Multiple sequence alignment - TraesCS2B01G318100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G318100 chr2B 100.000 5295 0 0 1 5295 453819361 453814067 0.000000e+00 9779.0
1 TraesCS2B01G318100 chr2B 97.732 485 10 1 290 774 453827531 453827048 0.000000e+00 833.0
2 TraesCS2B01G318100 chr2B 98.282 291 5 0 1 291 453828107 453827817 1.320000e-140 510.0
3 TraesCS2B01G318100 chr2B 82.569 109 17 2 14 121 684860600 684860493 1.570000e-15 95.3
4 TraesCS2B01G318100 chr2A 92.140 3588 175 49 114 3644 517915997 517912460 0.000000e+00 4964.0
5 TraesCS2B01G318100 chr2A 87.527 938 71 19 3712 4643 517912468 517911571 0.000000e+00 1042.0
6 TraesCS2B01G318100 chr2A 81.031 1028 136 31 4096 5091 517819871 517818871 0.000000e+00 763.0
7 TraesCS2B01G318100 chr2A 87.632 380 43 2 3710 4089 517910761 517910386 6.300000e-119 438.0
8 TraesCS2B01G318100 chr2A 80.556 360 55 12 4376 4733 517818206 517817860 4.070000e-66 263.0
9 TraesCS2B01G318100 chr2A 80.556 360 53 12 4376 4732 517816761 517816416 1.460000e-65 261.0
10 TraesCS2B01G318100 chr2A 85.408 233 30 4 4861 5091 517817681 517817451 6.850000e-59 239.0
11 TraesCS2B01G318100 chr2A 86.916 214 24 4 4880 5091 517817446 517817235 2.460000e-58 237.0
12 TraesCS2B01G318100 chr2D 91.029 3567 232 57 1104 4636 383301914 383298402 0.000000e+00 4734.0
13 TraesCS2B01G318100 chr2D 85.714 483 27 9 595 1047 383302394 383301924 6.210000e-129 472.0
14 TraesCS2B01G318100 chr2D 82.682 358 29 15 114 443 383303112 383302760 2.410000e-73 287.0
15 TraesCS2B01G318100 chr3B 78.956 632 103 21 1136 1761 373724 373117 2.300000e-108 403.0
16 TraesCS2B01G318100 chr3B 88.000 275 33 0 1487 1761 16462863 16462589 5.110000e-85 326.0
17 TraesCS2B01G318100 chr3D 85.818 275 39 0 1487 1761 3631983 3631709 5.190000e-75 292.0
18 TraesCS2B01G318100 chr5D 86.066 122 16 1 6 127 550555120 550555000 4.300000e-26 130.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G318100 chr2B 453814067 453819361 5294 True 9779.0 9779 100.000000 1 5295 1 chr2B.!!$R1 5294
1 TraesCS2B01G318100 chr2B 453827048 453828107 1059 True 671.5 833 98.007000 1 774 2 chr2B.!!$R3 773
2 TraesCS2B01G318100 chr2A 517910386 517915997 5611 True 2148.0 4964 89.099667 114 4643 3 chr2A.!!$R2 4529
3 TraesCS2B01G318100 chr2A 517816416 517819871 3455 True 352.6 763 82.893400 4096 5091 5 chr2A.!!$R1 995
4 TraesCS2B01G318100 chr2D 383298402 383303112 4710 True 1831.0 4734 86.475000 114 4636 3 chr2D.!!$R1 4522
5 TraesCS2B01G318100 chr3B 373117 373724 607 True 403.0 403 78.956000 1136 1761 1 chr3B.!!$R1 625

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
70 71 0.316204 GTTTCGGAGTTGAGGGACGA 59.684 55.000 0.00 0.00 0.00 4.20 F
948 1588 1.381872 CGACTCTCCCAGACCCCAT 60.382 63.158 0.00 0.00 0.00 4.00 F
1105 1748 0.174389 TGTGCTGCTAGCTAGTCTGC 59.826 55.000 25.63 25.63 42.97 4.26 F
1450 2093 0.391228 TGACCTACAGCTTCGTGCAA 59.609 50.000 0.00 0.00 45.94 4.08 F
1826 2490 1.028868 GCTGGGCACTCATGAAGGTC 61.029 60.000 0.00 0.00 0.00 3.85 F
3494 4203 1.069204 TGCCTTGCCTATCTCATCGTC 59.931 52.381 0.00 0.00 0.00 4.20 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1053 1694 0.106268 ACCCACATCCACAAGCAACA 60.106 50.000 0.00 0.0 0.00 3.33 R
2858 3558 0.307760 CTCCAATTTACGCCGGATGC 59.692 55.000 5.05 0.0 0.00 3.91 R
3054 3757 0.250553 TTGCCATTTCGACCCGACTT 60.251 50.000 0.00 0.0 34.89 3.01 R
3339 4048 1.296392 CTGTCGGAGCACATCCCAA 59.704 57.895 0.00 0.0 46.50 4.12 R
3533 4242 0.462047 AGAAAGGTCCCAATAGCGCG 60.462 55.000 0.00 0.0 0.00 6.86 R
5083 7496 0.027586 GCGCGCCAATGTTAGTTAGG 59.972 55.000 23.24 0.0 0.00 2.69 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
40 41 3.740115 TGGTTTCAAGAGTTAGAGGTGC 58.260 45.455 0.00 0.00 0.00 5.01
70 71 0.316204 GTTTCGGAGTTGAGGGACGA 59.684 55.000 0.00 0.00 0.00 4.20
192 193 2.992124 TTGTGTTCTTTCACTCCCGA 57.008 45.000 0.00 0.00 38.90 5.14
501 1104 3.444742 TCGATCCCAACTGTACGTACATT 59.555 43.478 27.50 19.92 35.36 2.71
631 1235 2.048597 TTAGGCGTGACGTGCAGG 60.049 61.111 6.91 4.53 35.53 4.85
944 1584 1.755008 CCTCCGACTCTCCCAGACC 60.755 68.421 0.00 0.00 0.00 3.85
945 1585 1.755008 CTCCGACTCTCCCAGACCC 60.755 68.421 0.00 0.00 0.00 4.46
946 1586 2.760385 CCGACTCTCCCAGACCCC 60.760 72.222 0.00 0.00 0.00 4.95
947 1587 2.037367 CGACTCTCCCAGACCCCA 59.963 66.667 0.00 0.00 0.00 4.96
948 1588 1.381872 CGACTCTCCCAGACCCCAT 60.382 63.158 0.00 0.00 0.00 4.00
949 1589 1.680522 CGACTCTCCCAGACCCCATG 61.681 65.000 0.00 0.00 0.00 3.66
950 1590 1.977293 GACTCTCCCAGACCCCATGC 61.977 65.000 0.00 0.00 0.00 4.06
951 1591 1.997311 CTCTCCCAGACCCCATGCA 60.997 63.158 0.00 0.00 0.00 3.96
952 1592 2.262774 CTCTCCCAGACCCCATGCAC 62.263 65.000 0.00 0.00 0.00 4.57
953 1593 2.204136 TCCCAGACCCCATGCACT 60.204 61.111 0.00 0.00 0.00 4.40
954 1594 2.044650 CCCAGACCCCATGCACTG 60.045 66.667 0.00 0.00 0.00 3.66
1104 1747 2.266554 GTTGTGCTGCTAGCTAGTCTG 58.733 52.381 21.62 16.96 42.97 3.51
1105 1748 0.174389 TGTGCTGCTAGCTAGTCTGC 59.826 55.000 25.63 25.63 42.97 4.26
1106 1749 0.459489 GTGCTGCTAGCTAGTCTGCT 59.541 55.000 28.85 0.00 42.97 4.24
1107 1750 1.678627 GTGCTGCTAGCTAGTCTGCTA 59.321 52.381 28.85 19.96 42.97 3.49
1108 1751 1.678627 TGCTGCTAGCTAGTCTGCTAC 59.321 52.381 28.85 13.64 42.97 3.58
1109 1752 1.953686 GCTGCTAGCTAGTCTGCTACT 59.046 52.381 25.35 0.00 43.74 2.57
1110 1753 2.287547 GCTGCTAGCTAGTCTGCTACTG 60.288 54.545 25.35 13.49 43.74 2.74
1111 1754 1.678627 TGCTAGCTAGTCTGCTACTGC 59.321 52.381 21.62 5.06 43.74 4.40
1112 1755 1.953686 GCTAGCTAGTCTGCTACTGCT 59.046 52.381 21.62 15.26 43.74 4.24
1113 1756 3.142951 GCTAGCTAGTCTGCTACTGCTA 58.857 50.000 21.62 15.63 43.74 3.49
1115 1758 3.290948 AGCTAGTCTGCTACTGCTAGT 57.709 47.619 11.78 0.00 42.10 2.57
1116 1759 2.948979 AGCTAGTCTGCTACTGCTAGTG 59.051 50.000 11.78 0.00 42.10 2.74
1117 1760 2.034053 GCTAGTCTGCTACTGCTAGTGG 59.966 54.545 2.92 0.00 39.39 4.00
1225 1868 1.746220 ACTTCGTGATCCTCTTCCTCG 59.254 52.381 0.00 0.00 0.00 4.63
1450 2093 0.391228 TGACCTACAGCTTCGTGCAA 59.609 50.000 0.00 0.00 45.94 4.08
1499 2163 5.508567 TGTGATGATTTTGCTAGGATGGAA 58.491 37.500 0.00 0.00 0.00 3.53
1665 2329 1.229082 TCCCCCTTGACGTGCTACT 60.229 57.895 0.00 0.00 0.00 2.57
1667 2331 1.258445 CCCCCTTGACGTGCTACTCT 61.258 60.000 0.00 0.00 0.00 3.24
1826 2490 1.028868 GCTGGGCACTCATGAAGGTC 61.029 60.000 0.00 0.00 0.00 3.85
1829 2493 1.028868 GGGCACTCATGAAGGTCAGC 61.029 60.000 0.00 0.00 0.00 4.26
1831 2497 1.364626 GCACTCATGAAGGTCAGCCG 61.365 60.000 0.00 0.00 40.50 5.52
1835 2501 1.137675 CTCATGAAGGTCAGCCGATGA 59.862 52.381 0.00 0.00 40.50 2.92
1840 2506 2.141517 GAAGGTCAGCCGATGATGATG 58.858 52.381 0.00 0.00 39.45 3.07
1853 2519 4.812626 CGATGATGATGATGTCAGTTTCCA 59.187 41.667 0.00 0.00 40.92 3.53
1897 2563 2.662866 CCATGACCATGCATCTTCCTT 58.337 47.619 0.00 0.00 37.49 3.36
2060 2726 4.910956 GTCGCTGCACTGACCATA 57.089 55.556 0.00 0.00 0.00 2.74
2062 2728 1.212616 GTCGCTGCACTGACCATATC 58.787 55.000 0.00 0.00 0.00 1.63
2065 2731 1.303309 GCTGCACTGACCATATCCAC 58.697 55.000 0.00 0.00 0.00 4.02
2066 2732 1.575244 CTGCACTGACCATATCCACG 58.425 55.000 0.00 0.00 0.00 4.94
2172 2838 4.565652 GGTTCTCTGGGATAACAGCAAGAA 60.566 45.833 0.00 0.00 38.36 2.52
2177 2843 5.136828 TCTGGGATAACAGCAAGAACAAAA 58.863 37.500 0.00 0.00 38.36 2.44
2182 2848 5.221244 GGATAACAGCAAGAACAAAACAGGT 60.221 40.000 0.00 0.00 0.00 4.00
2212 2878 1.135139 CCACATCTGGTGTACCTCTCG 59.865 57.143 2.32 0.00 46.44 4.04
2213 2879 2.092323 CACATCTGGTGTACCTCTCGA 58.908 52.381 2.32 0.00 42.75 4.04
2245 2911 2.494059 CCCAGACATCGTCACAACTTT 58.506 47.619 0.00 0.00 34.60 2.66
2276 2942 2.719739 CCATGAATGTTCTGGTGAGCT 58.280 47.619 0.00 0.00 0.00 4.09
2349 3019 4.151157 CAGCAAAAAGTGGCAGATAAAAGC 59.849 41.667 0.00 0.00 0.00 3.51
2357 3027 1.936547 GGCAGATAAAAGCTCAGACGG 59.063 52.381 0.00 0.00 0.00 4.79
2358 3028 2.622436 GCAGATAAAAGCTCAGACGGT 58.378 47.619 0.00 0.00 0.00 4.83
2369 3039 1.880796 CAGACGGTTGCACGACACA 60.881 57.895 3.48 0.00 37.61 3.72
2468 3150 1.896220 ATGTGGACTGCGACATGTTT 58.104 45.000 0.00 0.00 41.17 2.83
2858 3558 1.542915 CTGGGCACACAAAAGATGAGG 59.457 52.381 0.00 0.00 0.00 3.86
2885 3586 3.702330 GGCGTAAATTGGAGTATTTGGC 58.298 45.455 0.00 0.00 32.31 4.52
3054 3757 5.353400 CGCTAGACCAACCGTAGATATATCA 59.647 44.000 15.08 0.00 0.00 2.15
3060 3763 5.048224 ACCAACCGTAGATATATCAAGTCGG 60.048 44.000 23.20 23.20 41.95 4.79
3222 3927 9.877178 TTTCTCTCTATTACAGTTTCTTCCATC 57.123 33.333 0.00 0.00 0.00 3.51
3339 4048 4.096003 CCGACCCACCGGCATTCT 62.096 66.667 0.00 0.00 43.25 2.40
3356 4065 1.191489 TCTTGGGATGTGCTCCGACA 61.191 55.000 0.00 0.00 46.01 4.35
3359 4068 2.187946 GGATGTGCTCCGACAGGG 59.812 66.667 0.00 0.00 38.33 4.45
3494 4203 1.069204 TGCCTTGCCTATCTCATCGTC 59.931 52.381 0.00 0.00 0.00 4.20
3495 4204 1.069204 GCCTTGCCTATCTCATCGTCA 59.931 52.381 0.00 0.00 0.00 4.35
3530 4239 3.233355 GGCACCTTTCGAGATGTGT 57.767 52.632 11.90 0.00 0.00 3.72
3533 4242 2.415512 GGCACCTTTCGAGATGTGTTAC 59.584 50.000 11.90 1.70 0.00 2.50
3609 4318 2.037511 CACACATTTTTGCCATGACCCT 59.962 45.455 0.00 0.00 0.00 4.34
3637 4346 7.701445 ACTACATTGCTCATAGCTGAAATTTC 58.299 34.615 11.41 11.41 42.97 2.17
3650 4359 4.804608 TGAAATTTCAGTACACGTGGTG 57.195 40.909 21.57 13.97 34.70 4.17
3651 4360 4.443621 TGAAATTTCAGTACACGTGGTGA 58.556 39.130 21.57 16.08 33.64 4.02
3652 4361 5.060506 TGAAATTTCAGTACACGTGGTGAT 58.939 37.500 21.57 0.32 33.64 3.06
3653 4362 5.049749 TGAAATTTCAGTACACGTGGTGATG 60.050 40.000 21.57 12.65 33.64 3.07
3654 4363 3.462483 TTTCAGTACACGTGGTGATGT 57.538 42.857 21.57 0.00 36.96 3.06
3655 4364 2.432206 TCAGTACACGTGGTGATGTG 57.568 50.000 21.57 8.23 43.74 3.21
3656 4365 1.000394 TCAGTACACGTGGTGATGTGG 60.000 52.381 21.57 0.93 42.60 4.17
3657 4366 1.000394 CAGTACACGTGGTGATGTGGA 60.000 52.381 21.57 0.00 42.60 4.02
3658 4367 1.689813 AGTACACGTGGTGATGTGGAA 59.310 47.619 21.57 0.00 42.60 3.53
3659 4368 2.103432 AGTACACGTGGTGATGTGGAAA 59.897 45.455 21.57 0.00 42.60 3.13
3660 4369 1.305201 ACACGTGGTGATGTGGAAAC 58.695 50.000 21.57 0.00 42.60 2.78
3661 4370 1.304254 CACGTGGTGATGTGGAAACA 58.696 50.000 7.95 0.00 35.70 2.83
3690 4399 9.816354 AGTCTATGCAACTAAACAAAAATGTTT 57.184 25.926 11.23 11.23 43.49 2.83
3777 4530 1.539929 CCCAGCGGCTCTATTCTTGAG 60.540 57.143 0.00 0.00 34.87 3.02
3785 4538 4.113354 GGCTCTATTCTTGAGTTACCACG 58.887 47.826 0.00 0.00 34.30 4.94
3976 4729 2.680352 AGCACGTCCTCCGATGGT 60.680 61.111 0.00 0.00 40.70 3.55
3980 4733 3.770040 CGTCCTCCGATGGTGGCA 61.770 66.667 0.00 0.00 39.56 4.92
4001 4754 3.896133 GCACCGACGAGGCCGATA 61.896 66.667 0.00 0.00 46.52 2.92
4138 4891 4.041762 GTTCATGGTGGCCCGGGA 62.042 66.667 29.31 1.71 0.00 5.14
4190 4943 1.597854 CTGTGCTTCTGGCCGTTCA 60.598 57.895 0.00 0.00 40.92 3.18
4336 5089 6.464375 GAAGTATTCGAAGCGTAATTTTGC 57.536 37.500 3.35 0.00 34.17 3.68
4353 5106 5.941948 TTTTGCTTCTGCTTAGAACTACC 57.058 39.130 0.00 0.00 40.48 3.18
4383 5142 6.326375 TGGAACATGTAACAAACACTCAAAC 58.674 36.000 0.00 0.00 42.09 2.93
4391 5150 9.730420 ATGTAACAAACACTCAAACAGTAATTC 57.270 29.630 0.00 0.00 42.09 2.17
4395 5154 6.751888 ACAAACACTCAAACAGTAATTCAAGC 59.248 34.615 0.00 0.00 32.21 4.01
4396 5155 6.449635 AACACTCAAACAGTAATTCAAGCA 57.550 33.333 0.00 0.00 32.21 3.91
4397 5156 5.821204 ACACTCAAACAGTAATTCAAGCAC 58.179 37.500 0.00 0.00 32.21 4.40
4408 5167 7.148306 ACAGTAATTCAAGCACGTTATTAAGGG 60.148 37.037 0.00 0.00 0.00 3.95
4411 5170 5.616488 TTCAAGCACGTTATTAAGGGAAC 57.384 39.130 0.00 0.00 0.00 3.62
4433 5192 8.768019 GGAACTTTGATCCAATTCTTTCAAAAG 58.232 33.333 7.31 0.00 37.56 2.27
4437 5196 8.876275 TTTGATCCAATTCTTTCAAAAGACAG 57.124 30.769 4.71 0.00 44.18 3.51
4446 5205 4.576463 TCTTTCAAAAGACAGCAGTTCCTC 59.424 41.667 1.06 0.00 39.95 3.71
4540 6677 3.805971 GCTCCTATGCCATTTGATTTTGC 59.194 43.478 0.00 0.00 0.00 3.68
4601 6743 6.338146 TGTCCTTCATTTAGTTGATCTACGG 58.662 40.000 1.55 0.00 0.00 4.02
4656 6800 5.428793 TTTTTCTTTCTTCGCGTTTTGTG 57.571 34.783 5.77 0.00 0.00 3.33
4657 6801 3.750639 TTCTTTCTTCGCGTTTTGTGT 57.249 38.095 5.77 0.00 0.00 3.72
4660 6804 4.580528 TCTTTCTTCGCGTTTTGTGTAAC 58.419 39.130 5.77 0.00 37.35 2.50
4662 6806 5.519566 TCTTTCTTCGCGTTTTGTGTAACTA 59.480 36.000 5.77 0.00 38.04 2.24
4663 6807 4.697300 TCTTCGCGTTTTGTGTAACTAC 57.303 40.909 5.77 0.00 38.04 2.73
4664 6808 4.111198 TCTTCGCGTTTTGTGTAACTACA 58.889 39.130 5.77 0.00 38.04 2.74
4699 6843 2.540515 TCTATCTTTTCTCAAGCCGCG 58.459 47.619 0.00 0.00 0.00 6.46
4714 6858 1.553654 CGCGCGCAACTACACTATC 59.446 57.895 32.61 0.00 0.00 2.08
4715 6859 1.137459 CGCGCGCAACTACACTATCA 61.137 55.000 32.61 0.00 0.00 2.15
4724 6868 4.330074 GCAACTACACTATCATGGTCACAC 59.670 45.833 0.00 0.00 0.00 3.82
4725 6869 5.478407 CAACTACACTATCATGGTCACACA 58.522 41.667 0.00 0.00 0.00 3.72
4733 6877 1.023502 CATGGTCACACACAACTGCA 58.976 50.000 0.00 0.00 0.00 4.41
4734 6878 1.404748 CATGGTCACACACAACTGCAA 59.595 47.619 0.00 0.00 0.00 4.08
4746 6917 1.682854 CAACTGCAAACATGTCCACCT 59.317 47.619 0.00 0.00 0.00 4.00
4800 7021 0.541392 AGCTGCATGTCCATCGGTTA 59.459 50.000 1.02 0.00 0.00 2.85
4810 7031 0.931702 CCATCGGTTACGCGCAATTA 59.068 50.000 5.73 0.00 40.69 1.40
4813 7034 1.426423 TCGGTTACGCGCAATTACAA 58.574 45.000 5.73 0.00 40.69 2.41
4840 7061 0.947960 CCCGTGTACATGTGCACAAA 59.052 50.000 35.71 9.80 44.72 2.83
4855 7076 3.861276 CACAAATGCATGTCCATCACT 57.139 42.857 0.00 0.00 0.00 3.41
4856 7077 4.182693 CACAAATGCATGTCCATCACTT 57.817 40.909 0.00 0.00 0.00 3.16
4857 7078 3.924073 CACAAATGCATGTCCATCACTTG 59.076 43.478 0.00 0.00 34.01 3.16
4871 7092 1.065491 TCACTTGGACACAACTGCAGT 60.065 47.619 15.25 15.25 32.14 4.40
4887 7299 1.128692 GCAGTTGCACGTCTATTGACC 59.871 52.381 1.57 0.00 39.30 4.02
4891 7303 0.457853 TGCACGTCTATTGACCGAGC 60.458 55.000 1.57 7.81 39.94 5.03
4906 7319 4.046462 GACCGAGCGCAACTATATTTACA 58.954 43.478 11.47 0.00 0.00 2.41
4912 7325 7.043986 CCGAGCGCAACTATATTTACATATCTC 60.044 40.741 11.47 0.00 0.00 2.75
4984 7397 6.928492 AGAGCAAAGTAGAAGTGAAAGAGAAG 59.072 38.462 0.00 0.00 0.00 2.85
4985 7398 5.994668 AGCAAAGTAGAAGTGAAAGAGAAGG 59.005 40.000 0.00 0.00 0.00 3.46
4990 7403 7.125792 AGTAGAAGTGAAAGAGAAGGAACAA 57.874 36.000 0.00 0.00 0.00 2.83
5000 7413 8.744652 TGAAAGAGAAGGAACAACAAACAAATA 58.255 29.630 0.00 0.00 0.00 1.40
5025 7438 3.982475 TGTTGATGATTAGAGCTAGCCG 58.018 45.455 12.13 0.00 0.00 5.52
5049 7462 5.931146 GCACCCAAAATTTGTTACATGATGA 59.069 36.000 0.00 0.00 0.00 2.92
5091 7504 6.328148 TGAGTCCTCAAAAAGACCCTAACTAA 59.672 38.462 0.00 0.00 36.53 2.24
5093 7506 6.100714 AGTCCTCAAAAAGACCCTAACTAACA 59.899 38.462 0.00 0.00 33.29 2.41
5094 7507 6.940867 GTCCTCAAAAAGACCCTAACTAACAT 59.059 38.462 0.00 0.00 0.00 2.71
5095 7508 7.447545 GTCCTCAAAAAGACCCTAACTAACATT 59.552 37.037 0.00 0.00 0.00 2.71
5096 7509 7.447238 TCCTCAAAAAGACCCTAACTAACATTG 59.553 37.037 0.00 0.00 0.00 2.82
5097 7510 7.309194 CCTCAAAAAGACCCTAACTAACATTGG 60.309 40.741 0.00 0.00 0.00 3.16
5098 7511 5.977489 AAAAGACCCTAACTAACATTGGC 57.023 39.130 0.00 0.00 0.00 4.52
5099 7512 3.261981 AGACCCTAACTAACATTGGCG 57.738 47.619 0.00 0.00 0.00 5.69
5101 7514 0.655733 CCCTAACTAACATTGGCGCG 59.344 55.000 0.00 0.00 0.00 6.86
5102 7515 0.027586 CCTAACTAACATTGGCGCGC 59.972 55.000 25.94 25.94 0.00 6.86
5134 7726 1.082019 TGACATGTGGGGCCTAGGA 59.918 57.895 14.75 0.00 0.00 2.94
5173 7765 6.567602 AGGTTTCTTGCCTCTAACTCATAT 57.432 37.500 0.00 0.00 0.00 1.78
5175 7767 8.090788 AGGTTTCTTGCCTCTAACTCATATAA 57.909 34.615 0.00 0.00 0.00 0.98
5202 7845 4.587262 CCCAAAAACCCTATACCCAATAGC 59.413 45.833 0.00 0.00 36.92 2.97
5223 7891 3.318017 CCGTGTTTCGTCTTCTTCATCT 58.682 45.455 0.00 0.00 37.94 2.90
5234 7902 7.776107 TCGTCTTCTTCATCTACATCAATCTT 58.224 34.615 0.00 0.00 0.00 2.40
5235 7903 7.918033 TCGTCTTCTTCATCTACATCAATCTTC 59.082 37.037 0.00 0.00 0.00 2.87
5236 7904 7.096681 CGTCTTCTTCATCTACATCAATCTTCG 60.097 40.741 0.00 0.00 0.00 3.79
5237 7905 7.704472 GTCTTCTTCATCTACATCAATCTTCGT 59.296 37.037 0.00 0.00 0.00 3.85
5238 7906 7.918033 TCTTCTTCATCTACATCAATCTTCGTC 59.082 37.037 0.00 0.00 0.00 4.20
5239 7907 6.202226 TCTTCATCTACATCAATCTTCGTCG 58.798 40.000 0.00 0.00 0.00 5.12
5240 7908 4.290969 TCATCTACATCAATCTTCGTCGC 58.709 43.478 0.00 0.00 0.00 5.19
5241 7909 3.079960 TCTACATCAATCTTCGTCGCC 57.920 47.619 0.00 0.00 0.00 5.54
5242 7910 2.128035 CTACATCAATCTTCGTCGCCC 58.872 52.381 0.00 0.00 0.00 6.13
5253 7921 1.153568 CGTCGCCCACATGATGAGT 60.154 57.895 0.00 0.00 0.00 3.41
5268 7936 3.504520 TGATGAGTTGTGAGTAGTACGCA 59.495 43.478 2.23 2.23 0.00 5.24
5278 7946 0.110688 GTAGTACGCACGTCACGACA 60.111 55.000 2.91 0.00 0.00 4.35
5280 7948 0.453950 AGTACGCACGTCACGACATC 60.454 55.000 2.91 2.40 0.00 3.06
5281 7949 0.726787 GTACGCACGTCACGACATCA 60.727 55.000 2.91 0.00 0.00 3.07
5289 7957 1.798223 CGTCACGACATCAATGTGGTT 59.202 47.619 7.90 0.00 45.49 3.67
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
40 41 1.151668 CTCCGAAACCAGTCAGCTTG 58.848 55.000 0.00 0.00 0.00 4.01
501 1104 1.934220 GCCGTCGAGTCCAGTGATGA 61.934 60.000 0.00 0.00 0.00 2.92
631 1235 4.821589 CGAGCGAGCTTGGACCCC 62.822 72.222 2.37 0.00 0.00 4.95
690 1294 2.679450 CACGTTGTTATCCCTGACGAA 58.321 47.619 0.94 0.00 37.20 3.85
944 1584 1.245376 TGTGATGTGCAGTGCATGGG 61.245 55.000 22.87 0.00 41.91 4.00
945 1585 0.599060 TTGTGATGTGCAGTGCATGG 59.401 50.000 22.87 0.00 41.91 3.66
946 1586 2.425578 TTTGTGATGTGCAGTGCATG 57.574 45.000 22.87 0.00 41.91 4.06
947 1587 2.559231 TGATTTGTGATGTGCAGTGCAT 59.441 40.909 22.87 5.89 41.91 3.96
948 1588 1.955080 TGATTTGTGATGTGCAGTGCA 59.045 42.857 15.37 15.37 35.60 4.57
949 1589 2.710220 TGATTTGTGATGTGCAGTGC 57.290 45.000 8.58 8.58 0.00 4.40
950 1590 5.353400 ACTCTATGATTTGTGATGTGCAGTG 59.647 40.000 0.00 0.00 0.00 3.66
951 1591 5.494724 ACTCTATGATTTGTGATGTGCAGT 58.505 37.500 0.00 0.00 0.00 4.40
952 1592 6.760298 ACTACTCTATGATTTGTGATGTGCAG 59.240 38.462 0.00 0.00 0.00 4.41
953 1593 6.643388 ACTACTCTATGATTTGTGATGTGCA 58.357 36.000 0.00 0.00 0.00 4.57
954 1594 7.545362 AACTACTCTATGATTTGTGATGTGC 57.455 36.000 0.00 0.00 0.00 4.57
1051 1692 1.411977 CCCACATCCACAAGCAACAAA 59.588 47.619 0.00 0.00 0.00 2.83
1053 1694 0.106268 ACCCACATCCACAAGCAACA 60.106 50.000 0.00 0.00 0.00 3.33
1065 1707 2.156098 ACCACAGCTCCACCCACAT 61.156 57.895 0.00 0.00 0.00 3.21
1111 1754 2.147958 CGAGAGGTAGCTAGCCACTAG 58.852 57.143 19.06 14.34 37.16 2.57
1112 1755 2.257691 CGAGAGGTAGCTAGCCACTA 57.742 55.000 19.06 0.00 0.00 2.74
1113 1756 3.103637 CGAGAGGTAGCTAGCCACT 57.896 57.895 19.06 17.58 0.00 4.00
1182 1825 4.827087 AGCATCCACGCGCTCCTG 62.827 66.667 5.73 0.00 31.16 3.86
1450 2093 3.069729 ACGACACAGCTTAAGGAAGAAGT 59.930 43.478 4.29 0.00 34.25 3.01
1653 2317 0.109735 CGCAGAGAGTAGCACGTCAA 60.110 55.000 0.00 0.00 0.00 3.18
1774 2438 1.529010 TGGTCGACTGTACCGGTGT 60.529 57.895 19.93 6.55 40.08 4.16
1826 2490 2.737252 CTGACATCATCATCATCGGCTG 59.263 50.000 0.00 0.00 36.48 4.85
1829 2493 4.212847 GGAAACTGACATCATCATCATCGG 59.787 45.833 0.00 0.00 36.48 4.18
1831 2497 6.879276 ATGGAAACTGACATCATCATCATC 57.121 37.500 0.00 0.00 36.48 2.92
1835 2501 8.529424 AACATTATGGAAACTGACATCATCAT 57.471 30.769 0.00 0.00 36.48 2.45
1840 2506 6.924111 ACCAAACATTATGGAAACTGACATC 58.076 36.000 0.00 0.00 40.56 3.06
1897 2563 3.702330 CTCTGAAAGTCACACGTACACA 58.298 45.455 0.00 0.00 33.76 3.72
2060 2726 2.481276 CGATGTACATGGACACGTGGAT 60.481 50.000 21.57 5.82 37.94 3.41
2062 2728 1.277326 CGATGTACATGGACACGTGG 58.723 55.000 21.57 3.64 37.94 4.94
2065 2731 1.917955 GACACGATGTACATGGACACG 59.082 52.381 22.84 23.03 33.21 4.49
2066 2732 1.917955 CGACACGATGTACATGGACAC 59.082 52.381 22.84 6.74 30.52 3.67
2102 2768 3.846896 CGATATTAGCACGAGACGGATTC 59.153 47.826 0.00 0.00 0.00 2.52
2172 2838 3.230976 GGGAATCCTTCACCTGTTTTGT 58.769 45.455 0.00 0.00 0.00 2.83
2177 2843 1.444933 TGTGGGAATCCTTCACCTGT 58.555 50.000 0.00 0.00 29.93 4.00
2212 2878 1.625818 TGTCTGGGGCTTTTCTCTCTC 59.374 52.381 0.00 0.00 0.00 3.20
2213 2879 1.734655 TGTCTGGGGCTTTTCTCTCT 58.265 50.000 0.00 0.00 0.00 3.10
2276 2942 6.015434 TGCAACACTGTATTGAGTAGAAGAGA 60.015 38.462 2.44 0.00 0.00 3.10
2349 3019 1.299850 TGTCGTGCAACCGTCTGAG 60.300 57.895 0.00 0.00 0.00 3.35
2357 3027 4.404507 AGTATCAAATGTGTCGTGCAAC 57.595 40.909 0.00 0.00 0.00 4.17
2358 3028 6.735678 ATTAGTATCAAATGTGTCGTGCAA 57.264 33.333 0.00 0.00 0.00 4.08
2468 3150 4.514585 ACCTGCGGGTTGTTGGCA 62.515 61.111 12.85 0.00 44.73 4.92
2858 3558 0.307760 CTCCAATTTACGCCGGATGC 59.692 55.000 5.05 0.00 0.00 3.91
2885 3586 2.146342 AGTCGAACTGAAATGCACTGG 58.854 47.619 0.00 0.00 0.00 4.00
3054 3757 0.250553 TTGCCATTTCGACCCGACTT 60.251 50.000 0.00 0.00 34.89 3.01
3060 3763 3.092334 ACTTGTTTTGCCATTTCGACC 57.908 42.857 0.00 0.00 0.00 4.79
3222 3927 3.515104 ACCCACCCAATCTGCAAAAATAG 59.485 43.478 0.00 0.00 0.00 1.73
3290 3999 4.796495 GATTCCCAACCCGCCGCT 62.796 66.667 0.00 0.00 0.00 5.52
3339 4048 1.296392 CTGTCGGAGCACATCCCAA 59.704 57.895 0.00 0.00 46.50 4.12
3359 4068 4.858680 GTCAAGCTAGCCGGCCCC 62.859 72.222 26.15 12.03 0.00 5.80
3362 4071 4.096003 TGGGTCAAGCTAGCCGGC 62.096 66.667 21.89 21.89 40.01 6.13
3494 4203 3.803082 CTCATGGGCCACGCGTTG 61.803 66.667 10.22 7.75 0.00 4.10
3507 4216 1.134280 CATCTCGAAAGGTGCCCTCAT 60.134 52.381 0.00 0.00 30.89 2.90
3515 4224 2.334838 GCGTAACACATCTCGAAAGGT 58.665 47.619 0.00 0.00 0.00 3.50
3525 4234 1.134640 TCCCAATAGCGCGTAACACAT 60.135 47.619 8.43 0.00 0.00 3.21
3530 4239 0.538118 AAGGTCCCAATAGCGCGTAA 59.462 50.000 8.43 0.00 0.00 3.18
3533 4242 0.462047 AGAAAGGTCCCAATAGCGCG 60.462 55.000 0.00 0.00 0.00 6.86
3609 4318 8.737168 ATTTCAGCTATGAGCAATGTAGTAAA 57.263 30.769 0.64 0.00 45.56 2.01
3637 4346 1.000394 TCCACATCACCACGTGTACTG 60.000 52.381 15.65 8.74 34.79 2.74
3639 4348 2.157834 TTCCACATCACCACGTGTAC 57.842 50.000 15.65 0.00 34.79 2.90
3640 4349 2.158943 TGTTTCCACATCACCACGTGTA 60.159 45.455 15.65 0.00 34.79 2.90
3641 4350 1.305201 GTTTCCACATCACCACGTGT 58.695 50.000 15.65 0.00 34.79 4.49
3642 4351 1.002900 GTGTTTCCACATCACCACGTG 60.003 52.381 9.08 9.08 41.44 4.49
3643 4352 1.305201 GTGTTTCCACATCACCACGT 58.695 50.000 0.00 0.00 41.44 4.49
3644 4353 1.304254 TGTGTTTCCACATCACCACG 58.696 50.000 0.00 0.00 46.45 4.94
3653 4362 4.275936 AGTTGCATAGACTTGTGTTTCCAC 59.724 41.667 0.00 0.00 42.19 4.02
3654 4363 4.460263 AGTTGCATAGACTTGTGTTTCCA 58.540 39.130 0.00 0.00 0.00 3.53
3655 4364 6.554334 TTAGTTGCATAGACTTGTGTTTCC 57.446 37.500 0.00 0.00 0.00 3.13
3656 4365 7.414436 TGTTTAGTTGCATAGACTTGTGTTTC 58.586 34.615 0.00 0.00 0.00 2.78
3657 4366 7.328277 TGTTTAGTTGCATAGACTTGTGTTT 57.672 32.000 0.00 0.00 0.00 2.83
3658 4367 6.935741 TGTTTAGTTGCATAGACTTGTGTT 57.064 33.333 0.00 0.00 0.00 3.32
3659 4368 6.935741 TTGTTTAGTTGCATAGACTTGTGT 57.064 33.333 0.00 0.00 0.00 3.72
3660 4369 8.627487 TTTTTGTTTAGTTGCATAGACTTGTG 57.373 30.769 0.00 0.00 0.00 3.33
3661 4370 9.248291 CATTTTTGTTTAGTTGCATAGACTTGT 57.752 29.630 0.00 0.00 0.00 3.16
3662 4371 9.248291 ACATTTTTGTTTAGTTGCATAGACTTG 57.752 29.630 0.00 0.00 0.00 3.16
3663 4372 9.816354 AACATTTTTGTTTAGTTGCATAGACTT 57.184 25.926 0.00 0.00 0.00 3.01
3664 4373 9.816354 AAACATTTTTGTTTAGTTGCATAGACT 57.184 25.926 2.43 0.00 39.87 3.24
3665 4374 9.848172 CAAACATTTTTGTTTAGTTGCATAGAC 57.152 29.630 3.97 0.00 39.68 2.59
3734 4487 5.066505 GGATGCGAAAACCTTCATTAGATGT 59.933 40.000 0.00 0.00 0.00 3.06
3739 4492 3.691575 TGGGATGCGAAAACCTTCATTA 58.308 40.909 0.00 0.00 0.00 1.90
3740 4493 2.493278 CTGGGATGCGAAAACCTTCATT 59.507 45.455 0.00 0.00 0.00 2.57
3777 4530 4.365723 CATCAGGTGGTATACGTGGTAAC 58.634 47.826 0.00 0.00 43.55 2.50
4001 4754 1.071471 CGAAGGTGAACAGCCCAGT 59.929 57.895 0.29 0.00 0.00 4.00
4138 4891 1.173444 AGCACACGAACTCTCCGACT 61.173 55.000 0.00 0.00 0.00 4.18
4312 5065 5.451342 GCAAAATTACGCTTCGAATACTTCC 59.549 40.000 0.00 0.00 0.00 3.46
4336 5089 2.838202 TGGGGGTAGTTCTAAGCAGAAG 59.162 50.000 0.00 0.00 41.48 2.85
4353 5106 4.039730 TGTTTGTTACATGTTCCAATGGGG 59.960 41.667 2.30 0.00 38.37 4.96
4383 5142 7.065324 TCCCTTAATAACGTGCTTGAATTACTG 59.935 37.037 0.00 0.00 0.00 2.74
4391 5150 5.622770 AAGTTCCCTTAATAACGTGCTTG 57.377 39.130 0.00 0.00 0.00 4.01
4395 5154 6.373216 TGGATCAAAGTTCCCTTAATAACGTG 59.627 38.462 0.00 0.00 31.87 4.49
4396 5155 6.478129 TGGATCAAAGTTCCCTTAATAACGT 58.522 36.000 0.00 0.00 31.87 3.99
4397 5156 6.995511 TGGATCAAAGTTCCCTTAATAACG 57.004 37.500 0.00 0.00 31.87 3.18
4408 5167 9.533253 TCTTTTGAAAGAATTGGATCAAAGTTC 57.467 29.630 3.79 0.00 41.75 3.01
4411 5170 8.876275 TGTCTTTTGAAAGAATTGGATCAAAG 57.124 30.769 7.69 0.00 45.77 2.77
4479 5238 8.633561 TGTTAATTCTGATCTAGATGACGTCAT 58.366 33.333 30.37 30.37 39.70 3.06
4518 6655 3.805971 GCAAAATCAAATGGCATAGGAGC 59.194 43.478 0.00 0.00 0.00 4.70
4540 6677 2.355363 TTCACACGAACCTCCGCG 60.355 61.111 0.00 0.00 0.00 6.46
4576 6713 6.816640 CCGTAGATCAACTAAATGAAGGACAA 59.183 38.462 0.00 0.00 32.06 3.18
4580 6722 7.611213 AAACCGTAGATCAACTAAATGAAGG 57.389 36.000 0.00 0.00 32.06 3.46
4670 6814 9.696917 GGCTTGAGAAAAGATAGAAATGAAAAA 57.303 29.630 0.00 0.00 0.00 1.94
4673 6817 6.403636 GCGGCTTGAGAAAAGATAGAAATGAA 60.404 38.462 0.00 0.00 0.00 2.57
4682 6826 1.796796 GCGCGGCTTGAGAAAAGAT 59.203 52.632 8.83 0.00 0.00 2.40
4699 6843 2.540101 GACCATGATAGTGTAGTTGCGC 59.460 50.000 0.00 0.00 0.00 6.09
4710 6854 3.125829 GCAGTTGTGTGTGACCATGATAG 59.874 47.826 0.00 0.00 0.00 2.08
4714 6858 1.023502 TGCAGTTGTGTGTGACCATG 58.976 50.000 0.00 0.00 0.00 3.66
4715 6859 1.761449 TTGCAGTTGTGTGTGACCAT 58.239 45.000 0.00 0.00 0.00 3.55
4724 6868 2.462889 GTGGACATGTTTGCAGTTGTG 58.537 47.619 0.00 0.00 0.00 3.33
4725 6869 1.408702 GGTGGACATGTTTGCAGTTGT 59.591 47.619 0.00 0.00 0.00 3.32
4733 6877 2.951642 CAAGTGACAGGTGGACATGTTT 59.048 45.455 0.00 0.00 41.31 2.83
4734 6878 2.575532 CAAGTGACAGGTGGACATGTT 58.424 47.619 0.00 0.00 41.31 2.71
4810 7031 1.271652 TGTACACGGGGATGCAATTGT 60.272 47.619 7.40 0.00 0.00 2.71
4813 7034 1.064758 ACATGTACACGGGGATGCAAT 60.065 47.619 0.00 0.00 0.00 3.56
4823 7044 1.978097 GCATTTGTGCACATGTACACG 59.022 47.619 22.39 10.25 40.26 4.49
4853 7074 2.128771 AACTGCAGTTGTGTCCAAGT 57.871 45.000 30.66 2.58 36.80 3.16
4871 7092 1.990799 CTCGGTCAATAGACGTGCAA 58.009 50.000 0.00 0.00 45.92 4.08
4877 7098 0.645868 GTTGCGCTCGGTCAATAGAC 59.354 55.000 9.73 0.00 44.21 2.59
4878 7290 0.530744 AGTTGCGCTCGGTCAATAGA 59.469 50.000 9.73 0.00 0.00 1.98
4887 7299 7.698550 AGAGATATGTAAATATAGTTGCGCTCG 59.301 37.037 9.73 0.00 0.00 5.03
4938 7351 9.844790 TGCTCTCATATTATGTTTTGTTTCTTG 57.155 29.630 3.67 0.00 0.00 3.02
4950 7363 9.755804 TCACTTCTACTTTGCTCTCATATTATG 57.244 33.333 0.00 0.00 0.00 1.90
4955 7368 7.896811 TCTTTCACTTCTACTTTGCTCTCATA 58.103 34.615 0.00 0.00 0.00 2.15
4957 7370 6.040955 TCTCTTTCACTTCTACTTTGCTCTCA 59.959 38.462 0.00 0.00 0.00 3.27
4962 7375 5.992217 TCCTTCTCTTTCACTTCTACTTTGC 59.008 40.000 0.00 0.00 0.00 3.68
4984 7397 9.691362 ATCAACATAGTATTTGTTTGTTGTTCC 57.309 29.630 12.26 0.00 44.57 3.62
5000 7413 6.571344 CGGCTAGCTCTAATCATCAACATAGT 60.571 42.308 15.72 0.00 0.00 2.12
5025 7438 5.931146 TCATCATGTAACAAATTTTGGGTGC 59.069 36.000 13.42 5.41 34.12 5.01
5049 7462 6.479884 AGGACTCAATAGAAAAAGATGCAGT 58.520 36.000 0.00 0.00 0.00 4.40
5080 7493 1.669265 GCGCCAATGTTAGTTAGGGTC 59.331 52.381 0.00 0.00 0.00 4.46
5083 7496 0.027586 GCGCGCCAATGTTAGTTAGG 59.972 55.000 23.24 0.00 0.00 2.69
5091 7504 3.197790 CAGCTAGCGCGCCAATGT 61.198 61.111 30.33 11.88 42.32 2.71
5115 7707 1.224592 CCTAGGCCCCACATGTCAC 59.775 63.158 0.00 0.00 0.00 3.67
5116 7708 0.548926 TTCCTAGGCCCCACATGTCA 60.549 55.000 2.96 0.00 0.00 3.58
5144 7736 5.783875 AGTTAGAGGCAAGAAACCTAAGGTA 59.216 40.000 0.00 0.00 37.77 3.08
5173 7765 7.294662 TGGGTATAGGGTTTTTGGGTATTTA 57.705 36.000 0.00 0.00 0.00 1.40
5175 7767 5.817483 TGGGTATAGGGTTTTTGGGTATT 57.183 39.130 0.00 0.00 0.00 1.89
5178 7770 4.703101 ATTGGGTATAGGGTTTTTGGGT 57.297 40.909 0.00 0.00 0.00 4.51
5186 7778 1.975680 CACGGCTATTGGGTATAGGGT 59.024 52.381 0.00 0.00 37.32 4.34
5189 7781 3.739300 CGAAACACGGCTATTGGGTATAG 59.261 47.826 0.00 0.00 39.44 1.31
5191 7783 2.557317 CGAAACACGGCTATTGGGTAT 58.443 47.619 0.00 0.00 38.46 2.73
5193 7785 2.849081 CGAAACACGGCTATTGGGT 58.151 52.632 0.00 0.00 38.46 4.51
5223 7891 1.478916 TGGGCGACGAAGATTGATGTA 59.521 47.619 0.00 0.00 0.00 2.29
5234 7902 1.141665 CTCATCATGTGGGCGACGA 59.858 57.895 0.00 0.00 0.00 4.20
5235 7903 0.740868 AACTCATCATGTGGGCGACG 60.741 55.000 0.00 0.00 0.00 5.12
5236 7904 0.729116 CAACTCATCATGTGGGCGAC 59.271 55.000 0.00 0.00 0.00 5.19
5237 7905 0.324614 ACAACTCATCATGTGGGCGA 59.675 50.000 0.00 0.00 0.00 5.54
5238 7906 0.448990 CACAACTCATCATGTGGGCG 59.551 55.000 0.00 0.00 42.46 6.13
5239 7907 1.741706 CTCACAACTCATCATGTGGGC 59.258 52.381 6.11 0.00 45.41 5.36
5241 7909 4.825422 ACTACTCACAACTCATCATGTGG 58.175 43.478 6.11 0.75 45.41 4.17
5242 7910 5.513141 CGTACTACTCACAACTCATCATGTG 59.487 44.000 0.00 0.00 46.44 3.21
5253 7921 1.603326 TGACGTGCGTACTACTCACAA 59.397 47.619 9.44 0.00 33.72 3.33
5268 7936 1.270094 ACCACATTGATGTCGTGACGT 60.270 47.619 4.40 0.00 39.39 4.34


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.