Multiple sequence alignment - TraesCS2B01G323800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G323800 chr2B 100.000 4600 0 0 1 4600 462950606 462946007 0.000000e+00 8495.0
1 TraesCS2B01G323800 chr2A 92.348 3071 169 32 795 3829 528119517 528116477 0.000000e+00 4309.0
2 TraesCS2B01G323800 chr2A 92.541 791 51 8 10 795 528122817 528122030 0.000000e+00 1127.0
3 TraesCS2B01G323800 chr2A 86.047 172 16 4 4171 4340 528115927 528115762 1.320000e-40 178.0
4 TraesCS2B01G323800 chr2A 80.342 234 17 18 3825 4056 528116434 528116228 2.870000e-32 150.0
5 TraesCS2B01G323800 chr2A 92.593 81 5 1 4428 4508 528115755 528115676 1.050000e-21 115.0
6 TraesCS2B01G323800 chr2A 96.970 33 1 0 4568 4600 528115674 528115642 6.430000e-04 56.5
7 TraesCS2B01G323800 chr2D 90.972 2182 148 22 1 2171 391393039 391390896 0.000000e+00 2892.0
8 TraesCS2B01G323800 chr2D 96.631 1662 53 3 2169 3829 391390110 391388451 0.000000e+00 2756.0
9 TraesCS2B01G323800 chr2D 87.719 171 13 4 4171 4340 391387901 391387738 4.700000e-45 193.0
10 TraesCS2B01G323800 chr2D 92.437 119 7 2 3940 4056 391388320 391388202 7.920000e-38 169.0
11 TraesCS2B01G323800 chr2D 97.500 80 2 0 3828 3907 391388405 391388326 2.230000e-28 137.0
12 TraesCS2B01G323800 chr2D 96.970 33 1 0 4568 4600 391387650 391387618 6.430000e-04 56.5
13 TraesCS2B01G323800 chr4A 94.872 39 2 0 4508 4546 252669149 252669187 1.380000e-05 62.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G323800 chr2B 462946007 462950606 4599 True 8495.000000 8495 100.000000 1 4600 1 chr2B.!!$R1 4599
1 TraesCS2B01G323800 chr2A 528115642 528122817 7175 True 989.250000 4309 90.140167 10 4600 6 chr2A.!!$R1 4590
2 TraesCS2B01G323800 chr2D 391387618 391393039 5421 True 1033.916667 2892 93.704833 1 4600 6 chr2D.!!$R1 4599

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
973 3499 1.011451 GCTCTCGCTCGCTCTGTTTT 61.011 55.0 0.00 0.0 0.0 2.43 F
1407 3947 0.324614 TGTCGCATGTGGAAGGATGT 59.675 50.0 6.39 0.0 0.0 3.06 F
2506 5845 0.404040 ATTGGCCGAGGAGGTTTCAA 59.596 50.0 0.00 0.0 43.7 2.69 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2059 4610 0.673437 CGGGAACAATTGCACAACCT 59.327 50.0 5.05 0.0 0.0 3.50 R
3305 6648 0.099613 CACGGATGACTCTCTCCACG 59.900 60.0 0.00 0.0 0.0 4.94 R
4150 7763 0.179012 TTTTGAGGGGAACGGGACAC 60.179 55.0 0.00 0.0 0.0 3.67 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
138 139 1.511850 TCTCGAACGGAACTACGACA 58.488 50.000 0.00 0.00 37.61 4.35
232 233 1.201855 CGTCTTGCACATTCGAGAAGC 60.202 52.381 0.00 0.00 0.00 3.86
264 265 2.280797 GACTTGCAGACGGTGGCA 60.281 61.111 0.37 0.37 38.46 4.92
314 315 2.291670 GGACTGTGGAGTAGAAGGAGGA 60.292 54.545 0.00 0.00 30.16 3.71
354 355 2.583441 CGTCTGCTGGGTGAGGGAA 61.583 63.158 0.00 0.00 0.00 3.97
375 376 1.985116 GAGGAAGCGGGAGGTGAGT 60.985 63.158 0.00 0.00 42.46 3.41
378 379 2.203788 AAGCGGGAGGTGAGTGGA 60.204 61.111 0.00 0.00 42.46 4.02
418 419 3.322318 GACAGGAGGTGGGAGCAGC 62.322 68.421 0.00 0.00 0.00 5.25
420 421 4.664267 AGGAGGTGGGAGCAGCCA 62.664 66.667 0.00 0.00 38.95 4.75
735 736 1.140652 GGCATTTGGGAGAGAGAGAGG 59.859 57.143 0.00 0.00 0.00 3.69
754 764 2.827715 GGAGATCCCGATGGTCACT 58.172 57.895 0.00 0.00 0.00 3.41
755 765 1.996798 GGAGATCCCGATGGTCACTA 58.003 55.000 0.00 0.00 0.00 2.74
757 767 2.588620 GAGATCCCGATGGTCACTACT 58.411 52.381 0.00 0.00 0.00 2.57
758 768 3.498121 GGAGATCCCGATGGTCACTACTA 60.498 52.174 0.00 0.00 0.00 1.82
759 769 3.754323 GAGATCCCGATGGTCACTACTAG 59.246 52.174 0.00 0.00 0.00 2.57
760 770 2.359981 TCCCGATGGTCACTACTAGG 57.640 55.000 0.00 0.00 0.00 3.02
761 771 1.848388 TCCCGATGGTCACTACTAGGA 59.152 52.381 0.00 0.00 0.00 2.94
762 772 2.158652 TCCCGATGGTCACTACTAGGAG 60.159 54.545 0.00 0.00 0.00 3.69
763 773 2.423088 CCCGATGGTCACTACTAGGAGT 60.423 54.545 0.17 0.17 0.00 3.85
796 3320 6.018913 TGCGTTCGTCTTTGTTTTCAGTATAA 60.019 34.615 0.00 0.00 0.00 0.98
850 3375 2.556189 CGTGTGATTCCATGTTTTCCCA 59.444 45.455 0.00 0.00 0.00 4.37
867 3392 1.134788 CCCAGTTCGAAGGCGTATTCT 60.135 52.381 0.00 0.00 38.98 2.40
878 3403 1.488261 GCGTATTCTTCGGAAGGCGG 61.488 60.000 17.19 4.77 37.38 6.13
884 3409 1.081442 CTTCGGAAGGCGGTTTTGC 60.081 57.895 9.93 0.00 0.00 3.68
888 3413 2.258726 GGAAGGCGGTTTTGCGACT 61.259 57.895 0.00 0.00 35.06 4.18
934 3460 3.411446 TCTGATAAGCAACCACCACTTG 58.589 45.455 0.00 0.00 0.00 3.16
945 3471 3.359002 CCACTTGGCTTCAGTGGC 58.641 61.111 15.23 0.00 45.18 5.01
964 3490 4.903355 CTCTGCCGCTCTCGCTCG 62.903 72.222 0.00 0.00 0.00 5.03
973 3499 1.011451 GCTCTCGCTCGCTCTGTTTT 61.011 55.000 0.00 0.00 0.00 2.43
1021 3551 2.191400 TGGATTTGGTCTCTGGGAGAG 58.809 52.381 0.00 0.00 43.64 3.20
1022 3552 2.192263 GGATTTGGTCTCTGGGAGAGT 58.808 52.381 0.00 0.00 42.83 3.24
1023 3553 2.573915 GGATTTGGTCTCTGGGAGAGTT 59.426 50.000 0.00 0.00 42.83 3.01
1032 3562 2.104792 CTCTGGGAGAGTTGTGGTTCAA 59.895 50.000 0.00 0.00 37.57 2.69
1037 3567 2.495084 GAGAGTTGTGGTTCAAGGGTC 58.505 52.381 0.00 0.00 36.66 4.46
1080 3610 1.481871 AACCGCCGAGATTTCCTCTA 58.518 50.000 0.00 0.00 39.78 2.43
1255 3788 5.465532 TGATGTTCCTGATGAGATAGAGC 57.534 43.478 0.00 0.00 0.00 4.09
1278 3811 1.482593 GAGGTCGAGGATGTTGATGGT 59.517 52.381 0.00 0.00 0.00 3.55
1280 3813 1.656652 GTCGAGGATGTTGATGGTGG 58.343 55.000 0.00 0.00 0.00 4.61
1287 3820 0.625849 ATGTTGATGGTGGGGAGGAC 59.374 55.000 0.00 0.00 0.00 3.85
1306 3839 1.402896 CGAGGGCAGCAAGGAGGATA 61.403 60.000 0.00 0.00 0.00 2.59
1307 3840 1.063183 GAGGGCAGCAAGGAGGATAT 58.937 55.000 0.00 0.00 0.00 1.63
1312 3845 0.394192 CAGCAAGGAGGATATCGGCA 59.606 55.000 0.00 0.00 0.00 5.69
1323 3856 3.260884 AGGATATCGGCAATGACGGTAAT 59.739 43.478 5.26 0.00 31.71 1.89
1328 3861 1.063469 CGGCAATGACGGTAATGGTTC 59.937 52.381 0.00 0.00 0.00 3.62
1330 3863 2.097466 GGCAATGACGGTAATGGTTCTG 59.903 50.000 0.00 0.00 0.00 3.02
1331 3864 2.477863 GCAATGACGGTAATGGTTCTGC 60.478 50.000 0.00 0.00 0.00 4.26
1333 3866 0.604073 TGACGGTAATGGTTCTGCGA 59.396 50.000 0.00 0.00 0.00 5.10
1349 3882 4.574892 TCTGCGAATTCTGGTGATGTTTA 58.425 39.130 3.52 0.00 0.00 2.01
1358 3891 8.907222 AATTCTGGTGATGTTTAATTGCTTTT 57.093 26.923 0.00 0.00 0.00 2.27
1394 3934 0.601558 GGGTTCAGTCTACTGTCGCA 59.398 55.000 9.81 0.00 44.12 5.10
1407 3947 0.324614 TGTCGCATGTGGAAGGATGT 59.675 50.000 6.39 0.00 0.00 3.06
1408 3948 0.729116 GTCGCATGTGGAAGGATGTG 59.271 55.000 6.39 0.00 0.00 3.21
1444 3984 1.672881 CGCTCCATTTCTTCCATCACC 59.327 52.381 0.00 0.00 0.00 4.02
1445 3985 1.672881 GCTCCATTTCTTCCATCACCG 59.327 52.381 0.00 0.00 0.00 4.94
1446 3986 2.941415 GCTCCATTTCTTCCATCACCGT 60.941 50.000 0.00 0.00 0.00 4.83
1447 3987 2.939103 CTCCATTTCTTCCATCACCGTC 59.061 50.000 0.00 0.00 0.00 4.79
1448 3988 2.017049 CCATTTCTTCCATCACCGTCC 58.983 52.381 0.00 0.00 0.00 4.79
1492 4032 5.066593 GGGGATCCAAATGTTCATAGACTC 58.933 45.833 15.23 0.00 0.00 3.36
1535 4075 9.688592 AATGCGAGTTATAAGGTACTATAACAC 57.311 33.333 19.40 14.75 38.49 3.32
1541 4081 5.857471 ATAAGGTACTATAACACGCACCA 57.143 39.130 0.00 0.00 38.49 4.17
1565 4111 7.413438 CCATCAGAAAACTGCAGTAGATTGTAC 60.413 40.741 22.01 6.75 0.00 2.90
1569 4115 3.936372 ACTGCAGTAGATTGTACGTGT 57.064 42.857 20.16 0.00 0.00 4.49
1575 4121 2.232941 AGTAGATTGTACGTGTGTGGGG 59.767 50.000 0.00 0.00 0.00 4.96
1577 4123 1.302993 ATTGTACGTGTGTGGGGGC 60.303 57.895 0.00 0.00 0.00 5.80
1622 4168 6.421801 GCAATTTGCACTTGTCACTCTAATTT 59.578 34.615 16.35 0.00 44.26 1.82
1660 4206 6.814644 ACAATATTTGTGAACAGATGGCATTG 59.185 34.615 0.00 4.82 43.48 2.82
1732 4281 6.294176 GGTGCTTCAAATACACTTCATGAGTT 60.294 38.462 0.00 0.00 36.10 3.01
1804 4353 1.493022 CCCAATCCCTCGGTTGGATAA 59.507 52.381 3.67 0.00 46.15 1.75
1845 4394 6.701340 AGAAGATAATTTTTCAGTTTGGGCC 58.299 36.000 0.00 0.00 0.00 5.80
2003 4554 1.755384 CCCTTCCCTTATCTCGCCC 59.245 63.158 0.00 0.00 0.00 6.13
2029 4580 2.567169 CCCACAGTTGATGTCCTACTCA 59.433 50.000 0.00 0.00 41.41 3.41
2035 4586 6.977502 CACAGTTGATGTCCTACTCATCTAAG 59.022 42.308 7.30 0.76 41.41 2.18
2059 4610 3.257375 ACACGAGTGCAGTGATAAACCTA 59.743 43.478 11.19 0.00 41.83 3.08
2065 4616 4.041691 AGTGCAGTGATAAACCTAGGTTGT 59.958 41.667 27.75 18.92 38.47 3.32
2078 4629 0.673437 AGGTTGTGCAATTGTTCCCG 59.327 50.000 7.40 0.00 0.00 5.14
2101 4652 7.352739 CCGTTTATGTAAGTTGAATCTATGCC 58.647 38.462 0.00 0.00 0.00 4.40
2207 5546 9.787435 TTATCCACCGACTAAGCAAATAATATT 57.213 29.630 0.00 0.00 0.00 1.28
2243 5582 7.232534 GGTATCAATAAAGCAATTATGTCCCCA 59.767 37.037 0.00 0.00 34.41 4.96
2377 5716 9.797556 GTTTTTCCATTGAAACTACAACTTACT 57.202 29.630 0.00 0.00 40.12 2.24
2506 5845 0.404040 ATTGGCCGAGGAGGTTTCAA 59.596 50.000 0.00 0.00 43.70 2.69
2600 5939 6.598503 TCGAGAAGATGTCCACTAGGTATAA 58.401 40.000 0.00 0.00 35.89 0.98
2670 6009 7.592938 TGTTTATATGAGTTTGTTGAAGCCTG 58.407 34.615 0.00 0.00 0.00 4.85
2935 6275 8.807948 ATGGTACTTACATTTGAAAGCATAGT 57.192 30.769 0.00 0.00 0.00 2.12
3006 6347 9.965824 CTTTTTGTAGCCTTCTTCTATTTTTCA 57.034 29.630 0.00 0.00 0.00 2.69
3042 6384 8.149973 TGACTTCTCATTAAACACTTGTTACC 57.850 34.615 0.00 0.00 37.25 2.85
3090 6432 5.136816 ACATTGAAGCATACACAATTGCA 57.863 34.783 5.05 0.00 41.35 4.08
3234 6577 6.694411 GGCACAAACTGATAGCATCAATAAAG 59.306 38.462 0.00 0.00 39.11 1.85
3276 6619 5.615289 CTTAGCACTAAGGCATACTTCCAT 58.385 41.667 9.19 0.00 40.64 3.41
3277 6620 3.813443 AGCACTAAGGCATACTTCCATG 58.187 45.455 0.00 0.00 40.64 3.66
3305 6648 3.699134 GAAGGTGTCATCCCCCGGC 62.699 68.421 0.00 0.00 0.00 6.13
3422 6765 2.642254 CCAGGAAGGCGACGGTGTA 61.642 63.158 0.00 0.00 0.00 2.90
3615 6958 2.874701 TGTTGAGCAGCTTCTTTGACTC 59.125 45.455 0.00 0.00 0.00 3.36
3618 6961 2.874701 TGAGCAGCTTCTTTGACTCAAC 59.125 45.455 0.00 0.00 31.60 3.18
3634 6977 2.819608 CTCAACCATTGTTTCCATCCGT 59.180 45.455 0.00 0.00 30.42 4.69
3645 6988 4.542735 GTTTCCATCCGTGGTAACTTTTG 58.457 43.478 8.98 0.00 46.45 2.44
3651 6994 3.482436 TCCGTGGTAACTTTTGCAGAAT 58.518 40.909 0.00 0.00 37.61 2.40
3655 6998 4.452455 CGTGGTAACTTTTGCAGAATCTCT 59.548 41.667 0.00 0.00 37.61 3.10
3667 7010 3.855950 GCAGAATCTCTTCCAATTTTGCG 59.144 43.478 0.00 0.00 34.57 4.85
3792 7139 1.051812 CACCTGAACTGTCCCTGTCT 58.948 55.000 0.00 0.00 0.00 3.41
3800 7147 3.477210 ACTGTCCCTGTCTTGAAGTTC 57.523 47.619 0.00 0.00 0.00 3.01
3842 7240 6.491745 TCTTACATAGTTGTTTCATTTGGCCA 59.508 34.615 0.00 0.00 37.28 5.36
3863 7261 5.764686 GCCATGATATACAATCCACTTGTCA 59.235 40.000 0.00 0.00 44.99 3.58
3907 7305 4.421948 GAGAATGGATTACGTGTTCGACT 58.578 43.478 0.00 0.00 40.62 4.18
3916 7314 0.163788 CGTGTTCGACTGAATGTGCC 59.836 55.000 0.00 0.00 39.71 5.01
3917 7315 0.517316 GTGTTCGACTGAATGTGCCC 59.483 55.000 0.00 0.00 36.29 5.36
3919 7317 1.375396 TTCGACTGAATGTGCCCCG 60.375 57.895 0.00 0.00 0.00 5.73
3920 7318 3.499737 CGACTGAATGTGCCCCGC 61.500 66.667 0.00 0.00 0.00 6.13
3921 7319 2.359850 GACTGAATGTGCCCCGCA 60.360 61.111 0.00 0.00 35.60 5.69
3922 7320 1.971167 GACTGAATGTGCCCCGCAA 60.971 57.895 0.00 0.00 41.47 4.85
3923 7321 1.523154 GACTGAATGTGCCCCGCAAA 61.523 55.000 0.00 0.00 41.47 3.68
3924 7322 1.112315 ACTGAATGTGCCCCGCAAAA 61.112 50.000 0.00 0.00 41.47 2.44
3925 7323 0.033228 CTGAATGTGCCCCGCAAAAA 59.967 50.000 0.00 0.00 41.47 1.94
3972 7370 3.327757 AGGAAAGTTGATCCAGTACAGCA 59.672 43.478 0.00 0.00 39.55 4.41
4022 7421 6.335471 TGACTTTGTAAATACGACCAGAGA 57.665 37.500 0.00 0.00 0.00 3.10
4056 7455 3.565063 AGCGCATGCATGTCATACATAAA 59.435 39.130 26.79 0.00 46.23 1.40
4059 7501 3.910170 GCATGCATGTCATACATAAAGCG 59.090 43.478 26.79 0.00 36.53 4.68
4087 7529 4.278170 TGCTAGTTGGACATTTGGACAAAG 59.722 41.667 3.71 0.00 33.32 2.77
4088 7530 3.733443 AGTTGGACATTTGGACAAAGC 57.267 42.857 3.71 0.00 33.32 3.51
4098 7540 3.586470 TTGGACAAAGCCCAACTAAGA 57.414 42.857 0.00 0.00 38.64 2.10
4105 7547 4.762251 ACAAAGCCCAACTAAGATGAGAAC 59.238 41.667 0.00 0.00 0.00 3.01
4157 7770 7.918643 TGTAAAAGTAACTAAAAAGTGTCCCG 58.081 34.615 0.00 0.00 0.00 5.14
4158 7771 7.552330 TGTAAAAGTAACTAAAAAGTGTCCCGT 59.448 33.333 0.00 0.00 0.00 5.28
4159 7772 7.395190 AAAAGTAACTAAAAAGTGTCCCGTT 57.605 32.000 0.00 0.00 0.00 4.44
4160 7773 6.609237 AAGTAACTAAAAAGTGTCCCGTTC 57.391 37.500 0.00 0.00 0.00 3.95
4161 7774 5.059161 AGTAACTAAAAAGTGTCCCGTTCC 58.941 41.667 0.00 0.00 0.00 3.62
4162 7775 2.854963 ACTAAAAAGTGTCCCGTTCCC 58.145 47.619 0.00 0.00 0.00 3.97
4163 7776 2.156917 CTAAAAAGTGTCCCGTTCCCC 58.843 52.381 0.00 0.00 0.00 4.81
4164 7777 0.554305 AAAAAGTGTCCCGTTCCCCT 59.446 50.000 0.00 0.00 0.00 4.79
4165 7778 0.109913 AAAAGTGTCCCGTTCCCCTC 59.890 55.000 0.00 0.00 0.00 4.30
4166 7779 1.057851 AAAGTGTCCCGTTCCCCTCA 61.058 55.000 0.00 0.00 0.00 3.86
4167 7780 1.057851 AAGTGTCCCGTTCCCCTCAA 61.058 55.000 0.00 0.00 0.00 3.02
4168 7781 1.057851 AGTGTCCCGTTCCCCTCAAA 61.058 55.000 0.00 0.00 0.00 2.69
4169 7782 0.179012 GTGTCCCGTTCCCCTCAAAA 60.179 55.000 0.00 0.00 0.00 2.44
4170 7783 0.551879 TGTCCCGTTCCCCTCAAAAA 59.448 50.000 0.00 0.00 0.00 1.94
4196 7809 2.229784 AGTGTCCCGTCTTAACCGTTAG 59.770 50.000 0.00 0.00 0.00 2.34
4198 7811 3.091545 TGTCCCGTCTTAACCGTTAGAT 58.908 45.455 0.00 0.00 0.00 1.98
4199 7812 3.119388 TGTCCCGTCTTAACCGTTAGATG 60.119 47.826 0.00 0.00 0.00 2.90
4214 7827 6.021596 CCGTTAGATGTTTGCTATTTCACAC 58.978 40.000 0.00 0.00 0.00 3.82
4227 7840 3.607422 TTTCACACTTCAGATTGTGCG 57.393 42.857 7.54 0.00 42.46 5.34
4232 7845 2.802816 ACACTTCAGATTGTGCGACTTC 59.197 45.455 4.51 0.00 37.68 3.01
4237 7850 3.067106 TCAGATTGTGCGACTTCTTTCC 58.933 45.455 0.00 0.00 0.00 3.13
4238 7851 2.160417 CAGATTGTGCGACTTCTTTCCC 59.840 50.000 0.00 0.00 0.00 3.97
4335 7950 9.651913 CACCTTAAAACCTAAAATTGCACATAT 57.348 29.630 0.00 0.00 0.00 1.78
4344 7959 8.621286 ACCTAAAATTGCACATATTGTACTAGC 58.379 33.333 0.00 0.00 0.00 3.42
4345 7960 8.620416 CCTAAAATTGCACATATTGTACTAGCA 58.380 33.333 0.00 0.00 0.00 3.49
4348 7963 9.874205 AAAATTGCACATATTGTACTAGCAAAT 57.126 25.926 0.00 0.00 38.46 2.32
4381 7996 7.548196 ACTTAAGTGAAGAATCAACGTTGAA 57.452 32.000 32.69 17.45 38.46 2.69
4382 7997 7.630924 ACTTAAGTGAAGAATCAACGTTGAAG 58.369 34.615 32.69 21.98 38.46 3.02
4383 7998 5.424121 AAGTGAAGAATCAACGTTGAAGG 57.576 39.130 32.69 6.02 41.13 3.46
4384 7999 4.451900 AGTGAAGAATCAACGTTGAAGGT 58.548 39.130 32.69 21.12 41.13 3.50
4385 8000 4.511826 AGTGAAGAATCAACGTTGAAGGTC 59.488 41.667 32.69 26.74 41.13 3.85
4386 8001 3.493129 TGAAGAATCAACGTTGAAGGTCG 59.507 43.478 32.69 4.03 41.13 4.79
4387 8002 1.798813 AGAATCAACGTTGAAGGTCGC 59.201 47.619 32.69 17.90 41.13 5.19
4388 8003 0.872388 AATCAACGTTGAAGGTCGCC 59.128 50.000 32.69 0.00 41.13 5.54
4389 8004 1.289109 ATCAACGTTGAAGGTCGCCG 61.289 55.000 32.69 1.67 41.13 6.46
4390 8005 1.952133 CAACGTTGAAGGTCGCCGA 60.952 57.895 23.90 0.00 0.00 5.54
4391 8006 1.952635 AACGTTGAAGGTCGCCGAC 60.953 57.895 9.15 9.15 0.00 4.79
4392 8007 2.049433 CGTTGAAGGTCGCCGACT 60.049 61.111 17.76 0.00 32.47 4.18
4393 8008 1.210931 CGTTGAAGGTCGCCGACTA 59.789 57.895 17.76 0.00 32.47 2.59
4394 8009 0.387622 CGTTGAAGGTCGCCGACTAA 60.388 55.000 17.76 5.09 32.47 2.24
4395 8010 1.347320 GTTGAAGGTCGCCGACTAAG 58.653 55.000 17.76 0.00 32.47 2.18
4396 8011 1.068055 GTTGAAGGTCGCCGACTAAGA 60.068 52.381 17.76 0.00 32.47 2.10
4397 8012 1.471119 TGAAGGTCGCCGACTAAGAT 58.529 50.000 17.76 0.00 32.47 2.40
4398 8013 2.646930 TGAAGGTCGCCGACTAAGATA 58.353 47.619 17.76 0.00 32.47 1.98
4399 8014 3.220110 TGAAGGTCGCCGACTAAGATAT 58.780 45.455 17.76 0.00 32.47 1.63
4400 8015 4.392047 TGAAGGTCGCCGACTAAGATATA 58.608 43.478 17.76 0.00 32.47 0.86
4401 8016 4.823442 TGAAGGTCGCCGACTAAGATATAA 59.177 41.667 17.76 0.00 32.47 0.98
4402 8017 4.762956 AGGTCGCCGACTAAGATATAAC 57.237 45.455 17.76 0.00 32.47 1.89
4403 8018 3.188048 AGGTCGCCGACTAAGATATAACG 59.812 47.826 17.76 0.00 32.47 3.18
4404 8019 3.187227 GGTCGCCGACTAAGATATAACGA 59.813 47.826 17.76 0.00 32.47 3.85
4405 8020 4.319766 GGTCGCCGACTAAGATATAACGAA 60.320 45.833 17.76 0.00 32.47 3.85
4406 8021 5.207768 GTCGCCGACTAAGATATAACGAAA 58.792 41.667 10.56 0.00 0.00 3.46
4407 8022 5.855395 GTCGCCGACTAAGATATAACGAAAT 59.145 40.000 10.56 0.00 0.00 2.17
4408 8023 7.017645 GTCGCCGACTAAGATATAACGAAATA 58.982 38.462 10.56 0.00 0.00 1.40
4409 8024 7.215942 GTCGCCGACTAAGATATAACGAAATAG 59.784 40.741 10.56 0.00 0.00 1.73
4410 8025 7.118245 TCGCCGACTAAGATATAACGAAATAGA 59.882 37.037 0.00 0.00 0.00 1.98
4411 8026 7.215942 CGCCGACTAAGATATAACGAAATAGAC 59.784 40.741 0.00 0.00 0.00 2.59
4412 8027 7.215942 GCCGACTAAGATATAACGAAATAGACG 59.784 40.741 0.00 0.00 0.00 4.18
4413 8028 8.226448 CCGACTAAGATATAACGAAATAGACGT 58.774 37.037 0.00 0.00 45.89 4.34
4471 8086 3.068024 TCCAGACAAAACAACCTCATTGC 59.932 43.478 0.00 0.00 42.62 3.56
4485 8100 4.037684 ACCTCATTGCTACATAGTACGTCC 59.962 45.833 0.00 0.00 0.00 4.79
4492 8107 4.081862 TGCTACATAGTACGTCCAGCTTTT 60.082 41.667 0.00 0.00 0.00 2.27
4497 8112 7.535489 ACATAGTACGTCCAGCTTTTAATTC 57.465 36.000 0.00 0.00 0.00 2.17
4508 8123 6.714810 TCCAGCTTTTAATTCAGTTTCAGCTA 59.285 34.615 0.00 0.00 0.00 3.32
4509 8124 6.803807 CCAGCTTTTAATTCAGTTTCAGCTAC 59.196 38.462 0.00 0.00 0.00 3.58
4510 8125 7.308830 CCAGCTTTTAATTCAGTTTCAGCTACT 60.309 37.037 0.00 0.00 0.00 2.57
4511 8126 7.748241 CAGCTTTTAATTCAGTTTCAGCTACTC 59.252 37.037 0.00 0.00 0.00 2.59
4512 8127 7.024171 GCTTTTAATTCAGTTTCAGCTACTCC 58.976 38.462 0.00 0.00 0.00 3.85
4513 8128 7.448748 TTTTAATTCAGTTTCAGCTACTCCC 57.551 36.000 0.00 0.00 0.00 4.30
4514 8129 4.917906 AATTCAGTTTCAGCTACTCCCT 57.082 40.909 0.00 0.00 0.00 4.20
4515 8130 3.963428 TTCAGTTTCAGCTACTCCCTC 57.037 47.619 0.00 0.00 0.00 4.30
4516 8131 3.176924 TCAGTTTCAGCTACTCCCTCT 57.823 47.619 0.00 0.00 0.00 3.69
4517 8132 4.317530 TCAGTTTCAGCTACTCCCTCTA 57.682 45.455 0.00 0.00 0.00 2.43
4518 8133 4.873010 TCAGTTTCAGCTACTCCCTCTAT 58.127 43.478 0.00 0.00 0.00 1.98
4519 8134 5.273208 TCAGTTTCAGCTACTCCCTCTATT 58.727 41.667 0.00 0.00 0.00 1.73
4520 8135 5.361285 TCAGTTTCAGCTACTCCCTCTATTC 59.639 44.000 0.00 0.00 0.00 1.75
4521 8136 4.651962 AGTTTCAGCTACTCCCTCTATTCC 59.348 45.833 0.00 0.00 0.00 3.01
4522 8137 3.973472 TCAGCTACTCCCTCTATTCCA 57.027 47.619 0.00 0.00 0.00 3.53
4523 8138 4.477536 TCAGCTACTCCCTCTATTCCAT 57.522 45.455 0.00 0.00 0.00 3.41
4524 8139 5.600669 TCAGCTACTCCCTCTATTCCATA 57.399 43.478 0.00 0.00 0.00 2.74
4525 8140 6.159172 TCAGCTACTCCCTCTATTCCATAT 57.841 41.667 0.00 0.00 0.00 1.78
4526 8141 6.565974 TCAGCTACTCCCTCTATTCCATATT 58.434 40.000 0.00 0.00 0.00 1.28
4527 8142 7.709601 TCAGCTACTCCCTCTATTCCATATTA 58.290 38.462 0.00 0.00 0.00 0.98
4528 8143 8.177456 TCAGCTACTCCCTCTATTCCATATTAA 58.823 37.037 0.00 0.00 0.00 1.40
4529 8144 8.474025 CAGCTACTCCCTCTATTCCATATTAAG 58.526 40.741 0.00 0.00 0.00 1.85
4530 8145 8.180844 AGCTACTCCCTCTATTCCATATTAAGT 58.819 37.037 0.00 0.00 0.00 2.24
4531 8146 8.254508 GCTACTCCCTCTATTCCATATTAAGTG 58.745 40.741 0.00 0.00 0.00 3.16
4532 8147 9.315363 CTACTCCCTCTATTCCATATTAAGTGT 57.685 37.037 0.00 0.00 0.00 3.55
4533 8148 8.196378 ACTCCCTCTATTCCATATTAAGTGTC 57.804 38.462 0.00 0.00 0.00 3.67
4534 8149 7.039644 ACTCCCTCTATTCCATATTAAGTGTCG 60.040 40.741 0.00 0.00 0.00 4.35
4535 8150 5.869888 CCCTCTATTCCATATTAAGTGTCGC 59.130 44.000 0.00 0.00 0.00 5.19
4536 8151 6.295349 CCCTCTATTCCATATTAAGTGTCGCT 60.295 42.308 0.00 0.00 0.00 4.93
4537 8152 6.587990 CCTCTATTCCATATTAAGTGTCGCTG 59.412 42.308 0.00 0.00 0.00 5.18
4538 8153 7.284919 TCTATTCCATATTAAGTGTCGCTGA 57.715 36.000 0.00 0.00 0.00 4.26
4539 8154 7.722363 TCTATTCCATATTAAGTGTCGCTGAA 58.278 34.615 0.00 0.00 0.00 3.02
4540 8155 8.367911 TCTATTCCATATTAAGTGTCGCTGAAT 58.632 33.333 1.55 1.55 33.00 2.57
4541 8156 7.807977 ATTCCATATTAAGTGTCGCTGAATT 57.192 32.000 1.17 0.00 30.92 2.17
4542 8157 8.902540 ATTCCATATTAAGTGTCGCTGAATTA 57.097 30.769 1.17 0.00 30.92 1.40
4543 8158 7.946655 TCCATATTAAGTGTCGCTGAATTAG 57.053 36.000 1.17 0.00 30.92 1.73
4544 8159 7.497595 TCCATATTAAGTGTCGCTGAATTAGT 58.502 34.615 1.17 0.00 30.92 2.24
4545 8160 8.635328 TCCATATTAAGTGTCGCTGAATTAGTA 58.365 33.333 1.17 0.00 30.92 1.82
4546 8161 8.700644 CCATATTAAGTGTCGCTGAATTAGTAC 58.299 37.037 1.17 0.00 30.92 2.73
4547 8162 9.244799 CATATTAAGTGTCGCTGAATTAGTACA 57.755 33.333 1.17 0.00 30.92 2.90
4548 8163 9.811995 ATATTAAGTGTCGCTGAATTAGTACAA 57.188 29.630 1.17 0.00 30.92 2.41
4549 8164 7.949903 TTAAGTGTCGCTGAATTAGTACAAA 57.050 32.000 0.00 0.00 0.00 2.83
4550 8165 6.467723 AAGTGTCGCTGAATTAGTACAAAG 57.532 37.500 0.00 0.00 0.00 2.77
4551 8166 5.539048 AGTGTCGCTGAATTAGTACAAAGT 58.461 37.500 0.00 0.00 0.00 2.66
4552 8167 5.989777 AGTGTCGCTGAATTAGTACAAAGTT 59.010 36.000 0.00 0.00 0.00 2.66
4553 8168 6.482308 AGTGTCGCTGAATTAGTACAAAGTTT 59.518 34.615 0.00 0.00 0.00 2.66
4554 8169 6.573725 GTGTCGCTGAATTAGTACAAAGTTTG 59.426 38.462 14.13 14.13 0.00 2.93
4555 8170 5.564127 GTCGCTGAATTAGTACAAAGTTTGC 59.436 40.000 15.59 0.34 0.00 3.68
4556 8171 5.237561 TCGCTGAATTAGTACAAAGTTTGCA 59.762 36.000 15.59 0.00 0.00 4.08
4557 8172 5.565259 CGCTGAATTAGTACAAAGTTTGCAG 59.435 40.000 15.59 12.13 0.00 4.41
4558 8173 5.858581 GCTGAATTAGTACAAAGTTTGCAGG 59.141 40.000 15.59 0.00 0.00 4.85
4559 8174 6.293955 GCTGAATTAGTACAAAGTTTGCAGGA 60.294 38.462 15.59 0.00 0.00 3.86
4560 8175 7.202016 TGAATTAGTACAAAGTTTGCAGGAG 57.798 36.000 15.59 0.00 0.00 3.69
4561 8176 6.206634 TGAATTAGTACAAAGTTTGCAGGAGG 59.793 38.462 15.59 0.00 0.00 4.30
4562 8177 2.863809 AGTACAAAGTTTGCAGGAGGG 58.136 47.619 15.59 0.00 0.00 4.30
4563 8178 2.441750 AGTACAAAGTTTGCAGGAGGGA 59.558 45.455 15.59 0.00 0.00 4.20
4564 8179 1.986882 ACAAAGTTTGCAGGAGGGAG 58.013 50.000 15.59 0.00 0.00 4.30
4565 8180 1.215423 ACAAAGTTTGCAGGAGGGAGT 59.785 47.619 15.59 0.00 0.00 3.85
4566 8181 2.441750 ACAAAGTTTGCAGGAGGGAGTA 59.558 45.455 15.59 0.00 0.00 2.59
4570 8185 2.832733 AGTTTGCAGGAGGGAGTAGTAC 59.167 50.000 0.00 0.00 0.00 2.73
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
3 4 1.003839 GACGGTGGCTGTCATTGGA 60.004 57.895 3.47 0.00 39.36 3.53
138 139 7.934120 GTCTCTGCAGGTATATACAAGGAAAAT 59.066 37.037 15.13 0.00 0.00 1.82
222 223 3.188786 GCGTGCGGCTTCTCGAAT 61.189 61.111 0.00 0.00 39.11 3.34
245 246 2.738521 CCACCGTCTGCAAGTCCG 60.739 66.667 0.00 0.00 33.76 4.79
264 265 4.162690 GCGAGGGTCCATTCGGCT 62.163 66.667 14.57 0.00 37.30 5.52
269 270 2.536997 CTTTCCGGCGAGGGTCCATT 62.537 60.000 9.30 0.00 41.52 3.16
271 272 3.702048 CTTTCCGGCGAGGGTCCA 61.702 66.667 9.30 0.00 41.52 4.02
293 294 2.104170 CCTCCTTCTACTCCACAGTCC 58.896 57.143 0.00 0.00 33.62 3.85
314 315 3.966543 CCGCAGACCCCAAACCCT 61.967 66.667 0.00 0.00 0.00 4.34
343 344 1.635487 CTTCCTCAATTCCCTCACCCA 59.365 52.381 0.00 0.00 0.00 4.51
354 355 0.909610 TCACCTCCCGCTTCCTCAAT 60.910 55.000 0.00 0.00 0.00 2.57
375 376 2.696125 GCCTTCCCCTCCCATCCA 60.696 66.667 0.00 0.00 0.00 3.41
420 421 1.693627 CCTCGCTCCAGTACCAGTAT 58.306 55.000 0.00 0.00 0.00 2.12
427 428 2.829003 CTCCGCCTCGCTCCAGTA 60.829 66.667 0.00 0.00 0.00 2.74
749 759 6.073657 CGCAATCTAGTACTCCTAGTAGTGAC 60.074 46.154 0.00 0.00 43.23 3.67
750 760 5.990386 CGCAATCTAGTACTCCTAGTAGTGA 59.010 44.000 0.00 2.16 43.23 3.41
752 762 5.927819 ACGCAATCTAGTACTCCTAGTAGT 58.072 41.667 0.00 0.00 43.23 2.73
753 763 6.346758 CGAACGCAATCTAGTACTCCTAGTAG 60.347 46.154 0.00 0.00 43.23 2.57
754 764 5.464722 CGAACGCAATCTAGTACTCCTAGTA 59.535 44.000 0.00 0.00 43.23 1.82
755 765 4.272991 CGAACGCAATCTAGTACTCCTAGT 59.727 45.833 0.00 0.00 43.23 2.57
757 767 4.194640 ACGAACGCAATCTAGTACTCCTA 58.805 43.478 0.00 0.00 0.00 2.94
758 768 3.015327 ACGAACGCAATCTAGTACTCCT 58.985 45.455 0.00 0.00 0.00 3.69
759 769 3.065095 AGACGAACGCAATCTAGTACTCC 59.935 47.826 0.00 0.00 0.00 3.85
760 770 4.275838 AGACGAACGCAATCTAGTACTC 57.724 45.455 0.00 0.00 0.00 2.59
761 771 4.698583 AAGACGAACGCAATCTAGTACT 57.301 40.909 0.00 0.00 0.00 2.73
762 772 4.620184 ACAAAGACGAACGCAATCTAGTAC 59.380 41.667 0.00 0.00 0.00 2.73
763 773 4.801891 ACAAAGACGAACGCAATCTAGTA 58.198 39.130 0.00 0.00 0.00 1.82
796 3320 5.605488 TCCTTAGAAAACACAACCTAGGAGT 59.395 40.000 17.98 10.89 0.00 3.85
867 3392 2.899044 CGCAAAACCGCCTTCCGAA 61.899 57.895 0.00 0.00 40.02 4.30
878 3403 0.584876 AAGGTACGCAGTCGCAAAAC 59.415 50.000 0.00 0.00 43.93 2.43
884 3409 2.068837 TGGTTAAAGGTACGCAGTCG 57.931 50.000 0.00 0.00 43.93 4.18
888 3413 1.069823 TCGGTTGGTTAAAGGTACGCA 59.930 47.619 0.00 0.00 0.00 5.24
934 3460 3.123620 CAGAGCGCCACTGAAGCC 61.124 66.667 22.22 0.00 37.54 4.35
964 3490 3.058224 ACGCACAAGGATTAAAACAGAGC 60.058 43.478 0.00 0.00 0.00 4.09
973 3499 0.676466 CCCAGCACGCACAAGGATTA 60.676 55.000 0.00 0.00 0.00 1.75
1021 3551 1.605753 GAGGACCCTTGAACCACAAC 58.394 55.000 0.00 0.00 34.56 3.32
1022 3552 0.107831 CGAGGACCCTTGAACCACAA 59.892 55.000 0.00 0.00 36.97 3.33
1023 3553 1.752198 CGAGGACCCTTGAACCACA 59.248 57.895 0.00 0.00 0.00 4.17
1032 3562 2.685380 CAGGAAGGCGAGGACCCT 60.685 66.667 0.00 0.00 0.00 4.34
1037 3567 3.215245 CTCTCCAGGAAGGCGAGG 58.785 66.667 0.00 0.00 44.01 4.63
1080 3610 1.531602 GGCCCAAGAACCAAGCAGT 60.532 57.895 0.00 0.00 0.00 4.40
1108 3641 4.179579 GCATCCAGGAAACGCGCC 62.180 66.667 5.73 0.00 0.00 6.53
1170 3703 4.085009 CCTTCCTCTTCTTCTTGGCAAAT 58.915 43.478 0.00 0.00 0.00 2.32
1255 3788 0.526211 TCAACATCCTCGACCTCACG 59.474 55.000 0.00 0.00 0.00 4.35
1287 3820 1.402896 TATCCTCCTTGCTGCCCTCG 61.403 60.000 0.00 0.00 0.00 4.63
1294 3827 1.131638 TTGCCGATATCCTCCTTGCT 58.868 50.000 0.00 0.00 0.00 3.91
1297 3830 2.289072 CGTCATTGCCGATATCCTCCTT 60.289 50.000 0.00 0.00 0.00 3.36
1306 3839 1.134220 ACCATTACCGTCATTGCCGAT 60.134 47.619 0.00 0.00 0.00 4.18
1307 3840 0.250793 ACCATTACCGTCATTGCCGA 59.749 50.000 0.00 0.00 0.00 5.54
1312 3845 2.006888 CGCAGAACCATTACCGTCATT 58.993 47.619 0.00 0.00 0.00 2.57
1323 3856 1.071542 TCACCAGAATTCGCAGAACCA 59.928 47.619 0.00 0.00 45.90 3.67
1328 3861 3.837213 AAACATCACCAGAATTCGCAG 57.163 42.857 0.00 0.00 0.00 5.18
1330 3863 5.004726 GCAATTAAACATCACCAGAATTCGC 59.995 40.000 0.00 0.00 0.00 4.70
1331 3864 6.324819 AGCAATTAAACATCACCAGAATTCG 58.675 36.000 0.00 0.00 0.00 3.34
1333 3866 8.907222 AAAAGCAATTAAACATCACCAGAATT 57.093 26.923 0.00 0.00 0.00 2.17
1358 3891 4.161189 TGAACCCAAAGCTCACAATGAAAA 59.839 37.500 0.00 0.00 0.00 2.29
1362 3895 2.624838 ACTGAACCCAAAGCTCACAATG 59.375 45.455 0.00 0.00 0.00 2.82
1363 3896 2.887152 GACTGAACCCAAAGCTCACAAT 59.113 45.455 0.00 0.00 0.00 2.71
1394 3934 3.270433 AGAATTCCCACATCCTTCCACAT 59.730 43.478 0.65 0.00 0.00 3.21
1407 3947 2.164219 GAGCGAAAATGCAGAATTCCCA 59.836 45.455 0.65 0.02 37.31 4.37
1408 3948 2.480244 GGAGCGAAAATGCAGAATTCCC 60.480 50.000 0.65 0.00 37.31 3.97
1445 3985 3.680642 TGCTTCATAGTACGTACGGAC 57.319 47.619 23.27 23.27 0.00 4.79
1446 3986 4.906065 AATGCTTCATAGTACGTACGGA 57.094 40.909 21.06 8.59 0.00 4.69
1447 3987 4.208460 CCAAATGCTTCATAGTACGTACGG 59.792 45.833 21.06 13.26 0.00 4.02
1448 3988 4.208460 CCCAAATGCTTCATAGTACGTACG 59.792 45.833 19.49 15.01 0.00 3.67
1481 4021 4.096682 AGACGCTACAAGGAGTCTATGAAC 59.903 45.833 0.00 0.00 42.73 3.18
1488 4028 3.037485 GCAGACGCTACAAGGAGTC 57.963 57.895 0.00 0.00 36.52 3.36
1622 4168 5.184864 CACAAATATTGTTCCACTTGGCCTA 59.815 40.000 3.32 0.00 43.23 3.93
1732 4281 3.251487 CACATCAAACATCACTGCACTGA 59.749 43.478 0.00 0.00 0.00 3.41
1829 4378 3.554129 GCTTACGGCCCAAACTGAAAAAT 60.554 43.478 0.00 0.00 34.27 1.82
2003 4554 2.958355 AGGACATCAACTGTGGGTTTTG 59.042 45.455 0.00 0.00 38.54 2.44
2029 4580 3.255888 TCACTGCACTCGTGTTCTTAGAT 59.744 43.478 4.68 0.00 34.14 1.98
2035 4586 3.120649 GGTTTATCACTGCACTCGTGTTC 60.121 47.826 4.68 0.00 34.14 3.18
2059 4610 0.673437 CGGGAACAATTGCACAACCT 59.327 50.000 5.05 0.00 0.00 3.50
2065 4616 5.241949 ACTTACATAAACGGGAACAATTGCA 59.758 36.000 5.05 0.00 0.00 4.08
2078 4629 7.225931 TCCGGCATAGATTCAACTTACATAAAC 59.774 37.037 0.00 0.00 0.00 2.01
2243 5582 6.543831 GTCATCCACTATATCTGCAAGGTTTT 59.456 38.462 0.00 0.00 0.00 2.43
2351 5690 9.797556 AGTAAGTTGTAGTTTCAATGGAAAAAC 57.202 29.630 0.00 0.00 44.18 2.43
2377 5716 2.306219 TCCGTGGTCAATGGTTAATGGA 59.694 45.455 0.00 0.00 36.21 3.41
2526 5865 7.641760 CAGTTGCCTTGAAAGCATAAATTTTT 58.358 30.769 0.00 0.00 40.59 1.94
2555 5894 5.288712 TCGATGCGAACTCTGATTTCTAAAC 59.711 40.000 6.25 0.00 31.06 2.01
2600 5939 9.170734 CAGCATATGCCTGTACTAATATTGATT 57.829 33.333 23.96 0.00 43.38 2.57
2652 5991 3.152341 CTCCAGGCTTCAACAAACTCAT 58.848 45.455 0.00 0.00 0.00 2.90
2670 6009 4.646572 GATCCACTAATCCCAATCACTCC 58.353 47.826 0.00 0.00 0.00 3.85
2711 6050 4.498513 CCTTGAAACAGACGGTTAAAACCC 60.499 45.833 6.30 0.00 46.53 4.11
3042 6384 5.989477 TCAATAGTTGGAGAACCATACCTG 58.011 41.667 0.00 0.00 46.34 4.00
3090 6432 3.066291 TCATCCAACTTTGCACGGTAT 57.934 42.857 0.00 0.00 0.00 2.73
3188 6531 5.903010 TGCCAGAGTATCCAGATAAGGTTTA 59.097 40.000 0.00 0.00 33.66 2.01
3191 6534 3.643792 GTGCCAGAGTATCCAGATAAGGT 59.356 47.826 0.00 0.00 33.66 3.50
3234 6577 7.854916 GTGCTAAGCATCACATAGAGATTTTTC 59.145 37.037 0.00 0.00 41.91 2.29
3276 6619 4.761739 GGATGACACCTTCAAAGTGATTCA 59.238 41.667 0.00 0.00 37.92 2.57
3277 6620 4.156739 GGGATGACACCTTCAAAGTGATTC 59.843 45.833 0.00 0.00 37.92 2.52
3305 6648 0.099613 CACGGATGACTCTCTCCACG 59.900 60.000 0.00 0.00 0.00 4.94
3422 6765 3.738281 CGTCGTAGGAAATGAGCCTGAAT 60.738 47.826 0.00 0.00 36.96 2.57
3519 6862 3.758755 TTCTCTCTGCTTCTTGCTCAA 57.241 42.857 0.00 0.00 43.37 3.02
3634 6977 5.473504 GGAAGAGATTCTGCAAAAGTTACCA 59.526 40.000 0.00 0.00 0.00 3.25
3645 6988 3.855950 CGCAAAATTGGAAGAGATTCTGC 59.144 43.478 0.00 0.00 0.00 4.26
3651 6994 3.486383 AGTTCCGCAAAATTGGAAGAGA 58.514 40.909 0.00 0.00 44.55 3.10
3655 6998 3.004944 GTGGTAGTTCCGCAAAATTGGAA 59.995 43.478 0.00 0.00 45.32 3.53
3667 7010 4.024670 ACTGGACTATCAGTGGTAGTTCC 58.975 47.826 17.69 17.94 45.27 3.62
3792 7139 3.297134 AACAAGAGGGCAGAACTTCAA 57.703 42.857 0.00 0.00 0.00 2.69
3800 7147 0.251077 AGAGGCAAACAAGAGGGCAG 60.251 55.000 0.00 0.00 0.00 4.85
3863 7261 9.706691 TTCTCGTTGACAAGAGATTACTAATTT 57.293 29.630 14.25 0.00 42.34 1.82
3907 7305 2.127839 TTTTTGCGGGGCACATTCA 58.872 47.368 0.00 0.00 38.71 2.57
3934 7332 2.543777 TCCTACTCGCAGCACTTTTT 57.456 45.000 0.00 0.00 0.00 1.94
3935 7333 2.543777 TTCCTACTCGCAGCACTTTT 57.456 45.000 0.00 0.00 0.00 2.27
3936 7334 2.224305 ACTTTCCTACTCGCAGCACTTT 60.224 45.455 0.00 0.00 0.00 2.66
3937 7335 1.344763 ACTTTCCTACTCGCAGCACTT 59.655 47.619 0.00 0.00 0.00 3.16
3938 7336 0.969894 ACTTTCCTACTCGCAGCACT 59.030 50.000 0.00 0.00 0.00 4.40
3939 7337 1.461127 CAACTTTCCTACTCGCAGCAC 59.539 52.381 0.00 0.00 0.00 4.40
3940 7338 1.343142 TCAACTTTCCTACTCGCAGCA 59.657 47.619 0.00 0.00 0.00 4.41
3941 7339 2.080286 TCAACTTTCCTACTCGCAGC 57.920 50.000 0.00 0.00 0.00 5.25
3942 7340 3.190874 GGATCAACTTTCCTACTCGCAG 58.809 50.000 0.00 0.00 0.00 5.18
3943 7341 2.565391 TGGATCAACTTTCCTACTCGCA 59.435 45.455 0.00 0.00 34.17 5.10
3944 7342 3.190874 CTGGATCAACTTTCCTACTCGC 58.809 50.000 0.00 0.00 34.17 5.03
3995 7393 6.592607 TCTGGTCGTATTTACAAAGTCAATCC 59.407 38.462 0.00 0.00 0.00 3.01
3997 7395 7.383687 TCTCTGGTCGTATTTACAAAGTCAAT 58.616 34.615 0.00 0.00 0.00 2.57
3998 7396 6.751157 TCTCTGGTCGTATTTACAAAGTCAA 58.249 36.000 0.00 0.00 0.00 3.18
4011 7410 5.400066 TGATCAACATTTCTCTGGTCGTA 57.600 39.130 0.00 0.00 0.00 3.43
4013 7412 4.436584 GCTTGATCAACATTTCTCTGGTCG 60.437 45.833 3.38 0.00 0.00 4.79
4022 7421 2.264813 GCATGCGCTTGATCAACATTT 58.735 42.857 25.77 0.00 34.30 2.32
4056 7455 2.738521 CCAACTAGCACGCACGCT 60.739 61.111 2.07 2.07 46.26 5.07
4059 7501 1.156736 AATGTCCAACTAGCACGCAC 58.843 50.000 0.00 0.00 0.00 5.34
4087 7529 4.579869 TCAAGTTCTCATCTTAGTTGGGC 58.420 43.478 0.00 0.00 0.00 5.36
4088 7530 6.042638 TCTCAAGTTCTCATCTTAGTTGGG 57.957 41.667 0.00 0.00 0.00 4.12
4140 7753 4.388485 GGGAACGGGACACTTTTTAGTTA 58.612 43.478 0.00 0.00 0.00 2.24
4150 7763 0.179012 TTTTGAGGGGAACGGGACAC 60.179 55.000 0.00 0.00 0.00 3.67
4171 7784 2.874086 CGGTTAAGACGGGACACTTTTT 59.126 45.455 0.00 0.00 0.00 1.94
4172 7785 2.158914 ACGGTTAAGACGGGACACTTTT 60.159 45.455 4.73 0.00 35.23 2.27
4173 7786 1.413812 ACGGTTAAGACGGGACACTTT 59.586 47.619 4.73 0.00 35.23 2.66
4174 7787 1.043022 ACGGTTAAGACGGGACACTT 58.957 50.000 4.73 0.00 35.23 3.16
4175 7788 1.043022 AACGGTTAAGACGGGACACT 58.957 50.000 0.00 0.00 35.23 3.55
4176 7789 2.228822 TCTAACGGTTAAGACGGGACAC 59.771 50.000 1.79 0.00 35.23 3.67
4177 7790 2.513753 TCTAACGGTTAAGACGGGACA 58.486 47.619 1.79 0.00 35.23 4.02
4178 7791 3.119352 ACATCTAACGGTTAAGACGGGAC 60.119 47.826 1.79 0.00 35.23 4.46
4179 7792 3.091545 ACATCTAACGGTTAAGACGGGA 58.908 45.455 1.79 0.00 35.23 5.14
4180 7793 3.515330 ACATCTAACGGTTAAGACGGG 57.485 47.619 1.79 0.00 35.23 5.28
4181 7794 4.435121 GCAAACATCTAACGGTTAAGACGG 60.435 45.833 1.79 2.18 35.23 4.79
4182 7795 4.387862 AGCAAACATCTAACGGTTAAGACG 59.612 41.667 1.79 0.00 37.36 4.18
4183 7796 5.857822 AGCAAACATCTAACGGTTAAGAC 57.142 39.130 1.79 0.00 0.00 3.01
4191 7804 6.831769 AGTGTGAAATAGCAAACATCTAACG 58.168 36.000 0.00 0.00 0.00 3.18
4196 7809 6.902341 TCTGAAGTGTGAAATAGCAAACATC 58.098 36.000 0.00 0.00 0.00 3.06
4198 7811 6.882610 ATCTGAAGTGTGAAATAGCAAACA 57.117 33.333 0.00 0.00 0.00 2.83
4199 7812 7.141363 ACAATCTGAAGTGTGAAATAGCAAAC 58.859 34.615 0.00 0.00 31.30 2.93
4214 7827 4.377841 GGAAAGAAGTCGCACAATCTGAAG 60.378 45.833 0.00 0.00 0.00 3.02
4255 7869 5.021033 TGTTGACCTGAAATTGCACAATT 57.979 34.783 2.77 2.77 42.35 2.32
4288 7902 4.122017 TGTGCAACTTGGCATATACTGCA 61.122 43.478 0.00 6.26 46.06 4.41
4289 7903 2.423185 TGTGCAACTTGGCATATACTGC 59.577 45.455 0.00 0.00 46.92 4.40
4290 7904 3.181497 GGTGTGCAACTTGGCATATACTG 60.181 47.826 0.00 0.00 46.92 2.74
4291 7905 3.016736 GGTGTGCAACTTGGCATATACT 58.983 45.455 0.00 0.00 46.92 2.12
4292 7906 3.016736 AGGTGTGCAACTTGGCATATAC 58.983 45.455 0.00 0.00 46.92 1.47
4340 7955 6.968904 CACTTAAGTGGTTGCATATTTGCTAG 59.031 38.462 25.19 0.00 44.41 3.42
4341 7956 6.657117 TCACTTAAGTGGTTGCATATTTGCTA 59.343 34.615 30.35 7.02 46.18 3.49
4343 7958 5.708948 TCACTTAAGTGGTTGCATATTTGC 58.291 37.500 30.35 0.61 46.19 3.68
4344 7959 7.592938 TCTTCACTTAAGTGGTTGCATATTTG 58.407 34.615 30.35 5.31 45.65 2.32
4345 7960 7.759489 TCTTCACTTAAGTGGTTGCATATTT 57.241 32.000 30.35 0.00 45.65 1.40
4346 7961 7.759489 TTCTTCACTTAAGTGGTTGCATATT 57.241 32.000 30.35 0.00 45.65 1.28
4347 7962 7.611467 TGATTCTTCACTTAAGTGGTTGCATAT 59.389 33.333 30.35 16.57 45.65 1.78
4348 7963 6.939730 TGATTCTTCACTTAAGTGGTTGCATA 59.060 34.615 30.35 10.75 45.65 3.14
4349 7964 5.769662 TGATTCTTCACTTAAGTGGTTGCAT 59.230 36.000 30.35 17.78 45.65 3.96
4350 7965 5.129634 TGATTCTTCACTTAAGTGGTTGCA 58.870 37.500 30.35 19.23 45.65 4.08
4351 7966 5.689383 TGATTCTTCACTTAAGTGGTTGC 57.311 39.130 30.35 17.33 45.65 4.17
4352 7967 6.136071 CGTTGATTCTTCACTTAAGTGGTTG 58.864 40.000 30.35 20.95 45.65 3.77
4353 7968 5.820947 ACGTTGATTCTTCACTTAAGTGGTT 59.179 36.000 30.35 13.98 45.65 3.67
4354 7969 5.365619 ACGTTGATTCTTCACTTAAGTGGT 58.634 37.500 30.35 15.92 45.65 4.16
4355 7970 5.924475 ACGTTGATTCTTCACTTAAGTGG 57.076 39.130 30.35 18.09 45.65 4.00
4356 7971 6.943981 TCAACGTTGATTCTTCACTTAAGTG 58.056 36.000 26.53 26.60 38.63 3.16
4357 7972 7.254795 CCTTCAACGTTGATTCTTCACTTAAGT 60.255 37.037 30.10 1.12 37.00 2.24
4358 7973 7.072030 CCTTCAACGTTGATTCTTCACTTAAG 58.928 38.462 30.10 18.79 37.00 1.85
4359 7974 6.540914 ACCTTCAACGTTGATTCTTCACTTAA 59.459 34.615 30.10 10.82 37.00 1.85
4360 7975 6.053005 ACCTTCAACGTTGATTCTTCACTTA 58.947 36.000 30.10 11.33 37.00 2.24
4361 7976 4.881850 ACCTTCAACGTTGATTCTTCACTT 59.118 37.500 30.10 6.16 37.00 3.16
4362 7977 4.451900 ACCTTCAACGTTGATTCTTCACT 58.548 39.130 30.10 5.96 37.00 3.41
4363 7978 4.608445 CGACCTTCAACGTTGATTCTTCAC 60.608 45.833 30.10 16.31 37.00 3.18
4364 7979 3.493129 CGACCTTCAACGTTGATTCTTCA 59.507 43.478 30.10 14.17 37.00 3.02
4365 7980 3.664537 GCGACCTTCAACGTTGATTCTTC 60.665 47.826 30.10 21.02 37.00 2.87
4366 7981 2.223377 GCGACCTTCAACGTTGATTCTT 59.777 45.455 30.10 15.48 37.00 2.52
4367 7982 1.798813 GCGACCTTCAACGTTGATTCT 59.201 47.619 30.10 15.53 37.00 2.40
4368 7983 1.136057 GGCGACCTTCAACGTTGATTC 60.136 52.381 30.10 23.16 37.00 2.52
4369 7984 0.872388 GGCGACCTTCAACGTTGATT 59.128 50.000 30.10 17.89 37.00 2.57
4370 7985 1.289109 CGGCGACCTTCAACGTTGAT 61.289 55.000 30.10 16.81 37.00 2.57
4371 7986 1.952133 CGGCGACCTTCAACGTTGA 60.952 57.895 26.53 26.53 34.92 3.18
4372 7987 1.952133 TCGGCGACCTTCAACGTTG 60.952 57.895 22.35 22.35 0.00 4.10
4373 7988 1.952635 GTCGGCGACCTTCAACGTT 60.953 57.895 28.72 0.00 0.00 3.99
4374 7989 1.518056 TAGTCGGCGACCTTCAACGT 61.518 55.000 34.04 16.92 32.18 3.99
4375 7990 0.387622 TTAGTCGGCGACCTTCAACG 60.388 55.000 34.04 0.00 32.18 4.10
4376 7991 1.068055 TCTTAGTCGGCGACCTTCAAC 60.068 52.381 34.04 10.54 32.18 3.18
4377 7992 1.250328 TCTTAGTCGGCGACCTTCAA 58.750 50.000 34.04 21.34 32.18 2.69
4378 7993 1.471119 ATCTTAGTCGGCGACCTTCA 58.529 50.000 34.04 17.82 32.18 3.02
4379 7994 3.919223 ATATCTTAGTCGGCGACCTTC 57.081 47.619 34.04 11.90 32.18 3.46
4380 7995 4.320057 CGTTATATCTTAGTCGGCGACCTT 60.320 45.833 34.04 20.58 32.18 3.50
4381 7996 3.188048 CGTTATATCTTAGTCGGCGACCT 59.812 47.826 34.04 23.25 32.18 3.85
4382 7997 3.187227 TCGTTATATCTTAGTCGGCGACC 59.813 47.826 34.04 17.68 32.18 4.79
4383 7998 4.395581 TCGTTATATCTTAGTCGGCGAC 57.604 45.455 31.33 31.33 0.00 5.19
4384 7999 5.422666 TTTCGTTATATCTTAGTCGGCGA 57.577 39.130 4.99 4.99 0.00 5.54
4385 8000 7.215942 GTCTATTTCGTTATATCTTAGTCGGCG 59.784 40.741 0.00 0.00 0.00 6.46
4386 8001 7.215942 CGTCTATTTCGTTATATCTTAGTCGGC 59.784 40.741 0.00 0.00 0.00 5.54
4387 8002 8.226448 ACGTCTATTTCGTTATATCTTAGTCGG 58.774 37.037 0.00 0.00 38.38 4.79
4401 8016 9.630098 TTAACAATTAGAGAACGTCTATTTCGT 57.370 29.630 0.00 0.00 43.45 3.85
4402 8017 9.882856 GTTAACAATTAGAGAACGTCTATTTCG 57.117 33.333 0.00 0.00 37.62 3.46
4405 8020 9.701098 TGTGTTAACAATTAGAGAACGTCTATT 57.299 29.630 10.51 0.00 33.67 1.73
4406 8021 9.701098 TTGTGTTAACAATTAGAGAACGTCTAT 57.299 29.630 10.51 0.00 41.41 1.98
4407 8022 9.531942 TTTGTGTTAACAATTAGAGAACGTCTA 57.468 29.630 10.51 0.00 45.54 2.59
4408 8023 8.428186 TTTGTGTTAACAATTAGAGAACGTCT 57.572 30.769 10.51 0.00 45.54 4.18
4409 8024 9.659830 ATTTTGTGTTAACAATTAGAGAACGTC 57.340 29.630 10.51 0.00 45.54 4.34
4419 8034 9.206870 CCAGCTGAATATTTTGTGTTAACAATT 57.793 29.630 17.39 5.26 45.54 2.32
4420 8035 8.584157 TCCAGCTGAATATTTTGTGTTAACAAT 58.416 29.630 17.39 2.73 45.54 2.71
4421 8036 7.946207 TCCAGCTGAATATTTTGTGTTAACAA 58.054 30.769 17.39 0.00 44.59 2.83
4422 8037 7.517614 TCCAGCTGAATATTTTGTGTTAACA 57.482 32.000 17.39 3.59 0.00 2.41
4425 8040 9.066892 GGATATCCAGCTGAATATTTTGTGTTA 57.933 33.333 17.39 0.00 35.64 2.41
4426 8041 7.560991 TGGATATCCAGCTGAATATTTTGTGTT 59.439 33.333 20.98 0.00 42.01 3.32
4471 8086 8.644318 AATTAAAAGCTGGACGTACTATGTAG 57.356 34.615 0.00 0.00 0.00 2.74
4485 8100 7.588512 AGTAGCTGAAACTGAATTAAAAGCTG 58.411 34.615 0.00 0.00 0.00 4.24
4492 8107 5.721960 AGAGGGAGTAGCTGAAACTGAATTA 59.278 40.000 0.00 0.00 0.00 1.40
4497 8112 5.452636 GGAATAGAGGGAGTAGCTGAAACTG 60.453 48.000 0.00 0.00 0.00 3.16
4508 8123 7.039644 CGACACTTAATATGGAATAGAGGGAGT 60.040 40.741 0.00 0.00 28.50 3.85
4509 8124 7.316640 CGACACTTAATATGGAATAGAGGGAG 58.683 42.308 0.00 0.00 28.50 4.30
4510 8125 6.295123 GCGACACTTAATATGGAATAGAGGGA 60.295 42.308 0.00 0.00 28.50 4.20
4511 8126 5.869888 GCGACACTTAATATGGAATAGAGGG 59.130 44.000 0.00 0.00 28.50 4.30
4512 8127 6.587990 CAGCGACACTTAATATGGAATAGAGG 59.412 42.308 0.00 0.00 28.50 3.69
4513 8128 7.371159 TCAGCGACACTTAATATGGAATAGAG 58.629 38.462 0.00 0.00 28.50 2.43
4514 8129 7.284919 TCAGCGACACTTAATATGGAATAGA 57.715 36.000 0.00 0.00 28.50 1.98
4515 8130 7.946655 TTCAGCGACACTTAATATGGAATAG 57.053 36.000 0.00 0.00 28.50 1.73
4516 8131 8.902540 AATTCAGCGACACTTAATATGGAATA 57.097 30.769 0.00 0.00 0.00 1.75
4517 8132 7.807977 AATTCAGCGACACTTAATATGGAAT 57.192 32.000 0.00 0.00 0.00 3.01
4518 8133 7.985184 ACTAATTCAGCGACACTTAATATGGAA 59.015 33.333 0.00 0.00 0.00 3.53
4519 8134 7.497595 ACTAATTCAGCGACACTTAATATGGA 58.502 34.615 0.00 0.00 0.00 3.41
4520 8135 7.715265 ACTAATTCAGCGACACTTAATATGG 57.285 36.000 0.00 0.00 0.00 2.74
4521 8136 9.244799 TGTACTAATTCAGCGACACTTAATATG 57.755 33.333 0.00 0.00 0.00 1.78
4522 8137 9.811995 TTGTACTAATTCAGCGACACTTAATAT 57.188 29.630 0.00 0.00 0.00 1.28
4523 8138 9.642327 TTTGTACTAATTCAGCGACACTTAATA 57.358 29.630 0.00 0.00 0.00 0.98
4524 8139 8.542497 TTTGTACTAATTCAGCGACACTTAAT 57.458 30.769 0.00 0.00 0.00 1.40
4525 8140 7.654520 ACTTTGTACTAATTCAGCGACACTTAA 59.345 33.333 0.00 0.00 0.00 1.85
4526 8141 7.149973 ACTTTGTACTAATTCAGCGACACTTA 58.850 34.615 0.00 0.00 0.00 2.24
4527 8142 5.989777 ACTTTGTACTAATTCAGCGACACTT 59.010 36.000 0.00 0.00 0.00 3.16
4528 8143 5.539048 ACTTTGTACTAATTCAGCGACACT 58.461 37.500 0.00 0.00 0.00 3.55
4529 8144 5.840940 ACTTTGTACTAATTCAGCGACAC 57.159 39.130 0.00 0.00 0.00 3.67
4530 8145 6.655062 CAAACTTTGTACTAATTCAGCGACA 58.345 36.000 0.00 0.00 0.00 4.35
4531 8146 5.564127 GCAAACTTTGTACTAATTCAGCGAC 59.436 40.000 3.48 0.00 0.00 5.19
4532 8147 5.237561 TGCAAACTTTGTACTAATTCAGCGA 59.762 36.000 3.48 0.00 0.00 4.93
4533 8148 5.448438 TGCAAACTTTGTACTAATTCAGCG 58.552 37.500 3.48 0.00 0.00 5.18
4534 8149 5.858581 CCTGCAAACTTTGTACTAATTCAGC 59.141 40.000 3.48 0.00 0.00 4.26
4535 8150 7.202016 TCCTGCAAACTTTGTACTAATTCAG 57.798 36.000 3.48 0.32 0.00 3.02
4536 8151 6.206634 CCTCCTGCAAACTTTGTACTAATTCA 59.793 38.462 3.48 0.00 0.00 2.57
4537 8152 6.349363 CCCTCCTGCAAACTTTGTACTAATTC 60.349 42.308 3.48 0.00 0.00 2.17
4538 8153 5.476945 CCCTCCTGCAAACTTTGTACTAATT 59.523 40.000 3.48 0.00 0.00 1.40
4539 8154 5.010282 CCCTCCTGCAAACTTTGTACTAAT 58.990 41.667 3.48 0.00 0.00 1.73
4540 8155 4.103469 TCCCTCCTGCAAACTTTGTACTAA 59.897 41.667 3.48 0.00 0.00 2.24
4541 8156 3.649023 TCCCTCCTGCAAACTTTGTACTA 59.351 43.478 3.48 0.00 0.00 1.82
4542 8157 2.441750 TCCCTCCTGCAAACTTTGTACT 59.558 45.455 3.48 0.00 0.00 2.73
4543 8158 2.814336 CTCCCTCCTGCAAACTTTGTAC 59.186 50.000 3.48 0.00 0.00 2.90
4544 8159 2.441750 ACTCCCTCCTGCAAACTTTGTA 59.558 45.455 3.48 0.00 0.00 2.41
4545 8160 1.215423 ACTCCCTCCTGCAAACTTTGT 59.785 47.619 3.48 0.00 0.00 2.83
4546 8161 1.986882 ACTCCCTCCTGCAAACTTTG 58.013 50.000 0.00 0.00 0.00 2.77
4547 8162 2.711547 ACTACTCCCTCCTGCAAACTTT 59.288 45.455 0.00 0.00 0.00 2.66
4548 8163 2.339769 ACTACTCCCTCCTGCAAACTT 58.660 47.619 0.00 0.00 0.00 2.66
4549 8164 2.031495 ACTACTCCCTCCTGCAAACT 57.969 50.000 0.00 0.00 0.00 2.66
4550 8165 2.565834 TGTACTACTCCCTCCTGCAAAC 59.434 50.000 0.00 0.00 0.00 2.93
4551 8166 2.897350 TGTACTACTCCCTCCTGCAAA 58.103 47.619 0.00 0.00 0.00 3.68
4552 8167 2.615986 TGTACTACTCCCTCCTGCAA 57.384 50.000 0.00 0.00 0.00 4.08
4553 8168 2.848678 ATGTACTACTCCCTCCTGCA 57.151 50.000 0.00 0.00 0.00 4.41
4554 8169 4.153411 ACATATGTACTACTCCCTCCTGC 58.847 47.826 6.56 0.00 0.00 4.85
4555 8170 5.244178 GGAACATATGTACTACTCCCTCCTG 59.756 48.000 9.21 0.00 0.00 3.86
4556 8171 5.103215 TGGAACATATGTACTACTCCCTCCT 60.103 44.000 17.17 0.00 0.00 3.69
4557 8172 5.010820 GTGGAACATATGTACTACTCCCTCC 59.989 48.000 17.17 13.40 44.52 4.30
4558 8173 5.834204 AGTGGAACATATGTACTACTCCCTC 59.166 44.000 17.17 11.80 44.52 4.30
4559 8174 5.598830 CAGTGGAACATATGTACTACTCCCT 59.401 44.000 17.17 12.18 44.52 4.20
4560 8175 5.363005 ACAGTGGAACATATGTACTACTCCC 59.637 44.000 17.17 10.62 44.52 4.30
4561 8176 6.321690 AGACAGTGGAACATATGTACTACTCC 59.678 42.308 9.21 12.27 44.52 3.85
4562 8177 7.336161 AGACAGTGGAACATATGTACTACTC 57.664 40.000 9.21 2.24 44.52 2.59
4563 8178 7.719871 AAGACAGTGGAACATATGTACTACT 57.280 36.000 9.21 10.38 44.52 2.57
4564 8179 8.656849 CAAAAGACAGTGGAACATATGTACTAC 58.343 37.037 9.21 8.29 44.52 2.73
4565 8180 8.372459 ACAAAAGACAGTGGAACATATGTACTA 58.628 33.333 9.21 0.00 44.52 1.82
4566 8181 7.224297 ACAAAAGACAGTGGAACATATGTACT 58.776 34.615 9.21 6.36 44.52 2.73
4570 8185 9.345517 CAAATACAAAAGACAGTGGAACATATG 57.654 33.333 0.00 0.00 44.52 1.78


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.