Multiple sequence alignment - TraesCS2B01G310100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G310100 chr2B 100.000 3174 0 0 1 3174 443149356 443146183 0.000000e+00 5862
1 TraesCS2B01G310100 chr2B 97.674 1978 17 6 405 2369 443223073 443225034 0.000000e+00 3371
2 TraesCS2B01G310100 chr2B 91.667 72 4 1 2370 2441 443225100 443225169 7.250000e-17 99
3 TraesCS2B01G310100 chr2D 93.360 2470 101 20 1 2453 373654637 373652214 0.000000e+00 3594
4 TraesCS2B01G310100 chr2D 93.871 2072 67 26 405 2446 373750013 373752054 0.000000e+00 3068
5 TraesCS2B01G310100 chr2D 85.714 245 24 6 1 243 72155603 72155838 6.800000e-62 248
6 TraesCS2B01G310100 chr2D 89.071 183 9 3 2647 2820 373428964 373428784 1.920000e-52 217
7 TraesCS2B01G310100 chr2D 87.037 108 11 2 265 369 376208253 376208360 5.560000e-23 119
8 TraesCS2B01G310100 chr2A 91.269 2096 98 41 406 2449 505080486 505078424 0.000000e+00 2778
9 TraesCS2B01G310100 chr2A 90.751 1838 101 31 583 2377 505208566 505210377 0.000000e+00 2388
10 TraesCS2B01G310100 chr2A 84.874 357 48 5 2821 3174 510821997 510822350 3.890000e-94 355
11 TraesCS2B01G310100 chr2A 84.211 247 29 6 1 245 61503310 61503548 6.850000e-57 231
12 TraesCS2B01G310100 chr2A 96.454 141 3 2 2681 2820 504717400 504717261 6.850000e-57 231
13 TraesCS2B01G310100 chr3A 84.722 360 41 14 2821 3174 545882185 545881834 6.520000e-92 348
14 TraesCS2B01G310100 chr3D 84.034 357 46 9 2821 3174 182319948 182319600 1.820000e-87 333
15 TraesCS2B01G310100 chr3D 76.439 556 112 15 1419 1963 566081016 566081563 1.860000e-72 283
16 TraesCS2B01G310100 chr3D 82.065 368 31 11 2817 3174 563442896 563443238 6.700000e-72 281
17 TraesCS2B01G310100 chr3D 80.460 348 53 13 2821 3157 463115307 463114964 5.260000e-63 252
18 TraesCS2B01G310100 chr7A 83.565 359 45 12 2822 3174 148505694 148505344 1.100000e-84 324
19 TraesCS2B01G310100 chr7A 79.564 367 60 10 2820 3174 227962672 227963035 6.800000e-62 248
20 TraesCS2B01G310100 chr1A 75.844 563 118 17 1412 1965 11555200 11555753 1.450000e-68 270
21 TraesCS2B01G310100 chr1D 75.401 561 124 12 1412 1965 9745218 9745771 3.140000e-65 259
22 TraesCS2B01G310100 chr1B 75.404 557 119 14 1418 1965 14138344 14138891 1.460000e-63 254
23 TraesCS2B01G310100 chr4D 80.403 347 50 15 2820 3154 11882100 11881760 6.800000e-62 248
24 TraesCS2B01G310100 chr6A 84.615 247 28 6 1 245 422776206 422775968 1.470000e-58 237
25 TraesCS2B01G310100 chr5A 84.400 250 29 5 1 248 559787597 559787356 1.470000e-58 237
26 TraesCS2B01G310100 chr5A 82.482 274 34 9 1 270 334341641 334341378 8.860000e-56 228
27 TraesCS2B01G310100 chr4B 83.333 270 32 8 1 266 421735282 421735022 1.470000e-58 237
28 TraesCS2B01G310100 chr7D 84.800 250 21 12 1 245 629631018 629631255 5.290000e-58 235
29 TraesCS2B01G310100 chr3B 84.030 263 23 13 1 256 64503866 64504116 5.290000e-58 235
30 TraesCS2B01G310100 chr4A 80.808 297 46 8 2820 3111 677933450 677933740 4.120000e-54 222
31 TraesCS2B01G310100 chr6B 85.366 164 13 8 3019 3174 626532718 626532558 3.280000e-35 159


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G310100 chr2B 443146183 443149356 3173 True 5862 5862 100.0000 1 3174 1 chr2B.!!$R1 3173
1 TraesCS2B01G310100 chr2B 443223073 443225169 2096 False 1735 3371 94.6705 405 2441 2 chr2B.!!$F1 2036
2 TraesCS2B01G310100 chr2D 373652214 373654637 2423 True 3594 3594 93.3600 1 2453 1 chr2D.!!$R2 2452
3 TraesCS2B01G310100 chr2D 373750013 373752054 2041 False 3068 3068 93.8710 405 2446 1 chr2D.!!$F2 2041
4 TraesCS2B01G310100 chr2A 505078424 505080486 2062 True 2778 2778 91.2690 406 2449 1 chr2A.!!$R2 2043
5 TraesCS2B01G310100 chr2A 505208566 505210377 1811 False 2388 2388 90.7510 583 2377 1 chr2A.!!$F2 1794
6 TraesCS2B01G310100 chr3D 566081016 566081563 547 False 283 283 76.4390 1419 1963 1 chr3D.!!$F2 544
7 TraesCS2B01G310100 chr1A 11555200 11555753 553 False 270 270 75.8440 1412 1965 1 chr1A.!!$F1 553
8 TraesCS2B01G310100 chr1D 9745218 9745771 553 False 259 259 75.4010 1412 1965 1 chr1D.!!$F1 553
9 TraesCS2B01G310100 chr1B 14138344 14138891 547 False 254 254 75.4040 1418 1965 1 chr1B.!!$F1 547

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
55 57 0.106149 CCGGTTACCCCTATGAGCAC 59.894 60.0 0.0 0.0 0.0 4.4 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2180 2268 4.393062 CACTTACGAAGGTGATGAAGCAAT 59.607 41.667 0.0 0.0 35.69 3.56 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
26 27 4.528206 ACTCATCCTATGAACTCACACACA 59.472 41.667 0.00 0.00 39.11 3.72
43 45 2.137523 CACACACACCTTACCGGTTAC 58.862 52.381 15.04 0.00 46.37 2.50
55 57 0.106149 CCGGTTACCCCTATGAGCAC 59.894 60.000 0.00 0.00 0.00 4.40
59 61 1.416772 GTTACCCCTATGAGCACCTCC 59.583 57.143 0.00 0.00 0.00 4.30
105 107 6.504954 CATCTTGAGATTTTACGAAGTCGTCG 60.505 42.308 10.05 6.63 43.55 5.12
122 124 0.807667 TCGGTAGACGCCTCGTAGTC 60.808 60.000 0.00 0.00 41.37 2.59
150 152 1.336609 ACGTCTTCTCCCACTAAACGC 60.337 52.381 0.00 0.00 32.25 4.84
160 162 2.417651 CCCACTAAACGCTTATCACCGA 60.418 50.000 0.00 0.00 0.00 4.69
215 217 3.615496 CACCACGATTTAAACTCTACCGG 59.385 47.826 0.00 0.00 0.00 5.28
216 218 3.192466 CCACGATTTAAACTCTACCGGG 58.808 50.000 6.32 0.00 0.00 5.73
217 219 3.368739 CCACGATTTAAACTCTACCGGGT 60.369 47.826 6.32 4.46 0.00 5.28
218 220 3.615496 CACGATTTAAACTCTACCGGGTG 59.385 47.826 10.66 0.00 0.00 4.61
219 221 3.511146 ACGATTTAAACTCTACCGGGTGA 59.489 43.478 10.66 1.90 0.00 4.02
220 222 4.110482 CGATTTAAACTCTACCGGGTGAG 58.890 47.826 19.95 19.95 36.47 3.51
221 223 3.967332 TTTAAACTCTACCGGGTGAGG 57.033 47.619 23.60 10.86 34.84 3.86
222 224 2.905415 TAAACTCTACCGGGTGAGGA 57.095 50.000 23.60 12.65 34.84 3.71
223 225 2.249309 AAACTCTACCGGGTGAGGAT 57.751 50.000 23.60 13.12 34.84 3.24
224 226 3.393426 AAACTCTACCGGGTGAGGATA 57.607 47.619 23.60 0.00 34.84 2.59
225 227 2.361643 ACTCTACCGGGTGAGGATAC 57.638 55.000 23.60 0.00 34.84 2.24
226 228 1.133544 ACTCTACCGGGTGAGGATACC 60.134 57.143 23.60 0.00 40.10 2.73
227 229 0.928505 TCTACCGGGTGAGGATACCA 59.071 55.000 10.66 0.00 42.69 3.25
228 230 1.038280 CTACCGGGTGAGGATACCAC 58.962 60.000 10.66 0.00 42.69 4.16
229 231 0.632835 TACCGGGTGAGGATACCACT 59.367 55.000 10.66 0.00 42.69 4.00
230 232 0.976073 ACCGGGTGAGGATACCACTG 60.976 60.000 6.32 0.00 42.69 3.66
231 233 0.976073 CCGGGTGAGGATACCACTGT 60.976 60.000 0.00 0.00 42.69 3.55
232 234 0.460311 CGGGTGAGGATACCACTGTC 59.540 60.000 0.00 0.00 42.69 3.51
233 235 0.831307 GGGTGAGGATACCACTGTCC 59.169 60.000 0.00 0.00 42.69 4.02
261 263 4.985413 ACCATCGCATCACAATTTAGTTG 58.015 39.130 0.00 0.00 43.64 3.16
267 269 4.615682 CGCATCACAATTTAGTTGCCAAGA 60.616 41.667 5.01 0.00 41.69 3.02
276 278 8.515414 ACAATTTAGTTGCCAAGAAATCTAGAC 58.485 33.333 0.00 0.00 41.69 2.59
318 320 5.438117 GCGTACTTTTTGTGTTAGGTCTTC 58.562 41.667 0.00 0.00 0.00 2.87
324 326 5.856126 TTTTGTGTTAGGTCTTCGCATAG 57.144 39.130 0.00 0.00 0.00 2.23
325 327 4.794278 TTGTGTTAGGTCTTCGCATAGA 57.206 40.909 0.00 0.00 0.00 1.98
350 352 2.303890 TCAGATGTCTGCACATTCTGGT 59.696 45.455 5.14 0.00 43.79 4.00
376 378 5.399301 CGTTAAAAATGTTGCACTCTCCTTG 59.601 40.000 0.00 0.00 0.00 3.61
378 380 5.343307 AAAAATGTTGCACTCTCCTTGTT 57.657 34.783 0.00 0.00 0.00 2.83
403 405 0.526524 GGTCTTCGATGACAGAGCGG 60.527 60.000 26.86 0.00 38.61 5.52
458 460 4.976116 GCAACATAACAACTTGACACCTTC 59.024 41.667 0.00 0.00 0.00 3.46
2194 2282 4.263462 TGAAGTGGTATTGCTTCATCACCT 60.263 41.667 3.24 0.00 44.01 4.00
2243 2331 0.943359 CTCGCTGCTGCTATGCTACC 60.943 60.000 14.03 0.00 36.97 3.18
2249 2340 3.434984 GCTGCTGCTATGCTACCTTATTC 59.565 47.826 8.53 0.00 36.03 1.75
2313 2418 1.189446 GATGTCGTGTCGTTGTGTGTC 59.811 52.381 0.00 0.00 0.00 3.67
2315 2420 0.993532 GTCGTGTCGTTGTGTGTCAA 59.006 50.000 0.00 0.00 0.00 3.18
2449 2626 8.816144 GTTTGTGATTTTCATGTTACATGTGTT 58.184 29.630 22.58 8.46 0.00 3.32
2450 2627 8.572828 TTGTGATTTTCATGTTACATGTGTTC 57.427 30.769 22.58 15.63 0.00 3.18
2451 2628 7.710896 TGTGATTTTCATGTTACATGTGTTCA 58.289 30.769 22.58 17.52 0.00 3.18
2452 2629 7.861872 TGTGATTTTCATGTTACATGTGTTCAG 59.138 33.333 22.58 0.00 0.00 3.02
2453 2630 7.862372 GTGATTTTCATGTTACATGTGTTCAGT 59.138 33.333 22.58 6.22 0.00 3.41
2454 2631 8.412456 TGATTTTCATGTTACATGTGTTCAGTT 58.588 29.630 22.58 3.85 0.00 3.16
2455 2632 7.984002 TTTTCATGTTACATGTGTTCAGTTG 57.016 32.000 22.58 2.02 0.00 3.16
2456 2633 6.934048 TTCATGTTACATGTGTTCAGTTGA 57.066 33.333 22.58 4.20 0.00 3.18
2457 2634 6.934048 TCATGTTACATGTGTTCAGTTGAA 57.066 33.333 22.58 0.00 0.00 2.69
2458 2635 7.509141 TCATGTTACATGTGTTCAGTTGAAT 57.491 32.000 22.58 0.00 36.33 2.57
2459 2636 7.584108 TCATGTTACATGTGTTCAGTTGAATC 58.416 34.615 22.58 0.00 36.33 2.52
2460 2637 6.934048 TGTTACATGTGTTCAGTTGAATCA 57.066 33.333 9.11 2.29 36.33 2.57
2461 2638 6.724263 TGTTACATGTGTTCAGTTGAATCAC 58.276 36.000 9.11 14.84 36.99 3.06
2462 2639 6.317391 TGTTACATGTGTTCAGTTGAATCACA 59.683 34.615 21.20 21.20 43.23 3.58
2463 2640 7.013178 TGTTACATGTGTTCAGTTGAATCACAT 59.987 33.333 22.70 22.70 45.79 3.21
2464 2641 6.005583 ACATGTGTTCAGTTGAATCACATC 57.994 37.500 24.09 5.88 44.67 3.06
2465 2642 5.048504 ACATGTGTTCAGTTGAATCACATCC 60.049 40.000 24.09 5.37 44.67 3.51
2466 2643 3.498018 TGTGTTCAGTTGAATCACATCCG 59.502 43.478 17.95 0.00 39.12 4.18
2467 2644 3.745975 GTGTTCAGTTGAATCACATCCGA 59.254 43.478 15.93 0.00 36.74 4.55
2468 2645 4.213270 GTGTTCAGTTGAATCACATCCGAA 59.787 41.667 15.93 0.00 36.74 4.30
2469 2646 4.819088 TGTTCAGTTGAATCACATCCGAAA 59.181 37.500 0.00 0.00 36.33 3.46
2470 2647 5.049474 TGTTCAGTTGAATCACATCCGAAAG 60.049 40.000 0.00 0.00 36.33 2.62
2471 2648 4.641396 TCAGTTGAATCACATCCGAAAGT 58.359 39.130 0.00 0.00 0.00 2.66
2472 2649 5.063204 TCAGTTGAATCACATCCGAAAGTT 58.937 37.500 0.00 0.00 0.00 2.66
2473 2650 5.179368 TCAGTTGAATCACATCCGAAAGTTC 59.821 40.000 0.00 0.00 0.00 3.01
2485 2662 1.588404 CGAAAGTTCGGACATGGATCG 59.412 52.381 5.53 0.00 46.30 3.69
2486 2663 1.327764 GAAAGTTCGGACATGGATCGC 59.672 52.381 0.00 0.00 0.00 4.58
2487 2664 0.462047 AAGTTCGGACATGGATCGCC 60.462 55.000 0.00 0.00 0.00 5.54
2497 2674 4.675404 GGATCGCCATCCTTACCG 57.325 61.111 2.64 0.00 45.06 4.02
2498 2675 1.746517 GGATCGCCATCCTTACCGT 59.253 57.895 2.64 0.00 45.06 4.83
2499 2676 0.600255 GGATCGCCATCCTTACCGTG 60.600 60.000 2.64 0.00 45.06 4.94
2500 2677 1.222115 GATCGCCATCCTTACCGTGC 61.222 60.000 0.00 0.00 0.00 5.34
2501 2678 2.660258 ATCGCCATCCTTACCGTGCC 62.660 60.000 0.00 0.00 0.00 5.01
2502 2679 2.590092 GCCATCCTTACCGTGCCT 59.410 61.111 0.00 0.00 0.00 4.75
2503 2680 1.077716 GCCATCCTTACCGTGCCTT 60.078 57.895 0.00 0.00 0.00 4.35
2504 2681 0.179468 GCCATCCTTACCGTGCCTTA 59.821 55.000 0.00 0.00 0.00 2.69
2505 2682 1.407712 GCCATCCTTACCGTGCCTTAA 60.408 52.381 0.00 0.00 0.00 1.85
2506 2683 2.942306 GCCATCCTTACCGTGCCTTAAA 60.942 50.000 0.00 0.00 0.00 1.52
2507 2684 3.349022 CCATCCTTACCGTGCCTTAAAA 58.651 45.455 0.00 0.00 0.00 1.52
2508 2685 3.128068 CCATCCTTACCGTGCCTTAAAAC 59.872 47.826 0.00 0.00 0.00 2.43
2509 2686 3.488778 TCCTTACCGTGCCTTAAAACA 57.511 42.857 0.00 0.00 0.00 2.83
2510 2687 3.818180 TCCTTACCGTGCCTTAAAACAA 58.182 40.909 0.00 0.00 0.00 2.83
2511 2688 4.205587 TCCTTACCGTGCCTTAAAACAAA 58.794 39.130 0.00 0.00 0.00 2.83
2512 2689 4.036616 TCCTTACCGTGCCTTAAAACAAAC 59.963 41.667 0.00 0.00 0.00 2.93
2513 2690 4.037089 CCTTACCGTGCCTTAAAACAAACT 59.963 41.667 0.00 0.00 0.00 2.66
2514 2691 3.703286 ACCGTGCCTTAAAACAAACTC 57.297 42.857 0.00 0.00 0.00 3.01
2515 2692 3.284617 ACCGTGCCTTAAAACAAACTCT 58.715 40.909 0.00 0.00 0.00 3.24
2516 2693 3.697542 ACCGTGCCTTAAAACAAACTCTT 59.302 39.130 0.00 0.00 0.00 2.85
2517 2694 4.041723 CCGTGCCTTAAAACAAACTCTTG 58.958 43.478 0.00 0.00 38.61 3.02
2518 2695 3.485743 CGTGCCTTAAAACAAACTCTTGC 59.514 43.478 0.00 0.00 35.84 4.01
2519 2696 3.802139 GTGCCTTAAAACAAACTCTTGCC 59.198 43.478 0.00 0.00 35.84 4.52
2520 2697 3.049912 GCCTTAAAACAAACTCTTGCCG 58.950 45.455 0.00 0.00 35.84 5.69
2521 2698 3.243267 GCCTTAAAACAAACTCTTGCCGA 60.243 43.478 0.00 0.00 35.84 5.54
2522 2699 4.558697 GCCTTAAAACAAACTCTTGCCGAT 60.559 41.667 0.00 0.00 35.84 4.18
2523 2700 4.917415 CCTTAAAACAAACTCTTGCCGATG 59.083 41.667 0.00 0.00 35.84 3.84
2524 2701 5.507315 CCTTAAAACAAACTCTTGCCGATGT 60.507 40.000 0.00 0.00 35.84 3.06
2525 2702 3.626028 AAACAAACTCTTGCCGATGTC 57.374 42.857 0.00 0.00 35.84 3.06
2526 2703 2.550830 ACAAACTCTTGCCGATGTCT 57.449 45.000 0.00 0.00 35.84 3.41
2527 2704 2.417719 ACAAACTCTTGCCGATGTCTC 58.582 47.619 0.00 0.00 35.84 3.36
2528 2705 2.224281 ACAAACTCTTGCCGATGTCTCA 60.224 45.455 0.00 0.00 35.84 3.27
2529 2706 3.005554 CAAACTCTTGCCGATGTCTCAT 58.994 45.455 0.00 0.00 0.00 2.90
2530 2707 2.306341 ACTCTTGCCGATGTCTCATG 57.694 50.000 0.00 0.00 0.00 3.07
2531 2708 0.935898 CTCTTGCCGATGTCTCATGC 59.064 55.000 0.00 0.00 0.00 4.06
2532 2709 0.538584 TCTTGCCGATGTCTCATGCT 59.461 50.000 0.00 0.00 0.00 3.79
2533 2710 1.756538 TCTTGCCGATGTCTCATGCTA 59.243 47.619 0.00 0.00 0.00 3.49
2534 2711 2.168313 TCTTGCCGATGTCTCATGCTAA 59.832 45.455 0.00 0.00 0.00 3.09
2535 2712 1.939974 TGCCGATGTCTCATGCTAAC 58.060 50.000 0.00 0.00 0.00 2.34
2536 2713 1.221414 GCCGATGTCTCATGCTAACC 58.779 55.000 0.00 0.00 0.00 2.85
2537 2714 1.473257 GCCGATGTCTCATGCTAACCA 60.473 52.381 0.00 0.00 0.00 3.67
2538 2715 2.477825 CCGATGTCTCATGCTAACCAG 58.522 52.381 0.00 0.00 0.00 4.00
2539 2716 2.477825 CGATGTCTCATGCTAACCAGG 58.522 52.381 0.00 0.00 0.00 4.45
2540 2717 2.216898 GATGTCTCATGCTAACCAGGC 58.783 52.381 0.00 0.00 0.00 4.85
2541 2718 0.253044 TGTCTCATGCTAACCAGGCC 59.747 55.000 0.00 0.00 0.00 5.19
2542 2719 0.811616 GTCTCATGCTAACCAGGCCG 60.812 60.000 0.00 0.00 0.00 6.13
2543 2720 1.524621 CTCATGCTAACCAGGCCGG 60.525 63.158 11.48 11.48 42.50 6.13
2544 2721 2.516930 CATGCTAACCAGGCCGGG 60.517 66.667 21.67 21.67 40.22 5.73
2545 2722 3.015145 ATGCTAACCAGGCCGGGT 61.015 61.111 23.32 23.32 45.04 5.28
2562 2739 3.571216 TTTGGGGTGCCGGCTGTA 61.571 61.111 29.70 3.84 0.00 2.74
2563 2740 3.561120 TTTGGGGTGCCGGCTGTAG 62.561 63.158 29.70 0.00 0.00 2.74
2565 2742 3.480133 GGGGTGCCGGCTGTAGAT 61.480 66.667 29.70 0.00 0.00 1.98
2566 2743 2.203070 GGGTGCCGGCTGTAGATG 60.203 66.667 29.70 0.00 0.00 2.90
2567 2744 2.897350 GGTGCCGGCTGTAGATGC 60.897 66.667 29.70 7.10 0.00 3.91
2568 2745 2.897350 GTGCCGGCTGTAGATGCC 60.897 66.667 29.70 0.01 46.42 4.40
2575 2752 1.710816 GGCTGTAGATGCCTCCTAGT 58.289 55.000 0.00 0.00 46.38 2.57
2576 2753 1.616374 GGCTGTAGATGCCTCCTAGTC 59.384 57.143 0.00 0.00 46.38 2.59
2577 2754 1.616374 GCTGTAGATGCCTCCTAGTCC 59.384 57.143 0.00 0.00 0.00 3.85
2578 2755 2.950781 CTGTAGATGCCTCCTAGTCCA 58.049 52.381 0.00 0.00 0.00 4.02
2579 2756 2.625790 CTGTAGATGCCTCCTAGTCCAC 59.374 54.545 0.00 0.00 0.00 4.02
2580 2757 2.024369 TGTAGATGCCTCCTAGTCCACA 60.024 50.000 0.00 0.00 0.00 4.17
2581 2758 2.254152 AGATGCCTCCTAGTCCACAA 57.746 50.000 0.00 0.00 0.00 3.33
2582 2759 2.551270 AGATGCCTCCTAGTCCACAAA 58.449 47.619 0.00 0.00 0.00 2.83
2583 2760 2.912956 AGATGCCTCCTAGTCCACAAAA 59.087 45.455 0.00 0.00 0.00 2.44
2584 2761 3.525199 AGATGCCTCCTAGTCCACAAAAT 59.475 43.478 0.00 0.00 0.00 1.82
2585 2762 3.350219 TGCCTCCTAGTCCACAAAATC 57.650 47.619 0.00 0.00 0.00 2.17
2586 2763 2.912956 TGCCTCCTAGTCCACAAAATCT 59.087 45.455 0.00 0.00 0.00 2.40
2587 2764 3.274288 GCCTCCTAGTCCACAAAATCTG 58.726 50.000 0.00 0.00 0.00 2.90
2588 2765 3.055094 GCCTCCTAGTCCACAAAATCTGA 60.055 47.826 0.00 0.00 0.00 3.27
2589 2766 4.565652 GCCTCCTAGTCCACAAAATCTGAA 60.566 45.833 0.00 0.00 0.00 3.02
2590 2767 5.181748 CCTCCTAGTCCACAAAATCTGAAG 58.818 45.833 0.00 0.00 0.00 3.02
2591 2768 5.165961 TCCTAGTCCACAAAATCTGAAGG 57.834 43.478 0.00 0.00 0.00 3.46
2592 2769 3.691609 CCTAGTCCACAAAATCTGAAGGC 59.308 47.826 0.00 0.00 0.00 4.35
2593 2770 3.515602 AGTCCACAAAATCTGAAGGCT 57.484 42.857 0.00 0.00 0.00 4.58
2594 2771 3.152341 AGTCCACAAAATCTGAAGGCTG 58.848 45.455 0.00 0.00 0.00 4.85
2595 2772 1.888512 TCCACAAAATCTGAAGGCTGC 59.111 47.619 0.00 0.00 0.00 5.25
2596 2773 1.614903 CCACAAAATCTGAAGGCTGCA 59.385 47.619 0.50 0.00 0.00 4.41
2597 2774 2.232941 CCACAAAATCTGAAGGCTGCAT 59.767 45.455 0.00 0.00 0.00 3.96
2598 2775 3.306502 CCACAAAATCTGAAGGCTGCATT 60.307 43.478 0.00 0.00 0.00 3.56
2599 2776 4.312443 CACAAAATCTGAAGGCTGCATTT 58.688 39.130 0.00 0.00 0.00 2.32
2600 2777 4.753107 CACAAAATCTGAAGGCTGCATTTT 59.247 37.500 0.00 0.00 0.00 1.82
2601 2778 5.927689 CACAAAATCTGAAGGCTGCATTTTA 59.072 36.000 6.50 0.00 0.00 1.52
2602 2779 6.592607 CACAAAATCTGAAGGCTGCATTTTAT 59.407 34.615 6.50 0.00 0.00 1.40
2603 2780 7.118680 CACAAAATCTGAAGGCTGCATTTTATT 59.881 33.333 6.50 0.00 0.00 1.40
2604 2781 7.662669 ACAAAATCTGAAGGCTGCATTTTATTT 59.337 29.630 6.50 5.38 0.00 1.40
2605 2782 9.153721 CAAAATCTGAAGGCTGCATTTTATTTA 57.846 29.630 6.50 0.00 0.00 1.40
2606 2783 9.895138 AAAATCTGAAGGCTGCATTTTATTTAT 57.105 25.926 5.22 0.00 0.00 1.40
2607 2784 9.895138 AAATCTGAAGGCTGCATTTTATTTATT 57.105 25.926 0.00 0.00 0.00 1.40
2608 2785 9.895138 AATCTGAAGGCTGCATTTTATTTATTT 57.105 25.926 0.00 0.00 0.00 1.40
2630 2807 7.697352 TTTATTTTACAAACGAGTCGTGAGA 57.303 32.000 20.68 2.19 39.99 3.27
2631 2808 7.878477 TTATTTTACAAACGAGTCGTGAGAT 57.122 32.000 20.68 8.02 45.19 2.75
2632 2809 5.570262 TTTTACAAACGAGTCGTGAGATG 57.430 39.130 20.68 17.29 45.19 2.90
2633 2810 4.492791 TTACAAACGAGTCGTGAGATGA 57.507 40.909 20.68 1.34 45.19 2.92
2634 2811 2.935042 ACAAACGAGTCGTGAGATGAG 58.065 47.619 20.68 6.79 45.19 2.90
2635 2812 1.651138 CAAACGAGTCGTGAGATGAGC 59.349 52.381 20.68 0.00 45.19 4.26
2636 2813 0.179187 AACGAGTCGTGAGATGAGCG 60.179 55.000 20.68 0.00 45.19 5.03
2637 2814 1.297967 CGAGTCGTGAGATGAGCGG 60.298 63.158 3.82 0.00 45.19 5.52
2638 2815 1.803943 GAGTCGTGAGATGAGCGGT 59.196 57.895 0.00 0.00 45.19 5.68
2639 2816 0.171455 GAGTCGTGAGATGAGCGGTT 59.829 55.000 0.00 0.00 45.19 4.44
2640 2817 0.603569 AGTCGTGAGATGAGCGGTTT 59.396 50.000 0.00 0.00 45.19 3.27
2641 2818 0.992802 GTCGTGAGATGAGCGGTTTC 59.007 55.000 0.00 0.00 45.19 2.78
2642 2819 0.601057 TCGTGAGATGAGCGGTTTCA 59.399 50.000 0.00 0.00 33.31 2.69
2643 2820 0.994995 CGTGAGATGAGCGGTTTCAG 59.005 55.000 0.00 0.00 0.00 3.02
2644 2821 1.670087 CGTGAGATGAGCGGTTTCAGT 60.670 52.381 0.00 0.00 0.00 3.41
2645 2822 2.415491 CGTGAGATGAGCGGTTTCAGTA 60.415 50.000 0.00 0.00 0.00 2.74
2646 2823 3.585862 GTGAGATGAGCGGTTTCAGTAA 58.414 45.455 0.00 0.00 0.00 2.24
2647 2824 3.614616 GTGAGATGAGCGGTTTCAGTAAG 59.385 47.826 0.00 0.00 0.00 2.34
2648 2825 2.605366 GAGATGAGCGGTTTCAGTAAGC 59.395 50.000 0.00 0.00 0.00 3.09
2649 2826 2.028112 AGATGAGCGGTTTCAGTAAGCA 60.028 45.455 0.00 0.00 33.83 3.91
2650 2827 1.795768 TGAGCGGTTTCAGTAAGCAG 58.204 50.000 0.00 0.00 33.83 4.24
2651 2828 1.079503 GAGCGGTTTCAGTAAGCAGG 58.920 55.000 0.00 0.00 33.83 4.85
2652 2829 0.955919 AGCGGTTTCAGTAAGCAGGC 60.956 55.000 0.00 0.00 33.83 4.85
2653 2830 1.787847 CGGTTTCAGTAAGCAGGCG 59.212 57.895 0.00 0.00 33.83 5.52
2654 2831 1.635663 CGGTTTCAGTAAGCAGGCGG 61.636 60.000 0.00 0.00 33.83 6.13
2655 2832 0.321298 GGTTTCAGTAAGCAGGCGGA 60.321 55.000 0.00 0.00 34.37 5.54
2656 2833 1.079503 GTTTCAGTAAGCAGGCGGAG 58.920 55.000 0.00 0.00 0.00 4.63
2657 2834 0.036388 TTTCAGTAAGCAGGCGGAGG 60.036 55.000 0.00 0.00 0.00 4.30
2668 2845 4.899239 GCGGAGGCGGAGATGTGG 62.899 72.222 0.00 0.00 0.00 4.17
2669 2846 3.461773 CGGAGGCGGAGATGTGGT 61.462 66.667 0.00 0.00 0.00 4.16
2670 2847 2.990479 GGAGGCGGAGATGTGGTT 59.010 61.111 0.00 0.00 0.00 3.67
2671 2848 1.299976 GGAGGCGGAGATGTGGTTT 59.700 57.895 0.00 0.00 0.00 3.27
2672 2849 0.322546 GGAGGCGGAGATGTGGTTTT 60.323 55.000 0.00 0.00 0.00 2.43
2673 2850 1.534729 GAGGCGGAGATGTGGTTTTT 58.465 50.000 0.00 0.00 0.00 1.94
2687 2864 3.972276 TTTTTGGGAGCGTGCGGC 61.972 61.111 0.00 0.00 44.05 6.53
2716 2893 4.735132 CCTCGGCGGCGTTCTTCA 62.735 66.667 31.06 9.79 0.00 3.02
2717 2894 3.479269 CTCGGCGGCGTTCTTCAC 61.479 66.667 31.06 0.00 0.00 3.18
2718 2895 3.916392 CTCGGCGGCGTTCTTCACT 62.916 63.158 31.06 0.00 0.00 3.41
2719 2896 3.777925 CGGCGGCGTTCTTCACTG 61.778 66.667 24.74 0.00 0.00 3.66
2720 2897 4.090057 GGCGGCGTTCTTCACTGC 62.090 66.667 9.37 0.00 0.00 4.40
2721 2898 4.430423 GCGGCGTTCTTCACTGCG 62.430 66.667 9.37 0.00 0.00 5.18
2722 2899 3.777925 CGGCGTTCTTCACTGCGG 61.778 66.667 0.00 0.00 0.00 5.69
2723 2900 3.423154 GGCGTTCTTCACTGCGGG 61.423 66.667 0.00 0.00 0.00 6.13
2724 2901 2.665185 GCGTTCTTCACTGCGGGT 60.665 61.111 0.00 0.00 0.00 5.28
2725 2902 2.954753 GCGTTCTTCACTGCGGGTG 61.955 63.158 0.00 0.00 46.60 4.61
2726 2903 2.317609 CGTTCTTCACTGCGGGTGG 61.318 63.158 9.26 0.00 45.38 4.61
2727 2904 1.227853 GTTCTTCACTGCGGGTGGT 60.228 57.895 9.26 0.00 45.38 4.16
2728 2905 1.070786 TTCTTCACTGCGGGTGGTC 59.929 57.895 9.26 0.00 45.38 4.02
2729 2906 1.407656 TTCTTCACTGCGGGTGGTCT 61.408 55.000 9.26 0.00 45.38 3.85
2730 2907 1.374758 CTTCACTGCGGGTGGTCTC 60.375 63.158 9.26 0.00 45.38 3.36
2731 2908 1.821061 CTTCACTGCGGGTGGTCTCT 61.821 60.000 9.26 0.00 45.38 3.10
2732 2909 2.047844 CACTGCGGGTGGTCTCTG 60.048 66.667 0.00 0.00 41.90 3.35
2733 2910 3.314331 ACTGCGGGTGGTCTCTGG 61.314 66.667 0.00 0.00 0.00 3.86
2734 2911 3.314331 CTGCGGGTGGTCTCTGGT 61.314 66.667 0.00 0.00 0.00 4.00
2735 2912 2.847234 TGCGGGTGGTCTCTGGTT 60.847 61.111 0.00 0.00 0.00 3.67
2736 2913 2.358737 GCGGGTGGTCTCTGGTTG 60.359 66.667 0.00 0.00 0.00 3.77
2737 2914 3.148084 CGGGTGGTCTCTGGTTGT 58.852 61.111 0.00 0.00 0.00 3.32
2738 2915 1.301716 CGGGTGGTCTCTGGTTGTG 60.302 63.158 0.00 0.00 0.00 3.33
2739 2916 1.600916 GGGTGGTCTCTGGTTGTGC 60.601 63.158 0.00 0.00 0.00 4.57
2740 2917 1.451936 GGTGGTCTCTGGTTGTGCT 59.548 57.895 0.00 0.00 0.00 4.40
2741 2918 0.603975 GGTGGTCTCTGGTTGTGCTC 60.604 60.000 0.00 0.00 0.00 4.26
2742 2919 0.946221 GTGGTCTCTGGTTGTGCTCG 60.946 60.000 0.00 0.00 0.00 5.03
2743 2920 1.374758 GGTCTCTGGTTGTGCTCGG 60.375 63.158 0.00 0.00 0.00 4.63
2744 2921 1.666011 GTCTCTGGTTGTGCTCGGA 59.334 57.895 0.00 0.00 0.00 4.55
2745 2922 0.389166 GTCTCTGGTTGTGCTCGGAG 60.389 60.000 0.00 0.00 37.65 4.63
2746 2923 1.739562 CTCTGGTTGTGCTCGGAGC 60.740 63.158 22.78 22.78 42.82 4.70
2747 2924 2.743928 CTGGTTGTGCTCGGAGCC 60.744 66.667 26.00 17.47 41.51 4.70
2748 2925 4.329545 TGGTTGTGCTCGGAGCCC 62.330 66.667 26.00 19.47 41.51 5.19
2750 2927 4.021925 GTTGTGCTCGGAGCCCCT 62.022 66.667 26.00 0.00 41.51 4.79
2751 2928 3.706373 TTGTGCTCGGAGCCCCTC 61.706 66.667 26.00 14.24 41.51 4.30
2759 2936 3.471806 GGAGCCCCTCCTCCGTTC 61.472 72.222 4.04 0.00 46.41 3.95
2760 2937 3.839432 GAGCCCCTCCTCCGTTCG 61.839 72.222 0.00 0.00 0.00 3.95
2761 2938 4.377760 AGCCCCTCCTCCGTTCGA 62.378 66.667 0.00 0.00 0.00 3.71
2762 2939 3.387947 GCCCCTCCTCCGTTCGAA 61.388 66.667 0.00 0.00 0.00 3.71
2763 2940 2.732619 GCCCCTCCTCCGTTCGAAT 61.733 63.158 0.00 0.00 0.00 3.34
2764 2941 1.442148 CCCCTCCTCCGTTCGAATC 59.558 63.158 0.00 0.00 0.00 2.52
2765 2942 1.043673 CCCCTCCTCCGTTCGAATCT 61.044 60.000 0.00 0.00 0.00 2.40
2766 2943 0.103208 CCCTCCTCCGTTCGAATCTG 59.897 60.000 0.00 0.00 0.00 2.90
2767 2944 0.103208 CCTCCTCCGTTCGAATCTGG 59.897 60.000 0.00 4.34 0.00 3.86
2768 2945 0.103208 CTCCTCCGTTCGAATCTGGG 59.897 60.000 0.00 2.55 0.00 4.45
2769 2946 1.144057 CCTCCGTTCGAATCTGGGG 59.856 63.158 0.00 3.94 0.00 4.96
2770 2947 1.144057 CTCCGTTCGAATCTGGGGG 59.856 63.158 0.00 0.00 0.00 5.40
2771 2948 1.611261 TCCGTTCGAATCTGGGGGT 60.611 57.895 0.00 0.00 0.00 4.95
2772 2949 0.324552 TCCGTTCGAATCTGGGGGTA 60.325 55.000 0.00 0.00 0.00 3.69
2773 2950 0.538118 CCGTTCGAATCTGGGGGTAA 59.462 55.000 0.00 0.00 0.00 2.85
2774 2951 1.472728 CCGTTCGAATCTGGGGGTAAG 60.473 57.143 0.00 0.00 0.00 2.34
2775 2952 1.664873 GTTCGAATCTGGGGGTAAGC 58.335 55.000 0.00 0.00 0.00 3.09
2776 2953 0.544697 TTCGAATCTGGGGGTAAGCC 59.455 55.000 0.00 0.00 0.00 4.35
2777 2954 0.619255 TCGAATCTGGGGGTAAGCCA 60.619 55.000 0.00 0.00 36.17 4.75
2778 2955 0.474184 CGAATCTGGGGGTAAGCCAT 59.526 55.000 0.00 0.00 36.17 4.40
2779 2956 1.815408 CGAATCTGGGGGTAAGCCATG 60.815 57.143 0.00 0.00 36.17 3.66
2780 2957 0.557729 AATCTGGGGGTAAGCCATGG 59.442 55.000 7.63 7.63 36.17 3.66
2781 2958 2.011617 ATCTGGGGGTAAGCCATGGC 62.012 60.000 30.12 30.12 42.33 4.40
2796 2973 4.803908 GGCTGGGCCCTTCTTCGG 62.804 72.222 25.70 0.24 44.06 4.30
2804 2981 4.436998 CCTTCTTCGGCGGCGACT 62.437 66.667 34.85 0.00 0.00 4.18
2805 2982 2.881352 CTTCTTCGGCGGCGACTC 60.881 66.667 34.85 0.00 0.00 3.36
2806 2983 3.626680 CTTCTTCGGCGGCGACTCA 62.627 63.158 34.85 18.96 0.00 3.41
2807 2984 3.626680 TTCTTCGGCGGCGACTCAG 62.627 63.158 34.85 27.30 0.00 3.35
2826 3003 2.036731 TCCCGCGGAGAGAGGAAA 59.963 61.111 30.73 0.00 43.02 3.13
2827 3004 1.381327 TCCCGCGGAGAGAGGAAAT 60.381 57.895 30.73 0.00 43.02 2.17
2828 3005 0.976073 TCCCGCGGAGAGAGGAAATT 60.976 55.000 30.73 0.00 43.02 1.82
2829 3006 0.811616 CCCGCGGAGAGAGGAAATTG 60.812 60.000 30.73 0.00 43.02 2.32
2830 3007 1.432270 CCGCGGAGAGAGGAAATTGC 61.432 60.000 24.07 0.00 43.02 3.56
2831 3008 0.740868 CGCGGAGAGAGGAAATTGCA 60.741 55.000 0.00 0.00 0.00 4.08
2832 3009 0.729690 GCGGAGAGAGGAAATTGCAC 59.270 55.000 0.00 0.00 0.00 4.57
2833 3010 1.945819 GCGGAGAGAGGAAATTGCACA 60.946 52.381 0.00 0.00 0.00 4.57
2834 3011 2.426522 CGGAGAGAGGAAATTGCACAA 58.573 47.619 0.00 0.00 0.00 3.33
2835 3012 2.813754 CGGAGAGAGGAAATTGCACAAA 59.186 45.455 0.00 0.00 0.00 2.83
2836 3013 3.365364 CGGAGAGAGGAAATTGCACAAAC 60.365 47.826 0.00 0.00 0.00 2.93
2837 3014 3.057245 GGAGAGAGGAAATTGCACAAACC 60.057 47.826 0.00 0.00 0.00 3.27
2838 3015 3.565307 AGAGAGGAAATTGCACAAACCA 58.435 40.909 0.00 0.00 0.00 3.67
2839 3016 3.319122 AGAGAGGAAATTGCACAAACCAC 59.681 43.478 0.00 0.00 0.00 4.16
2840 3017 3.299503 AGAGGAAATTGCACAAACCACT 58.700 40.909 0.00 0.00 0.00 4.00
2841 3018 3.706086 AGAGGAAATTGCACAAACCACTT 59.294 39.130 0.00 0.00 0.00 3.16
2842 3019 4.892934 AGAGGAAATTGCACAAACCACTTA 59.107 37.500 0.00 0.00 0.00 2.24
2843 3020 4.944048 AGGAAATTGCACAAACCACTTAC 58.056 39.130 0.00 0.00 0.00 2.34
2844 3021 4.649218 AGGAAATTGCACAAACCACTTACT 59.351 37.500 0.00 0.00 0.00 2.24
2845 3022 5.128663 AGGAAATTGCACAAACCACTTACTT 59.871 36.000 0.00 0.00 0.00 2.24
2846 3023 5.815222 GGAAATTGCACAAACCACTTACTTT 59.185 36.000 0.00 0.00 0.00 2.66
2847 3024 6.315144 GGAAATTGCACAAACCACTTACTTTT 59.685 34.615 0.00 0.00 0.00 2.27
2848 3025 6.660887 AATTGCACAAACCACTTACTTTTG 57.339 33.333 0.00 0.00 36.49 2.44
2849 3026 4.116747 TGCACAAACCACTTACTTTTGG 57.883 40.909 0.00 0.00 39.00 3.28
2851 3028 3.862845 GCACAAACCACTTACTTTTGGTG 59.137 43.478 0.00 0.00 45.84 4.17
2852 3029 3.862845 CACAAACCACTTACTTTTGGTGC 59.137 43.478 0.00 0.00 45.84 5.01
2853 3030 3.767131 ACAAACCACTTACTTTTGGTGCT 59.233 39.130 0.00 0.00 45.84 4.40
2854 3031 4.951094 ACAAACCACTTACTTTTGGTGCTA 59.049 37.500 0.00 0.00 45.84 3.49
2855 3032 5.067283 ACAAACCACTTACTTTTGGTGCTAG 59.933 40.000 0.00 0.00 45.84 3.42
2856 3033 4.432980 ACCACTTACTTTTGGTGCTAGT 57.567 40.909 0.00 0.00 44.80 2.57
2857 3034 4.788679 ACCACTTACTTTTGGTGCTAGTT 58.211 39.130 0.00 0.00 44.80 2.24
2858 3035 5.198207 ACCACTTACTTTTGGTGCTAGTTT 58.802 37.500 0.00 0.00 44.80 2.66
2859 3036 5.067283 ACCACTTACTTTTGGTGCTAGTTTG 59.933 40.000 0.00 0.00 44.80 2.93
2860 3037 4.976116 CACTTACTTTTGGTGCTAGTTTGC 59.024 41.667 0.00 0.00 0.00 3.68
2861 3038 4.642885 ACTTACTTTTGGTGCTAGTTTGCA 59.357 37.500 0.00 0.00 41.05 4.08
2870 3047 1.946768 TGCTAGTTTGCACAGAACACC 59.053 47.619 2.79 0.00 38.12 4.16
2871 3048 1.266989 GCTAGTTTGCACAGAACACCC 59.733 52.381 2.79 0.00 0.00 4.61
2872 3049 2.571212 CTAGTTTGCACAGAACACCCA 58.429 47.619 2.79 0.00 0.00 4.51
2873 3050 1.102978 AGTTTGCACAGAACACCCAC 58.897 50.000 2.79 0.00 0.00 4.61
2874 3051 1.102978 GTTTGCACAGAACACCCACT 58.897 50.000 0.00 0.00 0.00 4.00
2875 3052 1.476488 GTTTGCACAGAACACCCACTT 59.524 47.619 0.00 0.00 0.00 3.16
2876 3053 1.846007 TTGCACAGAACACCCACTTT 58.154 45.000 0.00 0.00 0.00 2.66
2877 3054 2.719531 TGCACAGAACACCCACTTTA 57.280 45.000 0.00 0.00 0.00 1.85
2878 3055 2.294074 TGCACAGAACACCCACTTTAC 58.706 47.619 0.00 0.00 0.00 2.01
2879 3056 2.294074 GCACAGAACACCCACTTTACA 58.706 47.619 0.00 0.00 0.00 2.41
2880 3057 2.884639 GCACAGAACACCCACTTTACAT 59.115 45.455 0.00 0.00 0.00 2.29
2881 3058 3.304659 GCACAGAACACCCACTTTACATG 60.305 47.826 0.00 0.00 0.00 3.21
2882 3059 3.882888 CACAGAACACCCACTTTACATGT 59.117 43.478 2.69 2.69 0.00 3.21
2883 3060 4.338118 CACAGAACACCCACTTTACATGTT 59.662 41.667 2.30 0.00 36.24 2.71
2884 3061 4.953579 ACAGAACACCCACTTTACATGTTT 59.046 37.500 2.30 0.00 33.76 2.83
2885 3062 5.420739 ACAGAACACCCACTTTACATGTTTT 59.579 36.000 2.30 0.00 33.76 2.43
2886 3063 5.748152 CAGAACACCCACTTTACATGTTTTG 59.252 40.000 2.30 0.00 33.76 2.44
2887 3064 5.420739 AGAACACCCACTTTACATGTTTTGT 59.579 36.000 2.30 0.00 42.62 2.83
2888 3065 5.669164 ACACCCACTTTACATGTTTTGTT 57.331 34.783 2.30 0.00 39.87 2.83
2889 3066 5.415221 ACACCCACTTTACATGTTTTGTTG 58.585 37.500 2.30 0.00 39.87 3.33
2890 3067 4.269844 CACCCACTTTACATGTTTTGTTGC 59.730 41.667 2.30 0.00 39.87 4.17
2891 3068 4.081420 ACCCACTTTACATGTTTTGTTGCA 60.081 37.500 2.30 0.00 39.87 4.08
2892 3069 5.055812 CCCACTTTACATGTTTTGTTGCAT 58.944 37.500 2.30 0.00 39.87 3.96
2893 3070 6.183360 ACCCACTTTACATGTTTTGTTGCATA 60.183 34.615 2.30 0.00 39.87 3.14
2894 3071 6.703607 CCCACTTTACATGTTTTGTTGCATAA 59.296 34.615 2.30 0.00 39.87 1.90
2895 3072 7.225538 CCCACTTTACATGTTTTGTTGCATAAA 59.774 33.333 2.30 0.00 39.87 1.40
2896 3073 8.607459 CCACTTTACATGTTTTGTTGCATAAAA 58.393 29.630 2.30 5.55 39.87 1.52
2897 3074 9.419737 CACTTTACATGTTTTGTTGCATAAAAC 57.580 29.630 22.82 22.82 44.31 2.43
2905 3082 8.668510 TGTTTTGTTGCATAAAACACCATATT 57.331 26.923 25.97 0.00 46.90 1.28
2906 3083 9.113838 TGTTTTGTTGCATAAAACACCATATTT 57.886 25.926 25.97 0.00 46.90 1.40
2907 3084 9.943163 GTTTTGTTGCATAAAACACCATATTTT 57.057 25.926 23.86 0.00 43.79 1.82
2908 3085 9.941664 TTTTGTTGCATAAAACACCATATTTTG 57.058 25.926 5.55 0.00 39.70 2.44
2945 3122 9.764363 TTGTAGCTAGGTCTAATACATCATTTG 57.236 33.333 0.00 0.00 0.00 2.32
2946 3123 9.143155 TGTAGCTAGGTCTAATACATCATTTGA 57.857 33.333 0.00 0.00 0.00 2.69
2947 3124 9.982651 GTAGCTAGGTCTAATACATCATTTGAA 57.017 33.333 0.00 0.00 31.50 2.69
2949 3126 9.499479 AGCTAGGTCTAATACATCATTTGAATG 57.501 33.333 0.00 0.00 37.75 2.67
2950 3127 9.277783 GCTAGGTCTAATACATCATTTGAATGT 57.722 33.333 3.85 0.00 37.65 2.71
2953 3130 9.466497 AGGTCTAATACATCATTTGAATGTGTT 57.534 29.630 13.25 4.15 37.65 3.32
2954 3131 9.507280 GGTCTAATACATCATTTGAATGTGTTG 57.493 33.333 13.25 8.67 37.65 3.33
2959 3136 8.920509 ATACATCATTTGAATGTGTTGACATG 57.079 30.769 13.25 0.00 42.30 3.21
2960 3137 6.983984 ACATCATTTGAATGTGTTGACATGA 58.016 32.000 0.00 0.00 42.30 3.07
2961 3138 7.608153 ACATCATTTGAATGTGTTGACATGAT 58.392 30.769 0.00 0.00 42.30 2.45
2962 3139 8.092068 ACATCATTTGAATGTGTTGACATGATT 58.908 29.630 0.00 0.00 42.30 2.57
2963 3140 8.592155 CATCATTTGAATGTGTTGACATGATTC 58.408 33.333 0.00 0.00 42.30 2.52
2964 3141 7.092079 TCATTTGAATGTGTTGACATGATTCC 58.908 34.615 0.00 0.00 42.30 3.01
2965 3142 6.653526 TTTGAATGTGTTGACATGATTCCT 57.346 33.333 0.00 0.00 42.30 3.36
2966 3143 7.757941 TTTGAATGTGTTGACATGATTCCTA 57.242 32.000 0.00 3.54 42.30 2.94
2967 3144 7.757941 TTGAATGTGTTGACATGATTCCTAA 57.242 32.000 0.00 3.78 42.30 2.69
2968 3145 7.144722 TGAATGTGTTGACATGATTCCTAAC 57.855 36.000 0.00 0.00 42.30 2.34
2969 3146 6.714356 TGAATGTGTTGACATGATTCCTAACA 59.286 34.615 0.00 0.00 42.30 2.41
2970 3147 6.748333 ATGTGTTGACATGATTCCTAACAG 57.252 37.500 0.00 0.00 41.52 3.16
2971 3148 5.620206 TGTGTTGACATGATTCCTAACAGT 58.380 37.500 0.00 0.00 0.00 3.55
2972 3149 5.469760 TGTGTTGACATGATTCCTAACAGTG 59.530 40.000 0.00 0.00 0.00 3.66
2973 3150 5.003160 TGTTGACATGATTCCTAACAGTGG 58.997 41.667 0.00 0.00 0.00 4.00
2974 3151 4.220693 TGACATGATTCCTAACAGTGGG 57.779 45.455 0.00 0.00 0.00 4.61
2975 3152 3.587061 TGACATGATTCCTAACAGTGGGT 59.413 43.478 0.00 0.00 0.00 4.51
2976 3153 4.192317 GACATGATTCCTAACAGTGGGTC 58.808 47.826 0.00 0.00 0.00 4.46
2977 3154 3.846588 ACATGATTCCTAACAGTGGGTCT 59.153 43.478 0.00 0.00 0.00 3.85
2978 3155 5.030147 ACATGATTCCTAACAGTGGGTCTA 58.970 41.667 0.00 0.00 0.00 2.59
2979 3156 5.129485 ACATGATTCCTAACAGTGGGTCTAG 59.871 44.000 0.00 0.00 0.00 2.43
2980 3157 4.684724 TGATTCCTAACAGTGGGTCTAGT 58.315 43.478 0.00 0.00 0.00 2.57
2981 3158 5.091552 TGATTCCTAACAGTGGGTCTAGTT 58.908 41.667 0.00 0.00 0.00 2.24
2982 3159 5.546499 TGATTCCTAACAGTGGGTCTAGTTT 59.454 40.000 0.00 0.00 0.00 2.66
2983 3160 4.884668 TCCTAACAGTGGGTCTAGTTTG 57.115 45.455 0.00 0.00 0.00 2.93
2984 3161 4.228824 TCCTAACAGTGGGTCTAGTTTGT 58.771 43.478 0.00 0.00 0.00 2.83
2985 3162 5.396485 TCCTAACAGTGGGTCTAGTTTGTA 58.604 41.667 0.00 0.00 0.00 2.41
2986 3163 5.840149 TCCTAACAGTGGGTCTAGTTTGTAA 59.160 40.000 0.00 0.00 0.00 2.41
2987 3164 6.014840 TCCTAACAGTGGGTCTAGTTTGTAAG 60.015 42.308 0.00 0.00 0.00 2.34
2988 3165 5.625568 AACAGTGGGTCTAGTTTGTAAGT 57.374 39.130 0.00 0.00 0.00 2.24
2989 3166 4.957296 ACAGTGGGTCTAGTTTGTAAGTG 58.043 43.478 0.00 0.00 0.00 3.16
2990 3167 3.746492 CAGTGGGTCTAGTTTGTAAGTGC 59.254 47.826 0.00 0.00 0.00 4.40
2991 3168 3.389983 AGTGGGTCTAGTTTGTAAGTGCA 59.610 43.478 0.00 0.00 0.00 4.57
2992 3169 4.041691 AGTGGGTCTAGTTTGTAAGTGCAT 59.958 41.667 0.00 0.00 0.00 3.96
2993 3170 4.392138 GTGGGTCTAGTTTGTAAGTGCATC 59.608 45.833 0.00 0.00 0.00 3.91
2994 3171 3.617263 GGGTCTAGTTTGTAAGTGCATCG 59.383 47.826 0.00 0.00 0.00 3.84
2995 3172 3.617263 GGTCTAGTTTGTAAGTGCATCGG 59.383 47.826 0.00 0.00 0.00 4.18
2996 3173 4.243270 GTCTAGTTTGTAAGTGCATCGGT 58.757 43.478 0.00 0.00 0.00 4.69
2997 3174 4.091509 GTCTAGTTTGTAAGTGCATCGGTG 59.908 45.833 0.00 0.00 0.00 4.94
2998 3175 3.120321 AGTTTGTAAGTGCATCGGTGA 57.880 42.857 0.00 0.00 0.00 4.02
2999 3176 2.806244 AGTTTGTAAGTGCATCGGTGAC 59.194 45.455 0.00 0.00 0.00 3.67
3000 3177 2.535012 TTGTAAGTGCATCGGTGACA 57.465 45.000 0.00 0.00 0.00 3.58
3001 3178 2.535012 TGTAAGTGCATCGGTGACAA 57.465 45.000 0.00 0.00 0.00 3.18
3002 3179 2.839975 TGTAAGTGCATCGGTGACAAA 58.160 42.857 0.00 0.00 0.00 2.83
3003 3180 3.206964 TGTAAGTGCATCGGTGACAAAA 58.793 40.909 0.00 0.00 0.00 2.44
3004 3181 3.628032 TGTAAGTGCATCGGTGACAAAAA 59.372 39.130 0.00 0.00 0.00 1.94
3024 3201 5.736951 AAAAACAGCCACATTATTAGCCA 57.263 34.783 0.00 0.00 0.00 4.75
3025 3202 5.736951 AAAACAGCCACATTATTAGCCAA 57.263 34.783 0.00 0.00 0.00 4.52
3026 3203 5.937975 AAACAGCCACATTATTAGCCAAT 57.062 34.783 0.00 0.00 0.00 3.16
3027 3204 7.416964 AAAACAGCCACATTATTAGCCAATA 57.583 32.000 0.00 0.00 0.00 1.90
3028 3205 7.416964 AAACAGCCACATTATTAGCCAATAA 57.583 32.000 0.00 0.00 40.13 1.40
3029 3206 6.639632 ACAGCCACATTATTAGCCAATAAG 57.360 37.500 3.74 0.00 39.40 1.73
3030 3207 6.364701 ACAGCCACATTATTAGCCAATAAGA 58.635 36.000 3.74 0.00 39.40 2.10
3031 3208 6.833416 ACAGCCACATTATTAGCCAATAAGAA 59.167 34.615 3.74 0.00 39.40 2.52
3032 3209 7.141363 CAGCCACATTATTAGCCAATAAGAAC 58.859 38.462 3.74 0.00 39.40 3.01
3033 3210 7.013655 CAGCCACATTATTAGCCAATAAGAACT 59.986 37.037 3.74 0.00 39.40 3.01
3034 3211 7.013655 AGCCACATTATTAGCCAATAAGAACTG 59.986 37.037 3.74 0.20 39.40 3.16
3035 3212 7.141363 CCACATTATTAGCCAATAAGAACTGC 58.859 38.462 3.74 0.00 39.40 4.40
3036 3213 7.141363 CACATTATTAGCCAATAAGAACTGCC 58.859 38.462 3.74 0.00 39.40 4.85
3037 3214 6.833416 ACATTATTAGCCAATAAGAACTGCCA 59.167 34.615 3.74 0.00 39.40 4.92
3038 3215 7.341769 ACATTATTAGCCAATAAGAACTGCCAA 59.658 33.333 3.74 0.00 39.40 4.52
3039 3216 7.896383 TTATTAGCCAATAAGAACTGCCAAT 57.104 32.000 0.00 0.00 32.78 3.16
3040 3217 8.988546 TTATTAGCCAATAAGAACTGCCAATA 57.011 30.769 0.00 0.00 32.78 1.90
3041 3218 9.586732 TTATTAGCCAATAAGAACTGCCAATAT 57.413 29.630 0.00 0.00 32.78 1.28
3042 3219 7.510549 TTAGCCAATAAGAACTGCCAATATC 57.489 36.000 0.00 0.00 0.00 1.63
3043 3220 5.699143 AGCCAATAAGAACTGCCAATATCT 58.301 37.500 0.00 0.00 0.00 1.98
3044 3221 5.767168 AGCCAATAAGAACTGCCAATATCTC 59.233 40.000 0.00 0.00 0.00 2.75
3045 3222 5.532406 GCCAATAAGAACTGCCAATATCTCA 59.468 40.000 0.00 0.00 0.00 3.27
3046 3223 6.514048 GCCAATAAGAACTGCCAATATCTCAC 60.514 42.308 0.00 0.00 0.00 3.51
3047 3224 6.543465 CCAATAAGAACTGCCAATATCTCACA 59.457 38.462 0.00 0.00 0.00 3.58
3048 3225 7.067372 CCAATAAGAACTGCCAATATCTCACAA 59.933 37.037 0.00 0.00 0.00 3.33
3049 3226 8.627403 CAATAAGAACTGCCAATATCTCACAAT 58.373 33.333 0.00 0.00 0.00 2.71
3050 3227 8.757982 ATAAGAACTGCCAATATCTCACAATT 57.242 30.769 0.00 0.00 0.00 2.32
3051 3228 6.690194 AGAACTGCCAATATCTCACAATTC 57.310 37.500 0.00 0.00 0.00 2.17
3052 3229 6.421485 AGAACTGCCAATATCTCACAATTCT 58.579 36.000 0.00 0.00 0.00 2.40
3053 3230 6.888632 AGAACTGCCAATATCTCACAATTCTT 59.111 34.615 0.00 0.00 0.00 2.52
3054 3231 7.395489 AGAACTGCCAATATCTCACAATTCTTT 59.605 33.333 0.00 0.00 0.00 2.52
3055 3232 6.860080 ACTGCCAATATCTCACAATTCTTTG 58.140 36.000 0.00 0.00 38.86 2.77
3056 3233 5.653507 TGCCAATATCTCACAATTCTTTGC 58.346 37.500 0.00 0.00 36.22 3.68
3057 3234 5.419788 TGCCAATATCTCACAATTCTTTGCT 59.580 36.000 0.00 0.00 36.22 3.91
3058 3235 5.975939 GCCAATATCTCACAATTCTTTGCTC 59.024 40.000 0.00 0.00 36.22 4.26
3059 3236 6.501781 CCAATATCTCACAATTCTTTGCTCC 58.498 40.000 0.00 0.00 36.22 4.70
3060 3237 6.095860 CCAATATCTCACAATTCTTTGCTCCA 59.904 38.462 0.00 0.00 36.22 3.86
3061 3238 7.363181 CCAATATCTCACAATTCTTTGCTCCAA 60.363 37.037 0.00 0.00 36.22 3.53
3062 3239 7.893124 ATATCTCACAATTCTTTGCTCCAAT 57.107 32.000 0.00 0.00 36.22 3.16
3063 3240 6.600882 ATCTCACAATTCTTTGCTCCAATT 57.399 33.333 0.00 0.00 36.22 2.32
3064 3241 5.775686 TCTCACAATTCTTTGCTCCAATTG 58.224 37.500 0.00 0.00 41.40 2.32
3065 3242 5.535783 TCTCACAATTCTTTGCTCCAATTGA 59.464 36.000 7.12 0.00 39.06 2.57
3066 3243 5.775686 TCACAATTCTTTGCTCCAATTGAG 58.224 37.500 7.12 3.86 44.47 3.02
3098 3275 7.464830 TTTTCTAGAATATTAGTGAGCGCAC 57.535 36.000 13.22 13.22 45.49 5.34
3165 3342 8.674263 AACAAAAATATTGAACAGCCAATTGA 57.326 26.923 7.12 0.00 37.81 2.57
3166 3343 8.086851 ACAAAAATATTGAACAGCCAATTGAC 57.913 30.769 7.12 0.00 37.81 3.18
3167 3344 7.714377 ACAAAAATATTGAACAGCCAATTGACA 59.286 29.630 7.12 0.00 37.81 3.58
3168 3345 8.723311 CAAAAATATTGAACAGCCAATTGACAT 58.277 29.630 7.12 0.00 37.81 3.06
3169 3346 8.851541 AAAATATTGAACAGCCAATTGACATT 57.148 26.923 7.12 0.00 37.81 2.71
3170 3347 7.837202 AATATTGAACAGCCAATTGACATTG 57.163 32.000 7.12 2.25 39.79 2.82
3171 3348 3.029320 TGAACAGCCAATTGACATTGC 57.971 42.857 7.12 0.83 38.88 3.56
3172 3349 2.364647 TGAACAGCCAATTGACATTGCA 59.635 40.909 7.12 0.00 38.88 4.08
3173 3350 3.181468 TGAACAGCCAATTGACATTGCAA 60.181 39.130 7.12 0.00 38.88 4.08
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
8 9 3.386402 TGTGTGTGTGTGAGTTCATAGGA 59.614 43.478 0.00 0.00 0.00 2.94
18 19 1.471851 CGGTAAGGTGTGTGTGTGTGA 60.472 52.381 0.00 0.00 0.00 3.58
43 45 1.457643 TCGGAGGTGCTCATAGGGG 60.458 63.158 0.00 0.00 31.08 4.79
55 57 2.477176 CGGCTCAGTCTCTCGGAGG 61.477 68.421 4.96 0.00 38.48 4.30
59 61 2.780094 ATGCCGGCTCAGTCTCTCG 61.780 63.158 29.70 0.00 0.00 4.04
105 107 1.640604 CGACTACGAGGCGTCTACC 59.359 63.158 4.69 0.00 42.99 3.18
145 147 4.007659 AGGATTTTCGGTGATAAGCGTTT 58.992 39.130 0.75 0.00 0.00 3.60
181 183 9.730420 GTTTAAATCGTGGTGCTCATATTTATT 57.270 29.630 0.00 0.00 31.83 1.40
188 190 4.579869 AGAGTTTAAATCGTGGTGCTCAT 58.420 39.130 0.00 0.00 0.00 2.90
190 192 4.329256 GGTAGAGTTTAAATCGTGGTGCTC 59.671 45.833 0.00 0.00 0.00 4.26
198 200 4.110482 CTCACCCGGTAGAGTTTAAATCG 58.890 47.826 11.22 0.00 0.00 3.34
215 217 1.867363 AGGACAGTGGTATCCTCACC 58.133 55.000 0.00 0.00 41.83 4.02
220 222 2.699321 GGTTAGGAGGACAGTGGTATCC 59.301 54.545 0.00 0.00 34.60 2.59
221 223 3.371965 TGGTTAGGAGGACAGTGGTATC 58.628 50.000 0.00 0.00 0.00 2.24
222 224 3.484953 TGGTTAGGAGGACAGTGGTAT 57.515 47.619 0.00 0.00 0.00 2.73
223 225 3.371965 GATGGTTAGGAGGACAGTGGTA 58.628 50.000 0.00 0.00 0.00 3.25
224 226 2.188817 GATGGTTAGGAGGACAGTGGT 58.811 52.381 0.00 0.00 0.00 4.16
225 227 1.137086 CGATGGTTAGGAGGACAGTGG 59.863 57.143 0.00 0.00 0.00 4.00
226 228 1.471676 GCGATGGTTAGGAGGACAGTG 60.472 57.143 0.00 0.00 0.00 3.66
227 229 0.824759 GCGATGGTTAGGAGGACAGT 59.175 55.000 0.00 0.00 0.00 3.55
228 230 0.824109 TGCGATGGTTAGGAGGACAG 59.176 55.000 0.00 0.00 0.00 3.51
229 231 1.412710 GATGCGATGGTTAGGAGGACA 59.587 52.381 0.00 0.00 0.00 4.02
230 232 1.412710 TGATGCGATGGTTAGGAGGAC 59.587 52.381 0.00 0.00 0.00 3.85
231 233 1.412710 GTGATGCGATGGTTAGGAGGA 59.587 52.381 0.00 0.00 0.00 3.71
232 234 1.138859 TGTGATGCGATGGTTAGGAGG 59.861 52.381 0.00 0.00 0.00 4.30
233 235 2.602257 TGTGATGCGATGGTTAGGAG 57.398 50.000 0.00 0.00 0.00 3.69
234 236 3.558931 ATTGTGATGCGATGGTTAGGA 57.441 42.857 0.00 0.00 0.00 2.94
235 237 4.637483 AAATTGTGATGCGATGGTTAGG 57.363 40.909 0.00 0.00 0.00 2.69
236 238 6.363577 ACTAAATTGTGATGCGATGGTTAG 57.636 37.500 0.00 0.00 0.00 2.34
237 239 6.550843 CAACTAAATTGTGATGCGATGGTTA 58.449 36.000 0.00 0.00 33.20 2.85
238 240 5.401550 CAACTAAATTGTGATGCGATGGTT 58.598 37.500 0.00 0.00 33.20 3.67
261 263 5.502544 GCATACAACGTCTAGATTTCTTGGC 60.503 44.000 0.00 0.00 0.00 4.52
267 269 7.010552 GTGAAGATGCATACAACGTCTAGATTT 59.989 37.037 0.00 0.00 33.06 2.17
276 278 1.267532 GCCGTGAAGATGCATACAACG 60.268 52.381 0.00 7.90 0.00 4.10
318 320 3.852939 GCAGACATCTGAGACTCTATGCG 60.853 52.174 13.15 7.81 46.59 4.73
324 326 3.523606 ATGTGCAGACATCTGAGACTC 57.476 47.619 13.15 0.00 46.59 3.36
325 327 3.514706 AGAATGTGCAGACATCTGAGACT 59.485 43.478 13.15 0.56 46.59 3.24
350 352 4.023536 GGAGAGTGCAACATTTTTAACGGA 60.024 41.667 0.00 0.00 41.43 4.69
376 378 2.251893 GTCATCGAAGACCACGAGAAC 58.748 52.381 9.62 0.00 42.51 3.01
378 380 1.468914 CTGTCATCGAAGACCACGAGA 59.531 52.381 17.41 0.00 42.51 4.04
403 405 1.268845 GCTCCAAGCTACGCTCTAGTC 60.269 57.143 0.00 0.00 38.25 2.59
458 460 3.990469 AGTGTTCATCTTAACAGAGCACG 59.010 43.478 0.00 0.00 44.72 5.34
2180 2268 4.393062 CACTTACGAAGGTGATGAAGCAAT 59.607 41.667 0.00 0.00 35.69 3.56
2194 2282 2.690786 GTGTATGGGCACACTTACGAA 58.309 47.619 0.00 0.00 44.41 3.85
2243 2331 7.166628 CAAATGTGGAGCTACTACGAATAAG 57.833 40.000 0.00 0.00 32.52 1.73
2261 2363 6.210584 AGGTGATTTATTCGGAAACCAAATGT 59.789 34.615 9.11 0.00 0.00 2.71
2313 2418 3.062099 CCTACACGACGATTGATTGGTTG 59.938 47.826 0.00 0.00 0.00 3.77
2315 2420 2.418197 CCCTACACGACGATTGATTGGT 60.418 50.000 0.00 0.00 0.00 3.67
2322 2427 0.734942 CGTTGCCCTACACGACGATT 60.735 55.000 0.00 0.00 45.74 3.34
2449 2626 4.641396 ACTTTCGGATGTGATTCAACTGA 58.359 39.130 0.00 0.00 33.43 3.41
2450 2627 5.362556 AACTTTCGGATGTGATTCAACTG 57.637 39.130 0.00 0.00 0.00 3.16
2451 2628 4.152402 CGAACTTTCGGATGTGATTCAACT 59.848 41.667 3.35 0.00 46.30 3.16
2452 2629 4.394795 CGAACTTTCGGATGTGATTCAAC 58.605 43.478 3.35 0.00 46.30 3.18
2453 2630 4.661993 CGAACTTTCGGATGTGATTCAA 57.338 40.909 3.35 0.00 46.30 2.69
2466 2643 1.327764 GCGATCCATGTCCGAACTTTC 59.672 52.381 0.00 0.00 0.00 2.62
2467 2644 1.369625 GCGATCCATGTCCGAACTTT 58.630 50.000 0.00 0.00 0.00 2.66
2468 2645 0.462047 GGCGATCCATGTCCGAACTT 60.462 55.000 0.00 0.00 0.00 2.66
2469 2646 1.144057 GGCGATCCATGTCCGAACT 59.856 57.895 0.00 0.00 0.00 3.01
2470 2647 1.153449 TGGCGATCCATGTCCGAAC 60.153 57.895 0.00 0.00 37.47 3.95
2471 2648 3.304251 TGGCGATCCATGTCCGAA 58.696 55.556 0.00 0.00 37.47 4.30
2481 2658 1.222115 GCACGGTAAGGATGGCGATC 61.222 60.000 0.00 0.00 0.00 3.69
2482 2659 1.227556 GCACGGTAAGGATGGCGAT 60.228 57.895 0.00 0.00 0.00 4.58
2483 2660 2.185867 GCACGGTAAGGATGGCGA 59.814 61.111 0.00 0.00 0.00 5.54
2484 2661 2.869503 AAGGCACGGTAAGGATGGCG 62.870 60.000 0.00 0.00 43.29 5.69
2485 2662 0.179468 TAAGGCACGGTAAGGATGGC 59.821 55.000 0.00 0.00 39.10 4.40
2486 2663 2.702592 TTAAGGCACGGTAAGGATGG 57.297 50.000 0.00 0.00 0.00 3.51
2487 2664 3.754323 TGTTTTAAGGCACGGTAAGGATG 59.246 43.478 0.00 0.00 0.00 3.51
2488 2665 4.023726 TGTTTTAAGGCACGGTAAGGAT 57.976 40.909 0.00 0.00 0.00 3.24
2489 2666 3.488778 TGTTTTAAGGCACGGTAAGGA 57.511 42.857 0.00 0.00 0.00 3.36
2490 2667 4.037089 AGTTTGTTTTAAGGCACGGTAAGG 59.963 41.667 0.00 0.00 0.00 2.69
2491 2668 5.008316 AGAGTTTGTTTTAAGGCACGGTAAG 59.992 40.000 0.00 0.00 0.00 2.34
2492 2669 4.883006 AGAGTTTGTTTTAAGGCACGGTAA 59.117 37.500 0.00 0.00 0.00 2.85
2493 2670 4.453751 AGAGTTTGTTTTAAGGCACGGTA 58.546 39.130 0.00 0.00 0.00 4.02
2494 2671 3.284617 AGAGTTTGTTTTAAGGCACGGT 58.715 40.909 0.00 0.00 0.00 4.83
2495 2672 3.982576 AGAGTTTGTTTTAAGGCACGG 57.017 42.857 0.00 0.00 0.00 4.94
2496 2673 3.485743 GCAAGAGTTTGTTTTAAGGCACG 59.514 43.478 0.00 0.00 36.65 5.34
2497 2674 3.802139 GGCAAGAGTTTGTTTTAAGGCAC 59.198 43.478 0.00 0.00 36.65 5.01
2498 2675 3.490078 CGGCAAGAGTTTGTTTTAAGGCA 60.490 43.478 0.00 0.00 36.65 4.75
2499 2676 3.049912 CGGCAAGAGTTTGTTTTAAGGC 58.950 45.455 0.00 0.00 36.65 4.35
2500 2677 4.561735 TCGGCAAGAGTTTGTTTTAAGG 57.438 40.909 0.00 0.00 36.65 2.69
2501 2678 5.519722 ACATCGGCAAGAGTTTGTTTTAAG 58.480 37.500 0.00 0.00 36.65 1.85
2502 2679 5.298276 AGACATCGGCAAGAGTTTGTTTTAA 59.702 36.000 0.00 0.00 36.65 1.52
2503 2680 4.819630 AGACATCGGCAAGAGTTTGTTTTA 59.180 37.500 0.00 0.00 36.65 1.52
2504 2681 3.632145 AGACATCGGCAAGAGTTTGTTTT 59.368 39.130 0.00 0.00 36.65 2.43
2505 2682 3.214328 AGACATCGGCAAGAGTTTGTTT 58.786 40.909 0.00 0.00 36.65 2.83
2506 2683 2.808543 GAGACATCGGCAAGAGTTTGTT 59.191 45.455 0.00 0.00 36.65 2.83
2507 2684 2.224281 TGAGACATCGGCAAGAGTTTGT 60.224 45.455 0.00 0.00 36.65 2.83
2508 2685 2.416747 TGAGACATCGGCAAGAGTTTG 58.583 47.619 0.00 0.00 37.36 2.93
2509 2686 2.839486 TGAGACATCGGCAAGAGTTT 57.161 45.000 0.00 0.00 0.00 2.66
2510 2687 2.625737 CATGAGACATCGGCAAGAGTT 58.374 47.619 0.00 0.00 0.00 3.01
2511 2688 1.741732 GCATGAGACATCGGCAAGAGT 60.742 52.381 0.00 0.00 0.00 3.24
2512 2689 0.935898 GCATGAGACATCGGCAAGAG 59.064 55.000 0.00 0.00 0.00 2.85
2513 2690 0.538584 AGCATGAGACATCGGCAAGA 59.461 50.000 0.00 0.00 32.43 3.02
2514 2691 2.229675 TAGCATGAGACATCGGCAAG 57.770 50.000 0.00 0.00 32.43 4.01
2515 2692 2.279741 GTTAGCATGAGACATCGGCAA 58.720 47.619 0.00 0.00 32.43 4.52
2516 2693 1.473257 GGTTAGCATGAGACATCGGCA 60.473 52.381 0.00 0.00 32.43 5.69
2517 2694 1.221414 GGTTAGCATGAGACATCGGC 58.779 55.000 0.00 0.00 0.00 5.54
2518 2695 2.477825 CTGGTTAGCATGAGACATCGG 58.522 52.381 0.00 0.00 0.00 4.18
2519 2696 2.477825 CCTGGTTAGCATGAGACATCG 58.522 52.381 0.00 0.00 0.00 3.84
2520 2697 2.216898 GCCTGGTTAGCATGAGACATC 58.783 52.381 0.00 0.00 0.00 3.06
2521 2698 1.133976 GGCCTGGTTAGCATGAGACAT 60.134 52.381 0.00 0.00 0.00 3.06
2522 2699 0.253044 GGCCTGGTTAGCATGAGACA 59.747 55.000 0.00 0.00 0.00 3.41
2523 2700 0.811616 CGGCCTGGTTAGCATGAGAC 60.812 60.000 0.00 0.00 0.00 3.36
2524 2701 1.522092 CGGCCTGGTTAGCATGAGA 59.478 57.895 0.00 0.00 0.00 3.27
2525 2702 1.524621 CCGGCCTGGTTAGCATGAG 60.525 63.158 0.00 0.00 0.00 2.90
2526 2703 2.589540 CCGGCCTGGTTAGCATGA 59.410 61.111 0.00 0.00 0.00 3.07
2527 2704 2.516930 CCCGGCCTGGTTAGCATG 60.517 66.667 4.74 0.00 35.15 4.06
2528 2705 2.612493 AACCCGGCCTGGTTAGCAT 61.612 57.895 28.38 5.68 46.70 3.79
2529 2706 3.253838 AACCCGGCCTGGTTAGCA 61.254 61.111 28.38 0.00 46.70 3.49
2544 2721 3.853698 TACAGCCGGCACCCCAAAC 62.854 63.158 31.54 0.00 0.00 2.93
2545 2722 3.561120 CTACAGCCGGCACCCCAAA 62.561 63.158 31.54 5.31 0.00 3.28
2546 2723 4.028490 CTACAGCCGGCACCCCAA 62.028 66.667 31.54 6.48 0.00 4.12
2548 2725 3.480133 ATCTACAGCCGGCACCCC 61.480 66.667 31.54 0.00 0.00 4.95
2549 2726 2.203070 CATCTACAGCCGGCACCC 60.203 66.667 31.54 0.00 0.00 4.61
2550 2727 2.897350 GCATCTACAGCCGGCACC 60.897 66.667 31.54 0.00 0.00 5.01
2551 2728 2.897350 GGCATCTACAGCCGGCAC 60.897 66.667 31.54 6.70 43.15 5.01
2557 2734 1.616374 GGACTAGGAGGCATCTACAGC 59.384 57.143 0.00 0.00 0.00 4.40
2558 2735 2.625790 GTGGACTAGGAGGCATCTACAG 59.374 54.545 0.00 0.00 0.00 2.74
2559 2736 2.024369 TGTGGACTAGGAGGCATCTACA 60.024 50.000 0.00 0.00 31.06 2.74
2560 2737 2.667470 TGTGGACTAGGAGGCATCTAC 58.333 52.381 0.00 0.00 0.00 2.59
2561 2738 3.398318 TTGTGGACTAGGAGGCATCTA 57.602 47.619 0.00 0.00 0.00 1.98
2562 2739 2.254152 TTGTGGACTAGGAGGCATCT 57.746 50.000 0.00 0.00 0.00 2.90
2563 2740 3.350219 TTTTGTGGACTAGGAGGCATC 57.650 47.619 0.00 0.00 0.00 3.91
2564 2741 3.525199 AGATTTTGTGGACTAGGAGGCAT 59.475 43.478 0.00 0.00 0.00 4.40
2565 2742 2.912956 AGATTTTGTGGACTAGGAGGCA 59.087 45.455 0.00 0.00 0.00 4.75
2566 2743 3.055094 TCAGATTTTGTGGACTAGGAGGC 60.055 47.826 0.00 0.00 0.00 4.70
2567 2744 4.826274 TCAGATTTTGTGGACTAGGAGG 57.174 45.455 0.00 0.00 0.00 4.30
2568 2745 5.181748 CCTTCAGATTTTGTGGACTAGGAG 58.818 45.833 0.00 0.00 0.00 3.69
2569 2746 4.565652 GCCTTCAGATTTTGTGGACTAGGA 60.566 45.833 0.00 0.00 0.00 2.94
2570 2747 3.691609 GCCTTCAGATTTTGTGGACTAGG 59.308 47.826 0.00 0.00 0.00 3.02
2571 2748 4.394300 CAGCCTTCAGATTTTGTGGACTAG 59.606 45.833 0.00 0.00 0.00 2.57
2572 2749 4.326826 CAGCCTTCAGATTTTGTGGACTA 58.673 43.478 0.00 0.00 0.00 2.59
2573 2750 3.152341 CAGCCTTCAGATTTTGTGGACT 58.848 45.455 0.00 0.00 0.00 3.85
2574 2751 2.352127 GCAGCCTTCAGATTTTGTGGAC 60.352 50.000 0.00 0.00 0.00 4.02
2575 2752 1.888512 GCAGCCTTCAGATTTTGTGGA 59.111 47.619 0.00 0.00 0.00 4.02
2576 2753 1.614903 TGCAGCCTTCAGATTTTGTGG 59.385 47.619 0.00 0.00 0.00 4.17
2577 2754 3.587797 ATGCAGCCTTCAGATTTTGTG 57.412 42.857 0.00 0.00 0.00 3.33
2578 2755 4.612264 AAATGCAGCCTTCAGATTTTGT 57.388 36.364 0.00 0.00 0.00 2.83
2579 2756 7.605410 AATAAAATGCAGCCTTCAGATTTTG 57.395 32.000 8.44 0.00 30.78 2.44
2580 2757 9.895138 ATAAATAAAATGCAGCCTTCAGATTTT 57.105 25.926 0.00 4.74 32.46 1.82
2581 2758 9.895138 AATAAATAAAATGCAGCCTTCAGATTT 57.105 25.926 0.00 0.00 0.00 2.17
2582 2759 9.895138 AAATAAATAAAATGCAGCCTTCAGATT 57.105 25.926 0.00 0.00 0.00 2.40
2604 2781 9.409312 TCTCACGACTCGTTTGTAAAATAAATA 57.591 29.630 0.00 0.00 38.32 1.40
2605 2782 8.301730 TCTCACGACTCGTTTGTAAAATAAAT 57.698 30.769 0.00 0.00 38.32 1.40
2606 2783 7.697352 TCTCACGACTCGTTTGTAAAATAAA 57.303 32.000 0.00 0.00 38.32 1.40
2607 2784 7.595875 TCATCTCACGACTCGTTTGTAAAATAA 59.404 33.333 0.00 0.00 38.32 1.40
2608 2785 7.085746 TCATCTCACGACTCGTTTGTAAAATA 58.914 34.615 0.00 0.00 38.32 1.40
2609 2786 5.924254 TCATCTCACGACTCGTTTGTAAAAT 59.076 36.000 0.00 0.00 38.32 1.82
2610 2787 5.283294 TCATCTCACGACTCGTTTGTAAAA 58.717 37.500 0.00 0.00 38.32 1.52
2611 2788 4.862350 TCATCTCACGACTCGTTTGTAAA 58.138 39.130 0.00 0.00 38.32 2.01
2612 2789 4.473199 CTCATCTCACGACTCGTTTGTAA 58.527 43.478 0.00 0.00 38.32 2.41
2613 2790 3.669824 GCTCATCTCACGACTCGTTTGTA 60.670 47.826 0.00 0.00 38.32 2.41
2614 2791 2.922758 GCTCATCTCACGACTCGTTTGT 60.923 50.000 0.00 0.00 38.32 2.83
2615 2792 1.651138 GCTCATCTCACGACTCGTTTG 59.349 52.381 0.00 0.00 38.32 2.93
2616 2793 1.729472 CGCTCATCTCACGACTCGTTT 60.729 52.381 0.00 0.00 38.32 3.60
2617 2794 0.179187 CGCTCATCTCACGACTCGTT 60.179 55.000 0.00 0.00 38.32 3.85
2618 2795 1.425825 CGCTCATCTCACGACTCGT 59.574 57.895 0.00 0.00 42.36 4.18
2619 2796 1.297967 CCGCTCATCTCACGACTCG 60.298 63.158 0.00 0.00 0.00 4.18
2620 2797 0.171455 AACCGCTCATCTCACGACTC 59.829 55.000 0.00 0.00 0.00 3.36
2621 2798 0.603569 AAACCGCTCATCTCACGACT 59.396 50.000 0.00 0.00 0.00 4.18
2622 2799 0.992802 GAAACCGCTCATCTCACGAC 59.007 55.000 0.00 0.00 0.00 4.34
2623 2800 0.601057 TGAAACCGCTCATCTCACGA 59.399 50.000 0.00 0.00 0.00 4.35
2624 2801 0.994995 CTGAAACCGCTCATCTCACG 59.005 55.000 0.00 0.00 0.00 4.35
2625 2802 2.086054 ACTGAAACCGCTCATCTCAC 57.914 50.000 0.00 0.00 0.00 3.51
2626 2803 3.849911 CTTACTGAAACCGCTCATCTCA 58.150 45.455 0.00 0.00 0.00 3.27
2627 2804 2.605366 GCTTACTGAAACCGCTCATCTC 59.395 50.000 0.00 0.00 0.00 2.75
2628 2805 2.028112 TGCTTACTGAAACCGCTCATCT 60.028 45.455 0.00 0.00 0.00 2.90
2629 2806 2.346803 TGCTTACTGAAACCGCTCATC 58.653 47.619 0.00 0.00 0.00 2.92
2630 2807 2.350522 CTGCTTACTGAAACCGCTCAT 58.649 47.619 0.00 0.00 0.00 2.90
2631 2808 1.608025 CCTGCTTACTGAAACCGCTCA 60.608 52.381 0.00 0.00 0.00 4.26
2632 2809 1.079503 CCTGCTTACTGAAACCGCTC 58.920 55.000 0.00 0.00 0.00 5.03
2633 2810 0.955919 GCCTGCTTACTGAAACCGCT 60.956 55.000 0.00 0.00 0.00 5.52
2634 2811 1.502190 GCCTGCTTACTGAAACCGC 59.498 57.895 0.00 0.00 0.00 5.68
2635 2812 1.635663 CCGCCTGCTTACTGAAACCG 61.636 60.000 0.00 0.00 0.00 4.44
2636 2813 0.321298 TCCGCCTGCTTACTGAAACC 60.321 55.000 0.00 0.00 0.00 3.27
2637 2814 1.079503 CTCCGCCTGCTTACTGAAAC 58.920 55.000 0.00 0.00 0.00 2.78
2638 2815 0.036388 CCTCCGCCTGCTTACTGAAA 60.036 55.000 0.00 0.00 0.00 2.69
2639 2816 1.596934 CCTCCGCCTGCTTACTGAA 59.403 57.895 0.00 0.00 0.00 3.02
2640 2817 3.019003 GCCTCCGCCTGCTTACTGA 62.019 63.158 0.00 0.00 0.00 3.41
2641 2818 2.512515 GCCTCCGCCTGCTTACTG 60.513 66.667 0.00 0.00 0.00 2.74
2642 2819 4.148825 CGCCTCCGCCTGCTTACT 62.149 66.667 0.00 0.00 0.00 2.24
2648 2825 4.598894 CATCTCCGCCTCCGCCTG 62.599 72.222 0.00 0.00 0.00 4.85
2650 2827 4.899239 CACATCTCCGCCTCCGCC 62.899 72.222 0.00 0.00 0.00 6.13
2651 2828 4.899239 CCACATCTCCGCCTCCGC 62.899 72.222 0.00 0.00 0.00 5.54
2652 2829 2.521958 AAACCACATCTCCGCCTCCG 62.522 60.000 0.00 0.00 0.00 4.63
2653 2830 0.322546 AAAACCACATCTCCGCCTCC 60.323 55.000 0.00 0.00 0.00 4.30
2654 2831 1.534729 AAAAACCACATCTCCGCCTC 58.465 50.000 0.00 0.00 0.00 4.70
2655 2832 3.745723 AAAAACCACATCTCCGCCT 57.254 47.368 0.00 0.00 0.00 5.52
2670 2847 3.972276 GCCGCACGCTCCCAAAAA 61.972 61.111 0.00 0.00 0.00 1.94
2699 2876 4.735132 TGAAGAACGCCGCCGAGG 62.735 66.667 0.00 0.00 44.97 4.63
2700 2877 3.479269 GTGAAGAACGCCGCCGAG 61.479 66.667 0.00 0.00 38.29 4.63
2701 2878 3.986006 AGTGAAGAACGCCGCCGA 61.986 61.111 0.00 0.00 38.29 5.54
2702 2879 3.777925 CAGTGAAGAACGCCGCCG 61.778 66.667 0.00 0.00 41.14 6.46
2703 2880 4.090057 GCAGTGAAGAACGCCGCC 62.090 66.667 0.00 0.00 0.00 6.13
2704 2881 4.430423 CGCAGTGAAGAACGCCGC 62.430 66.667 0.00 0.00 0.00 6.53
2705 2882 3.777925 CCGCAGTGAAGAACGCCG 61.778 66.667 0.00 0.00 0.00 6.46
2706 2883 3.423154 CCCGCAGTGAAGAACGCC 61.423 66.667 0.00 0.00 0.00 5.68
2707 2884 2.665185 ACCCGCAGTGAAGAACGC 60.665 61.111 0.00 0.00 0.00 4.84
2715 2892 2.047844 CAGAGACCACCCGCAGTG 60.048 66.667 0.00 0.00 46.83 3.66
2716 2893 3.314331 CCAGAGACCACCCGCAGT 61.314 66.667 0.00 0.00 0.00 4.40
2717 2894 2.883828 AACCAGAGACCACCCGCAG 61.884 63.158 0.00 0.00 0.00 5.18
2718 2895 2.847234 AACCAGAGACCACCCGCA 60.847 61.111 0.00 0.00 0.00 5.69
2719 2896 2.358737 CAACCAGAGACCACCCGC 60.359 66.667 0.00 0.00 0.00 6.13
2720 2897 1.301716 CACAACCAGAGACCACCCG 60.302 63.158 0.00 0.00 0.00 5.28
2721 2898 1.600916 GCACAACCAGAGACCACCC 60.601 63.158 0.00 0.00 0.00 4.61
2722 2899 0.603975 GAGCACAACCAGAGACCACC 60.604 60.000 0.00 0.00 0.00 4.61
2723 2900 0.946221 CGAGCACAACCAGAGACCAC 60.946 60.000 0.00 0.00 0.00 4.16
2724 2901 1.367471 CGAGCACAACCAGAGACCA 59.633 57.895 0.00 0.00 0.00 4.02
2725 2902 1.374758 CCGAGCACAACCAGAGACC 60.375 63.158 0.00 0.00 0.00 3.85
2726 2903 0.389166 CTCCGAGCACAACCAGAGAC 60.389 60.000 0.00 0.00 0.00 3.36
2727 2904 1.967535 CTCCGAGCACAACCAGAGA 59.032 57.895 0.00 0.00 0.00 3.10
2728 2905 1.739562 GCTCCGAGCACAACCAGAG 60.740 63.158 15.78 0.00 41.89 3.35
2729 2906 2.343758 GCTCCGAGCACAACCAGA 59.656 61.111 15.78 0.00 41.89 3.86
2730 2907 2.743928 GGCTCCGAGCACAACCAG 60.744 66.667 21.76 0.00 44.75 4.00
2731 2908 4.329545 GGGCTCCGAGCACAACCA 62.330 66.667 21.76 0.00 45.95 3.67
2743 2920 3.839432 CGAACGGAGGAGGGGCTC 61.839 72.222 0.00 0.00 0.00 4.70
2744 2921 3.899545 TTCGAACGGAGGAGGGGCT 62.900 63.158 0.00 0.00 0.00 5.19
2745 2922 2.646117 GATTCGAACGGAGGAGGGGC 62.646 65.000 0.00 0.00 0.00 5.80
2746 2923 1.043673 AGATTCGAACGGAGGAGGGG 61.044 60.000 0.00 0.00 0.00 4.79
2747 2924 0.103208 CAGATTCGAACGGAGGAGGG 59.897 60.000 0.00 0.00 0.00 4.30
2748 2925 0.103208 CCAGATTCGAACGGAGGAGG 59.897 60.000 0.00 0.00 0.00 4.30
2749 2926 0.103208 CCCAGATTCGAACGGAGGAG 59.897 60.000 0.00 0.00 0.00 3.69
2750 2927 1.327690 CCCCAGATTCGAACGGAGGA 61.328 60.000 0.00 0.00 0.00 3.71
2751 2928 1.144057 CCCCAGATTCGAACGGAGG 59.856 63.158 0.00 0.00 0.00 4.30
2752 2929 1.144057 CCCCCAGATTCGAACGGAG 59.856 63.158 0.00 0.00 0.00 4.63
2753 2930 0.324552 TACCCCCAGATTCGAACGGA 60.325 55.000 0.00 0.00 0.00 4.69
2754 2931 0.538118 TTACCCCCAGATTCGAACGG 59.462 55.000 0.00 1.07 0.00 4.44
2755 2932 1.935933 CTTACCCCCAGATTCGAACG 58.064 55.000 0.00 0.00 0.00 3.95
2756 2933 1.664873 GCTTACCCCCAGATTCGAAC 58.335 55.000 0.00 0.00 0.00 3.95
2757 2934 0.544697 GGCTTACCCCCAGATTCGAA 59.455 55.000 0.00 0.00 0.00 3.71
2758 2935 0.619255 TGGCTTACCCCCAGATTCGA 60.619 55.000 0.00 0.00 33.59 3.71
2759 2936 0.474184 ATGGCTTACCCCCAGATTCG 59.526 55.000 0.00 0.00 35.48 3.34
2760 2937 1.479389 CCATGGCTTACCCCCAGATTC 60.479 57.143 0.00 0.00 35.48 2.52
2761 2938 0.557729 CCATGGCTTACCCCCAGATT 59.442 55.000 0.00 0.00 35.48 2.40
2762 2939 2.011617 GCCATGGCTTACCCCCAGAT 62.012 60.000 29.98 0.00 35.48 2.90
2763 2940 2.689691 GCCATGGCTTACCCCCAGA 61.690 63.158 29.98 0.00 35.48 3.86
2764 2941 2.123726 GCCATGGCTTACCCCCAG 60.124 66.667 29.98 0.00 35.48 4.45
2787 2964 4.436998 AGTCGCCGCCGAAGAAGG 62.437 66.667 0.00 0.00 46.34 3.46
2788 2965 2.881352 GAGTCGCCGCCGAAGAAG 60.881 66.667 0.00 0.00 46.34 2.85
2789 2966 3.626680 CTGAGTCGCCGCCGAAGAA 62.627 63.158 0.00 0.00 46.34 2.52
2790 2967 4.116328 CTGAGTCGCCGCCGAAGA 62.116 66.667 0.00 0.00 46.34 2.87
2809 2986 0.976073 AATTTCCTCTCTCCGCGGGA 60.976 55.000 27.83 20.03 0.00 5.14
2810 2987 0.811616 CAATTTCCTCTCTCCGCGGG 60.812 60.000 27.83 16.54 0.00 6.13
2811 2988 1.432270 GCAATTTCCTCTCTCCGCGG 61.432 60.000 22.12 22.12 0.00 6.46
2812 2989 0.740868 TGCAATTTCCTCTCTCCGCG 60.741 55.000 0.00 0.00 0.00 6.46
2813 2990 0.729690 GTGCAATTTCCTCTCTCCGC 59.270 55.000 0.00 0.00 0.00 5.54
2814 2991 2.099141 TGTGCAATTTCCTCTCTCCG 57.901 50.000 0.00 0.00 0.00 4.63
2815 2992 3.057245 GGTTTGTGCAATTTCCTCTCTCC 60.057 47.826 0.00 0.00 0.00 3.71
2816 2993 3.569701 TGGTTTGTGCAATTTCCTCTCTC 59.430 43.478 0.00 0.00 0.00 3.20
2817 2994 3.319122 GTGGTTTGTGCAATTTCCTCTCT 59.681 43.478 0.00 0.00 0.00 3.10
2818 2995 3.319122 AGTGGTTTGTGCAATTTCCTCTC 59.681 43.478 0.00 0.00 0.00 3.20
2819 2996 3.299503 AGTGGTTTGTGCAATTTCCTCT 58.700 40.909 0.00 0.00 0.00 3.69
2820 2997 3.733443 AGTGGTTTGTGCAATTTCCTC 57.267 42.857 0.00 0.00 0.00 3.71
2821 2998 4.649218 AGTAAGTGGTTTGTGCAATTTCCT 59.351 37.500 0.00 0.00 0.00 3.36
2822 2999 4.944048 AGTAAGTGGTTTGTGCAATTTCC 58.056 39.130 0.00 0.00 0.00 3.13
2823 3000 6.902224 AAAGTAAGTGGTTTGTGCAATTTC 57.098 33.333 0.00 0.00 0.00 2.17
2824 3001 6.093357 CCAAAAGTAAGTGGTTTGTGCAATTT 59.907 34.615 0.00 0.00 31.66 1.82
2825 3002 5.584251 CCAAAAGTAAGTGGTTTGTGCAATT 59.416 36.000 0.00 0.00 31.66 2.32
2826 3003 5.115480 CCAAAAGTAAGTGGTTTGTGCAAT 58.885 37.500 0.00 0.00 31.66 3.56
2827 3004 4.021016 ACCAAAAGTAAGTGGTTTGTGCAA 60.021 37.500 0.00 0.00 46.17 4.08
2828 3005 3.511934 ACCAAAAGTAAGTGGTTTGTGCA 59.488 39.130 0.00 0.00 46.17 4.57
2829 3006 3.862845 CACCAAAAGTAAGTGGTTTGTGC 59.137 43.478 0.00 0.00 46.17 4.57
2830 3007 3.862845 GCACCAAAAGTAAGTGGTTTGTG 59.137 43.478 0.00 0.00 46.17 3.33
2831 3008 3.767131 AGCACCAAAAGTAAGTGGTTTGT 59.233 39.130 0.00 0.00 46.17 2.83
2832 3009 4.385358 AGCACCAAAAGTAAGTGGTTTG 57.615 40.909 0.00 0.00 46.17 2.93
2833 3010 5.198207 ACTAGCACCAAAAGTAAGTGGTTT 58.802 37.500 0.00 0.00 46.17 3.27
2834 3011 4.788679 ACTAGCACCAAAAGTAAGTGGTT 58.211 39.130 0.00 0.00 46.17 3.67
2836 3013 5.519722 CAAACTAGCACCAAAAGTAAGTGG 58.480 41.667 0.00 0.00 41.00 4.00
2837 3014 4.976116 GCAAACTAGCACCAAAAGTAAGTG 59.024 41.667 0.00 0.00 34.58 3.16
2838 3015 4.642885 TGCAAACTAGCACCAAAAGTAAGT 59.357 37.500 0.00 0.00 40.11 2.24
2839 3016 5.181690 TGCAAACTAGCACCAAAAGTAAG 57.818 39.130 0.00 0.00 40.11 2.34
2850 3027 1.946768 GGTGTTCTGTGCAAACTAGCA 59.053 47.619 0.00 0.00 43.35 3.49
2851 3028 1.266989 GGGTGTTCTGTGCAAACTAGC 59.733 52.381 0.00 0.00 0.00 3.42
2852 3029 2.290641 GTGGGTGTTCTGTGCAAACTAG 59.709 50.000 0.00 0.00 0.00 2.57
2853 3030 2.092646 AGTGGGTGTTCTGTGCAAACTA 60.093 45.455 0.00 0.00 0.00 2.24
2854 3031 1.102978 GTGGGTGTTCTGTGCAAACT 58.897 50.000 0.00 0.00 0.00 2.66
2855 3032 1.102978 AGTGGGTGTTCTGTGCAAAC 58.897 50.000 0.00 0.00 0.00 2.93
2856 3033 1.846007 AAGTGGGTGTTCTGTGCAAA 58.154 45.000 0.00 0.00 0.00 3.68
2857 3034 1.846007 AAAGTGGGTGTTCTGTGCAA 58.154 45.000 0.00 0.00 0.00 4.08
2858 3035 2.294074 GTAAAGTGGGTGTTCTGTGCA 58.706 47.619 0.00 0.00 0.00 4.57
2859 3036 2.294074 TGTAAAGTGGGTGTTCTGTGC 58.706 47.619 0.00 0.00 0.00 4.57
2860 3037 3.882888 ACATGTAAAGTGGGTGTTCTGTG 59.117 43.478 0.00 0.00 0.00 3.66
2861 3038 4.164843 ACATGTAAAGTGGGTGTTCTGT 57.835 40.909 0.00 0.00 0.00 3.41
2862 3039 5.514274 AAACATGTAAAGTGGGTGTTCTG 57.486 39.130 0.00 0.00 32.32 3.02
2863 3040 5.420739 ACAAAACATGTAAAGTGGGTGTTCT 59.579 36.000 0.00 0.00 41.63 3.01
2864 3041 5.656480 ACAAAACATGTAAAGTGGGTGTTC 58.344 37.500 0.00 0.00 41.63 3.18
2865 3042 5.669164 ACAAAACATGTAAAGTGGGTGTT 57.331 34.783 0.00 0.00 41.63 3.32
2866 3043 5.415221 CAACAAAACATGTAAAGTGGGTGT 58.585 37.500 0.00 0.00 42.99 4.16
2867 3044 4.269844 GCAACAAAACATGTAAAGTGGGTG 59.730 41.667 0.00 0.00 42.99 4.61
2868 3045 4.081420 TGCAACAAAACATGTAAAGTGGGT 60.081 37.500 0.00 0.00 42.99 4.51
2869 3046 4.437239 TGCAACAAAACATGTAAAGTGGG 58.563 39.130 0.00 0.00 42.99 4.61
2870 3047 7.706281 TTATGCAACAAAACATGTAAAGTGG 57.294 32.000 0.00 0.00 42.99 4.00
2871 3048 9.419737 GTTTTATGCAACAAAACATGTAAAGTG 57.580 29.630 24.28 0.00 42.99 3.16
2872 3049 9.155975 TGTTTTATGCAACAAAACATGTAAAGT 57.844 25.926 26.43 0.00 45.89 2.66
2881 3058 9.943163 AAAATATGGTGTTTTATGCAACAAAAC 57.057 25.926 23.23 23.23 43.18 2.43
2882 3059 9.941664 CAAAATATGGTGTTTTATGCAACAAAA 57.058 25.926 0.00 0.00 38.40 2.44
2883 3060 8.562892 CCAAAATATGGTGTTTTATGCAACAAA 58.437 29.630 0.00 0.00 44.85 2.83
2884 3061 8.092521 CCAAAATATGGTGTTTTATGCAACAA 57.907 30.769 0.00 0.00 44.85 2.83
2885 3062 7.664082 CCAAAATATGGTGTTTTATGCAACA 57.336 32.000 0.00 0.00 44.85 3.33
2919 3096 9.764363 CAAATGATGTATTAGACCTAGCTACAA 57.236 33.333 0.00 0.00 0.00 2.41
2920 3097 9.143155 TCAAATGATGTATTAGACCTAGCTACA 57.857 33.333 0.00 0.00 0.00 2.74
2921 3098 9.982651 TTCAAATGATGTATTAGACCTAGCTAC 57.017 33.333 0.00 0.00 0.00 3.58
2923 3100 9.499479 CATTCAAATGATGTATTAGACCTAGCT 57.501 33.333 0.00 0.00 38.70 3.32
2924 3101 9.277783 ACATTCAAATGATGTATTAGACCTAGC 57.722 33.333 9.62 0.00 39.67 3.42
2927 3104 9.466497 AACACATTCAAATGATGTATTAGACCT 57.534 29.630 9.62 0.00 39.67 3.85
2928 3105 9.507280 CAACACATTCAAATGATGTATTAGACC 57.493 33.333 9.62 0.00 39.67 3.85
2933 3110 9.361315 CATGTCAACACATTCAAATGATGTATT 57.639 29.630 9.62 0.00 40.66 1.89
2934 3111 8.741841 TCATGTCAACACATTCAAATGATGTAT 58.258 29.630 9.62 0.00 40.66 2.29
2935 3112 8.108551 TCATGTCAACACATTCAAATGATGTA 57.891 30.769 9.62 0.00 40.66 2.29
2936 3113 6.983984 TCATGTCAACACATTCAAATGATGT 58.016 32.000 9.62 7.26 40.66 3.06
2937 3114 8.474006 AATCATGTCAACACATTCAAATGATG 57.526 30.769 9.62 6.72 40.66 3.07
2938 3115 7.762615 GGAATCATGTCAACACATTCAAATGAT 59.237 33.333 9.62 0.00 40.66 2.45
2939 3116 7.039574 AGGAATCATGTCAACACATTCAAATGA 60.040 33.333 9.62 0.00 40.66 2.57
2940 3117 7.094631 AGGAATCATGTCAACACATTCAAATG 58.905 34.615 14.23 1.20 40.66 2.32
2941 3118 7.235935 AGGAATCATGTCAACACATTCAAAT 57.764 32.000 14.23 2.93 40.66 2.32
2942 3119 6.653526 AGGAATCATGTCAACACATTCAAA 57.346 33.333 14.23 0.00 40.66 2.69
2943 3120 7.230309 TGTTAGGAATCATGTCAACACATTCAA 59.770 33.333 14.23 3.80 40.66 2.69
2944 3121 6.714356 TGTTAGGAATCATGTCAACACATTCA 59.286 34.615 14.23 0.00 40.66 2.57
2945 3122 7.094634 ACTGTTAGGAATCATGTCAACACATTC 60.095 37.037 0.00 7.62 40.66 2.67
2946 3123 6.716628 ACTGTTAGGAATCATGTCAACACATT 59.283 34.615 0.00 0.00 40.66 2.71
2947 3124 6.149973 CACTGTTAGGAATCATGTCAACACAT 59.850 38.462 0.00 0.00 44.72 3.21
2948 3125 5.469760 CACTGTTAGGAATCATGTCAACACA 59.530 40.000 0.00 0.00 36.78 3.72
2949 3126 5.106555 CCACTGTTAGGAATCATGTCAACAC 60.107 44.000 0.00 0.00 0.00 3.32
2950 3127 5.003160 CCACTGTTAGGAATCATGTCAACA 58.997 41.667 0.00 0.00 0.00 3.33
2951 3128 4.396166 CCCACTGTTAGGAATCATGTCAAC 59.604 45.833 0.00 0.00 0.00 3.18
2952 3129 4.042809 ACCCACTGTTAGGAATCATGTCAA 59.957 41.667 0.77 0.00 0.00 3.18
2953 3130 3.587061 ACCCACTGTTAGGAATCATGTCA 59.413 43.478 0.77 0.00 0.00 3.58
2954 3131 4.080863 AGACCCACTGTTAGGAATCATGTC 60.081 45.833 0.77 0.00 0.00 3.06
2955 3132 3.846588 AGACCCACTGTTAGGAATCATGT 59.153 43.478 0.77 0.00 0.00 3.21
2956 3133 4.494091 AGACCCACTGTTAGGAATCATG 57.506 45.455 0.77 0.00 0.00 3.07
2957 3134 5.281314 ACTAGACCCACTGTTAGGAATCAT 58.719 41.667 0.00 0.00 0.00 2.45
2958 3135 4.684724 ACTAGACCCACTGTTAGGAATCA 58.315 43.478 0.00 0.00 0.00 2.57
2959 3136 5.678955 AACTAGACCCACTGTTAGGAATC 57.321 43.478 0.00 0.00 0.00 2.52
2960 3137 5.309806 ACAAACTAGACCCACTGTTAGGAAT 59.690 40.000 0.00 0.00 0.00 3.01
2961 3138 4.657039 ACAAACTAGACCCACTGTTAGGAA 59.343 41.667 0.00 0.00 0.00 3.36
2962 3139 4.228824 ACAAACTAGACCCACTGTTAGGA 58.771 43.478 0.00 0.00 0.00 2.94
2963 3140 4.618920 ACAAACTAGACCCACTGTTAGG 57.381 45.455 0.00 0.00 0.00 2.69
2964 3141 6.645415 CACTTACAAACTAGACCCACTGTTAG 59.355 42.308 0.00 0.00 0.00 2.34
2965 3142 6.518493 CACTTACAAACTAGACCCACTGTTA 58.482 40.000 0.00 0.00 0.00 2.41
2966 3143 5.365619 CACTTACAAACTAGACCCACTGTT 58.634 41.667 0.00 0.00 0.00 3.16
2967 3144 4.742743 GCACTTACAAACTAGACCCACTGT 60.743 45.833 0.00 0.00 0.00 3.55
2968 3145 3.746492 GCACTTACAAACTAGACCCACTG 59.254 47.826 0.00 0.00 0.00 3.66
2969 3146 3.389983 TGCACTTACAAACTAGACCCACT 59.610 43.478 0.00 0.00 0.00 4.00
2970 3147 3.735591 TGCACTTACAAACTAGACCCAC 58.264 45.455 0.00 0.00 0.00 4.61
2971 3148 4.575885 GATGCACTTACAAACTAGACCCA 58.424 43.478 0.00 0.00 0.00 4.51
2972 3149 3.617263 CGATGCACTTACAAACTAGACCC 59.383 47.826 0.00 0.00 0.00 4.46
2973 3150 3.617263 CCGATGCACTTACAAACTAGACC 59.383 47.826 0.00 0.00 0.00 3.85
2974 3151 4.091509 CACCGATGCACTTACAAACTAGAC 59.908 45.833 0.00 0.00 0.00 2.59
2975 3152 4.021807 TCACCGATGCACTTACAAACTAGA 60.022 41.667 0.00 0.00 0.00 2.43
2976 3153 4.091509 GTCACCGATGCACTTACAAACTAG 59.908 45.833 0.00 0.00 0.00 2.57
2977 3154 3.991773 GTCACCGATGCACTTACAAACTA 59.008 43.478 0.00 0.00 0.00 2.24
2978 3155 2.806244 GTCACCGATGCACTTACAAACT 59.194 45.455 0.00 0.00 0.00 2.66
2979 3156 2.546368 TGTCACCGATGCACTTACAAAC 59.454 45.455 0.00 0.00 0.00 2.93
2980 3157 2.839975 TGTCACCGATGCACTTACAAA 58.160 42.857 0.00 0.00 0.00 2.83
2981 3158 2.535012 TGTCACCGATGCACTTACAA 57.465 45.000 0.00 0.00 0.00 2.41
2982 3159 2.535012 TTGTCACCGATGCACTTACA 57.465 45.000 0.00 0.00 0.00 2.41
2983 3160 3.889196 TTTTGTCACCGATGCACTTAC 57.111 42.857 0.00 0.00 0.00 2.34
3002 3179 5.736951 TGGCTAATAATGTGGCTGTTTTT 57.263 34.783 0.00 0.00 0.00 1.94
3003 3180 5.736951 TTGGCTAATAATGTGGCTGTTTT 57.263 34.783 0.00 0.00 0.00 2.43
3004 3181 5.937975 ATTGGCTAATAATGTGGCTGTTT 57.062 34.783 0.00 0.00 0.00 2.83
3005 3182 6.833416 TCTTATTGGCTAATAATGTGGCTGTT 59.167 34.615 14.75 0.00 37.92 3.16
3006 3183 6.364701 TCTTATTGGCTAATAATGTGGCTGT 58.635 36.000 14.75 0.00 37.92 4.40
3007 3184 6.882610 TCTTATTGGCTAATAATGTGGCTG 57.117 37.500 14.75 3.20 37.92 4.85
3008 3185 7.013655 CAGTTCTTATTGGCTAATAATGTGGCT 59.986 37.037 14.75 7.32 37.92 4.75
3009 3186 7.141363 CAGTTCTTATTGGCTAATAATGTGGC 58.859 38.462 14.75 5.53 37.92 5.01
3010 3187 7.141363 GCAGTTCTTATTGGCTAATAATGTGG 58.859 38.462 14.75 4.79 37.92 4.17
3011 3188 7.141363 GGCAGTTCTTATTGGCTAATAATGTG 58.859 38.462 14.75 10.83 37.92 3.21
3012 3189 6.833416 TGGCAGTTCTTATTGGCTAATAATGT 59.167 34.615 14.75 0.00 37.92 2.71
3013 3190 7.275888 TGGCAGTTCTTATTGGCTAATAATG 57.724 36.000 14.75 11.35 37.92 1.90
3014 3191 7.896383 TTGGCAGTTCTTATTGGCTAATAAT 57.104 32.000 14.75 0.00 37.92 1.28
3015 3192 7.896383 ATTGGCAGTTCTTATTGGCTAATAA 57.104 32.000 13.82 13.82 40.23 1.40
3016 3193 9.231297 GATATTGGCAGTTCTTATTGGCTAATA 57.769 33.333 0.00 0.00 40.23 0.98
3017 3194 7.946776 AGATATTGGCAGTTCTTATTGGCTAAT 59.053 33.333 0.00 0.00 40.23 1.73
3018 3195 7.290061 AGATATTGGCAGTTCTTATTGGCTAA 58.710 34.615 0.00 0.00 40.23 3.09
3019 3196 6.841601 AGATATTGGCAGTTCTTATTGGCTA 58.158 36.000 0.00 0.00 40.23 3.93
3020 3197 5.699143 AGATATTGGCAGTTCTTATTGGCT 58.301 37.500 0.00 0.00 40.23 4.75
3021 3198 5.532406 TGAGATATTGGCAGTTCTTATTGGC 59.468 40.000 0.00 0.00 40.02 4.52
3022 3199 6.543465 TGTGAGATATTGGCAGTTCTTATTGG 59.457 38.462 0.00 0.00 0.00 3.16
3023 3200 7.558161 TGTGAGATATTGGCAGTTCTTATTG 57.442 36.000 0.00 0.00 0.00 1.90
3024 3201 8.757982 ATTGTGAGATATTGGCAGTTCTTATT 57.242 30.769 0.00 0.00 0.00 1.40
3025 3202 8.757982 AATTGTGAGATATTGGCAGTTCTTAT 57.242 30.769 0.00 0.00 0.00 1.73
3026 3203 8.049117 AGAATTGTGAGATATTGGCAGTTCTTA 58.951 33.333 0.00 0.00 34.15 2.10
3027 3204 6.888632 AGAATTGTGAGATATTGGCAGTTCTT 59.111 34.615 0.00 0.00 34.15 2.52
3028 3205 6.421485 AGAATTGTGAGATATTGGCAGTTCT 58.579 36.000 0.00 0.00 33.41 3.01
3029 3206 6.690194 AGAATTGTGAGATATTGGCAGTTC 57.310 37.500 0.00 0.00 0.00 3.01
3030 3207 7.318141 CAAAGAATTGTGAGATATTGGCAGTT 58.682 34.615 0.00 0.00 0.00 3.16
3031 3208 6.626623 GCAAAGAATTGTGAGATATTGGCAGT 60.627 38.462 0.00 0.00 38.85 4.40
3032 3209 5.747197 GCAAAGAATTGTGAGATATTGGCAG 59.253 40.000 0.00 0.00 38.85 4.85
3033 3210 5.419788 AGCAAAGAATTGTGAGATATTGGCA 59.580 36.000 0.00 0.00 38.85 4.92
3034 3211 5.899299 AGCAAAGAATTGTGAGATATTGGC 58.101 37.500 0.00 0.00 38.85 4.52
3035 3212 6.095860 TGGAGCAAAGAATTGTGAGATATTGG 59.904 38.462 0.00 0.00 38.85 3.16
3036 3213 7.092137 TGGAGCAAAGAATTGTGAGATATTG 57.908 36.000 0.00 0.00 38.85 1.90
3037 3214 7.707624 TTGGAGCAAAGAATTGTGAGATATT 57.292 32.000 0.00 0.00 38.85 1.28
3038 3215 7.893124 ATTGGAGCAAAGAATTGTGAGATAT 57.107 32.000 0.00 0.00 38.85 1.63
3039 3216 7.394077 TCAATTGGAGCAAAGAATTGTGAGATA 59.606 33.333 5.42 0.00 37.98 1.98
3040 3217 6.209986 TCAATTGGAGCAAAGAATTGTGAGAT 59.790 34.615 5.42 0.00 37.98 2.75
3041 3218 5.535783 TCAATTGGAGCAAAGAATTGTGAGA 59.464 36.000 5.42 0.00 37.98 3.27
3042 3219 5.775686 TCAATTGGAGCAAAGAATTGTGAG 58.224 37.500 5.42 0.00 37.98 3.51
3043 3220 5.775686 CTCAATTGGAGCAAAGAATTGTGA 58.224 37.500 5.42 0.00 37.98 3.58
3073 3250 7.547722 TGTGCGCTCACTAATATTCTAGAAAAA 59.452 33.333 9.71 1.10 43.49 1.94
3074 3251 7.010183 GTGTGCGCTCACTAATATTCTAGAAAA 59.990 37.037 29.80 0.00 43.49 2.29
3075 3252 6.475727 GTGTGCGCTCACTAATATTCTAGAAA 59.524 38.462 29.80 0.00 43.49 2.52
3076 3253 5.977725 GTGTGCGCTCACTAATATTCTAGAA 59.022 40.000 29.80 7.82 43.49 2.10
3077 3254 5.067283 TGTGTGCGCTCACTAATATTCTAGA 59.933 40.000 34.30 13.75 43.49 2.43
3078 3255 5.281727 TGTGTGCGCTCACTAATATTCTAG 58.718 41.667 34.30 0.00 43.49 2.43
3079 3256 5.257082 TGTGTGCGCTCACTAATATTCTA 57.743 39.130 34.30 14.84 43.49 2.10
3080 3257 4.123497 TGTGTGCGCTCACTAATATTCT 57.877 40.909 34.30 0.00 43.49 2.40
3081 3258 4.766007 CATGTGTGCGCTCACTAATATTC 58.234 43.478 34.30 13.33 43.49 1.75
3082 3259 3.002656 GCATGTGTGCGCTCACTAATATT 59.997 43.478 34.30 15.19 42.28 1.28
3083 3260 2.545526 GCATGTGTGCGCTCACTAATAT 59.454 45.455 34.30 21.20 42.28 1.28
3084 3261 1.933181 GCATGTGTGCGCTCACTAATA 59.067 47.619 34.30 20.06 42.28 0.98
3085 3262 0.729116 GCATGTGTGCGCTCACTAAT 59.271 50.000 34.30 22.12 42.28 1.73
3086 3263 2.161831 GCATGTGTGCGCTCACTAA 58.838 52.632 34.30 21.02 42.28 2.24
3087 3264 3.874873 GCATGTGTGCGCTCACTA 58.125 55.556 34.30 23.92 42.28 2.74
3139 3316 9.118300 TCAATTGGCTGTTCAATATTTTTGTTT 57.882 25.926 5.42 0.00 36.45 2.83
3140 3317 8.558700 GTCAATTGGCTGTTCAATATTTTTGTT 58.441 29.630 1.88 0.00 36.45 2.83
3141 3318 7.714377 TGTCAATTGGCTGTTCAATATTTTTGT 59.286 29.630 12.01 0.00 36.45 2.83
3142 3319 8.085720 TGTCAATTGGCTGTTCAATATTTTTG 57.914 30.769 12.01 0.00 36.45 2.44
3143 3320 8.851541 ATGTCAATTGGCTGTTCAATATTTTT 57.148 26.923 12.01 0.00 36.45 1.94
3144 3321 8.723311 CAATGTCAATTGGCTGTTCAATATTTT 58.277 29.630 12.01 0.00 39.69 1.82
3145 3322 7.148373 GCAATGTCAATTGGCTGTTCAATATTT 60.148 33.333 12.01 0.00 42.98 1.40
3146 3323 6.314400 GCAATGTCAATTGGCTGTTCAATATT 59.686 34.615 12.01 0.00 42.98 1.28
3147 3324 5.813672 GCAATGTCAATTGGCTGTTCAATAT 59.186 36.000 12.01 0.00 42.98 1.28
3148 3325 5.170021 GCAATGTCAATTGGCTGTTCAATA 58.830 37.500 12.01 0.00 42.98 1.90
3149 3326 3.998341 GCAATGTCAATTGGCTGTTCAAT 59.002 39.130 12.01 0.00 42.98 2.57
3150 3327 3.181468 TGCAATGTCAATTGGCTGTTCAA 60.181 39.130 12.01 0.00 42.98 2.69
3151 3328 2.364647 TGCAATGTCAATTGGCTGTTCA 59.635 40.909 12.01 1.89 42.98 3.18
3152 3329 3.029320 TGCAATGTCAATTGGCTGTTC 57.971 42.857 12.01 0.00 42.98 3.18
3153 3330 3.472283 TTGCAATGTCAATTGGCTGTT 57.528 38.095 12.01 3.61 42.98 3.16


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.