2B01G333600 chr5D 93.642 173 10 1 5614 5785 265974686 265974858 2.070000e-64 257.0
25 TraesCS2B01G333600 chr5D 89.333 75 4 3 3515 3587 7502600 7502528 2.220000e-14 91.6
26 TraesCS2B01G333600 chr3D 92.857 182 6 3 5614 5788 425337793 425337974 2.070000e-64 257.0
27 TraesCS2B01G333600 chr1A 92.857 182 6 2 5614 5788 593579468 593579287 2.070000e-64 257.0
28 TraesCS2B01G333600 chr5A 89.333 75 4 3 3515 3587 4957643 4957571 2.220000e-14 91.6


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G333600 chr2B 477327294 477333081 5787 False 10689.0 10689 100.0000 1 5788 1 chr2B.!!$F1 5787
1 TraesCS2B01G333600 chr2D 403208780 403214101 5321 False 3856.5 7570 89.4055 247 5512 2 chr2D.!!$F1 5265
2 TraesCS2B01G333600 chr2A 540450887 540456491 5604 False 2456.0 6560 89.3110 236 5535 3 chr2A.!!$F1 5299
3 TraesCS2B01G333600 chr4D 464537996 464538755 759 False 359.0 359 76.0000 4040 4784 1 chr4D.!!$F1 744
4 TraesCS2B01G333600 chr4B 580855519 580856278 759 False 353.0 353 75.8710 4040 4784 1 chr4B.!!$F1 744

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
221 222 0.037697 GACCGGCCCAAATTTGAACC 60.038 55.0 19.86 17.4 0.00 3.62 F
230 231 0.040781 AAATTTGAACCGACGCACCG 60.041 50.0 0.00 0.0 0.00 4.94 F
950 1028 0.108329 ATTTCGTGTCCGGCGATCTT 60.108 50.0 9.30 0.0 38.21 2.40 F
1435 1795 0.667993 CTTCCCTGCTGCGTTTGAAA 59.332 50.0 0.00 0.0 0.00 2.69 F
2819 3213 0.809241 GTGCGCAAGATCCAGGAGAG 60.809 60.0 14.00 0.0 43.02 3.20 F
3301 3732 1.018226 CGCTGGAGGAGAACAAGCTG 61.018 60.0 0.00 0.0 0.00 4.24 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1287 1647 0.035915 GCTCCTTGACCTCCACCTTC 60.036 60.000 0.00 0.00 0.0 3.46 R
1452 1812 1.065102 CGATTCAAAGATGCAGCCAGG 59.935 52.381 0.00 0.00 0.0 4.45 R
2868 3262 0.472471 GGATGATTCGGTGGGGCTTA 59.528 55.000 0.00 0.00 0.0 3.09 R
3140 3552 0.668535 AAAACGCTTTCCTCAGGCAC 59.331 50.000 0.00 0.00 0.0 5.01 R
3975 4410 0.462225 TTTGCAACGGTCGACAGGAA 60.462 50.000 19.84 9.57 0.0 3.36 R
4856 5306 0.036294 CTTTCCCTGAGACGTTCCCC 60.036 60.000 0.00 0.00 0.0 4.81 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
92 93 3.853330 CAAGCGCGACCCGTCATG 61.853 66.667 12.10 0.00 39.71 3.07
104 105 4.760047 GTCATGGACGCGGGCTGT 62.760 66.667 12.47 0.00 0.00 4.40
105 106 4.015406 TCATGGACGCGGGCTGTT 62.015 61.111 12.47 0.00 0.00 3.16
106 107 3.803082 CATGGACGCGGGCTGTTG 61.803 66.667 12.47 0.00 0.00 3.33
110 111 4.980805 GACGCGGGCTGTTGGTCA 62.981 66.667 12.47 0.00 0.00 4.02
111 112 4.555709 ACGCGGGCTGTTGGTCAA 62.556 61.111 12.47 0.00 0.00 3.18
112 113 4.025401 CGCGGGCTGTTGGTCAAC 62.025 66.667 0.00 6.87 41.50 3.18
113 114 4.025401 GCGGGCTGTTGGTCAACG 62.025 66.667 8.98 5.62 43.94 4.10
114 115 4.025401 CGGGCTGTTGGTCAACGC 62.025 66.667 16.30 16.30 43.94 4.84
115 116 2.904866 GGGCTGTTGGTCAACGCA 60.905 61.111 21.77 4.31 43.94 5.24
116 117 2.331451 GGCTGTTGGTCAACGCAC 59.669 61.111 21.77 13.17 43.94 5.34
117 118 2.052237 GCTGTTGGTCAACGCACG 60.052 61.111 18.24 0.00 43.94 5.34
118 119 2.530497 GCTGTTGGTCAACGCACGA 61.530 57.895 18.24 0.37 43.94 4.35
119 120 1.564622 CTGTTGGTCAACGCACGAG 59.435 57.895 8.98 0.00 43.94 4.18
120 121 0.874175 CTGTTGGTCAACGCACGAGA 60.874 55.000 8.98 0.00 43.94 4.04
121 122 0.874175 TGTTGGTCAACGCACGAGAG 60.874 55.000 8.98 0.00 43.94 3.20
122 123 1.300620 TTGGTCAACGCACGAGAGG 60.301 57.895 0.00 0.00 0.00 3.69
123 124 1.740332 TTGGTCAACGCACGAGAGGA 61.740 55.000 0.00 0.00 0.00 3.71
124 125 1.444553 GGTCAACGCACGAGAGGAG 60.445 63.158 0.00 0.00 0.00 3.69
125 126 1.444553 GTCAACGCACGAGAGGAGG 60.445 63.158 0.00 0.00 0.00 4.30
126 127 2.811317 CAACGCACGAGAGGAGGC 60.811 66.667 0.00 0.00 0.00 4.70
127 128 3.303135 AACGCACGAGAGGAGGCA 61.303 61.111 0.00 0.00 0.00 4.75
128 129 2.650116 AACGCACGAGAGGAGGCAT 61.650 57.895 0.00 0.00 0.00 4.40
129 130 1.320344 AACGCACGAGAGGAGGCATA 61.320 55.000 0.00 0.00 0.00 3.14
130 131 1.320344 ACGCACGAGAGGAGGCATAA 61.320 55.000 0.00 0.00 0.00 1.90
131 132 0.596083 CGCACGAGAGGAGGCATAAG 60.596 60.000 0.00 0.00 0.00 1.73
132 133 0.249657 GCACGAGAGGAGGCATAAGG 60.250 60.000 0.00 0.00 0.00 2.69
133 134 1.403814 CACGAGAGGAGGCATAAGGA 58.596 55.000 0.00 0.00 0.00 3.36
134 135 1.067821 CACGAGAGGAGGCATAAGGAC 59.932 57.143 0.00 0.00 0.00 3.85
135 136 0.312416 CGAGAGGAGGCATAAGGACG 59.688 60.000 0.00 0.00 0.00 4.79
136 137 1.693627 GAGAGGAGGCATAAGGACGA 58.306 55.000 0.00 0.00 0.00 4.20
137 138 2.032620 GAGAGGAGGCATAAGGACGAA 58.967 52.381 0.00 0.00 0.00 3.85
138 139 2.035321 GAGAGGAGGCATAAGGACGAAG 59.965 54.545 0.00 0.00 0.00 3.79
139 140 0.466124 AGGAGGCATAAGGACGAAGC 59.534 55.000 0.00 0.00 0.00 3.86
140 141 0.876342 GGAGGCATAAGGACGAAGCG 60.876 60.000 0.00 0.00 0.00 4.68
141 142 0.876342 GAGGCATAAGGACGAAGCGG 60.876 60.000 0.00 0.00 0.00 5.52
142 143 1.153429 GGCATAAGGACGAAGCGGT 60.153 57.895 0.00 0.00 0.00 5.68
143 144 0.103572 GGCATAAGGACGAAGCGGTA 59.896 55.000 0.00 0.00 0.00 4.02
144 145 1.206523 GCATAAGGACGAAGCGGTAC 58.793 55.000 0.00 0.00 0.00 3.34
159 160 0.725117 GGTACGTTCAAAGGATGCCG 59.275 55.000 0.00 0.00 0.00 5.69
160 161 0.096454 GTACGTTCAAAGGATGCCGC 59.904 55.000 0.00 0.00 0.00 6.53
161 162 0.320858 TACGTTCAAAGGATGCCGCA 60.321 50.000 0.00 0.00 0.00 5.69
162 163 0.960364 ACGTTCAAAGGATGCCGCAT 60.960 50.000 5.28 5.28 0.00 4.73
163 164 0.248215 CGTTCAAAGGATGCCGCATC 60.248 55.000 22.92 22.92 39.87 3.91
177 178 4.889112 CATCCAGCGGCAGGGCAT 62.889 66.667 11.78 0.00 34.64 4.40
178 179 3.170672 ATCCAGCGGCAGGGCATA 61.171 61.111 11.78 0.00 34.64 3.14
179 180 2.756042 ATCCAGCGGCAGGGCATAA 61.756 57.895 11.78 0.00 34.64 1.90
180 181 2.283143 ATCCAGCGGCAGGGCATAAA 62.283 55.000 11.78 0.00 34.64 1.40
181 182 2.774799 CCAGCGGCAGGGCATAAAC 61.775 63.158 3.05 0.00 34.64 2.01
182 183 2.045708 CAGCGGCAGGGCATAAACA 61.046 57.895 1.45 0.00 34.64 2.83
183 184 1.750399 AGCGGCAGGGCATAAACAG 60.750 57.895 1.45 0.00 34.64 3.16
184 185 1.748879 GCGGCAGGGCATAAACAGA 60.749 57.895 0.00 0.00 0.00 3.41
185 186 1.103398 GCGGCAGGGCATAAACAGAT 61.103 55.000 0.00 0.00 0.00 2.90
186 187 0.947244 CGGCAGGGCATAAACAGATC 59.053 55.000 0.00 0.00 0.00 2.75
187 188 0.947244 GGCAGGGCATAAACAGATCG 59.053 55.000 0.00 0.00 0.00 3.69
188 189 1.475034 GGCAGGGCATAAACAGATCGA 60.475 52.381 0.00 0.00 0.00 3.59
189 190 1.869767 GCAGGGCATAAACAGATCGAG 59.130 52.381 0.00 0.00 0.00 4.04
190 191 1.869767 CAGGGCATAAACAGATCGAGC 59.130 52.381 0.00 0.00 0.00 5.03
191 192 0.861837 GGGCATAAACAGATCGAGCG 59.138 55.000 0.00 0.00 0.00 5.03
192 193 0.861837 GGCATAAACAGATCGAGCGG 59.138 55.000 0.00 0.00 0.00 5.52
193 194 0.233332 GCATAAACAGATCGAGCGGC 59.767 55.000 0.00 0.00 0.00 6.53
194 195 1.858091 CATAAACAGATCGAGCGGCT 58.142 50.000 0.00 0.00 0.00 5.52
195 196 2.862530 GCATAAACAGATCGAGCGGCTA 60.863 50.000 0.60 0.00 0.00 3.93
196 197 2.486951 TAAACAGATCGAGCGGCTAC 57.513 50.000 0.60 0.00 0.00 3.58
197 198 0.525668 AAACAGATCGAGCGGCTACG 60.526 55.000 0.60 8.96 44.63 3.51
215 216 3.061848 CGCTGACCGGCCCAAATT 61.062 61.111 0.00 0.00 0.00 1.82
216 217 2.635443 CGCTGACCGGCCCAAATTT 61.635 57.895 0.00 0.00 0.00 1.82
217 218 1.079888 GCTGACCGGCCCAAATTTG 60.080 57.895 11.40 11.40 0.00 2.32
218 219 1.531739 GCTGACCGGCCCAAATTTGA 61.532 55.000 19.86 0.00 0.00 2.69
219 220 0.965439 CTGACCGGCCCAAATTTGAA 59.035 50.000 19.86 0.00 0.00 2.69
220 221 0.676736 TGACCGGCCCAAATTTGAAC 59.323 50.000 19.86 10.39 0.00 3.18
221 222 0.037697 GACCGGCCCAAATTTGAACC 60.038 55.000 19.86 17.40 0.00 3.62
222 223 1.080161 CCGGCCCAAATTTGAACCG 60.080 57.895 29.79 29.79 42.36 4.44
223 224 1.528292 CCGGCCCAAATTTGAACCGA 61.528 55.000 34.41 0.00 44.11 4.69
224 225 0.388006 CGGCCCAAATTTGAACCGAC 60.388 55.000 31.59 14.81 44.11 4.79
225 226 0.388006 GGCCCAAATTTGAACCGACG 60.388 55.000 19.86 0.73 0.00 5.12
226 227 1.006825 GCCCAAATTTGAACCGACGC 61.007 55.000 19.86 5.48 0.00 5.19
227 228 0.312416 CCCAAATTTGAACCGACGCA 59.688 50.000 19.86 0.00 0.00 5.24
228 229 1.404477 CCAAATTTGAACCGACGCAC 58.596 50.000 19.86 0.00 0.00 5.34
229 230 1.404477 CAAATTTGAACCGACGCACC 58.596 50.000 13.08 0.00 0.00 5.01
230 231 0.040781 AAATTTGAACCGACGCACCG 60.041 50.000 0.00 0.00 0.00 4.94
242 243 3.346606 GCACCGGCGCCTATAAGC 61.347 66.667 26.68 16.95 0.00 3.09
262 263 2.287103 GCGCCCTTTGTTATACACTAGC 59.713 50.000 0.00 0.00 0.00 3.42
306 307 4.440250 CCTCCAATGTTCTCTGTACTACCG 60.440 50.000 0.00 0.00 0.00 4.02
374 389 2.228582 CACCGGTTTTCATCAAGATGCA 59.771 45.455 2.97 0.00 38.65 3.96
375 390 2.228822 ACCGGTTTTCATCAAGATGCAC 59.771 45.455 0.00 2.60 38.65 4.57
376 391 2.415893 CCGGTTTTCATCAAGATGCACC 60.416 50.000 5.19 9.59 38.65 5.01
377 392 2.489329 CGGTTTTCATCAAGATGCACCT 59.511 45.455 16.84 0.00 38.65 4.00
378 393 3.689161 CGGTTTTCATCAAGATGCACCTA 59.311 43.478 16.84 0.00 38.65 3.08
379 394 4.437390 CGGTTTTCATCAAGATGCACCTAC 60.437 45.833 16.84 7.59 38.65 3.18
380 395 4.458989 GGTTTTCATCAAGATGCACCTACA 59.541 41.667 5.19 0.00 38.65 2.74
381 396 5.048083 GGTTTTCATCAAGATGCACCTACAA 60.048 40.000 5.19 0.00 38.65 2.41
382 397 6.446318 GTTTTCATCAAGATGCACCTACAAA 58.554 36.000 5.19 0.00 38.65 2.83
383 398 5.627499 TTCATCAAGATGCACCTACAAAC 57.373 39.130 5.19 0.00 38.65 2.93
384 399 4.650734 TCATCAAGATGCACCTACAAACA 58.349 39.130 5.19 0.00 38.65 2.83
385 400 5.255687 TCATCAAGATGCACCTACAAACAT 58.744 37.500 5.19 0.00 38.65 2.71
386 401 5.355071 TCATCAAGATGCACCTACAAACATC 59.645 40.000 5.19 0.00 39.35 3.06
387 402 4.650734 TCAAGATGCACCTACAAACATCA 58.349 39.130 0.00 0.00 41.08 3.07
388 403 5.069318 TCAAGATGCACCTACAAACATCAA 58.931 37.500 0.00 0.00 41.08 2.57
389 404 5.711506 TCAAGATGCACCTACAAACATCAAT 59.288 36.000 0.00 0.00 41.08 2.57
390 405 6.209192 TCAAGATGCACCTACAAACATCAATT 59.791 34.615 0.00 0.00 41.08 2.32
391 406 6.594788 AGATGCACCTACAAACATCAATTT 57.405 33.333 0.00 0.00 41.08 1.82
392 407 6.996509 AGATGCACCTACAAACATCAATTTT 58.003 32.000 0.00 0.00 41.08 1.82
393 408 7.444299 AGATGCACCTACAAACATCAATTTTT 58.556 30.769 0.00 0.00 41.08 1.94
433 448 7.537306 CCTACAAACACCAATTAAAACGATGAG 59.463 37.037 0.00 0.00 0.00 2.90
488 533 1.361197 CCCCCTGGGTTTTATTGAGGT 59.639 52.381 12.71 0.00 38.25 3.85
489 534 2.456577 CCCCTGGGTTTTATTGAGGTG 58.543 52.381 12.71 0.00 0.00 4.00
490 535 2.225267 CCCCTGGGTTTTATTGAGGTGT 60.225 50.000 12.71 0.00 0.00 4.16
491 536 3.010808 CCCCTGGGTTTTATTGAGGTGTA 59.989 47.826 12.71 0.00 0.00 2.90
492 537 4.014406 CCCTGGGTTTTATTGAGGTGTAC 58.986 47.826 3.97 0.00 0.00 2.90
735 795 3.535962 GCGCTCCCTCTCCCTCTG 61.536 72.222 0.00 0.00 0.00 3.35
736 796 3.535962 CGCTCCCTCTCCCTCTGC 61.536 72.222 0.00 0.00 0.00 4.26
737 797 3.160748 GCTCCCTCTCCCTCTGCC 61.161 72.222 0.00 0.00 0.00 4.85
738 798 2.695597 CTCCCTCTCCCTCTGCCT 59.304 66.667 0.00 0.00 0.00 4.75
739 799 1.457455 CTCCCTCTCCCTCTGCCTC 60.457 68.421 0.00 0.00 0.00 4.70
740 800 1.938596 TCCCTCTCCCTCTGCCTCT 60.939 63.158 0.00 0.00 0.00 3.69
741 801 1.761667 CCCTCTCCCTCTGCCTCTG 60.762 68.421 0.00 0.00 0.00 3.35
742 802 2.433994 CCTCTCCCTCTGCCTCTGC 61.434 68.421 0.00 0.00 38.26 4.26
781 841 2.069430 GCTCTCCTCCCTCCCAAGG 61.069 68.421 0.00 0.00 42.95 3.61
824 895 2.691409 TATATAATGCGCTCCCAGCC 57.309 50.000 9.73 0.00 38.18 4.85
865 937 2.747436 CAGCAGAAAAGAAAACAGGGC 58.253 47.619 0.00 0.00 0.00 5.19
866 938 2.363359 CAGCAGAAAAGAAAACAGGGCT 59.637 45.455 0.00 0.00 0.00 5.19
906 982 1.482593 CAGAGCGAGAAACATACCCCT 59.517 52.381 0.00 0.00 0.00 4.79
950 1028 0.108329 ATTTCGTGTCCGGCGATCTT 60.108 50.000 9.30 0.00 38.21 2.40
957 1035 1.134907 TGTCCGGCGATCTTAACCTTC 60.135 52.381 9.30 0.00 0.00 3.46
958 1036 1.136500 GTCCGGCGATCTTAACCTTCT 59.864 52.381 9.30 0.00 0.00 2.85
959 1037 1.829222 TCCGGCGATCTTAACCTTCTT 59.171 47.619 9.30 0.00 0.00 2.52
960 1038 3.025978 TCCGGCGATCTTAACCTTCTTA 58.974 45.455 9.30 0.00 0.00 2.10
961 1039 3.448301 TCCGGCGATCTTAACCTTCTTAA 59.552 43.478 9.30 0.00 0.00 1.85
1030 1390 2.364842 AGCTGCTGGGGAGATCGT 60.365 61.111 0.00 0.00 0.00 3.73
1163 1523 4.353437 GACGGTGCGGTCGAAGGT 62.353 66.667 0.00 0.00 0.00 3.50
1397 1757 0.896226 GAGACGGACCCAAGTAAGCT 59.104 55.000 0.00 0.00 0.00 3.74
1435 1795 0.667993 CTTCCCTGCTGCGTTTGAAA 59.332 50.000 0.00 0.00 0.00 2.69
1437 1797 1.327303 TCCCTGCTGCGTTTGAAATT 58.673 45.000 0.00 0.00 0.00 1.82
1438 1798 1.000385 TCCCTGCTGCGTTTGAAATTG 60.000 47.619 0.00 0.00 0.00 2.32
1439 1799 1.000385 CCCTGCTGCGTTTGAAATTGA 60.000 47.619 0.00 0.00 0.00 2.57
1440 1800 2.545532 CCCTGCTGCGTTTGAAATTGAA 60.546 45.455 0.00 0.00 0.00 2.69
1441 1801 3.319755 CCTGCTGCGTTTGAAATTGAAT 58.680 40.909 0.00 0.00 0.00 2.57
1442 1802 3.742369 CCTGCTGCGTTTGAAATTGAATT 59.258 39.130 0.00 0.00 0.00 2.17
1445 1805 3.181541 GCTGCGTTTGAAATTGAATTCCG 60.182 43.478 2.27 0.00 0.00 4.30
1447 1807 3.733224 TGCGTTTGAAATTGAATTCCGTG 59.267 39.130 2.27 0.00 0.00 4.94
1449 1809 3.121113 CGTTTGAAATTGAATTCCGTGGC 59.879 43.478 2.27 0.00 0.00 5.01
1451 1811 1.548269 TGAAATTGAATTCCGTGGCCC 59.452 47.619 0.00 0.00 0.00 5.80
1452 1812 0.901827 AAATTGAATTCCGTGGCCCC 59.098 50.000 0.00 0.00 0.00 5.80
1453 1813 0.975556 AATTGAATTCCGTGGCCCCC 60.976 55.000 0.00 0.00 0.00 5.40
1454 1814 1.874299 ATTGAATTCCGTGGCCCCCT 61.874 55.000 0.00 0.00 0.00 4.79
1630 2000 2.600173 CACGGCCACCAACCCAAT 60.600 61.111 2.24 0.00 0.00 3.16
1713 2083 7.905604 TGTTTGTCTCGAGTATCAAAATCAT 57.094 32.000 23.01 0.00 32.81 2.45
1841 2212 1.446272 GTGGTTCGAGAAGCGGGAG 60.446 63.158 9.96 0.00 41.36 4.30
2341 2712 4.941263 TCTTCTTCCTCTCTTCTCTTCTCG 59.059 45.833 0.00 0.00 0.00 4.04
2354 2725 3.969250 TTCTCGTTGATGGCCGCCC 62.969 63.158 7.03 0.00 0.00 6.13
2381 2763 2.762234 GCGTCGACTCCACCGATCT 61.762 63.158 14.70 0.00 38.38 2.75
2405 2787 9.295224 TCTATCCATCCATCCATCCAATAAATA 57.705 33.333 0.00 0.00 0.00 1.40
2408 2790 7.768643 TCCATCCATCCATCCAATAAATACTT 58.231 34.615 0.00 0.00 0.00 2.24
2682 3076 4.025858 ATGCCGCTGCTGGTGAGT 62.026 61.111 0.70 0.00 38.71 3.41
2688 3082 2.320587 GCTGCTGGTGAGTTCCGTG 61.321 63.158 0.00 0.00 0.00 4.94
2691 3085 1.668151 GCTGGTGAGTTCCGTGTCC 60.668 63.158 0.00 0.00 0.00 4.02
2819 3213 0.809241 GTGCGCAAGATCCAGGAGAG 60.809 60.000 14.00 0.00 43.02 3.20
2868 3262 3.071602 CCCCCGACATCATCAAGAGTAAT 59.928 47.826 0.00 0.00 0.00 1.89
2875 3269 5.625150 ACATCATCAAGAGTAATAAGCCCC 58.375 41.667 0.00 0.00 0.00 5.80
2876 3270 5.132648 ACATCATCAAGAGTAATAAGCCCCA 59.867 40.000 0.00 0.00 0.00 4.96
2878 3272 3.926058 TCAAGAGTAATAAGCCCCACC 57.074 47.619 0.00 0.00 0.00 4.61
2879 3273 2.169769 TCAAGAGTAATAAGCCCCACCG 59.830 50.000 0.00 0.00 0.00 4.94
2885 3294 3.394606 AGTAATAAGCCCCACCGAATCAT 59.605 43.478 0.00 0.00 0.00 2.45
3110 3522 2.645838 AGCTTCCAAAACAGAGCTGA 57.354 45.000 4.21 0.00 43.37 4.26
3119 3531 4.335315 CCAAAACAGAGCTGAACAACTGTA 59.665 41.667 4.21 0.00 41.73 2.74
3301 3732 1.018226 CGCTGGAGGAGAACAAGCTG 61.018 60.000 0.00 0.00 0.00 4.24
3409 3840 2.920912 TTCTTCCTGACGGCCGGT 60.921 61.111 31.76 15.52 0.00 5.28
3577 4008 2.034879 CGGCGTTCACCAGCTCATT 61.035 57.895 0.00 0.00 0.00 2.57
3612 4043 3.431486 GCCTCTCTGAACATTCCGATTCT 60.431 47.826 0.00 0.00 0.00 2.40
3911 4342 3.077556 AACCTCTGGCGGCTCGAT 61.078 61.111 11.43 0.00 0.00 3.59
3975 4410 2.555757 GCTTCAGTTCAAATGGCTCTGT 59.444 45.455 0.00 0.00 0.00 3.41
4088 4523 2.496341 CTCCGGCTGCTCATCGAA 59.504 61.111 0.00 0.00 0.00 3.71
4158 4593 3.755628 GGTGCGAGGCCTACGTGA 61.756 66.667 20.69 9.33 0.00 4.35
4505 4946 3.295273 AGCCTCACGCAGACGACA 61.295 61.111 0.00 0.00 43.93 4.35
4805 5255 2.029838 AGCCCGCAGAGAGTAAATTG 57.970 50.000 0.00 0.00 0.00 2.32
4836 5286 3.193479 GTGGGAATTTTTCAGCCTCGATT 59.807 43.478 0.00 0.00 0.00 3.34
4848 5298 1.401905 GCCTCGATTTACTTTGGGCAG 59.598 52.381 2.01 0.00 38.16 4.85
4849 5299 2.017049 CCTCGATTTACTTTGGGCAGG 58.983 52.381 0.00 0.00 0.00 4.85
4850 5300 1.401905 CTCGATTTACTTTGGGCAGGC 59.598 52.381 0.00 0.00 0.00 4.85
4851 5301 0.455815 CGATTTACTTTGGGCAGGCC 59.544 55.000 5.91 5.91 0.00 5.19
4852 5302 0.455815 GATTTACTTTGGGCAGGCCG 59.544 55.000 8.81 0.00 36.85 6.13
4853 5303 1.604147 ATTTACTTTGGGCAGGCCGC 61.604 55.000 8.81 10.60 41.28 6.53
4854 5304 2.985539 TTTACTTTGGGCAGGCCGCA 62.986 55.000 18.87 3.31 45.17 5.69
4855 5305 3.918253 TACTTTGGGCAGGCCGCAG 62.918 63.158 18.87 9.06 45.17 5.18
4880 5332 3.367190 GGAACGTCTCAGGGAAAGTAGAC 60.367 52.174 0.00 0.00 35.97 2.59
4884 5336 3.256136 CGTCTCAGGGAAAGTAGACAAGT 59.744 47.826 0.00 0.00 38.60 3.16
4885 5337 4.262079 CGTCTCAGGGAAAGTAGACAAGTT 60.262 45.833 0.00 0.00 38.60 2.66
4886 5338 5.231702 GTCTCAGGGAAAGTAGACAAGTTC 58.768 45.833 0.00 0.00 38.56 3.01
4888 5340 2.737252 CAGGGAAAGTAGACAAGTTCGC 59.263 50.000 0.00 0.00 34.22 4.70
4889 5341 2.633481 AGGGAAAGTAGACAAGTTCGCT 59.367 45.455 0.00 0.00 38.15 4.93
4890 5342 2.737252 GGGAAAGTAGACAAGTTCGCTG 59.263 50.000 0.00 0.00 32.06 5.18
4891 5343 3.554337 GGGAAAGTAGACAAGTTCGCTGA 60.554 47.826 0.00 0.00 32.06 4.26
4893 5345 4.547532 GAAAGTAGACAAGTTCGCTGAGA 58.452 43.478 0.00 0.00 0.00 3.27
4895 5347 2.095668 AGTAGACAAGTTCGCTGAGACG 60.096 50.000 0.00 0.00 0.00 4.18
4898 5350 1.452399 GACAAGTTCGCTGAGACGTTC 59.548 52.381 0.00 0.00 0.00 3.95
4900 5352 1.190323 CAAGTTCGCTGAGACGTTCAC 59.810 52.381 0.00 0.00 0.00 3.18
4902 5354 1.878088 AGTTCGCTGAGACGTTCACTA 59.122 47.619 0.00 0.00 0.00 2.74
4903 5355 1.977412 GTTCGCTGAGACGTTCACTAC 59.023 52.381 0.00 0.00 0.00 2.73
5055 5521 2.839486 TCCGACAGATGCTTGAAACT 57.161 45.000 0.00 0.00 0.00 2.66
5062 5528 5.613360 CGACAGATGCTTGAAACTTGTGTAG 60.613 44.000 0.00 0.00 0.00 2.74
5090 5556 9.739276 TCAATGGAAAATAATTCAGAGTACTGT 57.261 29.630 0.00 0.00 43.81 3.55
5237 5706 7.547370 CACAAGGGAAACTAATTCAACAAAACA 59.453 33.333 0.00 0.00 39.98 2.83
5337 5824 5.438761 AGGCATACCAAATATCGAAAAGC 57.561 39.130 0.00 0.00 39.06 3.51
5355 5842 4.882671 AAGCAAAACTGTGTAGACTGTG 57.117 40.909 3.24 0.00 34.70 3.66
5392 5880 7.169476 GGAATGGTTTAGCTAAGTATCTCGAAC 59.831 40.741 6.24 0.00 0.00 3.95
5395 5883 6.376299 TGGTTTAGCTAAGTATCTCGAACAGA 59.624 38.462 6.24 0.00 34.78 3.41
5404 5892 9.360093 CTAAGTATCTCGAACAGATTTTTGTCT 57.640 33.333 0.00 0.00 38.95 3.41
5478 5966 9.232473 AGTATGAAGAAAGGAAACAATAAGTCC 57.768 33.333 0.00 0.00 0.00 3.85
5535 6024 3.179599 GGAAAACAAAACGATGCAAGACG 59.820 43.478 9.16 9.16 0.00 4.18
5536 6025 1.753956 AACAAAACGATGCAAGACGC 58.246 45.000 10.33 0.00 42.89 5.19
5537 6026 0.040425 ACAAAACGATGCAAGACGCC 60.040 50.000 10.33 0.00 41.33 5.68
5538 6027 0.238289 CAAAACGATGCAAGACGCCT 59.762 50.000 10.33 0.00 41.33 5.52
5539 6028 0.238289 AAAACGATGCAAGACGCCTG 59.762 50.000 10.33 0.00 41.33 4.85
5540 6029 0.884704 AAACGATGCAAGACGCCTGT 60.885 50.000 10.33 0.00 41.33 4.00
5541 6030 1.568612 AACGATGCAAGACGCCTGTG 61.569 55.000 10.33 0.00 41.33 3.66
5542 6031 2.743752 CGATGCAAGACGCCTGTGG 61.744 63.158 0.00 0.00 41.33 4.17
5543 6032 2.360350 ATGCAAGACGCCTGTGGG 60.360 61.111 0.00 0.00 41.33 4.61
5544 6033 3.925630 ATGCAAGACGCCTGTGGGG 62.926 63.158 0.00 0.00 41.33 4.96
5545 6034 4.329545 GCAAGACGCCTGTGGGGA 62.330 66.667 7.66 0.00 39.07 4.81
5546 6035 2.046892 CAAGACGCCTGTGGGGAG 60.047 66.667 7.66 0.00 39.07 4.30
5547 6036 3.322466 AAGACGCCTGTGGGGAGG 61.322 66.667 7.66 0.00 39.30 4.30
5548 6037 4.640690 AGACGCCTGTGGGGAGGT 62.641 66.667 7.66 0.00 39.30 3.85
5551 6040 4.394712 CGCCTGTGGGGAGGTGTC 62.395 72.222 0.00 0.00 38.61 3.67
5552 6041 3.249189 GCCTGTGGGGAGGTGTCA 61.249 66.667 0.00 0.00 37.23 3.58
5553 6042 2.829384 GCCTGTGGGGAGGTGTCAA 61.829 63.158 0.00 0.00 37.23 3.18
5554 6043 1.073199 CCTGTGGGGAGGTGTCAAC 59.927 63.158 0.00 0.00 37.23 3.18
5555 6044 1.418908 CCTGTGGGGAGGTGTCAACT 61.419 60.000 0.00 0.00 37.23 3.16
5556 6045 1.348064 CTGTGGGGAGGTGTCAACTA 58.652 55.000 0.00 0.00 0.00 2.24
5557 6046 1.002087 CTGTGGGGAGGTGTCAACTAC 59.998 57.143 0.00 0.00 0.00 2.73
5558 6047 1.349067 GTGGGGAGGTGTCAACTACT 58.651 55.000 0.00 0.00 0.00 2.57
5559 6048 1.697982 GTGGGGAGGTGTCAACTACTT 59.302 52.381 0.00 0.00 0.00 2.24
5560 6049 1.697432 TGGGGAGGTGTCAACTACTTG 59.303 52.381 0.00 0.00 0.00 3.16
5561 6050 1.003233 GGGGAGGTGTCAACTACTTGG 59.997 57.143 0.00 0.00 0.00 3.61
5562 6051 1.003233 GGGAGGTGTCAACTACTTGGG 59.997 57.143 0.00 0.00 0.00 4.12
5563 6052 1.003233 GGAGGTGTCAACTACTTGGGG 59.997 57.143 0.00 0.00 0.00 4.96
5564 6053 1.003233 GAGGTGTCAACTACTTGGGGG 59.997 57.143 0.00 0.00 0.00 5.40
5565 6054 0.608308 GGTGTCAACTACTTGGGGGC 60.608 60.000 0.00 0.00 0.00 5.80
5566 6055 0.953960 GTGTCAACTACTTGGGGGCG 60.954 60.000 0.00 0.00 0.00 6.13
5567 6056 2.038837 GTCAACTACTTGGGGGCGC 61.039 63.158 0.00 0.00 0.00 6.53
5568 6057 2.221299 TCAACTACTTGGGGGCGCT 61.221 57.895 7.64 0.00 0.00 5.92
5569 6058 2.040544 CAACTACTTGGGGGCGCTG 61.041 63.158 7.64 0.00 0.00 5.18
5570 6059 2.221299 AACTACTTGGGGGCGCTGA 61.221 57.895 7.64 0.00 0.00 4.26
5571 6060 2.185310 AACTACTTGGGGGCGCTGAG 62.185 60.000 7.64 0.81 0.00 3.35
5572 6061 2.284331 TACTTGGGGGCGCTGAGA 60.284 61.111 7.64 0.00 0.00 3.27
5573 6062 2.303549 CTACTTGGGGGCGCTGAGAG 62.304 65.000 7.64 1.97 0.00 3.20
5574 6063 3.710722 CTTGGGGGCGCTGAGAGT 61.711 66.667 7.64 0.00 0.00 3.24
5575 6064 3.249189 TTGGGGGCGCTGAGAGTT 61.249 61.111 7.64 0.00 0.00 3.01
5576 6065 3.551496 TTGGGGGCGCTGAGAGTTG 62.551 63.158 7.64 0.00 0.00 3.16
5577 6066 3.706373 GGGGGCGCTGAGAGTTGA 61.706 66.667 7.64 0.00 0.00 3.18
5578 6067 2.586792 GGGGCGCTGAGAGTTGAT 59.413 61.111 7.64 0.00 0.00 2.57
5579 6068 1.817099 GGGGCGCTGAGAGTTGATG 60.817 63.158 7.64 0.00 0.00 3.07
5580 6069 1.817099 GGGCGCTGAGAGTTGATGG 60.817 63.158 7.64 0.00 0.00 3.51
5581 6070 1.817099 GGCGCTGAGAGTTGATGGG 60.817 63.158 7.64 0.00 0.00 4.00
5582 6071 2.467826 GCGCTGAGAGTTGATGGGC 61.468 63.158 0.00 0.00 0.00 5.36
5583 6072 2.169789 CGCTGAGAGTTGATGGGCG 61.170 63.158 0.00 0.00 35.54 6.13
5584 6073 1.219124 GCTGAGAGTTGATGGGCGA 59.781 57.895 0.00 0.00 0.00 5.54
5585 6074 1.086634 GCTGAGAGTTGATGGGCGAC 61.087 60.000 0.00 0.00 0.00 5.19
5599 6088 2.360350 CGACCAACTGCAGGCCAT 60.360 61.111 19.93 0.00 0.00 4.40
5600 6089 2.401766 CGACCAACTGCAGGCCATC 61.402 63.158 19.93 9.28 0.00 3.51
5601 6090 2.036256 ACCAACTGCAGGCCATCC 59.964 61.111 19.93 0.00 0.00 3.51
5602 6091 2.036098 CCAACTGCAGGCCATCCA 59.964 61.111 19.93 0.00 33.74 3.41
5603 6092 2.050350 CCAACTGCAGGCCATCCAG 61.050 63.158 19.93 10.70 33.74 3.86
5604 6093 2.362120 AACTGCAGGCCATCCAGC 60.362 61.111 19.93 0.80 44.31 4.85
5608 6097 2.812499 GCAGGCCATCCAGCAATG 59.188 61.111 5.01 0.00 43.59 2.82
5609 6098 2.812499 CAGGCCATCCAGCAATGC 59.188 61.111 5.01 0.00 33.74 3.56
5610 6099 2.443390 AGGCCATCCAGCAATGCC 60.443 61.111 5.01 0.00 33.74 4.40
5611 6100 2.760799 GGCCATCCAGCAATGCCA 60.761 61.111 0.00 0.00 0.00 4.92
5612 6101 2.497770 GCCATCCAGCAATGCCAC 59.502 61.111 0.00 0.00 0.00 5.01
5613 6102 3.085119 GCCATCCAGCAATGCCACC 62.085 63.158 0.00 0.00 0.00 4.61
5614 6103 2.428925 CCATCCAGCAATGCCACCC 61.429 63.158 0.00 0.00 0.00 4.61
5615 6104 2.440796 ATCCAGCAATGCCACCCG 60.441 61.111 0.00 0.00 0.00 5.28
5616 6105 4.738998 TCCAGCAATGCCACCCGG 62.739 66.667 0.00 0.00 0.00 5.73
5618 6107 3.443045 CAGCAATGCCACCCGGTC 61.443 66.667 0.00 0.00 33.28 4.79
5619 6108 3.650950 AGCAATGCCACCCGGTCT 61.651 61.111 0.00 0.00 33.28 3.85
5620 6109 2.270850 GCAATGCCACCCGGTCTA 59.729 61.111 0.00 0.00 33.28 2.59
5621 6110 1.819632 GCAATGCCACCCGGTCTAG 60.820 63.158 0.00 0.00 33.28 2.43
5622 6111 1.602237 CAATGCCACCCGGTCTAGT 59.398 57.895 0.00 0.00 33.28 2.57
5623 6112 0.035439 CAATGCCACCCGGTCTAGTT 60.035 55.000 0.00 0.00 33.28 2.24
5624 6113 1.208535 CAATGCCACCCGGTCTAGTTA 59.791 52.381 0.00 0.00 33.28 2.24
5625 6114 1.802553 ATGCCACCCGGTCTAGTTAT 58.197 50.000 0.00 0.00 33.28 1.89
5626 6115 1.117150 TGCCACCCGGTCTAGTTATC 58.883 55.000 0.00 0.00 33.28 1.75
5627 6116 0.031721 GCCACCCGGTCTAGTTATCG 59.968 60.000 0.00 0.00 33.28 2.92
5628 6117 1.683943 CCACCCGGTCTAGTTATCGA 58.316 55.000 0.00 0.00 0.00 3.59
5629 6118 2.236766 CCACCCGGTCTAGTTATCGAT 58.763 52.381 2.16 2.16 0.00 3.59
5630 6119 2.626743 CCACCCGGTCTAGTTATCGATT 59.373 50.000 1.71 0.00 0.00 3.34
5631 6120 3.552273 CCACCCGGTCTAGTTATCGATTG 60.552 52.174 1.71 0.00 0.00 2.67
5632 6121 2.035576 ACCCGGTCTAGTTATCGATTGC 59.964 50.000 1.71 0.00 0.00 3.56
5633 6122 2.609737 CCCGGTCTAGTTATCGATTGCC 60.610 54.545 1.71 0.00 0.00 4.52
5634 6123 2.296471 CCGGTCTAGTTATCGATTGCCT 59.704 50.000 1.71 0.00 0.00 4.75
5635 6124 3.504906 CCGGTCTAGTTATCGATTGCCTA 59.495 47.826 1.71 0.85 0.00 3.93
5636 6125 4.379603 CCGGTCTAGTTATCGATTGCCTAG 60.380 50.000 1.71 10.74 0.00 3.02
5637 6126 4.379603 CGGTCTAGTTATCGATTGCCTAGG 60.380 50.000 1.71 3.67 0.00 3.02
5638 6127 4.082136 GGTCTAGTTATCGATTGCCTAGGG 60.082 50.000 11.72 0.00 0.00 3.53
5639 6128 4.765856 GTCTAGTTATCGATTGCCTAGGGA 59.234 45.833 11.72 4.36 0.00 4.20
5640 6129 4.765856 TCTAGTTATCGATTGCCTAGGGAC 59.234 45.833 11.72 0.00 0.00 4.46
5641 6130 3.305720 AGTTATCGATTGCCTAGGGACA 58.694 45.455 11.72 0.00 0.00 4.02
5642 6131 3.709653 AGTTATCGATTGCCTAGGGACAA 59.290 43.478 11.72 7.62 0.00 3.18
5643 6132 4.163458 AGTTATCGATTGCCTAGGGACAAA 59.837 41.667 11.72 0.00 0.00 2.83
5644 6133 3.864789 ATCGATTGCCTAGGGACAAAT 57.135 42.857 11.72 0.00 0.00 2.32
5645 6134 4.974645 ATCGATTGCCTAGGGACAAATA 57.025 40.909 11.72 0.00 0.00 1.40
5646 6135 4.764050 TCGATTGCCTAGGGACAAATAA 57.236 40.909 11.72 0.00 0.00 1.40
5647 6136 4.448210 TCGATTGCCTAGGGACAAATAAC 58.552 43.478 11.72 0.00 0.00 1.89
5648 6137 4.163458 TCGATTGCCTAGGGACAAATAACT 59.837 41.667 11.72 0.00 0.00 2.24
5649 6138 4.881850 CGATTGCCTAGGGACAAATAACTT 59.118 41.667 11.72 0.00 0.00 2.66
5650 6139 5.357032 CGATTGCCTAGGGACAAATAACTTT 59.643 40.000 11.72 0.00 0.00 2.66
5651 6140 6.458342 CGATTGCCTAGGGACAAATAACTTTC 60.458 42.308 11.72 0.00 0.00 2.62
5652 6141 5.514500 TGCCTAGGGACAAATAACTTTCT 57.486 39.130 11.72 0.00 0.00 2.52
5653 6142 5.887754 TGCCTAGGGACAAATAACTTTCTT 58.112 37.500 11.72 0.00 0.00 2.52
5654 6143 5.710099 TGCCTAGGGACAAATAACTTTCTTG 59.290 40.000 11.72 0.00 0.00 3.02
5655 6144 5.710567 GCCTAGGGACAAATAACTTTCTTGT 59.289 40.000 11.72 0.00 36.02 3.16
5656 6145 6.349363 GCCTAGGGACAAATAACTTTCTTGTG 60.349 42.308 11.72 0.00 33.53 3.33
5657 6146 6.940298 CCTAGGGACAAATAACTTTCTTGTGA 59.060 38.462 0.00 0.00 33.53 3.58
5658 6147 6.635030 AGGGACAAATAACTTTCTTGTGAC 57.365 37.500 0.00 0.00 33.53 3.67
5659 6148 6.126409 AGGGACAAATAACTTTCTTGTGACA 58.874 36.000 0.00 0.00 33.53 3.58
5660 6149 6.605594 AGGGACAAATAACTTTCTTGTGACAA 59.394 34.615 0.00 0.00 33.53 3.18
5661 6150 7.123547 AGGGACAAATAACTTTCTTGTGACAAA 59.876 33.333 0.00 0.00 33.53 2.83
5662 6151 7.762159 GGGACAAATAACTTTCTTGTGACAAAA 59.238 33.333 0.00 0.00 33.53 2.44
5663 6152 9.145865 GGACAAATAACTTTCTTGTGACAAAAA 57.854 29.630 0.00 2.99 33.53 1.94
5665 6154 8.655970 ACAAATAACTTTCTTGTGACAAAAAGC 58.344 29.630 21.57 0.00 33.10 3.51
5666 6155 8.872845 CAAATAACTTTCTTGTGACAAAAAGCT 58.127 29.630 21.57 16.33 33.10 3.74
5667 6156 8.634475 AATAACTTTCTTGTGACAAAAAGCTC 57.366 30.769 21.57 0.00 33.10 4.09
5668 6157 5.904362 ACTTTCTTGTGACAAAAAGCTCT 57.096 34.783 21.57 9.13 33.10 4.09
5669 6158 5.884771 ACTTTCTTGTGACAAAAAGCTCTC 58.115 37.500 21.57 0.00 33.10 3.20
5670 6159 5.649831 ACTTTCTTGTGACAAAAAGCTCTCT 59.350 36.000 21.57 8.67 33.10 3.10
5671 6160 6.823689 ACTTTCTTGTGACAAAAAGCTCTCTA 59.176 34.615 21.57 0.00 33.10 2.43
5672 6161 6.604735 TTCTTGTGACAAAAAGCTCTCTAC 57.395 37.500 0.00 0.00 0.00 2.59
5673 6162 5.918608 TCTTGTGACAAAAAGCTCTCTACT 58.081 37.500 0.00 0.00 0.00 2.57
5674 6163 7.050970 TCTTGTGACAAAAAGCTCTCTACTA 57.949 36.000 0.00 0.00 0.00 1.82
5675 6164 7.497595 TCTTGTGACAAAAAGCTCTCTACTAA 58.502 34.615 0.00 0.00 0.00 2.24
5676 6165 7.985184 TCTTGTGACAAAAAGCTCTCTACTAAA 59.015 33.333 0.00 0.00 0.00 1.85
5677 6166 8.500753 TTGTGACAAAAAGCTCTCTACTAAAA 57.499 30.769 0.00 0.00 0.00 1.52
5678 6167 8.677148 TGTGACAAAAAGCTCTCTACTAAAAT 57.323 30.769 0.00 0.00 0.00 1.82
5679 6168 9.120538 TGTGACAAAAAGCTCTCTACTAAAATT 57.879 29.630 0.00 0.00 0.00 1.82
5711 6200 8.870075 ATTGTTTCTTTATCTAAACAGCCTCT 57.130 30.769 0.00 0.00 44.05 3.69
5712 6201 9.959721 ATTGTTTCTTTATCTAAACAGCCTCTA 57.040 29.630 0.00 0.00 44.05 2.43
5713 6202 9.436957 TTGTTTCTTTATCTAAACAGCCTCTAG 57.563 33.333 0.00 0.00 44.05 2.43
5714 6203 8.594550 TGTTTCTTTATCTAAACAGCCTCTAGT 58.405 33.333 0.00 0.00 39.88 2.57
5715 6204 9.438228 GTTTCTTTATCTAAACAGCCTCTAGTT 57.562 33.333 0.00 0.00 35.98 2.24
5724 6213 8.932791 TCTAAACAGCCTCTAGTTTTTATTTCG 58.067 33.333 0.00 0.00 38.71 3.46
5725 6214 7.506328 AAACAGCCTCTAGTTTTTATTTCGT 57.494 32.000 0.00 0.00 34.51 3.85
5726 6215 6.481954 ACAGCCTCTAGTTTTTATTTCGTG 57.518 37.500 0.00 0.00 0.00 4.35
5727 6216 5.995897 ACAGCCTCTAGTTTTTATTTCGTGT 59.004 36.000 0.00 0.00 0.00 4.49
5728 6217 6.485648 ACAGCCTCTAGTTTTTATTTCGTGTT 59.514 34.615 0.00 0.00 0.00 3.32
5729 6218 7.015877 CAGCCTCTAGTTTTTATTTCGTGTTC 58.984 38.462 0.00 0.00 0.00 3.18
5730 6219 6.935208 AGCCTCTAGTTTTTATTTCGTGTTCT 59.065 34.615 0.00 0.00 0.00 3.01
5731 6220 7.444487 AGCCTCTAGTTTTTATTTCGTGTTCTT 59.556 33.333 0.00 0.00 0.00 2.52
5732 6221 8.074370 GCCTCTAGTTTTTATTTCGTGTTCTTT 58.926 33.333 0.00 0.00 0.00 2.52
5745 6234 9.906660 ATTTCGTGTTCTTTATTATCTTGCAAA 57.093 25.926 0.00 0.00 0.00 3.68
5746 6235 8.722342 TTCGTGTTCTTTATTATCTTGCAAAC 57.278 30.769 0.00 0.00 0.00 2.93
5747 6236 7.302524 TCGTGTTCTTTATTATCTTGCAAACC 58.697 34.615 0.00 0.00 0.00 3.27
5748 6237 7.174253 TCGTGTTCTTTATTATCTTGCAAACCT 59.826 33.333 0.00 0.00 0.00 3.50
5749 6238 8.447833 CGTGTTCTTTATTATCTTGCAAACCTA 58.552 33.333 0.00 0.00 0.00 3.08
5752 6241 9.952188 GTTCTTTATTATCTTGCAAACCTATCC 57.048 33.333 0.00 0.00 0.00 2.59
5753 6242 9.920946 TTCTTTATTATCTTGCAAACCTATCCT 57.079 29.630 0.00 0.00 0.00 3.24
5758 6247 8.854614 ATTATCTTGCAAACCTATCCTATCAC 57.145 34.615 0.00 0.00 0.00 3.06
5759 6248 5.692115 TCTTGCAAACCTATCCTATCACA 57.308 39.130 0.00 0.00 0.00 3.58
5760 6249 6.061022 TCTTGCAAACCTATCCTATCACAA 57.939 37.500 0.00 0.00 0.00 3.33
5761 6250 5.880332 TCTTGCAAACCTATCCTATCACAAC 59.120 40.000 0.00 0.00 0.00 3.32
5762 6251 5.435686 TGCAAACCTATCCTATCACAACT 57.564 39.130 0.00 0.00 0.00 3.16
5763 6252 6.553953 TGCAAACCTATCCTATCACAACTA 57.446 37.500 0.00 0.00 0.00 2.24
5764 6253 6.346096 TGCAAACCTATCCTATCACAACTAC 58.654 40.000 0.00 0.00 0.00 2.73
5765 6254 6.070481 TGCAAACCTATCCTATCACAACTACA 60.070 38.462 0.00 0.00 0.00 2.74
5766 6255 6.821665 GCAAACCTATCCTATCACAACTACAA 59.178 38.462 0.00 0.00 0.00 2.41
5767 6256 7.335924 GCAAACCTATCCTATCACAACTACAAA 59.664 37.037 0.00 0.00 0.00 2.83
5768 6257 9.226606 CAAACCTATCCTATCACAACTACAAAA 57.773 33.333 0.00 0.00 0.00 2.44
5769 6258 9.975218 AAACCTATCCTATCACAACTACAAAAT 57.025 29.630 0.00 0.00 0.00 1.82
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
3 4 4.517703 CTCGCCGTCGTCGTCTCC 62.518 72.222 0.71 0.00 36.96 3.71
4 5 4.517703 CCTCGCCGTCGTCGTCTC 62.518 72.222 0.71 0.00 36.96 3.36
75 76 3.853330 CATGACGGGTCGCGCTTG 61.853 66.667 9.49 7.11 0.00 4.01
87 88 4.760047 ACAGCCCGCGTCCATGAC 62.760 66.667 4.92 0.00 0.00 3.06
88 89 4.015406 AACAGCCCGCGTCCATGA 62.015 61.111 4.92 0.00 0.00 3.07
89 90 3.803082 CAACAGCCCGCGTCCATG 61.803 66.667 4.92 0.38 0.00 3.66
93 94 4.980805 TGACCAACAGCCCGCGTC 62.981 66.667 4.92 0.00 0.00 5.19
94 95 4.555709 TTGACCAACAGCCCGCGT 62.556 61.111 4.92 0.00 0.00 6.01
95 96 4.025401 GTTGACCAACAGCCCGCG 62.025 66.667 0.00 0.00 40.84 6.46
96 97 4.025401 CGTTGACCAACAGCCCGC 62.025 66.667 12.64 0.00 41.20 6.13
97 98 4.025401 GCGTTGACCAACAGCCCG 62.025 66.667 12.64 0.45 41.20 6.13
98 99 2.904866 TGCGTTGACCAACAGCCC 60.905 61.111 18.97 5.58 41.20 5.19
99 100 2.331451 GTGCGTTGACCAACAGCC 59.669 61.111 18.97 11.39 41.20 4.85
100 101 2.052237 CGTGCGTTGACCAACAGC 60.052 61.111 12.64 14.96 41.20 4.40
101 102 0.874175 TCTCGTGCGTTGACCAACAG 60.874 55.000 12.64 6.94 41.20 3.16
102 103 0.874175 CTCTCGTGCGTTGACCAACA 60.874 55.000 12.64 0.00 41.20 3.33
103 104 1.557443 CCTCTCGTGCGTTGACCAAC 61.557 60.000 2.94 2.94 37.92 3.77
104 105 1.300620 CCTCTCGTGCGTTGACCAA 60.301 57.895 0.00 0.00 0.00 3.67
105 106 2.142357 CTCCTCTCGTGCGTTGACCA 62.142 60.000 0.00 0.00 0.00 4.02
106 107 1.444553 CTCCTCTCGTGCGTTGACC 60.445 63.158 0.00 0.00 0.00 4.02
107 108 1.444553 CCTCCTCTCGTGCGTTGAC 60.445 63.158 0.00 0.00 0.00 3.18
108 109 2.962569 CCTCCTCTCGTGCGTTGA 59.037 61.111 0.00 0.00 0.00 3.18
109 110 2.811317 GCCTCCTCTCGTGCGTTG 60.811 66.667 0.00 0.00 0.00 4.10
110 111 1.320344 TATGCCTCCTCTCGTGCGTT 61.320 55.000 0.00 0.00 0.00 4.84
111 112 1.320344 TTATGCCTCCTCTCGTGCGT 61.320 55.000 0.00 0.00 0.00 5.24
112 113 0.596083 CTTATGCCTCCTCTCGTGCG 60.596 60.000 0.00 0.00 0.00 5.34
113 114 0.249657 CCTTATGCCTCCTCTCGTGC 60.250 60.000 0.00 0.00 0.00 5.34
114 115 1.067821 GTCCTTATGCCTCCTCTCGTG 59.932 57.143 0.00 0.00 0.00 4.35
115 116 1.404843 GTCCTTATGCCTCCTCTCGT 58.595 55.000 0.00 0.00 0.00 4.18
116 117 0.312416 CGTCCTTATGCCTCCTCTCG 59.688 60.000 0.00 0.00 0.00 4.04
117 118 1.693627 TCGTCCTTATGCCTCCTCTC 58.306 55.000 0.00 0.00 0.00 3.20
118 119 2.035632 CTTCGTCCTTATGCCTCCTCT 58.964 52.381 0.00 0.00 0.00 3.69
119 120 1.539280 GCTTCGTCCTTATGCCTCCTC 60.539 57.143 0.00 0.00 0.00 3.71
120 121 0.466124 GCTTCGTCCTTATGCCTCCT 59.534 55.000 0.00 0.00 0.00 3.69
121 122 0.876342 CGCTTCGTCCTTATGCCTCC 60.876 60.000 0.00 0.00 0.00 4.30
122 123 0.876342 CCGCTTCGTCCTTATGCCTC 60.876 60.000 0.00 0.00 0.00 4.70
123 124 1.144057 CCGCTTCGTCCTTATGCCT 59.856 57.895 0.00 0.00 0.00 4.75
124 125 0.103572 TACCGCTTCGTCCTTATGCC 59.896 55.000 0.00 0.00 0.00 4.40
125 126 1.206523 GTACCGCTTCGTCCTTATGC 58.793 55.000 0.00 0.00 0.00 3.14
126 127 1.202222 ACGTACCGCTTCGTCCTTATG 60.202 52.381 0.00 0.00 35.30 1.90
127 128 1.098050 ACGTACCGCTTCGTCCTTAT 58.902 50.000 0.00 0.00 35.30 1.73
128 129 0.881118 AACGTACCGCTTCGTCCTTA 59.119 50.000 0.00 0.00 39.39 2.69
129 130 0.387750 GAACGTACCGCTTCGTCCTT 60.388 55.000 0.00 0.00 39.39 3.36
130 131 1.211190 GAACGTACCGCTTCGTCCT 59.789 57.895 0.00 0.00 39.39 3.85
131 132 0.664166 TTGAACGTACCGCTTCGTCC 60.664 55.000 0.00 0.00 39.39 4.79
132 133 1.123756 CTTTGAACGTACCGCTTCGTC 59.876 52.381 0.00 0.00 39.39 4.20
133 134 1.134226 CTTTGAACGTACCGCTTCGT 58.866 50.000 0.00 0.00 42.12 3.85
134 135 0.437295 CCTTTGAACGTACCGCTTCG 59.563 55.000 0.00 0.00 0.00 3.79
135 136 1.787012 TCCTTTGAACGTACCGCTTC 58.213 50.000 0.00 0.00 0.00 3.86
136 137 2.073816 CATCCTTTGAACGTACCGCTT 58.926 47.619 0.00 0.00 0.00 4.68
137 138 1.722011 CATCCTTTGAACGTACCGCT 58.278 50.000 0.00 0.00 0.00 5.52
138 139 0.096454 GCATCCTTTGAACGTACCGC 59.904 55.000 0.00 0.00 0.00 5.68
139 140 0.725117 GGCATCCTTTGAACGTACCG 59.275 55.000 0.00 0.00 0.00 4.02
140 141 0.725117 CGGCATCCTTTGAACGTACC 59.275 55.000 0.00 0.00 0.00 3.34
141 142 0.096454 GCGGCATCCTTTGAACGTAC 59.904 55.000 0.00 0.00 32.11 3.67
142 143 0.320858 TGCGGCATCCTTTGAACGTA 60.321 50.000 0.00 0.00 32.11 3.57
143 144 0.960364 ATGCGGCATCCTTTGAACGT 60.960 50.000 10.23 0.00 32.11 3.99
144 145 0.248215 GATGCGGCATCCTTTGAACG 60.248 55.000 28.33 0.00 35.07 3.95
145 146 3.629858 GATGCGGCATCCTTTGAAC 57.370 52.632 28.33 5.07 35.07 3.18
160 161 2.963928 TTATGCCCTGCCGCTGGATG 62.964 60.000 17.42 3.27 0.00 3.51
161 162 2.283143 TTTATGCCCTGCCGCTGGAT 62.283 55.000 17.42 6.77 0.00 3.41
162 163 2.977718 TTTATGCCCTGCCGCTGGA 61.978 57.895 17.42 0.00 0.00 3.86
163 164 2.440065 TTTATGCCCTGCCGCTGG 60.440 61.111 9.30 9.30 0.00 4.85
164 165 1.996786 CTGTTTATGCCCTGCCGCTG 61.997 60.000 0.00 0.00 0.00 5.18
165 166 1.750399 CTGTTTATGCCCTGCCGCT 60.750 57.895 0.00 0.00 0.00 5.52
166 167 1.103398 ATCTGTTTATGCCCTGCCGC 61.103 55.000 0.00 0.00 0.00 6.53
167 168 0.947244 GATCTGTTTATGCCCTGCCG 59.053 55.000 0.00 0.00 0.00 5.69
168 169 0.947244 CGATCTGTTTATGCCCTGCC 59.053 55.000 0.00 0.00 0.00 4.85
169 170 1.869767 CTCGATCTGTTTATGCCCTGC 59.130 52.381 0.00 0.00 0.00 4.85
170 171 1.869767 GCTCGATCTGTTTATGCCCTG 59.130 52.381 0.00 0.00 0.00 4.45
171 172 1.539065 CGCTCGATCTGTTTATGCCCT 60.539 52.381 0.00 0.00 0.00 5.19
172 173 0.861837 CGCTCGATCTGTTTATGCCC 59.138 55.000 0.00 0.00 0.00 5.36
173 174 0.861837 CCGCTCGATCTGTTTATGCC 59.138 55.000 0.00 0.00 0.00 4.40
174 175 0.233332 GCCGCTCGATCTGTTTATGC 59.767 55.000 0.00 0.00 0.00 3.14
175 176 1.858091 AGCCGCTCGATCTGTTTATG 58.142 50.000 0.00 0.00 0.00 1.90
176 177 2.604855 CGTAGCCGCTCGATCTGTTTAT 60.605 50.000 0.00 0.00 0.00 1.40
177 178 1.268386 CGTAGCCGCTCGATCTGTTTA 60.268 52.381 0.00 0.00 0.00 2.01
178 179 0.525668 CGTAGCCGCTCGATCTGTTT 60.526 55.000 0.00 0.00 0.00 2.83
179 180 1.064296 CGTAGCCGCTCGATCTGTT 59.936 57.895 0.00 0.00 0.00 3.16
180 181 2.716244 CGTAGCCGCTCGATCTGT 59.284 61.111 0.00 0.00 0.00 3.41
198 199 2.635443 AAATTTGGGCCGGTCAGCG 61.635 57.895 9.07 0.00 0.00 5.18
199 200 1.079888 CAAATTTGGGCCGGTCAGC 60.080 57.895 9.07 0.00 0.00 4.26
200 201 0.965439 TTCAAATTTGGGCCGGTCAG 59.035 50.000 17.90 0.00 0.00 3.51
201 202 0.676736 GTTCAAATTTGGGCCGGTCA 59.323 50.000 17.90 1.16 0.00 4.02
202 203 0.037697 GGTTCAAATTTGGGCCGGTC 60.038 55.000 17.90 0.00 0.00 4.79
203 204 1.811645 CGGTTCAAATTTGGGCCGGT 61.812 55.000 29.60 0.00 39.92 5.28
204 205 1.080161 CGGTTCAAATTTGGGCCGG 60.080 57.895 29.60 18.86 39.92 6.13
205 206 0.388006 GTCGGTTCAAATTTGGGCCG 60.388 55.000 30.54 30.54 42.58 6.13
206 207 0.388006 CGTCGGTTCAAATTTGGGCC 60.388 55.000 17.90 17.23 0.00 5.80
207 208 1.006825 GCGTCGGTTCAAATTTGGGC 61.007 55.000 17.90 10.63 0.00 5.36
208 209 0.312416 TGCGTCGGTTCAAATTTGGG 59.688 50.000 17.90 5.86 0.00 4.12
209 210 1.404477 GTGCGTCGGTTCAAATTTGG 58.596 50.000 17.90 2.25 0.00 3.28
210 211 1.404477 GGTGCGTCGGTTCAAATTTG 58.596 50.000 12.15 12.15 0.00 2.32
211 212 0.040781 CGGTGCGTCGGTTCAAATTT 60.041 50.000 0.00 0.00 0.00 1.82
212 213 1.572447 CGGTGCGTCGGTTCAAATT 59.428 52.632 0.00 0.00 0.00 1.82
213 214 2.322081 CCGGTGCGTCGGTTCAAAT 61.322 57.895 9.08 0.00 44.60 2.32
214 215 2.968156 CCGGTGCGTCGGTTCAAA 60.968 61.111 9.08 0.00 44.60 2.69
225 226 3.346606 GCTTATAGGCGCCGGTGC 61.347 66.667 31.86 31.86 0.00 5.01
233 234 1.389555 AACAAAGGGCGCTTATAGGC 58.610 50.000 17.25 0.00 0.00 3.93
234 235 5.178809 GTGTATAACAAAGGGCGCTTATAGG 59.821 44.000 17.25 9.29 0.00 2.57
235 236 5.989777 AGTGTATAACAAAGGGCGCTTATAG 59.010 40.000 17.25 12.01 0.00 1.31
236 237 5.920903 AGTGTATAACAAAGGGCGCTTATA 58.079 37.500 17.25 10.67 0.00 0.98
237 238 4.777463 AGTGTATAACAAAGGGCGCTTAT 58.223 39.130 17.25 8.95 0.00 1.73
238 239 4.210724 AGTGTATAACAAAGGGCGCTTA 57.789 40.909 17.25 0.84 0.00 3.09
239 240 3.067684 AGTGTATAACAAAGGGCGCTT 57.932 42.857 10.73 10.73 0.00 4.68
240 241 2.781681 AGTGTATAACAAAGGGCGCT 57.218 45.000 7.64 0.00 0.00 5.92
241 242 2.287103 GCTAGTGTATAACAAAGGGCGC 59.713 50.000 0.00 0.00 0.00 6.53
242 243 3.527533 TGCTAGTGTATAACAAAGGGCG 58.472 45.455 0.00 0.00 0.00 6.13
243 244 4.941873 ACTTGCTAGTGTATAACAAAGGGC 59.058 41.667 0.00 0.00 31.99 5.19
244 245 6.422776 CACTTGCTAGTGTATAACAAAGGG 57.577 41.667 18.65 0.00 45.46 3.95
262 263 8.842280 TGGAGGTAGTAACAAAAATTACACTTG 58.158 33.333 0.00 0.00 37.49 3.16
306 307 8.997621 TGGTACTCTGTTCATAAATCAGTTAC 57.002 34.615 0.00 0.00 0.00 2.50
394 409 5.771165 GGTGTTTGTAGGTATCCCTCAAAAA 59.229 40.000 4.37 0.00 41.45 1.94
395 410 5.163077 TGGTGTTTGTAGGTATCCCTCAAAA 60.163 40.000 4.37 0.00 41.45 2.44
396 411 4.351407 TGGTGTTTGTAGGTATCCCTCAAA 59.649 41.667 0.00 0.00 41.45 2.69
397 412 3.911260 TGGTGTTTGTAGGTATCCCTCAA 59.089 43.478 0.00 0.00 41.45 3.02
398 413 3.522759 TGGTGTTTGTAGGTATCCCTCA 58.477 45.455 0.00 0.00 41.45 3.86
399 414 4.563140 TTGGTGTTTGTAGGTATCCCTC 57.437 45.455 0.00 0.00 41.45 4.30
400 415 5.530176 AATTGGTGTTTGTAGGTATCCCT 57.470 39.130 0.00 0.00 45.51 4.20
401 416 7.706100 TTTAATTGGTGTTTGTAGGTATCCC 57.294 36.000 0.00 0.00 0.00 3.85
402 417 7.751793 CGTTTTAATTGGTGTTTGTAGGTATCC 59.248 37.037 0.00 0.00 0.00 2.59
403 418 8.505625 TCGTTTTAATTGGTGTTTGTAGGTATC 58.494 33.333 0.00 0.00 0.00 2.24
404 419 8.393671 TCGTTTTAATTGGTGTTTGTAGGTAT 57.606 30.769 0.00 0.00 0.00 2.73
405 420 7.798596 TCGTTTTAATTGGTGTTTGTAGGTA 57.201 32.000 0.00 0.00 0.00 3.08
433 448 3.733960 GTGGTTCGCCGCCCTTTC 61.734 66.667 0.00 0.00 41.81 2.62
488 533 0.535553 GACAACAAAGCCCCGGTACA 60.536 55.000 0.00 0.00 0.00 2.90
489 534 1.239296 GGACAACAAAGCCCCGGTAC 61.239 60.000 0.00 0.00 0.00 3.34
490 535 1.073548 GGACAACAAAGCCCCGGTA 59.926 57.895 0.00 0.00 0.00 4.02
491 536 2.203437 GGACAACAAAGCCCCGGT 60.203 61.111 0.00 0.00 0.00 5.28
492 537 3.361977 CGGACAACAAAGCCCCGG 61.362 66.667 0.00 0.00 36.81 5.73
682 738 2.813908 GGAAACCACGAGCGCGAT 60.814 61.111 19.05 1.23 41.64 4.58
729 789 2.365370 AGAGGCAGAGGCAGAGGG 60.365 66.667 0.00 0.00 43.71 4.30
732 792 2.686470 CCCAGAGGCAGAGGCAGA 60.686 66.667 0.00 0.00 43.71 4.26
733 793 1.267574 TAACCCAGAGGCAGAGGCAG 61.268 60.000 0.00 0.00 43.71 4.85
734 794 1.229496 TAACCCAGAGGCAGAGGCA 60.229 57.895 0.00 0.00 43.71 4.75
735 795 1.524482 CTAACCCAGAGGCAGAGGC 59.476 63.158 0.00 0.00 36.11 4.70
736 796 0.980231 AGCTAACCCAGAGGCAGAGG 60.980 60.000 0.00 0.00 36.11 3.69
737 797 1.410882 GTAGCTAACCCAGAGGCAGAG 59.589 57.143 0.00 0.00 36.11 3.35
738 798 1.486211 GTAGCTAACCCAGAGGCAGA 58.514 55.000 0.00 0.00 36.11 4.26
739 799 0.466124 GGTAGCTAACCCAGAGGCAG 59.534 60.000 0.00 0.00 43.16 4.85
740 800 2.604118 GGTAGCTAACCCAGAGGCA 58.396 57.895 0.00 0.00 43.16 4.75
824 895 1.751924 CCTTTCTCTCTCGTAGTGGGG 59.248 57.143 0.00 0.00 0.00 4.96
866 938 0.323629 GATCTTGGACCGGACACCAA 59.676 55.000 22.81 22.81 42.78 3.67
950 1028 2.166870 TCGGCGCAGATTAAGAAGGTTA 59.833 45.455 10.83 0.00 0.00 2.85
957 1035 1.209275 CCTCGTCGGCGCAGATTAAG 61.209 60.000 14.65 11.10 38.14 1.85
958 1036 1.226859 CCTCGTCGGCGCAGATTAA 60.227 57.895 14.65 1.44 38.14 1.40
959 1037 2.411701 CCTCGTCGGCGCAGATTA 59.588 61.111 14.65 4.05 38.14 1.75
960 1038 4.514577 CCCTCGTCGGCGCAGATT 62.515 66.667 14.65 0.00 38.14 2.40
978 1056 1.196012 CCGTAGAAAGAAGCTCCCCT 58.804 55.000 0.00 0.00 0.00 4.79
980 1058 1.549170 TGACCGTAGAAAGAAGCTCCC 59.451 52.381 0.00 0.00 0.00 4.30
981 1059 3.190874 CATGACCGTAGAAAGAAGCTCC 58.809 50.000 0.00 0.00 0.00 4.70
1131 1491 3.519930 GTCCTCCTCGACGGCCTC 61.520 72.222 0.00 0.00 0.00 4.70
1287 1647 0.035915 GCTCCTTGACCTCCACCTTC 60.036 60.000 0.00 0.00 0.00 3.46
1425 1785 3.733224 CACGGAATTCAATTTCAAACGCA 59.267 39.130 7.93 0.00 0.00 5.24
1435 1795 1.381191 GGGGGCCACGGAATTCAAT 60.381 57.895 4.39 0.00 0.00 2.57
1437 1797 2.938798 AGGGGGCCACGGAATTCA 60.939 61.111 4.39 0.00 0.00 2.57
1438 1798 2.440247 CAGGGGGCCACGGAATTC 60.440 66.667 4.39 0.00 0.00 2.17
1439 1799 4.060667 CCAGGGGGCCACGGAATT 62.061 66.667 7.77 0.00 0.00 2.17
1449 1809 2.056223 CAAAGATGCAGCCAGGGGG 61.056 63.158 0.00 0.00 37.18 5.40
1451 1811 1.407979 GATTCAAAGATGCAGCCAGGG 59.592 52.381 0.00 0.00 0.00 4.45
1452 1812 1.065102 CGATTCAAAGATGCAGCCAGG 59.935 52.381 0.00 0.00 0.00 4.45
1453 1813 2.011947 TCGATTCAAAGATGCAGCCAG 58.988 47.619 0.00 0.00 0.00 4.85
1454 1814 2.011947 CTCGATTCAAAGATGCAGCCA 58.988 47.619 0.00 0.00 0.00 4.75
1546 1906 3.782244 CACGCGCAGGTCAAGAGC 61.782 66.667 5.73 0.00 0.00 4.09
1626 1996 1.414181 ACAGAGCGATGGGTAGATTGG 59.586 52.381 0.00 0.00 0.00 3.16
1627 1997 2.898729 ACAGAGCGATGGGTAGATTG 57.101 50.000 0.00 0.00 0.00 2.67
1628 1998 3.914426 AAACAGAGCGATGGGTAGATT 57.086 42.857 0.00 0.00 0.00 2.40
1629 1999 5.070446 TCAATAAACAGAGCGATGGGTAGAT 59.930 40.000 0.00 0.00 0.00 1.98
1630 2000 4.404394 TCAATAAACAGAGCGATGGGTAGA 59.596 41.667 0.00 0.00 0.00 2.59
1679 2049 1.536766 CGAGACAAACATGCCACATGT 59.463 47.619 7.38 7.38 0.00 3.21
1713 2083 3.141398 GCTTCCATCCAATGATTCGCTA 58.859 45.455 0.00 0.00 0.00 4.26
1841 2212 4.021925 ACCAGCTCCGCCTTGACC 62.022 66.667 0.00 0.00 0.00 4.02
2381 2763 9.072460 AGTATTTATTGGATGGATGGATGGATA 57.928 33.333 0.00 0.00 0.00 2.59
2405 2787 2.030185 ACGACACTGTTGCTATCGAAGT 60.030 45.455 0.00 0.00 36.64 3.01
2408 2790 1.135489 GGACGACACTGTTGCTATCGA 60.135 52.381 0.00 0.00 36.64 3.59
2868 3262 0.472471 GGATGATTCGGTGGGGCTTA 59.528 55.000 0.00 0.00 0.00 3.09
2875 3269 2.967599 TCTCAGTGGATGATTCGGTG 57.032 50.000 0.00 0.00 37.28 4.94
2876 3270 3.004839 CGTATCTCAGTGGATGATTCGGT 59.995 47.826 4.82 0.00 37.28 4.69
2878 3272 4.489679 TCGTATCTCAGTGGATGATTCG 57.510 45.455 11.33 11.33 37.28 3.34
2879 3273 7.821652 TCTTATCGTATCTCAGTGGATGATTC 58.178 38.462 4.82 0.00 37.28 2.52
2885 3294 5.121925 GCGTATCTTATCGTATCTCAGTGGA 59.878 44.000 0.00 0.00 0.00 4.02
2961 3370 1.862806 GCGAACTTGTCCTCTGCAC 59.137 57.895 0.00 0.00 0.00 4.57
3137 3549 2.037136 CGCTTTCCTCAGGCACAGG 61.037 63.158 0.00 0.00 0.00 4.00
3140 3552 0.668535 AAAACGCTTTCCTCAGGCAC 59.331 50.000 0.00 0.00 0.00 5.01
3301 3732 1.475280 TCGTGGTAGTCCAGCATGTAC 59.525 52.381 0.00 0.00 45.24 2.90
3424 3855 2.643644 GCACAGCTCGATCGCGATC 61.644 63.158 33.93 33.93 46.80 3.69
3430 3861 2.894387 GGCAGGCACAGCTCGATC 60.894 66.667 0.00 0.00 41.93 3.69
3499 3930 3.778619 CCAGATATTGGTGGCGTCA 57.221 52.632 0.00 0.00 42.41 4.35
3565 3996 2.290260 CCAGTGGTTAATGAGCTGGTGA 60.290 50.000 0.00 0.00 41.15 4.02
3577 4008 1.180029 GAGAGGCGTACCAGTGGTTA 58.820 55.000 22.49 3.62 39.06 2.85
3612 4043 1.079266 GCCGGCCATGCAAAAATCA 60.079 52.632 18.11 0.00 0.00 2.57
3953 4384 1.808945 AGAGCCATTTGAACTGAAGCG 59.191 47.619 0.00 0.00 0.00 4.68
3960 4391 2.887152 ACAGGAACAGAGCCATTTGAAC 59.113 45.455 0.00 0.00 0.00 3.18
3975 4410 0.462225 TTTGCAACGGTCGACAGGAA 60.462 50.000 19.84 9.57 0.00 3.36
4088 4523 1.380920 GGTGGCGTAGGGGTAGTCT 60.381 63.158 0.00 0.00 0.00 3.24
4158 4593 2.440980 GGACGGGTAGTAGGCCGT 60.441 66.667 0.00 0.00 41.66 5.68
4298 4733 3.749064 AGCGTCGTGAGCACCGAT 61.749 61.111 3.96 0.00 36.62 4.18
4301 4736 4.664677 ACCAGCGTCGTGAGCACC 62.665 66.667 0.00 0.00 37.01 5.01
4302 4737 3.406361 CACCAGCGTCGTGAGCAC 61.406 66.667 0.00 0.00 37.01 4.40
4425 4860 2.823147 CTCGTACTCCGGGTCGCT 60.823 66.667 0.00 0.00 37.11 4.93
4805 5255 1.919240 AAAATTCCCACGGTCCCTTC 58.081 50.000 0.00 0.00 0.00 3.46
4836 5286 2.675075 GCGGCCTGCCCAAAGTAA 60.675 61.111 0.00 0.00 37.76 2.24
4850 5300 4.452733 GAGACGTTCCCCCTGCGG 62.453 72.222 0.00 0.00 0.00 5.69
4851 5301 3.649277 CTGAGACGTTCCCCCTGCG 62.649 68.421 0.00 0.00 0.00 5.18
4852 5302 2.266055 CTGAGACGTTCCCCCTGC 59.734 66.667 0.00 0.00 0.00 4.85
4853 5303 2.660064 CCCTGAGACGTTCCCCCTG 61.660 68.421 0.00 0.00 0.00 4.45
4854 5304 2.284699 CCCTGAGACGTTCCCCCT 60.285 66.667 0.00 0.00 0.00 4.79
4855 5305 1.486145 TTTCCCTGAGACGTTCCCCC 61.486 60.000 0.00 0.00 0.00 5.40
4856 5306 0.036294 CTTTCCCTGAGACGTTCCCC 60.036 60.000 0.00 0.00 0.00 4.81
4880 5332 1.190323 GTGAACGTCTCAGCGAACTTG 59.810 52.381 0.00 0.00 33.60 3.16
4884 5336 1.399343 CGTAGTGAACGTCTCAGCGAA 60.399 52.381 0.00 0.00 46.72 4.70
4885 5337 0.165295 CGTAGTGAACGTCTCAGCGA 59.835 55.000 0.00 0.00 46.72 4.93
4886 5338 2.626648 CGTAGTGAACGTCTCAGCG 58.373 57.895 0.00 0.00 46.72 5.18
4895 5347 1.925185 GATTCGGCCTTCGTAGTGAAC 59.075 52.381 0.00 0.00 40.32 3.18
4898 5350 1.480219 GCGATTCGGCCTTCGTAGTG 61.480 60.000 17.36 0.00 40.32 2.74
4900 5352 3.614143 GCGATTCGGCCTTCGTAG 58.386 61.111 17.36 0.12 40.32 3.51
5089 5555 5.862811 CTCAAGCATGTTTTGAGCTAGTAC 58.137 41.667 21.20 0.00 43.38 2.73
5266 5736 1.079405 CAATGCAGCTGGGCCAAAG 60.079 57.895 17.12 1.96 0.00 2.77
5267 5737 2.585341 CCAATGCAGCTGGGCCAAA 61.585 57.895 17.12 0.00 0.00 3.28
5337 5824 9.781834 TTTTTATTCACAGTCTACACAGTTTTG 57.218 29.630 0.00 0.00 0.00 2.44
5425 5913 3.805422 TGACTTGTGTATGAACGTTCACC 59.195 43.478 31.87 24.11 40.49 4.02
5426 5914 5.389516 GGATGACTTGTGTATGAACGTTCAC 60.390 44.000 31.87 20.65 40.49 3.18
5427 5915 4.688879 GGATGACTTGTGTATGAACGTTCA 59.311 41.667 31.41 31.41 42.14 3.18
5429 5917 4.637276 TGGATGACTTGTGTATGAACGTT 58.363 39.130 0.00 0.00 0.00 3.99
5512 6001 4.109050 GTCTTGCATCGTTTTGTTTTCCA 58.891 39.130 0.00 0.00 0.00 3.53
5513 6002 3.179599 CGTCTTGCATCGTTTTGTTTTCC 59.820 43.478 0.00 0.00 0.00 3.13
5515 6004 2.533942 GCGTCTTGCATCGTTTTGTTTT 59.466 40.909 0.00 0.00 45.45 2.43
5535 6024 2.829384 TTGACACCTCCCCACAGGC 61.829 63.158 0.00 0.00 36.98 4.85
5536 6025 1.073199 GTTGACACCTCCCCACAGG 59.927 63.158 0.00 0.00 39.80 4.00
5537 6026 1.002087 GTAGTTGACACCTCCCCACAG 59.998 57.143 0.00 0.00 0.00 3.66
5538 6027 1.053424 GTAGTTGACACCTCCCCACA 58.947 55.000 0.00 0.00 0.00 4.17
5539 6028 1.349067 AGTAGTTGACACCTCCCCAC 58.651 55.000 0.00 0.00 0.00 4.61
5540 6029 1.697432 CAAGTAGTTGACACCTCCCCA 59.303 52.381 4.11 0.00 35.46 4.96
5541 6030 1.003233 CCAAGTAGTTGACACCTCCCC 59.997 57.143 12.04 0.00 35.46 4.81
5542 6031 1.003233 CCCAAGTAGTTGACACCTCCC 59.997 57.143 12.04 0.00 35.46 4.30
5543 6032 1.003233 CCCCAAGTAGTTGACACCTCC 59.997 57.143 12.04 0.00 35.46 4.30
5544 6033 1.003233 CCCCCAAGTAGTTGACACCTC 59.997 57.143 12.04 0.00 35.46 3.85
5545 6034 1.064825 CCCCCAAGTAGTTGACACCT 58.935 55.000 12.04 0.00 35.46 4.00
5546 6035 0.608308 GCCCCCAAGTAGTTGACACC 60.608 60.000 12.04 0.00 35.46 4.16
5547 6036 0.953960 CGCCCCCAAGTAGTTGACAC 60.954 60.000 12.04 0.00 35.46 3.67
5548 6037 1.373435 CGCCCCCAAGTAGTTGACA 59.627 57.895 12.04 0.00 35.46 3.58
5549 6038 2.038837 GCGCCCCCAAGTAGTTGAC 61.039 63.158 12.04 0.00 35.46 3.18
5550 6039 2.221299 AGCGCCCCCAAGTAGTTGA 61.221 57.895 12.04 0.00 35.46 3.18
5551 6040 2.040544 CAGCGCCCCCAAGTAGTTG 61.041 63.158 2.29 3.09 0.00 3.16
5552 6041 2.185310 CTCAGCGCCCCCAAGTAGTT 62.185 60.000 2.29 0.00 0.00 2.24
5553 6042 2.606519 TCAGCGCCCCCAAGTAGT 60.607 61.111 2.29 0.00 0.00 2.73
5554 6043 2.187946 CTCAGCGCCCCCAAGTAG 59.812 66.667 2.29 0.00 0.00 2.57
5555 6044 2.284331 TCTCAGCGCCCCCAAGTA 60.284 61.111 2.29 0.00 0.00 2.24
5556 6045 3.710722 CTCTCAGCGCCCCCAAGT 61.711 66.667 2.29 0.00 0.00 3.16
5557 6046 3.259633 AACTCTCAGCGCCCCCAAG 62.260 63.158 2.29 0.00 0.00 3.61
5558 6047 3.249189 AACTCTCAGCGCCCCCAA 61.249 61.111 2.29 0.00 0.00 4.12
5559 6048 4.020617 CAACTCTCAGCGCCCCCA 62.021 66.667 2.29 0.00 0.00 4.96
5560 6049 3.036429 ATCAACTCTCAGCGCCCCC 62.036 63.158 2.29 0.00 0.00 5.40
5561 6050 1.817099 CATCAACTCTCAGCGCCCC 60.817 63.158 2.29 0.00 0.00 5.80
5562 6051 1.817099 CCATCAACTCTCAGCGCCC 60.817 63.158 2.29 0.00 0.00 6.13
5563 6052 1.817099 CCCATCAACTCTCAGCGCC 60.817 63.158 2.29 0.00 0.00 6.53
5564 6053 2.467826 GCCCATCAACTCTCAGCGC 61.468 63.158 0.00 0.00 0.00 5.92
5565 6054 2.169789 CGCCCATCAACTCTCAGCG 61.170 63.158 0.00 0.00 35.82 5.18
5566 6055 1.086634 GTCGCCCATCAACTCTCAGC 61.087 60.000 0.00 0.00 0.00 4.26
5567 6056 0.460987 GGTCGCCCATCAACTCTCAG 60.461 60.000 0.00 0.00 0.00 3.35
5568 6057 1.191489 TGGTCGCCCATCAACTCTCA 61.191 55.000 0.00 0.00 35.17 3.27
5569 6058 0.036388 TTGGTCGCCCATCAACTCTC 60.036 55.000 0.00 0.00 41.49 3.20
5570 6059 0.321653 GTTGGTCGCCCATCAACTCT 60.322 55.000 0.00 0.00 41.49 3.24
5571 6060 0.321653 AGTTGGTCGCCCATCAACTC 60.322 55.000 3.56 0.00 45.24 3.01
5572 6061 1.761174 AGTTGGTCGCCCATCAACT 59.239 52.632 3.56 3.56 44.08 3.16
5573 6062 1.875963 CAGTTGGTCGCCCATCAAC 59.124 57.895 0.00 0.00 41.49 3.18
5574 6063 1.971167 GCAGTTGGTCGCCCATCAA 60.971 57.895 0.00 0.00 41.49 2.57
5575 6064 2.359850 GCAGTTGGTCGCCCATCA 60.360 61.111 0.00 0.00 41.49 3.07
5576 6065 2.359850 TGCAGTTGGTCGCCCATC 60.360 61.111 0.00 0.00 41.49 3.51
5577 6066 2.360350 CTGCAGTTGGTCGCCCAT 60.360 61.111 5.25 0.00 41.49 4.00
5578 6067 4.641645 CCTGCAGTTGGTCGCCCA 62.642 66.667 13.81 0.00 39.65 5.36
5582 6071 2.360350 ATGGCCTGCAGTTGGTCG 60.360 61.111 13.81 0.00 30.50 4.79
5583 6072 2.048603 GGATGGCCTGCAGTTGGTC 61.049 63.158 13.81 0.00 0.00 4.02
5584 6073 2.036256 GGATGGCCTGCAGTTGGT 59.964 61.111 13.81 0.00 0.00 3.67
5585 6074 2.036098 TGGATGGCCTGCAGTTGG 59.964 61.111 13.81 0.00 34.31 3.77
5586 6075 3.599584 CTGGATGGCCTGCAGTTG 58.400 61.111 13.81 0.00 38.44 3.16
5592 6081 2.792947 GGCATTGCTGGATGGCCTG 61.793 63.158 3.32 0.00 44.30 4.85
5593 6082 2.443390 GGCATTGCTGGATGGCCT 60.443 61.111 3.32 0.00 44.30 5.19
5596 6085 2.428925 GGGTGGCATTGCTGGATGG 61.429 63.158 8.82 0.00 0.00 3.51
5597 6086 2.777972 CGGGTGGCATTGCTGGATG 61.778 63.158 8.82 0.00 0.00 3.51
5598 6087 2.440796 CGGGTGGCATTGCTGGAT 60.441 61.111 8.82 0.00 0.00 3.41
5599 6088 4.738998 CCGGGTGGCATTGCTGGA 62.739 66.667 8.82 0.00 0.00 3.86
5601 6090 2.535485 TAGACCGGGTGGCATTGCTG 62.535 60.000 3.30 0.00 39.70 4.41
5602 6091 2.257409 CTAGACCGGGTGGCATTGCT 62.257 60.000 3.30 0.00 39.70 3.91
5603 6092 1.819632 CTAGACCGGGTGGCATTGC 60.820 63.158 3.30 0.00 39.70 3.56
5604 6093 0.035439 AACTAGACCGGGTGGCATTG 60.035 55.000 3.30 0.00 39.70 2.82
5605 6094 1.575419 TAACTAGACCGGGTGGCATT 58.425 50.000 3.30 0.00 39.70 3.56
5606 6095 1.692519 GATAACTAGACCGGGTGGCAT 59.307 52.381 3.30 0.00 39.70 4.40
5607 6096 1.117150 GATAACTAGACCGGGTGGCA 58.883 55.000 3.30 0.00 39.70 4.92
5608 6097 0.031721 CGATAACTAGACCGGGTGGC 59.968 60.000 3.30 0.00 39.70 5.01
5609 6098 1.683943 TCGATAACTAGACCGGGTGG 58.316 55.000 3.30 0.00 42.84 4.61
5610 6099 3.639538 CAATCGATAACTAGACCGGGTG 58.360 50.000 3.30 0.00 0.00 4.61
5611 6100 2.035576 GCAATCGATAACTAGACCGGGT 59.964 50.000 6.32 0.00 0.00 5.28
5612 6101 2.609737 GGCAATCGATAACTAGACCGGG 60.610 54.545 6.32 0.00 0.00 5.73
5613 6102 2.296471 AGGCAATCGATAACTAGACCGG 59.704 50.000 0.00 0.00 0.00 5.28
5614 6103 3.644884 AGGCAATCGATAACTAGACCG 57.355 47.619 0.00 0.00 0.00 4.79
5615 6104 4.082136 CCCTAGGCAATCGATAACTAGACC 60.082 50.000 22.47 8.86 34.50 3.85
5616 6105 4.765856 TCCCTAGGCAATCGATAACTAGAC 59.234 45.833 22.47 6.15 34.50 2.59
5617 6106 4.765856 GTCCCTAGGCAATCGATAACTAGA 59.234 45.833 22.47 9.22 34.50 2.43
5618 6107 4.523173 TGTCCCTAGGCAATCGATAACTAG 59.477 45.833 17.46 17.46 0.00 2.57
5619 6108 4.476297 TGTCCCTAGGCAATCGATAACTA 58.524 43.478 2.05 0.97 0.00 2.24
5620 6109 3.305720 TGTCCCTAGGCAATCGATAACT 58.694 45.455 2.05 0.00 0.00 2.24
5621 6110 3.746045 TGTCCCTAGGCAATCGATAAC 57.254 47.619 2.05 0.00 0.00 1.89
5622 6111 4.764050 TTTGTCCCTAGGCAATCGATAA 57.236 40.909 2.05 0.00 0.00 1.75
5623 6112 4.974645 ATTTGTCCCTAGGCAATCGATA 57.025 40.909 2.05 0.00 0.00 2.92
5624 6113 3.864789 ATTTGTCCCTAGGCAATCGAT 57.135 42.857 2.05 0.00 0.00 3.59
5625 6114 4.163458 AGTTATTTGTCCCTAGGCAATCGA 59.837 41.667 2.05 0.00 0.00 3.59
5626 6115 4.451900 AGTTATTTGTCCCTAGGCAATCG 58.548 43.478 2.05 0.00 0.00 3.34
5627 6116 6.603599 AGAAAGTTATTTGTCCCTAGGCAATC 59.396 38.462 2.05 0.00 0.00 2.67
5628 6117 6.494059 AGAAAGTTATTTGTCCCTAGGCAAT 58.506 36.000 2.05 1.34 0.00 3.56
5629 6118 5.887754 AGAAAGTTATTTGTCCCTAGGCAA 58.112 37.500 2.05 0.00 0.00 4.52
5630 6119 5.514500 AGAAAGTTATTTGTCCCTAGGCA 57.486 39.130 2.05 0.00 0.00 4.75
5631 6120 5.710567 ACAAGAAAGTTATTTGTCCCTAGGC 59.289 40.000 2.05 0.00 29.55 3.93
5632 6121 6.940298 TCACAAGAAAGTTATTTGTCCCTAGG 59.060 38.462 0.06 0.06 33.06 3.02
5633 6122 7.444183 TGTCACAAGAAAGTTATTTGTCCCTAG 59.556 37.037 2.80 0.00 33.06 3.02
5634 6123 7.284074 TGTCACAAGAAAGTTATTTGTCCCTA 58.716 34.615 2.80 0.00 33.06 3.53
5635 6124 6.126409 TGTCACAAGAAAGTTATTTGTCCCT 58.874 36.000 2.80 0.00 33.06 4.20
5636 6125 6.385649 TGTCACAAGAAAGTTATTTGTCCC 57.614 37.500 2.80 0.00 33.06 4.46
5637 6126 8.696410 TTTTGTCACAAGAAAGTTATTTGTCC 57.304 30.769 0.00 0.00 33.06 4.02
5639 6128 8.655970 GCTTTTTGTCACAAGAAAGTTATTTGT 58.344 29.630 18.42 0.42 35.56 2.83
5640 6129 8.872845 AGCTTTTTGTCACAAGAAAGTTATTTG 58.127 29.630 18.42 0.00 32.97 2.32
5641 6130 9.087424 GAGCTTTTTGTCACAAGAAAGTTATTT 57.913 29.630 18.42 7.13 32.97 1.40
5642 6131 8.470002 AGAGCTTTTTGTCACAAGAAAGTTATT 58.530 29.630 18.42 8.49 32.97 1.40
5643 6132 8.000780 AGAGCTTTTTGTCACAAGAAAGTTAT 57.999 30.769 18.42 11.82 32.97 1.89
5644 6133 7.336931 AGAGAGCTTTTTGTCACAAGAAAGTTA 59.663 33.333 18.42 0.00 32.97 2.24
5645 6134 6.151817 AGAGAGCTTTTTGTCACAAGAAAGTT 59.848 34.615 18.42 15.14 32.97 2.66
5646 6135 5.649831 AGAGAGCTTTTTGTCACAAGAAAGT 59.350 36.000 18.42 10.57 32.97 2.66
5647 6136 6.129053 AGAGAGCTTTTTGTCACAAGAAAG 57.871 37.500 15.38 15.38 33.41 2.62
5648 6137 6.823689 AGTAGAGAGCTTTTTGTCACAAGAAA 59.176 34.615 0.00 0.00 0.00 2.52
5649 6138 6.349300 AGTAGAGAGCTTTTTGTCACAAGAA 58.651 36.000 0.00 0.00 0.00 2.52
5650 6139 5.918608 AGTAGAGAGCTTTTTGTCACAAGA 58.081 37.500 0.00 0.00 0.00 3.02
5651 6140 7.715265 TTAGTAGAGAGCTTTTTGTCACAAG 57.285 36.000 0.00 0.00 0.00 3.16
5652 6141 8.500753 TTTTAGTAGAGAGCTTTTTGTCACAA 57.499 30.769 0.00 0.00 0.00 3.33
5653 6142 8.677148 ATTTTAGTAGAGAGCTTTTTGTCACA 57.323 30.769 0.00 0.00 0.00 3.58
5685 6174 9.301897 AGAGGCTGTTTAGATAAAGAAACAATT 57.698 29.630 0.00 0.00 43.11 2.32
5686 6175 8.870075 AGAGGCTGTTTAGATAAAGAAACAAT 57.130 30.769 0.00 0.00 43.11 2.71
5687 6176 9.436957 CTAGAGGCTGTTTAGATAAAGAAACAA 57.563 33.333 0.00 0.00 43.11 2.83
5688 6177 8.594550 ACTAGAGGCTGTTTAGATAAAGAAACA 58.405 33.333 0.00 0.00 41.90 2.83
5689 6178 9.438228 AACTAGAGGCTGTTTAGATAAAGAAAC 57.562 33.333 0.00 0.00 36.33 2.78
5698 6187 8.932791 CGAAATAAAAACTAGAGGCTGTTTAGA 58.067 33.333 0.00 0.00 35.63 2.10
5699 6188 8.718734 ACGAAATAAAAACTAGAGGCTGTTTAG 58.281 33.333 0.00 0.00 35.63 1.85
5700 6189 8.500773 CACGAAATAAAAACTAGAGGCTGTTTA 58.499 33.333 0.00 0.00 35.63 2.01
5701 6190 7.012989 ACACGAAATAAAAACTAGAGGCTGTTT 59.987 33.333 0.00 0.00 37.92 2.83
5702 6191 6.485648 ACACGAAATAAAAACTAGAGGCTGTT 59.514 34.615 0.00 0.00 0.00 3.16
5703 6192 5.995897 ACACGAAATAAAAACTAGAGGCTGT 59.004 36.000 0.00 0.00 0.00 4.40
5704 6193 6.481954 ACACGAAATAAAAACTAGAGGCTG 57.518 37.500 0.00 0.00 0.00 4.85
5705 6194 6.935208 AGAACACGAAATAAAAACTAGAGGCT 59.065 34.615 0.00 0.00 0.00 4.58
5706 6195 7.130303 AGAACACGAAATAAAAACTAGAGGC 57.870 36.000 0.00 0.00 0.00 4.70
5719 6208 9.906660 TTTGCAAGATAATAAAGAACACGAAAT 57.093 25.926 0.00 0.00 0.00 2.17
5720 6209 9.176181 GTTTGCAAGATAATAAAGAACACGAAA 57.824 29.630 0.00 0.00 0.00 3.46
5721 6210 7.806014 GGTTTGCAAGATAATAAAGAACACGAA 59.194 33.333 0.00 0.00 0.00 3.85
5722 6211 7.174253 AGGTTTGCAAGATAATAAAGAACACGA 59.826 33.333 0.00 0.00 0.00 4.35
5723 6212 7.305474 AGGTTTGCAAGATAATAAAGAACACG 58.695 34.615 0.00 0.00 0.00 4.49
5726 6215 9.952188 GGATAGGTTTGCAAGATAATAAAGAAC 57.048 33.333 0.00 0.00 0.00 3.01
5727 6216 9.920946 AGGATAGGTTTGCAAGATAATAAAGAA 57.079 29.630 0.00 0.00 0.00 2.52
5732 6221 9.944376 GTGATAGGATAGGTTTGCAAGATAATA 57.056 33.333 0.00 0.00 0.00 0.98
5733 6222 8.439971 TGTGATAGGATAGGTTTGCAAGATAAT 58.560 33.333 0.00 0.00 0.00 1.28
5734 6223 7.801104 TGTGATAGGATAGGTTTGCAAGATAA 58.199 34.615 0.00 0.00 0.00 1.75
5735 6224 7.373617 TGTGATAGGATAGGTTTGCAAGATA 57.626 36.000 0.00 0.00 0.00 1.98
5736 6225 6.252599 TGTGATAGGATAGGTTTGCAAGAT 57.747 37.500 0.00 0.00 0.00 2.40
5737 6226 5.692115 TGTGATAGGATAGGTTTGCAAGA 57.308 39.130 0.00 0.00 0.00 3.02
5738 6227 5.882557 AGTTGTGATAGGATAGGTTTGCAAG 59.117 40.000 0.00 0.00 0.00 4.01
5739 6228 5.815581 AGTTGTGATAGGATAGGTTTGCAA 58.184 37.500 0.00 0.00 0.00 4.08
5740 6229 5.435686 AGTTGTGATAGGATAGGTTTGCA 57.564 39.130 0.00 0.00 0.00 4.08
5741 6230 6.346096 TGTAGTTGTGATAGGATAGGTTTGC 58.654 40.000 0.00 0.00 0.00 3.68
5742 6231 8.786826 TTTGTAGTTGTGATAGGATAGGTTTG 57.213 34.615 0.00 0.00 0.00 2.93
5743 6232 9.975218 ATTTTGTAGTTGTGATAGGATAGGTTT 57.025 29.630 0.00 0.00 0.00 3.27


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.