Multiple sequence alignment - TraesCS2B01G311200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G311200 chr2B 100.000 6832 0 0 1 6832 445173536 445180367 0.000000e+00 12617.0
1 TraesCS2B01G311200 chr2B 98.008 954 19 0 5879 6832 445186228 445187181 0.000000e+00 1657.0
2 TraesCS2B01G311200 chr2B 97.275 954 26 0 5879 6832 254088451 254087498 0.000000e+00 1618.0
3 TraesCS2B01G311200 chr2B 97.170 954 27 0 5879 6832 254080554 254079601 0.000000e+00 1613.0
4 TraesCS2B01G311200 chr2B 97.170 954 27 0 5879 6832 741125581 741126534 0.000000e+00 1613.0
5 TraesCS2B01G311200 chr2A 91.438 2698 138 48 1892 4522 507387881 507390552 0.000000e+00 3616.0
6 TraesCS2B01G311200 chr2A 80.742 1428 95 70 334 1634 507386177 507387551 0.000000e+00 948.0
7 TraesCS2B01G311200 chr2A 91.117 349 24 4 1 342 507377428 507377776 3.730000e-127 466.0
8 TraesCS2B01G311200 chr2A 89.583 288 19 7 4505 4788 507390563 507390843 8.430000e-94 355.0
9 TraesCS2B01G311200 chr2D 94.364 1934 71 14 2648 4552 375031903 375033827 0.000000e+00 2933.0
10 TraesCS2B01G311200 chr2D 89.860 1075 47 22 411 1446 375029628 375030679 0.000000e+00 1325.0
11 TraesCS2B01G311200 chr2D 90.434 899 55 14 1471 2357 375030672 375031551 0.000000e+00 1155.0
12 TraesCS2B01G311200 chr2D 85.524 677 85 11 4510 5183 375033828 375034494 0.000000e+00 695.0
13 TraesCS2B01G311200 chr2D 92.420 343 10 7 1 337 375028081 375028413 6.200000e-130 475.0
14 TraesCS2B01G311200 chr2D 89.474 247 18 5 2361 2604 375031660 375031901 8.610000e-79 305.0
15 TraesCS2B01G311200 chr2D 95.385 65 3 0 329 393 375029511 375029575 3.370000e-18 104.0
16 TraesCS2B01G311200 chr2D 83.099 71 12 0 5651 5721 634638528 634638458 1.590000e-06 65.8
17 TraesCS2B01G311200 chr7B 97.371 951 24 1 5882 6832 133716460 133715511 0.000000e+00 1616.0
18 TraesCS2B01G311200 chr7B 97.164 952 27 0 5881 6832 62437042 62436091 0.000000e+00 1609.0
19 TraesCS2B01G311200 chr7B 97.065 954 28 0 5879 6832 133723316 133722363 0.000000e+00 1607.0
20 TraesCS2B01G311200 chr7B 96.687 966 31 1 5868 6832 104185014 104185979 0.000000e+00 1605.0
21 TraesCS2B01G311200 chr6B 97.065 954 28 0 5879 6832 227177349 227176396 0.000000e+00 1607.0
22 TraesCS2B01G311200 chr6B 84.524 84 11 2 5654 5736 156749945 156749863 1.580000e-11 82.4
23 TraesCS2B01G311200 chr3D 86.647 996 129 3 2920 3911 349642863 349641868 0.000000e+00 1099.0
24 TraesCS2B01G311200 chr3A 86.249 989 133 2 2926 3911 467878393 467877405 0.000000e+00 1070.0
25 TraesCS2B01G311200 chr3A 82.335 334 48 9 4834 5160 136450859 136450530 5.220000e-71 279.0
26 TraesCS2B01G311200 chr3A 79.556 225 38 8 4912 5131 216152406 216152627 3.300000e-33 154.0
27 TraesCS2B01G311200 chr3B 85.541 989 140 2 2926 3911 448577928 448576940 0.000000e+00 1031.0
28 TraesCS2B01G311200 chr5D 75.520 866 188 21 4793 5647 207965323 207966175 2.970000e-108 403.0
29 TraesCS2B01G311200 chr5D 75.230 868 187 24 4793 5647 207994414 207995266 2.990000e-103 387.0
30 TraesCS2B01G311200 chrUn 80.194 515 91 9 4824 5330 101814783 101814272 6.470000e-100 375.0
31 TraesCS2B01G311200 chr1B 79.310 551 98 12 4814 5355 187214150 187214693 8.370000e-99 372.0
32 TraesCS2B01G311200 chr4B 74.790 833 155 34 4834 5647 526937513 526938309 2.380000e-84 324.0
33 TraesCS2B01G311200 chr4B 78.329 383 64 14 4786 5161 373760563 373760193 5.330000e-56 230.0
34 TraesCS2B01G311200 chr5A 77.184 561 111 14 4810 5362 268589092 268589643 1.850000e-80 311.0
35 TraesCS2B01G311200 chr7A 77.206 544 101 12 4792 5330 698595635 698595110 5.180000e-76 296.0
36 TraesCS2B01G311200 chr7D 89.231 65 6 1 5654 5717 522882392 522882456 5.680000e-11 80.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G311200 chr2B 445173536 445180367 6831 False 12617.000000 12617 100.000000 1 6832 1 chr2B.!!$F1 6831
1 TraesCS2B01G311200 chr2B 445186228 445187181 953 False 1657.000000 1657 98.008000 5879 6832 1 chr2B.!!$F2 953
2 TraesCS2B01G311200 chr2B 254087498 254088451 953 True 1618.000000 1618 97.275000 5879 6832 1 chr2B.!!$R2 953
3 TraesCS2B01G311200 chr2B 254079601 254080554 953 True 1613.000000 1613 97.170000 5879 6832 1 chr2B.!!$R1 953
4 TraesCS2B01G311200 chr2B 741125581 741126534 953 False 1613.000000 1613 97.170000 5879 6832 1 chr2B.!!$F3 953
5 TraesCS2B01G311200 chr2A 507386177 507390843 4666 False 1639.666667 3616 87.254333 334 4788 3 chr2A.!!$F2 4454
6 TraesCS2B01G311200 chr2D 375028081 375034494 6413 False 998.857143 2933 91.065857 1 5183 7 chr2D.!!$F1 5182
7 TraesCS2B01G311200 chr7B 133715511 133716460 949 True 1616.000000 1616 97.371000 5882 6832 1 chr7B.!!$R2 950
8 TraesCS2B01G311200 chr7B 62436091 62437042 951 True 1609.000000 1609 97.164000 5881 6832 1 chr7B.!!$R1 951
9 TraesCS2B01G311200 chr7B 133722363 133723316 953 True 1607.000000 1607 97.065000 5879 6832 1 chr7B.!!$R3 953
10 TraesCS2B01G311200 chr7B 104185014 104185979 965 False 1605.000000 1605 96.687000 5868 6832 1 chr7B.!!$F1 964
11 TraesCS2B01G311200 chr6B 227176396 227177349 953 True 1607.000000 1607 97.065000 5879 6832 1 chr6B.!!$R2 953
12 TraesCS2B01G311200 chr3D 349641868 349642863 995 True 1099.000000 1099 86.647000 2920 3911 1 chr3D.!!$R1 991
13 TraesCS2B01G311200 chr3A 467877405 467878393 988 True 1070.000000 1070 86.249000 2926 3911 1 chr3A.!!$R2 985
14 TraesCS2B01G311200 chr3B 448576940 448577928 988 True 1031.000000 1031 85.541000 2926 3911 1 chr3B.!!$R1 985
15 TraesCS2B01G311200 chr5D 207965323 207966175 852 False 403.000000 403 75.520000 4793 5647 1 chr5D.!!$F1 854
16 TraesCS2B01G311200 chr5D 207994414 207995266 852 False 387.000000 387 75.230000 4793 5647 1 chr5D.!!$F2 854
17 TraesCS2B01G311200 chrUn 101814272 101814783 511 True 375.000000 375 80.194000 4824 5330 1 chrUn.!!$R1 506
18 TraesCS2B01G311200 chr1B 187214150 187214693 543 False 372.000000 372 79.310000 4814 5355 1 chr1B.!!$F1 541
19 TraesCS2B01G311200 chr4B 526937513 526938309 796 False 324.000000 324 74.790000 4834 5647 1 chr4B.!!$F1 813
20 TraesCS2B01G311200 chr5A 268589092 268589643 551 False 311.000000 311 77.184000 4810 5362 1 chr5A.!!$F1 552
21 TraesCS2B01G311200 chr7A 698595110 698595635 525 True 296.000000 296 77.206000 4792 5330 1 chr7A.!!$R1 538

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
37 38 0.040425 GAAGCGTGCGTGTCCAAAAT 60.040 50.0 0.00 0.0 0.00 1.82 F
860 2060 0.179073 AATCACGAGAGGGGAATGCG 60.179 55.0 0.00 0.0 33.12 4.73 F
1604 2904 0.040058 TGGTTCACCCGGTAGCTAGA 59.960 55.0 0.00 0.0 35.15 2.43 F
1606 2906 0.102663 GTTCACCCGGTAGCTAGAGC 59.897 60.0 0.00 0.0 42.49 4.09 F
1939 3361 0.323725 TTGGCTGCCTGATTTCCCTC 60.324 55.0 21.03 0.0 0.00 4.30 F
3739 5314 1.112315 CCTGCTGCGGAGGATAGAGT 61.112 60.0 10.70 0.0 31.48 3.24 F
4772 6422 0.107508 AATCAGGCACCATCCGTCTG 60.108 55.0 0.00 0.0 0.00 3.51 F
5211 6881 0.042881 GGGAGGGGAAGAGTAGTGGT 59.957 60.0 0.00 0.0 0.00 4.16 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1604 2904 0.319297 AACCGAAACGAGTTAGCGCT 60.319 50.000 17.26 17.26 33.86 5.92 R
2610 4158 0.747255 AGCTGCATCTACCTACACGG 59.253 55.000 1.02 0.00 39.35 4.94 R
2889 4458 0.935898 CCTCATCTGCTGCGATTGTC 59.064 55.000 4.63 0.00 0.00 3.18 R
2891 4460 1.647629 GCCTCATCTGCTGCGATTG 59.352 57.895 4.63 0.00 0.00 2.67 R
3846 5421 2.783288 GCCGTCGGGGTAGAAGAGG 61.783 68.421 14.38 0.00 38.44 3.69 R
5104 6761 0.179000 CTCTTCCCATCCCGTGAAGG 59.821 60.000 0.00 0.00 36.88 3.46 R
5672 7346 0.324091 ACGTAACCCCCACTCGAGAT 60.324 55.000 21.68 0.00 0.00 2.75 R
6793 8467 1.004862 AGAGACTCCTCGTCATGTCCA 59.995 52.381 0.00 0.00 45.32 4.02 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
37 38 0.040425 GAAGCGTGCGTGTCCAAAAT 60.040 50.000 0.00 0.00 0.00 1.82
86 88 3.675619 ATCGGGTTAGGTGCGGCAC 62.676 63.158 24.43 24.43 0.00 5.01
89 91 2.032071 GGTTAGGTGCGGCACTGT 59.968 61.111 29.92 20.39 34.40 3.55
92 94 4.697756 TAGGTGCGGCACTGTGGC 62.698 66.667 29.92 22.95 39.85 5.01
101 103 2.667418 CACTGTGGCAGGGAGAGG 59.333 66.667 0.00 0.00 36.97 3.69
103 105 4.106925 CTGTGGCAGGGAGAGGGC 62.107 72.222 0.00 0.00 0.00 5.19
109 111 3.393970 CAGGGAGAGGGCGAGCAA 61.394 66.667 0.00 0.00 0.00 3.91
110 112 3.080121 AGGGAGAGGGCGAGCAAG 61.080 66.667 0.00 0.00 0.00 4.01
111 113 4.847444 GGGAGAGGGCGAGCAAGC 62.847 72.222 0.00 0.00 0.00 4.01
239 245 4.322349 CCGAATTAAAGGTGCCAAATGGAA 60.322 41.667 2.98 0.00 37.39 3.53
244 250 4.769345 AAAGGTGCCAAATGGAAGAAAA 57.231 36.364 2.98 0.00 37.39 2.29
300 306 5.810587 AGCGTATCGAATTATTGTTGTCACT 59.189 36.000 0.00 0.00 0.00 3.41
309 315 7.009265 CGAATTATTGTTGTCACTACTCACGAT 59.991 37.037 0.00 0.00 0.00 3.73
319 325 6.321435 TGTCACTACTCACGATTCATAGGATT 59.679 38.462 0.00 0.00 0.00 3.01
331 337 2.693591 TCATAGGATTCAGTCGTGGGTC 59.306 50.000 0.00 0.00 0.00 4.46
385 1497 1.735559 GCCTGGTCCGTCGTGTTAC 60.736 63.158 0.00 0.00 0.00 2.50
407 1548 5.321102 ACCAAGATTACTGTATGTGGCAAA 58.679 37.500 0.00 0.00 0.00 3.68
408 1549 5.951747 ACCAAGATTACTGTATGTGGCAAAT 59.048 36.000 0.00 0.00 0.00 2.32
762 1945 3.554692 GTGATTCGTGCCGCTCGG 61.555 66.667 14.32 3.56 38.57 4.63
772 1959 4.235731 CCGCTCGGGCCTATTTTT 57.764 55.556 0.00 0.00 34.44 1.94
792 1979 4.356405 TTTTGTCTGAGGAAGCATCTCA 57.644 40.909 4.13 4.13 38.75 3.27
793 1980 4.564782 TTTGTCTGAGGAAGCATCTCAT 57.435 40.909 4.54 0.00 40.07 2.90
799 1999 2.208431 GAGGAAGCATCTCATCAACCG 58.792 52.381 0.00 0.00 0.00 4.44
850 2050 0.888619 AGAAGCACGGAATCACGAGA 59.111 50.000 0.00 0.00 37.61 4.04
859 2059 1.587547 GAATCACGAGAGGGGAATGC 58.412 55.000 0.00 0.00 33.12 3.56
860 2060 0.179073 AATCACGAGAGGGGAATGCG 60.179 55.000 0.00 0.00 33.12 4.73
861 2061 2.032860 ATCACGAGAGGGGAATGCGG 62.033 60.000 0.00 0.00 33.12 5.69
862 2062 3.470888 ACGAGAGGGGAATGCGGG 61.471 66.667 0.00 0.00 0.00 6.13
863 2063 3.470888 CGAGAGGGGAATGCGGGT 61.471 66.667 0.00 0.00 0.00 5.28
864 2064 2.131709 CGAGAGGGGAATGCGGGTA 61.132 63.158 0.00 0.00 0.00 3.69
865 2065 1.446366 GAGAGGGGAATGCGGGTAC 59.554 63.158 0.00 0.00 0.00 3.34
1021 2235 2.019951 CACACTCGTTTCCGTCCCG 61.020 63.158 0.00 0.00 35.01 5.14
1037 2266 2.438614 CGACCTCGCTCTCCCTCA 60.439 66.667 0.00 0.00 0.00 3.86
1053 2282 1.434622 CTCATCGCGCTTTCCTGCAT 61.435 55.000 5.56 0.00 0.00 3.96
1097 2326 2.425773 GAAGCACACGCAACGCAG 60.426 61.111 0.00 0.00 42.27 5.18
1098 2327 4.612536 AAGCACACGCAACGCAGC 62.613 61.111 0.00 0.00 42.27 5.25
1139 2368 2.592574 TGTCGTCGGTCGTCACCT 60.593 61.111 0.00 0.00 41.17 4.00
1141 2370 2.281002 TCGTCGGTCGTCACCTCA 60.281 61.111 0.00 0.00 41.17 3.86
1142 2371 2.126965 CGTCGGTCGTCACCTCAC 60.127 66.667 0.00 0.00 41.17 3.51
1144 2373 2.203379 TCGGTCGTCACCTCACCA 60.203 61.111 0.00 0.00 41.17 4.17
1166 2395 0.958876 GCCGCCCCTTAAATATCCCG 60.959 60.000 0.00 0.00 0.00 5.14
1185 2414 3.767044 AAACACCACCCCAAGCCCC 62.767 63.158 0.00 0.00 0.00 5.80
1233 2477 0.539986 ACACTCCGTCCACACAAACT 59.460 50.000 0.00 0.00 0.00 2.66
1259 2519 1.596727 GCATCGAGAGGTCAAGCATTC 59.403 52.381 0.00 0.00 0.00 2.67
1343 2612 2.434359 CCGGAGCCGTCAAGAACC 60.434 66.667 8.25 0.00 37.81 3.62
1383 2652 1.667154 CCTCCTCGTCTTCGCCATCA 61.667 60.000 0.00 0.00 36.96 3.07
1396 2665 1.718757 GCCATCATTCTCACGGCCAC 61.719 60.000 2.24 0.00 36.73 5.01
1397 2666 0.392863 CCATCATTCTCACGGCCACA 60.393 55.000 2.24 0.00 0.00 4.17
1398 2667 1.012086 CATCATTCTCACGGCCACAG 58.988 55.000 2.24 0.00 0.00 3.66
1427 2696 2.551912 CCGCGCAACTTTGGGACTT 61.552 57.895 8.75 0.00 43.04 3.01
1440 2709 1.611977 TGGGACTTATACATCCTCGCG 59.388 52.381 0.00 0.00 35.15 5.87
1441 2710 1.612463 GGGACTTATACATCCTCGCGT 59.388 52.381 5.77 0.00 35.15 6.01
1442 2711 2.816087 GGGACTTATACATCCTCGCGTA 59.184 50.000 5.77 0.00 35.15 4.42
1443 2712 3.442977 GGGACTTATACATCCTCGCGTAT 59.557 47.826 5.77 0.00 35.15 3.06
1444 2713 4.082354 GGGACTTATACATCCTCGCGTATT 60.082 45.833 5.77 0.00 35.15 1.89
1445 2714 5.094134 GGACTTATACATCCTCGCGTATTC 58.906 45.833 5.77 0.00 31.02 1.75
1446 2715 5.335426 GGACTTATACATCCTCGCGTATTCA 60.335 44.000 5.77 0.00 31.02 2.57
1447 2716 5.458891 ACTTATACATCCTCGCGTATTCAC 58.541 41.667 5.77 0.00 31.02 3.18
1456 2725 3.261951 CGTATTCACGCAGCGGGG 61.262 66.667 19.09 10.00 42.05 5.73
1457 2726 2.895372 GTATTCACGCAGCGGGGG 60.895 66.667 19.09 7.15 0.00 5.40
1458 2727 3.078196 TATTCACGCAGCGGGGGA 61.078 61.111 19.09 9.68 0.00 4.81
1459 2728 2.661066 TATTCACGCAGCGGGGGAA 61.661 57.895 19.09 18.07 0.00 3.97
1460 2729 2.862674 TATTCACGCAGCGGGGGAAC 62.863 60.000 19.09 0.00 0.00 3.62
1514 2809 3.680786 GAGGGTTTTGCGGGGCAC 61.681 66.667 0.00 0.00 38.71 5.01
1535 2830 5.406649 CACACAGAGAGTTGGATTAGAGAC 58.593 45.833 0.00 0.00 0.00 3.36
1570 2866 3.581024 TTGCATGATGAAGCTCCAAAC 57.419 42.857 0.00 0.00 0.00 2.93
1600 2900 0.535553 TTTGTGGTTCACCCGGTAGC 60.536 55.000 0.00 0.00 35.15 3.58
1601 2901 1.412453 TTGTGGTTCACCCGGTAGCT 61.412 55.000 0.00 0.00 35.15 3.32
1602 2902 0.542467 TGTGGTTCACCCGGTAGCTA 60.542 55.000 0.00 0.00 35.15 3.32
1603 2903 0.175073 GTGGTTCACCCGGTAGCTAG 59.825 60.000 0.00 0.00 35.15 3.42
1604 2904 0.040058 TGGTTCACCCGGTAGCTAGA 59.960 55.000 0.00 0.00 35.15 2.43
1605 2905 0.745468 GGTTCACCCGGTAGCTAGAG 59.255 60.000 0.00 0.00 0.00 2.43
1606 2906 0.102663 GTTCACCCGGTAGCTAGAGC 59.897 60.000 0.00 0.00 42.49 4.09
1640 2940 3.211564 TTTGGGCTCAAAGCTGCGC 62.212 57.895 7.92 0.00 41.99 6.09
1680 2996 1.798283 TGCTTTGCATGCCATTTGTC 58.202 45.000 16.68 0.00 31.71 3.18
1682 2998 2.561858 TGCTTTGCATGCCATTTGTCTA 59.438 40.909 16.68 0.00 31.71 2.59
1683 2999 3.006644 TGCTTTGCATGCCATTTGTCTAA 59.993 39.130 16.68 0.00 31.71 2.10
1684 3000 3.995705 GCTTTGCATGCCATTTGTCTAAA 59.004 39.130 16.68 4.58 0.00 1.85
1685 3001 4.143052 GCTTTGCATGCCATTTGTCTAAAC 60.143 41.667 16.68 0.00 0.00 2.01
1686 3002 4.597404 TTGCATGCCATTTGTCTAAACA 57.403 36.364 16.68 0.00 0.00 2.83
1687 3003 3.911868 TGCATGCCATTTGTCTAAACAC 58.088 40.909 16.68 0.00 34.35 3.32
1688 3004 3.573538 TGCATGCCATTTGTCTAAACACT 59.426 39.130 16.68 0.00 34.35 3.55
1689 3005 4.168760 GCATGCCATTTGTCTAAACACTC 58.831 43.478 6.36 0.00 34.35 3.51
1690 3006 4.737054 CATGCCATTTGTCTAAACACTCC 58.263 43.478 0.00 0.00 34.35 3.85
1691 3007 3.153919 TGCCATTTGTCTAAACACTCCC 58.846 45.455 0.00 0.00 34.35 4.30
1692 3008 2.492088 GCCATTTGTCTAAACACTCCCC 59.508 50.000 0.00 0.00 34.35 4.81
1693 3009 3.814316 GCCATTTGTCTAAACACTCCCCT 60.814 47.826 0.00 0.00 34.35 4.79
1695 3011 4.218417 CCATTTGTCTAAACACTCCCCTTG 59.782 45.833 0.00 0.00 34.35 3.61
1697 3013 3.764237 TGTCTAAACACTCCCCTTGTC 57.236 47.619 0.00 0.00 0.00 3.18
1698 3014 3.314693 TGTCTAAACACTCCCCTTGTCT 58.685 45.455 0.00 0.00 0.00 3.41
1699 3015 4.485875 TGTCTAAACACTCCCCTTGTCTA 58.514 43.478 0.00 0.00 0.00 2.59
1700 3016 4.903049 TGTCTAAACACTCCCCTTGTCTAA 59.097 41.667 0.00 0.00 0.00 2.10
1701 3017 5.367352 TGTCTAAACACTCCCCTTGTCTAAA 59.633 40.000 0.00 0.00 0.00 1.85
1713 3029 5.414765 CCCCTTGTCTAAACTGATGTTTACC 59.585 44.000 0.00 0.00 43.76 2.85
1725 3041 5.648092 ACTGATGTTTACCTAGTTCCATTGC 59.352 40.000 0.00 0.00 0.00 3.56
1729 3045 6.068461 TGTTTACCTAGTTCCATTGCCATA 57.932 37.500 0.00 0.00 0.00 2.74
1731 3047 6.545666 TGTTTACCTAGTTCCATTGCCATATG 59.454 38.462 0.00 0.00 0.00 1.78
1759 3078 8.676401 CAAACTTACACCACATCATTGATCATA 58.324 33.333 0.00 0.00 0.00 2.15
1764 3083 4.454847 CACCACATCATTGATCATAGAGCC 59.545 45.833 0.00 0.00 0.00 4.70
1796 3115 8.787852 GTCTTTCATTTCTTGTTTCCTCTGTAT 58.212 33.333 0.00 0.00 0.00 2.29
1834 3256 9.798885 GTCTGATATCTGATGCGTTTATTTTAC 57.201 33.333 14.54 0.00 0.00 2.01
1855 3277 8.442605 TTTACTTTAATTCTTTTCGGAATGCG 57.557 30.769 0.00 0.00 36.24 4.73
1868 3290 2.559440 GGAATGCGATCTTTGCTCTCT 58.441 47.619 0.00 0.00 0.00 3.10
1880 3302 6.656632 TCTTTGCTCTCTTTCTTAGTCTCA 57.343 37.500 0.00 0.00 0.00 3.27
1885 3307 7.721286 TGCTCTCTTTCTTAGTCTCAAAAAG 57.279 36.000 0.00 0.00 0.00 2.27
1939 3361 0.323725 TTGGCTGCCTGATTTCCCTC 60.324 55.000 21.03 0.00 0.00 4.30
2020 3446 9.920133 TGCTGAGATTATCTTATCACTTATCAC 57.080 33.333 0.00 0.00 0.00 3.06
2279 3709 2.816087 AGTGGCTTGCTGATTACAGTTG 59.184 45.455 0.00 0.00 45.04 3.16
2303 3734 7.507829 TGTTAGCTAAACCTGGTGTACTTTTA 58.492 34.615 7.99 0.00 37.27 1.52
2330 3761 1.376466 GTGGCCACTGGATGACTGT 59.624 57.895 29.12 0.00 0.00 3.55
2343 3774 8.084073 CACTGGATGACTGTTACAAAATGAAAT 58.916 33.333 0.00 0.00 0.00 2.17
2373 3909 3.435105 AGGTGTTTGACAACGTACGTA 57.565 42.857 23.12 2.29 41.63 3.57
2411 3947 1.607225 TTCTTGGTAGGATGCCCCAT 58.393 50.000 0.00 0.00 41.90 4.00
2438 3974 1.826385 CTCTTTCACATGTGGACCCC 58.174 55.000 25.16 0.00 0.00 4.95
2476 4013 4.092968 CGTGCAATAAACAAGTACTCCCTC 59.907 45.833 0.00 0.00 0.00 4.30
2549 4090 9.628746 TGATGTATTTGTTCATTCATTTCAGTG 57.371 29.630 0.00 0.00 0.00 3.66
2554 4097 7.872163 TTTGTTCATTCATTTCAGTGTATGC 57.128 32.000 0.00 0.00 29.95 3.14
2604 4152 7.499232 CCTCTTATAACAATGAACGGAGGAAAT 59.501 37.037 5.96 0.00 39.87 2.17
2610 4158 6.980051 ACAATGAACGGAGGAAATTACTAC 57.020 37.500 0.00 0.00 0.00 2.73
2616 4164 4.637483 CGGAGGAAATTACTACCGTGTA 57.363 45.455 7.60 0.00 36.38 2.90
2617 4165 4.604976 CGGAGGAAATTACTACCGTGTAG 58.395 47.826 7.60 8.87 36.38 2.74
2700 4254 7.227116 CAGTTGGACAAAATTGATGGATGTTTT 59.773 33.333 0.00 0.00 0.00 2.43
2721 4277 7.011950 TGTTTTGTACTAATATGATCCAAGCGG 59.988 37.037 0.00 0.00 0.00 5.52
2743 4302 5.851177 CGGCCATAATCAAATTAATCACGAC 59.149 40.000 2.24 0.00 0.00 4.34
2759 4318 3.118775 TCACGACCTCCAATTAGTCATGG 60.119 47.826 0.00 0.00 38.09 3.66
2771 4333 8.088365 TCCAATTAGTCATGGATATAGTGAACG 58.912 37.037 0.00 0.00 40.74 3.95
2838 4403 1.129437 GCGGAATGCAGTTTCTGTCTC 59.871 52.381 9.94 0.00 45.45 3.36
2853 4418 4.876125 TCTGTCTCTGTGAACTTGATGTC 58.124 43.478 0.00 0.00 0.00 3.06
2889 4458 5.200454 CAGATCGTTGTTTTCTGACTTGTG 58.800 41.667 0.00 0.00 39.36 3.33
2891 4460 4.593597 TCGTTGTTTTCTGACTTGTGAC 57.406 40.909 0.00 0.00 0.00 3.67
2892 4461 3.997681 TCGTTGTTTTCTGACTTGTGACA 59.002 39.130 0.00 0.00 0.00 3.58
2894 4463 5.123186 TCGTTGTTTTCTGACTTGTGACAAT 59.877 36.000 0.00 0.00 0.00 2.71
2895 4464 5.452302 CGTTGTTTTCTGACTTGTGACAATC 59.548 40.000 0.00 0.00 0.00 2.67
3096 4668 2.106131 TTCGTCATCGGCATCGGG 59.894 61.111 0.00 0.00 37.69 5.14
3739 5314 1.112315 CCTGCTGCGGAGGATAGAGT 61.112 60.000 10.70 0.00 31.48 3.24
3846 5421 3.753070 CTCCGAGCGGAACTACGGC 62.753 68.421 13.15 0.00 44.66 5.68
3946 5525 2.588439 GGACGGTAAGGCCCTTCC 59.412 66.667 0.00 0.18 44.51 3.46
3959 5538 2.184579 CTTCCGGCTCCGTCTTCC 59.815 66.667 7.59 0.00 37.81 3.46
4020 5604 4.658713 TCATACGTCGTCCGAGAATATC 57.341 45.455 0.00 0.00 40.70 1.63
4030 5614 3.321111 GTCCGAGAATATCTGGTGCCTTA 59.679 47.826 0.00 0.00 0.00 2.69
4031 5615 3.964688 TCCGAGAATATCTGGTGCCTTAA 59.035 43.478 0.00 0.00 0.00 1.85
4078 5662 6.293190 CGTCTTTGGCATTTCTACTTTGTGTA 60.293 38.462 0.00 0.00 0.00 2.90
4079 5663 7.573096 CGTCTTTGGCATTTCTACTTTGTGTAT 60.573 37.037 0.00 0.00 0.00 2.29
4080 5664 8.726988 GTCTTTGGCATTTCTACTTTGTGTATA 58.273 33.333 0.00 0.00 0.00 1.47
4081 5665 9.461312 TCTTTGGCATTTCTACTTTGTGTATAT 57.539 29.630 0.00 0.00 0.00 0.86
4082 5666 9.507280 CTTTGGCATTTCTACTTTGTGTATATG 57.493 33.333 0.00 0.00 0.00 1.78
4083 5667 8.800370 TTGGCATTTCTACTTTGTGTATATGA 57.200 30.769 0.00 0.00 0.00 2.15
4084 5668 8.437360 TGGCATTTCTACTTTGTGTATATGAG 57.563 34.615 0.00 0.00 0.00 2.90
4085 5669 8.264347 TGGCATTTCTACTTTGTGTATATGAGA 58.736 33.333 0.00 0.00 0.00 3.27
4086 5670 8.552034 GGCATTTCTACTTTGTGTATATGAGAC 58.448 37.037 0.00 0.00 0.00 3.36
4087 5671 9.098355 GCATTTCTACTTTGTGTATATGAGACA 57.902 33.333 0.00 0.00 0.00 3.41
4130 5714 1.871126 GCCTCTGTCTTTTGCAGGCC 61.871 60.000 0.00 0.00 43.43 5.19
4169 5753 0.537143 TCGCCTTGGCATTTGTCACT 60.537 50.000 12.45 0.00 0.00 3.41
4238 5822 2.015736 AAGCGAGCGAAGATGTTGAT 57.984 45.000 0.00 0.00 0.00 2.57
4241 5825 1.212616 CGAGCGAAGATGTTGATCCC 58.787 55.000 0.00 0.00 0.00 3.85
4243 5827 0.537188 AGCGAAGATGTTGATCCCGT 59.463 50.000 0.00 0.00 31.45 5.28
4357 5955 3.658757 TTTGGGTAACATTTGCTGCTC 57.341 42.857 0.00 0.00 39.74 4.26
4450 6048 1.069978 TGACCATCAGAAACGCACAGA 59.930 47.619 0.00 0.00 0.00 3.41
4451 6049 2.143122 GACCATCAGAAACGCACAGAA 58.857 47.619 0.00 0.00 0.00 3.02
4455 6053 1.953559 TCAGAAACGCACAGAAAGCT 58.046 45.000 0.00 0.00 0.00 3.74
4586 6236 7.716998 TGGCCAATATTTGTACAAACAACAATT 59.283 29.630 22.78 13.76 45.18 2.32
4616 6266 9.384849 TGATAGGATTCCTCTTGATTCATTCTA 57.615 33.333 8.94 0.00 34.61 2.10
4646 6296 5.171476 TCTTCTCTGCACATAAAGCTGTAC 58.829 41.667 0.00 0.00 33.36 2.90
4679 6329 9.613428 TGTACATAGGACAAAAATATTCAGGAG 57.387 33.333 0.00 0.00 0.00 3.69
4698 6348 1.891150 AGAAGGCTGCCAATTTGTCAG 59.109 47.619 22.65 3.11 0.00 3.51
4720 6370 3.921021 GGTGTACTGTTCTTCTCGTGATG 59.079 47.826 0.00 0.00 0.00 3.07
4725 6375 2.670414 CTGTTCTTCTCGTGATGCTTCC 59.330 50.000 0.00 0.00 0.00 3.46
4730 6380 4.748892 TCTTCTCGTGATGCTTCCTAAAG 58.251 43.478 0.00 0.00 35.47 1.85
4743 6393 2.184533 TCCTAAAGGCATCTCCAACGA 58.815 47.619 0.00 0.00 37.29 3.85
4757 6407 1.606994 CCAACGACGACCCTCAAATCA 60.607 52.381 0.00 0.00 0.00 2.57
4759 6409 0.246635 ACGACGACCCTCAAATCAGG 59.753 55.000 0.00 0.00 0.00 3.86
4762 6412 0.321653 ACGACCCTCAAATCAGGCAC 60.322 55.000 0.00 0.00 31.23 5.01
4765 6415 0.706433 ACCCTCAAATCAGGCACCAT 59.294 50.000 0.00 0.00 31.23 3.55
4766 6416 1.341383 ACCCTCAAATCAGGCACCATC 60.341 52.381 0.00 0.00 31.23 3.51
4767 6417 1.396653 CCTCAAATCAGGCACCATCC 58.603 55.000 0.00 0.00 0.00 3.51
4768 6418 1.019673 CTCAAATCAGGCACCATCCG 58.980 55.000 0.00 0.00 0.00 4.18
4769 6419 0.327924 TCAAATCAGGCACCATCCGT 59.672 50.000 0.00 0.00 0.00 4.69
4770 6420 0.734889 CAAATCAGGCACCATCCGTC 59.265 55.000 0.00 0.00 0.00 4.79
4772 6422 0.107508 AATCAGGCACCATCCGTCTG 60.108 55.000 0.00 0.00 0.00 3.51
4773 6423 2.599645 ATCAGGCACCATCCGTCTGC 62.600 60.000 0.00 0.00 0.00 4.26
4774 6424 3.321648 AGGCACCATCCGTCTGCA 61.322 61.111 0.00 0.00 32.20 4.41
4775 6425 3.127533 GGCACCATCCGTCTGCAC 61.128 66.667 0.00 0.00 32.20 4.57
4776 6426 2.358615 GCACCATCCGTCTGCACA 60.359 61.111 0.00 0.00 0.00 4.57
4777 6427 2.680913 GCACCATCCGTCTGCACAC 61.681 63.158 0.00 0.00 0.00 3.82
4778 6428 1.004560 CACCATCCGTCTGCACACT 60.005 57.895 0.00 0.00 0.00 3.55
4779 6429 0.603707 CACCATCCGTCTGCACACTT 60.604 55.000 0.00 0.00 0.00 3.16
4780 6430 0.603707 ACCATCCGTCTGCACACTTG 60.604 55.000 0.00 0.00 0.00 3.16
4782 6432 0.792640 CATCCGTCTGCACACTTGTC 59.207 55.000 0.00 0.00 0.00 3.18
4789 6439 0.603707 CTGCACACTTGTCCGGACAT 60.604 55.000 36.52 21.35 41.52 3.06
4804 6454 2.268920 CATGGGTCCGGACAGTGG 59.731 66.667 34.40 17.67 0.00 4.00
4806 6456 1.846124 ATGGGTCCGGACAGTGGTT 60.846 57.895 34.40 10.99 0.00 3.67
4808 6458 2.346365 GGTCCGGACAGTGGTTCC 59.654 66.667 34.40 12.37 0.00 3.62
4822 6472 0.323629 GGTTCCGGAGTCAACCATCA 59.676 55.000 16.67 0.00 41.65 3.07
4827 6477 2.370519 TCCGGAGTCAACCATCAAAAGA 59.629 45.455 0.00 0.00 0.00 2.52
4831 6481 5.419542 CGGAGTCAACCATCAAAAGATAGA 58.580 41.667 0.00 0.00 0.00 1.98
5005 6661 6.566141 CAGACTAAGCTTTCTAACCTAGTCC 58.434 44.000 3.20 0.00 34.80 3.85
5019 6675 2.165845 CCTAGTCCAAAAGATCGTCGGT 59.834 50.000 0.00 0.00 0.00 4.69
5083 6740 1.678101 GCAACAAGCTCACAGGAAAGT 59.322 47.619 0.00 0.00 41.15 2.66
5085 6742 1.871080 ACAAGCTCACAGGAAAGTCG 58.129 50.000 0.00 0.00 0.00 4.18
5095 6752 3.119096 GAAAGTCGTGAGCCCCGC 61.119 66.667 0.00 0.00 0.00 6.13
5101 6758 2.436646 CGTGAGCCCCGCAAGATT 60.437 61.111 0.00 0.00 43.02 2.40
5104 6761 0.733150 GTGAGCCCCGCAAGATTAAC 59.267 55.000 0.00 0.00 43.02 2.01
5115 6773 3.279434 GCAAGATTAACCTTCACGGGAT 58.721 45.455 0.00 0.00 36.97 3.85
5134 6792 2.058595 GGGAAGAGTAGCCTCCGCA 61.059 63.158 0.00 0.00 38.58 5.69
5139 6797 1.834822 GAGTAGCCTCCGCATCCCT 60.835 63.158 0.00 0.00 37.52 4.20
5160 6818 2.513897 GCGGGCAAGCTAATCGGT 60.514 61.111 0.00 0.00 0.00 4.69
5211 6881 0.042881 GGGAGGGGAAGAGTAGTGGT 59.957 60.000 0.00 0.00 0.00 4.16
5213 6883 1.487300 GAGGGGAAGAGTAGTGGTCC 58.513 60.000 0.00 0.00 0.00 4.46
5218 6888 1.229082 AAGAGTAGTGGTCCCCGCA 60.229 57.895 0.00 0.00 36.32 5.69
5240 6910 3.175724 CGAAGCAGGCAAGCTCAG 58.824 61.111 4.92 0.00 45.89 3.35
5241 6912 1.375140 CGAAGCAGGCAAGCTCAGA 60.375 57.895 4.92 0.00 45.89 3.27
5313 6985 3.458163 CGGCCTCCCACGCTCTAA 61.458 66.667 0.00 0.00 0.00 2.10
5333 7005 0.106868 TCTTCCTCACTATCGGCGGA 60.107 55.000 7.21 0.00 0.00 5.54
5357 7029 2.188829 TGGACGTGTCGACCTCGTT 61.189 57.895 27.24 16.27 41.68 3.85
5369 7041 1.287815 CCTCGTTGTCGTGGTAGCA 59.712 57.895 0.00 0.00 43.14 3.49
5397 7069 2.604174 CGACGTGGAGTTGGCAACC 61.604 63.158 25.81 16.86 0.00 3.77
5402 7075 0.951040 GTGGAGTTGGCAACCTCTCG 60.951 60.000 25.81 0.00 0.00 4.04
5408 7081 1.407656 TTGGCAACCTCTCGGTGTCT 61.408 55.000 0.00 0.00 44.73 3.41
5409 7082 1.079750 GGCAACCTCTCGGTGTCTC 60.080 63.158 0.00 0.00 44.73 3.36
5412 7085 0.109689 CAACCTCTCGGTGTCTCGTC 60.110 60.000 0.00 0.00 44.73 4.20
5423 7096 2.289444 GGTGTCTCGTCAAATTCCTCCA 60.289 50.000 0.00 0.00 0.00 3.86
5425 7098 2.367241 TGTCTCGTCAAATTCCTCCACA 59.633 45.455 0.00 0.00 0.00 4.17
5427 7101 4.003648 GTCTCGTCAAATTCCTCCACAAT 58.996 43.478 0.00 0.00 0.00 2.71
5466 7140 5.665459 GAACATAGCTTCTTTCTCTGCCTA 58.335 41.667 0.00 0.00 0.00 3.93
5490 7164 4.087892 ACGGAGCTGCCATCGCTT 62.088 61.111 0.00 0.00 37.96 4.68
5494 7168 4.809496 AGCTGCCATCGCTTGGGG 62.809 66.667 0.00 0.00 46.55 4.96
5536 7210 3.595691 CGATAGGAGCATCGCCTTT 57.404 52.632 0.00 0.00 41.12 3.11
5550 7224 1.539388 CGCCTTTTGCTTGTCCATGTA 59.461 47.619 0.00 0.00 38.05 2.29
5551 7225 2.164219 CGCCTTTTGCTTGTCCATGTAT 59.836 45.455 0.00 0.00 38.05 2.29
5587 7261 2.342650 GGCAATTTGCTCCTCCGCA 61.343 57.895 20.06 0.00 44.28 5.69
5592 7266 3.387716 TTGCTCCTCCGCAAGCTA 58.612 55.556 0.00 0.00 44.30 3.32
5611 7285 2.360726 TGCTAGGTGACGAGGCGA 60.361 61.111 0.00 0.00 33.10 5.54
5613 7287 1.320344 TGCTAGGTGACGAGGCGAAT 61.320 55.000 0.00 0.00 33.10 3.34
5632 7306 1.116536 TGTTGTACCTCTGGTCGGCA 61.117 55.000 0.00 0.00 37.09 5.69
5648 7322 4.260355 CATGCGCCTGCCGGAATG 62.260 66.667 5.05 0.00 41.78 2.67
5653 7327 2.822255 GCCTGCCGGAATGCGTAA 60.822 61.111 5.05 0.00 0.00 3.18
5654 7328 2.186826 GCCTGCCGGAATGCGTAAT 61.187 57.895 5.05 0.00 0.00 1.89
5655 7329 1.648720 CCTGCCGGAATGCGTAATG 59.351 57.895 5.05 0.00 0.00 1.90
5656 7330 1.648720 CTGCCGGAATGCGTAATGG 59.351 57.895 5.05 0.00 0.00 3.16
5657 7331 0.813610 CTGCCGGAATGCGTAATGGA 60.814 55.000 5.05 0.00 0.00 3.41
5658 7332 0.813610 TGCCGGAATGCGTAATGGAG 60.814 55.000 5.05 0.00 0.00 3.86
5659 7333 0.814010 GCCGGAATGCGTAATGGAGT 60.814 55.000 5.05 0.00 0.00 3.85
5660 7334 1.217882 CCGGAATGCGTAATGGAGTC 58.782 55.000 0.00 0.00 31.63 3.36
5661 7335 1.472552 CCGGAATGCGTAATGGAGTCA 60.473 52.381 0.00 0.00 34.38 3.41
5662 7336 2.276201 CGGAATGCGTAATGGAGTCAA 58.724 47.619 0.00 0.00 34.38 3.18
5663 7337 2.675844 CGGAATGCGTAATGGAGTCAAA 59.324 45.455 0.00 0.00 34.38 2.69
5664 7338 3.312421 CGGAATGCGTAATGGAGTCAAAT 59.688 43.478 0.00 0.00 34.38 2.32
5665 7339 4.552767 CGGAATGCGTAATGGAGTCAAATC 60.553 45.833 0.00 0.00 34.38 2.17
5666 7340 4.261197 GGAATGCGTAATGGAGTCAAATCC 60.261 45.833 0.00 0.00 34.38 3.01
5674 7348 3.272574 TGGAGTCAAATCCAGCAGATC 57.727 47.619 0.00 0.00 44.56 2.75
5675 7349 2.842496 TGGAGTCAAATCCAGCAGATCT 59.158 45.455 0.00 0.00 44.56 2.75
5676 7350 3.118482 TGGAGTCAAATCCAGCAGATCTC 60.118 47.826 0.00 0.00 44.56 2.75
5677 7351 3.122297 GAGTCAAATCCAGCAGATCTCG 58.878 50.000 0.00 0.00 32.47 4.04
5678 7352 2.762887 AGTCAAATCCAGCAGATCTCGA 59.237 45.455 0.00 0.00 32.47 4.04
5679 7353 3.122297 GTCAAATCCAGCAGATCTCGAG 58.878 50.000 5.93 5.93 32.47 4.04
5680 7354 2.762887 TCAAATCCAGCAGATCTCGAGT 59.237 45.455 13.13 0.00 32.47 4.18
5681 7355 2.864946 CAAATCCAGCAGATCTCGAGTG 59.135 50.000 13.13 4.64 32.47 3.51
5682 7356 1.039068 ATCCAGCAGATCTCGAGTGG 58.961 55.000 13.13 11.60 0.00 4.00
5683 7357 1.039785 TCCAGCAGATCTCGAGTGGG 61.040 60.000 13.13 1.72 0.00 4.61
5684 7358 1.440893 CAGCAGATCTCGAGTGGGG 59.559 63.158 13.13 2.57 0.00 4.96
5685 7359 1.760086 AGCAGATCTCGAGTGGGGG 60.760 63.158 13.13 1.12 0.00 5.40
5686 7360 2.060980 GCAGATCTCGAGTGGGGGT 61.061 63.158 13.13 0.00 0.00 4.95
5687 7361 1.617947 GCAGATCTCGAGTGGGGGTT 61.618 60.000 13.13 0.00 0.00 4.11
5688 7362 1.776662 CAGATCTCGAGTGGGGGTTA 58.223 55.000 13.13 0.00 0.00 2.85
5689 7363 1.409427 CAGATCTCGAGTGGGGGTTAC 59.591 57.143 13.13 0.00 0.00 2.50
5690 7364 0.384669 GATCTCGAGTGGGGGTTACG 59.615 60.000 13.13 0.00 0.00 3.18
5691 7365 0.324091 ATCTCGAGTGGGGGTTACGT 60.324 55.000 13.13 0.00 0.00 3.57
5692 7366 1.214589 CTCGAGTGGGGGTTACGTG 59.785 63.158 3.62 0.00 0.00 4.49
5693 7367 2.433664 CGAGTGGGGGTTACGTGC 60.434 66.667 0.00 0.00 0.00 5.34
5694 7368 2.939261 CGAGTGGGGGTTACGTGCT 61.939 63.158 0.00 0.00 0.00 4.40
5695 7369 1.375523 GAGTGGGGGTTACGTGCTG 60.376 63.158 0.00 0.00 0.00 4.41
5696 7370 1.823169 GAGTGGGGGTTACGTGCTGA 61.823 60.000 0.00 0.00 0.00 4.26
5697 7371 1.198759 AGTGGGGGTTACGTGCTGAT 61.199 55.000 0.00 0.00 0.00 2.90
5698 7372 0.538118 GTGGGGGTTACGTGCTGATA 59.462 55.000 0.00 0.00 0.00 2.15
5699 7373 0.828022 TGGGGGTTACGTGCTGATAG 59.172 55.000 0.00 0.00 0.00 2.08
5700 7374 0.828677 GGGGGTTACGTGCTGATAGT 59.171 55.000 0.00 0.00 0.00 2.12
5701 7375 1.202498 GGGGGTTACGTGCTGATAGTC 60.202 57.143 0.00 0.00 0.00 2.59
5702 7376 1.755380 GGGGTTACGTGCTGATAGTCT 59.245 52.381 0.00 0.00 0.00 3.24
5703 7377 2.167900 GGGGTTACGTGCTGATAGTCTT 59.832 50.000 0.00 0.00 0.00 3.01
5704 7378 3.187700 GGGTTACGTGCTGATAGTCTTG 58.812 50.000 0.00 0.00 0.00 3.02
5705 7379 3.187700 GGTTACGTGCTGATAGTCTTGG 58.812 50.000 0.00 0.00 0.00 3.61
5706 7380 2.579207 TACGTGCTGATAGTCTTGGC 57.421 50.000 0.00 0.00 0.00 4.52
5707 7381 0.608130 ACGTGCTGATAGTCTTGGCA 59.392 50.000 0.00 0.00 0.00 4.92
5708 7382 1.002366 CGTGCTGATAGTCTTGGCAC 58.998 55.000 0.00 0.00 46.41 5.01
5709 7383 1.002366 GTGCTGATAGTCTTGGCACG 58.998 55.000 0.00 0.00 42.53 5.34
5710 7384 0.894835 TGCTGATAGTCTTGGCACGA 59.105 50.000 0.00 0.00 0.00 4.35
5711 7385 1.482182 TGCTGATAGTCTTGGCACGAT 59.518 47.619 0.00 0.00 0.00 3.73
5712 7386 1.863454 GCTGATAGTCTTGGCACGATG 59.137 52.381 0.00 0.00 0.00 3.84
5713 7387 2.477825 CTGATAGTCTTGGCACGATGG 58.522 52.381 0.00 0.00 0.00 3.51
5714 7388 1.831106 TGATAGTCTTGGCACGATGGT 59.169 47.619 0.00 0.00 0.00 3.55
5715 7389 3.028130 TGATAGTCTTGGCACGATGGTA 58.972 45.455 0.00 0.00 0.00 3.25
5716 7390 3.449377 TGATAGTCTTGGCACGATGGTAA 59.551 43.478 0.00 0.00 0.00 2.85
5717 7391 2.094762 AGTCTTGGCACGATGGTAAC 57.905 50.000 0.00 0.00 0.00 2.50
5736 7410 7.913789 TGGTAACAGGAACATATGAGTTTACT 58.086 34.615 10.38 0.00 46.17 2.24
5737 7411 7.822334 TGGTAACAGGAACATATGAGTTTACTG 59.178 37.037 10.38 11.95 46.17 2.74
5738 7412 7.822822 GGTAACAGGAACATATGAGTTTACTGT 59.177 37.037 13.93 13.93 44.45 3.55
5739 7413 9.865321 GTAACAGGAACATATGAGTTTACTGTA 57.135 33.333 18.07 8.11 43.14 2.74
5741 7415 8.773404 ACAGGAACATATGAGTTTACTGTAAC 57.227 34.615 16.84 0.00 42.65 2.50
5742 7416 8.372459 ACAGGAACATATGAGTTTACTGTAACA 58.628 33.333 16.84 0.00 42.65 2.41
5743 7417 8.656849 CAGGAACATATGAGTTTACTGTAACAC 58.343 37.037 10.38 2.86 34.69 3.32
5744 7418 7.822822 AGGAACATATGAGTTTACTGTAACACC 59.177 37.037 10.38 0.00 0.00 4.16
5745 7419 7.604927 GGAACATATGAGTTTACTGTAACACCA 59.395 37.037 10.38 0.00 0.00 4.17
5746 7420 9.162764 GAACATATGAGTTTACTGTAACACCAT 57.837 33.333 10.38 6.41 32.38 3.55
5747 7421 8.492673 ACATATGAGTTTACTGTAACACCATG 57.507 34.615 10.38 5.88 31.13 3.66
5748 7422 8.318412 ACATATGAGTTTACTGTAACACCATGA 58.682 33.333 10.38 0.00 31.13 3.07
5749 7423 9.330063 CATATGAGTTTACTGTAACACCATGAT 57.670 33.333 0.00 0.00 31.13 2.45
5750 7424 9.905713 ATATGAGTTTACTGTAACACCATGATT 57.094 29.630 0.00 0.00 31.13 2.57
5751 7425 8.635765 ATGAGTTTACTGTAACACCATGATTT 57.364 30.769 0.00 0.00 0.00 2.17
5752 7426 8.458573 TGAGTTTACTGTAACACCATGATTTT 57.541 30.769 0.00 0.00 0.00 1.82
5753 7427 8.908903 TGAGTTTACTGTAACACCATGATTTTT 58.091 29.630 0.00 0.00 0.00 1.94
5754 7428 9.180678 GAGTTTACTGTAACACCATGATTTTTG 57.819 33.333 0.00 0.00 0.00 2.44
5755 7429 8.141268 AGTTTACTGTAACACCATGATTTTTGG 58.859 33.333 0.00 0.00 40.26 3.28
5756 7430 4.881920 ACTGTAACACCATGATTTTTGGC 58.118 39.130 0.00 0.00 37.81 4.52
5757 7431 4.244862 CTGTAACACCATGATTTTTGGCC 58.755 43.478 0.00 0.00 37.81 5.36
5758 7432 3.900601 TGTAACACCATGATTTTTGGCCT 59.099 39.130 3.32 0.00 37.81 5.19
5759 7433 4.346418 TGTAACACCATGATTTTTGGCCTT 59.654 37.500 3.32 0.00 37.81 4.35
5760 7434 4.436113 AACACCATGATTTTTGGCCTTT 57.564 36.364 3.32 0.00 37.81 3.11
5761 7435 4.436113 ACACCATGATTTTTGGCCTTTT 57.564 36.364 3.32 0.00 37.81 2.27
5762 7436 4.790937 ACACCATGATTTTTGGCCTTTTT 58.209 34.783 3.32 0.00 37.81 1.94
5763 7437 4.821260 ACACCATGATTTTTGGCCTTTTTC 59.179 37.500 3.32 0.00 37.81 2.29
5764 7438 5.065235 CACCATGATTTTTGGCCTTTTTCT 58.935 37.500 3.32 0.00 37.81 2.52
5765 7439 5.532032 CACCATGATTTTTGGCCTTTTTCTT 59.468 36.000 3.32 0.00 37.81 2.52
5766 7440 6.039605 CACCATGATTTTTGGCCTTTTTCTTT 59.960 34.615 3.32 0.00 37.81 2.52
5767 7441 6.606796 ACCATGATTTTTGGCCTTTTTCTTTT 59.393 30.769 3.32 0.00 37.81 2.27
5768 7442 7.123997 ACCATGATTTTTGGCCTTTTTCTTTTT 59.876 29.630 3.32 0.00 37.81 1.94
5769 7443 7.648908 CCATGATTTTTGGCCTTTTTCTTTTTC 59.351 33.333 3.32 0.00 0.00 2.29
5770 7444 7.094508 TGATTTTTGGCCTTTTTCTTTTTCC 57.905 32.000 3.32 0.00 0.00 3.13
5771 7445 6.660949 TGATTTTTGGCCTTTTTCTTTTTCCA 59.339 30.769 3.32 0.00 0.00 3.53
5772 7446 6.901081 TTTTTGGCCTTTTTCTTTTTCCAA 57.099 29.167 3.32 0.00 0.00 3.53
5773 7447 6.901081 TTTTGGCCTTTTTCTTTTTCCAAA 57.099 29.167 3.32 0.00 39.47 3.28
5774 7448 6.507958 TTTGGCCTTTTTCTTTTTCCAAAG 57.492 33.333 3.32 0.00 40.91 2.77
5775 7449 5.428184 TGGCCTTTTTCTTTTTCCAAAGA 57.572 34.783 3.32 0.00 45.63 2.52
5776 7450 6.000246 TGGCCTTTTTCTTTTTCCAAAGAT 58.000 33.333 3.32 0.00 46.36 2.40
5777 7451 6.054941 TGGCCTTTTTCTTTTTCCAAAGATC 58.945 36.000 3.32 0.00 46.36 2.75
5778 7452 6.126796 TGGCCTTTTTCTTTTTCCAAAGATCT 60.127 34.615 3.32 0.00 46.36 2.75
5779 7453 6.767902 GGCCTTTTTCTTTTTCCAAAGATCTT 59.232 34.615 0.88 0.88 46.36 2.40
5780 7454 7.283127 GGCCTTTTTCTTTTTCCAAAGATCTTT 59.717 33.333 15.11 15.11 46.36 2.52
5781 7455 8.677300 GCCTTTTTCTTTTTCCAAAGATCTTTT 58.323 29.630 18.16 1.32 46.36 2.27
5782 7456 9.992910 CCTTTTTCTTTTTCCAAAGATCTTTTG 57.007 29.630 18.16 14.86 46.36 2.44
5783 7457 9.992910 CTTTTTCTTTTTCCAAAGATCTTTTGG 57.007 29.630 18.16 20.16 46.36 3.28
5815 7489 5.441709 CAAATTGGCTTTGGATTTGCTTT 57.558 34.783 0.00 0.00 40.52 3.51
5816 7490 5.834169 CAAATTGGCTTTGGATTTGCTTTT 58.166 33.333 0.00 0.00 40.52 2.27
5817 7491 6.274579 CAAATTGGCTTTGGATTTGCTTTTT 58.725 32.000 0.00 0.00 40.52 1.94
5818 7492 4.897025 TTGGCTTTGGATTTGCTTTTTG 57.103 36.364 0.00 0.00 0.00 2.44
5819 7493 4.148128 TGGCTTTGGATTTGCTTTTTGA 57.852 36.364 0.00 0.00 0.00 2.69
5820 7494 4.521146 TGGCTTTGGATTTGCTTTTTGAA 58.479 34.783 0.00 0.00 0.00 2.69
5821 7495 5.131784 TGGCTTTGGATTTGCTTTTTGAAT 58.868 33.333 0.00 0.00 0.00 2.57
5822 7496 5.008811 TGGCTTTGGATTTGCTTTTTGAATG 59.991 36.000 0.00 0.00 0.00 2.67
5823 7497 5.454520 GCTTTGGATTTGCTTTTTGAATGG 58.545 37.500 0.00 0.00 0.00 3.16
5824 7498 5.435820 TTTGGATTTGCTTTTTGAATGGC 57.564 34.783 0.00 0.00 0.00 4.40
5825 7499 4.354893 TGGATTTGCTTTTTGAATGGCT 57.645 36.364 0.00 0.00 0.00 4.75
5826 7500 4.317488 TGGATTTGCTTTTTGAATGGCTC 58.683 39.130 0.00 0.00 0.00 4.70
5827 7501 3.686241 GGATTTGCTTTTTGAATGGCTCC 59.314 43.478 0.00 0.00 0.00 4.70
5828 7502 3.834489 TTTGCTTTTTGAATGGCTCCA 57.166 38.095 0.00 0.00 0.00 3.86
5829 7503 4.354893 TTTGCTTTTTGAATGGCTCCAT 57.645 36.364 0.00 0.00 38.46 3.41
5830 7504 3.322211 TGCTTTTTGAATGGCTCCATG 57.678 42.857 1.59 0.00 36.68 3.66
5831 7505 2.027929 TGCTTTTTGAATGGCTCCATGG 60.028 45.455 4.97 4.97 36.68 3.66
5832 7506 2.234414 GCTTTTTGAATGGCTCCATGGA 59.766 45.455 15.27 15.27 36.68 3.41
5833 7507 3.853475 CTTTTTGAATGGCTCCATGGAC 58.147 45.455 11.44 8.06 36.68 4.02
5834 7508 2.905415 TTTGAATGGCTCCATGGACT 57.095 45.000 11.44 0.00 36.68 3.85
5835 7509 2.425143 TTGAATGGCTCCATGGACTC 57.575 50.000 11.44 6.49 36.68 3.36
5836 7510 1.288188 TGAATGGCTCCATGGACTCA 58.712 50.000 11.44 12.38 36.68 3.41
5837 7511 1.634973 TGAATGGCTCCATGGACTCAA 59.365 47.619 11.44 0.00 36.68 3.02
5838 7512 2.041485 TGAATGGCTCCATGGACTCAAA 59.959 45.455 11.44 0.00 36.68 2.69
5839 7513 3.294214 GAATGGCTCCATGGACTCAAAT 58.706 45.455 11.44 5.75 36.68 2.32
5840 7514 2.425143 TGGCTCCATGGACTCAAATC 57.575 50.000 11.44 0.00 0.00 2.17
5841 7515 1.918262 TGGCTCCATGGACTCAAATCT 59.082 47.619 11.44 0.00 0.00 2.40
5842 7516 2.309755 TGGCTCCATGGACTCAAATCTT 59.690 45.455 11.44 0.00 0.00 2.40
5843 7517 2.686915 GGCTCCATGGACTCAAATCTTG 59.313 50.000 11.44 0.00 0.00 3.02
5844 7518 2.686915 GCTCCATGGACTCAAATCTTGG 59.313 50.000 11.44 0.00 0.00 3.61
5845 7519 3.285484 CTCCATGGACTCAAATCTTGGG 58.715 50.000 11.44 0.00 37.11 4.12
5846 7520 2.918934 TCCATGGACTCAAATCTTGGGA 59.081 45.455 11.44 0.00 34.45 4.37
5847 7521 3.333381 TCCATGGACTCAAATCTTGGGAA 59.667 43.478 11.44 0.00 34.45 3.97
5848 7522 4.017222 TCCATGGACTCAAATCTTGGGAAT 60.017 41.667 11.44 0.00 34.45 3.01
5849 7523 5.193527 TCCATGGACTCAAATCTTGGGAATA 59.806 40.000 11.44 0.00 34.45 1.75
5850 7524 5.533903 CCATGGACTCAAATCTTGGGAATAG 59.466 44.000 5.56 0.00 34.45 1.73
5851 7525 4.526970 TGGACTCAAATCTTGGGAATAGC 58.473 43.478 0.00 0.00 34.45 2.97
5852 7526 4.228210 TGGACTCAAATCTTGGGAATAGCT 59.772 41.667 0.00 0.00 34.45 3.32
5853 7527 5.196695 GGACTCAAATCTTGGGAATAGCTT 58.803 41.667 0.00 0.00 34.45 3.74
5854 7528 5.654209 GGACTCAAATCTTGGGAATAGCTTT 59.346 40.000 0.00 0.00 34.45 3.51
5855 7529 6.183360 GGACTCAAATCTTGGGAATAGCTTTC 60.183 42.308 0.00 0.00 34.45 2.62
5856 7530 5.355350 ACTCAAATCTTGGGAATAGCTTTCG 59.645 40.000 0.00 0.00 34.45 3.46
5857 7531 5.253330 TCAAATCTTGGGAATAGCTTTCGT 58.747 37.500 0.00 0.00 0.00 3.85
5858 7532 5.710099 TCAAATCTTGGGAATAGCTTTCGTT 59.290 36.000 0.00 0.00 0.00 3.85
5859 7533 6.208599 TCAAATCTTGGGAATAGCTTTCGTTT 59.791 34.615 0.00 0.00 0.00 3.60
5860 7534 5.819825 ATCTTGGGAATAGCTTTCGTTTC 57.180 39.130 0.00 0.00 0.00 2.78
5861 7535 4.007659 TCTTGGGAATAGCTTTCGTTTCC 58.992 43.478 0.00 0.00 37.49 3.13
5862 7536 3.713826 TGGGAATAGCTTTCGTTTCCT 57.286 42.857 0.00 0.00 38.15 3.36
5863 7537 4.028993 TGGGAATAGCTTTCGTTTCCTT 57.971 40.909 0.00 0.00 38.15 3.36
5864 7538 4.403734 TGGGAATAGCTTTCGTTTCCTTT 58.596 39.130 0.00 0.00 38.15 3.11
5865 7539 4.457949 TGGGAATAGCTTTCGTTTCCTTTC 59.542 41.667 0.00 0.00 38.15 2.62
5866 7540 4.142447 GGGAATAGCTTTCGTTTCCTTTCC 60.142 45.833 0.00 0.00 38.15 3.13
5867 7541 4.142447 GGAATAGCTTTCGTTTCCTTTCCC 60.142 45.833 0.00 0.00 35.74 3.97
5868 7542 2.358322 AGCTTTCGTTTCCTTTCCCA 57.642 45.000 0.00 0.00 0.00 4.37
5869 7543 2.661718 AGCTTTCGTTTCCTTTCCCAA 58.338 42.857 0.00 0.00 0.00 4.12
5870 7544 2.623416 AGCTTTCGTTTCCTTTCCCAAG 59.377 45.455 0.00 0.00 0.00 3.61
5871 7545 2.361119 GCTTTCGTTTCCTTTCCCAAGT 59.639 45.455 0.00 0.00 0.00 3.16
5872 7546 3.795488 GCTTTCGTTTCCTTTCCCAAGTG 60.795 47.826 0.00 0.00 0.00 3.16
5873 7547 3.284793 TTCGTTTCCTTTCCCAAGTGA 57.715 42.857 0.00 0.00 0.00 3.41
5874 7548 3.284793 TCGTTTCCTTTCCCAAGTGAA 57.715 42.857 0.00 0.00 0.00 3.18
5875 7549 3.622630 TCGTTTCCTTTCCCAAGTGAAA 58.377 40.909 0.00 0.00 31.80 2.69
5876 7550 4.211920 TCGTTTCCTTTCCCAAGTGAAAT 58.788 39.130 0.00 0.00 34.47 2.17
5877 7551 5.378332 TCGTTTCCTTTCCCAAGTGAAATA 58.622 37.500 0.00 0.00 34.47 1.40
6113 7787 8.799367 TCATTTGATTAATGGGATCACATCATC 58.201 33.333 11.76 15.55 43.19 2.92
6173 7847 5.805994 AGCTTAGCACTTGATCGTTTAGTAC 59.194 40.000 7.07 0.00 0.00 2.73
6196 7870 5.026462 CGTTGCTATTGCTTTCTTCATGAG 58.974 41.667 0.00 0.00 40.48 2.90
6197 7871 4.627611 TGCTATTGCTTTCTTCATGAGC 57.372 40.909 0.00 0.00 40.48 4.26
6600 8274 2.607635 GCGCTTTGACCGATAAAGATCA 59.392 45.455 0.00 0.00 37.33 2.92
6781 8455 2.150397 CGAAGTTTGTTCGGAGTCCT 57.850 50.000 7.77 0.00 38.19 3.85
6793 8467 1.690893 CGGAGTCCTGGATGTGATCAT 59.309 52.381 7.77 0.00 36.95 2.45
6821 8495 4.722361 GACGAGGAGTCTCTAAATGGTT 57.278 45.455 0.00 0.00 46.13 3.67
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
37 38 1.135315 GTACAGGTACACGCGAATCCA 60.135 52.381 15.93 0.00 36.15 3.41
86 88 4.106925 GCCCTCTCCCTGCCACAG 62.107 72.222 0.00 0.00 0.00 3.66
92 94 3.382803 CTTGCTCGCCCTCTCCCTG 62.383 68.421 0.00 0.00 0.00 4.45
93 95 3.080121 CTTGCTCGCCCTCTCCCT 61.080 66.667 0.00 0.00 0.00 4.20
97 99 4.443266 GTCGCTTGCTCGCCCTCT 62.443 66.667 0.00 0.00 0.00 3.69
98 100 4.443266 AGTCGCTTGCTCGCCCTC 62.443 66.667 0.00 0.00 0.00 4.30
152 154 6.310467 GTCTTTTGTTTCCTCAACTTTTGTCC 59.690 38.462 0.00 0.00 36.21 4.02
228 234 2.969628 TCCCTTTTCTTCCATTTGGCA 58.030 42.857 0.00 0.00 34.44 4.92
239 245 3.166489 GTGATCGACGATCCCTTTTCT 57.834 47.619 29.72 0.00 38.20 2.52
300 306 6.293462 CGACTGAATCCTATGAATCGTGAGTA 60.293 42.308 0.00 0.00 0.00 2.59
309 315 3.104512 ACCCACGACTGAATCCTATGAA 58.895 45.455 0.00 0.00 0.00 2.57
319 325 0.037734 TAGCTCAGACCCACGACTGA 59.962 55.000 0.00 0.00 40.22 3.41
331 337 1.002033 GGAATTGGCGCATTAGCTCAG 60.002 52.381 10.83 0.00 39.10 3.35
385 1497 5.895636 TTTGCCACATACAGTAATCTTGG 57.104 39.130 0.00 0.00 0.00 3.61
407 1548 0.250124 TTTCTTGTCCACGCCGACAT 60.250 50.000 6.04 0.00 42.20 3.06
408 1549 0.878523 CTTTCTTGTCCACGCCGACA 60.879 55.000 0.00 1.24 40.98 4.35
772 1959 4.019950 TGATGAGATGCTTCCTCAGACAAA 60.020 41.667 0.00 0.00 43.07 2.83
773 1960 3.516700 TGATGAGATGCTTCCTCAGACAA 59.483 43.478 0.00 0.00 43.07 3.18
774 1961 3.102204 TGATGAGATGCTTCCTCAGACA 58.898 45.455 0.00 0.00 43.07 3.41
780 1967 1.134280 CCGGTTGATGAGATGCTTCCT 60.134 52.381 0.00 0.00 0.00 3.36
787 1974 2.505982 CCGGCCGGTTGATGAGAT 59.494 61.111 36.64 0.00 0.00 2.75
788 1975 4.467084 GCCGGCCGGTTGATGAGA 62.467 66.667 42.53 0.00 37.65 3.27
850 2050 1.926489 TTGGTACCCGCATTCCCCT 60.926 57.895 10.07 0.00 0.00 4.79
1021 2235 1.791103 CGATGAGGGAGAGCGAGGTC 61.791 65.000 0.00 0.00 0.00 3.85
1037 2266 1.434622 CTGATGCAGGAAAGCGCGAT 61.435 55.000 12.10 0.00 37.31 4.58
1053 2282 1.832167 GGGTTTTGTGCCTGCCTGA 60.832 57.895 0.00 0.00 0.00 3.86
1139 2368 2.143575 TTAAGGGGCGGCAATGGTGA 62.144 55.000 12.47 0.00 0.00 4.02
1141 2370 0.325203 ATTTAAGGGGCGGCAATGGT 60.325 50.000 12.47 0.00 0.00 3.55
1142 2371 1.698506 TATTTAAGGGGCGGCAATGG 58.301 50.000 12.47 0.00 0.00 3.16
1144 2373 2.525368 GGATATTTAAGGGGCGGCAAT 58.475 47.619 12.47 3.86 0.00 3.56
1166 2395 2.207229 GGGCTTGGGGTGGTGTTTC 61.207 63.158 0.00 0.00 0.00 2.78
1185 2414 1.201855 TGCGTTTTGCTTGCGTTTTTG 60.202 42.857 0.00 0.00 46.63 2.44
1233 2477 2.824489 ACCTCTCGATGCTCGCGA 60.824 61.111 9.26 9.26 40.21 5.87
1326 2595 2.434359 GGTTCTTGACGGCTCCGG 60.434 66.667 13.31 0.00 44.69 5.14
1383 2652 1.376424 CTGCTGTGGCCGTGAGAAT 60.376 57.895 0.00 0.00 37.74 2.40
1412 2681 4.035208 GGATGTATAAGTCCCAAAGTTGCG 59.965 45.833 0.00 0.00 0.00 4.85
1419 2688 2.035449 CGCGAGGATGTATAAGTCCCAA 59.965 50.000 0.00 0.00 35.00 4.12
1422 2691 4.698583 ATACGCGAGGATGTATAAGTCC 57.301 45.455 15.93 0.00 29.43 3.85
1440 2709 2.862674 TTCCCCCGCTGCGTGAATAC 62.863 60.000 21.59 0.00 0.00 1.89
1441 2710 2.661066 TTCCCCCGCTGCGTGAATA 61.661 57.895 21.59 0.19 0.00 1.75
1442 2711 4.028490 TTCCCCCGCTGCGTGAAT 62.028 61.111 21.59 0.00 0.00 2.57
1460 2729 0.380233 GCGAATATGCAACGACGACG 60.380 55.000 5.58 5.58 39.08 5.12
1461 2730 0.921347 AGCGAATATGCAACGACGAC 59.079 50.000 0.00 0.00 37.31 4.34
1462 2731 1.586578 GAAGCGAATATGCAACGACGA 59.413 47.619 0.00 0.00 37.31 4.20
1463 2732 1.650961 CGAAGCGAATATGCAACGACG 60.651 52.381 0.00 0.00 37.67 5.12
1464 2733 1.991825 CGAAGCGAATATGCAACGAC 58.008 50.000 0.00 0.00 37.67 4.34
1514 2809 5.184864 ACAGTCTCTAATCCAACTCTCTGTG 59.815 44.000 0.00 0.00 32.45 3.66
1561 2857 2.034221 GGAAGGCCGTTTGGAGCT 59.966 61.111 0.00 0.00 37.49 4.09
1600 2900 2.102633 CGAAACGAGTTAGCGCTCTAG 58.897 52.381 16.34 9.15 33.55 2.43
1601 2901 1.202110 CCGAAACGAGTTAGCGCTCTA 60.202 52.381 16.34 0.00 33.55 2.43
1602 2902 0.456312 CCGAAACGAGTTAGCGCTCT 60.456 55.000 16.34 5.50 33.55 4.09
1603 2903 0.731855 ACCGAAACGAGTTAGCGCTC 60.732 55.000 16.34 0.00 33.86 5.03
1604 2904 0.319297 AACCGAAACGAGTTAGCGCT 60.319 50.000 17.26 17.26 33.86 5.92
1605 2905 0.509929 AAACCGAAACGAGTTAGCGC 59.490 50.000 0.00 0.00 33.86 5.92
1606 2906 1.136446 CCAAACCGAAACGAGTTAGCG 60.136 52.381 0.00 4.80 37.29 4.26
1640 2940 9.710900 AAAGCATTTACAAGGAAAATAAAGGAG 57.289 29.630 0.00 0.00 35.86 3.69
1680 2996 5.701290 CAGTTTAGACAAGGGGAGTGTTTAG 59.299 44.000 0.00 0.00 0.00 1.85
1682 2998 4.165372 TCAGTTTAGACAAGGGGAGTGTTT 59.835 41.667 0.00 0.00 0.00 2.83
1683 2999 3.714798 TCAGTTTAGACAAGGGGAGTGTT 59.285 43.478 0.00 0.00 0.00 3.32
1684 3000 3.314693 TCAGTTTAGACAAGGGGAGTGT 58.685 45.455 0.00 0.00 0.00 3.55
1685 3001 4.256920 CATCAGTTTAGACAAGGGGAGTG 58.743 47.826 0.00 0.00 0.00 3.51
1686 3002 3.910627 ACATCAGTTTAGACAAGGGGAGT 59.089 43.478 0.00 0.00 0.00 3.85
1687 3003 4.559862 ACATCAGTTTAGACAAGGGGAG 57.440 45.455 0.00 0.00 0.00 4.30
1688 3004 4.993705 AACATCAGTTTAGACAAGGGGA 57.006 40.909 0.00 0.00 33.11 4.81
1698 3014 9.226606 CAATGGAACTAGGTAAACATCAGTTTA 57.773 33.333 0.00 0.00 45.71 2.01
1700 3016 6.151144 GCAATGGAACTAGGTAAACATCAGTT 59.849 38.462 0.00 0.00 40.40 3.16
1701 3017 5.648092 GCAATGGAACTAGGTAAACATCAGT 59.352 40.000 0.00 0.00 0.00 3.41
1713 3029 6.319658 AGTTTGACATATGGCAATGGAACTAG 59.680 38.462 24.42 0.00 43.55 2.57
1725 3041 6.374053 TGATGTGGTGTAAGTTTGACATATGG 59.626 38.462 7.80 0.00 0.00 2.74
1729 3045 6.489700 TCAATGATGTGGTGTAAGTTTGACAT 59.510 34.615 0.00 0.00 0.00 3.06
1731 3047 6.312399 TCAATGATGTGGTGTAAGTTTGAC 57.688 37.500 0.00 0.00 0.00 3.18
1759 3078 3.515602 AATGAAAGACCACTTGGCTCT 57.484 42.857 0.00 0.00 39.32 4.09
1764 3083 6.476706 GGAAACAAGAAATGAAAGACCACTTG 59.523 38.462 0.00 0.00 39.02 3.16
1851 3273 3.871485 AGAAAGAGAGCAAAGATCGCAT 58.129 40.909 0.00 0.00 0.00 4.73
1855 3277 7.319646 TGAGACTAAGAAAGAGAGCAAAGATC 58.680 38.462 0.00 0.00 0.00 2.75
1911 3333 5.526506 AATCAGGCAGCCAAGATTAAATC 57.473 39.130 23.58 0.00 31.89 2.17
1939 3361 3.679502 TCGTCATGTCATGCTGTTACTTG 59.320 43.478 8.03 0.00 0.00 3.16
2160 3590 5.337571 GGGAAGGAAAGCAAAGGGAAAATAG 60.338 44.000 0.00 0.00 0.00 1.73
2254 3684 5.517651 CTGTAATCAGCAAGCCACTTGGC 62.518 52.174 12.67 12.67 46.85 4.52
2279 3709 6.872628 AAAAGTACACCAGGTTTAGCTAAC 57.127 37.500 5.45 1.71 35.94 2.34
2303 3734 1.376424 CAGTGGCCACAAGCGATCT 60.376 57.895 36.39 11.61 45.17 2.75
2343 3774 6.594937 ACGTTGTCAAACACCTTTTTAGAGTA 59.405 34.615 0.00 0.00 35.94 2.59
2373 3909 7.836183 ACCAAGAATCAAGCCAATATAAAGACT 59.164 33.333 0.00 0.00 0.00 3.24
2438 3974 2.068519 TGCACGATACAGTGAAAGCTG 58.931 47.619 0.00 0.00 44.43 4.24
2529 4069 8.089597 TGCATACACTGAAATGAATGAACAAAT 58.910 29.630 0.00 0.00 0.00 2.32
2573 4116 7.812648 TCCGTTCATTGTTATAAGAGGTTTTG 58.187 34.615 0.00 0.00 0.00 2.44
2579 4122 7.843490 TTTCCTCCGTTCATTGTTATAAGAG 57.157 36.000 0.00 0.00 0.00 2.85
2590 4138 4.690122 CGGTAGTAATTTCCTCCGTTCAT 58.310 43.478 7.15 0.00 34.38 2.57
2610 4158 0.747255 AGCTGCATCTACCTACACGG 59.253 55.000 1.02 0.00 39.35 4.94
2616 4164 6.183347 ACAAAAATCTAAGCTGCATCTACCT 58.817 36.000 1.02 0.00 0.00 3.08
2617 4165 6.442513 ACAAAAATCTAAGCTGCATCTACC 57.557 37.500 1.02 0.00 0.00 3.18
2700 4254 4.562757 GGCCGCTTGGATCATATTAGTACA 60.563 45.833 0.00 0.00 33.02 2.90
2721 4277 6.970484 AGGTCGTGATTAATTTGATTATGGC 58.030 36.000 0.00 0.00 0.00 4.40
2743 4302 8.138928 TCACTATATCCATGACTAATTGGAGG 57.861 38.462 0.00 0.00 44.87 4.30
2771 4333 5.869888 ACTAATTGGAGATCTTGACGACAAC 59.130 40.000 0.00 0.00 32.27 3.32
2821 4386 4.060900 TCACAGAGACAGAAACTGCATTC 58.939 43.478 0.00 0.00 34.37 2.67
2838 4403 2.738314 TGCATCGACATCAAGTTCACAG 59.262 45.455 0.00 0.00 0.00 3.66
2874 4443 4.495679 GCGATTGTCACAAGTCAGAAAACA 60.496 41.667 0.00 0.00 0.00 2.83
2889 4458 0.935898 CCTCATCTGCTGCGATTGTC 59.064 55.000 4.63 0.00 0.00 3.18
2891 4460 1.647629 GCCTCATCTGCTGCGATTG 59.352 57.895 4.63 0.00 0.00 2.67
2892 4461 4.137879 GCCTCATCTGCTGCGATT 57.862 55.556 4.63 0.00 0.00 3.34
2895 4464 4.827087 ACCGCCTCATCTGCTGCG 62.827 66.667 0.00 0.00 46.14 5.18
3739 5314 4.735132 CGGCGTCCCTTGCTTCGA 62.735 66.667 0.00 0.00 0.00 3.71
3846 5421 2.783288 GCCGTCGGGGTAGAAGAGG 61.783 68.421 14.38 0.00 38.44 3.69
3921 5496 4.728102 CTTACCGTCCGCGTGGCA 62.728 66.667 11.05 0.00 36.15 4.92
3946 5525 1.961180 AATCTGGGAAGACGGAGCCG 61.961 60.000 7.48 7.48 46.03 5.52
3949 5528 1.472376 GCAGAATCTGGGAAGACGGAG 60.472 57.143 12.66 0.00 31.21 4.63
3959 5538 3.193157 CAACGAACTTGCAGAATCTGG 57.807 47.619 12.66 0.00 31.21 3.86
4020 5604 3.921677 TCGTAAAGAGTTAAGGCACCAG 58.078 45.455 0.00 0.00 0.00 4.00
4030 5614 1.612463 AGTGCCGTCTCGTAAAGAGTT 59.388 47.619 0.00 0.00 46.86 3.01
4031 5615 1.068472 CAGTGCCGTCTCGTAAAGAGT 60.068 52.381 0.00 0.00 46.86 3.24
4078 5662 4.987285 GCACGTCAGATTCATGTCTCATAT 59.013 41.667 0.00 0.00 0.00 1.78
4079 5663 4.363138 GCACGTCAGATTCATGTCTCATA 58.637 43.478 0.00 0.00 0.00 2.15
4080 5664 3.193263 GCACGTCAGATTCATGTCTCAT 58.807 45.455 0.00 0.00 0.00 2.90
4081 5665 2.610433 GCACGTCAGATTCATGTCTCA 58.390 47.619 0.00 0.00 0.00 3.27
4082 5666 1.929836 GGCACGTCAGATTCATGTCTC 59.070 52.381 0.00 0.00 0.00 3.36
4083 5667 1.552337 AGGCACGTCAGATTCATGTCT 59.448 47.619 0.00 0.00 0.00 3.41
4084 5668 1.662629 CAGGCACGTCAGATTCATGTC 59.337 52.381 0.00 0.00 0.00 3.06
4085 5669 1.676916 CCAGGCACGTCAGATTCATGT 60.677 52.381 0.00 0.00 0.00 3.21
4086 5670 1.012086 CCAGGCACGTCAGATTCATG 58.988 55.000 0.00 0.00 0.00 3.07
4087 5671 0.904649 TCCAGGCACGTCAGATTCAT 59.095 50.000 0.00 0.00 0.00 2.57
4088 5672 0.684535 TTCCAGGCACGTCAGATTCA 59.315 50.000 0.00 0.00 0.00 2.57
4089 5673 1.808411 TTTCCAGGCACGTCAGATTC 58.192 50.000 0.00 0.00 0.00 2.52
4090 5674 2.086869 CATTTCCAGGCACGTCAGATT 58.913 47.619 0.00 0.00 0.00 2.40
4091 5675 1.679944 CCATTTCCAGGCACGTCAGAT 60.680 52.381 0.00 0.00 0.00 2.90
4092 5676 0.321564 CCATTTCCAGGCACGTCAGA 60.322 55.000 0.00 0.00 0.00 3.27
4130 5714 1.159285 TGAGCGCCAAGAAGTGAATG 58.841 50.000 2.29 0.00 0.00 2.67
4169 5753 9.038072 AGTATATACTCTCAGGATAAGACGAGA 57.962 37.037 9.71 0.00 33.60 4.04
4243 5827 3.189702 GCTTTGGGTTTAACTACGATGCA 59.810 43.478 0.00 0.00 0.00 3.96
4289 5874 5.012046 TCACCTTCTGATCTGCTAGTGAAAA 59.988 40.000 12.58 0.00 30.56 2.29
4357 5955 0.744281 ACGTTGCTTGGGTGAAAAGG 59.256 50.000 0.00 0.00 0.00 3.11
4450 6048 4.452455 CCGAAATGACAAGAGTACAGCTTT 59.548 41.667 0.00 0.00 0.00 3.51
4451 6049 3.997021 CCGAAATGACAAGAGTACAGCTT 59.003 43.478 0.00 0.00 0.00 3.74
4455 6053 3.325870 CTGCCGAAATGACAAGAGTACA 58.674 45.455 0.00 0.00 0.00 2.90
4456 6054 2.094417 GCTGCCGAAATGACAAGAGTAC 59.906 50.000 0.00 0.00 0.00 2.73
4591 6241 9.874205 CTAGAATGAATCAAGAGGAATCCTATC 57.126 37.037 0.00 0.00 31.76 2.08
4698 6348 3.637998 TCACGAGAAGAACAGTACACC 57.362 47.619 0.00 0.00 0.00 4.16
4720 6370 2.685388 GTTGGAGATGCCTTTAGGAAGC 59.315 50.000 0.00 0.00 37.39 3.86
4725 6375 1.927174 CGTCGTTGGAGATGCCTTTAG 59.073 52.381 0.00 0.00 37.63 1.85
4730 6380 1.810030 GGTCGTCGTTGGAGATGCC 60.810 63.158 0.00 0.00 37.10 4.40
4743 6393 0.321653 GTGCCTGATTTGAGGGTCGT 60.322 55.000 0.00 0.00 33.17 4.34
4757 6407 3.321648 TGCAGACGGATGGTGCCT 61.322 61.111 0.00 0.00 36.31 4.75
4759 6409 2.358615 TGTGCAGACGGATGGTGC 60.359 61.111 0.00 0.00 37.73 5.01
4762 6412 0.603707 ACAAGTGTGCAGACGGATGG 60.604 55.000 8.52 0.56 0.00 3.51
4765 6415 1.069090 GGACAAGTGTGCAGACGGA 59.931 57.895 8.52 0.00 36.33 4.69
4766 6416 2.310233 CGGACAAGTGTGCAGACGG 61.310 63.158 8.52 7.70 36.05 4.79
4767 6417 2.310233 CCGGACAAGTGTGCAGACG 61.310 63.158 8.52 0.00 36.05 4.18
4768 6418 1.069090 TCCGGACAAGTGTGCAGAC 59.931 57.895 5.72 5.72 36.05 3.51
4769 6419 1.069090 GTCCGGACAAGTGTGCAGA 59.931 57.895 29.75 0.00 36.05 4.26
4770 6420 0.603707 ATGTCCGGACAAGTGTGCAG 60.604 55.000 39.04 0.00 45.41 4.41
4772 6422 1.577328 CCATGTCCGGACAAGTGTGC 61.577 60.000 39.04 9.57 45.41 4.57
4773 6423 0.955428 CCCATGTCCGGACAAGTGTG 60.955 60.000 39.04 30.30 45.41 3.82
4774 6424 1.374947 CCCATGTCCGGACAAGTGT 59.625 57.895 39.04 21.64 45.41 3.55
4775 6425 0.673644 GACCCATGTCCGGACAAGTG 60.674 60.000 39.04 31.33 45.41 3.16
4776 6426 1.677552 GACCCATGTCCGGACAAGT 59.322 57.895 39.04 32.89 45.41 3.16
4777 6427 4.617875 GACCCATGTCCGGACAAG 57.382 61.111 39.04 33.57 45.41 3.16
4789 6439 2.446994 AACCACTGTCCGGACCCA 60.447 61.111 31.19 13.44 0.00 4.51
4801 6451 1.448497 TGGTTGACTCCGGAACCAC 59.552 57.895 19.69 11.64 45.37 4.16
4804 6454 2.178912 TTGATGGTTGACTCCGGAAC 57.821 50.000 5.23 0.00 0.00 3.62
4806 6456 2.370519 TCTTTTGATGGTTGACTCCGGA 59.629 45.455 2.93 2.93 0.00 5.14
4808 6458 5.419542 TCTATCTTTTGATGGTTGACTCCG 58.580 41.667 0.00 0.00 39.88 4.63
4822 6472 4.250464 TCGGACGTTTGCATCTATCTTTT 58.750 39.130 0.00 0.00 0.00 2.27
4827 6477 3.123804 GTGATCGGACGTTTGCATCTAT 58.876 45.455 0.00 0.00 0.00 1.98
4831 6481 1.737838 ATGTGATCGGACGTTTGCAT 58.262 45.000 0.00 0.00 0.00 3.96
4988 6643 6.435292 TCTTTTGGACTAGGTTAGAAAGCT 57.565 37.500 0.00 0.00 42.74 3.74
5005 6661 3.676091 GGCAACCGACGATCTTTTG 57.324 52.632 0.00 0.00 0.00 2.44
5076 6733 2.943978 CGGGGCTCACGACTTTCCT 61.944 63.158 0.00 0.00 0.00 3.36
5080 6737 3.883744 CTTGCGGGGCTCACGACTT 62.884 63.158 0.75 0.00 0.00 3.01
5081 6738 4.379243 CTTGCGGGGCTCACGACT 62.379 66.667 0.75 0.00 0.00 4.18
5083 6740 1.609635 TAATCTTGCGGGGCTCACGA 61.610 55.000 0.75 0.00 0.00 4.35
5085 6742 0.733150 GTTAATCTTGCGGGGCTCAC 59.267 55.000 0.00 0.00 0.00 3.51
5095 6752 3.627577 CCATCCCGTGAAGGTTAATCTTG 59.372 47.826 5.50 0.00 38.74 3.02
5101 6758 1.557832 CTTCCCATCCCGTGAAGGTTA 59.442 52.381 0.00 0.00 38.74 2.85
5104 6761 0.179000 CTCTTCCCATCCCGTGAAGG 59.821 60.000 0.00 0.00 36.88 3.46
5115 6773 2.058595 GCGGAGGCTACTCTTCCCA 61.059 63.158 0.00 0.00 43.46 4.37
5139 6797 1.089481 CGATTAGCTTGCCCGCTTCA 61.089 55.000 0.00 0.00 41.30 3.02
5240 6910 4.980805 TGTCGGGCCGCACAACTC 62.981 66.667 23.83 5.75 0.00 3.01
5241 6912 4.555709 TTGTCGGGCCGCACAACT 62.556 61.111 27.97 0.00 0.00 3.16
5306 6978 4.378978 CCGATAGTGAGGAAGATTAGAGCG 60.379 50.000 0.00 0.00 0.00 5.03
5308 6980 4.378978 CGCCGATAGTGAGGAAGATTAGAG 60.379 50.000 0.00 0.00 0.00 2.43
5313 6985 0.962489 CCGCCGATAGTGAGGAAGAT 59.038 55.000 0.00 0.00 0.00 2.40
5333 7005 2.910479 TCGACACGTCCACAGCCT 60.910 61.111 0.00 0.00 0.00 4.58
5337 7009 2.900167 CGAGGTCGACACGTCCACA 61.900 63.158 18.91 0.00 43.02 4.17
5357 7029 4.063967 CGCCCTGCTACCACGACA 62.064 66.667 0.00 0.00 0.00 4.35
5397 7069 2.638556 ATTTGACGAGACACCGAGAG 57.361 50.000 0.00 0.00 0.00 3.20
5402 7075 2.289444 TGGAGGAATTTGACGAGACACC 60.289 50.000 0.00 0.00 0.00 4.16
5408 7081 3.000041 CGATTGTGGAGGAATTTGACGA 59.000 45.455 0.00 0.00 0.00 4.20
5409 7082 2.742053 ACGATTGTGGAGGAATTTGACG 59.258 45.455 0.00 0.00 0.00 4.35
5423 7096 0.525668 GCGGAGATCGACACGATTGT 60.526 55.000 8.01 0.00 47.00 2.71
5425 7098 1.298413 CGCGGAGATCGACACGATT 60.298 57.895 0.00 0.00 47.00 3.34
5427 7101 2.392974 TTCGCGGAGATCGACACGA 61.393 57.895 6.13 0.00 42.43 4.35
5466 7140 1.050988 ATGGCAGCTCCGTGTCCTAT 61.051 55.000 0.00 0.00 37.80 2.57
5508 7182 2.203252 TCCTATCGTACCGCGCCT 60.203 61.111 0.00 0.00 41.07 5.52
5521 7195 2.780595 GCAAAAGGCGATGCTCCTA 58.219 52.632 5.19 0.00 39.46 2.94
5536 7210 2.212812 TGGCATACATGGACAAGCAA 57.787 45.000 0.00 0.00 0.00 3.91
5550 7224 1.250328 CATTACGGGCATCATGGCAT 58.750 50.000 14.11 2.88 45.76 4.40
5551 7225 0.822944 CCATTACGGGCATCATGGCA 60.823 55.000 14.11 0.00 45.76 4.92
5562 7236 1.750778 AGGAGCAAATTGCCATTACGG 59.249 47.619 15.04 0.00 46.52 4.02
5563 7237 2.223572 GGAGGAGCAAATTGCCATTACG 60.224 50.000 15.04 0.00 46.52 3.18
5591 7265 1.374343 CGCCTCGTCACCTAGCACTA 61.374 60.000 0.00 0.00 0.00 2.74
5592 7266 2.701780 CGCCTCGTCACCTAGCACT 61.702 63.158 0.00 0.00 0.00 4.40
5600 7274 1.389106 GTACAACATTCGCCTCGTCAC 59.611 52.381 0.00 0.00 0.00 3.67
5601 7275 1.670674 GGTACAACATTCGCCTCGTCA 60.671 52.381 0.00 0.00 0.00 4.35
5604 7278 1.278238 GAGGTACAACATTCGCCTCG 58.722 55.000 0.00 0.00 36.74 4.63
5611 7285 1.338769 GCCGACCAGAGGTACAACATT 60.339 52.381 0.00 0.00 35.25 2.71
5613 7287 1.116536 TGCCGACCAGAGGTACAACA 61.117 55.000 0.00 0.00 35.25 3.33
5647 7321 3.270027 CTGGATTTGACTCCATTACGCA 58.730 45.455 0.00 0.00 44.23 5.24
5648 7322 2.032178 GCTGGATTTGACTCCATTACGC 59.968 50.000 0.00 0.00 44.23 4.42
5649 7323 3.270027 TGCTGGATTTGACTCCATTACG 58.730 45.455 0.00 0.00 44.23 3.18
5650 7324 4.517285 TCTGCTGGATTTGACTCCATTAC 58.483 43.478 0.00 0.00 44.23 1.89
5651 7325 4.842531 TCTGCTGGATTTGACTCCATTA 57.157 40.909 0.00 0.00 44.23 1.90
5652 7326 3.726557 TCTGCTGGATTTGACTCCATT 57.273 42.857 0.00 0.00 44.23 3.16
5653 7327 3.458857 AGATCTGCTGGATTTGACTCCAT 59.541 43.478 0.00 0.00 44.23 3.41
5654 7328 2.842496 AGATCTGCTGGATTTGACTCCA 59.158 45.455 0.00 0.00 43.09 3.86
5655 7329 3.465871 GAGATCTGCTGGATTTGACTCC 58.534 50.000 0.00 0.00 34.33 3.85
5656 7330 3.122297 CGAGATCTGCTGGATTTGACTC 58.878 50.000 0.00 0.00 34.33 3.36
5657 7331 2.762887 TCGAGATCTGCTGGATTTGACT 59.237 45.455 0.00 0.00 34.33 3.41
5658 7332 3.122297 CTCGAGATCTGCTGGATTTGAC 58.878 50.000 6.58 0.00 34.33 3.18
5659 7333 2.762887 ACTCGAGATCTGCTGGATTTGA 59.237 45.455 21.68 0.00 34.33 2.69
5660 7334 2.864946 CACTCGAGATCTGCTGGATTTG 59.135 50.000 21.68 0.00 34.33 2.32
5661 7335 2.158986 CCACTCGAGATCTGCTGGATTT 60.159 50.000 21.68 0.00 34.33 2.17
5662 7336 1.411977 CCACTCGAGATCTGCTGGATT 59.588 52.381 21.68 0.00 34.33 3.01
5663 7337 1.039068 CCACTCGAGATCTGCTGGAT 58.961 55.000 21.68 0.00 37.37 3.41
5664 7338 1.039785 CCCACTCGAGATCTGCTGGA 61.040 60.000 21.68 0.00 0.00 3.86
5665 7339 1.440893 CCCACTCGAGATCTGCTGG 59.559 63.158 21.68 14.79 0.00 4.85
5666 7340 1.440893 CCCCACTCGAGATCTGCTG 59.559 63.158 21.68 5.38 0.00 4.41
5667 7341 1.760086 CCCCCACTCGAGATCTGCT 60.760 63.158 21.68 0.00 0.00 4.24
5668 7342 1.617947 AACCCCCACTCGAGATCTGC 61.618 60.000 21.68 0.00 0.00 4.26
5669 7343 1.409427 GTAACCCCCACTCGAGATCTG 59.591 57.143 21.68 7.02 0.00 2.90
5670 7344 1.777941 GTAACCCCCACTCGAGATCT 58.222 55.000 21.68 0.00 0.00 2.75
5671 7345 0.384669 CGTAACCCCCACTCGAGATC 59.615 60.000 21.68 0.00 0.00 2.75
5672 7346 0.324091 ACGTAACCCCCACTCGAGAT 60.324 55.000 21.68 0.00 0.00 2.75
5673 7347 1.075482 ACGTAACCCCCACTCGAGA 59.925 57.895 21.68 0.00 0.00 4.04
5674 7348 1.214589 CACGTAACCCCCACTCGAG 59.785 63.158 11.84 11.84 0.00 4.04
5675 7349 2.934570 GCACGTAACCCCCACTCGA 61.935 63.158 0.00 0.00 0.00 4.04
5676 7350 2.433664 GCACGTAACCCCCACTCG 60.434 66.667 0.00 0.00 0.00 4.18
5677 7351 1.375523 CAGCACGTAACCCCCACTC 60.376 63.158 0.00 0.00 0.00 3.51
5678 7352 1.198759 ATCAGCACGTAACCCCCACT 61.199 55.000 0.00 0.00 0.00 4.00
5679 7353 0.538118 TATCAGCACGTAACCCCCAC 59.462 55.000 0.00 0.00 0.00 4.61
5680 7354 0.828022 CTATCAGCACGTAACCCCCA 59.172 55.000 0.00 0.00 0.00 4.96
5681 7355 0.828677 ACTATCAGCACGTAACCCCC 59.171 55.000 0.00 0.00 0.00 5.40
5682 7356 1.755380 AGACTATCAGCACGTAACCCC 59.245 52.381 0.00 0.00 0.00 4.95
5683 7357 3.187700 CAAGACTATCAGCACGTAACCC 58.812 50.000 0.00 0.00 0.00 4.11
5684 7358 3.187700 CCAAGACTATCAGCACGTAACC 58.812 50.000 0.00 0.00 0.00 2.85
5685 7359 2.603560 GCCAAGACTATCAGCACGTAAC 59.396 50.000 0.00 0.00 0.00 2.50
5686 7360 2.232696 TGCCAAGACTATCAGCACGTAA 59.767 45.455 0.00 0.00 0.00 3.18
5687 7361 1.822371 TGCCAAGACTATCAGCACGTA 59.178 47.619 0.00 0.00 0.00 3.57
5688 7362 0.608130 TGCCAAGACTATCAGCACGT 59.392 50.000 0.00 0.00 0.00 4.49
5689 7363 1.002366 GTGCCAAGACTATCAGCACG 58.998 55.000 0.00 0.00 43.70 5.34
5691 7365 0.894835 TCGTGCCAAGACTATCAGCA 59.105 50.000 0.00 0.00 0.00 4.41
5692 7366 1.863454 CATCGTGCCAAGACTATCAGC 59.137 52.381 0.00 0.00 0.00 4.26
5693 7367 2.159043 ACCATCGTGCCAAGACTATCAG 60.159 50.000 0.00 0.00 0.00 2.90
5694 7368 1.831106 ACCATCGTGCCAAGACTATCA 59.169 47.619 0.00 0.00 0.00 2.15
5695 7369 2.604046 ACCATCGTGCCAAGACTATC 57.396 50.000 0.00 0.00 0.00 2.08
5696 7370 3.196901 TGTTACCATCGTGCCAAGACTAT 59.803 43.478 0.00 0.00 0.00 2.12
5697 7371 2.563620 TGTTACCATCGTGCCAAGACTA 59.436 45.455 0.00 0.00 0.00 2.59
5698 7372 1.346395 TGTTACCATCGTGCCAAGACT 59.654 47.619 0.00 0.00 0.00 3.24
5699 7373 1.732259 CTGTTACCATCGTGCCAAGAC 59.268 52.381 0.00 0.00 0.00 3.01
5700 7374 1.338674 CCTGTTACCATCGTGCCAAGA 60.339 52.381 0.00 0.00 0.00 3.02
5701 7375 1.086696 CCTGTTACCATCGTGCCAAG 58.913 55.000 0.00 0.00 0.00 3.61
5702 7376 0.687920 TCCTGTTACCATCGTGCCAA 59.312 50.000 0.00 0.00 0.00 4.52
5703 7377 0.687920 TTCCTGTTACCATCGTGCCA 59.312 50.000 0.00 0.00 0.00 4.92
5704 7378 1.084289 GTTCCTGTTACCATCGTGCC 58.916 55.000 0.00 0.00 0.00 5.01
5705 7379 1.803334 TGTTCCTGTTACCATCGTGC 58.197 50.000 0.00 0.00 0.00 5.34
5706 7380 5.356426 TCATATGTTCCTGTTACCATCGTG 58.644 41.667 1.90 0.00 0.00 4.35
5707 7381 5.128827 ACTCATATGTTCCTGTTACCATCGT 59.871 40.000 1.90 0.00 0.00 3.73
5708 7382 5.601662 ACTCATATGTTCCTGTTACCATCG 58.398 41.667 1.90 0.00 0.00 3.84
5709 7383 7.865706 AAACTCATATGTTCCTGTTACCATC 57.134 36.000 1.90 0.00 0.00 3.51
5710 7384 8.548877 AGTAAACTCATATGTTCCTGTTACCAT 58.451 33.333 1.90 0.00 0.00 3.55
5711 7385 7.822334 CAGTAAACTCATATGTTCCTGTTACCA 59.178 37.037 1.90 0.00 30.72 3.25
5712 7386 7.822822 ACAGTAAACTCATATGTTCCTGTTACC 59.177 37.037 1.90 0.00 38.08 2.85
5713 7387 8.773404 ACAGTAAACTCATATGTTCCTGTTAC 57.227 34.615 1.90 4.94 38.08 2.50
5715 7389 9.216117 GTTACAGTAAACTCATATGTTCCTGTT 57.784 33.333 7.70 3.01 39.93 3.16
5716 7390 8.372459 TGTTACAGTAAACTCATATGTTCCTGT 58.628 33.333 1.90 5.47 41.07 4.00
5717 7391 8.656849 GTGTTACAGTAAACTCATATGTTCCTG 58.343 37.037 1.90 0.00 36.13 3.86
5718 7392 7.822822 GGTGTTACAGTAAACTCATATGTTCCT 59.177 37.037 1.90 0.00 0.00 3.36
5719 7393 7.604927 TGGTGTTACAGTAAACTCATATGTTCC 59.395 37.037 1.90 0.00 0.00 3.62
5720 7394 8.542497 TGGTGTTACAGTAAACTCATATGTTC 57.458 34.615 1.90 0.00 0.00 3.18
5721 7395 8.946085 CATGGTGTTACAGTAAACTCATATGTT 58.054 33.333 1.90 0.00 0.00 2.71
5722 7396 8.318412 TCATGGTGTTACAGTAAACTCATATGT 58.682 33.333 1.90 0.00 0.00 2.29
5723 7397 8.716646 TCATGGTGTTACAGTAAACTCATATG 57.283 34.615 0.00 0.00 0.00 1.78
5724 7398 9.905713 AATCATGGTGTTACAGTAAACTCATAT 57.094 29.630 0.00 0.00 0.00 1.78
5725 7399 9.733556 AAATCATGGTGTTACAGTAAACTCATA 57.266 29.630 0.00 0.00 0.00 2.15
5726 7400 8.635765 AAATCATGGTGTTACAGTAAACTCAT 57.364 30.769 0.00 0.00 0.00 2.90
5727 7401 8.458573 AAAATCATGGTGTTACAGTAAACTCA 57.541 30.769 0.00 0.00 0.00 3.41
5728 7402 9.180678 CAAAAATCATGGTGTTACAGTAAACTC 57.819 33.333 0.00 0.00 0.00 3.01
5729 7403 8.141268 CCAAAAATCATGGTGTTACAGTAAACT 58.859 33.333 0.00 0.00 33.08 2.66
5730 7404 7.095816 GCCAAAAATCATGGTGTTACAGTAAAC 60.096 37.037 0.00 0.00 40.23 2.01
5731 7405 6.926272 GCCAAAAATCATGGTGTTACAGTAAA 59.074 34.615 0.00 0.00 40.23 2.01
5732 7406 6.451393 GCCAAAAATCATGGTGTTACAGTAA 58.549 36.000 0.00 0.00 40.23 2.24
5733 7407 5.047660 GGCCAAAAATCATGGTGTTACAGTA 60.048 40.000 0.00 0.00 40.23 2.74
5734 7408 4.262420 GGCCAAAAATCATGGTGTTACAGT 60.262 41.667 0.00 0.00 40.23 3.55
5735 7409 4.021192 AGGCCAAAAATCATGGTGTTACAG 60.021 41.667 5.01 0.00 40.23 2.74
5736 7410 3.900601 AGGCCAAAAATCATGGTGTTACA 59.099 39.130 5.01 0.00 40.23 2.41
5737 7411 4.535526 AGGCCAAAAATCATGGTGTTAC 57.464 40.909 5.01 0.00 40.23 2.50
5738 7412 5.559148 AAAGGCCAAAAATCATGGTGTTA 57.441 34.783 5.01 0.00 40.23 2.41
5739 7413 4.436113 AAAGGCCAAAAATCATGGTGTT 57.564 36.364 5.01 0.00 40.23 3.32
5740 7414 4.436113 AAAAGGCCAAAAATCATGGTGT 57.564 36.364 5.01 0.00 40.23 4.16
5741 7415 5.065235 AGAAAAAGGCCAAAAATCATGGTG 58.935 37.500 5.01 0.00 40.23 4.17
5742 7416 5.308976 AGAAAAAGGCCAAAAATCATGGT 57.691 34.783 5.01 0.00 40.23 3.55
5743 7417 6.638096 AAAGAAAAAGGCCAAAAATCATGG 57.362 33.333 5.01 0.00 41.08 3.66
5744 7418 7.648908 GGAAAAAGAAAAAGGCCAAAAATCATG 59.351 33.333 5.01 0.00 0.00 3.07
5745 7419 7.341512 TGGAAAAAGAAAAAGGCCAAAAATCAT 59.658 29.630 5.01 0.00 0.00 2.45
5746 7420 6.660949 TGGAAAAAGAAAAAGGCCAAAAATCA 59.339 30.769 5.01 0.00 0.00 2.57
5747 7421 7.094508 TGGAAAAAGAAAAAGGCCAAAAATC 57.905 32.000 5.01 0.00 0.00 2.17
5748 7422 7.473735 TTGGAAAAAGAAAAAGGCCAAAAAT 57.526 28.000 5.01 0.00 31.60 1.82
5749 7423 6.901081 TTGGAAAAAGAAAAAGGCCAAAAA 57.099 29.167 5.01 0.00 31.60 1.94
5750 7424 6.717084 TCTTTGGAAAAAGAAAAAGGCCAAAA 59.283 30.769 5.01 0.00 41.64 2.44
5751 7425 6.241645 TCTTTGGAAAAAGAAAAAGGCCAAA 58.758 32.000 5.01 0.00 40.44 3.28
5752 7426 5.810095 TCTTTGGAAAAAGAAAAAGGCCAA 58.190 33.333 5.01 0.00 35.99 4.52
5753 7427 5.428184 TCTTTGGAAAAAGAAAAAGGCCA 57.572 34.783 5.01 0.00 35.99 5.36
5754 7428 6.291377 AGATCTTTGGAAAAAGAAAAAGGCC 58.709 36.000 0.00 0.00 41.57 5.19
5755 7429 7.792374 AAGATCTTTGGAAAAAGAAAAAGGC 57.208 32.000 0.88 0.00 41.57 4.35
5756 7430 9.992910 CAAAAGATCTTTGGAAAAAGAAAAAGG 57.007 29.630 21.15 0.00 41.57 3.11
5786 7460 7.704047 GCAAATCCAAAGCCAATTTGTTAAAAA 59.296 29.630 8.36 0.00 45.78 1.94
5787 7461 7.067981 AGCAAATCCAAAGCCAATTTGTTAAAA 59.932 29.630 8.36 0.00 45.78 1.52
5788 7462 6.545298 AGCAAATCCAAAGCCAATTTGTTAAA 59.455 30.769 8.36 0.00 45.78 1.52
5789 7463 6.060788 AGCAAATCCAAAGCCAATTTGTTAA 58.939 32.000 8.36 0.00 45.78 2.01
5790 7464 5.619220 AGCAAATCCAAAGCCAATTTGTTA 58.381 33.333 8.36 0.00 45.78 2.41
5791 7465 4.463070 AGCAAATCCAAAGCCAATTTGTT 58.537 34.783 8.36 0.98 45.78 2.83
5792 7466 4.089408 AGCAAATCCAAAGCCAATTTGT 57.911 36.364 8.36 0.00 45.78 2.83
5793 7467 5.441709 AAAGCAAATCCAAAGCCAATTTG 57.558 34.783 0.00 0.00 46.62 2.32
5794 7468 6.096564 TCAAAAAGCAAATCCAAAGCCAATTT 59.903 30.769 0.00 0.00 0.00 1.82
5795 7469 5.593502 TCAAAAAGCAAATCCAAAGCCAATT 59.406 32.000 0.00 0.00 0.00 2.32
5796 7470 5.131784 TCAAAAAGCAAATCCAAAGCCAAT 58.868 33.333 0.00 0.00 0.00 3.16
5797 7471 4.521146 TCAAAAAGCAAATCCAAAGCCAA 58.479 34.783 0.00 0.00 0.00 4.52
5798 7472 4.148128 TCAAAAAGCAAATCCAAAGCCA 57.852 36.364 0.00 0.00 0.00 4.75
5799 7473 5.454520 CATTCAAAAAGCAAATCCAAAGCC 58.545 37.500 0.00 0.00 0.00 4.35
5800 7474 5.454520 CCATTCAAAAAGCAAATCCAAAGC 58.545 37.500 0.00 0.00 0.00 3.51
5801 7475 5.239963 AGCCATTCAAAAAGCAAATCCAAAG 59.760 36.000 0.00 0.00 0.00 2.77
5802 7476 5.131784 AGCCATTCAAAAAGCAAATCCAAA 58.868 33.333 0.00 0.00 0.00 3.28
5803 7477 4.716794 AGCCATTCAAAAAGCAAATCCAA 58.283 34.783 0.00 0.00 0.00 3.53
5804 7478 4.317488 GAGCCATTCAAAAAGCAAATCCA 58.683 39.130 0.00 0.00 0.00 3.41
5805 7479 3.686241 GGAGCCATTCAAAAAGCAAATCC 59.314 43.478 0.00 0.00 0.00 3.01
5806 7480 4.317488 TGGAGCCATTCAAAAAGCAAATC 58.683 39.130 0.00 0.00 0.00 2.17
5807 7481 4.354893 TGGAGCCATTCAAAAAGCAAAT 57.645 36.364 0.00 0.00 0.00 2.32
5808 7482 3.834489 TGGAGCCATTCAAAAAGCAAA 57.166 38.095 0.00 0.00 0.00 3.68
5809 7483 3.557475 CCATGGAGCCATTCAAAAAGCAA 60.557 43.478 5.56 0.00 33.90 3.91
5810 7484 2.027929 CCATGGAGCCATTCAAAAAGCA 60.028 45.455 5.56 0.00 33.90 3.91
5811 7485 2.234414 TCCATGGAGCCATTCAAAAAGC 59.766 45.455 11.44 0.00 33.90 3.51
5812 7486 3.512724 AGTCCATGGAGCCATTCAAAAAG 59.487 43.478 16.81 0.00 33.90 2.27
5813 7487 3.509442 AGTCCATGGAGCCATTCAAAAA 58.491 40.909 16.81 0.00 33.90 1.94
5814 7488 3.091545 GAGTCCATGGAGCCATTCAAAA 58.908 45.455 16.81 0.00 33.90 2.44
5815 7489 2.041485 TGAGTCCATGGAGCCATTCAAA 59.959 45.455 16.81 0.00 33.90 2.69
5816 7490 1.634973 TGAGTCCATGGAGCCATTCAA 59.365 47.619 16.81 0.00 33.90 2.69
5817 7491 1.288188 TGAGTCCATGGAGCCATTCA 58.712 50.000 16.81 11.23 33.90 2.57
5818 7492 2.425143 TTGAGTCCATGGAGCCATTC 57.575 50.000 16.81 8.74 33.90 2.67
5819 7493 2.905415 TTTGAGTCCATGGAGCCATT 57.095 45.000 16.81 0.00 33.90 3.16
5820 7494 2.512896 AGATTTGAGTCCATGGAGCCAT 59.487 45.455 16.81 3.00 37.08 4.40
5821 7495 1.918262 AGATTTGAGTCCATGGAGCCA 59.082 47.619 16.81 13.29 0.00 4.75
5822 7496 2.686915 CAAGATTTGAGTCCATGGAGCC 59.313 50.000 16.81 10.56 0.00 4.70
5823 7497 2.686915 CCAAGATTTGAGTCCATGGAGC 59.313 50.000 16.81 11.25 30.90 4.70
5824 7498 3.054139 TCCCAAGATTTGAGTCCATGGAG 60.054 47.826 16.81 0.00 30.90 3.86
5825 7499 2.918934 TCCCAAGATTTGAGTCCATGGA 59.081 45.455 11.44 11.44 30.90 3.41
5826 7500 3.370840 TCCCAAGATTTGAGTCCATGG 57.629 47.619 4.97 4.97 0.00 3.66
5827 7501 5.009410 GCTATTCCCAAGATTTGAGTCCATG 59.991 44.000 0.00 0.00 0.00 3.66
5828 7502 5.103771 AGCTATTCCCAAGATTTGAGTCCAT 60.104 40.000 0.00 0.00 0.00 3.41
5829 7503 4.228210 AGCTATTCCCAAGATTTGAGTCCA 59.772 41.667 0.00 0.00 0.00 4.02
5830 7504 4.786425 AGCTATTCCCAAGATTTGAGTCC 58.214 43.478 0.00 0.00 0.00 3.85
5831 7505 6.457528 CGAAAGCTATTCCCAAGATTTGAGTC 60.458 42.308 0.00 0.00 33.01 3.36
5832 7506 5.355350 CGAAAGCTATTCCCAAGATTTGAGT 59.645 40.000 0.00 0.00 33.01 3.41
5833 7507 5.355350 ACGAAAGCTATTCCCAAGATTTGAG 59.645 40.000 0.00 0.00 33.01 3.02
5834 7508 5.253330 ACGAAAGCTATTCCCAAGATTTGA 58.747 37.500 0.00 0.00 33.01 2.69
5835 7509 5.567138 ACGAAAGCTATTCCCAAGATTTG 57.433 39.130 0.00 0.00 33.01 2.32
5836 7510 6.350194 GGAAACGAAAGCTATTCCCAAGATTT 60.350 38.462 0.00 0.00 36.32 2.17
5837 7511 5.125578 GGAAACGAAAGCTATTCCCAAGATT 59.874 40.000 0.00 0.00 36.32 2.40
5838 7512 4.640647 GGAAACGAAAGCTATTCCCAAGAT 59.359 41.667 0.00 0.00 36.32 2.40
5839 7513 4.007659 GGAAACGAAAGCTATTCCCAAGA 58.992 43.478 0.00 0.00 36.32 3.02
5840 7514 4.010349 AGGAAACGAAAGCTATTCCCAAG 58.990 43.478 10.00 0.00 40.48 3.61
5841 7515 4.028993 AGGAAACGAAAGCTATTCCCAA 57.971 40.909 10.00 0.00 40.48 4.12
5842 7516 3.713826 AGGAAACGAAAGCTATTCCCA 57.286 42.857 10.00 0.00 40.48 4.37
5843 7517 4.142447 GGAAAGGAAACGAAAGCTATTCCC 60.142 45.833 10.00 3.87 40.48 3.97
5844 7518 4.142447 GGGAAAGGAAACGAAAGCTATTCC 60.142 45.833 0.00 0.00 40.13 3.01
5845 7519 4.457949 TGGGAAAGGAAACGAAAGCTATTC 59.542 41.667 0.00 0.00 0.00 1.75
5846 7520 4.403734 TGGGAAAGGAAACGAAAGCTATT 58.596 39.130 0.00 0.00 0.00 1.73
5847 7521 4.028993 TGGGAAAGGAAACGAAAGCTAT 57.971 40.909 0.00 0.00 0.00 2.97
5848 7522 3.495434 TGGGAAAGGAAACGAAAGCTA 57.505 42.857 0.00 0.00 0.00 3.32
5849 7523 2.358322 TGGGAAAGGAAACGAAAGCT 57.642 45.000 0.00 0.00 0.00 3.74
5850 7524 2.361119 ACTTGGGAAAGGAAACGAAAGC 59.639 45.455 0.00 0.00 0.00 3.51
5851 7525 3.630312 TCACTTGGGAAAGGAAACGAAAG 59.370 43.478 0.00 0.00 0.00 2.62
5852 7526 3.622630 TCACTTGGGAAAGGAAACGAAA 58.377 40.909 0.00 0.00 0.00 3.46
5853 7527 3.284793 TCACTTGGGAAAGGAAACGAA 57.715 42.857 0.00 0.00 0.00 3.85
5854 7528 3.284793 TTCACTTGGGAAAGGAAACGA 57.715 42.857 0.00 0.00 0.00 3.85
5855 7529 4.584327 ATTTCACTTGGGAAAGGAAACG 57.416 40.909 4.35 0.00 39.88 3.60
5856 7530 7.227049 TCATATTTCACTTGGGAAAGGAAAC 57.773 36.000 4.35 0.00 39.88 2.78
5857 7531 7.039082 CCTTCATATTTCACTTGGGAAAGGAAA 60.039 37.037 4.35 0.00 39.88 3.13
5858 7532 6.437162 CCTTCATATTTCACTTGGGAAAGGAA 59.563 38.462 4.35 6.86 39.88 3.36
5859 7533 5.951747 CCTTCATATTTCACTTGGGAAAGGA 59.048 40.000 4.35 0.00 39.88 3.36
5860 7534 5.951747 TCCTTCATATTTCACTTGGGAAAGG 59.048 40.000 4.35 0.00 39.88 3.11
5861 7535 7.466746 TTCCTTCATATTTCACTTGGGAAAG 57.533 36.000 4.35 0.00 39.88 2.62
5862 7536 7.847711 TTTCCTTCATATTTCACTTGGGAAA 57.152 32.000 0.24 0.24 40.72 3.13
5863 7537 9.713684 ATATTTCCTTCATATTTCACTTGGGAA 57.286 29.630 0.00 0.00 0.00 3.97
5864 7538 9.135189 CATATTTCCTTCATATTTCACTTGGGA 57.865 33.333 0.00 0.00 0.00 4.37
5865 7539 7.869429 GCATATTTCCTTCATATTTCACTTGGG 59.131 37.037 0.00 0.00 0.00 4.12
5866 7540 7.869429 GGCATATTTCCTTCATATTTCACTTGG 59.131 37.037 0.00 0.00 0.00 3.61
5867 7541 7.869429 GGGCATATTTCCTTCATATTTCACTTG 59.131 37.037 0.00 0.00 0.00 3.16
5868 7542 7.786464 AGGGCATATTTCCTTCATATTTCACTT 59.214 33.333 0.00 0.00 0.00 3.16
5869 7543 7.300658 AGGGCATATTTCCTTCATATTTCACT 58.699 34.615 0.00 0.00 0.00 3.41
5870 7544 7.530426 AGGGCATATTTCCTTCATATTTCAC 57.470 36.000 0.00 0.00 0.00 3.18
5871 7545 8.668653 TCTAGGGCATATTTCCTTCATATTTCA 58.331 33.333 0.00 0.00 34.75 2.69
5872 7546 9.171877 CTCTAGGGCATATTTCCTTCATATTTC 57.828 37.037 0.00 0.00 34.75 2.17
5873 7547 8.112183 CCTCTAGGGCATATTTCCTTCATATTT 58.888 37.037 0.00 0.00 34.75 1.40
5874 7548 7.637511 CCTCTAGGGCATATTTCCTTCATATT 58.362 38.462 0.00 0.00 34.75 1.28
5875 7549 7.205515 CCTCTAGGGCATATTTCCTTCATAT 57.794 40.000 0.00 0.00 34.75 1.78
5876 7550 6.627087 CCTCTAGGGCATATTTCCTTCATA 57.373 41.667 0.00 0.00 34.75 2.15
5877 7551 5.511386 CCTCTAGGGCATATTTCCTTCAT 57.489 43.478 0.00 0.00 34.75 2.57
6113 7787 7.242079 GTCAAGTCAATCACATCATTCTTCTG 58.758 38.462 0.00 0.00 0.00 3.02
6173 7847 4.973396 TCATGAAGAAAGCAATAGCAACG 58.027 39.130 0.00 0.00 45.49 4.10
6196 7870 8.577296 TCTCATAGTTACAGGAACATGTATAGC 58.423 37.037 0.00 0.00 40.86 2.97
6582 8256 8.648557 TCTACAATGATCTTTATCGGTCAAAG 57.351 34.615 0.00 0.00 34.60 2.77
6793 8467 1.004862 AGAGACTCCTCGTCATGTCCA 59.995 52.381 0.00 0.00 45.32 4.02


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.