Multiple sequence alignment - TraesCS2B01G311500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G311500 chr2B 100.000 3639 0 0 1 3639 445495644 445499282 0.000000e+00 6721.0
1 TraesCS2B01G311500 chr2B 96.070 229 8 1 2997 3224 176251756 176251984 4.440000e-99 372.0
2 TraesCS2B01G311500 chr2B 95.690 232 7 3 3000 3230 189401311 189401082 1.600000e-98 370.0
3 TraesCS2B01G311500 chr2B 88.421 95 6 5 3270 3361 730032914 730033006 3.840000e-20 110.0
4 TraesCS2B01G311500 chr2D 92.918 2104 72 29 673 2736 375256072 375258138 0.000000e+00 2988.0
5 TraesCS2B01G311500 chr2D 82.110 436 41 15 3237 3639 375258135 375258566 4.500000e-89 339.0
6 TraesCS2B01G311500 chr2D 91.525 118 5 2 543 655 375255965 375256082 1.350000e-34 158.0
7 TraesCS2B01G311500 chr2A 93.472 1869 69 13 883 2736 507603286 507605116 0.000000e+00 2726.0
8 TraesCS2B01G311500 chr2A 90.805 261 20 4 2736 2993 753598880 753598621 2.690000e-91 346.0
9 TraesCS2B01G311500 chr2A 83.429 175 9 6 673 836 507603121 507603286 1.050000e-30 145.0
10 TraesCS2B01G311500 chr2A 86.957 115 11 2 545 655 507603017 507603131 3.810000e-25 126.0
11 TraesCS2B01G311500 chr4B 94.766 535 26 2 1 535 600369715 600370247 0.000000e+00 832.0
12 TraesCS2B01G311500 chr4B 96.053 228 8 1 3000 3226 123290360 123290133 1.600000e-98 370.0
13 TraesCS2B01G311500 chr7B 93.358 542 28 2 1 535 723894598 723895138 0.000000e+00 795.0
14 TraesCS2B01G311500 chr7B 96.491 228 7 1 3000 3226 348455891 348455664 3.430000e-100 375.0
15 TraesCS2B01G311500 chrUn 89.286 420 21 8 1 420 41815159 41815554 4.190000e-139 505.0
16 TraesCS2B01G311500 chrUn 96.121 232 8 1 3000 3230 119206277 119206046 9.540000e-101 377.0
17 TraesCS2B01G311500 chrUn 96.491 228 7 1 2997 3223 59805098 59805325 3.430000e-100 375.0
18 TraesCS2B01G311500 chr5A 96.296 243 9 0 1938 2180 501850980 501851222 2.040000e-107 399.0
19 TraesCS2B01G311500 chr1A 95.885 243 10 0 1938 2180 540182259 540182017 9.470000e-106 394.0
20 TraesCS2B01G311500 chr1A 83.796 216 21 6 2192 2407 549330359 549330560 3.710000e-45 193.0
21 TraesCS2B01G311500 chr6B 95.455 242 11 0 1939 2180 188499807 188499566 1.580000e-103 387.0
22 TraesCS2B01G311500 chr6B 96.491 228 7 1 2997 3223 226091836 226092063 3.430000e-100 375.0
23 TraesCS2B01G311500 chr6B 86.207 87 12 0 3271 3357 712257862 712257948 1.080000e-15 95.3
24 TraesCS2B01G311500 chr6B 86.364 88 7 4 3273 3357 157020700 157020785 1.390000e-14 91.6
25 TraesCS2B01G311500 chr3B 96.507 229 7 1 2997 3224 798008226 798008454 9.540000e-101 377.0
26 TraesCS2B01G311500 chr3B 85.388 219 21 4 2195 2413 709286548 709286755 2.200000e-52 217.0
27 TraesCS2B01G311500 chr5B 96.104 231 8 1 2997 3226 480678726 480678496 3.430000e-100 375.0
28 TraesCS2B01G311500 chr5B 86.585 82 7 4 2196 2276 457026308 457026230 1.800000e-13 87.9
29 TraesCS2B01G311500 chr6D 90.875 263 21 3 2734 2994 345049198 345049459 2.080000e-92 350.0
30 TraesCS2B01G311500 chr1D 90.335 269 21 4 2730 2994 33264703 33264970 7.480000e-92 348.0
31 TraesCS2B01G311500 chr1D 86.036 222 20 6 2192 2413 490742977 490742767 1.020000e-55 228.0
32 TraesCS2B01G311500 chr3A 90.189 265 22 4 2732 2993 750329394 750329657 3.480000e-90 342.0
33 TraesCS2B01G311500 chr3A 75.362 138 26 6 2294 2427 597920151 597920284 3.920000e-05 60.2
34 TraesCS2B01G311500 chr3D 89.640 222 12 6 2192 2413 15994220 15994430 4.630000e-69 272.0
35 TraesCS2B01G311500 chr3D 75.362 138 26 6 2294 2427 455716658 455716791 3.920000e-05 60.2
36 TraesCS2B01G311500 chr4D 88.128 219 12 7 2195 2413 196877510 196877306 7.800000e-62 248.0
37 TraesCS2B01G311500 chr5D 84.956 226 19 8 2188 2413 468104617 468104827 7.910000e-52 215.0
38 TraesCS2B01G311500 chr6A 82.902 193 21 5 2217 2409 29798398 29798218 2.910000e-36 163.0
39 TraesCS2B01G311500 chr6A 89.655 87 9 0 3271 3357 613347432 613347518 1.070000e-20 111.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G311500 chr2B 445495644 445499282 3638 False 6721.000000 6721 100.000000 1 3639 1 chr2B.!!$F2 3638
1 TraesCS2B01G311500 chr2D 375255965 375258566 2601 False 1161.666667 2988 88.851000 543 3639 3 chr2D.!!$F1 3096
2 TraesCS2B01G311500 chr2A 507603017 507605116 2099 False 999.000000 2726 87.952667 545 2736 3 chr2A.!!$F1 2191
3 TraesCS2B01G311500 chr4B 600369715 600370247 532 False 832.000000 832 94.766000 1 535 1 chr4B.!!$F1 534
4 TraesCS2B01G311500 chr7B 723894598 723895138 540 False 795.000000 795 93.358000 1 535 1 chr7B.!!$F1 534

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
861 886 0.253394 CCCTCCTCTTCCCTTCCCTT 60.253 60.0 0.0 0.0 0.0 3.95 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2765 2824 0.037447 GGATTAGGATGCTGGAGCCC 59.963 60.0 0.0 0.0 41.18 5.19 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
46 47 1.747444 ATTCAAGTGGAGGTGGGACT 58.253 50.000 0.00 0.00 0.00 3.85
73 74 5.614324 AGGATGTCATACCTCAAAATCGA 57.386 39.130 0.00 0.00 0.00 3.59
159 160 4.602259 CCACCTGCCACGACGTGT 62.602 66.667 25.18 4.71 0.00 4.49
174 175 2.195096 ACGTGTCGTCGAACAAATCAA 58.805 42.857 0.00 0.00 33.69 2.57
199 200 2.363795 TCGTGCTCCTCCCGGAAT 60.364 61.111 0.73 0.00 39.29 3.01
224 225 4.812476 CGCCAATCCGCTCCGTCA 62.812 66.667 0.00 0.00 0.00 4.35
260 261 2.125106 GTTTCCCGCAGATCCGCT 60.125 61.111 0.00 0.00 0.00 5.52
333 334 0.858139 AGAGAGGGGGAAGAGGAGGT 60.858 60.000 0.00 0.00 0.00 3.85
336 337 3.412408 GGGGGAAGAGGAGGTGGC 61.412 72.222 0.00 0.00 0.00 5.01
338 339 3.787001 GGGAAGAGGAGGTGGCGG 61.787 72.222 0.00 0.00 0.00 6.13
374 375 1.749638 GAGGAAGACGAGGAGGCGA 60.750 63.158 0.00 0.00 34.83 5.54
379 380 3.735029 GACGAGGAGGCGACGTGT 61.735 66.667 0.00 0.00 40.29 4.49
382 383 3.371063 GAGGAGGCGACGTGTGGA 61.371 66.667 0.00 0.00 0.00 4.02
389 390 3.680786 CGACGTGTGGAGGAGGCA 61.681 66.667 0.00 0.00 0.00 4.75
399 400 1.671901 GGAGGAGGCAGAGACGAAGG 61.672 65.000 0.00 0.00 0.00 3.46
440 448 4.524714 TGGGAAGGAAACAAAATAATCGCA 59.475 37.500 0.00 0.00 0.00 5.10
490 498 2.400735 CACGGTAAATCATCGATCGACG 59.599 50.000 22.06 18.35 44.09 5.12
497 505 0.948678 TCATCGATCGACGTGGCATA 59.051 50.000 22.06 0.00 43.13 3.14
528 536 1.090052 GGCCTTTGCGCGACTCTTAT 61.090 55.000 12.10 0.00 38.85 1.73
535 543 1.084289 GCGCGACTCTTATTGGGTTT 58.916 50.000 12.10 0.00 0.00 3.27
536 544 2.273557 GCGCGACTCTTATTGGGTTTA 58.726 47.619 12.10 0.00 0.00 2.01
537 545 2.674357 GCGCGACTCTTATTGGGTTTAA 59.326 45.455 12.10 0.00 0.00 1.52
538 546 3.311596 GCGCGACTCTTATTGGGTTTAAT 59.688 43.478 12.10 0.00 0.00 1.40
539 547 4.508861 GCGCGACTCTTATTGGGTTTAATA 59.491 41.667 12.10 0.00 0.00 0.98
540 548 5.178809 GCGCGACTCTTATTGGGTTTAATAT 59.821 40.000 12.10 0.00 0.00 1.28
541 549 6.590357 CGCGACTCTTATTGGGTTTAATATG 58.410 40.000 0.00 0.00 0.00 1.78
595 606 4.096081 CACCAGGAAGAAGGTACTACTACG 59.904 50.000 0.00 0.00 38.49 3.51
596 607 3.631227 CCAGGAAGAAGGTACTACTACGG 59.369 52.174 0.00 0.00 38.49 4.02
624 638 2.586635 ACGAACGCGGCTGAAACA 60.587 55.556 12.47 0.00 43.17 2.83
736 750 3.063861 CCACGCGAGATGAAATGAAATGA 59.936 43.478 15.93 0.00 0.00 2.57
737 751 4.437255 CCACGCGAGATGAAATGAAATGAA 60.437 41.667 15.93 0.00 0.00 2.57
739 753 5.740569 CACGCGAGATGAAATGAAATGAAAT 59.259 36.000 15.93 0.00 0.00 2.17
740 754 5.740569 ACGCGAGATGAAATGAAATGAAATG 59.259 36.000 15.93 0.00 0.00 2.32
741 755 5.172591 CGCGAGATGAAATGAAATGAAATGG 59.827 40.000 0.00 0.00 0.00 3.16
742 756 5.461078 GCGAGATGAAATGAAATGAAATGGG 59.539 40.000 0.00 0.00 0.00 4.00
765 787 3.013932 AGGAGAGGCCAGCCCAAG 61.014 66.667 5.01 0.00 40.02 3.61
766 788 3.011517 GGAGAGGCCAGCCCAAGA 61.012 66.667 5.01 0.00 36.58 3.02
767 789 2.588989 GAGAGGCCAGCCCAAGAG 59.411 66.667 5.01 0.00 36.58 2.85
768 790 2.204059 AGAGGCCAGCCCAAGAGT 60.204 61.111 5.01 0.00 36.58 3.24
769 791 2.045536 GAGGCCAGCCCAAGAGTG 60.046 66.667 5.01 0.00 36.58 3.51
770 792 4.357279 AGGCCAGCCCAAGAGTGC 62.357 66.667 5.01 0.00 36.58 4.40
789 814 1.063649 GCGCGACTCAACGGATAGA 59.936 57.895 12.10 0.00 0.00 1.98
790 815 0.317938 GCGCGACTCAACGGATAGAT 60.318 55.000 12.10 0.00 0.00 1.98
791 816 1.399572 CGCGACTCAACGGATAGATG 58.600 55.000 0.00 0.00 0.00 2.90
792 817 1.772182 GCGACTCAACGGATAGATGG 58.228 55.000 0.00 0.00 0.00 3.51
793 818 1.337071 GCGACTCAACGGATAGATGGA 59.663 52.381 0.00 0.00 0.00 3.41
794 819 2.029828 GCGACTCAACGGATAGATGGAT 60.030 50.000 0.00 0.00 0.00 3.41
795 820 3.569548 CGACTCAACGGATAGATGGATG 58.430 50.000 0.00 0.00 0.00 3.51
796 821 3.612717 CGACTCAACGGATAGATGGATGG 60.613 52.174 0.00 0.00 0.00 3.51
797 822 3.574396 GACTCAACGGATAGATGGATGGA 59.426 47.826 0.00 0.00 0.00 3.41
853 878 1.838073 TTTGCGGACCCTCCTCTTCC 61.838 60.000 0.00 0.00 33.30 3.46
854 879 3.471806 GCGGACCCTCCTCTTCCC 61.472 72.222 0.00 0.00 33.30 3.97
855 880 2.364961 CGGACCCTCCTCTTCCCT 59.635 66.667 0.00 0.00 33.30 4.20
856 881 1.306226 CGGACCCTCCTCTTCCCTT 60.306 63.158 0.00 0.00 33.30 3.95
857 882 1.331399 CGGACCCTCCTCTTCCCTTC 61.331 65.000 0.00 0.00 33.30 3.46
858 883 0.983905 GGACCCTCCTCTTCCCTTCC 60.984 65.000 0.00 0.00 32.53 3.46
859 884 0.983905 GACCCTCCTCTTCCCTTCCC 60.984 65.000 0.00 0.00 0.00 3.97
860 885 1.398234 CCCTCCTCTTCCCTTCCCT 59.602 63.158 0.00 0.00 0.00 4.20
861 886 0.253394 CCCTCCTCTTCCCTTCCCTT 60.253 60.000 0.00 0.00 0.00 3.95
862 887 1.208706 CCTCCTCTTCCCTTCCCTTC 58.791 60.000 0.00 0.00 0.00 3.46
890 915 4.388499 CACCAACCGTCTCCCCCG 62.388 72.222 0.00 0.00 0.00 5.73
1007 1036 2.549282 CGTTGCGCCACTACACAC 59.451 61.111 10.16 0.00 0.00 3.82
1009 1038 1.495584 CGTTGCGCCACTACACACTT 61.496 55.000 10.16 0.00 0.00 3.16
1024 1053 4.950050 ACACACTTCAAACACCACAAAAA 58.050 34.783 0.00 0.00 0.00 1.94
1031 1060 3.445805 TCAAACACCACAAAAACTCCTCC 59.554 43.478 0.00 0.00 0.00 4.30
1041 1070 0.329596 AAACTCCTCCATCCAGCCAC 59.670 55.000 0.00 0.00 0.00 5.01
1047 1076 0.249784 CTCCATCCAGCCACTCATCG 60.250 60.000 0.00 0.00 0.00 3.84
1048 1077 1.890979 CCATCCAGCCACTCATCGC 60.891 63.158 0.00 0.00 0.00 4.58
1050 1079 3.112205 ATCCAGCCACTCATCGCCC 62.112 63.158 0.00 0.00 0.00 6.13
1051 1080 4.100084 CCAGCCACTCATCGCCCA 62.100 66.667 0.00 0.00 0.00 5.36
1055 1084 4.082523 CCACTCATCGCCCACCGT 62.083 66.667 0.00 0.00 38.35 4.83
1066 1095 1.112113 GCCCACCGTATTCTCTCTCA 58.888 55.000 0.00 0.00 0.00 3.27
1072 1101 1.409427 CCGTATTCTCTCTCACCCACC 59.591 57.143 0.00 0.00 0.00 4.61
1077 1106 1.606601 CTCTCTCACCCACCGGTCA 60.607 63.158 2.59 0.00 42.04 4.02
1078 1107 1.152419 TCTCTCACCCACCGGTCAA 60.152 57.895 2.59 0.00 42.04 3.18
1079 1108 1.004918 CTCTCACCCACCGGTCAAC 60.005 63.158 2.59 0.00 42.04 3.18
1080 1109 1.754380 CTCTCACCCACCGGTCAACA 61.754 60.000 2.59 0.00 42.04 3.33
1110 1139 0.108019 AAGGAGGAAAGAACGCCGTT 59.892 50.000 0.16 0.16 0.00 4.44
1119 1148 1.096416 AGAACGCCGTTAGAGAGAGG 58.904 55.000 0.79 0.00 0.00 3.69
1121 1150 0.810016 AACGCCGTTAGAGAGAGGAC 59.190 55.000 0.00 0.00 0.00 3.85
1144 1173 3.991536 GAGTGCTTCTCCGTCGCCC 62.992 68.421 0.00 0.00 37.22 6.13
1146 1175 3.760035 TGCTTCTCCGTCGCCCTC 61.760 66.667 0.00 0.00 0.00 4.30
1377 1418 1.956678 GGAGAAGCCGATAAGCCGC 60.957 63.158 0.00 0.00 0.00 6.53
1573 1614 4.787280 CTCCGGCCAGGGTCCTCT 62.787 72.222 2.24 0.00 41.52 3.69
1935 1976 0.326927 GGGTGATTGGGTCCGAGAAA 59.673 55.000 0.00 0.00 0.00 2.52
2456 2509 2.358898 CGTGATGGGGATTGGATTGTTC 59.641 50.000 0.00 0.00 0.00 3.18
2457 2510 3.364549 GTGATGGGGATTGGATTGTTCA 58.635 45.455 0.00 0.00 0.00 3.18
2514 2567 1.345741 TCTGGTGTTTGAGCCTCAGAG 59.654 52.381 0.00 0.00 0.00 3.35
2515 2568 1.071385 CTGGTGTTTGAGCCTCAGAGT 59.929 52.381 0.00 0.00 0.00 3.24
2516 2569 1.070758 TGGTGTTTGAGCCTCAGAGTC 59.929 52.381 0.00 0.00 0.00 3.36
2517 2570 1.070758 GGTGTTTGAGCCTCAGAGTCA 59.929 52.381 0.00 0.00 0.00 3.41
2518 2571 2.411904 GTGTTTGAGCCTCAGAGTCAG 58.588 52.381 0.00 0.00 0.00 3.51
2519 2572 2.036475 GTGTTTGAGCCTCAGAGTCAGA 59.964 50.000 0.00 0.00 0.00 3.27
2563 2616 2.126071 GCGCTCTGCAACCTACGA 60.126 61.111 0.00 0.00 45.45 3.43
2564 2617 2.161486 GCGCTCTGCAACCTACGAG 61.161 63.158 0.00 0.00 45.45 4.18
2565 2618 1.213013 CGCTCTGCAACCTACGAGT 59.787 57.895 0.00 0.00 0.00 4.18
2566 2619 0.450583 CGCTCTGCAACCTACGAGTA 59.549 55.000 0.00 0.00 0.00 2.59
2603 2656 5.840715 TGTAATGCGTACCCGTTCATATTA 58.159 37.500 0.00 0.00 36.15 0.98
2604 2657 5.691305 TGTAATGCGTACCCGTTCATATTAC 59.309 40.000 0.00 0.00 36.15 1.89
2642 2700 9.567848 TTAAATTGCGTTTCATTCTTTCCTATC 57.432 29.630 0.00 0.00 0.00 2.08
2689 2747 3.304293 GCCTATTGCATTTTCGCTGTTTC 59.696 43.478 0.00 0.00 40.77 2.78
2693 2751 5.580911 ATTGCATTTTCGCTGTTTCTTTC 57.419 34.783 0.00 0.00 0.00 2.62
2737 2796 6.627395 ACGTCTTAGATCTGATCACTAAGG 57.373 41.667 22.08 14.15 41.60 2.69
2738 2797 5.533154 ACGTCTTAGATCTGATCACTAAGGG 59.467 44.000 22.08 18.12 41.60 3.95
2739 2798 5.563867 CGTCTTAGATCTGATCACTAAGGGC 60.564 48.000 22.08 16.66 41.60 5.19
2740 2799 5.303078 GTCTTAGATCTGATCACTAAGGGCA 59.697 44.000 22.08 8.55 41.60 5.36
2741 2800 6.014669 GTCTTAGATCTGATCACTAAGGGCAT 60.015 42.308 22.08 0.00 41.60 4.40
2742 2801 4.888326 AGATCTGATCACTAAGGGCATC 57.112 45.455 19.12 0.00 0.00 3.91
2743 2802 4.491675 AGATCTGATCACTAAGGGCATCT 58.508 43.478 19.12 0.00 0.00 2.90
2744 2803 4.527816 AGATCTGATCACTAAGGGCATCTC 59.472 45.833 19.12 0.00 0.00 2.75
2745 2804 2.968574 TCTGATCACTAAGGGCATCTCC 59.031 50.000 0.00 0.00 0.00 3.71
2746 2805 2.702478 CTGATCACTAAGGGCATCTCCA 59.298 50.000 0.00 0.00 36.21 3.86
2747 2806 3.114606 TGATCACTAAGGGCATCTCCAA 58.885 45.455 0.00 0.00 36.21 3.53
2748 2807 3.718434 TGATCACTAAGGGCATCTCCAAT 59.282 43.478 0.00 0.00 36.21 3.16
2749 2808 3.565764 TCACTAAGGGCATCTCCAATG 57.434 47.619 0.00 0.00 36.21 2.82
2750 2809 1.952296 CACTAAGGGCATCTCCAATGC 59.048 52.381 1.40 1.40 43.85 3.56
2751 2810 1.233019 CTAAGGGCATCTCCAATGCG 58.767 55.000 4.11 0.00 45.41 4.73
2752 2811 0.836606 TAAGGGCATCTCCAATGCGA 59.163 50.000 4.11 0.00 45.41 5.10
2753 2812 0.465097 AAGGGCATCTCCAATGCGAG 60.465 55.000 4.11 0.00 45.41 5.03
2754 2813 1.895707 GGGCATCTCCAATGCGAGG 60.896 63.158 4.11 0.00 45.41 4.63
2755 2814 2.550101 GGCATCTCCAATGCGAGGC 61.550 63.158 4.11 0.09 45.41 4.70
2756 2815 2.890109 GCATCTCCAATGCGAGGCG 61.890 63.158 0.00 0.00 35.17 5.52
2780 2839 3.976593 CTGGGCTCCAGCATCCTA 58.023 61.111 8.11 0.00 45.13 2.94
2781 2840 2.224821 CTGGGCTCCAGCATCCTAA 58.775 57.895 8.11 0.00 45.13 2.69
2782 2841 0.769873 CTGGGCTCCAGCATCCTAAT 59.230 55.000 8.11 0.00 45.13 1.73
2783 2842 0.767375 TGGGCTCCAGCATCCTAATC 59.233 55.000 0.03 0.00 44.36 1.75
2784 2843 0.037447 GGGCTCCAGCATCCTAATCC 59.963 60.000 0.03 0.00 44.36 3.01
2785 2844 1.063183 GGCTCCAGCATCCTAATCCT 58.937 55.000 0.03 0.00 44.36 3.24
2786 2845 1.271271 GGCTCCAGCATCCTAATCCTG 60.271 57.143 0.03 0.00 44.36 3.86
2787 2846 1.271271 GCTCCAGCATCCTAATCCTGG 60.271 57.143 0.00 0.00 44.84 4.45
2788 2847 2.053244 CTCCAGCATCCTAATCCTGGT 58.947 52.381 5.54 0.00 44.06 4.00
2789 2848 2.441001 CTCCAGCATCCTAATCCTGGTT 59.559 50.000 5.54 0.00 44.06 3.67
2790 2849 2.173356 TCCAGCATCCTAATCCTGGTTG 59.827 50.000 5.54 0.00 44.06 3.77
2791 2850 2.173356 CCAGCATCCTAATCCTGGTTGA 59.827 50.000 0.00 0.00 39.93 3.18
2792 2851 3.181436 CCAGCATCCTAATCCTGGTTGAT 60.181 47.826 0.00 0.00 39.93 2.57
2793 2852 4.467769 CAGCATCCTAATCCTGGTTGATT 58.532 43.478 0.00 0.00 38.47 2.57
2794 2853 5.456619 CCAGCATCCTAATCCTGGTTGATTA 60.457 44.000 0.00 0.00 39.93 1.75
2796 2855 4.457257 GCATCCTAATCCTGGTTGATTAGC 59.543 45.833 12.97 2.52 46.75 3.09
2797 2856 4.336889 TCCTAATCCTGGTTGATTAGCG 57.663 45.455 12.97 8.28 46.75 4.26
2798 2857 3.071023 TCCTAATCCTGGTTGATTAGCGG 59.929 47.826 12.97 4.70 46.75 5.52
2799 2858 3.181454 CCTAATCCTGGTTGATTAGCGGT 60.181 47.826 12.97 0.00 46.75 5.68
2800 2859 3.366052 AATCCTGGTTGATTAGCGGTT 57.634 42.857 0.00 0.00 33.27 4.44
2801 2860 2.107950 TCCTGGTTGATTAGCGGTTG 57.892 50.000 0.00 0.00 0.00 3.77
2802 2861 0.451783 CCTGGTTGATTAGCGGTTGC 59.548 55.000 0.00 0.00 43.24 4.17
2803 2862 0.451783 CTGGTTGATTAGCGGTTGCC 59.548 55.000 0.00 0.00 44.31 4.52
2814 2873 3.687340 CGGTTGCCGTGTTAAATCC 57.313 52.632 0.00 0.00 42.73 3.01
2815 2874 0.179210 CGGTTGCCGTGTTAAATCCG 60.179 55.000 0.00 0.00 42.73 4.18
2816 2875 0.169451 GGTTGCCGTGTTAAATCCGG 59.831 55.000 0.00 0.00 44.46 5.14
2817 2876 0.169451 GTTGCCGTGTTAAATCCGGG 59.831 55.000 0.00 0.00 41.96 5.73
2818 2877 1.587933 TTGCCGTGTTAAATCCGGGC 61.588 55.000 0.00 0.00 41.96 6.13
2819 2878 3.095032 CCGTGTTAAATCCGGGCG 58.905 61.111 0.00 0.00 38.09 6.13
2820 2879 1.742510 CCGTGTTAAATCCGGGCGT 60.743 57.895 0.00 0.00 38.09 5.68
2821 2880 1.698714 CCGTGTTAAATCCGGGCGTC 61.699 60.000 0.00 0.00 38.09 5.19
2822 2881 1.015085 CGTGTTAAATCCGGGCGTCA 61.015 55.000 0.00 0.00 0.00 4.35
2823 2882 0.445043 GTGTTAAATCCGGGCGTCAC 59.555 55.000 0.00 0.61 0.00 3.67
2824 2883 0.674269 TGTTAAATCCGGGCGTCACC 60.674 55.000 0.00 0.00 37.93 4.02
2834 2893 2.279517 GCGTCACCCTAGCCATCG 60.280 66.667 0.00 0.00 0.00 3.84
2835 2894 2.417516 CGTCACCCTAGCCATCGG 59.582 66.667 0.00 0.00 0.00 4.18
2845 2904 4.049640 GCCATCGGCGCAAAACCA 62.050 61.111 10.83 0.00 39.62 3.67
2846 2905 2.884367 CCATCGGCGCAAAACCAT 59.116 55.556 10.83 0.00 0.00 3.55
2847 2906 1.516821 CCATCGGCGCAAAACCATG 60.517 57.895 10.83 0.00 0.00 3.66
2848 2907 2.160221 CATCGGCGCAAAACCATGC 61.160 57.895 10.83 0.00 42.94 4.06
2849 2908 2.634476 ATCGGCGCAAAACCATGCA 61.634 52.632 10.83 0.00 46.76 3.96
2850 2909 2.817470 ATCGGCGCAAAACCATGCAC 62.817 55.000 10.83 0.00 46.76 4.57
2851 2910 2.738139 GGCGCAAAACCATGCACC 60.738 61.111 10.83 0.00 46.76 5.01
2852 2911 2.028778 GCGCAAAACCATGCACCA 59.971 55.556 0.30 0.00 46.76 4.17
2853 2912 2.309501 GCGCAAAACCATGCACCAC 61.310 57.895 0.30 0.00 46.76 4.16
2854 2913 2.015627 CGCAAAACCATGCACCACG 61.016 57.895 0.00 0.00 46.76 4.94
2855 2914 2.309501 GCAAAACCATGCACCACGC 61.310 57.895 0.00 0.00 45.70 5.34
2856 2915 2.015627 CAAAACCATGCACCACGCG 61.016 57.895 3.53 3.53 46.97 6.01
2857 2916 3.839642 AAAACCATGCACCACGCGC 62.840 57.895 5.73 0.00 46.97 6.86
2860 2919 4.764336 CCATGCACCACGCGCTTG 62.764 66.667 5.73 6.96 46.97 4.01
2861 2920 4.764336 CATGCACCACGCGCTTGG 62.764 66.667 29.53 29.53 46.97 3.61
2868 2927 3.357079 CACGCGCTTGGCCTCTTT 61.357 61.111 5.73 0.00 38.94 2.52
2869 2928 2.594592 ACGCGCTTGGCCTCTTTT 60.595 55.556 5.73 0.00 38.94 2.27
2870 2929 2.176792 CGCGCTTGGCCTCTTTTC 59.823 61.111 5.56 0.00 38.94 2.29
2871 2930 2.328099 CGCGCTTGGCCTCTTTTCT 61.328 57.895 5.56 0.00 38.94 2.52
2872 2931 1.856265 CGCGCTTGGCCTCTTTTCTT 61.856 55.000 5.56 0.00 38.94 2.52
2873 2932 0.109551 GCGCTTGGCCTCTTTTCTTC 60.110 55.000 3.32 0.00 34.80 2.87
2874 2933 0.523519 CGCTTGGCCTCTTTTCTTCC 59.476 55.000 3.32 0.00 0.00 3.46
2875 2934 1.884067 CGCTTGGCCTCTTTTCTTCCT 60.884 52.381 3.32 0.00 0.00 3.36
2876 2935 1.543358 GCTTGGCCTCTTTTCTTCCTG 59.457 52.381 3.32 0.00 0.00 3.86
2877 2936 1.543358 CTTGGCCTCTTTTCTTCCTGC 59.457 52.381 3.32 0.00 0.00 4.85
2878 2937 0.478072 TGGCCTCTTTTCTTCCTGCA 59.522 50.000 3.32 0.00 0.00 4.41
2879 2938 0.884514 GGCCTCTTTTCTTCCTGCAC 59.115 55.000 0.00 0.00 0.00 4.57
2880 2939 1.546548 GGCCTCTTTTCTTCCTGCACT 60.547 52.381 0.00 0.00 0.00 4.40
2881 2940 2.290323 GGCCTCTTTTCTTCCTGCACTA 60.290 50.000 0.00 0.00 0.00 2.74
2882 2941 3.412386 GCCTCTTTTCTTCCTGCACTAA 58.588 45.455 0.00 0.00 0.00 2.24
2883 2942 3.438434 GCCTCTTTTCTTCCTGCACTAAG 59.562 47.826 0.00 0.00 0.00 2.18
2884 2943 4.646572 CCTCTTTTCTTCCTGCACTAAGT 58.353 43.478 3.81 0.00 0.00 2.24
2885 2944 4.453819 CCTCTTTTCTTCCTGCACTAAGTG 59.546 45.833 3.81 0.00 36.51 3.16
2897 2956 3.698029 CACTAAGTGCTTGTGCTGTTT 57.302 42.857 0.00 0.00 40.48 2.83
2898 2957 3.365832 CACTAAGTGCTTGTGCTGTTTG 58.634 45.455 0.00 0.00 40.48 2.93
2899 2958 3.016736 ACTAAGTGCTTGTGCTGTTTGT 58.983 40.909 0.00 0.00 40.48 2.83
2900 2959 3.443681 ACTAAGTGCTTGTGCTGTTTGTT 59.556 39.130 0.00 0.00 40.48 2.83
2901 2960 2.282701 AGTGCTTGTGCTGTTTGTTG 57.717 45.000 0.00 0.00 40.48 3.33
2902 2961 1.818060 AGTGCTTGTGCTGTTTGTTGA 59.182 42.857 0.00 0.00 40.48 3.18
2903 2962 2.428171 AGTGCTTGTGCTGTTTGTTGAT 59.572 40.909 0.00 0.00 40.48 2.57
2904 2963 3.119029 AGTGCTTGTGCTGTTTGTTGATT 60.119 39.130 0.00 0.00 40.48 2.57
2905 2964 4.097741 AGTGCTTGTGCTGTTTGTTGATTA 59.902 37.500 0.00 0.00 40.48 1.75
2906 2965 4.442073 GTGCTTGTGCTGTTTGTTGATTAG 59.558 41.667 0.00 0.00 40.48 1.73
2907 2966 3.426525 GCTTGTGCTGTTTGTTGATTAGC 59.573 43.478 0.00 0.00 36.03 3.09
2908 2967 3.266541 TGTGCTGTTTGTTGATTAGCG 57.733 42.857 0.00 0.00 37.20 4.26
2909 2968 2.616376 TGTGCTGTTTGTTGATTAGCGT 59.384 40.909 0.00 0.00 37.20 5.07
2910 2969 3.226347 GTGCTGTTTGTTGATTAGCGTC 58.774 45.455 0.00 0.00 37.20 5.19
2911 2970 3.058914 GTGCTGTTTGTTGATTAGCGTCT 60.059 43.478 0.00 0.00 37.20 4.18
2912 2971 3.563808 TGCTGTTTGTTGATTAGCGTCTT 59.436 39.130 0.00 0.00 37.20 3.01
2913 2972 4.151798 GCTGTTTGTTGATTAGCGTCTTC 58.848 43.478 0.00 0.00 0.00 2.87
2914 2973 4.712763 CTGTTTGTTGATTAGCGTCTTCC 58.287 43.478 0.00 0.00 0.00 3.46
2915 2974 3.185594 TGTTTGTTGATTAGCGTCTTCCG 59.814 43.478 0.00 0.00 40.40 4.30
2916 2975 2.736144 TGTTGATTAGCGTCTTCCGT 57.264 45.000 0.00 0.00 39.32 4.69
2917 2976 3.034721 TGTTGATTAGCGTCTTCCGTT 57.965 42.857 0.00 0.00 39.32 4.44
2918 2977 2.734606 TGTTGATTAGCGTCTTCCGTTG 59.265 45.455 0.00 0.00 39.32 4.10
2919 2978 2.991190 GTTGATTAGCGTCTTCCGTTGA 59.009 45.455 0.00 0.00 39.32 3.18
2920 2979 3.306917 TGATTAGCGTCTTCCGTTGAA 57.693 42.857 0.00 0.00 39.32 2.69
2921 2980 3.655486 TGATTAGCGTCTTCCGTTGAAA 58.345 40.909 0.00 0.00 39.32 2.69
2922 2981 3.678072 TGATTAGCGTCTTCCGTTGAAAG 59.322 43.478 0.00 0.00 39.32 2.62
2923 2982 1.425412 TAGCGTCTTCCGTTGAAAGC 58.575 50.000 0.00 0.00 39.32 3.51
2924 2983 0.249911 AGCGTCTTCCGTTGAAAGCT 60.250 50.000 0.00 0.00 39.32 3.74
2925 2984 0.110644 GCGTCTTCCGTTGAAAGCTG 60.111 55.000 0.00 0.00 39.32 4.24
2926 2985 1.497991 CGTCTTCCGTTGAAAGCTGA 58.502 50.000 0.00 0.00 0.00 4.26
2927 2986 1.457303 CGTCTTCCGTTGAAAGCTGAG 59.543 52.381 0.00 0.00 0.00 3.35
2928 2987 2.755650 GTCTTCCGTTGAAAGCTGAGA 58.244 47.619 0.00 0.00 0.00 3.27
2929 2988 2.476997 GTCTTCCGTTGAAAGCTGAGAC 59.523 50.000 0.00 0.00 0.00 3.36
2930 2989 1.457303 CTTCCGTTGAAAGCTGAGACG 59.543 52.381 0.00 0.00 0.00 4.18
2931 2990 0.944311 TCCGTTGAAAGCTGAGACGC 60.944 55.000 0.00 0.00 32.78 5.19
2932 2991 0.946221 CCGTTGAAAGCTGAGACGCT 60.946 55.000 0.00 0.00 43.31 5.07
2939 2998 1.216710 AGCTGAGACGCTTAGGTGC 59.783 57.895 0.00 0.00 36.74 5.01
2940 2999 1.216710 GCTGAGACGCTTAGGTGCT 59.783 57.895 0.00 0.00 0.00 4.40
2941 3000 0.390472 GCTGAGACGCTTAGGTGCTT 60.390 55.000 0.00 0.00 0.00 3.91
2942 3001 1.941668 GCTGAGACGCTTAGGTGCTTT 60.942 52.381 0.00 0.00 0.00 3.51
2943 3002 2.417719 CTGAGACGCTTAGGTGCTTTT 58.582 47.619 0.00 0.00 0.00 2.27
2944 3003 3.585862 CTGAGACGCTTAGGTGCTTTTA 58.414 45.455 0.00 0.00 0.00 1.52
2945 3004 4.184629 CTGAGACGCTTAGGTGCTTTTAT 58.815 43.478 0.00 0.00 0.00 1.40
2946 3005 4.575885 TGAGACGCTTAGGTGCTTTTATT 58.424 39.130 0.00 0.00 0.00 1.40
2947 3006 5.001232 TGAGACGCTTAGGTGCTTTTATTT 58.999 37.500 0.00 0.00 0.00 1.40
2948 3007 5.472137 TGAGACGCTTAGGTGCTTTTATTTT 59.528 36.000 0.00 0.00 0.00 1.82
2949 3008 5.939457 AGACGCTTAGGTGCTTTTATTTTC 58.061 37.500 0.00 0.00 0.00 2.29
2950 3009 5.705905 AGACGCTTAGGTGCTTTTATTTTCT 59.294 36.000 0.00 0.00 0.00 2.52
2951 3010 6.206829 AGACGCTTAGGTGCTTTTATTTTCTT 59.793 34.615 0.00 0.00 0.00 2.52
2952 3011 6.745116 ACGCTTAGGTGCTTTTATTTTCTTT 58.255 32.000 0.00 0.00 0.00 2.52
2953 3012 7.207383 ACGCTTAGGTGCTTTTATTTTCTTTT 58.793 30.769 0.00 0.00 0.00 2.27
2954 3013 7.709182 ACGCTTAGGTGCTTTTATTTTCTTTTT 59.291 29.630 0.00 0.00 0.00 1.94
2955 3014 9.187455 CGCTTAGGTGCTTTTATTTTCTTTTTA 57.813 29.630 0.00 0.00 0.00 1.52
2987 3046 6.903883 TTTTCTTGTAAGCGCCTATCTAAG 57.096 37.500 2.29 1.92 0.00 2.18
2988 3047 5.593679 TTCTTGTAAGCGCCTATCTAAGT 57.406 39.130 2.29 0.00 0.00 2.24
2989 3048 4.933330 TCTTGTAAGCGCCTATCTAAGTG 58.067 43.478 2.29 0.00 0.00 3.16
2990 3049 3.728076 TGTAAGCGCCTATCTAAGTGG 57.272 47.619 2.29 0.00 0.00 4.00
2991 3050 2.223971 TGTAAGCGCCTATCTAAGTGGC 60.224 50.000 2.29 0.00 42.94 5.01
2992 3051 1.123928 AAGCGCCTATCTAAGTGGCT 58.876 50.000 2.29 0.00 44.09 4.75
2993 3052 1.996798 AGCGCCTATCTAAGTGGCTA 58.003 50.000 2.29 0.00 44.09 3.93
2994 3053 1.614413 AGCGCCTATCTAAGTGGCTAC 59.386 52.381 2.29 0.00 44.09 3.58
2995 3054 1.336980 GCGCCTATCTAAGTGGCTACC 60.337 57.143 0.00 0.00 44.09 3.18
2996 3055 2.240279 CGCCTATCTAAGTGGCTACCT 58.760 52.381 0.00 0.00 44.09 3.08
2997 3056 2.229302 CGCCTATCTAAGTGGCTACCTC 59.771 54.545 0.00 0.00 44.09 3.85
2998 3057 3.502356 GCCTATCTAAGTGGCTACCTCT 58.498 50.000 0.00 0.00 43.05 3.69
2999 3058 3.257127 GCCTATCTAAGTGGCTACCTCTG 59.743 52.174 0.00 0.00 43.05 3.35
3000 3059 3.829601 CCTATCTAAGTGGCTACCTCTGG 59.170 52.174 0.00 0.00 0.00 3.86
3001 3060 2.160721 TCTAAGTGGCTACCTCTGGG 57.839 55.000 0.00 0.00 38.88 4.45
3003 3062 2.188817 CTAAGTGGCTACCTCTGGGTT 58.811 52.381 0.00 0.00 44.73 4.11
3004 3063 1.446016 AAGTGGCTACCTCTGGGTTT 58.554 50.000 0.00 0.00 44.73 3.27
3005 3064 2.337359 AGTGGCTACCTCTGGGTTTA 57.663 50.000 0.00 0.00 44.73 2.01
3006 3065 2.846950 AGTGGCTACCTCTGGGTTTAT 58.153 47.619 0.00 0.00 44.73 1.40
3007 3066 3.190439 AGTGGCTACCTCTGGGTTTATT 58.810 45.455 0.00 0.00 44.73 1.40
3008 3067 3.054361 AGTGGCTACCTCTGGGTTTATTG 60.054 47.826 0.00 0.00 44.73 1.90
3009 3068 2.241176 TGGCTACCTCTGGGTTTATTGG 59.759 50.000 0.00 0.00 44.73 3.16
3010 3069 2.241430 GGCTACCTCTGGGTTTATTGGT 59.759 50.000 0.00 0.00 44.73 3.67
3011 3070 3.542648 GCTACCTCTGGGTTTATTGGTC 58.457 50.000 0.00 0.00 44.73 4.02
3012 3071 3.684697 GCTACCTCTGGGTTTATTGGTCC 60.685 52.174 0.00 0.00 44.73 4.46
3013 3072 1.639108 ACCTCTGGGTTTATTGGTCCC 59.361 52.381 0.00 0.00 44.73 4.46
3014 3073 1.063942 CCTCTGGGTTTATTGGTCCCC 60.064 57.143 0.00 0.00 40.41 4.81
3015 3074 1.638589 CTCTGGGTTTATTGGTCCCCA 59.361 52.381 0.00 0.00 44.84 4.96
3016 3075 2.244769 CTCTGGGTTTATTGGTCCCCAT 59.755 50.000 0.00 0.00 45.83 4.00
3017 3076 2.657459 TCTGGGTTTATTGGTCCCCATT 59.343 45.455 0.00 0.00 45.83 3.16
3018 3077 2.765699 CTGGGTTTATTGGTCCCCATTG 59.234 50.000 0.00 0.00 45.83 2.82
3019 3078 2.112691 TGGGTTTATTGGTCCCCATTGT 59.887 45.455 0.00 0.00 42.21 2.71
3020 3079 3.336997 TGGGTTTATTGGTCCCCATTGTA 59.663 43.478 0.00 0.00 42.21 2.41
3021 3080 4.016105 TGGGTTTATTGGTCCCCATTGTAT 60.016 41.667 0.00 0.00 42.21 2.29
3022 3081 4.966168 GGGTTTATTGGTCCCCATTGTATT 59.034 41.667 0.00 0.00 37.09 1.89
3023 3082 5.427157 GGGTTTATTGGTCCCCATTGTATTT 59.573 40.000 0.00 0.00 37.09 1.40
3024 3083 6.407639 GGGTTTATTGGTCCCCATTGTATTTC 60.408 42.308 0.00 0.00 37.09 2.17
3025 3084 6.270064 GTTTATTGGTCCCCATTGTATTTCG 58.730 40.000 0.00 0.00 31.53 3.46
3026 3085 3.443145 TTGGTCCCCATTGTATTTCGT 57.557 42.857 0.00 0.00 31.53 3.85
3027 3086 2.717390 TGGTCCCCATTGTATTTCGTG 58.283 47.619 0.00 0.00 0.00 4.35
3028 3087 1.404035 GGTCCCCATTGTATTTCGTGC 59.596 52.381 0.00 0.00 0.00 5.34
3029 3088 1.404035 GTCCCCATTGTATTTCGTGCC 59.596 52.381 0.00 0.00 0.00 5.01
3030 3089 1.004862 TCCCCATTGTATTTCGTGCCA 59.995 47.619 0.00 0.00 0.00 4.92
3031 3090 1.821753 CCCCATTGTATTTCGTGCCAA 59.178 47.619 0.00 0.00 0.00 4.52
3032 3091 2.232452 CCCCATTGTATTTCGTGCCAAA 59.768 45.455 0.00 0.00 0.00 3.28
3033 3092 3.118811 CCCCATTGTATTTCGTGCCAAAT 60.119 43.478 0.00 0.00 0.00 2.32
3034 3093 4.502962 CCCATTGTATTTCGTGCCAAATT 58.497 39.130 0.00 0.00 0.00 1.82
3035 3094 4.934602 CCCATTGTATTTCGTGCCAAATTT 59.065 37.500 0.00 0.00 0.00 1.82
3036 3095 5.411053 CCCATTGTATTTCGTGCCAAATTTT 59.589 36.000 0.00 0.00 0.00 1.82
3037 3096 6.591834 CCCATTGTATTTCGTGCCAAATTTTA 59.408 34.615 0.00 0.00 0.00 1.52
3038 3097 7.118390 CCCATTGTATTTCGTGCCAAATTTTAA 59.882 33.333 0.00 0.00 0.00 1.52
3039 3098 7.954786 CCATTGTATTTCGTGCCAAATTTTAAC 59.045 33.333 0.00 0.00 0.00 2.01
3040 3099 7.409465 TTGTATTTCGTGCCAAATTTTAACC 57.591 32.000 0.00 0.00 0.00 2.85
3041 3100 6.513180 TGTATTTCGTGCCAAATTTTAACCA 58.487 32.000 0.00 0.00 0.00 3.67
3042 3101 7.155328 TGTATTTCGTGCCAAATTTTAACCAT 58.845 30.769 0.00 0.00 0.00 3.55
3043 3102 5.914085 TTTCGTGCCAAATTTTAACCATG 57.086 34.783 0.00 0.00 0.00 3.66
3044 3103 3.919216 TCGTGCCAAATTTTAACCATGG 58.081 40.909 11.19 11.19 0.00 3.66
3045 3104 3.574396 TCGTGCCAAATTTTAACCATGGA 59.426 39.130 21.47 0.00 32.82 3.41
3046 3105 4.221703 TCGTGCCAAATTTTAACCATGGAT 59.778 37.500 21.47 9.83 32.82 3.41
3047 3106 4.934602 CGTGCCAAATTTTAACCATGGATT 59.065 37.500 21.47 11.61 32.82 3.01
3048 3107 6.071334 TCGTGCCAAATTTTAACCATGGATTA 60.071 34.615 21.47 10.56 32.82 1.75
3049 3108 6.591834 CGTGCCAAATTTTAACCATGGATTAA 59.408 34.615 21.47 15.82 32.82 1.40
3050 3109 7.118390 CGTGCCAAATTTTAACCATGGATTAAA 59.882 33.333 21.47 20.25 32.82 1.52
3051 3110 8.233868 GTGCCAAATTTTAACCATGGATTAAAC 58.766 33.333 21.47 11.88 32.59 2.01
3052 3111 8.160106 TGCCAAATTTTAACCATGGATTAAACT 58.840 29.630 21.47 15.37 32.59 2.66
3053 3112 9.660180 GCCAAATTTTAACCATGGATTAAACTA 57.340 29.630 21.47 11.38 32.59 2.24
3064 3123 9.705290 ACCATGGATTAAACTAACAAAATGTTC 57.295 29.630 21.47 0.00 40.22 3.18
3065 3124 9.703892 CCATGGATTAAACTAACAAAATGTTCA 57.296 29.630 5.56 0.00 40.22 3.18
3067 3126 8.789881 TGGATTAAACTAACAAAATGTTCACG 57.210 30.769 0.00 0.00 40.22 4.35
3068 3127 7.380065 TGGATTAAACTAACAAAATGTTCACGC 59.620 33.333 0.00 0.00 40.22 5.34
3069 3128 7.380065 GGATTAAACTAACAAAATGTTCACGCA 59.620 33.333 0.00 0.00 40.22 5.24
3070 3129 8.810652 ATTAAACTAACAAAATGTTCACGCAT 57.189 26.923 0.00 0.00 40.22 4.73
3071 3130 6.509317 AAACTAACAAAATGTTCACGCATG 57.491 33.333 0.00 0.00 40.22 4.06
3072 3131 5.181690 ACTAACAAAATGTTCACGCATGT 57.818 34.783 0.00 0.00 40.22 3.21
3073 3132 5.212194 ACTAACAAAATGTTCACGCATGTC 58.788 37.500 0.00 0.00 40.22 3.06
3074 3133 3.706802 ACAAAATGTTCACGCATGTCA 57.293 38.095 0.00 0.00 0.00 3.58
3075 3134 3.371168 ACAAAATGTTCACGCATGTCAC 58.629 40.909 0.00 0.00 0.00 3.67
3076 3135 2.704725 AAATGTTCACGCATGTCACC 57.295 45.000 0.00 0.00 0.00 4.02
3077 3136 0.516877 AATGTTCACGCATGTCACCG 59.483 50.000 0.00 0.00 0.00 4.94
3078 3137 0.320334 ATGTTCACGCATGTCACCGA 60.320 50.000 0.00 0.00 0.00 4.69
3079 3138 0.530870 TGTTCACGCATGTCACCGAA 60.531 50.000 0.00 0.00 0.00 4.30
3080 3139 0.110823 GTTCACGCATGTCACCGAAC 60.111 55.000 0.00 0.00 0.00 3.95
3081 3140 0.530870 TTCACGCATGTCACCGAACA 60.531 50.000 0.00 0.00 0.00 3.18
3082 3141 0.320334 TCACGCATGTCACCGAACAT 60.320 50.000 0.00 0.00 40.49 2.71
3083 3142 0.516877 CACGCATGTCACCGAACATT 59.483 50.000 0.00 0.00 37.78 2.71
3084 3143 1.729517 CACGCATGTCACCGAACATTA 59.270 47.619 0.00 0.00 37.78 1.90
3085 3144 2.351418 CACGCATGTCACCGAACATTAT 59.649 45.455 0.00 0.00 37.78 1.28
3086 3145 3.553917 CACGCATGTCACCGAACATTATA 59.446 43.478 0.00 0.00 37.78 0.98
3087 3146 4.211164 CACGCATGTCACCGAACATTATAT 59.789 41.667 0.00 0.00 37.78 0.86
3088 3147 4.814234 ACGCATGTCACCGAACATTATATT 59.186 37.500 0.00 0.00 37.78 1.28
3089 3148 5.295787 ACGCATGTCACCGAACATTATATTT 59.704 36.000 0.00 0.00 37.78 1.40
3090 3149 6.183360 ACGCATGTCACCGAACATTATATTTT 60.183 34.615 0.00 0.00 37.78 1.82
3091 3150 6.690957 CGCATGTCACCGAACATTATATTTTT 59.309 34.615 0.00 0.00 37.78 1.94
3092 3151 7.305361 CGCATGTCACCGAACATTATATTTTTG 60.305 37.037 0.00 0.00 37.78 2.44
3093 3152 7.700234 GCATGTCACCGAACATTATATTTTTGA 59.300 33.333 0.00 0.00 37.78 2.69
3094 3153 9.566530 CATGTCACCGAACATTATATTTTTGAA 57.433 29.630 0.00 0.00 37.78 2.69
3096 3155 9.967346 TGTCACCGAACATTATATTTTTGAAAA 57.033 25.926 0.00 0.00 0.00 2.29
3116 3175 9.834628 TTGAAAACTATGTTCAAATACGAATCC 57.165 29.630 0.00 0.00 40.96 3.01
3117 3176 9.004717 TGAAAACTATGTTCAAATACGAATCCA 57.995 29.630 0.00 0.00 32.13 3.41
3118 3177 9.834628 GAAAACTATGTTCAAATACGAATCCAA 57.165 29.630 0.00 0.00 0.00 3.53
3120 3179 9.787532 AAACTATGTTCAAATACGAATCCAATG 57.212 29.630 0.00 0.00 0.00 2.82
3121 3180 8.731275 ACTATGTTCAAATACGAATCCAATGA 57.269 30.769 0.00 0.00 0.00 2.57
3122 3181 8.830580 ACTATGTTCAAATACGAATCCAATGAG 58.169 33.333 0.00 0.00 0.00 2.90
3123 3182 7.864108 ATGTTCAAATACGAATCCAATGAGA 57.136 32.000 0.00 0.00 0.00 3.27
3124 3183 7.864108 TGTTCAAATACGAATCCAATGAGAT 57.136 32.000 0.00 0.00 0.00 2.75
3125 3184 8.956533 TGTTCAAATACGAATCCAATGAGATA 57.043 30.769 0.00 0.00 0.00 1.98
3126 3185 9.389755 TGTTCAAATACGAATCCAATGAGATAA 57.610 29.630 0.00 0.00 0.00 1.75
3135 3194 9.793252 ACGAATCCAATGAGATAATTTTTCTTG 57.207 29.630 0.00 0.00 0.00 3.02
3141 3200 8.814235 CCAATGAGATAATTTTTCTTGACATGC 58.186 33.333 0.00 0.00 0.00 4.06
3142 3201 9.361315 CAATGAGATAATTTTTCTTGACATGCA 57.639 29.630 0.00 0.00 0.00 3.96
3153 3212 9.932699 TTTTTCTTGACATGCATTAACATTTTG 57.067 25.926 0.00 0.00 0.00 2.44
3154 3213 8.659925 TTTCTTGACATGCATTAACATTTTGT 57.340 26.923 0.00 0.00 0.00 2.83
3155 3214 8.659925 TTCTTGACATGCATTAACATTTTGTT 57.340 26.923 0.00 0.00 43.88 2.83
3156 3215 9.755804 TTCTTGACATGCATTAACATTTTGTTA 57.244 25.926 0.00 0.00 41.45 2.41
3157 3216 9.409312 TCTTGACATGCATTAACATTTTGTTAG 57.591 29.630 0.00 0.00 42.93 2.34
3158 3217 9.195411 CTTGACATGCATTAACATTTTGTTAGT 57.805 29.630 0.00 0.00 42.93 2.24
3159 3218 9.539825 TTGACATGCATTAACATTTTGTTAGTT 57.460 25.926 0.00 0.00 42.93 2.24
3197 3256 1.025812 TGGCACAAACTACAAACGGG 58.974 50.000 0.00 0.00 31.92 5.28
3198 3257 1.310904 GGCACAAACTACAAACGGGA 58.689 50.000 0.00 0.00 0.00 5.14
3199 3258 1.002142 GGCACAAACTACAAACGGGAC 60.002 52.381 0.00 0.00 0.00 4.46
3200 3259 1.002142 GCACAAACTACAAACGGGACC 60.002 52.381 0.00 0.00 0.00 4.46
3201 3260 2.567985 CACAAACTACAAACGGGACCT 58.432 47.619 0.00 0.00 0.00 3.85
3202 3261 3.731089 CACAAACTACAAACGGGACCTA 58.269 45.455 0.00 0.00 0.00 3.08
3203 3262 4.320870 CACAAACTACAAACGGGACCTAT 58.679 43.478 0.00 0.00 0.00 2.57
3204 3263 5.481105 CACAAACTACAAACGGGACCTATA 58.519 41.667 0.00 0.00 0.00 1.31
3205 3264 5.933463 CACAAACTACAAACGGGACCTATAA 59.067 40.000 0.00 0.00 0.00 0.98
3206 3265 6.427547 CACAAACTACAAACGGGACCTATAAA 59.572 38.462 0.00 0.00 0.00 1.40
3207 3266 6.427853 ACAAACTACAAACGGGACCTATAAAC 59.572 38.462 0.00 0.00 0.00 2.01
3208 3267 5.089970 ACTACAAACGGGACCTATAAACC 57.910 43.478 0.00 0.00 0.00 3.27
3209 3268 4.531732 ACTACAAACGGGACCTATAAACCA 59.468 41.667 0.00 0.00 0.00 3.67
3210 3269 3.946606 ACAAACGGGACCTATAAACCAG 58.053 45.455 0.00 0.00 0.00 4.00
3211 3270 3.275999 CAAACGGGACCTATAAACCAGG 58.724 50.000 0.00 0.00 39.25 4.45
3212 3271 2.555732 ACGGGACCTATAAACCAGGA 57.444 50.000 0.00 0.00 36.61 3.86
3213 3272 2.836667 ACGGGACCTATAAACCAGGAA 58.163 47.619 0.00 0.00 36.61 3.36
3214 3273 2.770232 ACGGGACCTATAAACCAGGAAG 59.230 50.000 0.00 0.00 36.61 3.46
3215 3274 3.036091 CGGGACCTATAAACCAGGAAGA 58.964 50.000 0.00 0.00 36.61 2.87
3216 3275 3.069729 CGGGACCTATAAACCAGGAAGAG 59.930 52.174 0.00 0.00 36.61 2.85
3217 3276 3.391626 GGGACCTATAAACCAGGAAGAGG 59.608 52.174 0.00 0.00 36.61 3.69
3218 3277 4.038633 GGACCTATAAACCAGGAAGAGGT 58.961 47.826 7.10 7.10 42.34 3.85
3219 3278 5.214293 GGACCTATAAACCAGGAAGAGGTA 58.786 45.833 7.30 0.00 38.76 3.08
3220 3279 5.304871 GGACCTATAAACCAGGAAGAGGTAG 59.695 48.000 7.30 0.00 38.76 3.18
3221 3280 5.851418 ACCTATAAACCAGGAAGAGGTAGT 58.149 41.667 0.00 0.00 38.76 2.73
3222 3281 6.989894 ACCTATAAACCAGGAAGAGGTAGTA 58.010 40.000 0.00 0.00 38.76 1.82
3223 3282 7.068061 ACCTATAAACCAGGAAGAGGTAGTAG 58.932 42.308 0.00 0.00 38.76 2.57
3224 3283 5.873146 ATAAACCAGGAAGAGGTAGTAGC 57.127 43.478 0.00 0.00 38.76 3.58
3225 3284 2.921834 ACCAGGAAGAGGTAGTAGCA 57.078 50.000 1.58 0.00 37.67 3.49
3226 3285 3.406512 ACCAGGAAGAGGTAGTAGCAT 57.593 47.619 1.58 0.00 37.67 3.79
3227 3286 3.034635 ACCAGGAAGAGGTAGTAGCATG 58.965 50.000 1.58 0.00 37.67 4.06
3228 3287 3.034635 CCAGGAAGAGGTAGTAGCATGT 58.965 50.000 1.58 0.00 0.00 3.21
3229 3288 4.215908 CCAGGAAGAGGTAGTAGCATGTA 58.784 47.826 1.58 0.00 0.00 2.29
3230 3289 4.649674 CCAGGAAGAGGTAGTAGCATGTAA 59.350 45.833 1.58 0.00 0.00 2.41
3231 3290 5.128827 CCAGGAAGAGGTAGTAGCATGTAAA 59.871 44.000 1.58 0.00 0.00 2.01
3232 3291 6.183361 CCAGGAAGAGGTAGTAGCATGTAAAT 60.183 42.308 1.58 0.00 0.00 1.40
3233 3292 6.703607 CAGGAAGAGGTAGTAGCATGTAAATG 59.296 42.308 1.58 0.00 0.00 2.32
3244 3303 2.715268 CATGTAAATGCCCTAAACGCG 58.285 47.619 3.53 3.53 0.00 6.01
3247 3306 1.707239 TAAATGCCCTAAACGCGCCG 61.707 55.000 5.73 0.00 0.00 6.46
3324 3383 4.528674 CGGAGCTGAAGTGATGGG 57.471 61.111 0.00 0.00 0.00 4.00
3328 3387 1.198713 GAGCTGAAGTGATGGGGAGA 58.801 55.000 0.00 0.00 0.00 3.71
3329 3388 1.556911 GAGCTGAAGTGATGGGGAGAA 59.443 52.381 0.00 0.00 0.00 2.87
3332 3391 1.280133 CTGAAGTGATGGGGAGAAGCA 59.720 52.381 0.00 0.00 0.00 3.91
3335 3394 1.817099 GTGATGGGGAGAAGCAGCG 60.817 63.158 0.00 0.00 0.00 5.18
3336 3395 2.899339 GATGGGGAGAAGCAGCGC 60.899 66.667 0.00 0.00 0.00 5.92
3337 3396 3.687321 GATGGGGAGAAGCAGCGCA 62.687 63.158 11.47 0.00 0.00 6.09
3351 3410 1.190763 CAGCGCACAGTTCATTTTTGC 59.809 47.619 11.47 0.00 0.00 3.68
3352 3411 1.202394 AGCGCACAGTTCATTTTTGCA 60.202 42.857 11.47 0.00 32.51 4.08
3393 3474 1.620819 ACGGAGTTGCAGAAGTGATCT 59.379 47.619 0.00 0.00 37.78 2.75
3408 3489 8.604640 AGAAGTGATCTGTTGCAGAATATATG 57.395 34.615 2.80 0.00 44.04 1.78
3410 3491 5.704515 AGTGATCTGTTGCAGAATATATGCC 59.295 40.000 9.64 0.00 44.04 4.40
3411 3492 5.005740 TGATCTGTTGCAGAATATATGCCC 58.994 41.667 9.64 2.78 44.04 5.36
3412 3493 3.402110 TCTGTTGCAGAATATATGCCCG 58.598 45.455 9.64 0.00 43.18 6.13
3413 3494 3.141398 CTGTTGCAGAATATATGCCCGT 58.859 45.455 9.64 0.00 43.18 5.28
3414 3495 4.039852 TCTGTTGCAGAATATATGCCCGTA 59.960 41.667 9.64 0.00 43.18 4.02
3415 3496 4.314961 TGTTGCAGAATATATGCCCGTAG 58.685 43.478 9.64 0.00 43.18 3.51
3416 3497 4.039852 TGTTGCAGAATATATGCCCGTAGA 59.960 41.667 9.64 0.00 43.18 2.59
3436 3524 7.042335 CGTAGACTTCCATAAACTTGAGGAAT 58.958 38.462 0.00 0.00 39.26 3.01
3437 3525 7.010552 CGTAGACTTCCATAAACTTGAGGAATG 59.989 40.741 0.00 0.00 39.26 2.67
3442 3530 6.387192 TCCATAAACTTGAGGAATGAAGGA 57.613 37.500 0.00 0.00 0.00 3.36
3445 3533 8.556589 TCCATAAACTTGAGGAATGAAGGAATA 58.443 33.333 0.00 0.00 0.00 1.75
3541 3629 7.937942 CCCTCTCAGATCATCATCATTTTTACT 59.062 37.037 0.00 0.00 0.00 2.24
3542 3630 8.775527 CCTCTCAGATCATCATCATTTTTACTG 58.224 37.037 0.00 0.00 0.00 2.74
3545 3633 9.106070 CTCAGATCATCATCATTTTTACTGTCA 57.894 33.333 0.00 0.00 0.00 3.58
3553 3641 7.223584 TCATCATTTTTACTGTCAAGTCTGGA 58.776 34.615 0.00 0.00 37.88 3.86
3585 3673 4.134379 TCTCTGAGCATTGGATCTTCAC 57.866 45.455 0.00 0.00 0.00 3.18
3593 3681 6.011122 AGCATTGGATCTTCACTTAATCCT 57.989 37.500 0.00 0.00 39.78 3.24
3595 3683 5.506982 GCATTGGATCTTCACTTAATCCTGC 60.507 44.000 0.00 0.00 39.78 4.85
3602 3690 4.406003 TCTTCACTTAATCCTGCTACTCCC 59.594 45.833 0.00 0.00 0.00 4.30
3603 3691 3.039011 TCACTTAATCCTGCTACTCCCC 58.961 50.000 0.00 0.00 0.00 4.81
3607 3695 2.270434 AATCCTGCTACTCCCCTGAA 57.730 50.000 0.00 0.00 0.00 3.02
3632 3720 8.552083 AAAAATCCTTGATTTGCTGTTAATCC 57.448 30.769 3.03 0.00 40.77 3.01
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
73 74 1.742768 GCGTCTCCATCGATTCCCT 59.257 57.895 0.00 0.00 0.00 4.20
159 160 2.475111 GCAGAGTTGATTTGTTCGACGA 59.525 45.455 0.00 0.00 42.74 4.20
224 225 1.207791 CATAGGAAGGCAGGAGGTGT 58.792 55.000 0.00 0.00 0.00 4.16
338 339 4.803426 ACTGTCGCTAGCCGCAGC 62.803 66.667 24.54 7.22 41.52 5.25
353 354 0.968393 GCCTCCTCGTCTTCCTCACT 60.968 60.000 0.00 0.00 0.00 3.41
354 355 1.513622 GCCTCCTCGTCTTCCTCAC 59.486 63.158 0.00 0.00 0.00 3.51
374 375 2.203640 TCTGCCTCCTCCACACGT 60.204 61.111 0.00 0.00 0.00 4.49
379 380 0.967887 CTTCGTCTCTGCCTCCTCCA 60.968 60.000 0.00 0.00 0.00 3.86
382 383 2.355193 GCCTTCGTCTCTGCCTCCT 61.355 63.158 0.00 0.00 0.00 3.69
465 473 2.502213 TCGATGATTTACCGTGCGAT 57.498 45.000 0.00 0.00 0.00 4.58
490 498 4.024698 CTCGCTGAGCTATGCCAC 57.975 61.111 1.78 0.00 0.00 5.01
510 518 0.727398 AATAAGAGTCGCGCAAAGGC 59.273 50.000 8.75 0.00 0.00 4.35
528 536 7.624478 TCTGGAGTACTACCATATTAAACCCAA 59.376 37.037 1.66 0.00 36.79 4.12
576 584 4.851639 TCCGTAGTAGTACCTTCTTCCT 57.148 45.455 2.06 0.00 0.00 3.36
595 606 0.442699 GCGTTCGTCTTTGACCATCC 59.557 55.000 0.00 0.00 0.00 3.51
596 607 0.093026 CGCGTTCGTCTTTGACCATC 59.907 55.000 0.00 0.00 0.00 3.51
736 750 0.627986 CCTCTCCTGCCTTCCCATTT 59.372 55.000 0.00 0.00 0.00 2.32
737 751 1.931007 GCCTCTCCTGCCTTCCCATT 61.931 60.000 0.00 0.00 0.00 3.16
739 753 3.011517 GCCTCTCCTGCCTTCCCA 61.012 66.667 0.00 0.00 0.00 4.37
740 754 3.803162 GGCCTCTCCTGCCTTCCC 61.803 72.222 0.00 0.00 45.70 3.97
765 787 4.122515 GTTGAGTCGCGCGCACTC 62.123 66.667 35.60 35.60 40.75 3.51
770 792 2.277692 TATCCGTTGAGTCGCGCG 60.278 61.111 26.76 26.76 0.00 6.86
789 814 4.139786 GTGTCAGCATGTATTCCATCCAT 58.860 43.478 0.00 0.00 37.40 3.41
790 815 3.544684 GTGTCAGCATGTATTCCATCCA 58.455 45.455 0.00 0.00 37.40 3.41
791 816 2.545526 CGTGTCAGCATGTATTCCATCC 59.454 50.000 0.00 0.00 37.40 3.51
792 817 2.545526 CCGTGTCAGCATGTATTCCATC 59.454 50.000 0.00 0.00 37.40 3.51
793 818 2.564771 CCGTGTCAGCATGTATTCCAT 58.435 47.619 0.00 0.00 37.40 3.41
794 819 1.406751 CCCGTGTCAGCATGTATTCCA 60.407 52.381 0.00 0.00 37.40 3.53
795 820 1.299541 CCCGTGTCAGCATGTATTCC 58.700 55.000 0.00 0.00 37.40 3.01
796 821 0.657840 GCCCGTGTCAGCATGTATTC 59.342 55.000 0.00 0.00 37.40 1.75
797 822 0.748005 GGCCCGTGTCAGCATGTATT 60.748 55.000 0.00 0.00 37.40 1.89
881 906 0.318784 CGAATCGAATCGGGGGAGAC 60.319 60.000 15.07 0.00 39.12 3.36
885 910 1.300697 GGTCGAATCGAATCGGGGG 60.301 63.158 21.78 0.00 42.92 5.40
890 915 1.917273 TCCAACGGTCGAATCGAATC 58.083 50.000 7.01 1.89 37.72 2.52
978 1007 2.235016 CGCAACGGTCGTCAAGTGT 61.235 57.895 0.00 0.00 0.00 3.55
1007 1036 5.072040 AGGAGTTTTTGTGGTGTTTGAAG 57.928 39.130 0.00 0.00 0.00 3.02
1009 1038 3.445805 GGAGGAGTTTTTGTGGTGTTTGA 59.554 43.478 0.00 0.00 0.00 2.69
1024 1053 0.980231 GAGTGGCTGGATGGAGGAGT 60.980 60.000 0.00 0.00 0.00 3.85
1031 1060 1.890979 GGCGATGAGTGGCTGGATG 60.891 63.158 0.00 0.00 0.00 3.51
1041 1070 0.389391 AGAATACGGTGGGCGATGAG 59.611 55.000 0.00 0.00 0.00 2.90
1047 1076 1.112113 TGAGAGAGAATACGGTGGGC 58.888 55.000 0.00 0.00 0.00 5.36
1048 1077 1.409427 GGTGAGAGAGAATACGGTGGG 59.591 57.143 0.00 0.00 0.00 4.61
1050 1079 2.100197 TGGGTGAGAGAGAATACGGTG 58.900 52.381 0.00 0.00 0.00 4.94
1051 1080 2.100989 GTGGGTGAGAGAGAATACGGT 58.899 52.381 0.00 0.00 0.00 4.83
1055 1084 1.776662 CCGGTGGGTGAGAGAGAATA 58.223 55.000 0.00 0.00 0.00 1.75
1072 1101 2.285827 TTGGCTTTGTTTGTTGACCG 57.714 45.000 0.00 0.00 0.00 4.79
1077 1106 3.103742 TCCTCCTTTGGCTTTGTTTGTT 58.896 40.909 0.00 0.00 0.00 2.83
1078 1107 2.745968 TCCTCCTTTGGCTTTGTTTGT 58.254 42.857 0.00 0.00 0.00 2.83
1079 1108 3.817709 TTCCTCCTTTGGCTTTGTTTG 57.182 42.857 0.00 0.00 0.00 2.93
1080 1109 4.030216 TCTTTCCTCCTTTGGCTTTGTTT 58.970 39.130 0.00 0.00 0.00 2.83
1110 1139 1.487142 CACTCCTCGGTCCTCTCTCTA 59.513 57.143 0.00 0.00 0.00 2.43
1377 1418 3.918220 GATGCGCGCTTCCACTCG 61.918 66.667 33.29 0.00 0.00 4.18
1516 1557 1.598701 GGCTTCTTGGCAGGCGAATT 61.599 55.000 0.00 0.00 41.37 2.17
1573 1614 3.770040 CGACGACAGGGCCATGGA 61.770 66.667 23.35 0.00 0.00 3.41
1719 1760 3.616560 GCTTGGAGTTGTCGATGGAGTTA 60.617 47.826 0.00 0.00 0.00 2.24
1935 1976 3.570212 ACCTTCGGCTGCTTGGGT 61.570 61.111 0.00 0.57 0.00 4.51
1962 2003 4.776322 TTGCCCTCCGCCACGATG 62.776 66.667 0.00 0.00 36.24 3.84
2220 2261 1.395826 CCTCCATCCTCGTCACCTCC 61.396 65.000 0.00 0.00 0.00 4.30
2442 2483 4.764823 TGTAACACTGAACAATCCAATCCC 59.235 41.667 0.00 0.00 0.00 3.85
2456 2509 4.685628 GCAAATCAACCCAATGTAACACTG 59.314 41.667 0.00 0.00 0.00 3.66
2457 2510 4.588528 AGCAAATCAACCCAATGTAACACT 59.411 37.500 0.00 0.00 0.00 3.55
2516 2569 1.730501 TCGCAAAATCAGAGCCTCTG 58.269 50.000 15.79 15.79 45.59 3.35
2517 2570 2.286872 CATCGCAAAATCAGAGCCTCT 58.713 47.619 0.00 0.00 0.00 3.69
2518 2571 2.012673 ACATCGCAAAATCAGAGCCTC 58.987 47.619 0.00 0.00 0.00 4.70
2519 2572 2.119801 ACATCGCAAAATCAGAGCCT 57.880 45.000 0.00 0.00 0.00 4.58
2560 2613 9.362539 CATTACAGGTGTTTAATTAGTACTCGT 57.637 33.333 0.00 0.00 0.00 4.18
2561 2614 8.325997 GCATTACAGGTGTTTAATTAGTACTCG 58.674 37.037 0.00 0.00 0.00 4.18
2562 2615 8.325997 CGCATTACAGGTGTTTAATTAGTACTC 58.674 37.037 0.00 0.00 0.00 2.59
2563 2616 7.820872 ACGCATTACAGGTGTTTAATTAGTACT 59.179 33.333 0.00 0.00 0.00 2.73
2564 2617 7.967178 ACGCATTACAGGTGTTTAATTAGTAC 58.033 34.615 0.00 0.00 0.00 2.73
2565 2618 9.086336 GTACGCATTACAGGTGTTTAATTAGTA 57.914 33.333 0.00 0.00 0.00 1.82
2566 2619 7.064966 GGTACGCATTACAGGTGTTTAATTAGT 59.935 37.037 0.00 0.00 31.46 2.24
2604 2657 9.697250 TGAAACGCAATTTAATTAGATACGAAG 57.303 29.630 14.45 1.62 0.00 3.79
2625 2683 6.481984 CAGCTTCGATAGGAAAGAATGAAAC 58.518 40.000 0.00 0.00 33.34 2.78
2642 2700 0.801251 CCCTTCTGAAAGCAGCTTCG 59.199 55.000 8.48 0.33 42.01 3.79
2693 2751 8.557029 AGACGTTATTTGGTTGTCTTTTCTTAG 58.443 33.333 0.00 0.00 36.56 2.18
2706 2765 7.707035 GTGATCAGATCTAAGACGTTATTTGGT 59.293 37.037 11.83 0.00 0.00 3.67
2736 2795 1.895707 CCTCGCATTGGAGATGCCC 60.896 63.158 5.51 0.00 41.71 5.36
2737 2796 2.550101 GCCTCGCATTGGAGATGCC 61.550 63.158 5.51 0.00 41.71 4.40
2738 2797 2.890109 CGCCTCGCATTGGAGATGC 61.890 63.158 1.04 1.04 41.35 3.91
2739 2798 3.327148 CGCCTCGCATTGGAGATG 58.673 61.111 4.34 0.00 36.08 2.90
2764 2823 0.767375 GATTAGGATGCTGGAGCCCA 59.233 55.000 0.00 0.00 41.18 5.36
2765 2824 0.037447 GGATTAGGATGCTGGAGCCC 59.963 60.000 0.00 0.00 41.18 5.19
2766 2825 1.063183 AGGATTAGGATGCTGGAGCC 58.937 55.000 0.00 0.00 41.18 4.70
2767 2826 2.181954 CAGGATTAGGATGCTGGAGC 57.818 55.000 0.00 0.00 45.07 4.70
2771 2830 5.704515 CTAATCAACCAGGATTAGGATGCTG 59.295 44.000 12.79 1.47 46.73 4.41
2772 2831 4.803329 AATCAACCAGGATTAGGATGCT 57.197 40.909 0.00 0.00 35.79 3.79
2779 2838 4.196193 CAACCGCTAATCAACCAGGATTA 58.804 43.478 0.00 0.00 38.41 1.75
2780 2839 3.016736 CAACCGCTAATCAACCAGGATT 58.983 45.455 0.00 0.00 40.45 3.01
2781 2840 2.643551 CAACCGCTAATCAACCAGGAT 58.356 47.619 0.00 0.00 0.00 3.24
2782 2841 1.948611 GCAACCGCTAATCAACCAGGA 60.949 52.381 0.00 0.00 34.30 3.86
2783 2842 0.451783 GCAACCGCTAATCAACCAGG 59.548 55.000 0.00 0.00 34.30 4.45
2784 2843 0.451783 GGCAACCGCTAATCAACCAG 59.548 55.000 0.00 0.00 38.60 4.00
2785 2844 1.302383 CGGCAACCGCTAATCAACCA 61.302 55.000 0.00 0.00 41.17 3.67
2786 2845 1.427819 CGGCAACCGCTAATCAACC 59.572 57.895 0.00 0.00 41.17 3.77
2797 2856 0.169451 CCGGATTTAACACGGCAACC 59.831 55.000 0.00 0.00 41.23 3.77
2798 2857 0.169451 CCCGGATTTAACACGGCAAC 59.831 55.000 0.73 0.00 45.93 4.17
2799 2858 1.587933 GCCCGGATTTAACACGGCAA 61.588 55.000 0.73 0.00 45.93 4.52
2800 2859 2.041686 GCCCGGATTTAACACGGCA 61.042 57.895 0.73 0.00 45.93 5.69
2801 2860 2.795973 GCCCGGATTTAACACGGC 59.204 61.111 0.73 0.00 45.93 5.68
2802 2861 1.698714 GACGCCCGGATTTAACACGG 61.699 60.000 0.73 0.00 46.79 4.94
2803 2862 1.015085 TGACGCCCGGATTTAACACG 61.015 55.000 0.73 0.00 0.00 4.49
2804 2863 0.445043 GTGACGCCCGGATTTAACAC 59.555 55.000 0.73 1.71 0.00 3.32
2805 2864 0.674269 GGTGACGCCCGGATTTAACA 60.674 55.000 0.73 0.00 0.00 2.41
2806 2865 2.092374 GGTGACGCCCGGATTTAAC 58.908 57.895 0.73 0.00 0.00 2.01
2807 2866 4.621832 GGTGACGCCCGGATTTAA 57.378 55.556 0.73 0.00 0.00 1.52
2816 2875 2.109181 GATGGCTAGGGTGACGCC 59.891 66.667 0.00 0.00 44.02 5.68
2817 2876 2.279517 CGATGGCTAGGGTGACGC 60.280 66.667 0.00 0.00 0.00 5.19
2818 2877 2.417516 CCGATGGCTAGGGTGACG 59.582 66.667 0.00 0.00 0.00 4.35
2819 2878 2.109181 GCCGATGGCTAGGGTGAC 59.891 66.667 0.00 0.00 46.69 3.67
2828 2887 3.355203 ATGGTTTTGCGCCGATGGC 62.355 57.895 4.18 0.00 46.75 4.40
2829 2888 1.516821 CATGGTTTTGCGCCGATGG 60.517 57.895 4.18 0.00 0.00 3.51
2830 2889 2.160221 GCATGGTTTTGCGCCGATG 61.160 57.895 4.18 3.29 32.06 3.84
2831 2890 2.181525 GCATGGTTTTGCGCCGAT 59.818 55.556 4.18 0.00 32.06 4.18
2832 2891 3.290608 TGCATGGTTTTGCGCCGA 61.291 55.556 4.18 0.00 45.77 5.54
2833 2892 3.105157 GTGCATGGTTTTGCGCCG 61.105 61.111 4.18 0.00 45.21 6.46
2836 2895 2.015627 CGTGGTGCATGGTTTTGCG 61.016 57.895 0.00 0.00 45.77 4.85
2837 2896 2.309501 GCGTGGTGCATGGTTTTGC 61.310 57.895 0.00 0.00 45.45 3.68
2838 2897 2.015627 CGCGTGGTGCATGGTTTTG 61.016 57.895 0.00 0.00 46.97 2.44
2839 2898 2.334653 CGCGTGGTGCATGGTTTT 59.665 55.556 0.00 0.00 46.97 2.43
2840 2899 4.341502 GCGCGTGGTGCATGGTTT 62.342 61.111 8.43 0.00 46.97 3.27
2843 2902 4.764336 CAAGCGCGTGGTGCATGG 62.764 66.667 16.02 0.00 46.97 3.66
2844 2903 4.764336 CCAAGCGCGTGGTGCATG 62.764 66.667 31.07 7.38 46.97 4.06
2851 2910 2.786564 GAAAAGAGGCCAAGCGCGTG 62.787 60.000 16.87 16.87 38.94 5.34
2852 2911 2.594592 AAAAGAGGCCAAGCGCGT 60.595 55.556 8.43 0.00 38.94 6.01
2853 2912 1.856265 AAGAAAAGAGGCCAAGCGCG 61.856 55.000 5.01 0.00 38.94 6.86
2854 2913 0.109551 GAAGAAAAGAGGCCAAGCGC 60.110 55.000 5.01 0.00 0.00 5.92
2855 2914 0.523519 GGAAGAAAAGAGGCCAAGCG 59.476 55.000 5.01 0.00 0.00 4.68
2856 2915 1.543358 CAGGAAGAAAAGAGGCCAAGC 59.457 52.381 5.01 0.00 0.00 4.01
2857 2916 1.543358 GCAGGAAGAAAAGAGGCCAAG 59.457 52.381 5.01 0.00 0.00 3.61
2858 2917 1.133513 TGCAGGAAGAAAAGAGGCCAA 60.134 47.619 5.01 0.00 0.00 4.52
2859 2918 0.478072 TGCAGGAAGAAAAGAGGCCA 59.522 50.000 5.01 0.00 0.00 5.36
2860 2919 0.884514 GTGCAGGAAGAAAAGAGGCC 59.115 55.000 0.00 0.00 0.00 5.19
2861 2920 1.902938 AGTGCAGGAAGAAAAGAGGC 58.097 50.000 0.00 0.00 0.00 4.70
2862 2921 4.453819 CACTTAGTGCAGGAAGAAAAGAGG 59.546 45.833 13.22 0.00 0.00 3.69
2863 2922 5.604010 CACTTAGTGCAGGAAGAAAAGAG 57.396 43.478 13.22 0.00 0.00 2.85
2877 2936 3.181497 ACAAACAGCACAAGCACTTAGTG 60.181 43.478 8.18 8.18 45.49 2.74
2878 2937 3.016736 ACAAACAGCACAAGCACTTAGT 58.983 40.909 0.00 0.00 45.49 2.24
2879 2938 3.698029 ACAAACAGCACAAGCACTTAG 57.302 42.857 0.00 0.00 45.49 2.18
2880 2939 3.441922 TCAACAAACAGCACAAGCACTTA 59.558 39.130 0.00 0.00 45.49 2.24
2881 2940 2.230992 TCAACAAACAGCACAAGCACTT 59.769 40.909 0.00 0.00 45.49 3.16
2882 2941 1.818060 TCAACAAACAGCACAAGCACT 59.182 42.857 0.00 0.00 45.49 4.40
2883 2942 2.276472 TCAACAAACAGCACAAGCAC 57.724 45.000 0.00 0.00 45.49 4.40
2884 2943 3.523606 AATCAACAAACAGCACAAGCA 57.476 38.095 0.00 0.00 45.49 3.91
2885 2944 3.426525 GCTAATCAACAAACAGCACAAGC 59.573 43.478 0.00 0.00 42.56 4.01
2886 2945 3.665409 CGCTAATCAACAAACAGCACAAG 59.335 43.478 0.00 0.00 32.46 3.16
2887 2946 3.066064 ACGCTAATCAACAAACAGCACAA 59.934 39.130 0.00 0.00 32.46 3.33
2888 2947 2.616376 ACGCTAATCAACAAACAGCACA 59.384 40.909 0.00 0.00 32.46 4.57
2889 2948 3.058914 AGACGCTAATCAACAAACAGCAC 60.059 43.478 0.00 0.00 32.46 4.40
2890 2949 3.138304 AGACGCTAATCAACAAACAGCA 58.862 40.909 0.00 0.00 32.46 4.41
2891 2950 3.813529 AGACGCTAATCAACAAACAGC 57.186 42.857 0.00 0.00 0.00 4.40
2892 2951 4.666655 CGGAAGACGCTAATCAACAAACAG 60.667 45.833 0.00 0.00 34.82 3.16
2893 2952 3.185594 CGGAAGACGCTAATCAACAAACA 59.814 43.478 0.00 0.00 34.82 2.83
2894 2953 3.732943 CGGAAGACGCTAATCAACAAAC 58.267 45.455 0.00 0.00 34.82 2.93
2908 2967 2.476997 GTCTCAGCTTTCAACGGAAGAC 59.523 50.000 0.00 0.00 33.82 3.01
2909 2968 2.755650 GTCTCAGCTTTCAACGGAAGA 58.244 47.619 0.00 0.00 33.82 2.87
2910 2969 1.457303 CGTCTCAGCTTTCAACGGAAG 59.543 52.381 0.00 0.00 33.82 3.46
2911 2970 1.497991 CGTCTCAGCTTTCAACGGAA 58.502 50.000 0.00 0.00 0.00 4.30
2912 2971 0.944311 GCGTCTCAGCTTTCAACGGA 60.944 55.000 9.04 0.00 34.11 4.69
2913 2972 0.946221 AGCGTCTCAGCTTTCAACGG 60.946 55.000 9.04 0.00 46.80 4.44
2914 2973 2.522060 AGCGTCTCAGCTTTCAACG 58.478 52.632 3.93 3.93 46.80 4.10
2922 2981 0.390472 AAGCACCTAAGCGTCTCAGC 60.390 55.000 0.00 0.00 40.15 4.26
2923 2982 2.086054 AAAGCACCTAAGCGTCTCAG 57.914 50.000 0.00 0.00 40.15 3.35
2924 2983 2.543777 AAAAGCACCTAAGCGTCTCA 57.456 45.000 0.00 0.00 40.15 3.27
2925 2984 5.547181 AAATAAAAGCACCTAAGCGTCTC 57.453 39.130 0.00 0.00 40.15 3.36
2926 2985 5.705905 AGAAAATAAAAGCACCTAAGCGTCT 59.294 36.000 0.00 0.00 40.15 4.18
2927 2986 5.939457 AGAAAATAAAAGCACCTAAGCGTC 58.061 37.500 0.00 0.00 40.15 5.19
2928 2987 5.959618 AGAAAATAAAAGCACCTAAGCGT 57.040 34.783 0.00 0.00 40.15 5.07
2929 2988 7.637709 AAAAGAAAATAAAAGCACCTAAGCG 57.362 32.000 0.00 0.00 40.15 4.68
2963 3022 6.877322 ACTTAGATAGGCGCTTACAAGAAAAA 59.123 34.615 18.32 2.03 0.00 1.94
2964 3023 6.312918 CACTTAGATAGGCGCTTACAAGAAAA 59.687 38.462 18.32 2.85 0.00 2.29
2965 3024 5.810587 CACTTAGATAGGCGCTTACAAGAAA 59.189 40.000 18.32 3.94 0.00 2.52
2966 3025 5.348986 CACTTAGATAGGCGCTTACAAGAA 58.651 41.667 18.32 5.14 0.00 2.52
2967 3026 4.202121 CCACTTAGATAGGCGCTTACAAGA 60.202 45.833 18.32 0.00 0.00 3.02
2968 3027 4.051922 CCACTTAGATAGGCGCTTACAAG 58.948 47.826 7.64 11.12 0.00 3.16
2969 3028 3.740141 GCCACTTAGATAGGCGCTTACAA 60.740 47.826 7.64 0.00 38.86 2.41
2970 3029 2.223971 GCCACTTAGATAGGCGCTTACA 60.224 50.000 7.64 0.00 38.86 2.41
2971 3030 2.405172 GCCACTTAGATAGGCGCTTAC 58.595 52.381 7.64 0.00 38.86 2.34
2972 3031 2.814280 GCCACTTAGATAGGCGCTTA 57.186 50.000 7.64 3.82 38.86 3.09
2973 3032 3.688553 GCCACTTAGATAGGCGCTT 57.311 52.632 7.64 0.52 38.86 4.68
2978 3037 3.829601 CCAGAGGTAGCCACTTAGATAGG 59.170 52.174 0.00 0.00 0.00 2.57
2979 3038 3.829601 CCCAGAGGTAGCCACTTAGATAG 59.170 52.174 0.00 0.00 0.00 2.08
2980 3039 3.845860 CCCAGAGGTAGCCACTTAGATA 58.154 50.000 0.00 0.00 0.00 1.98
2981 3040 2.683768 CCCAGAGGTAGCCACTTAGAT 58.316 52.381 0.00 0.00 0.00 1.98
2982 3041 2.160721 CCCAGAGGTAGCCACTTAGA 57.839 55.000 0.00 0.00 0.00 2.10
2994 3053 2.437085 GGGACCAATAAACCCAGAGG 57.563 55.000 0.00 0.00 42.81 3.69
3009 3068 1.404035 GGCACGAAATACAATGGGGAC 59.596 52.381 0.00 0.00 0.00 4.46
3010 3069 1.004862 TGGCACGAAATACAATGGGGA 59.995 47.619 0.00 0.00 0.00 4.81
3011 3070 1.468985 TGGCACGAAATACAATGGGG 58.531 50.000 0.00 0.00 0.00 4.96
3012 3071 3.584406 TTTGGCACGAAATACAATGGG 57.416 42.857 0.00 0.00 0.00 4.00
3013 3072 6.479095 AAAATTTGGCACGAAATACAATGG 57.521 33.333 0.00 0.00 0.00 3.16
3014 3073 7.954786 GGTTAAAATTTGGCACGAAATACAATG 59.045 33.333 0.00 0.00 0.00 2.82
3015 3074 7.657761 TGGTTAAAATTTGGCACGAAATACAAT 59.342 29.630 0.00 0.00 0.00 2.71
3016 3075 6.984474 TGGTTAAAATTTGGCACGAAATACAA 59.016 30.769 0.00 0.00 0.00 2.41
3017 3076 6.513180 TGGTTAAAATTTGGCACGAAATACA 58.487 32.000 0.00 0.00 0.00 2.29
3018 3077 7.412455 CCATGGTTAAAATTTGGCACGAAATAC 60.412 37.037 2.57 0.00 0.00 1.89
3019 3078 6.591834 CCATGGTTAAAATTTGGCACGAAATA 59.408 34.615 2.57 0.00 0.00 1.40
3020 3079 5.411053 CCATGGTTAAAATTTGGCACGAAAT 59.589 36.000 2.57 0.00 0.00 2.17
3021 3080 4.752101 CCATGGTTAAAATTTGGCACGAAA 59.248 37.500 2.57 0.00 0.00 3.46
3022 3081 4.039245 TCCATGGTTAAAATTTGGCACGAA 59.961 37.500 12.58 0.00 0.00 3.85
3023 3082 3.574396 TCCATGGTTAAAATTTGGCACGA 59.426 39.130 12.58 0.00 0.00 4.35
3024 3083 3.919216 TCCATGGTTAAAATTTGGCACG 58.081 40.909 12.58 0.00 0.00 5.34
3025 3084 7.913674 TTAATCCATGGTTAAAATTTGGCAC 57.086 32.000 12.58 0.00 0.00 5.01
3026 3085 8.160106 AGTTTAATCCATGGTTAAAATTTGGCA 58.840 29.630 22.72 6.64 34.05 4.92
3027 3086 8.560355 AGTTTAATCCATGGTTAAAATTTGGC 57.440 30.769 22.72 14.57 34.05 4.52
3038 3097 9.705290 GAACATTTTGTTAGTTTAATCCATGGT 57.295 29.630 12.58 0.00 41.28 3.55
3039 3098 9.703892 TGAACATTTTGTTAGTTTAATCCATGG 57.296 29.630 4.97 4.97 41.28 3.66
3041 3100 9.405587 CGTGAACATTTTGTTAGTTTAATCCAT 57.594 29.630 0.00 0.00 41.28 3.41
3042 3101 7.380065 GCGTGAACATTTTGTTAGTTTAATCCA 59.620 33.333 0.00 0.00 41.28 3.41
3043 3102 7.380065 TGCGTGAACATTTTGTTAGTTTAATCC 59.620 33.333 0.00 0.00 41.28 3.01
3044 3103 8.276060 TGCGTGAACATTTTGTTAGTTTAATC 57.724 30.769 0.00 0.00 41.28 1.75
3045 3104 8.698854 CATGCGTGAACATTTTGTTAGTTTAAT 58.301 29.630 0.00 0.00 41.28 1.40
3046 3105 7.702772 ACATGCGTGAACATTTTGTTAGTTTAA 59.297 29.630 14.17 0.00 41.28 1.52
3047 3106 7.197017 ACATGCGTGAACATTTTGTTAGTTTA 58.803 30.769 14.17 0.00 41.28 2.01
3048 3107 6.039616 ACATGCGTGAACATTTTGTTAGTTT 58.960 32.000 14.17 0.00 41.28 2.66
3049 3108 5.587289 ACATGCGTGAACATTTTGTTAGTT 58.413 33.333 14.17 0.00 41.28 2.24
3050 3109 5.181690 ACATGCGTGAACATTTTGTTAGT 57.818 34.783 14.17 0.00 41.28 2.24
3051 3110 5.115472 GTGACATGCGTGAACATTTTGTTAG 59.885 40.000 14.17 0.00 41.28 2.34
3052 3111 4.973051 GTGACATGCGTGAACATTTTGTTA 59.027 37.500 14.17 0.00 41.28 2.41
3053 3112 3.796178 GTGACATGCGTGAACATTTTGTT 59.204 39.130 14.17 0.00 44.37 2.83
3054 3113 3.371168 GTGACATGCGTGAACATTTTGT 58.629 40.909 14.17 0.00 0.00 2.83
3055 3114 2.725723 GGTGACATGCGTGAACATTTTG 59.274 45.455 14.17 0.00 0.00 2.44
3056 3115 2.604373 CGGTGACATGCGTGAACATTTT 60.604 45.455 14.17 0.00 0.00 1.82
3057 3116 1.069296 CGGTGACATGCGTGAACATTT 60.069 47.619 14.17 0.00 0.00 2.32
3058 3117 0.516877 CGGTGACATGCGTGAACATT 59.483 50.000 14.17 0.00 0.00 2.71
3059 3118 0.320334 TCGGTGACATGCGTGAACAT 60.320 50.000 14.17 0.00 0.00 2.71
3060 3119 0.530870 TTCGGTGACATGCGTGAACA 60.531 50.000 14.17 9.53 0.00 3.18
3061 3120 0.110823 GTTCGGTGACATGCGTGAAC 60.111 55.000 14.17 10.22 0.00 3.18
3062 3121 0.530870 TGTTCGGTGACATGCGTGAA 60.531 50.000 14.17 0.00 0.00 3.18
3063 3122 0.320334 ATGTTCGGTGACATGCGTGA 60.320 50.000 14.17 0.00 38.75 4.35
3064 3123 0.516877 AATGTTCGGTGACATGCGTG 59.483 50.000 3.82 3.82 40.03 5.34
3065 3124 2.087501 TAATGTTCGGTGACATGCGT 57.912 45.000 0.00 0.00 40.03 5.24
3066 3125 4.990543 ATATAATGTTCGGTGACATGCG 57.009 40.909 0.00 0.00 40.03 4.73
3067 3126 7.700234 TCAAAAATATAATGTTCGGTGACATGC 59.300 33.333 0.00 0.00 40.03 4.06
3068 3127 9.566530 TTCAAAAATATAATGTTCGGTGACATG 57.433 29.630 0.00 0.00 40.03 3.21
3070 3129 9.967346 TTTTCAAAAATATAATGTTCGGTGACA 57.033 25.926 0.00 0.00 0.00 3.58
3090 3149 9.834628 GGATTCGTATTTGAACATAGTTTTCAA 57.165 29.630 0.00 0.00 40.42 2.69
3091 3150 9.004717 TGGATTCGTATTTGAACATAGTTTTCA 57.995 29.630 0.00 0.00 0.00 2.69
3092 3151 9.834628 TTGGATTCGTATTTGAACATAGTTTTC 57.165 29.630 0.00 0.00 0.00 2.29
3094 3153 9.787532 CATTGGATTCGTATTTGAACATAGTTT 57.212 29.630 0.00 0.00 0.00 2.66
3095 3154 9.173021 TCATTGGATTCGTATTTGAACATAGTT 57.827 29.630 0.00 0.00 0.00 2.24
3096 3155 8.731275 TCATTGGATTCGTATTTGAACATAGT 57.269 30.769 0.00 0.00 0.00 2.12
3097 3156 9.045223 TCTCATTGGATTCGTATTTGAACATAG 57.955 33.333 0.00 0.00 0.00 2.23
3098 3157 8.956533 TCTCATTGGATTCGTATTTGAACATA 57.043 30.769 0.00 0.00 0.00 2.29
3099 3158 7.864108 TCTCATTGGATTCGTATTTGAACAT 57.136 32.000 0.00 0.00 0.00 2.71
3100 3159 7.864108 ATCTCATTGGATTCGTATTTGAACA 57.136 32.000 0.00 0.00 0.00 3.18
3109 3168 9.793252 CAAGAAAAATTATCTCATTGGATTCGT 57.207 29.630 0.00 0.00 0.00 3.85
3115 3174 8.814235 GCATGTCAAGAAAAATTATCTCATTGG 58.186 33.333 0.00 0.00 0.00 3.16
3116 3175 9.361315 TGCATGTCAAGAAAAATTATCTCATTG 57.639 29.630 0.00 0.00 0.00 2.82
3127 3186 9.932699 CAAAATGTTAATGCATGTCAAGAAAAA 57.067 25.926 0.00 0.00 0.00 1.94
3128 3187 9.107177 ACAAAATGTTAATGCATGTCAAGAAAA 57.893 25.926 0.00 0.00 0.00 2.29
3129 3188 8.659925 ACAAAATGTTAATGCATGTCAAGAAA 57.340 26.923 0.00 0.00 0.00 2.52
3130 3189 8.659925 AACAAAATGTTAATGCATGTCAAGAA 57.340 26.923 0.00 0.00 39.09 2.52
3131 3190 9.409312 CTAACAAAATGTTAATGCATGTCAAGA 57.591 29.630 0.00 0.00 41.70 3.02
3132 3191 9.195411 ACTAACAAAATGTTAATGCATGTCAAG 57.805 29.630 0.00 0.00 41.70 3.02
3133 3192 9.539825 AACTAACAAAATGTTAATGCATGTCAA 57.460 25.926 0.00 0.00 41.70 3.18
3161 3220 9.949174 GTTTGTGCCAAATTTTGATTAAAGATT 57.051 25.926 10.72 0.00 0.00 2.40
3162 3221 9.341078 AGTTTGTGCCAAATTTTGATTAAAGAT 57.659 25.926 10.72 0.00 0.00 2.40
3163 3222 8.729805 AGTTTGTGCCAAATTTTGATTAAAGA 57.270 26.923 10.72 0.00 0.00 2.52
3164 3223 9.862585 GTAGTTTGTGCCAAATTTTGATTAAAG 57.137 29.630 10.72 0.00 0.00 1.85
3165 3224 9.383519 TGTAGTTTGTGCCAAATTTTGATTAAA 57.616 25.926 10.72 4.32 0.00 1.52
3166 3225 8.948631 TGTAGTTTGTGCCAAATTTTGATTAA 57.051 26.923 10.72 0.00 0.00 1.40
3167 3226 8.948631 TTGTAGTTTGTGCCAAATTTTGATTA 57.051 26.923 10.72 0.00 0.00 1.75
3168 3227 7.856145 TTGTAGTTTGTGCCAAATTTTGATT 57.144 28.000 10.72 0.00 0.00 2.57
3169 3228 7.465245 CGTTTGTAGTTTGTGCCAAATTTTGAT 60.465 33.333 10.72 0.00 0.00 2.57
3170 3229 6.183360 CGTTTGTAGTTTGTGCCAAATTTTGA 60.183 34.615 10.72 0.00 0.00 2.69
3171 3230 5.956645 CGTTTGTAGTTTGTGCCAAATTTTG 59.043 36.000 1.99 1.99 0.00 2.44
3172 3231 5.064071 CCGTTTGTAGTTTGTGCCAAATTTT 59.936 36.000 4.07 0.00 0.00 1.82
3173 3232 4.568760 CCGTTTGTAGTTTGTGCCAAATTT 59.431 37.500 4.07 0.00 0.00 1.82
3174 3233 4.116238 CCGTTTGTAGTTTGTGCCAAATT 58.884 39.130 4.07 3.14 0.00 1.82
3175 3234 3.491792 CCCGTTTGTAGTTTGTGCCAAAT 60.492 43.478 4.07 0.00 0.00 2.32
3176 3235 2.159226 CCCGTTTGTAGTTTGTGCCAAA 60.159 45.455 0.00 0.00 0.00 3.28
3177 3236 1.405821 CCCGTTTGTAGTTTGTGCCAA 59.594 47.619 0.00 0.00 0.00 4.52
3178 3237 1.025812 CCCGTTTGTAGTTTGTGCCA 58.974 50.000 0.00 0.00 0.00 4.92
3179 3238 1.002142 GTCCCGTTTGTAGTTTGTGCC 60.002 52.381 0.00 0.00 0.00 5.01
3180 3239 1.002142 GGTCCCGTTTGTAGTTTGTGC 60.002 52.381 0.00 0.00 0.00 4.57
3181 3240 2.567985 AGGTCCCGTTTGTAGTTTGTG 58.432 47.619 0.00 0.00 0.00 3.33
3182 3241 4.628963 ATAGGTCCCGTTTGTAGTTTGT 57.371 40.909 0.00 0.00 0.00 2.83
3183 3242 6.128200 GGTTTATAGGTCCCGTTTGTAGTTTG 60.128 42.308 0.00 0.00 0.00 2.93
3184 3243 5.939883 GGTTTATAGGTCCCGTTTGTAGTTT 59.060 40.000 0.00 0.00 0.00 2.66
3185 3244 5.012975 TGGTTTATAGGTCCCGTTTGTAGTT 59.987 40.000 0.00 0.00 0.00 2.24
3186 3245 4.531732 TGGTTTATAGGTCCCGTTTGTAGT 59.468 41.667 0.00 0.00 0.00 2.73
3187 3246 5.088680 TGGTTTATAGGTCCCGTTTGTAG 57.911 43.478 0.00 0.00 0.00 2.74
3188 3247 4.080975 CCTGGTTTATAGGTCCCGTTTGTA 60.081 45.833 0.00 0.00 0.00 2.41
3189 3248 3.307904 CCTGGTTTATAGGTCCCGTTTGT 60.308 47.826 0.00 0.00 0.00 2.83
3190 3249 3.054948 TCCTGGTTTATAGGTCCCGTTTG 60.055 47.826 0.00 0.00 36.67 2.93
3191 3250 3.183801 TCCTGGTTTATAGGTCCCGTTT 58.816 45.455 0.00 0.00 36.67 3.60
3192 3251 2.836667 TCCTGGTTTATAGGTCCCGTT 58.163 47.619 0.00 0.00 36.67 4.44
3193 3252 2.555732 TCCTGGTTTATAGGTCCCGT 57.444 50.000 0.00 0.00 36.67 5.28
3194 3253 3.036091 TCTTCCTGGTTTATAGGTCCCG 58.964 50.000 0.00 0.00 36.67 5.14
3195 3254 3.391626 CCTCTTCCTGGTTTATAGGTCCC 59.608 52.174 0.00 0.00 36.67 4.46
3196 3255 4.038633 ACCTCTTCCTGGTTTATAGGTCC 58.961 47.826 0.00 0.00 36.67 4.46
3197 3256 5.898397 ACTACCTCTTCCTGGTTTATAGGTC 59.102 44.000 10.60 0.00 38.88 3.85
3198 3257 5.851418 ACTACCTCTTCCTGGTTTATAGGT 58.149 41.667 11.55 11.55 38.88 3.08
3199 3258 6.015265 GCTACTACCTCTTCCTGGTTTATAGG 60.015 46.154 0.00 0.00 38.88 2.57
3200 3259 6.550108 TGCTACTACCTCTTCCTGGTTTATAG 59.450 42.308 0.00 0.00 38.88 1.31
3201 3260 6.437755 TGCTACTACCTCTTCCTGGTTTATA 58.562 40.000 0.00 0.00 38.88 0.98
3202 3261 5.278061 TGCTACTACCTCTTCCTGGTTTAT 58.722 41.667 0.00 0.00 38.88 1.40
3203 3262 4.680407 TGCTACTACCTCTTCCTGGTTTA 58.320 43.478 0.00 0.00 38.88 2.01
3204 3263 3.517612 TGCTACTACCTCTTCCTGGTTT 58.482 45.455 0.00 0.00 38.88 3.27
3205 3264 3.185880 TGCTACTACCTCTTCCTGGTT 57.814 47.619 0.00 0.00 38.88 3.67
3206 3265 2.921834 TGCTACTACCTCTTCCTGGT 57.078 50.000 0.00 0.00 41.28 4.00
3207 3266 3.034635 ACATGCTACTACCTCTTCCTGG 58.965 50.000 0.00 0.00 0.00 4.45
3208 3267 5.854010 TTACATGCTACTACCTCTTCCTG 57.146 43.478 0.00 0.00 0.00 3.86
3209 3268 6.821388 CATTTACATGCTACTACCTCTTCCT 58.179 40.000 0.00 0.00 0.00 3.36
3224 3283 2.715268 CGCGTTTAGGGCATTTACATG 58.285 47.619 0.00 0.00 0.00 3.21
3244 3303 2.405892 GATGCATACATCCAAACGGC 57.594 50.000 0.00 0.00 45.94 5.68
3266 3325 2.186125 CCGAACGGGCCTTACCTC 59.814 66.667 0.84 0.00 39.10 3.85
3284 3343 1.671379 GTTGGGAGCCGGACTGTTC 60.671 63.158 5.05 0.00 0.00 3.18
3289 3348 4.452733 CGGAGTTGGGAGCCGGAC 62.453 72.222 5.05 0.00 41.29 4.79
3308 3367 0.179936 CTCCCCATCACTTCAGCTCC 59.820 60.000 0.00 0.00 0.00 4.70
3320 3379 3.720601 TGCGCTGCTTCTCCCCAT 61.721 61.111 9.73 0.00 0.00 4.00
3324 3383 1.905922 GAACTGTGCGCTGCTTCTCC 61.906 60.000 9.73 0.00 0.00 3.71
3328 3387 0.670162 AAATGAACTGTGCGCTGCTT 59.330 45.000 9.73 0.00 0.00 3.91
3329 3388 0.670162 AAAATGAACTGTGCGCTGCT 59.330 45.000 9.73 0.00 0.00 4.24
3332 3391 1.202394 TGCAAAAATGAACTGTGCGCT 60.202 42.857 9.73 0.00 38.05 5.92
3335 3394 2.473984 GCTCTGCAAAAATGAACTGTGC 59.526 45.455 0.00 0.00 35.75 4.57
3336 3395 3.488310 GTGCTCTGCAAAAATGAACTGTG 59.512 43.478 0.00 0.00 41.47 3.66
3337 3396 3.491447 GGTGCTCTGCAAAAATGAACTGT 60.491 43.478 0.00 0.00 41.47 3.55
3351 3410 2.675056 GCTCAACGCTGGTGCTCTG 61.675 63.158 0.00 0.00 36.97 3.35
3352 3411 2.358003 GCTCAACGCTGGTGCTCT 60.358 61.111 0.00 0.00 36.97 4.09
3374 3455 1.998315 CAGATCACTTCTGCAACTCCG 59.002 52.381 0.00 0.00 45.16 4.63
3383 3464 7.172875 GCATATATTCTGCAACAGATCACTTCT 59.827 37.037 0.00 0.00 40.39 2.85
3385 3466 6.206243 GGCATATATTCTGCAACAGATCACTT 59.794 38.462 10.91 0.00 40.39 3.16
3390 3471 4.005650 CGGGCATATATTCTGCAACAGAT 58.994 43.478 10.91 0.00 40.39 2.90
3393 3474 3.207265 ACGGGCATATATTCTGCAACA 57.793 42.857 10.91 0.00 41.47 3.33
3394 3475 4.389077 GTCTACGGGCATATATTCTGCAAC 59.611 45.833 10.91 4.06 41.47 4.17
3399 3480 5.084519 TGGAAGTCTACGGGCATATATTCT 58.915 41.667 0.00 0.00 0.00 2.40
3403 3484 6.495872 AGTTTATGGAAGTCTACGGGCATATA 59.504 38.462 0.00 0.00 0.00 0.86
3405 3486 4.652421 AGTTTATGGAAGTCTACGGGCATA 59.348 41.667 0.00 0.00 0.00 3.14
3406 3487 3.454812 AGTTTATGGAAGTCTACGGGCAT 59.545 43.478 0.00 0.00 0.00 4.40
3407 3488 2.835764 AGTTTATGGAAGTCTACGGGCA 59.164 45.455 0.00 0.00 0.00 5.36
3408 3489 3.538634 AGTTTATGGAAGTCTACGGGC 57.461 47.619 0.00 0.00 0.00 6.13
3410 3491 5.105473 TCCTCAAGTTTATGGAAGTCTACGG 60.105 44.000 0.00 0.00 0.00 4.02
3411 3492 5.962433 TCCTCAAGTTTATGGAAGTCTACG 58.038 41.667 0.00 0.00 0.00 3.51
3412 3493 8.041323 TCATTCCTCAAGTTTATGGAAGTCTAC 58.959 37.037 0.00 0.00 41.20 2.59
3413 3494 8.146053 TCATTCCTCAAGTTTATGGAAGTCTA 57.854 34.615 0.00 0.00 41.20 2.59
3414 3495 7.020827 TCATTCCTCAAGTTTATGGAAGTCT 57.979 36.000 0.00 0.00 41.20 3.24
3415 3496 7.148171 CCTTCATTCCTCAAGTTTATGGAAGTC 60.148 40.741 0.00 0.00 41.20 3.01
3416 3497 6.660949 CCTTCATTCCTCAAGTTTATGGAAGT 59.339 38.462 0.00 0.00 41.20 3.01
3510 3598 0.686224 GATGATCTGAGAGGGCTGGG 59.314 60.000 0.00 0.00 0.00 4.45
3516 3604 8.775527 CAGTAAAAATGATGATGATCTGAGAGG 58.224 37.037 0.00 0.00 0.00 3.69
3553 3641 5.366460 CAATGCTCAGAGATGACCATAAGT 58.634 41.667 0.00 0.00 0.00 2.24
3585 3673 3.309296 TCAGGGGAGTAGCAGGATTAAG 58.691 50.000 0.00 0.00 0.00 1.85
3607 3695 7.331687 CGGATTAACAGCAAATCAAGGATTTTT 59.668 33.333 1.63 0.00 39.82 1.94


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.