Multiple sequence alignment - TraesCS2B01G322700

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G322700 chr2B 100.000 2985 0 0 490 3474 461252210 461249226 0.000000e+00 5513
1 TraesCS2B01G322700 chr2B 93.000 300 17 1 490 785 51101479 51101778 5.320000e-118 435
2 TraesCS2B01G322700 chr2B 92.929 297 20 1 490 785 671763560 671763856 6.890000e-117 431
3 TraesCS2B01G322700 chr2B 94.304 158 8 1 3317 3474 701086310 701086154 1.250000e-59 241
4 TraesCS2B01G322700 chr2B 100.000 120 0 0 1 120 461252699 461252580 4.510000e-54 222
5 TraesCS2B01G322700 chr2B 98.361 122 0 1 1 120 63805779 63805658 2.720000e-51 213
6 TraesCS2B01G322700 chr2B 96.721 122 2 1 1 120 44935695 44935574 5.880000e-48 202
7 TraesCS2B01G322700 chr2B 96.721 122 2 1 1 120 477578405 477578526 5.880000e-48 202
8 TraesCS2B01G322700 chr2D 93.808 1728 71 16 781 2478 389698509 389696788 0.000000e+00 2566
9 TraesCS2B01G322700 chr2D 91.941 273 22 0 2476 2748 389694822 389694550 1.960000e-102 383
10 TraesCS2B01G322700 chr2D 84.910 391 29 7 2951 3336 389669229 389668864 5.480000e-98 368
11 TraesCS2B01G322700 chr2D 92.265 181 13 1 2771 2950 389693737 389693557 4.450000e-64 255
12 TraesCS2B01G322700 chr2A 91.009 1735 95 22 786 2460 526280723 526278990 0.000000e+00 2283
13 TraesCS2B01G322700 chr2A 88.644 634 43 7 2704 3336 526277347 526276742 0.000000e+00 745
14 TraesCS2B01G322700 chr5B 94.257 296 17 0 490 785 270434483 270434778 1.470000e-123 453
15 TraesCS2B01G322700 chr5B 93.878 294 18 0 490 783 620015815 620016108 8.850000e-121 444
16 TraesCS2B01G322700 chr5B 93.243 296 20 0 490 785 659751345 659751640 1.480000e-118 436
17 TraesCS2B01G322700 chr5B 98.592 142 2 0 3333 3474 581718108 581717967 5.760000e-63 252
18 TraesCS2B01G322700 chr5B 93.865 163 8 2 3313 3474 477489374 477489535 9.630000e-61 244
19 TraesCS2B01G322700 chr5B 97.541 122 1 1 1 120 493476980 493476859 1.260000e-49 207
20 TraesCS2B01G322700 chr5B 96.721 122 2 1 1 120 711855504 711855383 5.880000e-48 202
21 TraesCS2B01G322700 chr1B 93.878 294 18 0 490 783 611691687 611691980 8.850000e-121 444
22 TraesCS2B01G322700 chr6B 93.581 296 18 1 490 785 646704775 646705069 1.140000e-119 440
23 TraesCS2B01G322700 chr6B 97.917 144 3 0 3331 3474 136911780 136911923 2.070000e-62 250
24 TraesCS2B01G322700 chr6B 97.279 147 3 1 3329 3474 21248834 21248980 7.450000e-62 248
25 TraesCS2B01G322700 chr4A 93.243 296 20 0 492 787 620002799 620002504 1.480000e-118 436
26 TraesCS2B01G322700 chr7B 92.929 297 20 1 490 786 742275678 742275383 6.890000e-117 431
27 TraesCS2B01G322700 chr7B 97.541 122 1 1 1 120 701285418 701285539 1.260000e-49 207
28 TraesCS2B01G322700 chr1A 97.297 148 4 0 3327 3474 366260441 366260294 5.760000e-63 252
29 TraesCS2B01G322700 chr1A 95.455 154 7 0 3321 3474 492228711 492228864 2.680000e-61 246
30 TraesCS2B01G322700 chr4B 95.484 155 5 2 3322 3474 175076013 175076167 2.680000e-61 246
31 TraesCS2B01G322700 chr4B 97.541 122 1 1 1 120 562346509 562346630 1.260000e-49 207
32 TraesCS2B01G322700 chr3A 94.839 155 7 1 3321 3474 9583274 9583428 1.250000e-59 241
33 TraesCS2B01G322700 chr3B 98.361 122 0 1 1 120 1418253 1418132 2.720000e-51 213
34 TraesCS2B01G322700 chr3B 97.541 122 1 1 1 120 596849782 596849661 1.260000e-49 207


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G322700 chr2B 461249226 461252699 3473 True 2867.5 5513 100.000000 1 3474 2 chr2B.!!$R4 3473
1 TraesCS2B01G322700 chr2D 389693557 389698509 4952 True 1068.0 2566 92.671333 781 2950 3 chr2D.!!$R2 2169
2 TraesCS2B01G322700 chr2A 526276742 526280723 3981 True 1514.0 2283 89.826500 786 3336 2 chr2A.!!$R1 2550

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
650 651 0.179081 GTGGGATAGTGCTTCCGACC 60.179 60.0 0.0 0.0 36.34 4.79 F
896 920 0.321653 CCGTTTCCTTGAGGACTGGG 60.322 60.0 0.0 0.0 45.39 4.45 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1987 2026 0.109532 TCACCGGTTCTGGAAATGCA 59.890 50.0 2.97 0.0 0.00 3.96 R
2654 6165 0.244994 AGACGATCAGCAGTCCACAC 59.755 55.0 0.00 0.0 38.08 3.82 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
50 51 4.767255 CGGCGGCAAGAAGAGGCT 62.767 66.667 10.53 0.00 0.00 4.58
51 52 3.130160 GGCGGCAAGAAGAGGCTG 61.130 66.667 3.07 0.00 39.40 4.85
53 54 3.494336 CGGCAAGAAGAGGCTGCG 61.494 66.667 0.00 0.00 0.00 5.18
54 55 3.808656 GGCAAGAAGAGGCTGCGC 61.809 66.667 0.00 0.00 0.00 6.09
55 56 4.157958 GCAAGAAGAGGCTGCGCG 62.158 66.667 0.00 0.00 0.00 6.86
56 57 2.433145 CAAGAAGAGGCTGCGCGA 60.433 61.111 12.10 0.00 0.00 5.87
57 58 2.125753 AAGAAGAGGCTGCGCGAG 60.126 61.111 12.10 5.65 0.00 5.03
58 59 3.655810 AAGAAGAGGCTGCGCGAGG 62.656 63.158 12.10 1.48 0.00 4.63
520 521 2.819595 GTGTGCGCGTCCATGGAT 60.820 61.111 19.62 0.00 0.00 3.41
521 522 2.819154 TGTGCGCGTCCATGGATG 60.819 61.111 27.02 27.02 0.00 3.51
563 564 4.517934 CGGGGCGTAGGAGGAGGA 62.518 72.222 0.00 0.00 0.00 3.71
564 565 2.522193 GGGGCGTAGGAGGAGGAG 60.522 72.222 0.00 0.00 0.00 3.69
565 566 2.601868 GGGCGTAGGAGGAGGAGA 59.398 66.667 0.00 0.00 0.00 3.71
566 567 1.529713 GGGCGTAGGAGGAGGAGAG 60.530 68.421 0.00 0.00 0.00 3.20
567 568 1.529713 GGCGTAGGAGGAGGAGAGG 60.530 68.421 0.00 0.00 0.00 3.69
568 569 1.532728 GCGTAGGAGGAGGAGAGGA 59.467 63.158 0.00 0.00 0.00 3.71
569 570 0.536460 GCGTAGGAGGAGGAGAGGAG 60.536 65.000 0.00 0.00 0.00 3.69
570 571 1.133363 CGTAGGAGGAGGAGAGGAGA 58.867 60.000 0.00 0.00 0.00 3.71
571 572 1.071699 CGTAGGAGGAGGAGAGGAGAG 59.928 61.905 0.00 0.00 0.00 3.20
572 573 2.414612 GTAGGAGGAGGAGAGGAGAGA 58.585 57.143 0.00 0.00 0.00 3.10
573 574 1.522900 AGGAGGAGGAGAGGAGAGAG 58.477 60.000 0.00 0.00 0.00 3.20
574 575 1.222567 GGAGGAGGAGAGGAGAGAGT 58.777 60.000 0.00 0.00 0.00 3.24
575 576 1.133792 GGAGGAGGAGAGGAGAGAGTG 60.134 61.905 0.00 0.00 0.00 3.51
576 577 0.258774 AGGAGGAGAGGAGAGAGTGC 59.741 60.000 0.00 0.00 0.00 4.40
577 578 1.101049 GGAGGAGAGGAGAGAGTGCG 61.101 65.000 0.00 0.00 0.00 5.34
578 579 1.077068 AGGAGAGGAGAGAGTGCGG 60.077 63.158 0.00 0.00 0.00 5.69
579 580 2.781158 GGAGAGGAGAGAGTGCGGC 61.781 68.421 0.00 0.00 0.00 6.53
580 581 3.119709 GAGAGGAGAGAGTGCGGCG 62.120 68.421 0.51 0.51 0.00 6.46
581 582 4.863925 GAGGAGAGAGTGCGGCGC 62.864 72.222 27.44 27.44 0.00 6.53
599 600 3.918220 GAGCGCTCGAATGTGCCG 61.918 66.667 23.61 0.00 43.73 5.69
628 629 3.206957 GGGCGCCCGAAATACACC 61.207 66.667 33.60 2.25 0.00 4.16
629 630 3.569690 GGCGCCCGAAATACACCG 61.570 66.667 18.11 0.00 0.00 4.94
630 631 4.232248 GCGCCCGAAATACACCGC 62.232 66.667 0.00 0.00 34.50 5.68
631 632 3.920553 CGCCCGAAATACACCGCG 61.921 66.667 0.00 0.00 0.00 6.46
632 633 2.816520 GCCCGAAATACACCGCGT 60.817 61.111 4.92 0.00 0.00 6.01
633 634 3.086309 CCCGAAATACACCGCGTG 58.914 61.111 4.92 6.23 39.75 5.34
634 635 2.457778 CCCGAAATACACCGCGTGG 61.458 63.158 14.93 14.93 37.94 4.94
635 636 2.457778 CCGAAATACACCGCGTGGG 61.458 63.158 21.14 10.90 40.75 4.61
636 637 1.446445 CGAAATACACCGCGTGGGA 60.446 57.895 21.14 4.31 40.75 4.37
637 638 0.808453 CGAAATACACCGCGTGGGAT 60.808 55.000 21.14 9.31 40.75 3.85
638 639 1.536496 CGAAATACACCGCGTGGGATA 60.536 52.381 21.14 11.40 40.75 2.59
639 640 2.132762 GAAATACACCGCGTGGGATAG 58.867 52.381 21.14 8.65 40.75 2.08
640 641 1.117150 AATACACCGCGTGGGATAGT 58.883 50.000 21.14 14.07 40.75 2.12
641 642 0.387929 ATACACCGCGTGGGATAGTG 59.612 55.000 21.14 10.53 40.75 2.74
642 643 2.287457 TACACCGCGTGGGATAGTGC 62.287 60.000 21.14 0.00 40.75 4.40
643 644 3.075005 ACCGCGTGGGATAGTGCT 61.075 61.111 21.14 0.00 40.75 4.40
644 645 2.186903 CCGCGTGGGATAGTGCTT 59.813 61.111 7.26 0.00 38.47 3.91
645 646 1.883084 CCGCGTGGGATAGTGCTTC 60.883 63.158 7.26 0.00 38.47 3.86
646 647 1.883084 CGCGTGGGATAGTGCTTCC 60.883 63.158 0.00 0.00 0.00 3.46
647 648 1.883084 GCGTGGGATAGTGCTTCCG 60.883 63.158 0.00 0.00 33.82 4.30
648 649 1.813859 CGTGGGATAGTGCTTCCGA 59.186 57.895 0.00 0.00 33.82 4.55
649 650 0.527817 CGTGGGATAGTGCTTCCGAC 60.528 60.000 0.00 0.00 38.28 4.79
650 651 0.179081 GTGGGATAGTGCTTCCGACC 60.179 60.000 0.00 0.00 36.34 4.79
651 652 1.067582 GGGATAGTGCTTCCGACCG 59.932 63.158 0.00 0.00 33.82 4.79
652 653 1.673808 GGGATAGTGCTTCCGACCGT 61.674 60.000 0.00 0.00 33.82 4.83
653 654 0.527817 GGATAGTGCTTCCGACCGTG 60.528 60.000 0.00 0.00 0.00 4.94
654 655 1.146358 GATAGTGCTTCCGACCGTGC 61.146 60.000 0.00 0.00 0.00 5.34
655 656 2.884087 ATAGTGCTTCCGACCGTGCG 62.884 60.000 0.00 0.00 0.00 5.34
659 660 4.124351 CTTCCGACCGTGCGCCTA 62.124 66.667 4.18 0.00 0.00 3.93
660 661 3.636313 CTTCCGACCGTGCGCCTAA 62.636 63.158 4.18 0.00 0.00 2.69
661 662 3.919973 TTCCGACCGTGCGCCTAAC 62.920 63.158 4.18 0.00 0.00 2.34
662 663 4.430765 CCGACCGTGCGCCTAACT 62.431 66.667 4.18 0.00 0.00 2.24
663 664 2.879462 CGACCGTGCGCCTAACTC 60.879 66.667 4.18 0.00 0.00 3.01
664 665 2.879462 GACCGTGCGCCTAACTCG 60.879 66.667 4.18 0.00 0.00 4.18
665 666 3.621892 GACCGTGCGCCTAACTCGT 62.622 63.158 4.18 0.00 0.00 4.18
666 667 2.431942 CCGTGCGCCTAACTCGTT 60.432 61.111 4.18 0.00 0.00 3.85
667 668 1.153978 CCGTGCGCCTAACTCGTTA 60.154 57.895 4.18 0.00 0.00 3.18
668 669 0.526954 CCGTGCGCCTAACTCGTTAT 60.527 55.000 4.18 0.00 0.00 1.89
669 670 1.268692 CCGTGCGCCTAACTCGTTATA 60.269 52.381 4.18 0.00 0.00 0.98
670 671 2.041966 CGTGCGCCTAACTCGTTATAG 58.958 52.381 4.18 0.00 0.00 1.31
671 672 2.286595 CGTGCGCCTAACTCGTTATAGA 60.287 50.000 4.18 0.00 0.00 1.98
672 673 3.298317 GTGCGCCTAACTCGTTATAGAG 58.702 50.000 4.18 0.00 43.56 2.43
673 674 2.287427 TGCGCCTAACTCGTTATAGAGC 60.287 50.000 4.18 8.00 41.77 4.09
674 675 2.572243 CGCCTAACTCGTTATAGAGCG 58.428 52.381 0.00 0.00 41.77 5.03
675 676 2.317684 GCCTAACTCGTTATAGAGCGC 58.682 52.381 0.00 0.00 41.77 5.92
676 677 2.572243 CCTAACTCGTTATAGAGCGCG 58.428 52.381 0.00 0.00 41.77 6.86
677 678 1.970608 CTAACTCGTTATAGAGCGCGC 59.029 52.381 26.66 26.66 41.77 6.86
678 679 0.928908 AACTCGTTATAGAGCGCGCG 60.929 55.000 28.44 28.44 41.77 6.86
679 680 2.698432 CTCGTTATAGAGCGCGCGC 61.698 63.158 45.10 45.10 42.33 6.86
680 681 3.753539 CGTTATAGAGCGCGCGCC 61.754 66.667 46.98 36.71 43.17 6.53
681 682 3.753539 GTTATAGAGCGCGCGCCG 61.754 66.667 46.98 21.37 43.17 6.46
682 683 4.260355 TTATAGAGCGCGCGCCGT 62.260 61.111 46.98 36.34 43.17 5.68
683 684 3.761445 TTATAGAGCGCGCGCCGTT 62.761 57.895 46.98 34.09 43.17 4.44
684 685 3.761445 TATAGAGCGCGCGCCGTTT 62.761 57.895 46.98 31.94 43.17 3.60
729 730 2.764515 CGTTACGCGCACGCTAAA 59.235 55.556 17.19 4.24 45.53 1.85
730 731 1.128214 CGTTACGCGCACGCTAAAA 59.872 52.632 17.19 1.72 45.53 1.52
731 732 1.110612 CGTTACGCGCACGCTAAAAC 61.111 55.000 17.19 12.37 45.53 2.43
732 733 1.110612 GTTACGCGCACGCTAAAACG 61.111 55.000 13.70 0.00 45.53 3.60
733 734 2.212998 TTACGCGCACGCTAAAACGG 62.213 55.000 13.70 0.00 45.53 4.44
734 735 3.769358 CGCGCACGCTAAAACGGA 61.769 61.111 13.70 0.00 39.32 4.69
735 736 2.202133 GCGCACGCTAAAACGGAC 60.202 61.111 7.96 0.00 38.26 4.79
736 737 2.664436 GCGCACGCTAAAACGGACT 61.664 57.895 7.96 0.00 38.26 3.85
737 738 1.346378 GCGCACGCTAAAACGGACTA 61.346 55.000 7.96 0.00 38.26 2.59
738 739 1.062258 CGCACGCTAAAACGGACTAA 58.938 50.000 0.00 0.00 37.37 2.24
739 740 1.657094 CGCACGCTAAAACGGACTAAT 59.343 47.619 0.00 0.00 37.37 1.73
740 741 2.093152 CGCACGCTAAAACGGACTAATT 59.907 45.455 0.00 0.00 37.37 1.40
741 742 3.423907 CGCACGCTAAAACGGACTAATTT 60.424 43.478 0.00 0.00 37.37 1.82
742 743 4.201608 CGCACGCTAAAACGGACTAATTTA 60.202 41.667 0.00 0.00 37.37 1.40
743 744 5.017612 GCACGCTAAAACGGACTAATTTAC 58.982 41.667 0.00 0.00 37.37 2.01
744 745 5.242877 CACGCTAAAACGGACTAATTTACG 58.757 41.667 0.00 0.00 37.37 3.18
745 746 4.327087 ACGCTAAAACGGACTAATTTACGG 59.673 41.667 0.00 0.00 37.37 4.02
746 747 4.581493 GCTAAAACGGACTAATTTACGGC 58.419 43.478 0.00 0.00 0.00 5.68
747 748 3.727780 AAAACGGACTAATTTACGGCG 57.272 42.857 4.80 4.80 0.00 6.46
748 749 1.001624 AACGGACTAATTTACGGCGC 58.998 50.000 6.90 0.00 0.00 6.53
749 750 1.141591 ACGGACTAATTTACGGCGCG 61.142 55.000 6.90 0.00 0.00 6.86
750 751 1.814211 CGGACTAATTTACGGCGCGG 61.814 60.000 14.03 14.03 0.00 6.46
751 752 1.274770 GACTAATTTACGGCGCGGC 59.725 57.895 24.49 24.49 0.00 6.53
752 753 2.244382 CTAATTTACGGCGCGGCG 59.756 61.111 46.57 46.57 0.00 6.46
769 770 3.006706 GCTAGTTTAGCGCGGCTG 58.993 61.111 8.83 0.00 42.62 4.85
770 771 1.810030 GCTAGTTTAGCGCGGCTGT 60.810 57.895 8.83 0.00 42.62 4.40
771 772 1.359459 GCTAGTTTAGCGCGGCTGTT 61.359 55.000 8.83 0.00 42.62 3.16
772 773 0.370273 CTAGTTTAGCGCGGCTGTTG 59.630 55.000 8.83 0.00 40.10 3.33
773 774 1.017177 TAGTTTAGCGCGGCTGTTGG 61.017 55.000 8.83 0.00 40.10 3.77
774 775 2.031314 TTTAGCGCGGCTGTTGGA 59.969 55.556 8.83 0.00 40.10 3.53
775 776 2.032634 TTTAGCGCGGCTGTTGGAG 61.033 57.895 8.83 0.00 40.10 3.86
776 777 2.443260 TTTAGCGCGGCTGTTGGAGA 62.443 55.000 8.83 0.00 40.10 3.71
777 778 2.238847 TTAGCGCGGCTGTTGGAGAT 62.239 55.000 8.83 0.00 40.10 2.75
778 779 2.906182 TAGCGCGGCTGTTGGAGATG 62.906 60.000 8.83 0.00 40.10 2.90
779 780 3.869272 CGCGGCTGTTGGAGATGC 61.869 66.667 0.00 0.00 0.00 3.91
780 781 2.437359 GCGGCTGTTGGAGATGCT 60.437 61.111 0.00 0.00 0.00 3.79
781 782 2.467826 GCGGCTGTTGGAGATGCTC 61.468 63.158 0.00 0.00 0.00 4.26
782 783 1.220206 CGGCTGTTGGAGATGCTCT 59.780 57.895 0.00 0.00 0.00 4.09
783 784 0.392193 CGGCTGTTGGAGATGCTCTT 60.392 55.000 0.00 0.00 0.00 2.85
784 785 1.134699 CGGCTGTTGGAGATGCTCTTA 60.135 52.381 0.00 0.00 0.00 2.10
846 855 1.004277 CAACCACGTCGCTCTCAGTC 61.004 60.000 0.00 0.00 0.00 3.51
896 920 0.321653 CCGTTTCCTTGAGGACTGGG 60.322 60.000 0.00 0.00 45.39 4.45
903 927 1.002403 TTGAGGACTGGGCGGGATA 59.998 57.895 0.00 0.00 0.00 2.59
920 944 0.759346 ATATCTTCCCCTCGGCACAC 59.241 55.000 0.00 0.00 0.00 3.82
972 996 5.475564 ACTTGCGAGCTTAAAATTTTCCCTA 59.524 36.000 6.72 0.00 0.00 3.53
1175 1205 1.144716 GCGCACATCAGGATGGAGA 59.855 57.895 13.40 0.00 42.91 3.71
1330 1360 0.842467 AAGGGGTAAGGCAGTGCTCT 60.842 55.000 16.11 7.70 0.00 4.09
1374 1404 1.800655 CGCCACGAGATCCTTCTTCTG 60.801 57.143 0.00 0.00 30.30 3.02
1525 1555 2.817834 GTGCGCCGCCAGATGTTA 60.818 61.111 6.63 0.00 0.00 2.41
1537 1567 3.007398 GCCAGATGTTAATCCTCGATCCT 59.993 47.826 0.00 0.00 32.77 3.24
1631 1661 4.424711 GGCGGCCCATGAGTTCCA 62.425 66.667 8.12 0.00 0.00 3.53
1633 1663 2.819595 CGGCCCATGAGTTCCACG 60.820 66.667 0.00 0.00 0.00 4.94
1637 1667 1.899437 GCCCATGAGTTCCACGGAGA 61.899 60.000 0.00 0.00 27.01 3.71
1712 1742 1.470979 GCAGCTTCGTCCTCGGAATTA 60.471 52.381 0.00 0.00 37.69 1.40
1714 1744 3.458189 CAGCTTCGTCCTCGGAATTATT 58.542 45.455 0.00 0.00 37.69 1.40
1721 1751 3.064207 GTCCTCGGAATTATTATGCGCA 58.936 45.455 14.96 14.96 0.00 6.09
1767 1797 4.988598 CGTGGCCGAGTGCTTGGT 62.989 66.667 0.00 0.00 40.92 3.67
1781 1811 3.741830 TTGGTGTCGCGGTTGCTCA 62.742 57.895 6.13 0.00 39.65 4.26
1789 1819 2.671070 CGGTTGCTCACCCCTGAT 59.329 61.111 0.50 0.00 43.83 2.90
1982 2021 4.216257 ACAAAAACTCCATGACGAGATTGG 59.784 41.667 6.04 2.10 33.83 3.16
1987 2026 0.107508 CCATGACGAGATTGGCAGGT 60.108 55.000 0.00 0.00 0.00 4.00
1999 2038 0.178967 TGGCAGGTGCATTTCCAGAA 60.179 50.000 4.01 0.00 44.36 3.02
2088 2133 1.874345 AAGAAGACATCGCCGTCGGT 61.874 55.000 13.94 0.00 40.98 4.69
2197 2242 4.237445 GAGGTGATCGACGGGAGA 57.763 61.111 0.00 0.00 0.00 3.71
2214 2287 0.534412 AGACGGAATGAGCAGGTCTG 59.466 55.000 0.38 0.00 36.66 3.51
2218 2291 1.028868 GGAATGAGCAGGTCTGGCAC 61.029 60.000 0.38 0.00 0.00 5.01
2316 2392 4.444838 ACAAGTATCGCCGGCGCA 62.445 61.111 42.78 30.59 39.59 6.09
2369 2445 1.335142 CCTACCTATGCGTCGAGAAGC 60.335 57.143 0.00 4.12 36.35 3.86
2421 2497 3.181434 ACCCAGTGGCAGTTTTGAAGATA 60.181 43.478 2.61 0.00 33.59 1.98
2523 4567 4.343231 TGCATCTACCAAATGTTGTGGAT 58.657 39.130 0.00 0.00 39.62 3.41
2524 4568 4.398988 TGCATCTACCAAATGTTGTGGATC 59.601 41.667 0.00 0.00 39.62 3.36
2537 4581 4.696877 TGTTGTGGATCATAGCTTGAACAG 59.303 41.667 0.00 0.00 38.03 3.16
2567 6078 7.775120 CATTCAGTTTATTGGAATGGTAAGCT 58.225 34.615 0.00 0.00 42.48 3.74
2632 6143 4.906437 CGAAGCTAAAGTCAAGTTTTGCTC 59.094 41.667 16.03 10.57 44.36 4.26
2639 6150 5.757850 AAGTCAAGTTTTGCTCTGGTTAG 57.242 39.130 0.00 0.00 0.00 2.34
2654 6165 3.207778 TGGTTAGTCTTCCAAAACCGTG 58.792 45.455 0.00 0.00 43.53 4.94
2665 6176 0.393808 AAAACCGTGTGTGGACTGCT 60.394 50.000 0.00 0.00 0.00 4.24
2682 6193 0.033228 GCTGATCGTCTGGCTGCTAT 59.967 55.000 0.00 0.00 0.00 2.97
2689 6200 0.761187 GTCTGGCTGCTATGGGATGA 59.239 55.000 0.00 0.00 0.00 2.92
2700 6211 0.032117 ATGGGATGACCTCACTCGGA 60.032 55.000 0.00 0.00 41.11 4.55
2734 6245 3.029570 CTGTGATCAGGAGATGGAGACA 58.970 50.000 0.00 0.00 40.60 3.41
2735 6246 3.642377 CTGTGATCAGGAGATGGAGACAT 59.358 47.826 0.00 0.00 45.07 3.06
2758 6269 1.097547 CGCACCTAATCTTGGGCTGG 61.098 60.000 0.00 0.00 30.94 4.85
2761 6272 1.281867 CACCTAATCTTGGGCTGGTCA 59.718 52.381 0.00 0.00 30.94 4.02
2767 7068 1.661463 TCTTGGGCTGGTCATTCTCT 58.339 50.000 0.00 0.00 0.00 3.10
2768 7069 1.556911 TCTTGGGCTGGTCATTCTCTC 59.443 52.381 0.00 0.00 0.00 3.20
2769 7070 0.620556 TTGGGCTGGTCATTCTCTCC 59.379 55.000 0.00 0.00 0.00 3.71
2823 7125 1.293062 AGGGATTCTGTGCTGGTCAT 58.707 50.000 0.00 0.00 0.00 3.06
2936 7238 1.281867 TCGCCTGGAACATCTGGAAAT 59.718 47.619 0.00 0.00 38.20 2.17
2940 7242 4.526970 GCCTGGAACATCTGGAAATAGAA 58.473 43.478 0.00 0.00 38.20 2.10
2951 7253 7.017056 ACATCTGGAAATAGAAGAATAGGAGGG 59.983 40.741 0.00 0.00 0.00 4.30
2952 7254 6.693599 TCTGGAAATAGAAGAATAGGAGGGA 58.306 40.000 0.00 0.00 0.00 4.20
2989 7292 0.321564 CCTTGGCATTGACGAGGTGA 60.322 55.000 16.86 0.00 37.45 4.02
3041 7344 0.461339 GGATTGGCTTTCCGCGAGTA 60.461 55.000 8.23 0.00 40.44 2.59
3053 7356 0.706729 CGCGAGTAGTCGGTGTTTTC 59.293 55.000 20.94 2.11 46.91 2.29
3058 7361 3.190118 CGAGTAGTCGGTGTTTTCTAGGT 59.810 47.826 12.29 0.00 42.87 3.08
3089 7392 9.462606 TTTCCTTCTACTTTTCTCTCTTGTTTT 57.537 29.630 0.00 0.00 0.00 2.43
3126 7429 4.142902 CCCTGACGATTTTGTCATGTACAC 60.143 45.833 0.00 0.00 46.98 2.90
3128 7431 5.179368 CCTGACGATTTTGTCATGTACACTT 59.821 40.000 0.00 0.00 46.98 3.16
3130 7433 7.112528 TGACGATTTTGTCATGTACACTTAC 57.887 36.000 0.00 0.00 43.62 2.34
3147 7450 5.017490 CACTTACTCCTCCTTTCTACTCCA 58.983 45.833 0.00 0.00 0.00 3.86
3188 7491 0.734889 CTGCCATAGCCCGTCAAAAG 59.265 55.000 0.00 0.00 38.69 2.27
3189 7492 0.326595 TGCCATAGCCCGTCAAAAGA 59.673 50.000 0.00 0.00 38.69 2.52
3190 7493 1.271652 TGCCATAGCCCGTCAAAAGAA 60.272 47.619 0.00 0.00 38.69 2.52
3191 7494 1.816224 GCCATAGCCCGTCAAAAGAAA 59.184 47.619 0.00 0.00 0.00 2.52
3192 7495 2.230266 GCCATAGCCCGTCAAAAGAAAA 59.770 45.455 0.00 0.00 0.00 2.29
3231 7534 6.001449 AGCATAGGCCAGTGAAGTAATTAA 57.999 37.500 5.01 0.00 42.56 1.40
3234 7537 6.458342 GCATAGGCCAGTGAAGTAATTAACAC 60.458 42.308 5.01 9.32 0.00 3.32
3240 7543 5.447279 CCAGTGAAGTAATTAACACCATCGC 60.447 44.000 12.13 0.51 34.33 4.58
3244 7547 4.389890 AGTAATTAACACCATCGCCGTA 57.610 40.909 0.00 0.00 0.00 4.02
3245 7548 4.114794 AGTAATTAACACCATCGCCGTAC 58.885 43.478 0.00 0.00 0.00 3.67
3246 7549 2.973694 ATTAACACCATCGCCGTACT 57.026 45.000 0.00 0.00 0.00 2.73
3247 7550 2.747396 TTAACACCATCGCCGTACTT 57.253 45.000 0.00 0.00 0.00 2.24
3248 7551 2.747396 TAACACCATCGCCGTACTTT 57.253 45.000 0.00 0.00 0.00 2.66
3249 7552 1.886886 AACACCATCGCCGTACTTTT 58.113 45.000 0.00 0.00 0.00 2.27
3250 7553 1.886886 ACACCATCGCCGTACTTTTT 58.113 45.000 0.00 0.00 0.00 1.94
3290 7593 4.258702 AGTAACATGGCGATATGGAGAC 57.741 45.455 0.00 0.48 32.32 3.36
3294 7597 0.603569 ATGGCGATATGGAGACGACC 59.396 55.000 0.00 0.00 33.87 4.79
3318 7621 6.202937 CGTGTAGAGAGATAAGTTGATGGTC 58.797 44.000 0.00 0.00 0.00 4.02
3324 7627 5.848406 AGAGATAAGTTGATGGTCGGAATC 58.152 41.667 0.00 0.00 0.00 2.52
3336 7639 6.608405 TGATGGTCGGAATCCTAAGTTTACTA 59.392 38.462 0.00 0.00 0.00 1.82
3337 7640 6.461110 TGGTCGGAATCCTAAGTTTACTAG 57.539 41.667 0.00 0.00 0.00 2.57
3338 7641 5.954150 TGGTCGGAATCCTAAGTTTACTAGT 59.046 40.000 0.00 0.00 0.00 2.57
3339 7642 7.118723 TGGTCGGAATCCTAAGTTTACTAGTA 58.881 38.462 0.00 0.00 0.00 1.82
3340 7643 7.781693 TGGTCGGAATCCTAAGTTTACTAGTAT 59.218 37.037 2.79 0.00 0.00 2.12
3341 7644 9.289782 GGTCGGAATCCTAAGTTTACTAGTATA 57.710 37.037 2.79 0.00 0.00 1.47
3344 7647 9.604626 CGGAATCCTAAGTTTACTAGTATAACG 57.395 37.037 2.79 0.50 0.00 3.18
3345 7648 9.404348 GGAATCCTAAGTTTACTAGTATAACGC 57.596 37.037 2.79 0.00 0.00 4.84
3346 7649 9.404348 GAATCCTAAGTTTACTAGTATAACGCC 57.596 37.037 2.79 0.00 0.00 5.68
3347 7650 7.277174 TCCTAAGTTTACTAGTATAACGCCC 57.723 40.000 2.79 0.00 0.00 6.13
3348 7651 6.017109 TCCTAAGTTTACTAGTATAACGCCCG 60.017 42.308 2.79 3.72 0.00 6.13
3349 7652 5.582689 AAGTTTACTAGTATAACGCCCGT 57.417 39.130 2.79 0.00 0.00 5.28
3350 7653 4.925068 AGTTTACTAGTATAACGCCCGTG 58.075 43.478 2.79 0.00 0.00 4.94
3351 7654 3.354089 TTACTAGTATAACGCCCGTGC 57.646 47.619 2.79 0.00 0.00 5.34
3368 7671 3.550656 CGTTGTCACGGGCTCTTC 58.449 61.111 0.00 0.00 43.16 2.87
3369 7672 1.300620 CGTTGTCACGGGCTCTTCA 60.301 57.895 0.00 0.00 43.16 3.02
3370 7673 0.878523 CGTTGTCACGGGCTCTTCAA 60.879 55.000 0.00 0.00 43.16 2.69
3371 7674 1.305201 GTTGTCACGGGCTCTTCAAA 58.695 50.000 0.00 0.00 0.00 2.69
3372 7675 1.673920 GTTGTCACGGGCTCTTCAAAA 59.326 47.619 0.00 0.00 0.00 2.44
3373 7676 2.270352 TGTCACGGGCTCTTCAAAAT 57.730 45.000 0.00 0.00 0.00 1.82
3374 7677 2.582052 TGTCACGGGCTCTTCAAAATT 58.418 42.857 0.00 0.00 0.00 1.82
3375 7678 2.955660 TGTCACGGGCTCTTCAAAATTT 59.044 40.909 0.00 0.00 0.00 1.82
3376 7679 4.138290 TGTCACGGGCTCTTCAAAATTTA 58.862 39.130 0.00 0.00 0.00 1.40
3377 7680 4.764823 TGTCACGGGCTCTTCAAAATTTAT 59.235 37.500 0.00 0.00 0.00 1.40
3378 7681 5.941058 TGTCACGGGCTCTTCAAAATTTATA 59.059 36.000 0.00 0.00 0.00 0.98
3379 7682 6.431543 TGTCACGGGCTCTTCAAAATTTATAA 59.568 34.615 0.00 0.00 0.00 0.98
3380 7683 7.122055 TGTCACGGGCTCTTCAAAATTTATAAT 59.878 33.333 0.00 0.00 0.00 1.28
3381 7684 7.644157 GTCACGGGCTCTTCAAAATTTATAATC 59.356 37.037 0.00 0.00 0.00 1.75
3382 7685 7.338196 TCACGGGCTCTTCAAAATTTATAATCA 59.662 33.333 0.00 0.00 0.00 2.57
3383 7686 7.645340 CACGGGCTCTTCAAAATTTATAATCAG 59.355 37.037 0.00 0.00 0.00 2.90
3384 7687 7.339466 ACGGGCTCTTCAAAATTTATAATCAGT 59.661 33.333 0.00 0.00 0.00 3.41
3385 7688 8.836413 CGGGCTCTTCAAAATTTATAATCAGTA 58.164 33.333 0.00 0.00 0.00 2.74
3404 7707 9.525826 AATCAGTATCTTTCATTTATCATCCCC 57.474 33.333 0.00 0.00 0.00 4.81
3405 7708 8.280258 TCAGTATCTTTCATTTATCATCCCCT 57.720 34.615 0.00 0.00 0.00 4.79
3406 7709 8.378565 TCAGTATCTTTCATTTATCATCCCCTC 58.621 37.037 0.00 0.00 0.00 4.30
3407 7710 8.159447 CAGTATCTTTCATTTATCATCCCCTCA 58.841 37.037 0.00 0.00 0.00 3.86
3408 7711 8.898728 AGTATCTTTCATTTATCATCCCCTCAT 58.101 33.333 0.00 0.00 0.00 2.90
3412 7715 9.524496 TCTTTCATTTATCATCCCCTCATATTG 57.476 33.333 0.00 0.00 0.00 1.90
3413 7716 8.654485 TTTCATTTATCATCCCCTCATATTGG 57.346 34.615 0.00 0.00 0.00 3.16
3414 7717 6.734532 TCATTTATCATCCCCTCATATTGGG 58.265 40.000 3.99 3.99 44.19 4.12
3415 7718 6.277761 TCATTTATCATCCCCTCATATTGGGT 59.722 38.462 9.13 0.00 43.09 4.51
3416 7719 5.519183 TTATCATCCCCTCATATTGGGTG 57.481 43.478 9.13 3.35 43.09 4.61
3417 7720 3.073411 TCATCCCCTCATATTGGGTGA 57.927 47.619 9.13 5.25 43.09 4.02
3418 7721 3.612458 TCATCCCCTCATATTGGGTGAT 58.388 45.455 9.13 8.42 43.09 3.06
3419 7722 3.989558 TCATCCCCTCATATTGGGTGATT 59.010 43.478 9.13 0.00 43.09 2.57
3420 7723 5.169438 TCATCCCCTCATATTGGGTGATTA 58.831 41.667 9.13 2.62 43.09 1.75
3421 7724 5.797457 TCATCCCCTCATATTGGGTGATTAT 59.203 40.000 9.13 0.00 43.09 1.28
3422 7725 5.519183 TCCCCTCATATTGGGTGATTATG 57.481 43.478 9.13 0.00 43.09 1.90
3423 7726 4.292041 TCCCCTCATATTGGGTGATTATGG 59.708 45.833 9.13 0.00 43.09 2.74
3424 7727 4.570505 CCCCTCATATTGGGTGATTATGGG 60.571 50.000 9.13 0.00 43.09 4.00
3425 7728 4.570505 CCCTCATATTGGGTGATTATGGGG 60.571 50.000 1.78 1.78 39.82 4.96
3426 7729 4.044571 CCTCATATTGGGTGATTATGGGGT 59.955 45.833 0.00 0.00 34.83 4.95
3427 7730 4.996793 TCATATTGGGTGATTATGGGGTG 58.003 43.478 0.00 0.00 0.00 4.61
3428 7731 2.086610 ATTGGGTGATTATGGGGTGC 57.913 50.000 0.00 0.00 0.00 5.01
3429 7732 1.006813 TTGGGTGATTATGGGGTGCT 58.993 50.000 0.00 0.00 0.00 4.40
3430 7733 0.550914 TGGGTGATTATGGGGTGCTC 59.449 55.000 0.00 0.00 0.00 4.26
3431 7734 0.846693 GGGTGATTATGGGGTGCTCT 59.153 55.000 0.00 0.00 0.00 4.09
3432 7735 2.054799 GGGTGATTATGGGGTGCTCTA 58.945 52.381 0.00 0.00 0.00 2.43
3433 7736 2.441750 GGGTGATTATGGGGTGCTCTAA 59.558 50.000 0.00 0.00 0.00 2.10
3434 7737 3.074538 GGGTGATTATGGGGTGCTCTAAT 59.925 47.826 0.00 0.00 0.00 1.73
3435 7738 4.447762 GGGTGATTATGGGGTGCTCTAATT 60.448 45.833 0.00 0.00 0.00 1.40
3436 7739 5.222048 GGGTGATTATGGGGTGCTCTAATTA 60.222 44.000 0.00 0.00 0.00 1.40
3437 7740 6.303839 GGTGATTATGGGGTGCTCTAATTAA 58.696 40.000 0.00 0.00 0.00 1.40
3438 7741 6.775629 GGTGATTATGGGGTGCTCTAATTAAA 59.224 38.462 0.00 0.00 0.00 1.52
3439 7742 7.286775 GGTGATTATGGGGTGCTCTAATTAAAA 59.713 37.037 0.00 0.00 0.00 1.52
3440 7743 8.691797 GTGATTATGGGGTGCTCTAATTAAAAA 58.308 33.333 0.00 0.00 0.00 1.94
3441 7744 8.691797 TGATTATGGGGTGCTCTAATTAAAAAC 58.308 33.333 0.00 0.00 0.00 2.43
3442 7745 8.602472 ATTATGGGGTGCTCTAATTAAAAACA 57.398 30.769 0.00 0.00 0.00 2.83
3443 7746 5.715434 TGGGGTGCTCTAATTAAAAACAC 57.285 39.130 0.00 0.00 0.00 3.32
3444 7747 5.141182 TGGGGTGCTCTAATTAAAAACACA 58.859 37.500 8.80 0.00 0.00 3.72
3445 7748 5.598830 TGGGGTGCTCTAATTAAAAACACAA 59.401 36.000 8.80 0.00 0.00 3.33
3446 7749 5.924254 GGGGTGCTCTAATTAAAAACACAAC 59.076 40.000 8.80 0.00 0.00 3.32
3447 7750 6.461788 GGGGTGCTCTAATTAAAAACACAACA 60.462 38.462 8.80 0.00 0.00 3.33
3448 7751 6.981559 GGGTGCTCTAATTAAAAACACAACAA 59.018 34.615 8.80 0.00 0.00 2.83
3449 7752 7.655732 GGGTGCTCTAATTAAAAACACAACAAT 59.344 33.333 8.80 0.00 0.00 2.71
3450 7753 8.699749 GGTGCTCTAATTAAAAACACAACAATC 58.300 33.333 8.80 0.00 0.00 2.67
3451 7754 9.243637 GTGCTCTAATTAAAAACACAACAATCA 57.756 29.630 0.00 0.00 0.00 2.57
3452 7755 9.809096 TGCTCTAATTAAAAACACAACAATCAA 57.191 25.926 0.00 0.00 0.00 2.57
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
33 34 4.767255 AGCCTCTTCTTGCCGCCG 62.767 66.667 0.00 0.00 0.00 6.46
34 35 3.130160 CAGCCTCTTCTTGCCGCC 61.130 66.667 0.00 0.00 0.00 6.13
35 36 3.808656 GCAGCCTCTTCTTGCCGC 61.809 66.667 0.00 0.00 0.00 6.53
36 37 3.494336 CGCAGCCTCTTCTTGCCG 61.494 66.667 0.00 0.00 0.00 5.69
503 504 2.819595 ATCCATGGACGCGCACAC 60.820 61.111 18.99 0.00 0.00 3.82
504 505 2.819154 CATCCATGGACGCGCACA 60.819 61.111 18.99 5.75 0.00 4.57
546 547 4.517934 TCCTCCTCCTACGCCCCG 62.518 72.222 0.00 0.00 0.00 5.73
547 548 2.522193 CTCCTCCTCCTACGCCCC 60.522 72.222 0.00 0.00 0.00 5.80
548 549 1.529713 CTCTCCTCCTCCTACGCCC 60.530 68.421 0.00 0.00 0.00 6.13
549 550 1.529713 CCTCTCCTCCTCCTACGCC 60.530 68.421 0.00 0.00 0.00 5.68
550 551 0.536460 CTCCTCTCCTCCTCCTACGC 60.536 65.000 0.00 0.00 0.00 4.42
551 552 1.071699 CTCTCCTCTCCTCCTCCTACG 59.928 61.905 0.00 0.00 0.00 3.51
552 553 2.372172 CTCTCTCCTCTCCTCCTCCTAC 59.628 59.091 0.00 0.00 0.00 3.18
553 554 2.021441 ACTCTCTCCTCTCCTCCTCCTA 60.021 54.545 0.00 0.00 0.00 2.94
554 555 1.275002 ACTCTCTCCTCTCCTCCTCCT 60.275 57.143 0.00 0.00 0.00 3.69
555 556 1.133792 CACTCTCTCCTCTCCTCCTCC 60.134 61.905 0.00 0.00 0.00 4.30
556 557 1.750682 GCACTCTCTCCTCTCCTCCTC 60.751 61.905 0.00 0.00 0.00 3.71
557 558 0.258774 GCACTCTCTCCTCTCCTCCT 59.741 60.000 0.00 0.00 0.00 3.69
558 559 1.101049 CGCACTCTCTCCTCTCCTCC 61.101 65.000 0.00 0.00 0.00 4.30
559 560 1.101049 CCGCACTCTCTCCTCTCCTC 61.101 65.000 0.00 0.00 0.00 3.71
560 561 1.077068 CCGCACTCTCTCCTCTCCT 60.077 63.158 0.00 0.00 0.00 3.69
561 562 2.781158 GCCGCACTCTCTCCTCTCC 61.781 68.421 0.00 0.00 0.00 3.71
562 563 2.804856 GCCGCACTCTCTCCTCTC 59.195 66.667 0.00 0.00 0.00 3.20
563 564 3.137459 CGCCGCACTCTCTCCTCT 61.137 66.667 0.00 0.00 0.00 3.69
564 565 4.863925 GCGCCGCACTCTCTCCTC 62.864 72.222 3.15 0.00 0.00 3.71
582 583 3.918220 CGGCACATTCGAGCGCTC 61.918 66.667 27.64 27.64 0.00 5.03
611 612 3.206957 GGTGTATTTCGGGCGCCC 61.207 66.667 36.69 36.69 0.00 6.13
612 613 3.569690 CGGTGTATTTCGGGCGCC 61.570 66.667 21.18 21.18 0.00 6.53
613 614 4.232248 GCGGTGTATTTCGGGCGC 62.232 66.667 0.00 0.00 0.00 6.53
614 615 3.920553 CGCGGTGTATTTCGGGCG 61.921 66.667 0.00 0.00 37.56 6.13
615 616 2.816520 ACGCGGTGTATTTCGGGC 60.817 61.111 12.47 0.00 41.90 6.13
616 617 2.457778 CCACGCGGTGTATTTCGGG 61.458 63.158 12.47 0.00 43.41 5.14
617 618 2.457778 CCCACGCGGTGTATTTCGG 61.458 63.158 12.47 0.00 0.00 4.30
618 619 0.808453 ATCCCACGCGGTGTATTTCG 60.808 55.000 12.47 0.00 0.00 3.46
619 620 2.132762 CTATCCCACGCGGTGTATTTC 58.867 52.381 12.47 0.00 0.00 2.17
620 621 1.483415 ACTATCCCACGCGGTGTATTT 59.517 47.619 12.47 0.00 0.00 1.40
621 622 1.117150 ACTATCCCACGCGGTGTATT 58.883 50.000 12.47 0.00 0.00 1.89
622 623 0.387929 CACTATCCCACGCGGTGTAT 59.612 55.000 12.47 0.87 0.00 2.29
623 624 1.811195 CACTATCCCACGCGGTGTA 59.189 57.895 12.47 0.00 0.00 2.90
624 625 2.577059 CACTATCCCACGCGGTGT 59.423 61.111 12.47 0.00 0.00 4.16
625 626 2.852495 AAGCACTATCCCACGCGGTG 62.852 60.000 12.47 8.13 0.00 4.94
626 627 2.573609 GAAGCACTATCCCACGCGGT 62.574 60.000 12.47 0.00 0.00 5.68
627 628 1.883084 GAAGCACTATCCCACGCGG 60.883 63.158 12.47 0.00 0.00 6.46
628 629 1.883084 GGAAGCACTATCCCACGCG 60.883 63.158 3.53 3.53 0.00 6.01
629 630 1.883084 CGGAAGCACTATCCCACGC 60.883 63.158 0.00 0.00 33.13 5.34
630 631 0.527817 GTCGGAAGCACTATCCCACG 60.528 60.000 0.00 0.00 33.13 4.94
631 632 0.179081 GGTCGGAAGCACTATCCCAC 60.179 60.000 0.00 0.00 33.13 4.61
632 633 1.672854 CGGTCGGAAGCACTATCCCA 61.673 60.000 0.00 0.00 33.13 4.37
633 634 1.067582 CGGTCGGAAGCACTATCCC 59.932 63.158 0.00 0.00 33.13 3.85
634 635 0.527817 CACGGTCGGAAGCACTATCC 60.528 60.000 0.00 0.00 0.00 2.59
635 636 1.146358 GCACGGTCGGAAGCACTATC 61.146 60.000 0.00 0.00 0.00 2.08
636 637 1.153628 GCACGGTCGGAAGCACTAT 60.154 57.895 0.00 0.00 0.00 2.12
637 638 2.260434 GCACGGTCGGAAGCACTA 59.740 61.111 0.00 0.00 0.00 2.74
642 643 3.636313 TTAGGCGCACGGTCGGAAG 62.636 63.158 10.83 0.00 0.00 3.46
643 644 3.682885 TTAGGCGCACGGTCGGAA 61.683 61.111 10.83 0.00 0.00 4.30
644 645 4.424566 GTTAGGCGCACGGTCGGA 62.425 66.667 10.83 0.00 0.00 4.55
645 646 4.430765 AGTTAGGCGCACGGTCGG 62.431 66.667 10.83 0.00 0.00 4.79
646 647 2.879462 GAGTTAGGCGCACGGTCG 60.879 66.667 10.83 0.00 0.00 4.79
647 648 2.879462 CGAGTTAGGCGCACGGTC 60.879 66.667 10.83 0.00 0.00 4.79
648 649 1.865788 TAACGAGTTAGGCGCACGGT 61.866 55.000 10.83 5.94 0.00 4.83
649 650 0.526954 ATAACGAGTTAGGCGCACGG 60.527 55.000 10.83 0.00 0.00 4.94
650 651 2.041966 CTATAACGAGTTAGGCGCACG 58.958 52.381 10.83 7.24 0.00 5.34
651 652 3.298317 CTCTATAACGAGTTAGGCGCAC 58.702 50.000 10.83 0.00 0.00 5.34
652 653 2.287427 GCTCTATAACGAGTTAGGCGCA 60.287 50.000 10.83 0.00 33.55 6.09
653 654 2.317684 GCTCTATAACGAGTTAGGCGC 58.682 52.381 0.00 0.00 33.55 6.53
654 655 2.572243 CGCTCTATAACGAGTTAGGCG 58.428 52.381 14.94 14.94 33.55 5.52
655 656 2.317684 GCGCTCTATAACGAGTTAGGC 58.682 52.381 0.00 3.43 33.55 3.93
656 657 2.572243 CGCGCTCTATAACGAGTTAGG 58.428 52.381 5.56 0.00 33.55 2.69
657 658 1.970608 GCGCGCTCTATAACGAGTTAG 59.029 52.381 26.67 0.00 33.55 2.34
658 659 1.658373 CGCGCGCTCTATAACGAGTTA 60.658 52.381 30.48 0.00 33.55 2.24
659 660 0.928908 CGCGCGCTCTATAACGAGTT 60.929 55.000 30.48 0.00 33.55 3.01
660 661 1.368969 CGCGCGCTCTATAACGAGT 60.369 57.895 30.48 0.00 33.55 4.18
661 662 2.698432 GCGCGCGCTCTATAACGAG 61.698 63.158 44.38 10.35 38.26 4.18
662 663 2.724721 GCGCGCGCTCTATAACGA 60.725 61.111 44.38 0.00 38.26 3.85
718 719 1.346378 TAGTCCGTTTTAGCGTGCGC 61.346 55.000 8.67 8.67 42.33 6.09
719 720 1.062258 TTAGTCCGTTTTAGCGTGCG 58.938 50.000 0.00 0.00 0.00 5.34
720 721 3.734776 AATTAGTCCGTTTTAGCGTGC 57.265 42.857 0.00 0.00 0.00 5.34
721 722 5.242877 CGTAAATTAGTCCGTTTTAGCGTG 58.757 41.667 0.00 0.00 0.00 5.34
722 723 4.327087 CCGTAAATTAGTCCGTTTTAGCGT 59.673 41.667 0.00 0.00 0.00 5.07
723 724 4.780013 GCCGTAAATTAGTCCGTTTTAGCG 60.780 45.833 0.00 0.00 0.00 4.26
724 725 4.581493 GCCGTAAATTAGTCCGTTTTAGC 58.419 43.478 0.00 0.00 0.00 3.09
725 726 4.780013 GCGCCGTAAATTAGTCCGTTTTAG 60.780 45.833 0.00 0.00 0.00 1.85
726 727 3.061965 GCGCCGTAAATTAGTCCGTTTTA 59.938 43.478 0.00 0.00 0.00 1.52
727 728 2.159667 GCGCCGTAAATTAGTCCGTTTT 60.160 45.455 0.00 0.00 0.00 2.43
728 729 1.394572 GCGCCGTAAATTAGTCCGTTT 59.605 47.619 0.00 0.00 0.00 3.60
729 730 1.001624 GCGCCGTAAATTAGTCCGTT 58.998 50.000 0.00 0.00 0.00 4.44
730 731 1.141591 CGCGCCGTAAATTAGTCCGT 61.142 55.000 0.00 0.00 0.00 4.69
731 732 1.556484 CGCGCCGTAAATTAGTCCG 59.444 57.895 0.00 0.00 0.00 4.79
732 733 1.929376 CCGCGCCGTAAATTAGTCC 59.071 57.895 0.00 0.00 0.00 3.85
733 734 1.274770 GCCGCGCCGTAAATTAGTC 59.725 57.895 0.00 0.00 0.00 2.59
734 735 2.519175 CGCCGCGCCGTAAATTAGT 61.519 57.895 0.00 0.00 0.00 2.24
735 736 2.244382 CGCCGCGCCGTAAATTAG 59.756 61.111 0.00 0.00 0.00 1.73
753 754 0.370273 CAACAGCCGCGCTAAACTAG 59.630 55.000 5.56 0.00 36.40 2.57
754 755 1.017177 CCAACAGCCGCGCTAAACTA 61.017 55.000 5.56 0.00 36.40 2.24
755 756 2.325082 CCAACAGCCGCGCTAAACT 61.325 57.895 5.56 0.00 36.40 2.66
756 757 2.175811 CCAACAGCCGCGCTAAAC 59.824 61.111 5.56 0.00 36.40 2.01
757 758 2.031314 TCCAACAGCCGCGCTAAA 59.969 55.556 5.56 0.00 36.40 1.85
758 759 2.238847 ATCTCCAACAGCCGCGCTAA 62.239 55.000 5.56 0.00 36.40 3.09
759 760 2.721167 ATCTCCAACAGCCGCGCTA 61.721 57.895 5.56 0.00 36.40 4.26
760 761 4.087892 ATCTCCAACAGCCGCGCT 62.088 61.111 5.56 0.00 40.77 5.92
761 762 3.869272 CATCTCCAACAGCCGCGC 61.869 66.667 0.00 0.00 0.00 6.86
762 763 3.869272 GCATCTCCAACAGCCGCG 61.869 66.667 0.00 0.00 0.00 6.46
763 764 2.437359 AGCATCTCCAACAGCCGC 60.437 61.111 0.00 0.00 0.00 6.53
764 765 3.805267 GAGCATCTCCAACAGCCG 58.195 61.111 0.00 0.00 0.00 5.52
772 773 5.942744 TCAGCACTGAGTAAGAGCATCTCC 61.943 50.000 0.00 0.00 44.23 3.71
773 774 3.130164 TCAGCACTGAGTAAGAGCATCTC 59.870 47.826 0.00 0.00 44.23 2.75
774 775 3.095332 TCAGCACTGAGTAAGAGCATCT 58.905 45.455 0.00 0.00 44.23 2.90
775 776 3.186119 GTCAGCACTGAGTAAGAGCATC 58.814 50.000 0.00 0.00 44.23 3.91
776 777 2.564504 TGTCAGCACTGAGTAAGAGCAT 59.435 45.455 0.00 0.00 44.23 3.79
777 778 1.963515 TGTCAGCACTGAGTAAGAGCA 59.036 47.619 0.00 0.00 44.23 4.26
778 779 2.333014 GTGTCAGCACTGAGTAAGAGC 58.667 52.381 0.00 0.00 42.32 4.09
779 780 2.030717 ACGTGTCAGCACTGAGTAAGAG 60.031 50.000 0.00 0.00 43.16 2.85
780 781 1.954382 ACGTGTCAGCACTGAGTAAGA 59.046 47.619 0.00 0.00 43.16 2.10
781 782 2.423926 ACGTGTCAGCACTGAGTAAG 57.576 50.000 0.00 0.00 43.16 2.34
782 783 3.058432 GTCTACGTGTCAGCACTGAGTAA 60.058 47.826 0.00 0.00 43.16 2.24
783 784 2.483106 GTCTACGTGTCAGCACTGAGTA 59.517 50.000 0.00 0.00 43.16 2.59
784 785 1.267261 GTCTACGTGTCAGCACTGAGT 59.733 52.381 0.00 0.00 43.16 3.41
822 823 4.309950 AGCGACGTGGTTGGGGAC 62.310 66.667 0.00 0.00 0.00 4.46
823 824 3.998672 GAGCGACGTGGTTGGGGA 61.999 66.667 0.00 0.00 0.00 4.81
846 855 3.917380 GTCTGACAAGTCAAGTGATCTCG 59.083 47.826 2.24 0.00 39.39 4.04
903 927 2.670148 GGTGTGCCGAGGGGAAGAT 61.670 63.158 0.00 0.00 34.06 2.40
920 944 3.437049 GGAACGGTGAAGAAATCTGAAGG 59.563 47.826 0.00 0.00 0.00 3.46
972 996 1.055040 CCTCTGCCCTGCTAGCTAAT 58.945 55.000 17.23 0.00 0.00 1.73
1082 1107 2.291605 TGTCGATGAGGAAGGAGGAGAA 60.292 50.000 0.00 0.00 0.00 2.87
1330 1360 1.602237 GATCCGTGCTGGGAAGGAA 59.398 57.895 0.96 0.00 40.09 3.36
1374 1404 3.519930 GGGAGGACGAGGACGAGC 61.520 72.222 0.00 0.00 42.66 5.03
1558 1588 1.078759 CGTACTGGAAAGCTCTGCCG 61.079 60.000 0.00 0.00 0.00 5.69
1631 1661 0.259356 CCCTCTAACCCTCTCTCCGT 59.741 60.000 0.00 0.00 0.00 4.69
1633 1663 1.110518 CGCCCTCTAACCCTCTCTCC 61.111 65.000 0.00 0.00 0.00 3.71
1637 1667 2.041819 CCCGCCCTCTAACCCTCT 60.042 66.667 0.00 0.00 0.00 3.69
1691 1721 2.579684 ATTCCGAGGACGAAGCTGCC 62.580 60.000 0.00 0.00 42.66 4.85
1692 1722 0.741221 AATTCCGAGGACGAAGCTGC 60.741 55.000 0.00 0.00 42.66 5.25
1695 1725 4.143094 GCATAATAATTCCGAGGACGAAGC 60.143 45.833 0.00 0.00 42.66 3.86
1702 1732 3.684305 TGATGCGCATAATAATTCCGAGG 59.316 43.478 25.40 0.00 0.00 4.63
1712 1742 1.788258 CTCTCCGTGATGCGCATAAT 58.212 50.000 25.40 0.84 39.71 1.28
1714 1744 1.300156 GCTCTCCGTGATGCGCATA 60.300 57.895 25.40 6.20 39.71 3.14
1721 1751 2.885861 GTCCGTGCTCTCCGTGAT 59.114 61.111 0.00 0.00 0.00 3.06
1781 1811 2.370445 CGGGCTTCAGATCAGGGGT 61.370 63.158 0.00 0.00 0.00 4.95
1804 1834 1.737735 CTCTTGCGTGGCGACATCA 60.738 57.895 0.00 0.00 46.14 3.07
1858 1888 0.245539 CGGTAGAGGCAAGAAACGGA 59.754 55.000 0.00 0.00 0.00 4.69
1930 1960 0.820891 CTCCTTTGCAGCACAGTGGT 60.821 55.000 7.78 0.00 0.00 4.16
1982 2021 0.244721 GGTTCTGGAAATGCACCTGC 59.755 55.000 0.00 0.00 42.50 4.85
1987 2026 0.109532 TCACCGGTTCTGGAAATGCA 59.890 50.000 2.97 0.00 0.00 3.96
1999 2038 2.225491 CACGAACAATTTGATCACCGGT 59.775 45.455 0.00 0.00 0.00 5.28
2088 2133 1.824230 GCAGGCCATTACCAACATCAA 59.176 47.619 5.01 0.00 0.00 2.57
2143 2188 0.977108 CTCCAGAAGGCAGCTCCTCT 60.977 60.000 5.34 3.00 46.94 3.69
2197 2242 1.599047 CCAGACCTGCTCATTCCGT 59.401 57.895 0.00 0.00 0.00 4.69
2316 2392 1.905215 CAGACCTCCAGAACACCTCAT 59.095 52.381 0.00 0.00 0.00 2.90
2356 2432 4.514577 CCGGGCTTCTCGACGCAT 62.515 66.667 0.00 0.00 0.00 4.73
2421 2497 4.660789 AATGCTGTTGTTCAAGAAAGCT 57.339 36.364 12.60 0.00 0.00 3.74
2465 2541 9.331282 ACCATGCTTAAACTTTATCTCTCATAC 57.669 33.333 0.00 0.00 0.00 2.39
2537 4581 4.695217 TTCCAATAAACTGAATGTCGGC 57.305 40.909 0.00 0.00 0.00 5.54
2541 4585 7.397192 AGCTTACCATTCCAATAAACTGAATGT 59.603 33.333 9.74 2.80 42.30 2.71
2567 6078 2.513753 CACCAACATTAGTTCAGGCCA 58.486 47.619 5.01 0.00 35.28 5.36
2615 6126 6.826741 ACTAACCAGAGCAAAACTTGACTTTA 59.173 34.615 0.00 0.00 0.00 1.85
2632 6143 3.250040 CACGGTTTTGGAAGACTAACCAG 59.750 47.826 0.00 0.00 39.98 4.00
2639 6150 1.064952 CCACACACGGTTTTGGAAGAC 59.935 52.381 0.00 0.00 0.00 3.01
2654 6165 0.244994 AGACGATCAGCAGTCCACAC 59.755 55.000 0.00 0.00 38.08 3.82
2665 6176 0.390492 CCATAGCAGCCAGACGATCA 59.610 55.000 0.00 0.00 0.00 2.92
2682 6193 0.970937 GTCCGAGTGAGGTCATCCCA 60.971 60.000 0.00 0.00 34.66 4.37
2689 6200 3.374402 CAGCGGTCCGAGTGAGGT 61.374 66.667 17.49 0.00 0.00 3.85
2700 6211 4.320456 CACAGAGGGTGCAGCGGT 62.320 66.667 10.24 0.00 41.36 5.68
2734 6245 0.532862 CCAAGATTAGGTGCGCCGAT 60.533 55.000 11.42 9.35 40.50 4.18
2735 6246 1.153449 CCAAGATTAGGTGCGCCGA 60.153 57.895 11.42 1.77 40.50 5.54
2758 6269 2.029470 CCAGATAGCCGGAGAGAATGAC 60.029 54.545 5.05 0.00 0.00 3.06
2761 6272 1.133009 ACCCAGATAGCCGGAGAGAAT 60.133 52.381 5.05 0.00 0.00 2.40
2767 7068 2.742116 GGCAACCCAGATAGCCGGA 61.742 63.158 5.05 0.00 37.41 5.14
2768 7069 2.203209 GGCAACCCAGATAGCCGG 60.203 66.667 0.00 0.00 37.41 6.13
2823 7125 2.252072 AATAAGCGAGCGAGGCCCAA 62.252 55.000 0.00 0.00 0.00 4.12
2959 7262 0.749454 ATGCCAAGGTGCGAATCCTC 60.749 55.000 0.00 0.00 33.76 3.71
2989 7292 3.168528 AGCACGAACAGGGGTGGT 61.169 61.111 0.00 0.00 39.81 4.16
3028 7331 3.676742 CGACTACTCGCGGAAAGC 58.323 61.111 6.13 0.00 43.95 3.51
3065 7368 8.047310 ACAAAACAAGAGAGAAAAGTAGAAGGA 58.953 33.333 0.00 0.00 0.00 3.36
3086 7389 5.468746 CGTCAGGGAGAGAATAACAACAAAA 59.531 40.000 0.00 0.00 0.00 2.44
3089 7392 3.830178 TCGTCAGGGAGAGAATAACAACA 59.170 43.478 0.00 0.00 0.00 3.33
3126 7429 6.800072 ATTGGAGTAGAAAGGAGGAGTAAG 57.200 41.667 0.00 0.00 0.00 2.34
3128 7431 8.065627 TCAATATTGGAGTAGAAAGGAGGAGTA 58.934 37.037 15.36 0.00 0.00 2.59
3130 7433 7.366847 TCAATATTGGAGTAGAAAGGAGGAG 57.633 40.000 15.36 0.00 0.00 3.69
3147 7450 5.884792 CAGGAGTCTCTGCCTTTTCAATATT 59.115 40.000 0.00 0.00 30.41 1.28
3216 7519 5.447279 GCGATGGTGTTAATTACTTCACTGG 60.447 44.000 11.68 1.22 0.00 4.00
3231 7534 1.886886 AAAAAGTACGGCGATGGTGT 58.113 45.000 16.62 0.00 0.00 4.16
3254 7557 7.201478 CGCCATGTTACTTCAAAGTTTCAAAAA 60.201 33.333 0.00 0.00 40.37 1.94
3255 7558 6.254589 CGCCATGTTACTTCAAAGTTTCAAAA 59.745 34.615 0.00 0.00 40.37 2.44
3256 7559 5.746245 CGCCATGTTACTTCAAAGTTTCAAA 59.254 36.000 0.00 0.00 40.37 2.69
3257 7560 5.066634 TCGCCATGTTACTTCAAAGTTTCAA 59.933 36.000 0.00 0.00 40.37 2.69
3258 7561 4.576873 TCGCCATGTTACTTCAAAGTTTCA 59.423 37.500 0.00 2.13 40.37 2.69
3259 7562 5.103290 TCGCCATGTTACTTCAAAGTTTC 57.897 39.130 0.00 0.00 40.37 2.78
3260 7563 5.705609 ATCGCCATGTTACTTCAAAGTTT 57.294 34.783 0.00 0.00 40.37 2.66
3261 7564 6.183360 CCATATCGCCATGTTACTTCAAAGTT 60.183 38.462 0.00 0.00 40.37 2.66
3290 7593 4.331992 TCAACTTATCTCTCTACACGGTCG 59.668 45.833 0.00 0.00 0.00 4.79
3294 7597 6.137794 ACCATCAACTTATCTCTCTACACG 57.862 41.667 0.00 0.00 0.00 4.49
3318 7621 9.604626 CGTTATACTAGTAAACTTAGGATTCCG 57.395 37.037 6.70 0.00 0.00 4.30
3324 7627 6.145535 CGGGCGTTATACTAGTAAACTTAGG 58.854 44.000 6.70 2.62 0.00 2.69
3352 7655 1.305201 TTTGAAGAGCCCGTGACAAC 58.695 50.000 0.00 0.00 0.00 3.32
3353 7656 2.045561 TTTTGAAGAGCCCGTGACAA 57.954 45.000 0.00 0.00 0.00 3.18
3354 7657 2.270352 ATTTTGAAGAGCCCGTGACA 57.730 45.000 0.00 0.00 0.00 3.58
3355 7658 3.643159 AAATTTTGAAGAGCCCGTGAC 57.357 42.857 0.00 0.00 0.00 3.67
3356 7659 7.338196 TGATTATAAATTTTGAAGAGCCCGTGA 59.662 33.333 0.00 0.00 0.00 4.35
3357 7660 7.479980 TGATTATAAATTTTGAAGAGCCCGTG 58.520 34.615 0.00 0.00 0.00 4.94
3358 7661 7.339466 ACTGATTATAAATTTTGAAGAGCCCGT 59.661 33.333 0.00 0.00 0.00 5.28
3359 7662 7.707104 ACTGATTATAAATTTTGAAGAGCCCG 58.293 34.615 0.00 0.00 0.00 6.13
3378 7681 9.525826 GGGGATGATAAATGAAAGATACTGATT 57.474 33.333 0.00 0.00 0.00 2.57
3379 7682 8.898728 AGGGGATGATAAATGAAAGATACTGAT 58.101 33.333 0.00 0.00 0.00 2.90
3380 7683 8.280258 AGGGGATGATAAATGAAAGATACTGA 57.720 34.615 0.00 0.00 0.00 3.41
3381 7684 8.159447 TGAGGGGATGATAAATGAAAGATACTG 58.841 37.037 0.00 0.00 0.00 2.74
3382 7685 8.280258 TGAGGGGATGATAAATGAAAGATACT 57.720 34.615 0.00 0.00 0.00 2.12
3386 7689 9.524496 CAATATGAGGGGATGATAAATGAAAGA 57.476 33.333 0.00 0.00 0.00 2.52
3387 7690 8.746530 CCAATATGAGGGGATGATAAATGAAAG 58.253 37.037 0.00 0.00 0.00 2.62
3388 7691 8.654485 CCAATATGAGGGGATGATAAATGAAA 57.346 34.615 0.00 0.00 0.00 2.69
3403 7706 4.044571 ACCCCATAATCACCCAATATGAGG 59.955 45.833 0.00 0.00 32.80 3.86
3404 7707 5.012239 CACCCCATAATCACCCAATATGAG 58.988 45.833 0.00 0.00 30.32 2.90
3405 7708 4.752590 GCACCCCATAATCACCCAATATGA 60.753 45.833 0.00 0.00 30.32 2.15
3406 7709 3.511146 GCACCCCATAATCACCCAATATG 59.489 47.826 0.00 0.00 0.00 1.78
3407 7710 3.402366 AGCACCCCATAATCACCCAATAT 59.598 43.478 0.00 0.00 0.00 1.28
3408 7711 2.788807 AGCACCCCATAATCACCCAATA 59.211 45.455 0.00 0.00 0.00 1.90
3409 7712 1.575304 AGCACCCCATAATCACCCAAT 59.425 47.619 0.00 0.00 0.00 3.16
3410 7713 1.006813 AGCACCCCATAATCACCCAA 58.993 50.000 0.00 0.00 0.00 4.12
3411 7714 0.550914 GAGCACCCCATAATCACCCA 59.449 55.000 0.00 0.00 0.00 4.51
3412 7715 0.846693 AGAGCACCCCATAATCACCC 59.153 55.000 0.00 0.00 0.00 4.61
3413 7716 3.857157 TTAGAGCACCCCATAATCACC 57.143 47.619 0.00 0.00 0.00 4.02
3414 7717 7.817418 TTTAATTAGAGCACCCCATAATCAC 57.183 36.000 0.00 0.00 0.00 3.06
3415 7718 8.691797 GTTTTTAATTAGAGCACCCCATAATCA 58.308 33.333 0.00 0.00 0.00 2.57
3416 7719 8.691797 TGTTTTTAATTAGAGCACCCCATAATC 58.308 33.333 0.00 0.00 0.00 1.75
3417 7720 8.474831 GTGTTTTTAATTAGAGCACCCCATAAT 58.525 33.333 6.63 0.00 0.00 1.28
3418 7721 7.451877 TGTGTTTTTAATTAGAGCACCCCATAA 59.548 33.333 12.20 0.00 0.00 1.90
3419 7722 6.948886 TGTGTTTTTAATTAGAGCACCCCATA 59.051 34.615 12.20 0.00 0.00 2.74
3420 7723 5.777732 TGTGTTTTTAATTAGAGCACCCCAT 59.222 36.000 12.20 0.00 0.00 4.00
3421 7724 5.141182 TGTGTTTTTAATTAGAGCACCCCA 58.859 37.500 12.20 0.00 0.00 4.96
3422 7725 5.715434 TGTGTTTTTAATTAGAGCACCCC 57.285 39.130 12.20 0.00 0.00 4.95
3423 7726 6.508777 TGTTGTGTTTTTAATTAGAGCACCC 58.491 36.000 12.20 6.60 0.00 4.61
3424 7727 7.995463 TTGTTGTGTTTTTAATTAGAGCACC 57.005 32.000 12.20 3.29 0.00 5.01
3425 7728 9.243637 TGATTGTTGTGTTTTTAATTAGAGCAC 57.756 29.630 9.48 9.48 0.00 4.40
3426 7729 9.809096 TTGATTGTTGTGTTTTTAATTAGAGCA 57.191 25.926 0.00 0.00 0.00 4.26


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.