Multiple sequence alignment - TraesCS2B01G319900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G319900 chr2B 100.000 2474 0 0 1 2474 456032195 456034668 0.000000e+00 4569
1 TraesCS2B01G319900 chr2B 91.635 1817 108 20 1 1784 777365838 777367643 0.000000e+00 2473
2 TraesCS2B01G319900 chr2B 87.097 1953 193 28 1 1909 479890201 479888264 0.000000e+00 2156
3 TraesCS2B01G319900 chr2B 85.174 1032 105 19 900 1910 783932662 783931658 0.000000e+00 1014
4 TraesCS2B01G319900 chr6B 90.918 1949 129 28 1 1908 313315287 313313346 0.000000e+00 2575
5 TraesCS2B01G319900 chr4A 90.454 1938 139 20 1 1909 743365939 743364019 0.000000e+00 2512
6 TraesCS2B01G319900 chr4A 90.476 105 10 0 2000 2104 598115990 598115886 3.320000e-29 139
7 TraesCS2B01G319900 chr5B 91.851 1804 106 20 135 1910 616369692 616371482 0.000000e+00 2479
8 TraesCS2B01G319900 chr5B 85.780 1955 202 41 1 1909 477756199 477758123 0.000000e+00 2001
9 TraesCS2B01G319900 chr5B 78.309 272 27 15 2136 2375 696958972 696958701 1.980000e-31 147
10 TraesCS2B01G319900 chr3D 89.182 1969 135 38 1 1909 81833146 81835096 0.000000e+00 2385
11 TraesCS2B01G319900 chr3D 85.619 1954 186 58 1 1909 6531151 6529248 0.000000e+00 1964
12 TraesCS2B01G319900 chr3D 91.766 1263 76 8 668 1909 6288084 6289339 0.000000e+00 1731
13 TraesCS2B01G319900 chr3D 77.023 309 36 12 2100 2373 352393902 352394210 7.130000e-31 145
14 TraesCS2B01G319900 chr3D 76.797 306 36 13 2102 2372 404444123 404444428 3.320000e-29 139
15 TraesCS2B01G319900 chr3D 80.749 187 16 11 2205 2372 434709225 434709040 7.180000e-26 128
16 TraesCS2B01G319900 chr3D 78.142 183 29 6 2200 2373 63403949 63403769 3.360000e-19 106
17 TraesCS2B01G319900 chr6D 88.178 1861 157 28 1 1818 305745143 305746983 0.000000e+00 2159
18 TraesCS2B01G319900 chr6D 89.111 1754 136 22 188 1909 446604659 446602929 0.000000e+00 2130
19 TraesCS2B01G319900 chr1D 86.977 1958 170 36 1 1910 369900335 369902255 0.000000e+00 2124
20 TraesCS2B01G319900 chr1D 79.734 301 38 14 4 301 318546953 318546673 1.940000e-46 196
21 TraesCS2B01G319900 chr3B 85.729 1934 198 34 1 1883 598917307 598919213 0.000000e+00 1971
22 TraesCS2B01G319900 chr3B 85.015 1962 188 48 1 1909 478551155 478549247 0.000000e+00 1897
23 TraesCS2B01G319900 chr3B 84.302 172 26 1 1735 1905 771410635 771410464 1.520000e-37 167
24 TraesCS2B01G319900 chr3B 77.705 305 33 9 2103 2372 151218563 151218867 1.180000e-33 154
25 TraesCS2B01G319900 chr2D 87.507 1753 152 28 188 1910 647091204 647089489 0.000000e+00 1962
26 TraesCS2B01G319900 chr2D 88.123 1625 143 22 298 1910 646863492 646861906 0.000000e+00 1886
27 TraesCS2B01G319900 chr2D 81.379 290 27 10 2103 2366 247787009 247787297 6.930000e-51 211
28 TraesCS2B01G319900 chr2D 79.167 312 29 9 2100 2375 13622960 13623271 1.510000e-42 183
29 TraesCS2B01G319900 chr2D 78.095 315 31 15 2102 2378 494637382 494637068 5.470000e-37 165
30 TraesCS2B01G319900 chr7B 90.140 1501 106 13 3 1472 729604364 729602875 0.000000e+00 1914
31 TraesCS2B01G319900 chr7B 90.323 899 53 13 1 865 602018377 602017479 0.000000e+00 1147
32 TraesCS2B01G319900 chr7B 83.381 1059 104 27 1 1018 577165342 577164315 0.000000e+00 915
33 TraesCS2B01G319900 chr7B 89.565 690 39 15 105 769 133882393 133881712 0.000000e+00 845
34 TraesCS2B01G319900 chr7B 81.250 208 23 4 2103 2294 3391461 3391254 1.180000e-33 154
35 TraesCS2B01G319900 chr4B 91.695 1192 67 6 723 1907 541446475 541447641 0.000000e+00 1624
36 TraesCS2B01G319900 chr4B 87.429 700 60 15 1 672 541445775 541446474 0.000000e+00 780
37 TraesCS2B01G319900 chr4B 77.049 305 35 9 2103 2372 188201095 188201399 2.560000e-30 143
38 TraesCS2B01G319900 chr7D 87.230 556 61 8 1343 1891 121215538 121214986 2.090000e-175 625
39 TraesCS2B01G319900 chr7D 83.165 297 24 11 2103 2375 85937374 85937080 5.280000e-62 248
40 TraesCS2B01G319900 chr7D 81.090 312 24 12 2099 2376 517004064 517003754 1.490000e-52 217
41 TraesCS2B01G319900 chr1B 89.631 434 41 4 1478 1909 684578734 684579165 1.290000e-152 549
42 TraesCS2B01G319900 chr1B 83.438 634 50 21 1 590 602893572 602894194 2.800000e-149 538
43 TraesCS2B01G319900 chr1B 92.473 93 6 1 2202 2294 516963381 516963472 5.550000e-27 132
44 TraesCS2B01G319900 chr4D 82.951 305 18 10 2102 2372 421335518 421335214 6.830000e-61 244
45 TraesCS2B01G319900 chr4D 80.592 304 26 14 2103 2373 205755071 205755374 1.160000e-48 204
46 TraesCS2B01G319900 chr5D 81.639 305 20 12 2103 2372 267851826 267851523 1.150000e-53 220
47 TraesCS2B01G319900 chrUn 80.065 306 26 11 2102 2372 289820614 289820919 6.980000e-46 195
48 TraesCS2B01G319900 chrUn 83.173 208 18 4 2100 2290 461637727 461637520 9.090000e-40 174
49 TraesCS2B01G319900 chr2A 80.065 306 24 12 2103 2372 434863786 434863482 2.510000e-45 193
50 TraesCS2B01G319900 chr2A 78.864 317 30 13 2101 2381 223718917 223718602 1.950000e-41 180
51 TraesCS2B01G319900 chr2A 78.413 315 28 15 2099 2375 57446601 57446289 4.230000e-38 169
52 TraesCS2B01G319900 chr2A 87.640 89 9 2 2202 2289 83859932 83860019 4.350000e-18 102
53 TraesCS2B01G319900 chr1A 78.502 307 30 17 2102 2373 542694853 542695158 4.230000e-38 169
54 TraesCS2B01G319900 chr5A 77.632 304 34 14 2103 2372 6676267 6675964 1.180000e-33 154
55 TraesCS2B01G319900 chr6A 77.273 308 30 18 2103 2372 521472874 521473179 7.130000e-31 145
56 TraesCS2B01G319900 chr3A 80.905 199 20 10 2209 2389 11959766 11959568 9.220000e-30 141


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G319900 chr2B 456032195 456034668 2473 False 4569 4569 100.000 1 2474 1 chr2B.!!$F1 2473
1 TraesCS2B01G319900 chr2B 777365838 777367643 1805 False 2473 2473 91.635 1 1784 1 chr2B.!!$F2 1783
2 TraesCS2B01G319900 chr2B 479888264 479890201 1937 True 2156 2156 87.097 1 1909 1 chr2B.!!$R1 1908
3 TraesCS2B01G319900 chr2B 783931658 783932662 1004 True 1014 1014 85.174 900 1910 1 chr2B.!!$R2 1010
4 TraesCS2B01G319900 chr6B 313313346 313315287 1941 True 2575 2575 90.918 1 1908 1 chr6B.!!$R1 1907
5 TraesCS2B01G319900 chr4A 743364019 743365939 1920 True 2512 2512 90.454 1 1909 1 chr4A.!!$R2 1908
6 TraesCS2B01G319900 chr5B 616369692 616371482 1790 False 2479 2479 91.851 135 1910 1 chr5B.!!$F2 1775
7 TraesCS2B01G319900 chr5B 477756199 477758123 1924 False 2001 2001 85.780 1 1909 1 chr5B.!!$F1 1908
8 TraesCS2B01G319900 chr3D 81833146 81835096 1950 False 2385 2385 89.182 1 1909 1 chr3D.!!$F2 1908
9 TraesCS2B01G319900 chr3D 6529248 6531151 1903 True 1964 1964 85.619 1 1909 1 chr3D.!!$R1 1908
10 TraesCS2B01G319900 chr3D 6288084 6289339 1255 False 1731 1731 91.766 668 1909 1 chr3D.!!$F1 1241
11 TraesCS2B01G319900 chr6D 305745143 305746983 1840 False 2159 2159 88.178 1 1818 1 chr6D.!!$F1 1817
12 TraesCS2B01G319900 chr6D 446602929 446604659 1730 True 2130 2130 89.111 188 1909 1 chr6D.!!$R1 1721
13 TraesCS2B01G319900 chr1D 369900335 369902255 1920 False 2124 2124 86.977 1 1910 1 chr1D.!!$F1 1909
14 TraesCS2B01G319900 chr3B 598917307 598919213 1906 False 1971 1971 85.729 1 1883 1 chr3B.!!$F2 1882
15 TraesCS2B01G319900 chr3B 478549247 478551155 1908 True 1897 1897 85.015 1 1909 1 chr3B.!!$R1 1908
16 TraesCS2B01G319900 chr2D 647089489 647091204 1715 True 1962 1962 87.507 188 1910 1 chr2D.!!$R3 1722
17 TraesCS2B01G319900 chr2D 646861906 646863492 1586 True 1886 1886 88.123 298 1910 1 chr2D.!!$R2 1612
18 TraesCS2B01G319900 chr7B 729602875 729604364 1489 True 1914 1914 90.140 3 1472 1 chr7B.!!$R5 1469
19 TraesCS2B01G319900 chr7B 602017479 602018377 898 True 1147 1147 90.323 1 865 1 chr7B.!!$R4 864
20 TraesCS2B01G319900 chr7B 577164315 577165342 1027 True 915 915 83.381 1 1018 1 chr7B.!!$R3 1017
21 TraesCS2B01G319900 chr7B 133881712 133882393 681 True 845 845 89.565 105 769 1 chr7B.!!$R2 664
22 TraesCS2B01G319900 chr4B 541445775 541447641 1866 False 1202 1624 89.562 1 1907 2 chr4B.!!$F2 1906
23 TraesCS2B01G319900 chr7D 121214986 121215538 552 True 625 625 87.230 1343 1891 1 chr7D.!!$R2 548
24 TraesCS2B01G319900 chr1B 602893572 602894194 622 False 538 538 83.438 1 590 1 chr1B.!!$F2 589

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
174 235 0.328158 TAGAAGGGGGATTGGGGGAC 60.328 60.0 0.0 0.0 0.0 4.46 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2101 2309 0.03438 TCACTGGACGGAGGGAGTAG 60.034 60.0 0.0 0.0 0.0 2.57 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
43 46 3.521796 GGCGCAGAGGGAAATGGC 61.522 66.667 10.83 0.00 0.00 4.40
174 235 0.328158 TAGAAGGGGGATTGGGGGAC 60.328 60.000 0.00 0.00 0.00 4.46
177 238 2.617215 GGGGGATTGGGGGACTGT 60.617 66.667 0.00 0.00 0.00 3.55
715 856 0.551377 TCCAGCCAATACCCCAAGGA 60.551 55.000 0.00 0.00 36.73 3.36
721 862 2.025321 GCCAATACCCCAAGGAAAGAGA 60.025 50.000 0.00 0.00 36.73 3.10
1020 1191 2.967397 CCCGACGAGGTTGTGCTA 59.033 61.111 0.00 0.00 38.74 3.49
1023 1194 1.287815 CGACGAGGTTGTGCTACCA 59.712 57.895 5.68 0.00 40.82 3.25
1051 1222 0.317479 CGAGGAAGACCCAAAGACGT 59.683 55.000 0.00 0.00 37.41 4.34
1056 1227 2.028020 GGAAGACCCAAAGACGTCTGAT 60.028 50.000 20.85 8.69 39.29 2.90
1107 1289 1.582968 CAGCAACAAGAGCCGCAAT 59.417 52.632 0.00 0.00 0.00 3.56
1216 1399 0.868406 CTTCACCAAGCACTTCGTCC 59.132 55.000 0.00 0.00 0.00 4.79
1409 1592 4.498850 CCTCAAGATCATCATCTTCGACGT 60.499 45.833 0.00 0.00 44.86 4.34
1425 1608 0.038166 ACGTGGATGGCATTGAGGTT 59.962 50.000 0.00 0.00 0.00 3.50
1439 1622 1.295792 GAGGTTGTCAACAAGTGCGA 58.704 50.000 17.29 0.00 36.39 5.10
1910 2118 4.293648 GCAACCAAACACGCCCCC 62.294 66.667 0.00 0.00 0.00 5.40
1911 2119 2.835431 CAACCAAACACGCCCCCA 60.835 61.111 0.00 0.00 0.00 4.96
1912 2120 2.835895 AACCAAACACGCCCCCAC 60.836 61.111 0.00 0.00 0.00 4.61
1913 2121 3.663815 AACCAAACACGCCCCCACA 62.664 57.895 0.00 0.00 0.00 4.17
1914 2122 3.601685 CCAAACACGCCCCCACAC 61.602 66.667 0.00 0.00 0.00 3.82
1915 2123 2.518349 CAAACACGCCCCCACACT 60.518 61.111 0.00 0.00 0.00 3.55
1916 2124 1.228003 CAAACACGCCCCCACACTA 60.228 57.895 0.00 0.00 0.00 2.74
1917 2125 0.608035 CAAACACGCCCCCACACTAT 60.608 55.000 0.00 0.00 0.00 2.12
1918 2126 0.111639 AAACACGCCCCCACACTATT 59.888 50.000 0.00 0.00 0.00 1.73
1919 2127 0.608035 AACACGCCCCCACACTATTG 60.608 55.000 0.00 0.00 0.00 1.90
1920 2128 1.002624 CACGCCCCCACACTATTGT 60.003 57.895 0.00 0.00 35.84 2.71
1921 2129 0.250793 CACGCCCCCACACTATTGTA 59.749 55.000 0.00 0.00 33.30 2.41
1922 2130 1.134220 CACGCCCCCACACTATTGTAT 60.134 52.381 0.00 0.00 33.30 2.29
1923 2131 1.134220 ACGCCCCCACACTATTGTATG 60.134 52.381 0.00 0.00 33.30 2.39
1924 2132 1.140052 CGCCCCCACACTATTGTATGA 59.860 52.381 0.00 0.00 33.30 2.15
1925 2133 2.806745 CGCCCCCACACTATTGTATGAG 60.807 54.545 0.00 0.00 33.30 2.90
1926 2134 2.172717 GCCCCCACACTATTGTATGAGT 59.827 50.000 0.00 0.00 33.30 3.41
1927 2135 3.808728 CCCCCACACTATTGTATGAGTG 58.191 50.000 0.59 0.59 46.95 3.51
1928 2136 3.454447 CCCCCACACTATTGTATGAGTGA 59.546 47.826 8.91 0.00 44.88 3.41
1929 2137 4.103153 CCCCCACACTATTGTATGAGTGAT 59.897 45.833 8.91 0.00 44.88 3.06
1930 2138 5.397899 CCCCCACACTATTGTATGAGTGATT 60.398 44.000 8.91 0.00 44.88 2.57
1931 2139 6.183361 CCCCCACACTATTGTATGAGTGATTA 60.183 42.308 8.91 0.00 44.88 1.75
1932 2140 7.453393 CCCCACACTATTGTATGAGTGATTAT 58.547 38.462 8.91 0.00 44.88 1.28
1933 2141 8.593679 CCCCACACTATTGTATGAGTGATTATA 58.406 37.037 8.91 0.00 44.88 0.98
1957 2165 5.674052 AGGATGACTATAGATGACATGGC 57.326 43.478 6.78 0.00 0.00 4.40
1958 2166 5.340322 AGGATGACTATAGATGACATGGCT 58.660 41.667 6.78 0.00 0.00 4.75
1959 2167 6.497640 AGGATGACTATAGATGACATGGCTA 58.502 40.000 6.78 0.00 0.00 3.93
1960 2168 7.131451 AGGATGACTATAGATGACATGGCTAT 58.869 38.462 6.78 2.79 0.00 2.97
1961 2169 7.622878 AGGATGACTATAGATGACATGGCTATT 59.377 37.037 6.78 0.00 0.00 1.73
1962 2170 8.263640 GGATGACTATAGATGACATGGCTATTT 58.736 37.037 6.78 0.00 0.00 1.40
1963 2171 9.311916 GATGACTATAGATGACATGGCTATTTC 57.688 37.037 6.78 0.00 0.00 2.17
1964 2172 8.193953 TGACTATAGATGACATGGCTATTTCA 57.806 34.615 6.78 1.06 0.00 2.69
1965 2173 8.819845 TGACTATAGATGACATGGCTATTTCAT 58.180 33.333 11.08 11.08 36.64 2.57
1970 2178 9.775854 ATAGATGACATGGCTATTTCATATAGC 57.224 33.333 15.69 7.99 44.56 2.97
1977 2185 4.612932 GCTATTTCATATAGCCAGCAGC 57.387 45.455 5.65 0.00 40.69 5.25
1994 2202 4.561735 GCAGCGGCTAAATTATTAACCA 57.438 40.909 0.26 0.00 36.96 3.67
1995 2203 5.121221 GCAGCGGCTAAATTATTAACCAT 57.879 39.130 0.26 0.00 36.96 3.55
1996 2204 4.917415 GCAGCGGCTAAATTATTAACCATG 59.083 41.667 0.26 0.00 36.96 3.66
1997 2205 4.917415 CAGCGGCTAAATTATTAACCATGC 59.083 41.667 0.26 0.00 29.30 4.06
1998 2206 4.827284 AGCGGCTAAATTATTAACCATGCT 59.173 37.500 0.00 0.00 29.30 3.79
1999 2207 5.048713 AGCGGCTAAATTATTAACCATGCTC 60.049 40.000 0.00 0.00 29.30 4.26
2000 2208 5.048713 GCGGCTAAATTATTAACCATGCTCT 60.049 40.000 0.00 0.00 29.30 4.09
2001 2209 6.148811 GCGGCTAAATTATTAACCATGCTCTA 59.851 38.462 0.00 0.00 29.30 2.43
2002 2210 7.308348 GCGGCTAAATTATTAACCATGCTCTAA 60.308 37.037 0.00 0.00 29.30 2.10
2003 2211 8.230486 CGGCTAAATTATTAACCATGCTCTAAG 58.770 37.037 0.00 0.00 29.30 2.18
2004 2212 9.284968 GGCTAAATTATTAACCATGCTCTAAGA 57.715 33.333 0.00 0.00 29.30 2.10
2010 2218 9.640963 ATTATTAACCATGCTCTAAGATACGAC 57.359 33.333 0.00 0.00 0.00 4.34
2011 2219 6.710597 TTAACCATGCTCTAAGATACGACT 57.289 37.500 0.00 0.00 0.00 4.18
2012 2220 4.839668 ACCATGCTCTAAGATACGACTC 57.160 45.455 0.00 0.00 0.00 3.36
2013 2221 4.465886 ACCATGCTCTAAGATACGACTCT 58.534 43.478 0.00 0.00 0.00 3.24
2014 2222 4.890581 ACCATGCTCTAAGATACGACTCTT 59.109 41.667 8.77 8.77 38.90 2.85
2015 2223 6.062749 ACCATGCTCTAAGATACGACTCTTA 58.937 40.000 9.83 9.83 36.82 2.10
2025 2233 9.522804 CTAAGATACGACTCTTAGCTCATTTTT 57.477 33.333 18.74 0.00 44.53 1.94
2026 2234 7.995463 AGATACGACTCTTAGCTCATTTTTC 57.005 36.000 0.00 0.00 0.00 2.29
2027 2235 7.777095 AGATACGACTCTTAGCTCATTTTTCT 58.223 34.615 0.00 0.00 0.00 2.52
2028 2236 7.704472 AGATACGACTCTTAGCTCATTTTTCTG 59.296 37.037 0.00 0.00 0.00 3.02
2029 2237 5.542779 ACGACTCTTAGCTCATTTTTCTGT 58.457 37.500 0.00 0.00 0.00 3.41
2030 2238 5.406780 ACGACTCTTAGCTCATTTTTCTGTG 59.593 40.000 0.00 0.00 0.00 3.66
2031 2239 5.406780 CGACTCTTAGCTCATTTTTCTGTGT 59.593 40.000 0.00 0.00 0.00 3.72
2032 2240 6.586463 CGACTCTTAGCTCATTTTTCTGTGTA 59.414 38.462 0.00 0.00 0.00 2.90
2033 2241 7.201393 CGACTCTTAGCTCATTTTTCTGTGTAG 60.201 40.741 0.00 0.00 0.00 2.74
2034 2242 7.445945 ACTCTTAGCTCATTTTTCTGTGTAGT 58.554 34.615 0.00 0.00 0.00 2.73
2035 2243 7.386299 ACTCTTAGCTCATTTTTCTGTGTAGTG 59.614 37.037 0.00 0.00 0.00 2.74
2036 2244 7.217200 TCTTAGCTCATTTTTCTGTGTAGTGT 58.783 34.615 0.00 0.00 0.00 3.55
2037 2245 8.364894 TCTTAGCTCATTTTTCTGTGTAGTGTA 58.635 33.333 0.00 0.00 0.00 2.90
2038 2246 8.896320 TTAGCTCATTTTTCTGTGTAGTGTAA 57.104 30.769 0.00 0.00 0.00 2.41
2039 2247 7.986085 AGCTCATTTTTCTGTGTAGTGTAAT 57.014 32.000 0.00 0.00 0.00 1.89
2040 2248 8.396272 AGCTCATTTTTCTGTGTAGTGTAATT 57.604 30.769 0.00 0.00 0.00 1.40
2041 2249 9.502091 AGCTCATTTTTCTGTGTAGTGTAATTA 57.498 29.630 0.00 0.00 0.00 1.40
2048 2256 9.502091 TTTTCTGTGTAGTGTAATTAATGCTCT 57.498 29.630 0.00 0.00 0.00 4.09
2050 2258 9.803315 TTCTGTGTAGTGTAATTAATGCTCTAG 57.197 33.333 0.00 0.00 0.00 2.43
2051 2259 8.967918 TCTGTGTAGTGTAATTAATGCTCTAGT 58.032 33.333 0.00 0.00 0.00 2.57
2052 2260 9.239002 CTGTGTAGTGTAATTAATGCTCTAGTC 57.761 37.037 0.00 0.00 0.00 2.59
2053 2261 8.967918 TGTGTAGTGTAATTAATGCTCTAGTCT 58.032 33.333 0.00 0.00 0.00 3.24
2054 2262 9.804758 GTGTAGTGTAATTAATGCTCTAGTCTT 57.195 33.333 0.00 0.00 0.00 3.01
2058 2266 9.726438 AGTGTAATTAATGCTCTAGTCTTTTGT 57.274 29.630 0.00 0.00 0.00 2.83
2059 2267 9.760660 GTGTAATTAATGCTCTAGTCTTTTGTG 57.239 33.333 0.00 0.00 0.00 3.33
2060 2268 8.946085 TGTAATTAATGCTCTAGTCTTTTGTGG 58.054 33.333 0.00 0.00 0.00 4.17
2061 2269 5.880054 TTAATGCTCTAGTCTTTTGTGGC 57.120 39.130 0.00 0.00 0.00 5.01
2062 2270 2.928801 TGCTCTAGTCTTTTGTGGCA 57.071 45.000 0.00 0.00 0.00 4.92
2063 2271 3.423539 TGCTCTAGTCTTTTGTGGCAT 57.576 42.857 0.00 0.00 0.00 4.40
2064 2272 4.551702 TGCTCTAGTCTTTTGTGGCATA 57.448 40.909 0.00 0.00 0.00 3.14
2065 2273 5.102953 TGCTCTAGTCTTTTGTGGCATAT 57.897 39.130 0.00 0.00 0.00 1.78
2066 2274 4.877823 TGCTCTAGTCTTTTGTGGCATATG 59.122 41.667 0.00 0.00 0.00 1.78
2067 2275 4.878397 GCTCTAGTCTTTTGTGGCATATGT 59.122 41.667 4.29 0.00 0.00 2.29
2068 2276 5.007136 GCTCTAGTCTTTTGTGGCATATGTC 59.993 44.000 0.00 0.00 0.00 3.06
2069 2277 5.428253 TCTAGTCTTTTGTGGCATATGTCC 58.572 41.667 4.54 7.02 0.00 4.02
2070 2278 4.307032 AGTCTTTTGTGGCATATGTCCT 57.693 40.909 4.54 0.00 0.00 3.85
2071 2279 4.666512 AGTCTTTTGTGGCATATGTCCTT 58.333 39.130 4.54 0.00 0.00 3.36
2072 2280 5.815581 AGTCTTTTGTGGCATATGTCCTTA 58.184 37.500 4.54 0.00 0.00 2.69
2073 2281 6.426587 AGTCTTTTGTGGCATATGTCCTTAT 58.573 36.000 4.54 0.00 0.00 1.73
2074 2282 6.891908 AGTCTTTTGTGGCATATGTCCTTATT 59.108 34.615 4.54 0.00 0.00 1.40
2075 2283 7.397192 AGTCTTTTGTGGCATATGTCCTTATTT 59.603 33.333 4.54 0.00 0.00 1.40
2076 2284 8.034804 GTCTTTTGTGGCATATGTCCTTATTTT 58.965 33.333 4.54 0.00 0.00 1.82
2077 2285 8.592809 TCTTTTGTGGCATATGTCCTTATTTTT 58.407 29.630 4.54 0.00 0.00 1.94
2078 2286 8.770438 TTTTGTGGCATATGTCCTTATTTTTC 57.230 30.769 4.54 0.00 0.00 2.29
2079 2287 7.716799 TTGTGGCATATGTCCTTATTTTTCT 57.283 32.000 4.54 0.00 0.00 2.52
2080 2288 7.333528 TGTGGCATATGTCCTTATTTTTCTC 57.666 36.000 4.54 0.00 0.00 2.87
2081 2289 7.118723 TGTGGCATATGTCCTTATTTTTCTCT 58.881 34.615 4.54 0.00 0.00 3.10
2082 2290 7.615365 TGTGGCATATGTCCTTATTTTTCTCTT 59.385 33.333 4.54 0.00 0.00 2.85
2083 2291 8.131731 GTGGCATATGTCCTTATTTTTCTCTTC 58.868 37.037 4.54 0.00 0.00 2.87
2084 2292 7.285401 TGGCATATGTCCTTATTTTTCTCTTCC 59.715 37.037 4.54 0.00 0.00 3.46
2085 2293 7.503902 GGCATATGTCCTTATTTTTCTCTTCCT 59.496 37.037 4.29 0.00 0.00 3.36
2086 2294 8.907885 GCATATGTCCTTATTTTTCTCTTCCTT 58.092 33.333 4.29 0.00 0.00 3.36
2090 2298 8.996651 TGTCCTTATTTTTCTCTTCCTTTCTT 57.003 30.769 0.00 0.00 0.00 2.52
2091 2299 9.067986 TGTCCTTATTTTTCTCTTCCTTTCTTC 57.932 33.333 0.00 0.00 0.00 2.87
2092 2300 9.290988 GTCCTTATTTTTCTCTTCCTTTCTTCT 57.709 33.333 0.00 0.00 0.00 2.85
2093 2301 9.508642 TCCTTATTTTTCTCTTCCTTTCTTCTC 57.491 33.333 0.00 0.00 0.00 2.87
2094 2302 9.513906 CCTTATTTTTCTCTTCCTTTCTTCTCT 57.486 33.333 0.00 0.00 0.00 3.10
2096 2304 7.994425 ATTTTTCTCTTCCTTTCTTCTCTCC 57.006 36.000 0.00 0.00 0.00 3.71
2097 2305 6.500589 TTTTCTCTTCCTTTCTTCTCTCCA 57.499 37.500 0.00 0.00 0.00 3.86
2098 2306 5.476091 TTCTCTTCCTTTCTTCTCTCCAC 57.524 43.478 0.00 0.00 0.00 4.02
2099 2307 4.483950 TCTCTTCCTTTCTTCTCTCCACA 58.516 43.478 0.00 0.00 0.00 4.17
2100 2308 4.901849 TCTCTTCCTTTCTTCTCTCCACAA 59.098 41.667 0.00 0.00 0.00 3.33
2101 2309 4.962155 TCTTCCTTTCTTCTCTCCACAAC 58.038 43.478 0.00 0.00 0.00 3.32
2102 2310 4.656112 TCTTCCTTTCTTCTCTCCACAACT 59.344 41.667 0.00 0.00 0.00 3.16
2103 2311 5.839063 TCTTCCTTTCTTCTCTCCACAACTA 59.161 40.000 0.00 0.00 0.00 2.24
2104 2312 5.470047 TCCTTTCTTCTCTCCACAACTAC 57.530 43.478 0.00 0.00 0.00 2.73
2105 2313 5.148502 TCCTTTCTTCTCTCCACAACTACT 58.851 41.667 0.00 0.00 0.00 2.57
2106 2314 5.244178 TCCTTTCTTCTCTCCACAACTACTC 59.756 44.000 0.00 0.00 0.00 2.59
2107 2315 5.470047 TTTCTTCTCTCCACAACTACTCC 57.530 43.478 0.00 0.00 0.00 3.85
2108 2316 3.432378 TCTTCTCTCCACAACTACTCCC 58.568 50.000 0.00 0.00 0.00 4.30
2109 2317 3.076182 TCTTCTCTCCACAACTACTCCCT 59.924 47.826 0.00 0.00 0.00 4.20
2110 2318 3.088789 TCTCTCCACAACTACTCCCTC 57.911 52.381 0.00 0.00 0.00 4.30
2111 2319 2.104170 CTCTCCACAACTACTCCCTCC 58.896 57.143 0.00 0.00 0.00 4.30
2112 2320 0.818296 CTCCACAACTACTCCCTCCG 59.182 60.000 0.00 0.00 0.00 4.63
2113 2321 0.113776 TCCACAACTACTCCCTCCGT 59.886 55.000 0.00 0.00 0.00 4.69
2114 2322 0.531200 CCACAACTACTCCCTCCGTC 59.469 60.000 0.00 0.00 0.00 4.79
2115 2323 0.531200 CACAACTACTCCCTCCGTCC 59.469 60.000 0.00 0.00 0.00 4.79
2116 2324 0.113776 ACAACTACTCCCTCCGTCCA 59.886 55.000 0.00 0.00 0.00 4.02
2117 2325 0.818296 CAACTACTCCCTCCGTCCAG 59.182 60.000 0.00 0.00 0.00 3.86
2118 2326 0.408700 AACTACTCCCTCCGTCCAGT 59.591 55.000 0.00 0.00 0.00 4.00
2119 2327 0.323542 ACTACTCCCTCCGTCCAGTG 60.324 60.000 0.00 0.00 0.00 3.66
2120 2328 0.034380 CTACTCCCTCCGTCCAGTGA 60.034 60.000 0.00 0.00 0.00 3.41
2121 2329 0.406750 TACTCCCTCCGTCCAGTGAA 59.593 55.000 0.00 0.00 0.00 3.18
2122 2330 0.471211 ACTCCCTCCGTCCAGTGAAA 60.471 55.000 0.00 0.00 0.00 2.69
2123 2331 0.685097 CTCCCTCCGTCCAGTGAAAA 59.315 55.000 0.00 0.00 0.00 2.29
2124 2332 0.685097 TCCCTCCGTCCAGTGAAAAG 59.315 55.000 0.00 0.00 0.00 2.27
2125 2333 0.396811 CCCTCCGTCCAGTGAAAAGT 59.603 55.000 0.00 0.00 0.00 2.66
2126 2334 1.512926 CCTCCGTCCAGTGAAAAGTG 58.487 55.000 0.00 0.00 0.00 3.16
2127 2335 1.202651 CCTCCGTCCAGTGAAAAGTGT 60.203 52.381 0.00 0.00 0.00 3.55
2128 2336 2.036733 CCTCCGTCCAGTGAAAAGTGTA 59.963 50.000 0.00 0.00 0.00 2.90
2129 2337 3.057734 CTCCGTCCAGTGAAAAGTGTAC 58.942 50.000 0.00 0.00 0.00 2.90
2130 2338 2.431419 TCCGTCCAGTGAAAAGTGTACA 59.569 45.455 0.00 0.00 0.00 2.90
2131 2339 3.070446 TCCGTCCAGTGAAAAGTGTACAT 59.930 43.478 0.00 0.00 0.00 2.29
2132 2340 4.281435 TCCGTCCAGTGAAAAGTGTACATA 59.719 41.667 0.00 0.00 0.00 2.29
2133 2341 5.046878 TCCGTCCAGTGAAAAGTGTACATAT 60.047 40.000 0.00 0.00 0.00 1.78
2134 2342 6.153170 TCCGTCCAGTGAAAAGTGTACATATA 59.847 38.462 0.00 0.00 0.00 0.86
2135 2343 6.814644 CCGTCCAGTGAAAAGTGTACATATAA 59.185 38.462 0.00 0.00 0.00 0.98
2136 2344 7.332430 CCGTCCAGTGAAAAGTGTACATATAAA 59.668 37.037 0.00 0.00 0.00 1.40
2137 2345 8.714179 CGTCCAGTGAAAAGTGTACATATAAAA 58.286 33.333 0.00 0.00 0.00 1.52
2161 2369 9.942850 AAAATTTTAGGACAAATTATGGAGTGG 57.057 29.630 0.37 0.00 35.67 4.00
2162 2370 8.893563 AATTTTAGGACAAATTATGGAGTGGA 57.106 30.769 0.00 0.00 35.09 4.02
2163 2371 7.938140 TTTTAGGACAAATTATGGAGTGGAG 57.062 36.000 0.00 0.00 0.00 3.86
2164 2372 6.636454 TTAGGACAAATTATGGAGTGGAGT 57.364 37.500 0.00 0.00 0.00 3.85
2165 2373 5.104259 AGGACAAATTATGGAGTGGAGTC 57.896 43.478 0.00 0.00 0.00 3.36
2166 2374 4.536090 AGGACAAATTATGGAGTGGAGTCA 59.464 41.667 0.00 0.00 0.00 3.41
2167 2375 5.014123 AGGACAAATTATGGAGTGGAGTCAA 59.986 40.000 0.00 0.00 0.00 3.18
2168 2376 5.710099 GGACAAATTATGGAGTGGAGTCAAA 59.290 40.000 0.00 0.00 0.00 2.69
2169 2377 6.208599 GGACAAATTATGGAGTGGAGTCAAAA 59.791 38.462 0.00 0.00 0.00 2.44
2170 2378 7.255801 GGACAAATTATGGAGTGGAGTCAAAAA 60.256 37.037 0.00 0.00 0.00 1.94
2171 2379 8.193953 ACAAATTATGGAGTGGAGTCAAAAAT 57.806 30.769 0.00 0.00 0.00 1.82
2172 2380 8.090214 ACAAATTATGGAGTGGAGTCAAAAATG 58.910 33.333 0.00 0.00 0.00 2.32
2173 2381 5.643379 TTATGGAGTGGAGTCAAAAATGC 57.357 39.130 0.00 0.00 0.00 3.56
2174 2382 2.942804 TGGAGTGGAGTCAAAAATGCA 58.057 42.857 0.00 0.00 0.00 3.96
2175 2383 2.622942 TGGAGTGGAGTCAAAAATGCAC 59.377 45.455 0.00 0.00 37.97 4.57
2177 2385 4.072131 GGAGTGGAGTCAAAAATGCACTA 58.928 43.478 0.12 0.00 46.48 2.74
2178 2386 4.154918 GGAGTGGAGTCAAAAATGCACTAG 59.845 45.833 0.12 0.00 46.48 2.57
2179 2387 4.074970 AGTGGAGTCAAAAATGCACTAGG 58.925 43.478 0.00 0.00 44.96 3.02
2180 2388 4.072131 GTGGAGTCAAAAATGCACTAGGA 58.928 43.478 0.00 0.00 35.17 2.94
2181 2389 4.518970 GTGGAGTCAAAAATGCACTAGGAA 59.481 41.667 0.00 0.00 35.17 3.36
2182 2390 4.761739 TGGAGTCAAAAATGCACTAGGAAG 59.238 41.667 0.00 0.00 0.00 3.46
2183 2391 5.003804 GGAGTCAAAAATGCACTAGGAAGA 58.996 41.667 0.00 0.00 0.00 2.87
2184 2392 5.649831 GGAGTCAAAAATGCACTAGGAAGAT 59.350 40.000 0.00 0.00 0.00 2.40
2185 2393 6.404074 GGAGTCAAAAATGCACTAGGAAGATG 60.404 42.308 0.00 0.00 0.00 2.90
2186 2394 5.098211 GTCAAAAATGCACTAGGAAGATGC 58.902 41.667 0.00 0.00 39.88 3.91
2190 2398 1.742761 TGCACTAGGAAGATGCAAGC 58.257 50.000 2.70 0.00 45.96 4.01
2191 2399 1.020437 GCACTAGGAAGATGCAAGCC 58.980 55.000 0.00 0.00 39.23 4.35
2192 2400 1.679944 GCACTAGGAAGATGCAAGCCA 60.680 52.381 0.00 0.00 39.23 4.75
2193 2401 2.012673 CACTAGGAAGATGCAAGCCAC 58.987 52.381 0.00 0.00 0.00 5.01
2194 2402 1.065126 ACTAGGAAGATGCAAGCCACC 60.065 52.381 0.00 0.00 0.00 4.61
2195 2403 0.991146 TAGGAAGATGCAAGCCACCA 59.009 50.000 0.00 0.00 0.00 4.17
2196 2404 0.333993 AGGAAGATGCAAGCCACCAT 59.666 50.000 0.00 0.00 0.00 3.55
2197 2405 0.743097 GGAAGATGCAAGCCACCATC 59.257 55.000 0.00 0.00 38.45 3.51
2199 2407 1.674962 GAAGATGCAAGCCACCATCTC 59.325 52.381 10.02 3.04 45.40 2.75
2200 2408 0.917533 AGATGCAAGCCACCATCTCT 59.082 50.000 0.00 0.00 43.37 3.10
2201 2409 1.134159 AGATGCAAGCCACCATCTCTC 60.134 52.381 0.00 0.00 43.37 3.20
2202 2410 0.622136 ATGCAAGCCACCATCTCTCA 59.378 50.000 0.00 0.00 0.00 3.27
2203 2411 0.321919 TGCAAGCCACCATCTCTCAC 60.322 55.000 0.00 0.00 0.00 3.51
2204 2412 1.028868 GCAAGCCACCATCTCTCACC 61.029 60.000 0.00 0.00 0.00 4.02
2205 2413 0.393537 CAAGCCACCATCTCTCACCC 60.394 60.000 0.00 0.00 0.00 4.61
2206 2414 1.566298 AAGCCACCATCTCTCACCCC 61.566 60.000 0.00 0.00 0.00 4.95
2207 2415 3.049080 GCCACCATCTCTCACCCCC 62.049 68.421 0.00 0.00 0.00 5.40
2222 2430 2.799176 CCCCCAATGAGCTAAGTGC 58.201 57.895 0.00 0.00 43.29 4.40
2237 2445 5.321516 GCTAAGTGCGTGTACAAATTAAGG 58.678 41.667 0.00 0.00 0.00 2.69
2238 2446 5.121142 GCTAAGTGCGTGTACAAATTAAGGA 59.879 40.000 0.00 0.00 0.00 3.36
2239 2447 5.607119 AAGTGCGTGTACAAATTAAGGAG 57.393 39.130 0.00 0.00 0.00 3.69
2240 2448 4.000988 AGTGCGTGTACAAATTAAGGAGG 58.999 43.478 0.00 0.00 0.00 4.30
2241 2449 2.745281 TGCGTGTACAAATTAAGGAGGC 59.255 45.455 0.00 0.00 0.00 4.70
2242 2450 2.096980 GCGTGTACAAATTAAGGAGGCC 59.903 50.000 0.00 0.00 0.00 5.19
2243 2451 3.340034 CGTGTACAAATTAAGGAGGCCA 58.660 45.455 5.01 0.00 0.00 5.36
2244 2452 3.945285 CGTGTACAAATTAAGGAGGCCAT 59.055 43.478 5.01 0.00 0.00 4.40
2245 2453 4.201910 CGTGTACAAATTAAGGAGGCCATG 60.202 45.833 5.01 0.00 0.00 3.66
2246 2454 4.705023 GTGTACAAATTAAGGAGGCCATGT 59.295 41.667 5.01 0.00 0.00 3.21
2247 2455 4.704540 TGTACAAATTAAGGAGGCCATGTG 59.295 41.667 5.01 0.00 0.00 3.21
2248 2456 3.778265 ACAAATTAAGGAGGCCATGTGT 58.222 40.909 5.01 0.00 0.00 3.72
2249 2457 4.929479 ACAAATTAAGGAGGCCATGTGTA 58.071 39.130 5.01 0.00 0.00 2.90
2250 2458 4.949856 ACAAATTAAGGAGGCCATGTGTAG 59.050 41.667 5.01 0.00 0.00 2.74
2251 2459 5.192927 CAAATTAAGGAGGCCATGTGTAGA 58.807 41.667 5.01 0.00 0.00 2.59
2252 2460 5.450818 AATTAAGGAGGCCATGTGTAGAA 57.549 39.130 5.01 0.00 0.00 2.10
2253 2461 5.653255 ATTAAGGAGGCCATGTGTAGAAT 57.347 39.130 5.01 0.00 0.00 2.40
2254 2462 3.287867 AAGGAGGCCATGTGTAGAATG 57.712 47.619 5.01 0.00 0.00 2.67
2255 2463 2.200081 AGGAGGCCATGTGTAGAATGT 58.800 47.619 5.01 0.00 0.00 2.71
2256 2464 2.578021 AGGAGGCCATGTGTAGAATGTT 59.422 45.455 5.01 0.00 0.00 2.71
2257 2465 3.780294 AGGAGGCCATGTGTAGAATGTTA 59.220 43.478 5.01 0.00 0.00 2.41
2258 2466 4.413520 AGGAGGCCATGTGTAGAATGTTAT 59.586 41.667 5.01 0.00 0.00 1.89
2259 2467 5.103940 AGGAGGCCATGTGTAGAATGTTATT 60.104 40.000 5.01 0.00 0.00 1.40
2260 2468 5.009010 GGAGGCCATGTGTAGAATGTTATTG 59.991 44.000 5.01 0.00 0.00 1.90
2261 2469 4.889409 AGGCCATGTGTAGAATGTTATTGG 59.111 41.667 5.01 0.00 0.00 3.16
2262 2470 4.644685 GGCCATGTGTAGAATGTTATTGGT 59.355 41.667 0.00 0.00 0.00 3.67
2263 2471 5.221048 GGCCATGTGTAGAATGTTATTGGTC 60.221 44.000 0.00 0.00 0.00 4.02
2264 2472 5.590259 GCCATGTGTAGAATGTTATTGGTCT 59.410 40.000 0.00 0.00 0.00 3.85
2265 2473 6.095440 GCCATGTGTAGAATGTTATTGGTCTT 59.905 38.462 0.00 0.00 0.00 3.01
2266 2474 7.282224 GCCATGTGTAGAATGTTATTGGTCTTA 59.718 37.037 0.00 0.00 0.00 2.10
2267 2475 9.173021 CCATGTGTAGAATGTTATTGGTCTTAA 57.827 33.333 0.00 0.00 0.00 1.85
2275 2483 8.889717 AGAATGTTATTGGTCTTAATTACCGTG 58.110 33.333 3.43 0.00 40.08 4.94
2276 2484 8.570068 AATGTTATTGGTCTTAATTACCGTGT 57.430 30.769 3.43 0.00 40.08 4.49
2277 2485 7.367159 TGTTATTGGTCTTAATTACCGTGTG 57.633 36.000 3.43 0.00 40.08 3.82
2278 2486 7.160049 TGTTATTGGTCTTAATTACCGTGTGA 58.840 34.615 3.43 0.00 40.08 3.58
2279 2487 7.825270 TGTTATTGGTCTTAATTACCGTGTGAT 59.175 33.333 3.43 0.00 40.08 3.06
2280 2488 6.677781 ATTGGTCTTAATTACCGTGTGATG 57.322 37.500 3.43 0.00 40.08 3.07
2281 2489 5.408880 TGGTCTTAATTACCGTGTGATGA 57.591 39.130 3.43 0.00 40.08 2.92
2282 2490 5.416083 TGGTCTTAATTACCGTGTGATGAG 58.584 41.667 3.43 0.00 40.08 2.90
2283 2491 5.186215 TGGTCTTAATTACCGTGTGATGAGA 59.814 40.000 3.43 0.00 40.08 3.27
2284 2492 5.749109 GGTCTTAATTACCGTGTGATGAGAG 59.251 44.000 0.00 0.00 0.00 3.20
2285 2493 6.405508 GGTCTTAATTACCGTGTGATGAGAGA 60.406 42.308 0.00 0.00 0.00 3.10
2286 2494 7.033791 GTCTTAATTACCGTGTGATGAGAGAA 58.966 38.462 0.00 0.00 0.00 2.87
2287 2495 7.544566 GTCTTAATTACCGTGTGATGAGAGAAA 59.455 37.037 0.00 0.00 0.00 2.52
2288 2496 8.092068 TCTTAATTACCGTGTGATGAGAGAAAA 58.908 33.333 0.00 0.00 0.00 2.29
2289 2497 6.727824 AATTACCGTGTGATGAGAGAAAAG 57.272 37.500 0.00 0.00 0.00 2.27
2290 2498 3.753294 ACCGTGTGATGAGAGAAAAGT 57.247 42.857 0.00 0.00 0.00 2.66
2291 2499 4.866508 ACCGTGTGATGAGAGAAAAGTA 57.133 40.909 0.00 0.00 0.00 2.24
2292 2500 5.407407 ACCGTGTGATGAGAGAAAAGTAT 57.593 39.130 0.00 0.00 0.00 2.12
2293 2501 5.794894 ACCGTGTGATGAGAGAAAAGTATT 58.205 37.500 0.00 0.00 0.00 1.89
2294 2502 6.931838 ACCGTGTGATGAGAGAAAAGTATTA 58.068 36.000 0.00 0.00 0.00 0.98
2295 2503 7.556844 ACCGTGTGATGAGAGAAAAGTATTAT 58.443 34.615 0.00 0.00 0.00 1.28
2296 2504 8.692710 ACCGTGTGATGAGAGAAAAGTATTATA 58.307 33.333 0.00 0.00 0.00 0.98
2297 2505 9.698309 CCGTGTGATGAGAGAAAAGTATTATAT 57.302 33.333 0.00 0.00 0.00 0.86
2314 2522 9.531158 AGTATTATATGGAAGGTAGAGGTACAC 57.469 37.037 0.00 0.00 0.00 2.90
2315 2523 9.531158 GTATTATATGGAAGGTAGAGGTACACT 57.469 37.037 0.00 0.00 0.00 3.55
2316 2524 8.653036 ATTATATGGAAGGTAGAGGTACACTC 57.347 38.462 0.00 0.00 46.98 3.51
2334 2542 6.966435 ACACTCTTTTGTGGACAAATTTTG 57.034 33.333 7.59 7.59 44.30 2.44
2335 2543 6.696411 ACACTCTTTTGTGGACAAATTTTGA 58.304 32.000 15.81 2.89 44.30 2.69
2336 2544 7.158021 ACACTCTTTTGTGGACAAATTTTGAA 58.842 30.769 15.81 0.00 44.30 2.69
2337 2545 7.331687 ACACTCTTTTGTGGACAAATTTTGAAG 59.668 33.333 15.81 7.05 44.30 3.02
2338 2546 6.313658 ACTCTTTTGTGGACAAATTTTGAAGC 59.686 34.615 15.81 4.84 44.30 3.86
2339 2547 5.584251 TCTTTTGTGGACAAATTTTGAAGCC 59.416 36.000 15.81 12.95 44.30 4.35
2340 2548 4.478206 TTGTGGACAAATTTTGAAGCCA 57.522 36.364 15.81 15.02 32.11 4.75
2341 2549 4.478206 TGTGGACAAATTTTGAAGCCAA 57.522 36.364 15.81 8.03 34.01 4.52
2342 2550 4.836825 TGTGGACAAATTTTGAAGCCAAA 58.163 34.783 15.81 11.32 40.24 3.28
2343 2551 4.633565 TGTGGACAAATTTTGAAGCCAAAC 59.366 37.500 15.81 9.11 41.54 2.93
2344 2552 3.868077 TGGACAAATTTTGAAGCCAAACG 59.132 39.130 15.81 0.00 41.54 3.60
2345 2553 3.868661 GGACAAATTTTGAAGCCAAACGT 59.131 39.130 15.81 0.00 41.54 3.99
2346 2554 5.044558 GGACAAATTTTGAAGCCAAACGTA 58.955 37.500 15.81 0.00 41.54 3.57
2347 2555 5.051307 GGACAAATTTTGAAGCCAAACGTAC 60.051 40.000 15.81 0.00 41.54 3.67
2348 2556 5.411781 ACAAATTTTGAAGCCAAACGTACA 58.588 33.333 15.81 0.00 41.54 2.90
2349 2557 5.289917 ACAAATTTTGAAGCCAAACGTACAC 59.710 36.000 15.81 0.00 41.54 2.90
2350 2558 4.911514 ATTTTGAAGCCAAACGTACACT 57.088 36.364 0.00 0.00 41.54 3.55
2351 2559 3.955771 TTTGAAGCCAAACGTACACTC 57.044 42.857 0.00 0.00 37.36 3.51
2352 2560 2.902705 TGAAGCCAAACGTACACTCT 57.097 45.000 0.00 0.00 0.00 3.24
2353 2561 3.188159 TGAAGCCAAACGTACACTCTT 57.812 42.857 0.00 0.00 0.00 2.85
2354 2562 3.128349 TGAAGCCAAACGTACACTCTTC 58.872 45.455 0.00 0.00 0.00 2.87
2355 2563 2.902705 AGCCAAACGTACACTCTTCA 57.097 45.000 0.00 0.00 0.00 3.02
2356 2564 3.402628 AGCCAAACGTACACTCTTCAT 57.597 42.857 0.00 0.00 0.00 2.57
2357 2565 3.326747 AGCCAAACGTACACTCTTCATC 58.673 45.455 0.00 0.00 0.00 2.92
2358 2566 3.064207 GCCAAACGTACACTCTTCATCA 58.936 45.455 0.00 0.00 0.00 3.07
2359 2567 3.123621 GCCAAACGTACACTCTTCATCAG 59.876 47.826 0.00 0.00 0.00 2.90
2360 2568 4.556233 CCAAACGTACACTCTTCATCAGA 58.444 43.478 0.00 0.00 0.00 3.27
2361 2569 4.386049 CCAAACGTACACTCTTCATCAGAC 59.614 45.833 0.00 0.00 0.00 3.51
2362 2570 3.473093 ACGTACACTCTTCATCAGACG 57.527 47.619 0.00 0.00 0.00 4.18
2363 2571 2.161808 ACGTACACTCTTCATCAGACGG 59.838 50.000 0.00 0.00 0.00 4.79
2364 2572 2.418976 CGTACACTCTTCATCAGACGGA 59.581 50.000 0.00 0.00 0.00 4.69
2365 2573 3.486043 CGTACACTCTTCATCAGACGGAG 60.486 52.174 0.00 0.00 33.03 4.63
2366 2574 1.203523 ACACTCTTCATCAGACGGAGC 59.796 52.381 0.00 0.00 31.15 4.70
2367 2575 0.453793 ACTCTTCATCAGACGGAGCG 59.546 55.000 0.00 0.00 31.15 5.03
2368 2576 0.735471 CTCTTCATCAGACGGAGCGA 59.265 55.000 0.00 0.00 0.00 4.93
2369 2577 0.735471 TCTTCATCAGACGGAGCGAG 59.265 55.000 0.00 0.00 0.00 5.03
2370 2578 0.453793 CTTCATCAGACGGAGCGAGT 59.546 55.000 0.00 0.00 0.00 4.18
2371 2579 1.671328 CTTCATCAGACGGAGCGAGTA 59.329 52.381 0.00 0.00 0.00 2.59
2372 2580 1.300481 TCATCAGACGGAGCGAGTAG 58.700 55.000 0.00 0.00 0.00 2.57
2373 2581 0.309302 CATCAGACGGAGCGAGTAGG 59.691 60.000 0.00 0.00 0.00 3.18
2374 2582 0.107116 ATCAGACGGAGCGAGTAGGT 60.107 55.000 0.00 0.00 0.00 3.08
2375 2583 0.322277 TCAGACGGAGCGAGTAGGTT 60.322 55.000 0.00 0.00 0.00 3.50
2376 2584 1.065926 TCAGACGGAGCGAGTAGGTTA 60.066 52.381 0.00 0.00 0.00 2.85
2377 2585 1.063764 CAGACGGAGCGAGTAGGTTAC 59.936 57.143 0.00 0.00 0.00 2.50
2378 2586 1.089920 GACGGAGCGAGTAGGTTACA 58.910 55.000 0.00 0.00 0.00 2.41
2379 2587 1.470098 GACGGAGCGAGTAGGTTACAA 59.530 52.381 0.00 0.00 0.00 2.41
2380 2588 1.888512 ACGGAGCGAGTAGGTTACAAA 59.111 47.619 0.00 0.00 0.00 2.83
2381 2589 2.494870 ACGGAGCGAGTAGGTTACAAAT 59.505 45.455 0.00 0.00 0.00 2.32
2382 2590 2.858344 CGGAGCGAGTAGGTTACAAATG 59.142 50.000 0.00 0.00 0.00 2.32
2383 2591 3.675228 CGGAGCGAGTAGGTTACAAATGT 60.675 47.826 0.00 0.00 0.00 2.71
2384 2592 4.251268 GGAGCGAGTAGGTTACAAATGTT 58.749 43.478 0.00 0.00 0.00 2.71
2385 2593 4.092968 GGAGCGAGTAGGTTACAAATGTTG 59.907 45.833 0.00 0.00 0.00 3.33
2386 2594 4.890088 AGCGAGTAGGTTACAAATGTTGA 58.110 39.130 0.00 0.00 0.00 3.18
2387 2595 4.929808 AGCGAGTAGGTTACAAATGTTGAG 59.070 41.667 0.00 0.00 0.00 3.02
2388 2596 4.927425 GCGAGTAGGTTACAAATGTTGAGA 59.073 41.667 0.00 0.00 0.00 3.27
2389 2597 5.581085 GCGAGTAGGTTACAAATGTTGAGAT 59.419 40.000 0.00 0.00 0.00 2.75
2390 2598 6.455646 GCGAGTAGGTTACAAATGTTGAGATG 60.456 42.308 0.00 0.00 0.00 2.90
2391 2599 6.455646 CGAGTAGGTTACAAATGTTGAGATGC 60.456 42.308 0.00 0.00 0.00 3.91
2392 2600 6.237901 AGTAGGTTACAAATGTTGAGATGCA 58.762 36.000 0.00 0.00 0.00 3.96
2393 2601 6.714810 AGTAGGTTACAAATGTTGAGATGCAA 59.285 34.615 0.00 0.00 0.00 4.08
2394 2602 6.403866 AGGTTACAAATGTTGAGATGCAAA 57.596 33.333 0.00 0.00 38.44 3.68
2395 2603 6.815089 AGGTTACAAATGTTGAGATGCAAAA 58.185 32.000 0.00 0.00 38.44 2.44
2396 2604 7.271511 AGGTTACAAATGTTGAGATGCAAAAA 58.728 30.769 0.00 0.00 38.44 1.94
2397 2605 7.439056 AGGTTACAAATGTTGAGATGCAAAAAG 59.561 33.333 0.00 0.00 38.44 2.27
2398 2606 7.437862 GGTTACAAATGTTGAGATGCAAAAAGA 59.562 33.333 0.00 0.00 38.44 2.52
2399 2607 8.981647 GTTACAAATGTTGAGATGCAAAAAGAT 58.018 29.630 0.00 0.00 38.44 2.40
2401 2609 8.524870 ACAAATGTTGAGATGCAAAAAGATAC 57.475 30.769 0.00 0.00 38.44 2.24
2402 2610 8.362639 ACAAATGTTGAGATGCAAAAAGATACT 58.637 29.630 0.00 0.00 38.44 2.12
2403 2611 9.199982 CAAATGTTGAGATGCAAAAAGATACTT 57.800 29.630 0.00 0.00 38.44 2.24
2407 2615 9.897744 TGTTGAGATGCAAAAAGATACTTAAAG 57.102 29.630 0.00 0.00 38.44 1.85
2408 2616 9.899226 GTTGAGATGCAAAAAGATACTTAAAGT 57.101 29.630 0.00 0.00 38.44 2.66
2439 2647 6.952773 TGCAATATCACTTAAATACCACCC 57.047 37.500 0.00 0.00 0.00 4.61
2440 2648 5.830991 TGCAATATCACTTAAATACCACCCC 59.169 40.000 0.00 0.00 0.00 4.95
2441 2649 6.068670 GCAATATCACTTAAATACCACCCCT 58.931 40.000 0.00 0.00 0.00 4.79
2442 2650 7.147284 TGCAATATCACTTAAATACCACCCCTA 60.147 37.037 0.00 0.00 0.00 3.53
2443 2651 7.722285 GCAATATCACTTAAATACCACCCCTAA 59.278 37.037 0.00 0.00 0.00 2.69
2444 2652 9.284968 CAATATCACTTAAATACCACCCCTAAG 57.715 37.037 0.00 0.00 0.00 2.18
2445 2653 8.808240 ATATCACTTAAATACCACCCCTAAGA 57.192 34.615 0.00 0.00 0.00 2.10
2446 2654 7.707467 ATCACTTAAATACCACCCCTAAGAT 57.293 36.000 0.00 0.00 0.00 2.40
2447 2655 8.808240 ATCACTTAAATACCACCCCTAAGATA 57.192 34.615 0.00 0.00 0.00 1.98
2448 2656 8.026396 TCACTTAAATACCACCCCTAAGATAC 57.974 38.462 0.00 0.00 0.00 2.24
2449 2657 7.624478 TCACTTAAATACCACCCCTAAGATACA 59.376 37.037 0.00 0.00 0.00 2.29
2450 2658 8.269317 CACTTAAATACCACCCCTAAGATACAA 58.731 37.037 0.00 0.00 0.00 2.41
2451 2659 9.010767 ACTTAAATACCACCCCTAAGATACAAT 57.989 33.333 0.00 0.00 0.00 2.71
2452 2660 9.284968 CTTAAATACCACCCCTAAGATACAATG 57.715 37.037 0.00 0.00 0.00 2.82
2453 2661 3.577805 ACCACCCCTAAGATACAATGC 57.422 47.619 0.00 0.00 0.00 3.56
2454 2662 2.849943 ACCACCCCTAAGATACAATGCA 59.150 45.455 0.00 0.00 0.00 3.96
2455 2663 3.463329 ACCACCCCTAAGATACAATGCAT 59.537 43.478 0.00 0.00 0.00 3.96
2456 2664 4.079212 ACCACCCCTAAGATACAATGCATT 60.079 41.667 5.99 5.99 0.00 3.56
2457 2665 4.279169 CCACCCCTAAGATACAATGCATTG 59.721 45.833 32.74 32.74 43.26 2.82
2469 2677 4.182693 CAATGCATTGTGGTGATTGTCT 57.817 40.909 27.81 0.00 33.22 3.41
2470 2678 4.171005 CAATGCATTGTGGTGATTGTCTC 58.829 43.478 27.81 0.00 33.22 3.36
2471 2679 2.161855 TGCATTGTGGTGATTGTCTCC 58.838 47.619 0.00 0.00 0.00 3.71
2472 2680 2.224843 TGCATTGTGGTGATTGTCTCCT 60.225 45.455 0.00 0.00 31.62 3.69
2473 2681 2.821969 GCATTGTGGTGATTGTCTCCTT 59.178 45.455 0.49 0.00 31.62 3.36
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
37 40 6.166982 GCTTATCTACCTCTATTCGCCATTT 58.833 40.000 0.00 0.00 0.00 2.32
43 46 5.105752 GCCATGCTTATCTACCTCTATTCG 58.894 45.833 0.00 0.00 0.00 3.34
174 235 2.010043 GCCACGGTTATGTACCCACAG 61.010 57.143 0.00 0.00 44.70 3.66
177 238 1.603306 GGCCACGGTTATGTACCCA 59.397 57.895 0.00 0.00 44.70 4.51
715 856 1.168714 GCTCCAACGCCAATCTCTTT 58.831 50.000 0.00 0.00 0.00 2.52
721 862 0.462759 GCTCTAGCTCCAACGCCAAT 60.463 55.000 0.00 0.00 38.21 3.16
743 885 2.194056 CCCCATCGCCATGAGCTT 59.806 61.111 0.00 0.00 40.39 3.74
1020 1191 4.608774 TCCTCGACGGTGGGTGGT 62.609 66.667 0.00 0.00 0.00 4.16
1023 1194 2.116772 TCTTCCTCGACGGTGGGT 59.883 61.111 0.00 0.00 0.00 4.51
1051 1222 2.571757 GTCGTCGCCACCATCAGA 59.428 61.111 0.00 0.00 0.00 3.27
1107 1289 0.828022 CCTGATGGTAGTGGCCGTAA 59.172 55.000 0.00 0.00 0.00 3.18
1409 1592 1.075212 TGACAACCTCAATGCCATCCA 59.925 47.619 0.00 0.00 0.00 3.41
1425 1608 0.937304 GCTTCTCGCACTTGTTGACA 59.063 50.000 0.00 0.00 38.92 3.58
1439 1622 0.667792 GAAGGCTTCGTCGTGCTTCT 60.668 55.000 12.12 1.25 0.00 2.85
1484 1667 8.842280 CAGACTCGATAGTAATTAGAAAGGAGT 58.158 37.037 7.68 7.68 35.56 3.85
1680 1885 1.167851 CAATGCCTGGTGTGTGGTAG 58.832 55.000 0.00 0.00 0.00 3.18
1931 2139 9.087871 GCCATGTCATCTATAGTCATCCTATAT 57.912 37.037 0.00 0.00 37.85 0.86
1932 2140 8.285163 AGCCATGTCATCTATAGTCATCCTATA 58.715 37.037 0.00 0.00 37.54 1.31
1933 2141 7.131451 AGCCATGTCATCTATAGTCATCCTAT 58.869 38.462 0.00 0.00 39.71 2.57
1934 2142 6.497640 AGCCATGTCATCTATAGTCATCCTA 58.502 40.000 0.00 0.00 0.00 2.94
1935 2143 5.340322 AGCCATGTCATCTATAGTCATCCT 58.660 41.667 0.00 0.00 0.00 3.24
1936 2144 5.674052 AGCCATGTCATCTATAGTCATCC 57.326 43.478 0.00 0.00 0.00 3.51
1937 2145 9.311916 GAAATAGCCATGTCATCTATAGTCATC 57.688 37.037 0.00 0.00 0.00 2.92
1938 2146 8.819845 TGAAATAGCCATGTCATCTATAGTCAT 58.180 33.333 0.00 0.00 0.00 3.06
1939 2147 8.193953 TGAAATAGCCATGTCATCTATAGTCA 57.806 34.615 0.00 0.00 0.00 3.41
1944 2152 9.775854 GCTATATGAAATAGCCATGTCATCTAT 57.224 33.333 0.60 0.00 38.27 1.98
1956 2164 3.063180 CGCTGCTGGCTATATGAAATAGC 59.937 47.826 8.22 8.22 44.56 2.97
1957 2165 3.620374 CCGCTGCTGGCTATATGAAATAG 59.380 47.826 0.00 0.00 39.13 1.73
1958 2166 3.599343 CCGCTGCTGGCTATATGAAATA 58.401 45.455 0.00 0.00 39.13 1.40
1959 2167 2.430465 CCGCTGCTGGCTATATGAAAT 58.570 47.619 0.00 0.00 39.13 2.17
1960 2168 1.882912 CCGCTGCTGGCTATATGAAA 58.117 50.000 0.00 0.00 39.13 2.69
1961 2169 3.612517 CCGCTGCTGGCTATATGAA 57.387 52.632 0.00 0.00 39.13 2.57
1973 2181 4.561735 TGGTTAATAATTTAGCCGCTGC 57.438 40.909 2.16 0.00 40.54 5.25
1974 2182 4.917415 GCATGGTTAATAATTTAGCCGCTG 59.083 41.667 2.16 0.00 40.54 5.18
1975 2183 4.827284 AGCATGGTTAATAATTTAGCCGCT 59.173 37.500 0.00 0.00 40.54 5.52
1976 2184 5.048713 AGAGCATGGTTAATAATTTAGCCGC 60.049 40.000 0.00 0.00 40.54 6.53
1977 2185 6.560253 AGAGCATGGTTAATAATTTAGCCG 57.440 37.500 0.00 0.00 40.54 5.52
1978 2186 9.284968 TCTTAGAGCATGGTTAATAATTTAGCC 57.715 33.333 0.00 0.00 38.72 3.93
1984 2192 9.640963 GTCGTATCTTAGAGCATGGTTAATAAT 57.359 33.333 0.00 0.00 0.00 1.28
1985 2193 8.857098 AGTCGTATCTTAGAGCATGGTTAATAA 58.143 33.333 0.00 0.00 0.00 1.40
1986 2194 8.405418 AGTCGTATCTTAGAGCATGGTTAATA 57.595 34.615 0.00 0.00 0.00 0.98
1987 2195 7.231722 AGAGTCGTATCTTAGAGCATGGTTAAT 59.768 37.037 0.00 0.00 0.00 1.40
1988 2196 6.546403 AGAGTCGTATCTTAGAGCATGGTTAA 59.454 38.462 0.00 0.00 0.00 2.01
1989 2197 6.062749 AGAGTCGTATCTTAGAGCATGGTTA 58.937 40.000 0.00 0.00 0.00 2.85
1990 2198 4.890581 AGAGTCGTATCTTAGAGCATGGTT 59.109 41.667 0.00 0.00 0.00 3.67
1991 2199 4.465886 AGAGTCGTATCTTAGAGCATGGT 58.534 43.478 0.00 0.00 0.00 3.55
1992 2200 5.446143 AAGAGTCGTATCTTAGAGCATGG 57.554 43.478 0.00 0.00 37.76 3.66
2000 2208 9.517609 GAAAAATGAGCTAAGAGTCGTATCTTA 57.482 33.333 10.30 10.30 40.08 2.10
2001 2209 8.254508 AGAAAAATGAGCTAAGAGTCGTATCTT 58.745 33.333 9.28 9.28 42.20 2.40
2002 2210 7.704472 CAGAAAAATGAGCTAAGAGTCGTATCT 59.296 37.037 0.00 0.00 0.00 1.98
2003 2211 7.489757 ACAGAAAAATGAGCTAAGAGTCGTATC 59.510 37.037 0.00 0.00 0.00 2.24
2004 2212 7.276658 CACAGAAAAATGAGCTAAGAGTCGTAT 59.723 37.037 0.00 0.00 0.00 3.06
2005 2213 6.586463 CACAGAAAAATGAGCTAAGAGTCGTA 59.414 38.462 0.00 0.00 0.00 3.43
2006 2214 5.406780 CACAGAAAAATGAGCTAAGAGTCGT 59.593 40.000 0.00 0.00 0.00 4.34
2007 2215 5.406780 ACACAGAAAAATGAGCTAAGAGTCG 59.593 40.000 0.00 0.00 0.00 4.18
2008 2216 6.793492 ACACAGAAAAATGAGCTAAGAGTC 57.207 37.500 0.00 0.00 0.00 3.36
2009 2217 7.386299 CACTACACAGAAAAATGAGCTAAGAGT 59.614 37.037 0.00 0.00 0.00 3.24
2010 2218 7.386299 ACACTACACAGAAAAATGAGCTAAGAG 59.614 37.037 0.00 0.00 0.00 2.85
2011 2219 7.217200 ACACTACACAGAAAAATGAGCTAAGA 58.783 34.615 0.00 0.00 0.00 2.10
2012 2220 7.426929 ACACTACACAGAAAAATGAGCTAAG 57.573 36.000 0.00 0.00 0.00 2.18
2013 2221 8.896320 TTACACTACACAGAAAAATGAGCTAA 57.104 30.769 0.00 0.00 0.00 3.09
2014 2222 9.502091 AATTACACTACACAGAAAAATGAGCTA 57.498 29.630 0.00 0.00 0.00 3.32
2015 2223 7.986085 ATTACACTACACAGAAAAATGAGCT 57.014 32.000 0.00 0.00 0.00 4.09
2022 2230 9.502091 AGAGCATTAATTACACTACACAGAAAA 57.498 29.630 0.00 0.00 0.00 2.29
2024 2232 9.803315 CTAGAGCATTAATTACACTACACAGAA 57.197 33.333 0.00 0.00 0.00 3.02
2025 2233 8.967918 ACTAGAGCATTAATTACACTACACAGA 58.032 33.333 0.00 0.00 0.00 3.41
2026 2234 9.239002 GACTAGAGCATTAATTACACTACACAG 57.761 37.037 0.00 0.00 0.00 3.66
2027 2235 8.967918 AGACTAGAGCATTAATTACACTACACA 58.032 33.333 0.00 0.00 0.00 3.72
2028 2236 9.804758 AAGACTAGAGCATTAATTACACTACAC 57.195 33.333 0.00 0.00 0.00 2.90
2032 2240 9.726438 ACAAAAGACTAGAGCATTAATTACACT 57.274 29.630 0.00 0.00 0.00 3.55
2033 2241 9.760660 CACAAAAGACTAGAGCATTAATTACAC 57.239 33.333 0.00 0.00 0.00 2.90
2034 2242 8.946085 CCACAAAAGACTAGAGCATTAATTACA 58.054 33.333 0.00 0.00 0.00 2.41
2035 2243 7.910683 GCCACAAAAGACTAGAGCATTAATTAC 59.089 37.037 0.00 0.00 0.00 1.89
2036 2244 7.609918 TGCCACAAAAGACTAGAGCATTAATTA 59.390 33.333 0.00 0.00 0.00 1.40
2037 2245 6.434028 TGCCACAAAAGACTAGAGCATTAATT 59.566 34.615 0.00 0.00 0.00 1.40
2038 2246 5.945784 TGCCACAAAAGACTAGAGCATTAAT 59.054 36.000 0.00 0.00 0.00 1.40
2039 2247 5.312895 TGCCACAAAAGACTAGAGCATTAA 58.687 37.500 0.00 0.00 0.00 1.40
2040 2248 4.905429 TGCCACAAAAGACTAGAGCATTA 58.095 39.130 0.00 0.00 0.00 1.90
2041 2249 3.754965 TGCCACAAAAGACTAGAGCATT 58.245 40.909 0.00 0.00 0.00 3.56
2042 2250 3.423539 TGCCACAAAAGACTAGAGCAT 57.576 42.857 0.00 0.00 0.00 3.79
2043 2251 2.928801 TGCCACAAAAGACTAGAGCA 57.071 45.000 0.00 0.00 0.00 4.26
2044 2252 4.878397 ACATATGCCACAAAAGACTAGAGC 59.122 41.667 1.58 0.00 0.00 4.09
2045 2253 5.525378 GGACATATGCCACAAAAGACTAGAG 59.475 44.000 1.58 0.00 0.00 2.43
2046 2254 5.189736 AGGACATATGCCACAAAAGACTAGA 59.810 40.000 15.63 0.00 0.00 2.43
2047 2255 5.431765 AGGACATATGCCACAAAAGACTAG 58.568 41.667 15.63 0.00 0.00 2.57
2048 2256 5.435686 AGGACATATGCCACAAAAGACTA 57.564 39.130 15.63 0.00 0.00 2.59
2049 2257 4.307032 AGGACATATGCCACAAAAGACT 57.693 40.909 15.63 0.00 0.00 3.24
2050 2258 6.699575 ATAAGGACATATGCCACAAAAGAC 57.300 37.500 15.63 0.00 0.00 3.01
2051 2259 7.716799 AAATAAGGACATATGCCACAAAAGA 57.283 32.000 15.63 0.00 0.00 2.52
2052 2260 8.776376 AAAAATAAGGACATATGCCACAAAAG 57.224 30.769 15.63 0.00 0.00 2.27
2053 2261 8.592809 AGAAAAATAAGGACATATGCCACAAAA 58.407 29.630 15.63 0.97 0.00 2.44
2054 2262 8.133024 AGAAAAATAAGGACATATGCCACAAA 57.867 30.769 15.63 2.32 0.00 2.83
2055 2263 7.615365 AGAGAAAAATAAGGACATATGCCACAA 59.385 33.333 15.63 4.21 0.00 3.33
2056 2264 7.118723 AGAGAAAAATAAGGACATATGCCACA 58.881 34.615 15.63 5.86 0.00 4.17
2057 2265 7.573968 AGAGAAAAATAAGGACATATGCCAC 57.426 36.000 15.63 2.20 0.00 5.01
2058 2266 7.285401 GGAAGAGAAAAATAAGGACATATGCCA 59.715 37.037 15.63 0.47 0.00 4.92
2059 2267 7.503902 AGGAAGAGAAAAATAAGGACATATGCC 59.496 37.037 1.58 5.36 0.00 4.40
2060 2268 8.457238 AGGAAGAGAAAAATAAGGACATATGC 57.543 34.615 1.58 0.00 0.00 3.14
2064 2272 9.593565 AAGAAAGGAAGAGAAAAATAAGGACAT 57.406 29.630 0.00 0.00 0.00 3.06
2065 2273 8.996651 AAGAAAGGAAGAGAAAAATAAGGACA 57.003 30.769 0.00 0.00 0.00 4.02
2066 2274 9.290988 AGAAGAAAGGAAGAGAAAAATAAGGAC 57.709 33.333 0.00 0.00 0.00 3.85
2067 2275 9.508642 GAGAAGAAAGGAAGAGAAAAATAAGGA 57.491 33.333 0.00 0.00 0.00 3.36
2068 2276 9.513906 AGAGAAGAAAGGAAGAGAAAAATAAGG 57.486 33.333 0.00 0.00 0.00 2.69
2070 2278 9.508642 GGAGAGAAGAAAGGAAGAGAAAAATAA 57.491 33.333 0.00 0.00 0.00 1.40
2071 2279 8.660435 TGGAGAGAAGAAAGGAAGAGAAAAATA 58.340 33.333 0.00 0.00 0.00 1.40
2072 2280 7.446931 GTGGAGAGAAGAAAGGAAGAGAAAAAT 59.553 37.037 0.00 0.00 0.00 1.82
2073 2281 6.768381 GTGGAGAGAAGAAAGGAAGAGAAAAA 59.232 38.462 0.00 0.00 0.00 1.94
2074 2282 6.126768 TGTGGAGAGAAGAAAGGAAGAGAAAA 60.127 38.462 0.00 0.00 0.00 2.29
2075 2283 5.366768 TGTGGAGAGAAGAAAGGAAGAGAAA 59.633 40.000 0.00 0.00 0.00 2.52
2076 2284 4.901849 TGTGGAGAGAAGAAAGGAAGAGAA 59.098 41.667 0.00 0.00 0.00 2.87
2077 2285 4.483950 TGTGGAGAGAAGAAAGGAAGAGA 58.516 43.478 0.00 0.00 0.00 3.10
2078 2286 4.881019 TGTGGAGAGAAGAAAGGAAGAG 57.119 45.455 0.00 0.00 0.00 2.85
2079 2287 4.656112 AGTTGTGGAGAGAAGAAAGGAAGA 59.344 41.667 0.00 0.00 0.00 2.87
2080 2288 4.967036 AGTTGTGGAGAGAAGAAAGGAAG 58.033 43.478 0.00 0.00 0.00 3.46
2081 2289 5.602978 AGTAGTTGTGGAGAGAAGAAAGGAA 59.397 40.000 0.00 0.00 0.00 3.36
2082 2290 5.148502 AGTAGTTGTGGAGAGAAGAAAGGA 58.851 41.667 0.00 0.00 0.00 3.36
2083 2291 5.474825 GAGTAGTTGTGGAGAGAAGAAAGG 58.525 45.833 0.00 0.00 0.00 3.11
2084 2292 5.474825 GGAGTAGTTGTGGAGAGAAGAAAG 58.525 45.833 0.00 0.00 0.00 2.62
2085 2293 4.283722 GGGAGTAGTTGTGGAGAGAAGAAA 59.716 45.833 0.00 0.00 0.00 2.52
2086 2294 3.833070 GGGAGTAGTTGTGGAGAGAAGAA 59.167 47.826 0.00 0.00 0.00 2.52
2087 2295 3.076182 AGGGAGTAGTTGTGGAGAGAAGA 59.924 47.826 0.00 0.00 0.00 2.87
2088 2296 3.436243 AGGGAGTAGTTGTGGAGAGAAG 58.564 50.000 0.00 0.00 0.00 2.85
2089 2297 3.432378 GAGGGAGTAGTTGTGGAGAGAA 58.568 50.000 0.00 0.00 0.00 2.87
2090 2298 2.291670 GGAGGGAGTAGTTGTGGAGAGA 60.292 54.545 0.00 0.00 0.00 3.10
2091 2299 2.104170 GGAGGGAGTAGTTGTGGAGAG 58.896 57.143 0.00 0.00 0.00 3.20
2092 2300 1.616187 CGGAGGGAGTAGTTGTGGAGA 60.616 57.143 0.00 0.00 0.00 3.71
2093 2301 0.818296 CGGAGGGAGTAGTTGTGGAG 59.182 60.000 0.00 0.00 0.00 3.86
2094 2302 0.113776 ACGGAGGGAGTAGTTGTGGA 59.886 55.000 0.00 0.00 0.00 4.02
2095 2303 0.531200 GACGGAGGGAGTAGTTGTGG 59.469 60.000 0.00 0.00 0.00 4.17
2096 2304 0.531200 GGACGGAGGGAGTAGTTGTG 59.469 60.000 0.00 0.00 0.00 3.33
2097 2305 0.113776 TGGACGGAGGGAGTAGTTGT 59.886 55.000 0.00 0.00 0.00 3.32
2098 2306 0.818296 CTGGACGGAGGGAGTAGTTG 59.182 60.000 0.00 0.00 0.00 3.16
2099 2307 0.408700 ACTGGACGGAGGGAGTAGTT 59.591 55.000 0.00 0.00 0.00 2.24
2100 2308 0.323542 CACTGGACGGAGGGAGTAGT 60.324 60.000 0.00 0.00 0.00 2.73
2101 2309 0.034380 TCACTGGACGGAGGGAGTAG 60.034 60.000 0.00 0.00 0.00 2.57
2102 2310 0.406750 TTCACTGGACGGAGGGAGTA 59.593 55.000 0.00 0.00 0.00 2.59
2103 2311 0.471211 TTTCACTGGACGGAGGGAGT 60.471 55.000 0.00 0.00 0.00 3.85
2104 2312 0.685097 TTTTCACTGGACGGAGGGAG 59.315 55.000 0.00 0.00 0.00 4.30
2105 2313 0.685097 CTTTTCACTGGACGGAGGGA 59.315 55.000 0.00 0.00 0.00 4.20
2106 2314 0.396811 ACTTTTCACTGGACGGAGGG 59.603 55.000 0.00 0.00 0.00 4.30
2107 2315 1.202651 ACACTTTTCACTGGACGGAGG 60.203 52.381 0.00 0.00 0.00 4.30
2108 2316 2.240493 ACACTTTTCACTGGACGGAG 57.760 50.000 0.00 0.00 0.00 4.63
2109 2317 2.431419 TGTACACTTTTCACTGGACGGA 59.569 45.455 0.00 0.00 0.00 4.69
2110 2318 2.828877 TGTACACTTTTCACTGGACGG 58.171 47.619 0.00 0.00 0.00 4.79
2111 2319 7.821595 TTATATGTACACTTTTCACTGGACG 57.178 36.000 0.00 0.00 0.00 4.79
2135 2343 9.942850 CCACTCCATAATTTGTCCTAAAATTTT 57.057 29.630 8.75 8.75 39.73 1.82
2136 2344 9.320295 TCCACTCCATAATTTGTCCTAAAATTT 57.680 29.630 0.70 0.00 39.73 1.82
2137 2345 8.893563 TCCACTCCATAATTTGTCCTAAAATT 57.106 30.769 1.08 1.08 41.45 1.82
2138 2346 8.116026 ACTCCACTCCATAATTTGTCCTAAAAT 58.884 33.333 0.00 0.00 0.00 1.82
2139 2347 7.466804 ACTCCACTCCATAATTTGTCCTAAAA 58.533 34.615 0.00 0.00 0.00 1.52
2140 2348 7.027874 ACTCCACTCCATAATTTGTCCTAAA 57.972 36.000 0.00 0.00 0.00 1.85
2141 2349 6.214615 TGACTCCACTCCATAATTTGTCCTAA 59.785 38.462 0.00 0.00 0.00 2.69
2142 2350 5.724370 TGACTCCACTCCATAATTTGTCCTA 59.276 40.000 0.00 0.00 0.00 2.94
2143 2351 4.536090 TGACTCCACTCCATAATTTGTCCT 59.464 41.667 0.00 0.00 0.00 3.85
2144 2352 4.843728 TGACTCCACTCCATAATTTGTCC 58.156 43.478 0.00 0.00 0.00 4.02
2145 2353 6.817765 TTTGACTCCACTCCATAATTTGTC 57.182 37.500 0.00 0.00 0.00 3.18
2146 2354 7.595819 TTTTTGACTCCACTCCATAATTTGT 57.404 32.000 0.00 0.00 0.00 2.83
2147 2355 7.063780 GCATTTTTGACTCCACTCCATAATTTG 59.936 37.037 0.00 0.00 0.00 2.32
2148 2356 7.099120 GCATTTTTGACTCCACTCCATAATTT 58.901 34.615 0.00 0.00 0.00 1.82
2149 2357 6.211184 TGCATTTTTGACTCCACTCCATAATT 59.789 34.615 0.00 0.00 0.00 1.40
2150 2358 5.716228 TGCATTTTTGACTCCACTCCATAAT 59.284 36.000 0.00 0.00 0.00 1.28
2151 2359 5.048083 GTGCATTTTTGACTCCACTCCATAA 60.048 40.000 0.00 0.00 0.00 1.90
2152 2360 4.458989 GTGCATTTTTGACTCCACTCCATA 59.541 41.667 0.00 0.00 0.00 2.74
2153 2361 3.256631 GTGCATTTTTGACTCCACTCCAT 59.743 43.478 0.00 0.00 0.00 3.41
2154 2362 2.622942 GTGCATTTTTGACTCCACTCCA 59.377 45.455 0.00 0.00 0.00 3.86
2155 2363 2.887152 AGTGCATTTTTGACTCCACTCC 59.113 45.455 0.00 0.00 0.00 3.85
2156 2364 4.154918 CCTAGTGCATTTTTGACTCCACTC 59.845 45.833 0.00 0.00 35.42 3.51
2157 2365 4.074970 CCTAGTGCATTTTTGACTCCACT 58.925 43.478 0.00 0.00 37.34 4.00
2158 2366 4.072131 TCCTAGTGCATTTTTGACTCCAC 58.928 43.478 0.00 0.00 0.00 4.02
2159 2367 4.365514 TCCTAGTGCATTTTTGACTCCA 57.634 40.909 0.00 0.00 0.00 3.86
2160 2368 5.003804 TCTTCCTAGTGCATTTTTGACTCC 58.996 41.667 0.00 0.00 0.00 3.85
2161 2369 6.549952 CATCTTCCTAGTGCATTTTTGACTC 58.450 40.000 0.00 0.00 0.00 3.36
2162 2370 5.105997 GCATCTTCCTAGTGCATTTTTGACT 60.106 40.000 0.00 0.00 38.68 3.41
2163 2371 5.098211 GCATCTTCCTAGTGCATTTTTGAC 58.902 41.667 0.00 0.00 38.68 3.18
2164 2372 4.766373 TGCATCTTCCTAGTGCATTTTTGA 59.234 37.500 1.10 0.00 43.30 2.69
2165 2373 5.063180 TGCATCTTCCTAGTGCATTTTTG 57.937 39.130 1.10 0.00 43.30 2.44
2166 2374 5.717119 CTTGCATCTTCCTAGTGCATTTTT 58.283 37.500 5.87 0.00 46.90 1.94
2167 2375 4.381292 GCTTGCATCTTCCTAGTGCATTTT 60.381 41.667 5.87 0.00 46.90 1.82
2168 2376 3.129988 GCTTGCATCTTCCTAGTGCATTT 59.870 43.478 5.87 0.00 46.90 2.32
2169 2377 2.686915 GCTTGCATCTTCCTAGTGCATT 59.313 45.455 5.87 0.00 46.90 3.56
2170 2378 2.295885 GCTTGCATCTTCCTAGTGCAT 58.704 47.619 5.87 0.00 46.90 3.96
2171 2379 1.679944 GGCTTGCATCTTCCTAGTGCA 60.680 52.381 1.10 1.10 46.15 4.57
2172 2380 1.020437 GGCTTGCATCTTCCTAGTGC 58.980 55.000 0.00 0.00 39.26 4.40
2173 2381 2.012673 GTGGCTTGCATCTTCCTAGTG 58.987 52.381 0.00 0.00 0.00 2.74
2174 2382 1.065126 GGTGGCTTGCATCTTCCTAGT 60.065 52.381 0.00 0.00 0.00 2.57
2175 2383 1.065199 TGGTGGCTTGCATCTTCCTAG 60.065 52.381 0.00 0.00 0.00 3.02
2176 2384 0.991146 TGGTGGCTTGCATCTTCCTA 59.009 50.000 0.00 0.00 0.00 2.94
2177 2385 0.333993 ATGGTGGCTTGCATCTTCCT 59.666 50.000 0.00 0.00 0.00 3.36
2178 2386 0.743097 GATGGTGGCTTGCATCTTCC 59.257 55.000 0.00 0.00 0.00 3.46
2179 2387 1.674962 GAGATGGTGGCTTGCATCTTC 59.325 52.381 0.00 0.00 34.87 2.87
2180 2388 1.284198 AGAGATGGTGGCTTGCATCTT 59.716 47.619 0.00 0.00 34.87 2.40
2181 2389 0.917533 AGAGATGGTGGCTTGCATCT 59.082 50.000 0.00 0.00 37.14 2.90
2182 2390 1.307097 GAGAGATGGTGGCTTGCATC 58.693 55.000 0.00 0.00 0.00 3.91
2183 2391 0.622136 TGAGAGATGGTGGCTTGCAT 59.378 50.000 0.00 0.00 0.00 3.96
2184 2392 0.321919 GTGAGAGATGGTGGCTTGCA 60.322 55.000 0.00 0.00 0.00 4.08
2185 2393 1.028868 GGTGAGAGATGGTGGCTTGC 61.029 60.000 0.00 0.00 0.00 4.01
2186 2394 0.393537 GGGTGAGAGATGGTGGCTTG 60.394 60.000 0.00 0.00 0.00 4.01
2187 2395 1.566298 GGGGTGAGAGATGGTGGCTT 61.566 60.000 0.00 0.00 0.00 4.35
2188 2396 1.997874 GGGGTGAGAGATGGTGGCT 60.998 63.158 0.00 0.00 0.00 4.75
2189 2397 2.592308 GGGGTGAGAGATGGTGGC 59.408 66.667 0.00 0.00 0.00 5.01
2190 2398 3.324713 GGGGGTGAGAGATGGTGG 58.675 66.667 0.00 0.00 0.00 4.61
2204 2412 1.097547 CGCACTTAGCTCATTGGGGG 61.098 60.000 0.00 0.00 42.61 5.40
2205 2413 0.392998 ACGCACTTAGCTCATTGGGG 60.393 55.000 7.14 0.00 42.61 4.96
2206 2414 0.729116 CACGCACTTAGCTCATTGGG 59.271 55.000 0.00 0.00 42.61 4.12
2207 2415 1.442769 ACACGCACTTAGCTCATTGG 58.557 50.000 0.00 0.00 42.61 3.16
2208 2416 2.993220 TGTACACGCACTTAGCTCATTG 59.007 45.455 0.00 0.00 42.61 2.82
2209 2417 3.313012 TGTACACGCACTTAGCTCATT 57.687 42.857 0.00 0.00 42.61 2.57
2210 2418 3.313012 TTGTACACGCACTTAGCTCAT 57.687 42.857 0.00 0.00 42.61 2.90
2211 2419 2.804697 TTGTACACGCACTTAGCTCA 57.195 45.000 0.00 0.00 42.61 4.26
2212 2420 4.663636 AATTTGTACACGCACTTAGCTC 57.336 40.909 0.00 0.00 42.61 4.09
2213 2421 5.121768 CCTTAATTTGTACACGCACTTAGCT 59.878 40.000 0.00 0.00 42.61 3.32
2214 2422 5.121142 TCCTTAATTTGTACACGCACTTAGC 59.879 40.000 0.00 0.00 40.87 3.09
2215 2423 6.183360 CCTCCTTAATTTGTACACGCACTTAG 60.183 42.308 0.00 0.00 0.00 2.18
2216 2424 5.640357 CCTCCTTAATTTGTACACGCACTTA 59.360 40.000 0.00 0.00 0.00 2.24
2217 2425 4.454504 CCTCCTTAATTTGTACACGCACTT 59.545 41.667 0.00 0.00 0.00 3.16
2218 2426 4.000988 CCTCCTTAATTTGTACACGCACT 58.999 43.478 0.00 0.00 0.00 4.40
2219 2427 3.425758 GCCTCCTTAATTTGTACACGCAC 60.426 47.826 0.00 0.00 0.00 5.34
2220 2428 2.745281 GCCTCCTTAATTTGTACACGCA 59.255 45.455 0.00 0.00 0.00 5.24
2221 2429 2.096980 GGCCTCCTTAATTTGTACACGC 59.903 50.000 0.00 0.00 0.00 5.34
2222 2430 3.340034 TGGCCTCCTTAATTTGTACACG 58.660 45.455 3.32 0.00 0.00 4.49
2223 2431 4.705023 ACATGGCCTCCTTAATTTGTACAC 59.295 41.667 3.32 0.00 0.00 2.90
2224 2432 4.704540 CACATGGCCTCCTTAATTTGTACA 59.295 41.667 3.32 0.00 0.00 2.90
2225 2433 4.705023 ACACATGGCCTCCTTAATTTGTAC 59.295 41.667 3.32 0.00 0.00 2.90
2226 2434 4.929479 ACACATGGCCTCCTTAATTTGTA 58.071 39.130 3.32 0.00 0.00 2.41
2227 2435 3.778265 ACACATGGCCTCCTTAATTTGT 58.222 40.909 3.32 0.00 0.00 2.83
2228 2436 5.192927 TCTACACATGGCCTCCTTAATTTG 58.807 41.667 3.32 0.00 0.00 2.32
2229 2437 5.450818 TCTACACATGGCCTCCTTAATTT 57.549 39.130 3.32 0.00 0.00 1.82
2230 2438 5.450818 TTCTACACATGGCCTCCTTAATT 57.549 39.130 3.32 0.00 0.00 1.40
2231 2439 5.103940 ACATTCTACACATGGCCTCCTTAAT 60.104 40.000 3.32 0.00 0.00 1.40
2232 2440 4.227300 ACATTCTACACATGGCCTCCTTAA 59.773 41.667 3.32 0.00 0.00 1.85
2233 2441 3.780294 ACATTCTACACATGGCCTCCTTA 59.220 43.478 3.32 0.00 0.00 2.69
2234 2442 2.578021 ACATTCTACACATGGCCTCCTT 59.422 45.455 3.32 0.00 0.00 3.36
2235 2443 2.200081 ACATTCTACACATGGCCTCCT 58.800 47.619 3.32 0.00 0.00 3.69
2236 2444 2.717639 ACATTCTACACATGGCCTCC 57.282 50.000 3.32 0.00 0.00 4.30
2237 2445 5.009010 CCAATAACATTCTACACATGGCCTC 59.991 44.000 3.32 0.00 0.00 4.70
2238 2446 4.889409 CCAATAACATTCTACACATGGCCT 59.111 41.667 3.32 0.00 0.00 5.19
2239 2447 4.644685 ACCAATAACATTCTACACATGGCC 59.355 41.667 0.00 0.00 0.00 5.36
2240 2448 5.590259 AGACCAATAACATTCTACACATGGC 59.410 40.000 0.00 0.00 0.00 4.40
2241 2449 7.630242 AAGACCAATAACATTCTACACATGG 57.370 36.000 0.00 0.00 0.00 3.66
2249 2457 8.889717 CACGGTAATTAAGACCAATAACATTCT 58.110 33.333 9.40 0.00 36.72 2.40
2250 2458 8.671028 ACACGGTAATTAAGACCAATAACATTC 58.329 33.333 9.40 0.00 36.72 2.67
2251 2459 8.455682 CACACGGTAATTAAGACCAATAACATT 58.544 33.333 9.40 0.00 36.72 2.71
2252 2460 7.825270 TCACACGGTAATTAAGACCAATAACAT 59.175 33.333 9.40 0.00 36.72 2.71
2253 2461 7.160049 TCACACGGTAATTAAGACCAATAACA 58.840 34.615 9.40 0.00 36.72 2.41
2254 2462 7.599630 TCACACGGTAATTAAGACCAATAAC 57.400 36.000 9.40 0.00 36.72 1.89
2255 2463 8.041919 TCATCACACGGTAATTAAGACCAATAA 58.958 33.333 9.40 0.00 36.72 1.40
2256 2464 7.557724 TCATCACACGGTAATTAAGACCAATA 58.442 34.615 9.40 0.00 36.72 1.90
2257 2465 6.411376 TCATCACACGGTAATTAAGACCAAT 58.589 36.000 9.40 0.00 36.72 3.16
2258 2466 5.795972 TCATCACACGGTAATTAAGACCAA 58.204 37.500 9.40 0.00 36.72 3.67
2259 2467 5.186215 TCTCATCACACGGTAATTAAGACCA 59.814 40.000 9.40 0.00 36.72 4.02
2260 2468 5.657474 TCTCATCACACGGTAATTAAGACC 58.343 41.667 0.08 0.08 0.00 3.85
2261 2469 6.561614 TCTCTCATCACACGGTAATTAAGAC 58.438 40.000 0.00 0.00 0.00 3.01
2262 2470 6.769134 TCTCTCATCACACGGTAATTAAGA 57.231 37.500 0.00 0.00 0.00 2.10
2263 2471 7.827819 TTTCTCTCATCACACGGTAATTAAG 57.172 36.000 0.00 0.00 0.00 1.85
2264 2472 7.876068 ACTTTTCTCTCATCACACGGTAATTAA 59.124 33.333 0.00 0.00 0.00 1.40
2265 2473 7.383687 ACTTTTCTCTCATCACACGGTAATTA 58.616 34.615 0.00 0.00 0.00 1.40
2266 2474 6.231211 ACTTTTCTCTCATCACACGGTAATT 58.769 36.000 0.00 0.00 0.00 1.40
2267 2475 5.794894 ACTTTTCTCTCATCACACGGTAAT 58.205 37.500 0.00 0.00 0.00 1.89
2268 2476 5.209818 ACTTTTCTCTCATCACACGGTAA 57.790 39.130 0.00 0.00 0.00 2.85
2269 2477 4.866508 ACTTTTCTCTCATCACACGGTA 57.133 40.909 0.00 0.00 0.00 4.02
2270 2478 3.753294 ACTTTTCTCTCATCACACGGT 57.247 42.857 0.00 0.00 0.00 4.83
2271 2479 9.698309 ATATAATACTTTTCTCTCATCACACGG 57.302 33.333 0.00 0.00 0.00 4.94
2288 2496 9.531158 GTGTACCTCTACCTTCCATATAATACT 57.469 37.037 0.00 0.00 0.00 2.12
2289 2497 9.531158 AGTGTACCTCTACCTTCCATATAATAC 57.469 37.037 0.00 0.00 0.00 1.89
2290 2498 9.750783 GAGTGTACCTCTACCTTCCATATAATA 57.249 37.037 4.62 0.00 37.22 0.98
2291 2499 8.653036 GAGTGTACCTCTACCTTCCATATAAT 57.347 38.462 4.62 0.00 37.22 1.28
2306 2514 4.067972 TGTCCACAAAAGAGTGTACCTC 57.932 45.455 3.84 3.84 40.80 3.85
2307 2515 4.497291 TTGTCCACAAAAGAGTGTACCT 57.503 40.909 0.00 0.00 37.82 3.08
2316 2524 7.574592 TTTGGCTTCAAAATTTGTCCACAAAAG 60.575 33.333 8.88 2.64 40.58 2.27
2317 2525 6.207417 TTTGGCTTCAAAATTTGTCCACAAAA 59.793 30.769 8.88 2.12 40.58 2.44
2318 2526 5.707298 TTTGGCTTCAAAATTTGTCCACAAA 59.293 32.000 7.32 7.32 40.97 2.83
2319 2527 4.478206 TGGCTTCAAAATTTGTCCACAA 57.522 36.364 5.56 0.00 0.00 3.33
2320 2528 4.478206 TTGGCTTCAAAATTTGTCCACA 57.522 36.364 5.56 0.00 0.00 4.17
2321 2529 4.260172 CGTTTGGCTTCAAAATTTGTCCAC 60.260 41.667 5.56 1.78 41.43 4.02
2322 2530 3.868077 CGTTTGGCTTCAAAATTTGTCCA 59.132 39.130 5.56 8.83 41.43 4.02
2323 2531 3.868661 ACGTTTGGCTTCAAAATTTGTCC 59.131 39.130 5.56 6.55 41.43 4.02
2324 2532 5.517054 TGTACGTTTGGCTTCAAAATTTGTC 59.483 36.000 5.56 0.00 41.43 3.18
2325 2533 5.289917 GTGTACGTTTGGCTTCAAAATTTGT 59.710 36.000 5.56 0.00 41.43 2.83
2326 2534 5.518487 AGTGTACGTTTGGCTTCAAAATTTG 59.482 36.000 0.00 0.00 41.43 2.32
2327 2535 5.656480 AGTGTACGTTTGGCTTCAAAATTT 58.344 33.333 0.00 0.00 41.43 1.82
2328 2536 5.067283 AGAGTGTACGTTTGGCTTCAAAATT 59.933 36.000 0.00 0.00 41.43 1.82
2329 2537 4.578928 AGAGTGTACGTTTGGCTTCAAAAT 59.421 37.500 0.00 0.00 41.43 1.82
2330 2538 3.942748 AGAGTGTACGTTTGGCTTCAAAA 59.057 39.130 0.00 0.00 41.43 2.44
2331 2539 3.537580 AGAGTGTACGTTTGGCTTCAAA 58.462 40.909 0.00 0.00 37.97 2.69
2332 2540 3.188159 AGAGTGTACGTTTGGCTTCAA 57.812 42.857 0.00 0.00 0.00 2.69
2333 2541 2.902705 AGAGTGTACGTTTGGCTTCA 57.097 45.000 0.00 0.00 0.00 3.02
2334 2542 3.128349 TGAAGAGTGTACGTTTGGCTTC 58.872 45.455 0.00 2.17 0.00 3.86
2335 2543 3.188159 TGAAGAGTGTACGTTTGGCTT 57.812 42.857 0.00 0.00 0.00 4.35
2336 2544 2.902705 TGAAGAGTGTACGTTTGGCT 57.097 45.000 0.00 0.00 0.00 4.75
2337 2545 3.064207 TGATGAAGAGTGTACGTTTGGC 58.936 45.455 0.00 0.00 0.00 4.52
2338 2546 4.386049 GTCTGATGAAGAGTGTACGTTTGG 59.614 45.833 0.00 0.00 34.84 3.28
2339 2547 4.088638 CGTCTGATGAAGAGTGTACGTTTG 59.911 45.833 0.00 0.00 34.84 2.93
2340 2548 4.227538 CGTCTGATGAAGAGTGTACGTTT 58.772 43.478 0.00 0.00 34.84 3.60
2341 2549 3.366070 CCGTCTGATGAAGAGTGTACGTT 60.366 47.826 0.00 0.00 34.84 3.99
2342 2550 2.161808 CCGTCTGATGAAGAGTGTACGT 59.838 50.000 0.00 0.00 34.84 3.57
2343 2551 2.418976 TCCGTCTGATGAAGAGTGTACG 59.581 50.000 0.00 0.00 34.84 3.67
2344 2552 3.732471 GCTCCGTCTGATGAAGAGTGTAC 60.732 52.174 0.00 0.00 34.84 2.90
2345 2553 2.423892 GCTCCGTCTGATGAAGAGTGTA 59.576 50.000 0.00 0.00 34.84 2.90
2346 2554 1.203523 GCTCCGTCTGATGAAGAGTGT 59.796 52.381 0.00 0.00 34.84 3.55
2347 2555 1.796982 CGCTCCGTCTGATGAAGAGTG 60.797 57.143 0.00 0.88 34.84 3.51
2348 2556 0.453793 CGCTCCGTCTGATGAAGAGT 59.546 55.000 0.00 0.00 34.84 3.24
2349 2557 0.735471 TCGCTCCGTCTGATGAAGAG 59.265 55.000 0.00 0.00 34.84 2.85
2350 2558 0.735471 CTCGCTCCGTCTGATGAAGA 59.265 55.000 0.00 0.00 0.00 2.87
2351 2559 0.453793 ACTCGCTCCGTCTGATGAAG 59.546 55.000 0.00 0.00 0.00 3.02
2352 2560 1.671328 CTACTCGCTCCGTCTGATGAA 59.329 52.381 0.00 0.00 0.00 2.57
2353 2561 1.300481 CTACTCGCTCCGTCTGATGA 58.700 55.000 0.00 0.00 0.00 2.92
2354 2562 0.309302 CCTACTCGCTCCGTCTGATG 59.691 60.000 0.00 0.00 0.00 3.07
2355 2563 0.107116 ACCTACTCGCTCCGTCTGAT 60.107 55.000 0.00 0.00 0.00 2.90
2356 2564 0.322277 AACCTACTCGCTCCGTCTGA 60.322 55.000 0.00 0.00 0.00 3.27
2357 2565 1.063764 GTAACCTACTCGCTCCGTCTG 59.936 57.143 0.00 0.00 0.00 3.51
2358 2566 1.339438 TGTAACCTACTCGCTCCGTCT 60.339 52.381 0.00 0.00 0.00 4.18
2359 2567 1.089920 TGTAACCTACTCGCTCCGTC 58.910 55.000 0.00 0.00 0.00 4.79
2360 2568 1.538047 TTGTAACCTACTCGCTCCGT 58.462 50.000 0.00 0.00 0.00 4.69
2361 2569 2.642139 TTTGTAACCTACTCGCTCCG 57.358 50.000 0.00 0.00 0.00 4.63
2362 2570 3.858247 ACATTTGTAACCTACTCGCTCC 58.142 45.455 0.00 0.00 0.00 4.70
2363 2571 4.927425 TCAACATTTGTAACCTACTCGCTC 59.073 41.667 0.00 0.00 0.00 5.03
2364 2572 4.890088 TCAACATTTGTAACCTACTCGCT 58.110 39.130 0.00 0.00 0.00 4.93
2365 2573 4.927425 TCTCAACATTTGTAACCTACTCGC 59.073 41.667 0.00 0.00 0.00 5.03
2366 2574 6.455646 GCATCTCAACATTTGTAACCTACTCG 60.456 42.308 0.00 0.00 0.00 4.18
2367 2575 6.371548 TGCATCTCAACATTTGTAACCTACTC 59.628 38.462 0.00 0.00 0.00 2.59
2368 2576 6.237901 TGCATCTCAACATTTGTAACCTACT 58.762 36.000 0.00 0.00 0.00 2.57
2369 2577 6.494893 TGCATCTCAACATTTGTAACCTAC 57.505 37.500 0.00 0.00 0.00 3.18
2370 2578 7.517614 TTTGCATCTCAACATTTGTAACCTA 57.482 32.000 0.00 0.00 33.73 3.08
2371 2579 6.403866 TTTGCATCTCAACATTTGTAACCT 57.596 33.333 0.00 0.00 33.73 3.50
2372 2580 7.437862 TCTTTTTGCATCTCAACATTTGTAACC 59.562 33.333 0.00 0.00 33.73 2.85
2373 2581 8.351495 TCTTTTTGCATCTCAACATTTGTAAC 57.649 30.769 0.00 0.00 33.73 2.50
2375 2583 9.624697 GTATCTTTTTGCATCTCAACATTTGTA 57.375 29.630 0.00 0.00 33.73 2.41
2376 2584 8.362639 AGTATCTTTTTGCATCTCAACATTTGT 58.637 29.630 0.00 0.00 33.73 2.83
2377 2585 8.752766 AGTATCTTTTTGCATCTCAACATTTG 57.247 30.769 0.00 0.00 33.73 2.32
2381 2589 9.897744 CTTTAAGTATCTTTTTGCATCTCAACA 57.102 29.630 0.00 0.00 33.73 3.33
2382 2590 9.899226 ACTTTAAGTATCTTTTTGCATCTCAAC 57.101 29.630 0.00 0.00 33.73 3.18
2413 2621 8.421002 GGGTGGTATTTAAGTGATATTGCATTT 58.579 33.333 0.00 0.00 0.00 2.32
2414 2622 7.015195 GGGGTGGTATTTAAGTGATATTGCATT 59.985 37.037 0.00 0.00 0.00 3.56
2415 2623 6.493458 GGGGTGGTATTTAAGTGATATTGCAT 59.507 38.462 0.00 0.00 0.00 3.96
2416 2624 5.830991 GGGGTGGTATTTAAGTGATATTGCA 59.169 40.000 0.00 0.00 0.00 4.08
2417 2625 6.068670 AGGGGTGGTATTTAAGTGATATTGC 58.931 40.000 0.00 0.00 0.00 3.56
2418 2626 9.284968 CTTAGGGGTGGTATTTAAGTGATATTG 57.715 37.037 0.00 0.00 0.00 1.90
2419 2627 9.232882 TCTTAGGGGTGGTATTTAAGTGATATT 57.767 33.333 0.00 0.00 0.00 1.28
2420 2628 8.808240 TCTTAGGGGTGGTATTTAAGTGATAT 57.192 34.615 0.00 0.00 0.00 1.63
2421 2629 8.808240 ATCTTAGGGGTGGTATTTAAGTGATA 57.192 34.615 0.00 0.00 0.00 2.15
2422 2630 7.707467 ATCTTAGGGGTGGTATTTAAGTGAT 57.293 36.000 0.00 0.00 0.00 3.06
2423 2631 7.624478 TGTATCTTAGGGGTGGTATTTAAGTGA 59.376 37.037 0.00 0.00 0.00 3.41
2424 2632 7.798071 TGTATCTTAGGGGTGGTATTTAAGTG 58.202 38.462 0.00 0.00 0.00 3.16
2425 2633 8.396619 TTGTATCTTAGGGGTGGTATTTAAGT 57.603 34.615 0.00 0.00 0.00 2.24
2426 2634 9.284968 CATTGTATCTTAGGGGTGGTATTTAAG 57.715 37.037 0.00 0.00 0.00 1.85
2427 2635 7.722285 GCATTGTATCTTAGGGGTGGTATTTAA 59.278 37.037 0.00 0.00 0.00 1.52
2428 2636 7.147284 TGCATTGTATCTTAGGGGTGGTATTTA 60.147 37.037 0.00 0.00 0.00 1.40
2429 2637 6.068670 GCATTGTATCTTAGGGGTGGTATTT 58.931 40.000 0.00 0.00 0.00 1.40
2430 2638 5.133660 TGCATTGTATCTTAGGGGTGGTATT 59.866 40.000 0.00 0.00 0.00 1.89
2431 2639 4.663120 TGCATTGTATCTTAGGGGTGGTAT 59.337 41.667 0.00 0.00 0.00 2.73
2432 2640 4.041464 TGCATTGTATCTTAGGGGTGGTA 58.959 43.478 0.00 0.00 0.00 3.25
2433 2641 2.849943 TGCATTGTATCTTAGGGGTGGT 59.150 45.455 0.00 0.00 0.00 4.16
2434 2642 3.576078 TGCATTGTATCTTAGGGGTGG 57.424 47.619 0.00 0.00 0.00 4.61
2435 2643 5.443185 CAATGCATTGTATCTTAGGGGTG 57.557 43.478 27.81 1.16 33.22 4.61
2448 2656 4.171005 GAGACAATCACCACAATGCATTG 58.829 43.478 32.74 32.74 43.26 2.82
2449 2657 3.194116 GGAGACAATCACCACAATGCATT 59.806 43.478 5.99 5.99 0.00 3.56
2450 2658 2.756760 GGAGACAATCACCACAATGCAT 59.243 45.455 0.00 0.00 0.00 3.96
2451 2659 2.161855 GGAGACAATCACCACAATGCA 58.838 47.619 0.00 0.00 0.00 3.96
2452 2660 2.440409 AGGAGACAATCACCACAATGC 58.560 47.619 0.00 0.00 28.86 3.56


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.