Multiple sequence alignment - TraesCS2B01G319800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G319800 chr2B 100.000 6518 0 0 1 6518 456022602 456029119 0.000000e+00 12037.0
1 TraesCS2B01G319800 chr2B 95.614 114 4 1 5929 6041 456028379 456028492 1.440000e-41 182.0
2 TraesCS2B01G319800 chr2B 95.614 114 4 1 5778 5891 456028530 456028642 1.440000e-41 182.0
3 TraesCS2B01G319800 chr2D 94.408 5526 182 49 1 5474 385164927 385170377 0.000000e+00 8375.0
4 TraesCS2B01G319800 chr2D 95.349 172 8 0 6092 6263 19006824 19006995 2.320000e-69 274.0
5 TraesCS2B01G319800 chr2A 96.495 3452 102 7 1196 4639 520307911 520311351 0.000000e+00 5686.0
6 TraesCS2B01G319800 chr2A 91.611 906 36 8 280 1152 520306727 520307625 0.000000e+00 1216.0
7 TraesCS2B01G319800 chr2A 91.677 817 22 14 4688 5478 520311652 520312448 0.000000e+00 1090.0
8 TraesCS2B01G319800 chr2A 95.349 172 8 0 6092 6263 80918121 80917950 2.320000e-69 274.0
9 TraesCS2B01G319800 chr2A 93.939 99 6 0 1 99 520303629 520303727 4.070000e-32 150.0
10 TraesCS2B01G319800 chr2A 91.892 74 5 1 3345 3418 704364911 704364983 1.160000e-17 102.0
11 TraesCS2B01G319800 chr6A 85.669 314 40 4 1430 1743 214806030 214805722 6.300000e-85 326.0
12 TraesCS2B01G319800 chr6A 86.022 93 13 0 1501 1593 250711015 250711107 4.160000e-17 100.0
13 TraesCS2B01G319800 chr3A 85.266 319 40 5 1430 1745 573516097 573515783 8.150000e-84 322.0
14 TraesCS2B01G319800 chr3A 93.243 74 4 1 3345 3418 182540949 182541021 2.490000e-19 108.0
15 TraesCS2B01G319800 chr3A 87.912 91 10 1 3328 3418 554204797 554204708 8.940000e-19 106.0
16 TraesCS2B01G319800 chr1D 95.135 185 8 1 6092 6276 62800261 62800444 2.300000e-74 291.0
17 TraesCS2B01G319800 chr1A 80.401 449 33 25 5478 5891 338580404 338579976 2.300000e-74 291.0
18 TraesCS2B01G319800 chr1A 95.349 172 8 0 6092 6263 14128268 14128439 2.320000e-69 274.0
19 TraesCS2B01G319800 chr1A 88.017 242 16 6 6264 6505 338579888 338579660 2.320000e-69 274.0
20 TraesCS2B01G319800 chr1A 87.379 206 22 3 5892 6093 338580126 338579921 3.930000e-57 233.0
21 TraesCS2B01G319800 chr1A 91.892 74 5 1 3345 3418 241305235 241305163 1.160000e-17 102.0
22 TraesCS2B01G319800 chr6D 95.930 172 7 0 6092 6263 273973782 273973953 4.980000e-71 279.0
23 TraesCS2B01G319800 chr6D 86.458 96 13 0 1501 1596 200495104 200495009 8.940000e-19 106.0
24 TraesCS2B01G319800 chr4B 95.429 175 8 0 6092 6266 3335484 3335658 4.980000e-71 279.0
25 TraesCS2B01G319800 chr4B 95.349 172 8 0 6092 6263 483761862 483761691 2.320000e-69 274.0
26 TraesCS2B01G319800 chr4B 82.031 128 14 7 1444 1569 122222095 122222215 4.160000e-17 100.0
27 TraesCS2B01G319800 chr6B 95.349 172 8 0 6092 6263 272401580 272401751 2.320000e-69 274.0
28 TraesCS2B01G319800 chr6B 86.458 96 13 0 1501 1596 325043911 325043816 8.940000e-19 106.0
29 TraesCS2B01G319800 chr7A 94.828 174 9 0 6092 6265 10266482 10266655 8.330000e-69 272.0
30 TraesCS2B01G319800 chr5D 90.777 206 14 4 5893 6093 114348283 114348078 3.000000e-68 270.0
31 TraesCS2B01G319800 chr5D 89.573 211 17 3 6265 6472 114348044 114347836 5.010000e-66 263.0
32 TraesCS2B01G319800 chr5D 78.452 478 36 28 5480 5891 114348609 114348133 3.900000e-62 250.0
33 TraesCS2B01G319800 chr5D 100.000 29 0 0 6477 6505 114347884 114347856 3.000000e-03 54.7
34 TraesCS2B01G319800 chr5B 77.500 480 40 28 5477 5891 125227748 125227272 6.580000e-55 226.0
35 TraesCS2B01G319800 chr5B 86.275 204 21 6 5895 6092 125227420 125227218 1.420000e-51 215.0
36 TraesCS2B01G319800 chr4A 80.488 164 24 6 3259 3417 175906785 175906625 1.150000e-22 119.0
37 TraesCS2B01G319800 chr4A 87.500 96 8 4 3345 3438 249744622 249744529 2.490000e-19 108.0
38 TraesCS2B01G319800 chr3D 88.506 87 9 1 3336 3422 45065533 45065618 3.210000e-18 104.0
39 TraesCS2B01G319800 chr4D 95.238 63 2 1 1508 1569 85011703 85011765 1.500000e-16 99.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G319800 chr2B 456022602 456029119 6517 False 4133.666667 12037 97.076000 1 6518 3 chr2B.!!$F1 6517
1 TraesCS2B01G319800 chr2D 385164927 385170377 5450 False 8375.000000 8375 94.408000 1 5474 1 chr2D.!!$F2 5473
2 TraesCS2B01G319800 chr2A 520303629 520312448 8819 False 2035.500000 5686 93.430500 1 5478 4 chr2A.!!$F2 5477
3 TraesCS2B01G319800 chr1A 338579660 338580404 744 True 266.000000 291 85.265667 5478 6505 3 chr1A.!!$R2 1027
4 TraesCS2B01G319800 chr5D 114347836 114348609 773 True 209.425000 270 89.700500 5480 6505 4 chr5D.!!$R1 1025
5 TraesCS2B01G319800 chr5B 125227218 125227748 530 True 220.500000 226 81.887500 5477 6092 2 chr5B.!!$R1 615

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
744 3637 0.609151 TGAGTTCGCGGGAATACCAA 59.391 50.000 18.51 0.52 40.22 3.67 F
1993 5158 1.134670 GGGAGAGACCGACATCAAAGG 60.135 57.143 0.00 0.00 40.11 3.11 F
2760 5925 0.035317 AGGCTCAGCACGATTGTTCA 59.965 50.000 0.00 0.00 0.00 3.18 F
3379 6544 1.214305 ATCCCCTACTTGCCAAGCCA 61.214 55.000 3.88 0.00 0.00 4.75 F
4829 8293 1.072806 TCCAGAATGCTGTCAGTTGCT 59.927 47.619 0.00 0.00 40.63 3.91 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2233 5398 0.106819 GGCTTGTCATCTGAGGGCAT 60.107 55.000 0.00 0.00 0.00 4.40 R
3379 6544 1.263356 TAACTGGTAACTGCTCGGCT 58.737 50.000 0.00 0.00 39.52 5.52 R
3841 7009 1.521457 GCATAGTGCCACGCTGCTA 60.521 57.895 14.77 3.28 37.42 3.49 R
5307 8772 0.898320 CAGACCTTGTCCTCACGGAT 59.102 55.000 0.00 0.00 42.43 4.18 R
6190 9741 0.030369 GCATTGGCTAGAGCATGCAC 59.970 55.000 21.98 14.59 44.74 4.57 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
118 119 1.132453 GCAAGTGGCCCGAACTTAATC 59.868 52.381 6.63 0.00 35.70 1.75
119 120 2.432444 CAAGTGGCCCGAACTTAATCA 58.568 47.619 6.63 0.00 35.70 2.57
121 122 4.196193 CAAGTGGCCCGAACTTAATCATA 58.804 43.478 6.63 0.00 35.70 2.15
122 123 4.706842 AGTGGCCCGAACTTAATCATAT 57.293 40.909 0.00 0.00 0.00 1.78
123 124 4.389374 AGTGGCCCGAACTTAATCATATG 58.611 43.478 0.00 0.00 0.00 1.78
124 125 4.102524 AGTGGCCCGAACTTAATCATATGA 59.897 41.667 8.10 8.10 0.00 2.15
125 126 5.003804 GTGGCCCGAACTTAATCATATGAT 58.996 41.667 12.62 12.62 36.07 2.45
127 128 6.653320 GTGGCCCGAACTTAATCATATGATTA 59.347 38.462 27.09 27.09 42.48 1.75
201 3073 7.972623 AAGTAATCATACGAGAAACGAAGAG 57.027 36.000 0.00 0.00 45.77 2.85
217 3089 3.371097 GAGATGGCTGGCGTCCGAA 62.371 63.158 18.57 0.00 0.00 4.30
239 3111 3.745799 TGAAACGGAAATGGAACTAGCA 58.254 40.909 0.00 0.00 0.00 3.49
300 3175 3.766691 GCGAGTCGGCCCTTACCA 61.767 66.667 15.52 0.00 0.00 3.25
306 3181 3.076278 CGGCCCTTACCACCGGTA 61.076 66.667 6.87 0.00 43.23 4.02
336 3211 2.575993 CTCACCCTCGCTGTCCTG 59.424 66.667 0.00 0.00 0.00 3.86
412 3302 3.787001 GGTTGGAGGAGGAGCCGG 61.787 72.222 0.00 0.00 43.43 6.13
556 3446 2.652530 GTGGCGGAGAACGTGGTA 59.347 61.111 0.00 0.00 46.52 3.25
623 3514 1.850441 CGAGCTTATTACGTTGACGGG 59.150 52.381 8.52 0.00 44.95 5.28
694 3586 3.450115 CGTGGACGGAGGAGGGAC 61.450 72.222 0.00 0.00 35.37 4.46
744 3637 0.609151 TGAGTTCGCGGGAATACCAA 59.391 50.000 18.51 0.52 40.22 3.67
757 3650 5.756833 CGGGAATACCAACCAGAAATACTAC 59.243 44.000 0.00 0.00 40.22 2.73
758 3651 6.407752 CGGGAATACCAACCAGAAATACTACT 60.408 42.308 0.00 0.00 40.22 2.57
759 3652 6.990939 GGGAATACCAACCAGAAATACTACTC 59.009 42.308 0.00 0.00 39.85 2.59
760 3653 6.990939 GGAATACCAACCAGAAATACTACTCC 59.009 42.308 0.00 0.00 35.97 3.85
806 3699 9.909644 GATATTCCATTCTTTTCCATGAATCAG 57.090 33.333 0.00 0.00 31.35 2.90
807 3700 7.729124 ATTCCATTCTTTTCCATGAATCAGT 57.271 32.000 0.00 0.00 31.35 3.41
818 3711 3.373438 CCATGAATCAGTGGGAAGGGATT 60.373 47.826 0.00 0.00 32.97 3.01
877 3784 1.302192 GAGCGTGGCCAACCTAACA 60.302 57.895 7.24 0.00 36.63 2.41
1221 4380 4.722535 TGAGCCTCCGCCCTCCTT 62.723 66.667 0.00 0.00 34.57 3.36
1701 4866 1.585668 CGACAGCGTCTTGATGATGAC 59.414 52.381 13.98 7.60 37.44 3.06
1713 4878 4.866508 TGATGATGACTACGGTAATCCC 57.133 45.455 0.00 0.00 33.38 3.85
1722 4887 2.599032 GGTAATCCCAACCCCCGG 59.401 66.667 0.00 0.00 0.00 5.73
1857 5022 6.125561 ACAGGGAGAGGAGTAGGGATTATTTA 60.126 42.308 0.00 0.00 0.00 1.40
1884 5049 4.012374 GCCGGAATTATGGTGATGATGAT 58.988 43.478 5.05 0.00 0.00 2.45
1890 5055 6.944290 GGAATTATGGTGATGATGATGAGGAA 59.056 38.462 0.00 0.00 0.00 3.36
1983 5148 3.775654 GTGGCTGGGGAGAGACCG 61.776 72.222 0.00 0.00 40.11 4.79
1993 5158 1.134670 GGGAGAGACCGACATCAAAGG 60.135 57.143 0.00 0.00 40.11 3.11
2013 5178 3.775654 GAGGCTGTGGGGGAGTCG 61.776 72.222 0.00 0.00 0.00 4.18
2103 5268 5.775686 CAAGAGGTGCAAAATGAGAATGAA 58.224 37.500 0.00 0.00 0.00 2.57
2112 5277 9.017669 GTGCAAAATGAGAATGAAGCTAATAAG 57.982 33.333 0.00 0.00 0.00 1.73
2126 5291 7.398618 TGAAGCTAATAAGATGGAGGAGGATAG 59.601 40.741 0.00 0.00 0.00 2.08
2141 5306 6.206042 AGGAGGATAGTAAGGTGTCTGATTT 58.794 40.000 0.00 0.00 0.00 2.17
2142 5307 7.363031 AGGAGGATAGTAAGGTGTCTGATTTA 58.637 38.462 0.00 0.00 0.00 1.40
2233 5398 3.486383 GGGGAGATAAATCATTCGCCAA 58.514 45.455 9.23 0.00 41.01 4.52
2274 5439 6.675746 AGCCTGATGATGGTAGTATTATGGAT 59.324 38.462 0.00 0.00 0.00 3.41
2437 5602 4.899352 ATACCTGCTCATAGGAATGGAC 57.101 45.455 0.00 0.00 40.42 4.02
2504 5669 3.741249 CTCCTCTGATGGTGATTGATGG 58.259 50.000 0.00 0.00 0.00 3.51
2521 5686 1.246056 TGGAGCAGCAAATGACAGCC 61.246 55.000 0.00 0.00 0.00 4.85
2633 5798 3.004839 CACGTGAGACTCCAAGAAGAAGA 59.995 47.826 10.90 0.00 0.00 2.87
2651 5816 5.858381 AGAAGAAGCACAAACTGAGATACA 58.142 37.500 0.00 0.00 0.00 2.29
2743 5908 1.561643 TCCTACACTGGCTTCTCAGG 58.438 55.000 0.00 0.00 38.98 3.86
2744 5909 0.107945 CCTACACTGGCTTCTCAGGC 60.108 60.000 0.00 0.00 46.16 4.85
2745 5910 0.901124 CTACACTGGCTTCTCAGGCT 59.099 55.000 0.00 0.00 46.13 4.58
2746 5911 0.898320 TACACTGGCTTCTCAGGCTC 59.102 55.000 0.00 0.00 46.13 4.70
2747 5912 1.123861 ACACTGGCTTCTCAGGCTCA 61.124 55.000 0.00 0.00 46.13 4.26
2748 5913 0.391395 CACTGGCTTCTCAGGCTCAG 60.391 60.000 0.00 0.00 46.13 3.35
2760 5925 0.035317 AGGCTCAGCACGATTGTTCA 59.965 50.000 0.00 0.00 0.00 3.18
2770 5935 3.796178 GCACGATTGTTCAAAGCTTCAAA 59.204 39.130 0.00 0.00 0.00 2.69
2772 5937 5.387752 GCACGATTGTTCAAAGCTTCAAATC 60.388 40.000 0.00 4.69 0.00 2.17
2799 5964 8.470002 AGGGAAGAAGTGCAAATTTACAATATC 58.530 33.333 0.00 0.00 0.00 1.63
2878 6043 9.046296 CAACAGATAGTGTGGAATTATTACCTC 57.954 37.037 0.00 0.00 40.26 3.85
2912 6077 4.452455 AGAAGCTGTTGTCACGATAAAAGG 59.548 41.667 0.00 0.00 0.00 3.11
2925 6090 4.042435 ACGATAAAAGGGGAAGAACTTGGA 59.958 41.667 0.00 0.00 0.00 3.53
3036 6201 6.658816 AGTGCTCCAATGTTGTATGTTCAATA 59.341 34.615 0.00 0.00 0.00 1.90
3228 6393 1.765904 GTTCCTTCCTCCTCCCATCTC 59.234 57.143 0.00 0.00 0.00 2.75
3271 6436 9.023967 GCTGATAGCATTTTTCAAAATATCGTT 57.976 29.630 0.00 0.00 41.89 3.85
3313 6478 1.416401 GATTAATCCCTGCTCGGTGGA 59.584 52.381 3.92 0.00 0.00 4.02
3327 6492 3.065306 TGGACCACCAAGTAGCCG 58.935 61.111 0.00 0.00 43.91 5.52
3347 6512 3.188460 CCGATTAACTGATTTATGGGCCG 59.812 47.826 0.00 0.00 0.00 6.13
3379 6544 1.214305 ATCCCCTACTTGCCAAGCCA 61.214 55.000 3.88 0.00 0.00 4.75
3464 6629 9.097257 GAGTGAACATTTCATTTCCTTTTTGAA 57.903 29.630 0.00 0.00 42.47 2.69
3558 6726 2.555199 CCACTAGCCAGTTATCAGCAC 58.445 52.381 0.00 0.00 30.46 4.40
3675 6843 2.424601 GCCATCTTAGCATCAGCAACAA 59.575 45.455 0.00 0.00 45.49 2.83
3695 6863 9.372541 GCAACAACAAGATTTGTATTTTTCATG 57.627 29.630 0.00 0.00 44.59 3.07
3967 7135 3.368323 GGCCAAACCAATCATGTACAAGG 60.368 47.826 0.00 0.00 38.86 3.61
4296 7465 2.038033 GGTTTGCTGGTACTGGTAGTCA 59.962 50.000 0.00 0.00 0.00 3.41
4345 7514 8.150945 GGAGTTACCATCATAATGTCACATAGT 58.849 37.037 0.00 0.00 38.79 2.12
4604 7778 8.353423 AGCACTAAGGTTCAATTCATATTTGT 57.647 30.769 0.00 0.00 0.00 2.83
4680 7854 6.976925 CAGAAAAATGAGATAGTGGAAATGCC 59.023 38.462 0.00 0.00 37.10 4.40
4722 8178 3.134574 TCACTTTAGTCGGCAAACCAT 57.865 42.857 0.00 0.00 34.57 3.55
4723 8179 3.482436 TCACTTTAGTCGGCAAACCATT 58.518 40.909 0.00 0.00 34.57 3.16
4726 8182 4.214545 CACTTTAGTCGGCAAACCATTACA 59.785 41.667 0.00 0.00 34.57 2.41
4728 8184 4.752661 TTAGTCGGCAAACCATTACAAC 57.247 40.909 0.00 0.00 34.57 3.32
4730 8186 2.552315 AGTCGGCAAACCATTACAACTG 59.448 45.455 0.00 0.00 34.57 3.16
4732 8188 1.883275 CGGCAAACCATTACAACTGGA 59.117 47.619 0.00 0.00 37.22 3.86
4829 8293 1.072806 TCCAGAATGCTGTCAGTTGCT 59.927 47.619 0.00 0.00 40.63 3.91
4912 8376 5.612725 TGCTTTGAATTCCTTTTGTTCCT 57.387 34.783 2.27 0.00 0.00 3.36
5307 8772 1.064463 GTCCAGGATCATCTTGGCCAA 60.064 52.381 19.25 19.25 42.72 4.52
5389 8854 2.675423 TCTGGACCTAGCGCACGT 60.675 61.111 11.47 0.96 0.00 4.49
5478 8959 8.470040 AAACAAAGTTTGATATGTCATGCATC 57.530 30.769 22.23 0.00 38.94 3.91
5479 8960 7.400599 ACAAAGTTTGATATGTCATGCATCT 57.599 32.000 22.23 0.00 38.94 2.90
5480 8961 7.478322 ACAAAGTTTGATATGTCATGCATCTC 58.522 34.615 22.23 7.07 38.94 2.75
5481 8962 7.338703 ACAAAGTTTGATATGTCATGCATCTCT 59.661 33.333 22.23 0.00 38.94 3.10
5482 8963 8.833493 CAAAGTTTGATATGTCATGCATCTCTA 58.167 33.333 10.19 2.17 38.94 2.43
5483 8964 7.959689 AGTTTGATATGTCATGCATCTCTAC 57.040 36.000 0.00 8.48 38.94 2.59
5484 8965 7.733969 AGTTTGATATGTCATGCATCTCTACT 58.266 34.615 0.00 9.96 38.94 2.57
5485 8966 8.864087 AGTTTGATATGTCATGCATCTCTACTA 58.136 33.333 0.00 0.00 38.94 1.82
5486 8967 8.920665 GTTTGATATGTCATGCATCTCTACTAC 58.079 37.037 0.00 0.00 38.94 2.73
5487 8968 8.414629 TTGATATGTCATGCATCTCTACTACT 57.585 34.615 0.00 0.00 38.94 2.57
5488 8969 8.414629 TGATATGTCATGCATCTCTACTACTT 57.585 34.615 0.00 0.00 38.94 2.24
5531 9012 3.040965 CTGCCACAGGACCATGTTT 57.959 52.632 0.00 0.00 0.00 2.83
5551 9033 3.060615 CCCGTCCTTCGTCCGTCT 61.061 66.667 0.00 0.00 37.94 4.18
5561 9043 1.009900 CGTCCGTCTCCATCGCTAC 60.010 63.158 0.00 0.00 0.00 3.58
5605 9090 3.358076 CTCTCGTTCCCTCCCGCAC 62.358 68.421 0.00 0.00 0.00 5.34
5606 9091 4.796231 CTCGTTCCCTCCCGCACG 62.796 72.222 0.00 0.00 0.00 5.34
5661 9173 1.075536 AGATTGTGACCCCTTTCCCAC 59.924 52.381 0.00 0.00 0.00 4.61
5670 9182 1.443729 CCCTTTCCCACCCTTCCCTT 61.444 60.000 0.00 0.00 0.00 3.95
5671 9183 0.251787 CCTTTCCCACCCTTCCCTTG 60.252 60.000 0.00 0.00 0.00 3.61
5673 9185 1.368268 TTTCCCACCCTTCCCTTGCT 61.368 55.000 0.00 0.00 0.00 3.91
5681 9193 1.600636 CTTCCCTTGCTTGACGGCA 60.601 57.895 0.00 0.00 40.74 5.69
5695 9207 4.479993 GGCAGCCGATGGACAGCT 62.480 66.667 0.00 0.00 37.32 4.24
5702 9233 2.045634 GATGGACAGCTGCAGCCA 60.046 61.111 34.39 24.66 43.38 4.75
5732 9263 0.756442 CATCAATCCCGGCCATGGTT 60.756 55.000 14.67 0.00 0.00 3.67
5735 9266 2.621445 AATCCCGGCCATGGTTCCA 61.621 57.895 14.67 0.00 0.00 3.53
5737 9268 4.047125 CCCGGCCATGGTTCCACT 62.047 66.667 14.67 0.00 0.00 4.00
5742 9273 1.604593 GCCATGGTTCCACTGCTGT 60.605 57.895 14.67 0.00 0.00 4.40
5760 9291 4.444838 CGTCGCCACCAATCCCGA 62.445 66.667 0.00 0.00 0.00 5.14
5767 9298 1.302949 CACCAATCCCGACCATGGT 59.697 57.895 19.89 19.89 46.80 3.55
5873 9422 1.555075 CCGGAGTCTTTTGGGATGAGA 59.445 52.381 0.00 0.00 0.00 3.27
5874 9423 2.027192 CCGGAGTCTTTTGGGATGAGAA 60.027 50.000 0.00 0.00 0.00 2.87
5875 9424 3.559171 CCGGAGTCTTTTGGGATGAGAAA 60.559 47.826 0.00 0.00 0.00 2.52
5876 9425 4.072131 CGGAGTCTTTTGGGATGAGAAAA 58.928 43.478 0.00 0.00 0.00 2.29
5877 9426 4.702131 CGGAGTCTTTTGGGATGAGAAAAT 59.298 41.667 0.00 0.00 0.00 1.82
5878 9427 5.183904 CGGAGTCTTTTGGGATGAGAAAATT 59.816 40.000 0.00 0.00 0.00 1.82
5879 9428 6.294731 CGGAGTCTTTTGGGATGAGAAAATTT 60.295 38.462 0.00 0.00 0.00 1.82
5880 9429 6.870439 GGAGTCTTTTGGGATGAGAAAATTTG 59.130 38.462 0.00 0.00 0.00 2.32
5881 9430 7.255942 GGAGTCTTTTGGGATGAGAAAATTTGA 60.256 37.037 0.00 0.00 0.00 2.69
5882 9431 7.664758 AGTCTTTTGGGATGAGAAAATTTGAG 58.335 34.615 0.00 0.00 0.00 3.02
5883 9432 7.506938 AGTCTTTTGGGATGAGAAAATTTGAGA 59.493 33.333 0.00 0.00 0.00 3.27
5884 9433 7.811713 GTCTTTTGGGATGAGAAAATTTGAGAG 59.188 37.037 0.00 0.00 0.00 3.20
5885 9434 6.594788 TTTGGGATGAGAAAATTTGAGAGG 57.405 37.500 0.00 0.00 0.00 3.69
5886 9435 4.603131 TGGGATGAGAAAATTTGAGAGGG 58.397 43.478 0.00 0.00 0.00 4.30
5887 9436 3.956848 GGGATGAGAAAATTTGAGAGGGG 59.043 47.826 0.00 0.00 0.00 4.79
5888 9437 3.382865 GGATGAGAAAATTTGAGAGGGGC 59.617 47.826 0.00 0.00 0.00 5.80
5889 9438 2.436417 TGAGAAAATTTGAGAGGGGCG 58.564 47.619 0.00 0.00 0.00 6.13
5890 9439 2.039746 TGAGAAAATTTGAGAGGGGCGA 59.960 45.455 0.00 0.00 0.00 5.54
5891 9440 3.282885 GAGAAAATTTGAGAGGGGCGAT 58.717 45.455 0.00 0.00 0.00 4.58
5892 9441 3.282885 AGAAAATTTGAGAGGGGCGATC 58.717 45.455 0.00 0.00 0.00 3.69
5893 9442 1.668419 AAATTTGAGAGGGGCGATCG 58.332 50.000 11.69 11.69 0.00 3.69
5894 9443 0.179045 AATTTGAGAGGGGCGATCGG 60.179 55.000 18.30 0.00 0.00 4.18
5895 9444 2.666596 ATTTGAGAGGGGCGATCGGC 62.667 60.000 31.57 31.57 42.51 5.54
5918 9467 4.891727 CGCCGCCGCTACCATCTT 62.892 66.667 0.00 0.00 0.00 2.40
5919 9468 2.513897 GCCGCCGCTACCATCTTT 60.514 61.111 0.00 0.00 0.00 2.52
5920 9469 2.534903 GCCGCCGCTACCATCTTTC 61.535 63.158 0.00 0.00 0.00 2.62
5921 9470 1.887707 CCGCCGCTACCATCTTTCC 60.888 63.158 0.00 0.00 0.00 3.13
5922 9471 1.887707 CGCCGCTACCATCTTTCCC 60.888 63.158 0.00 0.00 0.00 3.97
5923 9472 1.526225 GCCGCTACCATCTTTCCCC 60.526 63.158 0.00 0.00 0.00 4.81
5924 9473 1.984288 GCCGCTACCATCTTTCCCCT 61.984 60.000 0.00 0.00 0.00 4.79
5925 9474 0.106894 CCGCTACCATCTTTCCCCTC 59.893 60.000 0.00 0.00 0.00 4.30
5926 9475 1.123928 CGCTACCATCTTTCCCCTCT 58.876 55.000 0.00 0.00 0.00 3.69
5927 9476 2.317040 CGCTACCATCTTTCCCCTCTA 58.683 52.381 0.00 0.00 0.00 2.43
5928 9477 2.297597 CGCTACCATCTTTCCCCTCTAG 59.702 54.545 0.00 0.00 0.00 2.43
5929 9478 3.577919 GCTACCATCTTTCCCCTCTAGA 58.422 50.000 0.00 0.00 0.00 2.43
5930 9479 3.322541 GCTACCATCTTTCCCCTCTAGAC 59.677 52.174 0.00 0.00 0.00 2.59
5931 9480 2.765502 ACCATCTTTCCCCTCTAGACC 58.234 52.381 0.00 0.00 0.00 3.85
5932 9481 2.319438 ACCATCTTTCCCCTCTAGACCT 59.681 50.000 0.00 0.00 0.00 3.85
5933 9482 3.536434 ACCATCTTTCCCCTCTAGACCTA 59.464 47.826 0.00 0.00 0.00 3.08
5934 9483 4.173043 ACCATCTTTCCCCTCTAGACCTAT 59.827 45.833 0.00 0.00 0.00 2.57
5935 9484 5.158889 CCATCTTTCCCCTCTAGACCTATT 58.841 45.833 0.00 0.00 0.00 1.73
5936 9485 5.608860 CCATCTTTCCCCTCTAGACCTATTT 59.391 44.000 0.00 0.00 0.00 1.40
5937 9486 6.787957 CCATCTTTCCCCTCTAGACCTATTTA 59.212 42.308 0.00 0.00 0.00 1.40
5938 9487 7.459444 CCATCTTTCCCCTCTAGACCTATTTAT 59.541 40.741 0.00 0.00 0.00 1.40
5939 9488 8.536175 CATCTTTCCCCTCTAGACCTATTTATC 58.464 40.741 0.00 0.00 0.00 1.75
5940 9489 7.838241 TCTTTCCCCTCTAGACCTATTTATCT 58.162 38.462 0.00 0.00 0.00 1.98
5941 9490 8.297646 TCTTTCCCCTCTAGACCTATTTATCTT 58.702 37.037 0.00 0.00 0.00 2.40
5942 9491 7.857404 TTCCCCTCTAGACCTATTTATCTTG 57.143 40.000 0.00 0.00 0.00 3.02
5943 9492 5.780793 TCCCCTCTAGACCTATTTATCTTGC 59.219 44.000 0.00 0.00 0.00 4.01
5944 9493 5.046231 CCCCTCTAGACCTATTTATCTTGCC 60.046 48.000 0.00 0.00 0.00 4.52
5945 9494 5.782845 CCCTCTAGACCTATTTATCTTGCCT 59.217 44.000 0.00 0.00 0.00 4.75
5946 9495 6.295575 CCCTCTAGACCTATTTATCTTGCCTG 60.296 46.154 0.00 0.00 0.00 4.85
5947 9496 6.495181 CCTCTAGACCTATTTATCTTGCCTGA 59.505 42.308 0.00 0.00 0.00 3.86
5948 9497 7.309744 CCTCTAGACCTATTTATCTTGCCTGAG 60.310 44.444 0.00 0.00 0.00 3.35
5949 9498 5.559148 AGACCTATTTATCTTGCCTGAGG 57.441 43.478 0.00 0.00 0.00 3.86
5950 9499 4.971924 AGACCTATTTATCTTGCCTGAGGT 59.028 41.667 0.00 0.00 38.76 3.85
5951 9500 5.041191 ACCTATTTATCTTGCCTGAGGTG 57.959 43.478 0.00 0.00 34.78 4.00
5952 9501 4.475016 ACCTATTTATCTTGCCTGAGGTGT 59.525 41.667 0.00 0.00 34.78 4.16
5953 9502 4.818546 CCTATTTATCTTGCCTGAGGTGTG 59.181 45.833 0.00 0.00 0.00 3.82
5954 9503 3.788227 TTTATCTTGCCTGAGGTGTGT 57.212 42.857 0.00 0.00 0.00 3.72
5955 9504 2.768253 TATCTTGCCTGAGGTGTGTG 57.232 50.000 0.00 0.00 0.00 3.82
5956 9505 0.607489 ATCTTGCCTGAGGTGTGTGC 60.607 55.000 0.00 0.00 0.00 4.57
5957 9506 1.228063 CTTGCCTGAGGTGTGTGCT 60.228 57.895 0.00 0.00 0.00 4.40
5958 9507 1.512996 CTTGCCTGAGGTGTGTGCTG 61.513 60.000 0.00 0.00 0.00 4.41
5959 9508 1.981951 TTGCCTGAGGTGTGTGCTGA 61.982 55.000 0.00 0.00 0.00 4.26
5960 9509 1.963338 GCCTGAGGTGTGTGCTGAC 60.963 63.158 0.00 0.00 0.00 3.51
5961 9510 1.447217 CCTGAGGTGTGTGCTGACA 59.553 57.895 0.00 0.00 0.00 3.58
5962 9511 0.179048 CCTGAGGTGTGTGCTGACAA 60.179 55.000 0.00 0.00 32.49 3.18
5963 9512 1.544093 CCTGAGGTGTGTGCTGACAAT 60.544 52.381 0.00 0.00 32.49 2.71
5964 9513 2.224606 CTGAGGTGTGTGCTGACAATT 58.775 47.619 0.00 0.00 32.49 2.32
5965 9514 1.948834 TGAGGTGTGTGCTGACAATTG 59.051 47.619 3.24 3.24 32.49 2.32
5966 9515 1.949525 GAGGTGTGTGCTGACAATTGT 59.050 47.619 11.78 11.78 32.49 2.71
5967 9516 1.677576 AGGTGTGTGCTGACAATTGTG 59.322 47.619 17.58 3.43 32.49 3.33
5968 9517 1.269206 GGTGTGTGCTGACAATTGTGG 60.269 52.381 17.58 9.66 32.49 4.17
5969 9518 1.031235 TGTGTGCTGACAATTGTGGG 58.969 50.000 17.58 9.29 32.49 4.61
5970 9519 0.314935 GTGTGCTGACAATTGTGGGG 59.685 55.000 17.58 6.74 32.49 4.96
5971 9520 0.184692 TGTGCTGACAATTGTGGGGA 59.815 50.000 17.58 6.65 0.00 4.81
5972 9521 1.327303 GTGCTGACAATTGTGGGGAA 58.673 50.000 17.58 0.00 0.00 3.97
5973 9522 1.270550 GTGCTGACAATTGTGGGGAAG 59.729 52.381 17.58 6.63 0.00 3.46
5974 9523 0.890683 GCTGACAATTGTGGGGAAGG 59.109 55.000 17.58 0.00 0.00 3.46
5975 9524 1.549203 CTGACAATTGTGGGGAAGGG 58.451 55.000 17.58 0.00 0.00 3.95
5976 9525 1.075374 CTGACAATTGTGGGGAAGGGA 59.925 52.381 17.58 0.00 0.00 4.20
5977 9526 1.501170 TGACAATTGTGGGGAAGGGAA 59.499 47.619 17.58 0.00 0.00 3.97
5978 9527 2.171003 GACAATTGTGGGGAAGGGAAG 58.829 52.381 17.58 0.00 0.00 3.46
5979 9528 1.786441 ACAATTGTGGGGAAGGGAAGA 59.214 47.619 11.07 0.00 0.00 2.87
5980 9529 2.383338 ACAATTGTGGGGAAGGGAAGAT 59.617 45.455 11.07 0.00 0.00 2.40
5981 9530 2.762327 CAATTGTGGGGAAGGGAAGATG 59.238 50.000 0.00 0.00 0.00 2.90
5982 9531 1.455822 TTGTGGGGAAGGGAAGATGT 58.544 50.000 0.00 0.00 0.00 3.06
5983 9532 1.455822 TGTGGGGAAGGGAAGATGTT 58.544 50.000 0.00 0.00 0.00 2.71
5984 9533 1.786441 TGTGGGGAAGGGAAGATGTTT 59.214 47.619 0.00 0.00 0.00 2.83
5985 9534 2.990284 TGTGGGGAAGGGAAGATGTTTA 59.010 45.455 0.00 0.00 0.00 2.01
5986 9535 3.245122 TGTGGGGAAGGGAAGATGTTTAC 60.245 47.826 0.00 0.00 0.00 2.01
5987 9536 3.010250 GTGGGGAAGGGAAGATGTTTACT 59.990 47.826 0.00 0.00 0.00 2.24
5988 9537 4.226620 GTGGGGAAGGGAAGATGTTTACTA 59.773 45.833 0.00 0.00 0.00 1.82
5989 9538 4.473559 TGGGGAAGGGAAGATGTTTACTAG 59.526 45.833 0.00 0.00 0.00 2.57
5990 9539 4.141459 GGGGAAGGGAAGATGTTTACTAGG 60.141 50.000 0.00 0.00 0.00 3.02
5991 9540 4.473922 GGGAAGGGAAGATGTTTACTAGGT 59.526 45.833 0.00 0.00 0.00 3.08
5992 9541 5.429130 GGAAGGGAAGATGTTTACTAGGTG 58.571 45.833 0.00 0.00 0.00 4.00
5993 9542 4.489306 AGGGAAGATGTTTACTAGGTGC 57.511 45.455 0.00 0.00 0.00 5.01
5994 9543 3.844211 AGGGAAGATGTTTACTAGGTGCA 59.156 43.478 0.00 0.00 0.00 4.57
5995 9544 4.080863 AGGGAAGATGTTTACTAGGTGCAG 60.081 45.833 0.00 0.00 0.00 4.41
5996 9545 4.192317 GGAAGATGTTTACTAGGTGCAGG 58.808 47.826 0.00 0.00 0.00 4.85
5997 9546 4.081087 GGAAGATGTTTACTAGGTGCAGGA 60.081 45.833 0.00 0.00 0.00 3.86
5998 9547 4.744795 AGATGTTTACTAGGTGCAGGAG 57.255 45.455 0.00 0.00 0.00 3.69
5999 9548 4.353777 AGATGTTTACTAGGTGCAGGAGA 58.646 43.478 0.00 0.00 0.00 3.71
6000 9549 4.777896 AGATGTTTACTAGGTGCAGGAGAA 59.222 41.667 0.00 0.00 0.00 2.87
6001 9550 4.537135 TGTTTACTAGGTGCAGGAGAAG 57.463 45.455 0.00 0.00 0.00 2.85
6002 9551 4.157246 TGTTTACTAGGTGCAGGAGAAGA 58.843 43.478 0.00 0.00 0.00 2.87
6003 9552 4.021368 TGTTTACTAGGTGCAGGAGAAGAC 60.021 45.833 0.00 0.00 0.00 3.01
6004 9553 1.562783 ACTAGGTGCAGGAGAAGACC 58.437 55.000 0.00 0.00 0.00 3.85
6005 9554 0.457851 CTAGGTGCAGGAGAAGACCG 59.542 60.000 0.00 0.00 33.39 4.79
6006 9555 0.970937 TAGGTGCAGGAGAAGACCGG 60.971 60.000 0.00 0.00 33.39 5.28
6009 9558 4.070552 GCAGGAGAAGACCGGCGT 62.071 66.667 6.01 0.00 40.68 5.68
6010 9559 2.182030 CAGGAGAAGACCGGCGTC 59.818 66.667 6.01 2.14 39.50 5.19
6018 9567 2.031465 GACCGGCGTCTTTTGGGA 59.969 61.111 6.01 0.00 35.99 4.37
6019 9568 1.376812 GACCGGCGTCTTTTGGGAT 60.377 57.895 6.01 0.00 35.99 3.85
6020 9569 1.644786 GACCGGCGTCTTTTGGGATG 61.645 60.000 6.01 0.00 35.99 3.51
6021 9570 1.376683 CCGGCGTCTTTTGGGATGA 60.377 57.895 6.01 0.00 0.00 2.92
6022 9571 1.369091 CCGGCGTCTTTTGGGATGAG 61.369 60.000 6.01 0.00 0.00 2.90
6067 9618 1.954528 CTCCTGTTGTTGCTGCTGG 59.045 57.895 0.00 0.00 0.00 4.85
6074 9625 2.038952 TGTTGTTGCTGCTGGTCTCTAT 59.961 45.455 0.00 0.00 0.00 1.98
6076 9627 1.065926 TGTTGCTGCTGGTCTCTATGG 60.066 52.381 0.00 0.00 0.00 2.74
6092 9643 4.978099 TCTATGGAAGAGATTGGGAATGC 58.022 43.478 0.00 0.00 0.00 3.56
6093 9644 3.967467 ATGGAAGAGATTGGGAATGCT 57.033 42.857 0.00 0.00 0.00 3.79
6094 9645 3.744940 TGGAAGAGATTGGGAATGCTT 57.255 42.857 0.00 0.00 0.00 3.91
6095 9646 3.624777 TGGAAGAGATTGGGAATGCTTC 58.375 45.455 0.00 0.00 32.41 3.86
6106 9657 3.004752 GGAATGCTTCCTCAGGCTTAA 57.995 47.619 7.46 0.00 46.57 1.85
6107 9658 3.356290 GGAATGCTTCCTCAGGCTTAAA 58.644 45.455 7.46 0.00 46.57 1.52
6110 9661 3.439857 TGCTTCCTCAGGCTTAAACAT 57.560 42.857 0.00 0.00 0.00 2.71
6111 9662 3.084039 TGCTTCCTCAGGCTTAAACATG 58.916 45.455 0.00 0.00 0.00 3.21
6112 9663 2.424956 GCTTCCTCAGGCTTAAACATGG 59.575 50.000 0.00 0.00 0.00 3.66
6113 9664 3.873801 GCTTCCTCAGGCTTAAACATGGA 60.874 47.826 0.00 0.00 0.00 3.41
6115 9666 2.026262 TCCTCAGGCTTAAACATGGACC 60.026 50.000 0.00 0.00 0.00 4.46
6116 9667 2.009774 CTCAGGCTTAAACATGGACCG 58.990 52.381 0.00 0.00 0.00 4.79
6117 9668 1.626321 TCAGGCTTAAACATGGACCGA 59.374 47.619 0.00 0.00 0.00 4.69
6118 9669 2.039216 TCAGGCTTAAACATGGACCGAA 59.961 45.455 0.00 0.00 0.00 4.30
6120 9671 3.081804 AGGCTTAAACATGGACCGAAAG 58.918 45.455 0.00 0.00 0.00 2.62
6121 9672 2.817844 GGCTTAAACATGGACCGAAAGT 59.182 45.455 0.00 0.00 0.00 2.66
6123 9674 3.365969 GCTTAAACATGGACCGAAAGTGG 60.366 47.826 0.00 0.00 0.00 4.00
6124 9675 1.616159 AAACATGGACCGAAAGTGGG 58.384 50.000 0.00 0.00 0.00 4.61
6125 9676 0.893727 AACATGGACCGAAAGTGGGC 60.894 55.000 0.00 0.00 35.71 5.36
6126 9677 1.002134 CATGGACCGAAAGTGGGCT 60.002 57.895 0.00 0.00 37.14 5.19
6127 9678 1.002134 ATGGACCGAAAGTGGGCTG 60.002 57.895 0.00 0.00 37.14 4.85
6128 9679 3.056328 GGACCGAAAGTGGGCTGC 61.056 66.667 0.00 0.00 37.14 5.25
6129 9680 2.281484 GACCGAAAGTGGGCTGCA 60.281 61.111 0.50 0.00 32.64 4.41
6130 9681 1.896660 GACCGAAAGTGGGCTGCAA 60.897 57.895 0.50 0.00 32.64 4.08
6131 9682 1.228552 ACCGAAAGTGGGCTGCAAT 60.229 52.632 0.50 0.00 0.00 3.56
6132 9683 0.827507 ACCGAAAGTGGGCTGCAATT 60.828 50.000 0.50 0.00 0.00 2.32
6133 9684 0.318120 CCGAAAGTGGGCTGCAATTT 59.682 50.000 0.50 0.00 0.00 1.82
6134 9685 1.543802 CCGAAAGTGGGCTGCAATTTA 59.456 47.619 0.50 0.00 0.00 1.40
6135 9686 2.029470 CCGAAAGTGGGCTGCAATTTAA 60.029 45.455 0.50 0.00 0.00 1.52
6136 9687 3.368323 CCGAAAGTGGGCTGCAATTTAAT 60.368 43.478 0.50 0.00 0.00 1.40
6137 9688 4.244862 CGAAAGTGGGCTGCAATTTAATT 58.755 39.130 0.50 0.00 0.00 1.40
6138 9689 4.091800 CGAAAGTGGGCTGCAATTTAATTG 59.908 41.667 12.84 12.84 43.06 2.32
6147 9698 0.922717 CAATTTAATTGCGCCAGCCG 59.077 50.000 4.18 0.00 44.33 5.52
6148 9699 0.179113 AATTTAATTGCGCCAGCCGG 60.179 50.000 4.18 0.00 44.33 6.13
6149 9700 2.015227 ATTTAATTGCGCCAGCCGGG 62.015 55.000 4.18 0.00 44.33 5.73
6150 9701 3.929334 TTAATTGCGCCAGCCGGGT 62.929 57.895 4.18 0.00 44.33 5.28
6156 9707 4.697756 CGCCAGCCGGGTCTTGAA 62.698 66.667 1.27 0.00 39.65 2.69
6157 9708 3.056328 GCCAGCCGGGTCTTGAAC 61.056 66.667 1.27 0.00 39.65 3.18
6158 9709 2.750350 CCAGCCGGGTCTTGAACT 59.250 61.111 1.27 0.00 0.00 3.01
6159 9710 1.376037 CCAGCCGGGTCTTGAACTC 60.376 63.158 1.27 0.00 0.00 3.01
6160 9711 1.371183 CAGCCGGGTCTTGAACTCA 59.629 57.895 1.27 0.00 0.00 3.41
6161 9712 0.250295 CAGCCGGGTCTTGAACTCAA 60.250 55.000 1.27 0.00 0.00 3.02
6173 9724 3.297134 TGAACTCAAGACCTTTTGGCT 57.703 42.857 0.00 0.00 45.59 4.75
6174 9725 3.214328 TGAACTCAAGACCTTTTGGCTC 58.786 45.455 0.00 0.00 45.59 4.70
6175 9726 3.117888 TGAACTCAAGACCTTTTGGCTCT 60.118 43.478 0.00 0.00 45.59 4.09
6176 9727 2.856222 ACTCAAGACCTTTTGGCTCTG 58.144 47.619 0.00 0.00 45.59 3.35
6177 9728 2.439507 ACTCAAGACCTTTTGGCTCTGA 59.560 45.455 0.00 0.00 45.59 3.27
6178 9729 2.810852 CTCAAGACCTTTTGGCTCTGAC 59.189 50.000 0.00 0.00 45.59 3.51
6179 9730 2.172505 TCAAGACCTTTTGGCTCTGACA 59.827 45.455 0.00 0.00 45.59 3.58
6180 9731 2.262423 AGACCTTTTGGCTCTGACAC 57.738 50.000 0.00 0.00 45.59 3.67
6181 9732 1.202818 AGACCTTTTGGCTCTGACACC 60.203 52.381 0.00 0.00 45.59 4.16
6182 9733 0.550914 ACCTTTTGGCTCTGACACCA 59.449 50.000 0.00 0.00 45.59 4.17
6183 9734 1.145738 ACCTTTTGGCTCTGACACCAT 59.854 47.619 0.00 0.00 45.59 3.55
6184 9735 1.542915 CCTTTTGGCTCTGACACCATG 59.457 52.381 0.00 0.00 35.42 3.66
6185 9736 2.233271 CTTTTGGCTCTGACACCATGT 58.767 47.619 0.00 0.00 35.42 3.21
6186 9737 3.411446 CTTTTGGCTCTGACACCATGTA 58.589 45.455 0.00 0.00 35.42 2.29
6187 9738 3.500448 TTTGGCTCTGACACCATGTAA 57.500 42.857 0.00 0.00 35.42 2.41
6188 9739 3.500448 TTGGCTCTGACACCATGTAAA 57.500 42.857 0.00 0.00 35.42 2.01
6189 9740 3.500448 TGGCTCTGACACCATGTAAAA 57.500 42.857 0.00 0.00 0.00 1.52
6190 9741 3.411446 TGGCTCTGACACCATGTAAAAG 58.589 45.455 0.00 0.00 0.00 2.27
6191 9742 3.181445 TGGCTCTGACACCATGTAAAAGT 60.181 43.478 0.00 0.00 0.00 2.66
6192 9743 3.189287 GGCTCTGACACCATGTAAAAGTG 59.811 47.826 0.00 0.00 37.53 3.16
6193 9744 3.365364 GCTCTGACACCATGTAAAAGTGC 60.365 47.826 0.00 0.00 34.83 4.40
6194 9745 3.814625 TCTGACACCATGTAAAAGTGCA 58.185 40.909 0.00 0.00 34.83 4.57
6195 9746 4.397420 TCTGACACCATGTAAAAGTGCAT 58.603 39.130 0.00 0.00 34.83 3.96
6196 9747 4.216042 TCTGACACCATGTAAAAGTGCATG 59.784 41.667 0.00 0.00 44.81 4.06
6197 9748 3.244976 GACACCATGTAAAAGTGCATGC 58.755 45.455 11.82 11.82 44.11 4.06
6198 9749 2.892852 ACACCATGTAAAAGTGCATGCT 59.107 40.909 20.33 0.00 44.11 3.79
6199 9750 3.057315 ACACCATGTAAAAGTGCATGCTC 60.057 43.478 20.33 15.94 44.11 4.26
6200 9751 3.192001 CACCATGTAAAAGTGCATGCTCT 59.808 43.478 20.33 18.23 44.11 4.09
6201 9752 4.395854 CACCATGTAAAAGTGCATGCTCTA 59.604 41.667 21.70 7.14 44.11 2.43
6202 9753 4.637534 ACCATGTAAAAGTGCATGCTCTAG 59.362 41.667 21.70 6.98 44.11 2.43
6203 9754 4.497006 CCATGTAAAAGTGCATGCTCTAGC 60.497 45.833 21.70 12.53 44.11 3.42
6204 9755 3.009723 TGTAAAAGTGCATGCTCTAGCC 58.990 45.455 21.70 11.06 41.18 3.93
6205 9756 2.205022 AAAAGTGCATGCTCTAGCCA 57.795 45.000 21.70 0.00 41.18 4.75
6206 9757 2.205022 AAAGTGCATGCTCTAGCCAA 57.795 45.000 21.70 0.00 41.18 4.52
6207 9758 2.431954 AAGTGCATGCTCTAGCCAAT 57.568 45.000 21.70 3.24 41.18 3.16
6208 9759 1.676746 AGTGCATGCTCTAGCCAATG 58.323 50.000 20.22 0.00 41.18 2.82
6209 9760 0.030369 GTGCATGCTCTAGCCAATGC 59.970 55.000 20.33 16.33 45.25 3.56
6210 9761 2.411535 GCATGCTCTAGCCAATGCA 58.588 52.632 11.37 0.00 44.74 3.96
6211 9762 0.742505 GCATGCTCTAGCCAATGCAA 59.257 50.000 11.37 0.00 44.74 4.08
6212 9763 1.535437 GCATGCTCTAGCCAATGCAAC 60.535 52.381 11.37 2.38 44.74 4.17
6213 9764 1.066605 CATGCTCTAGCCAATGCAACC 59.933 52.381 0.00 0.00 41.13 3.77
6214 9765 0.038021 TGCTCTAGCCAATGCAACCA 59.962 50.000 0.00 0.00 41.13 3.67
6215 9766 1.176527 GCTCTAGCCAATGCAACCAA 58.823 50.000 0.00 0.00 41.13 3.67
6216 9767 1.545582 GCTCTAGCCAATGCAACCAAA 59.454 47.619 0.00 0.00 41.13 3.28
6217 9768 2.029110 GCTCTAGCCAATGCAACCAAAA 60.029 45.455 0.00 0.00 41.13 2.44
6218 9769 3.841643 CTCTAGCCAATGCAACCAAAAG 58.158 45.455 0.00 0.00 41.13 2.27
6219 9770 3.495331 TCTAGCCAATGCAACCAAAAGA 58.505 40.909 0.00 0.00 41.13 2.52
6220 9771 4.088634 TCTAGCCAATGCAACCAAAAGAT 58.911 39.130 0.00 0.00 41.13 2.40
6221 9772 3.323751 AGCCAATGCAACCAAAAGATC 57.676 42.857 0.00 0.00 41.13 2.75
6222 9773 1.994779 GCCAATGCAACCAAAAGATCG 59.005 47.619 0.00 0.00 37.47 3.69
6223 9774 2.352617 GCCAATGCAACCAAAAGATCGA 60.353 45.455 0.00 0.00 37.47 3.59
6224 9775 3.676873 GCCAATGCAACCAAAAGATCGAT 60.677 43.478 0.00 0.00 37.47 3.59
6225 9776 4.107622 CCAATGCAACCAAAAGATCGATC 58.892 43.478 17.91 17.91 0.00 3.69
6226 9777 4.142315 CCAATGCAACCAAAAGATCGATCT 60.142 41.667 22.32 22.32 39.22 2.75
6227 9778 4.627611 ATGCAACCAAAAGATCGATCTG 57.372 40.909 27.93 17.41 37.19 2.90
6228 9779 3.673902 TGCAACCAAAAGATCGATCTGA 58.326 40.909 27.93 3.29 37.19 3.27
6229 9780 4.264253 TGCAACCAAAAGATCGATCTGAT 58.736 39.130 27.93 17.16 41.06 2.90
6230 9781 4.095334 TGCAACCAAAAGATCGATCTGATG 59.905 41.667 27.93 25.50 37.47 3.07
6231 9782 4.497006 GCAACCAAAAGATCGATCTGATGG 60.497 45.833 35.57 35.57 43.60 3.51
6232 9783 4.760530 ACCAAAAGATCGATCTGATGGA 57.239 40.909 39.75 4.80 42.00 3.41
6233 9784 5.102953 ACCAAAAGATCGATCTGATGGAA 57.897 39.130 39.75 1.61 42.00 3.53
6234 9785 5.121811 ACCAAAAGATCGATCTGATGGAAG 58.878 41.667 39.75 25.81 42.00 3.46
6235 9786 5.104776 ACCAAAAGATCGATCTGATGGAAGA 60.105 40.000 39.75 0.93 42.00 2.87
6236 9787 5.466058 CCAAAAGATCGATCTGATGGAAGAG 59.534 44.000 34.94 19.06 42.00 2.85
6237 9788 6.279123 CAAAAGATCGATCTGATGGAAGAGA 58.721 40.000 27.93 0.00 37.47 3.10
6238 9789 5.452078 AAGATCGATCTGATGGAAGAGAC 57.548 43.478 27.93 0.00 37.47 3.36
6239 9790 4.728772 AGATCGATCTGATGGAAGAGACT 58.271 43.478 26.78 0.00 37.47 3.24
6240 9791 5.875224 AGATCGATCTGATGGAAGAGACTA 58.125 41.667 26.78 0.00 37.47 2.59
6241 9792 5.939883 AGATCGATCTGATGGAAGAGACTAG 59.060 44.000 26.78 0.00 37.47 2.57
6242 9793 4.393834 TCGATCTGATGGAAGAGACTAGG 58.606 47.826 0.00 0.00 0.00 3.02
6243 9794 3.057596 CGATCTGATGGAAGAGACTAGGC 60.058 52.174 0.00 0.00 0.00 3.93
6244 9795 3.388552 TCTGATGGAAGAGACTAGGCA 57.611 47.619 0.00 0.00 0.00 4.75
6245 9796 3.295093 TCTGATGGAAGAGACTAGGCAG 58.705 50.000 0.00 0.00 0.00 4.85
6246 9797 1.759445 TGATGGAAGAGACTAGGCAGC 59.241 52.381 0.00 0.00 0.00 5.25
6247 9798 1.759445 GATGGAAGAGACTAGGCAGCA 59.241 52.381 0.00 0.00 0.00 4.41
6248 9799 0.898320 TGGAAGAGACTAGGCAGCAC 59.102 55.000 0.00 0.00 0.00 4.40
6249 9800 0.898320 GGAAGAGACTAGGCAGCACA 59.102 55.000 0.00 0.00 0.00 4.57
6250 9801 1.484240 GGAAGAGACTAGGCAGCACAT 59.516 52.381 0.00 0.00 0.00 3.21
6251 9802 2.093235 GGAAGAGACTAGGCAGCACATT 60.093 50.000 0.00 0.00 0.00 2.71
6252 9803 3.133003 GGAAGAGACTAGGCAGCACATTA 59.867 47.826 0.00 0.00 0.00 1.90
6253 9804 4.202305 GGAAGAGACTAGGCAGCACATTAT 60.202 45.833 0.00 0.00 0.00 1.28
6254 9805 5.011125 GGAAGAGACTAGGCAGCACATTATA 59.989 44.000 0.00 0.00 0.00 0.98
6255 9806 5.461032 AGAGACTAGGCAGCACATTATAC 57.539 43.478 0.00 0.00 0.00 1.47
6256 9807 4.022762 AGAGACTAGGCAGCACATTATACG 60.023 45.833 0.00 0.00 0.00 3.06
6257 9808 3.637229 AGACTAGGCAGCACATTATACGT 59.363 43.478 0.00 0.00 0.00 3.57
6258 9809 3.978687 ACTAGGCAGCACATTATACGTC 58.021 45.455 0.00 0.00 0.00 4.34
6259 9810 2.979814 AGGCAGCACATTATACGTCA 57.020 45.000 0.00 0.00 0.00 4.35
6260 9811 3.260475 AGGCAGCACATTATACGTCAA 57.740 42.857 0.00 0.00 0.00 3.18
6261 9812 2.936498 AGGCAGCACATTATACGTCAAC 59.064 45.455 0.00 0.00 0.00 3.18
6262 9813 2.675844 GGCAGCACATTATACGTCAACA 59.324 45.455 0.00 0.00 0.00 3.33
6280 9831 0.179116 CATGACGGACTGCTCTCTGG 60.179 60.000 0.00 0.00 0.00 3.86
6319 9870 8.924511 TTTCTTCTTCAATGGACTAATGAGTT 57.075 30.769 0.00 0.00 35.45 3.01
6330 9881 6.711277 TGGACTAATGAGTTTATGCTTCTGT 58.289 36.000 0.00 0.00 35.45 3.41
6347 9898 4.998671 TCTGTTTGCACCAATTTGAGAA 57.001 36.364 0.00 0.00 0.00 2.87
6359 9910 5.130145 ACCAATTTGAGAAAATGGTTGTGGA 59.870 36.000 3.41 0.00 36.29 4.02
6363 9914 5.867903 TTGAGAAAATGGTTGTGGAATGT 57.132 34.783 0.00 0.00 0.00 2.71
6366 9917 6.068010 TGAGAAAATGGTTGTGGAATGTAGT 58.932 36.000 0.00 0.00 0.00 2.73
6372 9923 8.593945 AAATGGTTGTGGAATGTAGTAATCAT 57.406 30.769 0.00 0.00 0.00 2.45
6408 9959 3.455910 AGCCATGCTTAGACTTGATGGTA 59.544 43.478 0.00 0.00 33.89 3.25
6437 9988 4.794334 TCCTCCTCTGTGGTATCTAAGTC 58.206 47.826 0.00 0.00 37.07 3.01
6441 9992 6.406400 CCTCCTCTGTGGTATCTAAGTCTTTG 60.406 46.154 0.00 0.00 37.07 2.77
6455 10006 5.518848 AAGTCTTTGATGTGTGCATTTGA 57.481 34.783 0.00 0.00 35.07 2.69
6456 10007 5.117355 AGTCTTTGATGTGTGCATTTGAG 57.883 39.130 0.00 0.00 35.07 3.02
6457 10008 4.581824 AGTCTTTGATGTGTGCATTTGAGT 59.418 37.500 0.00 0.00 35.07 3.41
6458 10009 5.068198 AGTCTTTGATGTGTGCATTTGAGTT 59.932 36.000 0.00 0.00 35.07 3.01
6459 10010 5.400485 GTCTTTGATGTGTGCATTTGAGTTC 59.600 40.000 0.00 0.00 35.07 3.01
6460 10011 4.915158 TTGATGTGTGCATTTGAGTTCA 57.085 36.364 0.00 0.00 35.07 3.18
6461 10012 4.492791 TGATGTGTGCATTTGAGTTCAG 57.507 40.909 0.00 0.00 35.07 3.02
6462 10013 3.884693 TGATGTGTGCATTTGAGTTCAGT 59.115 39.130 0.00 0.00 35.07 3.41
6463 10014 5.062528 TGATGTGTGCATTTGAGTTCAGTA 58.937 37.500 0.00 0.00 35.07 2.74
6464 10015 5.706833 TGATGTGTGCATTTGAGTTCAGTAT 59.293 36.000 0.00 0.00 35.07 2.12
6465 10016 5.611796 TGTGTGCATTTGAGTTCAGTATC 57.388 39.130 0.00 0.00 0.00 2.24
6466 10017 4.152223 TGTGTGCATTTGAGTTCAGTATCG 59.848 41.667 0.00 0.00 0.00 2.92
6467 10018 4.388773 GTGTGCATTTGAGTTCAGTATCGA 59.611 41.667 0.00 0.00 0.00 3.59
6505 10056 9.762933 ATCTAAGTTTTTAATGTGTGCATTTGT 57.237 25.926 0.00 0.00 42.19 2.83
6506 10057 9.243637 TCTAAGTTTTTAATGTGTGCATTTGTC 57.756 29.630 0.00 0.00 42.19 3.18
6507 10058 7.840342 AAGTTTTTAATGTGTGCATTTGTCA 57.160 28.000 0.00 0.00 42.19 3.58
6508 10059 7.232945 AGTTTTTAATGTGTGCATTTGTCAC 57.767 32.000 0.00 0.00 42.19 3.67
6509 10060 6.815641 AGTTTTTAATGTGTGCATTTGTCACA 59.184 30.769 9.24 9.24 42.19 3.58
6514 10065 4.221926 TGTGTGCATTTGTCACATGTAC 57.778 40.909 11.88 11.88 44.96 2.90
6515 10066 3.882288 TGTGTGCATTTGTCACATGTACT 59.118 39.130 17.52 0.00 44.96 2.73
6516 10067 4.221342 GTGTGCATTTGTCACATGTACTG 58.779 43.478 17.52 0.00 44.96 2.74
6517 10068 4.024133 GTGTGCATTTGTCACATGTACTGA 60.024 41.667 17.52 0.47 44.96 3.41
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
145 146 7.783042 CCTTAGTGAAGGTAGTTTGCTACTAT 58.217 38.462 5.00 0.00 46.46 2.12
180 3052 7.139392 CCATCTCTTCGTTTCTCGTATGATTA 58.861 38.462 0.00 0.00 40.80 1.75
201 3073 2.203070 ATTCGGACGCCAGCCATC 60.203 61.111 0.00 0.00 0.00 3.51
217 3089 4.331968 TGCTAGTTCCATTTCCGTTTCAT 58.668 39.130 0.00 0.00 0.00 2.57
239 3111 1.300697 GTTCGTGGGCTCGTGAACT 60.301 57.895 12.19 0.00 38.11 3.01
243 3115 1.284982 CTTCAGTTCGTGGGCTCGTG 61.285 60.000 3.18 0.00 0.00 4.35
245 3117 2.383527 GCTTCAGTTCGTGGGCTCG 61.384 63.158 0.00 0.00 0.00 5.03
300 3175 2.044650 TGCGCCTACTCTACCGGT 60.045 61.111 13.98 13.98 0.00 5.28
306 3181 2.716017 GGTGAGCTGCGCCTACTCT 61.716 63.158 18.47 3.83 44.03 3.24
556 3446 1.336609 GCGTCTCGTAAGTTTCCACCT 60.337 52.381 0.00 0.00 39.48 4.00
609 3499 2.008045 GCCTTGCCCGTCAACGTAATA 61.008 52.381 1.48 0.00 37.74 0.98
623 3514 3.181290 GCGCATTTTCCGCCTTGC 61.181 61.111 0.30 0.00 45.30 4.01
744 3637 3.381908 CGAGCAGGAGTAGTATTTCTGGT 59.618 47.826 5.41 5.41 38.63 4.00
806 3699 4.410555 AGAGAGATGTTAATCCCTTCCCAC 59.589 45.833 0.00 0.00 32.77 4.61
807 3700 4.635473 AGAGAGATGTTAATCCCTTCCCA 58.365 43.478 0.00 0.00 32.77 4.37
818 3711 5.141182 GGTAGGTGGATGAGAGAGATGTTA 58.859 45.833 0.00 0.00 0.00 2.41
877 3784 2.821366 CATGCGCTCCGGCTCTTT 60.821 61.111 9.73 0.00 36.09 2.52
913 3820 3.530910 GACACGGTGACAGGTGGGG 62.531 68.421 16.29 0.00 38.46 4.96
977 3884 0.965363 CTGTTCGGATGGTTTGGGGG 60.965 60.000 0.00 0.00 0.00 5.40
987 3894 2.811431 TGATTCGTTTTGCTGTTCGGAT 59.189 40.909 0.00 0.00 0.00 4.18
991 3898 3.058639 AGCTCTGATTCGTTTTGCTGTTC 60.059 43.478 0.00 0.00 0.00 3.18
1701 4866 0.471191 GGGGGTTGGGATTACCGTAG 59.529 60.000 0.00 0.00 44.64 3.51
1722 4887 3.124921 CCATGGTTCCGGCGTGAC 61.125 66.667 6.01 3.53 0.00 3.67
1751 4916 1.202830 AGTTACCATTGTCACCGCCAA 60.203 47.619 0.00 0.00 0.00 4.52
1857 5022 4.532126 TCATCACCATAATTCCGGCTATCT 59.468 41.667 0.00 0.00 0.00 1.98
1884 5049 1.413662 CCAGGAGCCCTATCTTCCTCA 60.414 57.143 0.00 0.00 29.64 3.86
1890 5055 2.316372 CCTATACCCAGGAGCCCTATCT 59.684 54.545 0.00 0.00 38.00 1.98
1926 5091 1.637553 ACCTCATCAATCCCAGCACTT 59.362 47.619 0.00 0.00 0.00 3.16
1971 5136 0.252057 TTGATGTCGGTCTCTCCCCA 60.252 55.000 0.00 0.00 0.00 4.96
1977 5142 1.275291 TCCACCTTTGATGTCGGTCTC 59.725 52.381 0.00 0.00 0.00 3.36
1983 5148 1.271597 ACAGCCTCCACCTTTGATGTC 60.272 52.381 0.00 0.00 0.00 3.06
1993 5158 3.721706 CTCCCCCACAGCCTCCAC 61.722 72.222 0.00 0.00 0.00 4.02
2013 5178 1.414550 GAGCCAGTATCCTCCAACTCC 59.585 57.143 0.00 0.00 0.00 3.85
2091 5256 9.857656 TCCATCTTATTAGCTTCATTCTCATTT 57.142 29.630 0.00 0.00 0.00 2.32
2103 5268 6.810500 ACTATCCTCCTCCATCTTATTAGCT 58.189 40.000 0.00 0.00 0.00 3.32
2112 5277 4.484912 ACACCTTACTATCCTCCTCCATC 58.515 47.826 0.00 0.00 0.00 3.51
2126 5291 5.105837 ACGACCTCTAAATCAGACACCTTAC 60.106 44.000 0.00 0.00 0.00 2.34
2141 5306 3.165087 TCCCTTTCTCAACGACCTCTA 57.835 47.619 0.00 0.00 0.00 2.43
2142 5307 2.011122 TCCCTTTCTCAACGACCTCT 57.989 50.000 0.00 0.00 0.00 3.69
2233 5398 0.106819 GGCTTGTCATCTGAGGGCAT 60.107 55.000 0.00 0.00 0.00 4.40
2274 5439 3.071457 TCTTGTCATGTTCAGCCTTCTCA 59.929 43.478 0.00 0.00 0.00 3.27
2437 5602 4.040829 TGCAGTATCTCTATGGGTTGATGG 59.959 45.833 0.00 0.00 0.00 3.51
2504 5669 1.509923 GGGCTGTCATTTGCTGCTC 59.490 57.895 0.00 0.00 0.00 4.26
2633 5798 6.000219 ACATCTTGTATCTCAGTTTGTGCTT 59.000 36.000 0.00 0.00 0.00 3.91
2651 5816 4.202441 ACTGTTCTGTTCTTGCACATCTT 58.798 39.130 0.00 0.00 0.00 2.40
2743 5908 2.578495 CTTTGAACAATCGTGCTGAGC 58.422 47.619 0.00 0.00 0.00 4.26
2744 5909 2.225019 AGCTTTGAACAATCGTGCTGAG 59.775 45.455 0.00 0.00 30.51 3.35
2745 5910 2.221169 AGCTTTGAACAATCGTGCTGA 58.779 42.857 0.00 0.00 30.51 4.26
2746 5911 2.693797 AGCTTTGAACAATCGTGCTG 57.306 45.000 0.00 0.00 30.51 4.41
2747 5912 2.618241 TGAAGCTTTGAACAATCGTGCT 59.382 40.909 0.00 0.00 32.13 4.40
2748 5913 2.998772 TGAAGCTTTGAACAATCGTGC 58.001 42.857 0.00 0.00 0.00 5.34
2760 5925 5.010415 CACTTCTTCCCTGATTTGAAGCTTT 59.990 40.000 0.00 0.00 38.26 3.51
2770 5935 5.774690 TGTAAATTTGCACTTCTTCCCTGAT 59.225 36.000 4.71 0.00 0.00 2.90
2772 5937 5.452078 TGTAAATTTGCACTTCTTCCCTG 57.548 39.130 4.71 0.00 0.00 4.45
2799 5964 2.694213 TCATGTTGTGGTGGTGTATCG 58.306 47.619 0.00 0.00 0.00 2.92
2878 6043 7.020010 GTGACAACAGCTTCTTCTTTGATATG 58.980 38.462 0.00 0.00 0.00 1.78
2889 6054 4.452455 CCTTTTATCGTGACAACAGCTTCT 59.548 41.667 0.00 0.00 0.00 2.85
2912 6077 3.942115 GCTAGATTGTCCAAGTTCTTCCC 59.058 47.826 0.00 0.00 0.00 3.97
3036 6201 1.930908 GCTGCTGATTTTGCGCCTCT 61.931 55.000 4.18 0.00 0.00 3.69
3228 6393 6.128499 GCTATCAGCAGAATGAAATAGCAGAG 60.128 42.308 7.17 0.00 43.12 3.35
3313 6478 2.570302 AGTTAATCGGCTACTTGGTGGT 59.430 45.455 0.00 0.00 0.00 4.16
3327 6492 6.575162 AATCGGCCCATAAATCAGTTAATC 57.425 37.500 0.00 0.00 0.00 1.75
3347 6512 5.678955 AGTAGGGGATTAATAGGCGAATC 57.321 43.478 0.00 0.00 0.00 2.52
3379 6544 1.263356 TAACTGGTAACTGCTCGGCT 58.737 50.000 0.00 0.00 39.52 5.52
3464 6629 7.520798 TCAAGGCCAGTCATGATAAATCTATT 58.479 34.615 5.01 0.00 0.00 1.73
3467 6635 5.378230 TCAAGGCCAGTCATGATAAATCT 57.622 39.130 5.01 0.00 0.00 2.40
3558 6726 4.686972 TCGAAGATCACTGAGCCAATTAG 58.313 43.478 0.00 0.00 0.00 1.73
3695 6863 9.535878 GTAGCTCATTATATTAATGCCCTAGAC 57.464 37.037 0.00 0.00 0.00 2.59
3841 7009 1.521457 GCATAGTGCCACGCTGCTA 60.521 57.895 14.77 3.28 37.42 3.49
3963 7131 4.579869 ACAGGTGTCAACTTATAGCCTTG 58.420 43.478 0.00 0.00 0.00 3.61
4127 7296 3.202906 TGTTTGTGTTCACACTAGAGCC 58.797 45.455 11.30 0.00 46.55 4.70
4296 7465 4.153117 CACGAAATTTCACTTGCTCTAGCT 59.847 41.667 17.99 0.00 42.66 3.32
4604 7778 4.814234 GGATAACCGATATGTGCAGAACAA 59.186 41.667 0.00 0.00 43.61 2.83
4680 7854 5.983118 TGAACATAGGCACACTACATTATCG 59.017 40.000 0.00 0.00 33.70 2.92
4759 8223 5.757320 ACATGCAGCTCAAAGTATAAGCTAG 59.243 40.000 0.00 0.00 44.30 3.42
4829 8293 4.201657 CAAACATATGATCCACAGCTCCA 58.798 43.478 10.38 0.00 0.00 3.86
4912 8376 9.743057 TTCATTTTCTTTTATTTTCTTGCGAGA 57.257 25.926 0.00 0.00 0.00 4.04
5076 8541 2.831526 CCAAACCTCCATAAAACCTGGG 59.168 50.000 0.00 0.00 34.36 4.45
5243 8708 1.080995 GTGTCCGTGAGATGCTGCTC 61.081 60.000 0.00 0.00 35.46 4.26
5307 8772 0.898320 CAGACCTTGTCCTCACGGAT 59.102 55.000 0.00 0.00 42.43 4.18
5389 8854 8.659925 ATTGAACAAATGAACAAAATGCTACA 57.340 26.923 0.00 0.00 0.00 2.74
5527 9008 3.739167 CGAAGGACGGGCAAAACA 58.261 55.556 0.00 0.00 38.46 2.83
5549 9031 1.152525 GGAGGGGTAGCGATGGAGA 60.153 63.158 0.00 0.00 0.00 3.71
5551 9033 2.122989 GGGAGGGGTAGCGATGGA 60.123 66.667 0.00 0.00 0.00 3.41
5561 9043 2.813226 TTTTCATCGTGCGGGAGGGG 62.813 60.000 0.00 0.00 0.00 4.79
5584 9067 3.839432 GGGAGGGAACGAGAGCGG 61.839 72.222 0.00 0.00 43.17 5.52
5605 9090 0.029567 CGAGAGAAGGGGATTCGTCG 59.970 60.000 0.00 0.00 43.16 5.12
5606 9091 1.390565 TCGAGAGAAGGGGATTCGTC 58.609 55.000 0.00 0.00 43.16 4.20
5607 9092 3.590643 TCGAGAGAAGGGGATTCGT 57.409 52.632 0.00 0.00 43.16 3.85
5661 9173 1.675641 CCGTCAAGCAAGGGAAGGG 60.676 63.158 0.00 0.00 0.00 3.95
5687 9199 4.648626 GGTGGCTGCAGCTGTCCA 62.649 66.667 35.82 23.25 41.70 4.02
5702 9233 4.467084 ATTGATGGCGACGGCGGT 62.467 61.111 15.06 7.90 41.24 5.68
5732 9263 4.357947 GGCGACGACAGCAGTGGA 62.358 66.667 0.00 0.00 36.08 4.02
5735 9266 4.664677 GGTGGCGACGACAGCAGT 62.665 66.667 27.11 0.00 39.11 4.40
5742 9273 4.444838 CGGGATTGGTGGCGACGA 62.445 66.667 0.00 0.00 0.00 4.20
5767 9298 3.733344 GAATAGGTCAGCGGCGGCA 62.733 63.158 19.21 0.00 43.41 5.69
5777 9308 3.135530 ACCTCAGGCAAGATGAATAGGTC 59.864 47.826 0.00 0.00 0.00 3.85
5873 9422 2.017049 CGATCGCCCCTCTCAAATTTT 58.983 47.619 0.26 0.00 0.00 1.82
5874 9423 1.668419 CGATCGCCCCTCTCAAATTT 58.332 50.000 0.26 0.00 0.00 1.82
5875 9424 0.179045 CCGATCGCCCCTCTCAAATT 60.179 55.000 10.32 0.00 0.00 1.82
5876 9425 1.447643 CCGATCGCCCCTCTCAAAT 59.552 57.895 10.32 0.00 0.00 2.32
5877 9426 2.900273 CCGATCGCCCCTCTCAAA 59.100 61.111 10.32 0.00 0.00 2.69
5878 9427 3.849951 GCCGATCGCCCCTCTCAA 61.850 66.667 10.32 0.00 0.00 3.02
5901 9450 4.891727 AAGATGGTAGCGGCGGCG 62.892 66.667 28.70 28.70 46.35 6.46
5902 9451 2.513897 AAAGATGGTAGCGGCGGC 60.514 61.111 9.78 8.43 40.37 6.53
5903 9452 1.887707 GGAAAGATGGTAGCGGCGG 60.888 63.158 9.78 0.00 0.00 6.13
5904 9453 1.887707 GGGAAAGATGGTAGCGGCG 60.888 63.158 0.51 0.51 0.00 6.46
5905 9454 1.526225 GGGGAAAGATGGTAGCGGC 60.526 63.158 0.00 0.00 0.00 6.53
5906 9455 0.106894 GAGGGGAAAGATGGTAGCGG 59.893 60.000 0.00 0.00 0.00 5.52
5907 9456 1.123928 AGAGGGGAAAGATGGTAGCG 58.876 55.000 0.00 0.00 0.00 4.26
5908 9457 3.322541 GTCTAGAGGGGAAAGATGGTAGC 59.677 52.174 0.00 0.00 0.00 3.58
5909 9458 3.898741 GGTCTAGAGGGGAAAGATGGTAG 59.101 52.174 0.00 0.00 0.00 3.18
5910 9459 3.536434 AGGTCTAGAGGGGAAAGATGGTA 59.464 47.826 0.00 0.00 0.00 3.25
5911 9460 2.319438 AGGTCTAGAGGGGAAAGATGGT 59.681 50.000 0.00 0.00 0.00 3.55
5912 9461 3.053359 AGGTCTAGAGGGGAAAGATGG 57.947 52.381 0.00 0.00 0.00 3.51
5913 9462 6.755542 AAATAGGTCTAGAGGGGAAAGATG 57.244 41.667 0.00 0.00 0.00 2.90
5914 9463 8.469280 AGATAAATAGGTCTAGAGGGGAAAGAT 58.531 37.037 0.00 0.00 0.00 2.40
5915 9464 7.838241 AGATAAATAGGTCTAGAGGGGAAAGA 58.162 38.462 0.00 0.00 0.00 2.52
5916 9465 8.371699 CAAGATAAATAGGTCTAGAGGGGAAAG 58.628 40.741 0.00 0.00 0.00 2.62
5917 9466 7.202102 GCAAGATAAATAGGTCTAGAGGGGAAA 60.202 40.741 0.00 0.00 0.00 3.13
5918 9467 6.270231 GCAAGATAAATAGGTCTAGAGGGGAA 59.730 42.308 0.00 0.00 0.00 3.97
5919 9468 5.780793 GCAAGATAAATAGGTCTAGAGGGGA 59.219 44.000 0.00 0.00 0.00 4.81
5920 9469 5.046231 GGCAAGATAAATAGGTCTAGAGGGG 60.046 48.000 0.00 0.00 0.00 4.79
5921 9470 5.782845 AGGCAAGATAAATAGGTCTAGAGGG 59.217 44.000 0.00 0.00 0.00 4.30
5922 9471 6.495181 TCAGGCAAGATAAATAGGTCTAGAGG 59.505 42.308 0.00 0.00 0.00 3.69
5923 9472 7.309744 CCTCAGGCAAGATAAATAGGTCTAGAG 60.310 44.444 0.00 0.00 0.00 2.43
5924 9473 6.495181 CCTCAGGCAAGATAAATAGGTCTAGA 59.505 42.308 0.00 0.00 0.00 2.43
5925 9474 6.268847 ACCTCAGGCAAGATAAATAGGTCTAG 59.731 42.308 0.00 0.00 30.31 2.43
5926 9475 6.042093 CACCTCAGGCAAGATAAATAGGTCTA 59.958 42.308 0.00 0.00 33.90 2.59
5927 9476 4.971924 ACCTCAGGCAAGATAAATAGGTCT 59.028 41.667 0.00 0.00 30.31 3.85
5928 9477 5.059833 CACCTCAGGCAAGATAAATAGGTC 58.940 45.833 0.00 0.00 33.90 3.85
5929 9478 4.475016 ACACCTCAGGCAAGATAAATAGGT 59.525 41.667 0.00 0.00 36.55 3.08
5930 9479 4.818546 CACACCTCAGGCAAGATAAATAGG 59.181 45.833 0.00 0.00 0.00 2.57
5931 9480 5.295292 CACACACCTCAGGCAAGATAAATAG 59.705 44.000 0.00 0.00 0.00 1.73
5932 9481 5.185454 CACACACCTCAGGCAAGATAAATA 58.815 41.667 0.00 0.00 0.00 1.40
5933 9482 4.012374 CACACACCTCAGGCAAGATAAAT 58.988 43.478 0.00 0.00 0.00 1.40
5934 9483 3.411446 CACACACCTCAGGCAAGATAAA 58.589 45.455 0.00 0.00 0.00 1.40
5935 9484 2.875672 GCACACACCTCAGGCAAGATAA 60.876 50.000 0.00 0.00 0.00 1.75
5936 9485 1.339055 GCACACACCTCAGGCAAGATA 60.339 52.381 0.00 0.00 0.00 1.98
5937 9486 0.607489 GCACACACCTCAGGCAAGAT 60.607 55.000 0.00 0.00 0.00 2.40
5938 9487 1.227943 GCACACACCTCAGGCAAGA 60.228 57.895 0.00 0.00 0.00 3.02
5939 9488 1.228063 AGCACACACCTCAGGCAAG 60.228 57.895 0.00 0.00 0.00 4.01
5940 9489 1.526686 CAGCACACACCTCAGGCAA 60.527 57.895 0.00 0.00 0.00 4.52
5941 9490 2.111669 CAGCACACACCTCAGGCA 59.888 61.111 0.00 0.00 0.00 4.75
5942 9491 1.963338 GTCAGCACACACCTCAGGC 60.963 63.158 0.00 0.00 0.00 4.85
5943 9492 0.179048 TTGTCAGCACACACCTCAGG 60.179 55.000 0.00 0.00 29.76 3.86
5944 9493 1.888215 ATTGTCAGCACACACCTCAG 58.112 50.000 0.00 0.00 29.76 3.35
5945 9494 1.948834 CAATTGTCAGCACACACCTCA 59.051 47.619 0.00 0.00 29.76 3.86
5946 9495 1.949525 ACAATTGTCAGCACACACCTC 59.050 47.619 4.92 0.00 29.76 3.85
5947 9496 1.677576 CACAATTGTCAGCACACACCT 59.322 47.619 8.48 0.00 29.76 4.00
5948 9497 1.269206 CCACAATTGTCAGCACACACC 60.269 52.381 8.48 0.00 29.76 4.16
5949 9498 1.269206 CCCACAATTGTCAGCACACAC 60.269 52.381 8.48 0.00 29.76 3.82
5950 9499 1.031235 CCCACAATTGTCAGCACACA 58.969 50.000 8.48 0.00 29.76 3.72
5951 9500 0.314935 CCCCACAATTGTCAGCACAC 59.685 55.000 8.48 0.00 29.76 3.82
5952 9501 0.184692 TCCCCACAATTGTCAGCACA 59.815 50.000 8.48 0.00 0.00 4.57
5953 9502 1.270550 CTTCCCCACAATTGTCAGCAC 59.729 52.381 8.48 0.00 0.00 4.40
5954 9503 1.619654 CTTCCCCACAATTGTCAGCA 58.380 50.000 8.48 0.00 0.00 4.41
5955 9504 0.890683 CCTTCCCCACAATTGTCAGC 59.109 55.000 8.48 0.00 0.00 4.26
5956 9505 1.075374 TCCCTTCCCCACAATTGTCAG 59.925 52.381 8.48 3.01 0.00 3.51
5957 9506 1.153539 TCCCTTCCCCACAATTGTCA 58.846 50.000 8.48 0.00 0.00 3.58
5958 9507 2.171003 CTTCCCTTCCCCACAATTGTC 58.829 52.381 8.48 0.00 0.00 3.18
5959 9508 1.786441 TCTTCCCTTCCCCACAATTGT 59.214 47.619 4.92 4.92 0.00 2.71
5960 9509 2.603075 TCTTCCCTTCCCCACAATTG 57.397 50.000 3.24 3.24 0.00 2.32
5961 9510 2.383338 ACATCTTCCCTTCCCCACAATT 59.617 45.455 0.00 0.00 0.00 2.32
5962 9511 2.003072 ACATCTTCCCTTCCCCACAAT 58.997 47.619 0.00 0.00 0.00 2.71
5963 9512 1.455822 ACATCTTCCCTTCCCCACAA 58.544 50.000 0.00 0.00 0.00 3.33
5964 9513 1.455822 AACATCTTCCCTTCCCCACA 58.544 50.000 0.00 0.00 0.00 4.17
5965 9514 2.604912 AAACATCTTCCCTTCCCCAC 57.395 50.000 0.00 0.00 0.00 4.61
5966 9515 3.265489 AGTAAACATCTTCCCTTCCCCA 58.735 45.455 0.00 0.00 0.00 4.96
5967 9516 4.141459 CCTAGTAAACATCTTCCCTTCCCC 60.141 50.000 0.00 0.00 0.00 4.81
5968 9517 4.473922 ACCTAGTAAACATCTTCCCTTCCC 59.526 45.833 0.00 0.00 0.00 3.97
5969 9518 5.429130 CACCTAGTAAACATCTTCCCTTCC 58.571 45.833 0.00 0.00 0.00 3.46
5970 9519 4.876679 GCACCTAGTAAACATCTTCCCTTC 59.123 45.833 0.00 0.00 0.00 3.46
5971 9520 4.288626 TGCACCTAGTAAACATCTTCCCTT 59.711 41.667 0.00 0.00 0.00 3.95
5972 9521 3.844211 TGCACCTAGTAAACATCTTCCCT 59.156 43.478 0.00 0.00 0.00 4.20
5973 9522 4.192317 CTGCACCTAGTAAACATCTTCCC 58.808 47.826 0.00 0.00 0.00 3.97
5974 9523 4.081087 TCCTGCACCTAGTAAACATCTTCC 60.081 45.833 0.00 0.00 0.00 3.46
5975 9524 5.086104 TCCTGCACCTAGTAAACATCTTC 57.914 43.478 0.00 0.00 0.00 2.87
5976 9525 4.777896 TCTCCTGCACCTAGTAAACATCTT 59.222 41.667 0.00 0.00 0.00 2.40
5977 9526 4.353777 TCTCCTGCACCTAGTAAACATCT 58.646 43.478 0.00 0.00 0.00 2.90
5978 9527 4.737855 TCTCCTGCACCTAGTAAACATC 57.262 45.455 0.00 0.00 0.00 3.06
5979 9528 4.777896 TCTTCTCCTGCACCTAGTAAACAT 59.222 41.667 0.00 0.00 0.00 2.71
5980 9529 4.021368 GTCTTCTCCTGCACCTAGTAAACA 60.021 45.833 0.00 0.00 0.00 2.83
5981 9530 4.496360 GTCTTCTCCTGCACCTAGTAAAC 58.504 47.826 0.00 0.00 0.00 2.01
5982 9531 3.514309 GGTCTTCTCCTGCACCTAGTAAA 59.486 47.826 0.00 0.00 0.00 2.01
5983 9532 3.097614 GGTCTTCTCCTGCACCTAGTAA 58.902 50.000 0.00 0.00 0.00 2.24
5984 9533 2.736347 GGTCTTCTCCTGCACCTAGTA 58.264 52.381 0.00 0.00 0.00 1.82
5985 9534 1.562783 GGTCTTCTCCTGCACCTAGT 58.437 55.000 0.00 0.00 0.00 2.57
5986 9535 0.457851 CGGTCTTCTCCTGCACCTAG 59.542 60.000 0.00 0.00 0.00 3.02
5987 9536 0.970937 CCGGTCTTCTCCTGCACCTA 60.971 60.000 0.00 0.00 0.00 3.08
5988 9537 2.286523 CCGGTCTTCTCCTGCACCT 61.287 63.158 0.00 0.00 0.00 4.00
5989 9538 2.266055 CCGGTCTTCTCCTGCACC 59.734 66.667 0.00 0.00 0.00 5.01
5990 9539 2.435059 GCCGGTCTTCTCCTGCAC 60.435 66.667 1.90 0.00 37.59 4.57
5991 9540 4.069232 CGCCGGTCTTCTCCTGCA 62.069 66.667 1.90 0.00 37.52 4.41
5992 9541 3.991536 GACGCCGGTCTTCTCCTGC 62.992 68.421 1.90 0.00 40.15 4.85
5993 9542 2.182030 GACGCCGGTCTTCTCCTG 59.818 66.667 1.90 0.00 40.15 3.86
6001 9550 1.376812 ATCCCAAAAGACGCCGGTC 60.377 57.895 1.90 0.00 43.76 4.79
6002 9551 1.674322 CATCCCAAAAGACGCCGGT 60.674 57.895 1.90 0.00 0.00 5.28
6003 9552 1.369091 CTCATCCCAAAAGACGCCGG 61.369 60.000 0.00 0.00 0.00 6.13
6004 9553 0.391130 TCTCATCCCAAAAGACGCCG 60.391 55.000 0.00 0.00 0.00 6.46
6005 9554 1.821216 TTCTCATCCCAAAAGACGCC 58.179 50.000 0.00 0.00 0.00 5.68
6006 9555 3.915437 TTTTCTCATCCCAAAAGACGC 57.085 42.857 0.00 0.00 0.00 5.19
6007 9556 6.446318 TCAAATTTTCTCATCCCAAAAGACG 58.554 36.000 0.00 0.00 0.00 4.18
6008 9557 7.661040 TCTCAAATTTTCTCATCCCAAAAGAC 58.339 34.615 0.00 0.00 0.00 3.01
6009 9558 7.039504 CCTCTCAAATTTTCTCATCCCAAAAGA 60.040 37.037 0.00 0.00 0.00 2.52
6010 9559 7.095270 CCTCTCAAATTTTCTCATCCCAAAAG 58.905 38.462 0.00 0.00 0.00 2.27
6011 9560 6.014327 CCCTCTCAAATTTTCTCATCCCAAAA 60.014 38.462 0.00 0.00 0.00 2.44
6012 9561 5.481473 CCCTCTCAAATTTTCTCATCCCAAA 59.519 40.000 0.00 0.00 0.00 3.28
6013 9562 5.018809 CCCTCTCAAATTTTCTCATCCCAA 58.981 41.667 0.00 0.00 0.00 4.12
6014 9563 4.570505 CCCCTCTCAAATTTTCTCATCCCA 60.571 45.833 0.00 0.00 0.00 4.37
6015 9564 3.956848 CCCCTCTCAAATTTTCTCATCCC 59.043 47.826 0.00 0.00 0.00 3.85
6016 9565 3.382865 GCCCCTCTCAAATTTTCTCATCC 59.617 47.826 0.00 0.00 0.00 3.51
6017 9566 3.065925 CGCCCCTCTCAAATTTTCTCATC 59.934 47.826 0.00 0.00 0.00 2.92
6018 9567 3.019564 CGCCCCTCTCAAATTTTCTCAT 58.980 45.455 0.00 0.00 0.00 2.90
6019 9568 2.039746 TCGCCCCTCTCAAATTTTCTCA 59.960 45.455 0.00 0.00 0.00 3.27
6020 9569 2.420372 GTCGCCCCTCTCAAATTTTCTC 59.580 50.000 0.00 0.00 0.00 2.87
6021 9570 2.437413 GTCGCCCCTCTCAAATTTTCT 58.563 47.619 0.00 0.00 0.00 2.52
6022 9571 1.472878 GGTCGCCCCTCTCAAATTTTC 59.527 52.381 0.00 0.00 0.00 2.29
6042 9591 1.954528 CAACAACAGGAGCAGCAGG 59.045 57.895 0.00 0.00 0.00 4.85
6074 9625 3.624777 GAAGCATTCCCAATCTCTTCCA 58.375 45.455 0.00 0.00 39.83 3.53
6088 9639 3.766545 TGTTTAAGCCTGAGGAAGCATT 58.233 40.909 0.65 0.00 0.00 3.56
6090 9641 2.949177 TGTTTAAGCCTGAGGAAGCA 57.051 45.000 0.65 0.00 0.00 3.91
6091 9642 2.424956 CCATGTTTAAGCCTGAGGAAGC 59.575 50.000 0.65 0.00 0.00 3.86
6092 9643 3.691609 GTCCATGTTTAAGCCTGAGGAAG 59.308 47.826 0.65 0.00 0.00 3.46
6093 9644 3.561313 GGTCCATGTTTAAGCCTGAGGAA 60.561 47.826 0.65 0.00 0.00 3.36
6094 9645 2.026262 GGTCCATGTTTAAGCCTGAGGA 60.026 50.000 0.65 0.00 0.00 3.71
6095 9646 2.369394 GGTCCATGTTTAAGCCTGAGG 58.631 52.381 0.00 0.00 0.00 3.86
6096 9647 2.009774 CGGTCCATGTTTAAGCCTGAG 58.990 52.381 0.00 0.00 0.00 3.35
6098 9649 2.107950 TCGGTCCATGTTTAAGCCTG 57.892 50.000 0.00 0.00 0.00 4.85
6099 9650 2.871096 TTCGGTCCATGTTTAAGCCT 57.129 45.000 0.00 0.00 0.00 4.58
6100 9651 2.817844 ACTTTCGGTCCATGTTTAAGCC 59.182 45.455 0.00 0.00 0.00 4.35
6101 9652 3.365969 CCACTTTCGGTCCATGTTTAAGC 60.366 47.826 0.00 0.00 0.00 3.09
6103 9654 3.150767 CCCACTTTCGGTCCATGTTTAA 58.849 45.455 0.00 0.00 0.00 1.52
6106 9657 0.893727 GCCCACTTTCGGTCCATGTT 60.894 55.000 0.00 0.00 0.00 2.71
6107 9658 1.303317 GCCCACTTTCGGTCCATGT 60.303 57.895 0.00 0.00 0.00 3.21
6110 9661 2.429930 CAGCCCACTTTCGGTCCA 59.570 61.111 0.00 0.00 0.00 4.02
6111 9662 3.056328 GCAGCCCACTTTCGGTCC 61.056 66.667 0.00 0.00 0.00 4.46
6112 9663 1.244019 ATTGCAGCCCACTTTCGGTC 61.244 55.000 0.00 0.00 0.00 4.79
6113 9664 0.827507 AATTGCAGCCCACTTTCGGT 60.828 50.000 0.00 0.00 0.00 4.69
6115 9666 3.296322 TTAAATTGCAGCCCACTTTCG 57.704 42.857 0.00 0.00 30.20 3.46
6116 9667 5.535043 CAATTAAATTGCAGCCCACTTTC 57.465 39.130 0.00 0.00 32.92 2.62
6128 9679 0.922717 CGGCTGGCGCAATTAAATTG 59.077 50.000 11.55 0.00 43.06 2.32
6129 9680 0.179113 CCGGCTGGCGCAATTAAATT 60.179 50.000 18.95 0.00 38.10 1.82
6130 9681 1.437160 CCGGCTGGCGCAATTAAAT 59.563 52.632 18.95 0.00 38.10 1.40
6131 9682 2.705821 CCCGGCTGGCGCAATTAAA 61.706 57.895 18.95 0.00 38.10 1.52
6132 9683 3.137459 CCCGGCTGGCGCAATTAA 61.137 61.111 18.95 0.00 38.10 1.40
6133 9684 4.418328 ACCCGGCTGGCGCAATTA 62.418 61.111 18.95 0.00 37.83 1.40
6139 9690 4.697756 TTCAAGACCCGGCTGGCG 62.698 66.667 17.39 17.39 37.83 5.69
6140 9691 3.056328 GTTCAAGACCCGGCTGGC 61.056 66.667 5.85 0.00 37.83 4.85
6141 9692 1.376037 GAGTTCAAGACCCGGCTGG 60.376 63.158 3.88 3.88 41.37 4.85
6142 9693 0.250295 TTGAGTTCAAGACCCGGCTG 60.250 55.000 0.00 0.00 0.00 4.85
6143 9694 2.142220 TTGAGTTCAAGACCCGGCT 58.858 52.632 0.00 0.00 0.00 5.52
6144 9695 4.792087 TTGAGTTCAAGACCCGGC 57.208 55.556 0.00 0.00 0.00 6.13
6152 9703 3.631250 AGCCAAAAGGTCTTGAGTTCAA 58.369 40.909 0.00 0.00 0.00 2.69
6153 9704 3.214328 GAGCCAAAAGGTCTTGAGTTCA 58.786 45.455 0.00 0.00 40.01 3.18
6154 9705 3.906014 GAGCCAAAAGGTCTTGAGTTC 57.094 47.619 0.00 0.00 40.01 3.01
6162 9713 1.239347 GGTGTCAGAGCCAAAAGGTC 58.761 55.000 0.00 0.00 43.67 3.85
6163 9714 0.550914 TGGTGTCAGAGCCAAAAGGT 59.449 50.000 0.00 0.00 0.00 3.50
6164 9715 1.542915 CATGGTGTCAGAGCCAAAAGG 59.457 52.381 0.00 0.00 38.38 3.11
6165 9716 2.233271 ACATGGTGTCAGAGCCAAAAG 58.767 47.619 0.00 0.00 38.38 2.27
6166 9717 2.363306 ACATGGTGTCAGAGCCAAAA 57.637 45.000 0.00 0.00 38.38 2.44
6167 9718 3.500448 TTACATGGTGTCAGAGCCAAA 57.500 42.857 0.00 0.00 38.38 3.28
6168 9719 3.500448 TTTACATGGTGTCAGAGCCAA 57.500 42.857 0.00 0.00 38.38 4.52
6169 9720 3.181445 ACTTTTACATGGTGTCAGAGCCA 60.181 43.478 0.00 0.00 39.33 4.75
6170 9721 3.189287 CACTTTTACATGGTGTCAGAGCC 59.811 47.826 0.00 0.00 0.00 4.70
6171 9722 3.365364 GCACTTTTACATGGTGTCAGAGC 60.365 47.826 0.00 0.00 33.96 4.09
6172 9723 3.814842 TGCACTTTTACATGGTGTCAGAG 59.185 43.478 0.00 0.00 33.96 3.35
6173 9724 3.814625 TGCACTTTTACATGGTGTCAGA 58.185 40.909 0.00 0.00 33.96 3.27
6174 9725 4.478699 CATGCACTTTTACATGGTGTCAG 58.521 43.478 0.00 0.00 39.98 3.51
6175 9726 3.305267 GCATGCACTTTTACATGGTGTCA 60.305 43.478 14.21 0.00 43.13 3.58
6176 9727 3.244976 GCATGCACTTTTACATGGTGTC 58.755 45.455 14.21 0.00 43.13 3.67
6177 9728 3.302365 GCATGCACTTTTACATGGTGT 57.698 42.857 14.21 0.00 43.13 4.16
6180 9731 4.497006 GCTAGAGCATGCACTTTTACATGG 60.497 45.833 22.83 0.32 43.13 3.66
6181 9732 4.497006 GGCTAGAGCATGCACTTTTACATG 60.497 45.833 22.83 6.41 45.19 3.21
6182 9733 3.629398 GGCTAGAGCATGCACTTTTACAT 59.371 43.478 22.83 0.00 44.36 2.29
6183 9734 3.009723 GGCTAGAGCATGCACTTTTACA 58.990 45.455 22.83 3.70 44.36 2.41
6184 9735 3.009723 TGGCTAGAGCATGCACTTTTAC 58.990 45.455 22.83 11.40 44.36 2.01
6185 9736 3.348647 TGGCTAGAGCATGCACTTTTA 57.651 42.857 22.83 4.45 44.36 1.52
6186 9737 2.205022 TGGCTAGAGCATGCACTTTT 57.795 45.000 22.83 0.00 44.36 2.27
6187 9738 2.205022 TTGGCTAGAGCATGCACTTT 57.795 45.000 22.83 0.00 44.36 2.66
6188 9739 2.022195 CATTGGCTAGAGCATGCACTT 58.978 47.619 22.83 8.33 44.36 3.16
6189 9740 1.676746 CATTGGCTAGAGCATGCACT 58.323 50.000 21.45 21.45 44.36 4.40
6190 9741 0.030369 GCATTGGCTAGAGCATGCAC 59.970 55.000 21.98 14.59 44.74 4.57
6191 9742 2.411535 GCATTGGCTAGAGCATGCA 58.588 52.632 21.98 0.00 44.74 3.96
6192 9743 0.742505 TTGCATTGGCTAGAGCATGC 59.257 50.000 10.51 10.51 45.25 4.06
6193 9744 1.066605 GGTTGCATTGGCTAGAGCATG 59.933 52.381 3.54 0.90 44.36 4.06
6194 9745 1.341285 TGGTTGCATTGGCTAGAGCAT 60.341 47.619 3.54 0.00 44.36 3.79
6195 9746 0.038021 TGGTTGCATTGGCTAGAGCA 59.962 50.000 3.54 0.00 44.36 4.26
6196 9747 1.176527 TTGGTTGCATTGGCTAGAGC 58.823 50.000 0.00 0.00 41.91 4.09
6197 9748 3.507233 TCTTTTGGTTGCATTGGCTAGAG 59.493 43.478 0.00 0.00 41.91 2.43
6198 9749 3.495331 TCTTTTGGTTGCATTGGCTAGA 58.505 40.909 0.00 0.00 41.91 2.43
6199 9750 3.940209 TCTTTTGGTTGCATTGGCTAG 57.060 42.857 0.00 0.00 41.91 3.42
6200 9751 3.119531 CGATCTTTTGGTTGCATTGGCTA 60.120 43.478 0.00 0.00 41.91 3.93
6201 9752 2.353011 CGATCTTTTGGTTGCATTGGCT 60.353 45.455 0.00 0.00 41.91 4.75
6202 9753 1.994779 CGATCTTTTGGTTGCATTGGC 59.005 47.619 0.00 0.00 41.68 4.52
6203 9754 3.574284 TCGATCTTTTGGTTGCATTGG 57.426 42.857 0.00 0.00 0.00 3.16
6204 9755 4.796830 CAGATCGATCTTTTGGTTGCATTG 59.203 41.667 25.25 6.62 34.22 2.82
6205 9756 4.701651 TCAGATCGATCTTTTGGTTGCATT 59.298 37.500 25.25 0.00 34.22 3.56
6206 9757 4.264253 TCAGATCGATCTTTTGGTTGCAT 58.736 39.130 25.25 0.00 34.22 3.96
6207 9758 3.673902 TCAGATCGATCTTTTGGTTGCA 58.326 40.909 25.25 1.75 34.22 4.08
6208 9759 4.497006 CCATCAGATCGATCTTTTGGTTGC 60.497 45.833 29.36 5.54 34.21 4.17
6209 9760 4.877823 TCCATCAGATCGATCTTTTGGTTG 59.122 41.667 32.69 22.95 37.51 3.77
6210 9761 5.102953 TCCATCAGATCGATCTTTTGGTT 57.897 39.130 32.69 16.11 37.51 3.67
6211 9762 4.760530 TCCATCAGATCGATCTTTTGGT 57.239 40.909 32.69 18.40 37.51 3.67
6212 9763 5.363101 TCTTCCATCAGATCGATCTTTTGG 58.637 41.667 30.70 30.70 37.56 3.28
6213 9764 6.200665 GTCTCTTCCATCAGATCGATCTTTTG 59.799 42.308 25.25 22.25 34.22 2.44
6214 9765 6.098124 AGTCTCTTCCATCAGATCGATCTTTT 59.902 38.462 25.25 12.66 34.22 2.27
6215 9766 5.598005 AGTCTCTTCCATCAGATCGATCTTT 59.402 40.000 25.25 13.02 34.22 2.52
6216 9767 5.139727 AGTCTCTTCCATCAGATCGATCTT 58.860 41.667 25.25 9.56 34.22 2.40
6217 9768 4.728772 AGTCTCTTCCATCAGATCGATCT 58.271 43.478 22.32 22.32 37.72 2.75
6218 9769 5.123820 CCTAGTCTCTTCCATCAGATCGATC 59.876 48.000 17.91 17.91 29.21 3.69
6219 9770 5.009631 CCTAGTCTCTTCCATCAGATCGAT 58.990 45.833 0.00 0.00 33.27 3.59
6220 9771 4.393834 CCTAGTCTCTTCCATCAGATCGA 58.606 47.826 0.00 0.00 0.00 3.59
6221 9772 3.057596 GCCTAGTCTCTTCCATCAGATCG 60.058 52.174 0.00 0.00 0.00 3.69
6222 9773 3.894427 TGCCTAGTCTCTTCCATCAGATC 59.106 47.826 0.00 0.00 0.00 2.75
6223 9774 3.896888 CTGCCTAGTCTCTTCCATCAGAT 59.103 47.826 0.00 0.00 0.00 2.90
6224 9775 3.295093 CTGCCTAGTCTCTTCCATCAGA 58.705 50.000 0.00 0.00 0.00 3.27
6225 9776 2.224018 GCTGCCTAGTCTCTTCCATCAG 60.224 54.545 0.00 0.00 0.00 2.90
6226 9777 1.759445 GCTGCCTAGTCTCTTCCATCA 59.241 52.381 0.00 0.00 0.00 3.07
6227 9778 1.759445 TGCTGCCTAGTCTCTTCCATC 59.241 52.381 0.00 0.00 0.00 3.51
6228 9779 1.484240 GTGCTGCCTAGTCTCTTCCAT 59.516 52.381 0.00 0.00 0.00 3.41
6229 9780 0.898320 GTGCTGCCTAGTCTCTTCCA 59.102 55.000 0.00 0.00 0.00 3.53
6230 9781 0.898320 TGTGCTGCCTAGTCTCTTCC 59.102 55.000 0.00 0.00 0.00 3.46
6231 9782 2.977772 ATGTGCTGCCTAGTCTCTTC 57.022 50.000 0.00 0.00 0.00 2.87
6232 9783 5.508153 CGTATAATGTGCTGCCTAGTCTCTT 60.508 44.000 0.00 0.00 0.00 2.85
6233 9784 4.022762 CGTATAATGTGCTGCCTAGTCTCT 60.023 45.833 0.00 0.00 0.00 3.10
6234 9785 4.230657 CGTATAATGTGCTGCCTAGTCTC 58.769 47.826 0.00 0.00 0.00 3.36
6235 9786 3.637229 ACGTATAATGTGCTGCCTAGTCT 59.363 43.478 0.00 0.00 0.00 3.24
6236 9787 3.978687 ACGTATAATGTGCTGCCTAGTC 58.021 45.455 0.00 0.00 0.00 2.59
6237 9788 3.383505 TGACGTATAATGTGCTGCCTAGT 59.616 43.478 0.00 0.00 0.00 2.57
6238 9789 3.977427 TGACGTATAATGTGCTGCCTAG 58.023 45.455 0.00 0.00 0.00 3.02
6239 9790 4.116961 GTTGACGTATAATGTGCTGCCTA 58.883 43.478 0.00 0.00 0.00 3.93
6240 9791 2.936498 GTTGACGTATAATGTGCTGCCT 59.064 45.455 0.00 0.00 0.00 4.75
6241 9792 2.675844 TGTTGACGTATAATGTGCTGCC 59.324 45.455 0.00 0.00 0.00 4.85
6242 9793 4.033932 TCATGTTGACGTATAATGTGCTGC 59.966 41.667 0.00 0.00 0.00 5.25
6243 9794 5.492854 GTCATGTTGACGTATAATGTGCTG 58.507 41.667 0.00 0.00 37.67 4.41
6244 9795 5.718649 GTCATGTTGACGTATAATGTGCT 57.281 39.130 0.00 0.00 37.67 4.40
6256 9807 1.071605 GAGCAGTCCGTCATGTTGAC 58.928 55.000 0.00 0.00 43.65 3.18
6257 9808 0.969149 AGAGCAGTCCGTCATGTTGA 59.031 50.000 0.00 0.00 0.00 3.18
6258 9809 1.067283 AGAGAGCAGTCCGTCATGTTG 60.067 52.381 0.00 0.00 0.00 3.33
6259 9810 1.067283 CAGAGAGCAGTCCGTCATGTT 60.067 52.381 0.00 0.00 0.00 2.71
6260 9811 0.529833 CAGAGAGCAGTCCGTCATGT 59.470 55.000 0.00 0.00 0.00 3.21
6261 9812 0.179116 CCAGAGAGCAGTCCGTCATG 60.179 60.000 0.00 0.00 0.00 3.07
6262 9813 0.613292 ACCAGAGAGCAGTCCGTCAT 60.613 55.000 0.00 0.00 0.00 3.06
6319 9870 4.870123 ATTGGTGCAAACAGAAGCATAA 57.130 36.364 0.00 0.00 43.44 1.90
6347 9898 8.469200 CATGATTACTACATTCCACAACCATTT 58.531 33.333 0.00 0.00 0.00 2.32
6359 9910 8.321353 TGACCTTGTTCTCATGATTACTACATT 58.679 33.333 0.00 0.00 0.00 2.71
6363 9914 6.818644 GCTTGACCTTGTTCTCATGATTACTA 59.181 38.462 0.00 0.00 0.00 1.82
6366 9917 4.943705 GGCTTGACCTTGTTCTCATGATTA 59.056 41.667 0.00 0.00 34.51 1.75
6372 9923 2.507484 CATGGCTTGACCTTGTTCTCA 58.493 47.619 0.00 0.00 38.50 3.27
6408 9959 0.617413 CCACAGAGGAGGATGCAAGT 59.383 55.000 0.00 0.00 41.22 3.16
6437 9988 5.283294 TGAACTCAAATGCACACATCAAAG 58.717 37.500 0.00 0.00 34.62 2.77
6441 9992 4.494350 ACTGAACTCAAATGCACACATC 57.506 40.909 0.00 0.00 34.62 3.06
6455 10006 4.281182 ACCTGTGAACTTCGATACTGAACT 59.719 41.667 0.00 0.00 0.00 3.01
6456 10007 4.557205 ACCTGTGAACTTCGATACTGAAC 58.443 43.478 0.00 0.00 0.00 3.18
6457 10008 4.866508 ACCTGTGAACTTCGATACTGAA 57.133 40.909 0.00 0.00 0.00 3.02
6458 10009 5.886474 AGATACCTGTGAACTTCGATACTGA 59.114 40.000 0.00 0.00 0.00 3.41
6459 10010 6.137794 AGATACCTGTGAACTTCGATACTG 57.862 41.667 0.00 0.00 0.00 2.74
6460 10011 7.556996 ACTTAGATACCTGTGAACTTCGATACT 59.443 37.037 0.00 0.00 0.00 2.12
6461 10012 7.705214 ACTTAGATACCTGTGAACTTCGATAC 58.295 38.462 0.00 0.00 0.00 2.24
6462 10013 7.876936 ACTTAGATACCTGTGAACTTCGATA 57.123 36.000 0.00 0.00 0.00 2.92
6463 10014 6.777213 ACTTAGATACCTGTGAACTTCGAT 57.223 37.500 0.00 0.00 0.00 3.59
6464 10015 6.585695 AACTTAGATACCTGTGAACTTCGA 57.414 37.500 0.00 0.00 0.00 3.71
6465 10016 7.653767 AAAACTTAGATACCTGTGAACTTCG 57.346 36.000 0.00 0.00 0.00 3.79


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.