Multiple sequence alignment - TraesCS2B01G309400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G309400 chr2B 100.000 7016 0 0 1 7016 442332891 442339906 0.000000e+00 12957.0
1 TraesCS2B01G309400 chr2B 98.837 86 1 0 6931 7016 41382927 41383012 3.390000e-33 154.0
2 TraesCS2B01G309400 chr2D 95.733 2812 89 8 691 3499 372808785 372811568 0.000000e+00 4499.0
3 TraesCS2B01G309400 chr2D 97.092 1685 37 3 3536 5211 372811960 372813641 0.000000e+00 2830.0
4 TraesCS2B01G309400 chr2D 91.710 1532 87 21 5250 6753 372813640 372815159 0.000000e+00 2089.0
5 TraesCS2B01G309400 chr2D 91.533 685 42 8 1 682 372807924 372808595 0.000000e+00 929.0
6 TraesCS2B01G309400 chr2A 95.588 2720 90 9 3536 6242 504548027 504545325 0.000000e+00 4331.0
7 TraesCS2B01G309400 chr2A 96.440 1910 48 8 1599 3505 504549977 504548085 0.000000e+00 3133.0
8 TraesCS2B01G309400 chr2A 91.239 1404 99 14 202 1597 504551471 504550084 0.000000e+00 1890.0
9 TraesCS2B01G309400 chr2A 90.291 515 40 7 6230 6737 504545310 504544799 0.000000e+00 665.0
10 TraesCS2B01G309400 chr1D 89.080 348 36 1 4180 4525 334462342 334462689 1.400000e-116 431.0
11 TraesCS2B01G309400 chr1D 87.966 349 40 1 4180 4526 334472557 334472905 1.820000e-110 411.0
12 TraesCS2B01G309400 chr1D 76.582 632 125 19 2687 3305 334471158 334471779 6.790000e-85 326.0
13 TraesCS2B01G309400 chr1D 89.130 230 23 2 4733 4961 334462803 334463031 1.150000e-72 285.0
14 TraesCS2B01G309400 chr1D 84.977 213 25 6 2687 2898 334460863 334461069 7.130000e-50 209.0
15 TraesCS2B01G309400 chr1D 77.690 381 57 13 4738 5117 334473013 334473366 2.560000e-49 207.0
16 TraesCS2B01G309400 chr1D 98.837 86 1 0 6931 7016 468868120 468868205 3.390000e-33 154.0
17 TraesCS2B01G309400 chr1B 88.218 348 38 2 4180 4525 450024673 450025019 5.060000e-111 412.0
18 TraesCS2B01G309400 chr1B 87.356 348 42 1 4180 4525 450029836 450030183 1.420000e-106 398.0
19 TraesCS2B01G309400 chr1B 78.650 637 98 23 2687 3303 450023189 450023807 8.530000e-104 388.0
20 TraesCS2B01G309400 chr1B 89.091 220 23 1 4733 4951 450025133 450025352 8.970000e-69 272.0
21 TraesCS2B01G309400 chr1B 83.562 219 25 3 4733 4951 450030295 450030502 2.000000e-45 195.0
22 TraesCS2B01G309400 chr1B 91.729 133 11 0 6755 6887 515461697 515461565 1.200000e-42 185.0
23 TraesCS2B01G309400 chr1A 87.679 349 39 3 4180 4525 432539877 432540224 3.050000e-108 403.0
24 TraesCS2B01G309400 chr1A 85.526 228 23 3 4733 4960 432540336 432540553 5.470000e-56 230.0
25 TraesCS2B01G309400 chr1A 87.283 173 17 3 2687 2858 432533257 432533425 7.180000e-45 193.0
26 TraesCS2B01G309400 chr5B 80.397 403 66 7 6334 6726 287811477 287811876 1.910000e-75 294.0
27 TraesCS2B01G309400 chr5B 98.837 86 1 0 6931 7016 49691544 49691629 3.390000e-33 154.0
28 TraesCS2B01G309400 chr5D 80.307 391 63 11 6353 6731 254632580 254632192 4.140000e-72 283.0
29 TraesCS2B01G309400 chr5D 97.674 86 2 0 6931 7016 27056484 27056569 1.580000e-31 148.0
30 TraesCS2B01G309400 chr5D 97.561 41 1 0 4026 4066 431153798 431153758 3.510000e-08 71.3
31 TraesCS2B01G309400 chr5A 79.703 404 69 7 6334 6726 338178530 338178129 5.360000e-71 279.0
32 TraesCS2B01G309400 chr5A 91.667 84 7 0 6377 6460 689431107 689431024 4.450000e-22 117.0
33 TraesCS2B01G309400 chr5A 95.122 41 2 0 4026 4066 546517839 546517799 1.630000e-06 65.8
34 TraesCS2B01G309400 chr3B 83.729 295 38 8 6340 6626 242203915 242204207 3.230000e-68 270.0
35 TraesCS2B01G309400 chr3B 98.837 86 1 0 6931 7016 391938793 391938878 3.390000e-33 154.0
36 TraesCS2B01G309400 chr3B 97.727 88 2 0 6929 7016 532726906 532726993 1.220000e-32 152.0
37 TraesCS2B01G309400 chr3B 85.714 105 13 2 4743 4847 419767281 419767383 7.440000e-20 110.0
38 TraesCS2B01G309400 chr3B 97.619 42 1 0 4026 4067 279668468 279668509 9.760000e-09 73.1
39 TraesCS2B01G309400 chr3D 85.200 250 28 6 6377 6617 166513388 166513637 1.510000e-61 248.0
40 TraesCS2B01G309400 chr3D 77.224 281 35 17 4749 5027 301440154 301439901 3.410000e-28 137.0
41 TraesCS2B01G309400 chr3D 97.619 42 1 0 4026 4067 196949487 196949528 9.760000e-09 73.1
42 TraesCS2B01G309400 chr4D 91.045 134 11 1 6755 6887 442170251 442170118 5.590000e-41 180.0
43 TraesCS2B01G309400 chr4D 90.625 96 7 2 6756 6849 442170381 442170286 7.390000e-25 126.0
44 TraesCS2B01G309400 chr7D 76.613 372 49 10 6357 6715 590814087 590813741 3.370000e-38 171.0
45 TraesCS2B01G309400 chr7D 97.701 87 2 0 6930 7016 272823693 272823607 4.380000e-32 150.0
46 TraesCS2B01G309400 chr4B 98.837 86 1 0 6930 7015 441171944 441171859 3.390000e-33 154.0
47 TraesCS2B01G309400 chr4A 97.674 86 2 0 6931 7016 698349453 698349538 1.580000e-31 148.0
48 TraesCS2B01G309400 chr4A 85.714 98 13 1 6758 6854 425239855 425239758 1.250000e-17 102.0
49 TraesCS2B01G309400 chr6B 87.705 122 8 4 6766 6887 135849876 135849990 1.230000e-27 135.0
50 TraesCS2B01G309400 chr6A 90.099 101 9 1 6755 6854 151621951 151621851 5.710000e-26 130.0
51 TraesCS2B01G309400 chr3A 97.619 42 1 0 4026 4067 251339686 251339727 9.760000e-09 73.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G309400 chr2B 442332891 442339906 7015 False 12957.000000 12957 100.000000 1 7016 1 chr2B.!!$F2 7015
1 TraesCS2B01G309400 chr2D 372807924 372815159 7235 False 2586.750000 4499 94.017000 1 6753 4 chr2D.!!$F1 6752
2 TraesCS2B01G309400 chr2A 504544799 504551471 6672 True 2504.750000 4331 93.389500 202 6737 4 chr2A.!!$R1 6535
3 TraesCS2B01G309400 chr1D 334471158 334473366 2208 False 314.666667 411 80.746000 2687 5117 3 chr1D.!!$F3 2430
4 TraesCS2B01G309400 chr1D 334460863 334463031 2168 False 308.333333 431 87.729000 2687 4961 3 chr1D.!!$F2 2274
5 TraesCS2B01G309400 chr1B 450023189 450025352 2163 False 357.333333 412 85.319667 2687 4951 3 chr1B.!!$F1 2264
6 TraesCS2B01G309400 chr1B 450029836 450030502 666 False 296.500000 398 85.459000 4180 4951 2 chr1B.!!$F2 771
7 TraesCS2B01G309400 chr1A 432539877 432540553 676 False 316.500000 403 86.602500 4180 4960 2 chr1A.!!$F2 780

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
688 698 0.034574 ATGTGTGTGTGTGGGTGTGT 60.035 50.000 0.00 0.00 0.00 3.72 F
1152 1348 1.028330 CATCACCCACAAGCAGCGAT 61.028 55.000 0.00 0.00 0.00 4.58 F
1156 1352 1.672030 CCCACAAGCAGCGATGACA 60.672 57.895 4.02 0.00 0.00 3.58 F
1441 1637 1.790387 GTGACAGCTGGATTCGTGC 59.210 57.895 19.93 0.00 0.00 5.34 F
1816 2118 2.746472 GCTTAGGATTGGCCGATCAGTT 60.746 50.000 30.29 18.71 43.43 3.16 F
3314 3699 0.837272 ACACAGTGTGGCACTACCTT 59.163 50.000 26.40 0.00 43.43 3.50 F
4014 4839 1.270550 AGTTTCGAAGGCCATTGCAAG 59.729 47.619 5.01 0.00 40.13 4.01 F
5688 6836 0.396435 TCGCTGTGGATGTTGGAACT 59.604 50.000 0.00 0.00 0.00 3.01 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2039 2361 0.114364 TACACTCTCTCACTGCCCCA 59.886 55.000 0.00 0.0 0.00 4.96 R
2040 2362 0.820871 CTACACTCTCTCACTGCCCC 59.179 60.000 0.00 0.0 0.00 5.80 R
2041 2363 1.551452 ACTACACTCTCTCACTGCCC 58.449 55.000 0.00 0.0 0.00 5.36 R
2358 2680 3.763360 TGCACAATAATGTCCCCTTGAAG 59.237 43.478 0.00 0.0 37.82 3.02 R
3770 4595 1.324740 GCAATCAGGATGGGCAGCAA 61.325 55.000 0.00 0.0 36.16 3.91 R
5217 6363 1.973138 GTGCAGTGCTAAGCAACATG 58.027 50.000 17.60 0.0 43.20 3.21 R
5971 7122 1.067516 AGCAGCAGCAACATCGTTTTT 59.932 42.857 3.17 0.0 45.49 1.94 R
6773 7962 0.038166 TCTCAATGGCAGGACAACCC 59.962 55.000 0.00 0.0 36.73 4.11 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
30 31 3.370366 TCAAGCACATTTGTTGTTGTTGC 59.630 39.130 0.00 0.00 36.00 4.17
32 33 2.931325 AGCACATTTGTTGTTGTTGCTG 59.069 40.909 0.00 0.00 36.00 4.41
33 34 2.672381 GCACATTTGTTGTTGTTGCTGT 59.328 40.909 0.00 0.00 36.00 4.40
34 35 3.124976 GCACATTTGTTGTTGTTGCTGTT 59.875 39.130 0.00 0.00 36.00 3.16
35 36 4.639959 CACATTTGTTGTTGTTGCTGTTG 58.360 39.130 0.00 0.00 36.00 3.33
36 37 4.388165 CACATTTGTTGTTGTTGCTGTTGA 59.612 37.500 0.00 0.00 36.00 3.18
37 38 5.063691 CACATTTGTTGTTGTTGCTGTTGAT 59.936 36.000 0.00 0.00 36.00 2.57
38 39 5.642919 ACATTTGTTGTTGTTGCTGTTGATT 59.357 32.000 0.00 0.00 33.74 2.57
42 43 1.411977 TGTTGTTGCTGTTGATTGGGG 59.588 47.619 0.00 0.00 0.00 4.96
83 84 3.605461 CGAGACGTTCACGACTAACTTGA 60.605 47.826 6.30 0.00 43.58 3.02
90 91 4.866508 TCACGACTAACTTGACATCCTT 57.133 40.909 0.00 0.00 0.00 3.36
91 92 5.209818 TCACGACTAACTTGACATCCTTT 57.790 39.130 0.00 0.00 0.00 3.11
105 106 6.546484 TGACATCCTTTCCAGATTTCTCTTT 58.454 36.000 0.00 0.00 0.00 2.52
119 120 8.591312 CAGATTTCTCTTTCTCGATGTTAGTTC 58.409 37.037 0.00 0.00 0.00 3.01
139 140 9.713740 TTAGTTCGAGTCGTATTAGATTTCTTC 57.286 33.333 13.12 0.00 0.00 2.87
150 151 5.874895 TTAGATTTCTTCGTCTCGACTCA 57.125 39.130 0.00 0.00 34.89 3.41
169 170 4.023291 CTCAAGAGCTCCCTAGACTCTTT 58.977 47.826 10.93 0.00 40.82 2.52
170 171 4.421131 TCAAGAGCTCCCTAGACTCTTTT 58.579 43.478 10.93 0.00 40.82 2.27
178 179 5.019657 TCCCTAGACTCTTTTTAGGACCA 57.980 43.478 0.00 0.00 36.83 4.02
198 199 3.750130 CCACTTGGACATTCAAGAGTGAG 59.250 47.826 6.92 0.00 44.98 3.51
210 211 8.045507 ACATTCAAGAGTGAGTGAATATGTGAT 58.954 33.333 6.27 0.00 42.56 3.06
222 223 4.845796 TGAATATGTGATATGCTCCTGGGA 59.154 41.667 0.00 0.00 0.00 4.37
324 326 3.963428 AGCTAGGTCAACGAGTTCATT 57.037 42.857 0.00 0.00 0.00 2.57
372 377 9.483916 CATGATATATGGTGCACATTCATTTTT 57.516 29.630 20.43 3.75 41.03 1.94
448 453 5.573337 ATTTGCTTCTTGCCTTCTATGTC 57.427 39.130 0.00 0.00 42.00 3.06
450 455 2.233676 TGCTTCTTGCCTTCTATGTCGA 59.766 45.455 0.00 0.00 42.00 4.20
451 456 2.605366 GCTTCTTGCCTTCTATGTCGAC 59.395 50.000 9.11 9.11 35.15 4.20
452 457 3.677424 GCTTCTTGCCTTCTATGTCGACT 60.677 47.826 17.92 4.95 35.15 4.18
453 458 4.499183 CTTCTTGCCTTCTATGTCGACTT 58.501 43.478 17.92 13.30 0.00 3.01
546 554 3.195661 AGTCGTTGACAGAGTTGGTTTC 58.804 45.455 0.00 0.00 34.60 2.78
547 555 2.287103 GTCGTTGACAGAGTTGGTTTCC 59.713 50.000 0.00 0.00 32.09 3.13
565 573 4.903045 TTCCTGTTGAGTACCTTAAGGG 57.097 45.455 25.31 7.85 40.27 3.95
600 608 8.908903 TGTGTTGGAAGACAATTTGTACTTATT 58.091 29.630 1.15 0.00 41.95 1.40
682 692 5.437289 AATAGACAAATGTGTGTGTGTGG 57.563 39.130 0.00 0.00 38.41 4.17
688 698 0.034574 ATGTGTGTGTGTGGGTGTGT 60.035 50.000 0.00 0.00 0.00 3.72
807 1001 1.689352 CGTCGTTACCATTGCCGTCC 61.689 60.000 0.00 0.00 0.00 4.79
809 1003 1.078708 CGTTACCATTGCCGTCCCT 60.079 57.895 0.00 0.00 0.00 4.20
822 1016 1.562783 CGTCCCTTCTCCTTTCTCCT 58.437 55.000 0.00 0.00 0.00 3.69
828 1022 2.499693 CCTTCTCCTTTCTCCTCACCTC 59.500 54.545 0.00 0.00 0.00 3.85
839 1034 1.324005 CCTCACCTCCTCCGTTCCTC 61.324 65.000 0.00 0.00 0.00 3.71
912 1108 4.767255 CTGCTGCCCCGACCTCAC 62.767 72.222 0.00 0.00 0.00 3.51
1152 1348 1.028330 CATCACCCACAAGCAGCGAT 61.028 55.000 0.00 0.00 0.00 4.58
1156 1352 1.672030 CCCACAAGCAGCGATGACA 60.672 57.895 4.02 0.00 0.00 3.58
1170 1366 2.478031 CGATGACAAAGAGGACGACGAT 60.478 50.000 0.00 0.00 0.00 3.73
1278 1474 2.639286 CTTTGGCTGTGCGGTCAC 59.361 61.111 0.00 0.00 43.40 3.67
1317 1513 2.426522 TCTAGTGTTGAATGTGCAGCC 58.573 47.619 0.00 0.00 0.00 4.85
1359 1555 4.275196 GGTTTGGTCCTATTTTATCCGAGC 59.725 45.833 0.00 0.00 0.00 5.03
1441 1637 1.790387 GTGACAGCTGGATTCGTGC 59.210 57.895 19.93 0.00 0.00 5.34
1526 1722 3.811497 ACCGGTTGTTTACTTAGCAAGTC 59.189 43.478 0.00 0.00 41.77 3.01
1559 1756 9.677567 GAGTGCTTCACTTGATTATGTTTAAAA 57.322 29.630 0.66 0.00 45.44 1.52
1647 1949 5.278957 GCCTTACAGTTCACATGGAAAATGT 60.279 40.000 16.18 16.18 39.61 2.71
1738 2040 6.128526 GCTTCATTCTCACGTTAAGCTTAAGT 60.129 38.462 19.16 15.28 37.08 2.24
1816 2118 2.746472 GCTTAGGATTGGCCGATCAGTT 60.746 50.000 30.29 18.71 43.43 3.16
1900 2203 5.247110 TGCTGTTCTCTTCTATATCCATCCC 59.753 44.000 0.00 0.00 0.00 3.85
2033 2355 6.909357 GCATGAAATAGTTTAGATGCAGTGAC 59.091 38.462 0.00 0.00 37.98 3.67
2034 2356 7.201679 GCATGAAATAGTTTAGATGCAGTGACT 60.202 37.037 0.00 0.00 37.98 3.41
2035 2357 8.671921 CATGAAATAGTTTAGATGCAGTGACTT 58.328 33.333 0.00 0.00 0.00 3.01
2036 2358 8.621532 TGAAATAGTTTAGATGCAGTGACTTT 57.378 30.769 0.00 0.00 0.00 2.66
2037 2359 9.066892 TGAAATAGTTTAGATGCAGTGACTTTT 57.933 29.630 0.00 0.00 0.00 2.27
2038 2360 9.899226 GAAATAGTTTAGATGCAGTGACTTTTT 57.101 29.630 0.00 0.22 0.00 1.94
2292 2614 5.097742 TGACGAAGATTCCATTGGTATGT 57.902 39.130 1.86 0.00 0.00 2.29
2358 2680 7.598493 TCAAGGTTCTGCAAAATAATTTAGCAC 59.402 33.333 0.00 0.00 32.77 4.40
2359 2681 7.232118 AGGTTCTGCAAAATAATTTAGCACT 57.768 32.000 0.00 0.00 32.77 4.40
2375 2697 4.322057 AGCACTTCAAGGGGACATTATT 57.678 40.909 0.00 0.00 0.00 1.40
2376 2698 4.019174 AGCACTTCAAGGGGACATTATTG 58.981 43.478 0.00 0.00 0.00 1.90
2377 2699 3.763897 GCACTTCAAGGGGACATTATTGT 59.236 43.478 0.00 0.00 39.32 2.71
2378 2700 4.380867 GCACTTCAAGGGGACATTATTGTG 60.381 45.833 0.00 0.00 35.79 3.33
2379 2701 3.763897 ACTTCAAGGGGACATTATTGTGC 59.236 43.478 1.02 1.02 42.96 4.57
2380 2702 3.448093 TCAAGGGGACATTATTGTGCA 57.552 42.857 10.79 0.00 45.27 4.57
2381 2703 3.772387 TCAAGGGGACATTATTGTGCAA 58.228 40.909 10.79 0.00 45.27 4.08
2455 2777 5.361571 TGGATCATAAAAGATGCACATTGCT 59.638 36.000 0.00 0.00 45.31 3.91
2491 2813 6.198237 AGCAGAATCTGGCTATCCTTATTT 57.802 37.500 12.66 0.00 38.90 1.40
2641 2963 5.560966 TTCGAAGTTTTCTTTGCTTCAGT 57.439 34.783 0.00 0.00 40.61 3.41
2684 3006 6.039605 TGAATCATTGACATTCACAAGTGTGT 59.960 34.615 11.06 1.85 45.76 3.72
2932 3265 9.331282 CTTTACTGAATTTACCTTCTCATAGGG 57.669 37.037 0.00 0.00 39.76 3.53
2965 3320 9.944376 TTCTAATATTAGCATTGTATCTCCACC 57.056 33.333 16.37 0.00 0.00 4.61
3314 3699 0.837272 ACACAGTGTGGCACTACCTT 59.163 50.000 26.40 0.00 43.43 3.50
3330 3715 6.017109 GCACTACCTTTGGTCCACAATATATG 60.017 42.308 0.00 0.00 39.21 1.78
3331 3716 7.054124 CACTACCTTTGGTCCACAATATATGT 58.946 38.462 0.00 0.00 39.04 2.29
3357 3742 5.872070 ACTGAATCCGTCAATTTCTCTCTTC 59.128 40.000 0.00 0.00 35.22 2.87
3499 3943 4.897025 TTTGCAGAAAAATGGCCAAAAG 57.103 36.364 10.96 0.00 0.00 2.27
3505 3949 5.934043 GCAGAAAAATGGCCAAAAGAAGTAT 59.066 36.000 10.96 0.00 0.00 2.12
3506 3950 7.096551 GCAGAAAAATGGCCAAAAGAAGTATA 58.903 34.615 10.96 0.00 0.00 1.47
3675 4476 3.887716 AGCCGTGTCGTAGTATCCTATTT 59.112 43.478 0.00 0.00 0.00 1.40
3770 4595 4.696402 CGAGTTGTACTAGGAGAGTCAGTT 59.304 45.833 0.00 0.00 39.81 3.16
3836 4661 3.753272 CAGTCCCTGTAATCTGTTTGGTG 59.247 47.826 0.00 0.00 0.00 4.17
3930 4755 6.306356 CAGAAACTTGAATGGCGATTTTACAG 59.694 38.462 0.00 0.00 0.00 2.74
3968 4793 1.467374 GCAATCGAAACATGTTCCCGG 60.467 52.381 23.90 14.27 0.00 5.73
3986 4811 3.243002 CCCGGTATCGTCTTGTAACTCTC 60.243 52.174 0.00 0.00 33.95 3.20
4014 4839 1.270550 AGTTTCGAAGGCCATTGCAAG 59.729 47.619 5.01 0.00 40.13 4.01
4066 4891 4.024977 CCACACTATTTTTGCCAAACTTGC 60.025 41.667 0.00 0.00 0.00 4.01
4067 4892 4.024977 CACACTATTTTTGCCAAACTTGCC 60.025 41.667 0.00 0.00 0.00 4.52
4093 5043 8.912988 CCCAAAGCTTTTATATGATGGAAGTAA 58.087 33.333 9.53 0.00 0.00 2.24
4711 5856 6.636454 TTTAGTAGATTTGTCCATCACCCT 57.364 37.500 0.00 0.00 0.00 4.34
4789 5935 7.613801 TGGCAGAAGCATAAAGAAAACCTAATA 59.386 33.333 0.00 0.00 44.61 0.98
4900 6046 1.598701 GGAGTGATGGTGCTTTGGCC 61.599 60.000 0.00 0.00 37.74 5.36
4953 6099 3.875134 ACGATTTTCTTTGACTCGGTTGT 59.125 39.130 0.00 0.00 33.82 3.32
5002 6148 3.439857 TTATTGTCCTGCTGCCTTTCT 57.560 42.857 0.00 0.00 0.00 2.52
5159 6305 6.183360 TGGAAGTCATGTGTATTTTATGCGTC 60.183 38.462 0.00 0.00 0.00 5.19
5237 6383 0.883833 ATGTTGCTTAGCACTGCACC 59.116 50.000 6.34 0.00 38.71 5.01
5330 6476 6.024893 TGGATATATGATCCAGTGGTGATGA 58.975 40.000 9.54 0.00 42.81 2.92
5488 6636 2.495409 TGCTGTTTCATGTGTGCTTG 57.505 45.000 0.00 0.00 0.00 4.01
5489 6637 2.022934 TGCTGTTTCATGTGTGCTTGA 58.977 42.857 0.00 0.00 0.00 3.02
5496 6644 3.719268 TCATGTGTGCTTGAATACCCT 57.281 42.857 0.00 0.00 0.00 4.34
5526 6674 2.093341 GGTAATCAAGAGGGTACGGCAA 60.093 50.000 0.00 0.00 0.00 4.52
5634 6782 1.980772 GCAGCTGGGAGCCATTTGT 60.981 57.895 17.12 0.00 43.77 2.83
5688 6836 0.396435 TCGCTGTGGATGTTGGAACT 59.604 50.000 0.00 0.00 0.00 3.01
5754 6902 1.078214 CCGCTGGATTGAAGCCTCA 60.078 57.895 0.00 0.00 37.37 3.86
5790 6938 1.844687 GGCAGCAGGAGGAAGATTTT 58.155 50.000 0.00 0.00 0.00 1.82
5802 6950 2.488153 GGAAGATTTTCCCGTGAAGGTG 59.512 50.000 3.55 0.00 46.03 4.00
5820 6968 6.263168 TGAAGGTGAAGAAGAATGAAAAGGAC 59.737 38.462 0.00 0.00 0.00 3.85
5849 6997 2.209064 GATGTTGCTGCTGCCACTGG 62.209 60.000 18.44 0.00 36.03 4.00
5851 6999 2.595463 TTGCTGCTGCCACTGGTC 60.595 61.111 13.47 0.00 38.71 4.02
5861 7009 1.296392 CCACTGGTCCAGCGAATGA 59.704 57.895 19.40 0.00 34.37 2.57
5867 7015 1.073125 TGGTCCAGCGAATGAAAAGGA 59.927 47.619 0.00 0.00 0.00 3.36
5891 7039 5.779529 AAAGAAGATGATGTTGTTGCTGT 57.220 34.783 0.00 0.00 0.00 4.40
5894 7042 4.581824 AGAAGATGATGTTGTTGCTGTTGT 59.418 37.500 0.00 0.00 0.00 3.32
5943 7094 2.789917 GATGTTGCTCCTGCTGCG 59.210 61.111 0.00 0.00 40.48 5.18
5962 7113 1.590238 CGACTGATCCAGCGAATGAAC 59.410 52.381 0.00 0.00 34.71 3.18
5971 7122 4.584874 TCCAGCGAATGAACAGGATAAAA 58.415 39.130 0.00 0.00 0.00 1.52
6005 7156 2.747989 CTGCTGCTGTCACTGATTCAAT 59.252 45.455 0.00 0.00 0.00 2.57
6137 7288 2.705658 TGGATATGGTTTCGCTGATCCT 59.294 45.455 0.00 0.00 35.02 3.24
6140 7291 4.214332 GGATATGGTTTCGCTGATCCTTTC 59.786 45.833 0.00 0.00 31.88 2.62
6163 7315 6.432107 TCTGTTAATTTTGGTACTTGCGAAC 58.568 36.000 0.00 0.00 0.00 3.95
6197 7349 0.405198 TGAAAGCTCAATGGGCCTCA 59.595 50.000 0.00 1.95 0.00 3.86
6227 7393 4.696479 CATCTCTAATAGGTGCCCTGTT 57.304 45.455 8.01 8.01 38.48 3.16
6229 7395 5.440610 CATCTCTAATAGGTGCCCTGTTTT 58.559 41.667 8.18 1.64 36.41 2.43
6230 7396 6.591935 CATCTCTAATAGGTGCCCTGTTTTA 58.408 40.000 8.18 2.50 36.41 1.52
6232 7398 5.130477 TCTCTAATAGGTGCCCTGTTTTAGG 59.870 44.000 8.18 0.00 46.88 2.69
6311 7491 2.670934 GCCCCAGCCGCATCATAG 60.671 66.667 0.00 0.00 0.00 2.23
6373 7557 9.313118 ACTTGTCTAAAATCAATCCAAAACAAC 57.687 29.630 0.00 0.00 0.00 3.32
6460 7644 6.825284 TCAAATGCAACACAAATACAACAG 57.175 33.333 0.00 0.00 0.00 3.16
6467 7651 7.539436 TGCAACACAAATACAACAGAGTTTAA 58.461 30.769 0.00 0.00 0.00 1.52
6471 7655 8.276252 ACACAAATACAACAGAGTTTAACACT 57.724 30.769 0.00 0.00 39.07 3.55
6532 7719 4.642429 AGATGAAAGTAGGAGCGTTGTTT 58.358 39.130 0.00 0.00 0.00 2.83
6533 7720 4.452455 AGATGAAAGTAGGAGCGTTGTTTG 59.548 41.667 0.00 0.00 0.00 2.93
6553 7742 1.514087 CATGCCAACCACTCCATGC 59.486 57.895 0.00 0.00 0.00 4.06
6646 7835 1.239347 GTCTTGCCTTCTGGTTGGTC 58.761 55.000 0.00 0.00 35.27 4.02
6651 7840 1.071471 CCTTCTGGTTGGTCGCACT 59.929 57.895 0.00 0.00 0.00 4.40
6683 7872 6.409695 CCCATGAGGTGATAGAAGGTGTAATT 60.410 42.308 0.00 0.00 0.00 1.40
6709 7898 2.768253 TTGTCCATGCTCGTTCTCAT 57.232 45.000 0.00 0.00 0.00 2.90
6748 7937 7.155655 TGCAAGCTGTAATGATGTATCAAAA 57.844 32.000 0.00 0.00 40.69 2.44
6753 7942 8.565896 AGCTGTAATGATGTATCAAAAGTTCA 57.434 30.769 0.00 0.00 40.69 3.18
6754 7943 8.671921 AGCTGTAATGATGTATCAAAAGTTCAG 58.328 33.333 0.00 4.36 40.69 3.02
6755 7944 8.668353 GCTGTAATGATGTATCAAAAGTTCAGA 58.332 33.333 0.00 0.00 40.69 3.27
6756 7945 9.979270 CTGTAATGATGTATCAAAAGTTCAGAC 57.021 33.333 0.00 0.00 40.69 3.51
6757 7946 8.655970 TGTAATGATGTATCAAAAGTTCAGACG 58.344 33.333 0.00 0.00 40.69 4.18
6758 7947 7.905604 AATGATGTATCAAAAGTTCAGACGA 57.094 32.000 0.00 0.00 40.69 4.20
6759 7948 6.951256 TGATGTATCAAAAGTTCAGACGAG 57.049 37.500 0.00 0.00 33.08 4.18
6760 7949 5.869344 TGATGTATCAAAAGTTCAGACGAGG 59.131 40.000 0.00 0.00 33.08 4.63
6761 7950 5.462530 TGTATCAAAAGTTCAGACGAGGA 57.537 39.130 0.00 0.00 0.00 3.71
6762 7951 6.037786 TGTATCAAAAGTTCAGACGAGGAT 57.962 37.500 0.00 0.00 0.00 3.24
6763 7952 6.100004 TGTATCAAAAGTTCAGACGAGGATC 58.900 40.000 0.00 0.00 0.00 3.36
6764 7953 3.926616 TCAAAAGTTCAGACGAGGATCC 58.073 45.455 2.48 2.48 0.00 3.36
6765 7954 3.003480 CAAAAGTTCAGACGAGGATCCC 58.997 50.000 8.55 0.00 0.00 3.85
6766 7955 1.196012 AAGTTCAGACGAGGATCCCC 58.804 55.000 8.55 0.00 0.00 4.81
6768 7957 0.461961 GTTCAGACGAGGATCCCCTG 59.538 60.000 8.55 10.99 44.53 4.45
6769 7958 0.335019 TTCAGACGAGGATCCCCTGA 59.665 55.000 8.55 13.11 44.53 3.86
6770 7959 0.395862 TCAGACGAGGATCCCCTGAC 60.396 60.000 8.55 0.00 44.53 3.51
6771 7960 1.454111 AGACGAGGATCCCCTGACG 60.454 63.158 8.55 9.46 44.53 4.35
6772 7961 1.753463 GACGAGGATCCCCTGACGT 60.753 63.158 8.55 12.58 44.53 4.34
6773 7962 2.005960 GACGAGGATCCCCTGACGTG 62.006 65.000 18.08 0.97 44.53 4.49
6774 7963 2.786495 CGAGGATCCCCTGACGTGG 61.786 68.421 8.55 0.00 44.53 4.94
6775 7964 2.365635 AGGATCCCCTGACGTGGG 60.366 66.667 8.55 3.91 46.68 4.61
6776 7965 2.687566 GGATCCCCTGACGTGGGT 60.688 66.667 9.94 0.00 45.70 4.51
6777 7966 2.298661 GGATCCCCTGACGTGGGTT 61.299 63.158 9.94 1.66 45.70 4.11
6778 7967 1.078426 GATCCCCTGACGTGGGTTG 60.078 63.158 9.94 0.00 45.70 3.77
6779 7968 1.838073 GATCCCCTGACGTGGGTTGT 61.838 60.000 9.94 0.00 45.70 3.32
6780 7969 1.838073 ATCCCCTGACGTGGGTTGTC 61.838 60.000 9.94 0.00 45.70 3.18
6781 7970 2.032071 CCCTGACGTGGGTTGTCC 59.968 66.667 2.71 0.00 42.25 4.02
6782 7971 2.516888 CCCTGACGTGGGTTGTCCT 61.517 63.158 2.71 0.00 42.25 3.85
6783 7972 1.301716 CCTGACGTGGGTTGTCCTG 60.302 63.158 0.00 0.00 35.46 3.86
6784 7973 1.961277 CTGACGTGGGTTGTCCTGC 60.961 63.158 0.00 0.00 35.46 4.85
6785 7974 2.668550 GACGTGGGTTGTCCTGCC 60.669 66.667 0.00 0.00 36.20 4.85
6786 7975 3.469863 GACGTGGGTTGTCCTGCCA 62.470 63.158 0.00 0.00 36.20 4.92
6787 7976 2.034066 CGTGGGTTGTCCTGCCAT 59.966 61.111 0.00 0.00 36.20 4.40
6788 7977 1.603455 CGTGGGTTGTCCTGCCATT 60.603 57.895 0.00 0.00 36.20 3.16
6789 7978 1.865788 CGTGGGTTGTCCTGCCATTG 61.866 60.000 0.00 0.00 36.20 2.82
6790 7979 0.539438 GTGGGTTGTCCTGCCATTGA 60.539 55.000 0.00 0.00 36.20 2.57
6791 7980 0.251297 TGGGTTGTCCTGCCATTGAG 60.251 55.000 0.00 0.00 36.20 3.02
6792 7981 0.038166 GGGTTGTCCTGCCATTGAGA 59.962 55.000 0.00 0.00 0.00 3.27
6793 7982 1.457346 GGTTGTCCTGCCATTGAGAG 58.543 55.000 0.00 0.00 0.00 3.20
6794 7983 1.003580 GGTTGTCCTGCCATTGAGAGA 59.996 52.381 0.00 0.00 0.00 3.10
6795 7984 2.079925 GTTGTCCTGCCATTGAGAGAC 58.920 52.381 0.00 0.00 0.00 3.36
6796 7985 1.649321 TGTCCTGCCATTGAGAGACT 58.351 50.000 0.00 0.00 0.00 3.24
6797 7986 1.277273 TGTCCTGCCATTGAGAGACTG 59.723 52.381 0.00 0.00 0.00 3.51
6798 7987 1.552337 GTCCTGCCATTGAGAGACTGA 59.448 52.381 0.00 0.00 0.00 3.41
6799 7988 1.552337 TCCTGCCATTGAGAGACTGAC 59.448 52.381 0.00 0.00 0.00 3.51
6800 7989 1.277273 CCTGCCATTGAGAGACTGACA 59.723 52.381 0.00 0.00 0.00 3.58
6801 7990 2.344950 CTGCCATTGAGAGACTGACAC 58.655 52.381 0.00 0.00 0.00 3.67
6802 7991 1.693606 TGCCATTGAGAGACTGACACA 59.306 47.619 0.00 0.00 0.00 3.72
6803 7992 2.303890 TGCCATTGAGAGACTGACACAT 59.696 45.455 0.00 0.00 0.00 3.21
6804 7993 2.676839 GCCATTGAGAGACTGACACATG 59.323 50.000 0.00 0.00 0.00 3.21
6805 7994 3.268330 CCATTGAGAGACTGACACATGG 58.732 50.000 0.00 0.00 0.00 3.66
6806 7995 3.055602 CCATTGAGAGACTGACACATGGA 60.056 47.826 0.00 0.00 0.00 3.41
6807 7996 4.383880 CCATTGAGAGACTGACACATGGAT 60.384 45.833 0.00 0.00 0.00 3.41
6808 7997 4.462508 TTGAGAGACTGACACATGGATC 57.537 45.455 0.00 0.00 0.00 3.36
6809 7998 2.762887 TGAGAGACTGACACATGGATCC 59.237 50.000 4.20 4.20 0.00 3.36
6810 7999 2.102252 GAGAGACTGACACATGGATCCC 59.898 54.545 9.90 0.00 0.00 3.85
6811 8000 1.833630 GAGACTGACACATGGATCCCA 59.166 52.381 9.90 0.00 38.19 4.37
6812 8001 1.556911 AGACTGACACATGGATCCCAC 59.443 52.381 9.90 0.00 35.80 4.61
6813 8002 0.620556 ACTGACACATGGATCCCACC 59.379 55.000 9.90 0.00 35.80 4.61
6814 8003 0.620030 CTGACACATGGATCCCACCA 59.380 55.000 9.90 0.00 44.41 4.17
6815 8004 1.004628 CTGACACATGGATCCCACCAA 59.995 52.381 9.90 0.00 43.47 3.67
6816 8005 1.004628 TGACACATGGATCCCACCAAG 59.995 52.381 9.90 0.00 43.47 3.61
6817 8006 0.323725 ACACATGGATCCCACCAAGC 60.324 55.000 9.90 0.00 43.47 4.01
6818 8007 0.323633 CACATGGATCCCACCAAGCA 60.324 55.000 9.90 0.00 43.47 3.91
6819 8008 0.632835 ACATGGATCCCACCAAGCAT 59.367 50.000 9.90 0.00 43.47 3.79
6820 8009 1.037493 CATGGATCCCACCAAGCATG 58.963 55.000 9.90 0.00 43.47 4.06
6830 8019 3.751246 CAAGCATGGGCCCACGTG 61.751 66.667 31.51 24.55 42.56 4.49
6831 8020 4.284550 AAGCATGGGCCCACGTGT 62.285 61.111 31.51 8.67 42.56 4.49
6832 8021 4.722700 AGCATGGGCCCACGTGTC 62.723 66.667 31.51 17.99 42.56 3.67
6834 8023 2.747460 CATGGGCCCACGTGTCAG 60.747 66.667 31.51 7.32 0.00 3.51
6835 8024 4.722700 ATGGGCCCACGTGTCAGC 62.723 66.667 31.51 13.86 0.00 4.26
6841 8030 4.337060 CCACGTGTCAGCGACCGA 62.337 66.667 15.65 0.00 33.16 4.69
6842 8031 2.354188 CACGTGTCAGCGACCGAA 60.354 61.111 7.58 0.00 33.16 4.30
6843 8032 1.947146 CACGTGTCAGCGACCGAAA 60.947 57.895 7.58 0.00 33.16 3.46
6844 8033 1.660575 ACGTGTCAGCGACCGAAAG 60.661 57.895 18.25 4.07 33.16 2.62
6858 8047 2.957576 CGAAAGGCAGTGAAAGTCAG 57.042 50.000 0.00 0.00 0.00 3.51
6859 8048 1.532868 CGAAAGGCAGTGAAAGTCAGG 59.467 52.381 0.00 0.00 0.00 3.86
6860 8049 1.882623 GAAAGGCAGTGAAAGTCAGGG 59.117 52.381 0.00 0.00 0.00 4.45
6861 8050 0.846693 AAGGCAGTGAAAGTCAGGGT 59.153 50.000 0.00 0.00 0.00 4.34
6862 8051 0.846693 AGGCAGTGAAAGTCAGGGTT 59.153 50.000 0.00 0.00 0.00 4.11
6863 8052 0.954452 GGCAGTGAAAGTCAGGGTTG 59.046 55.000 0.00 0.00 0.00 3.77
6864 8053 0.954452 GCAGTGAAAGTCAGGGTTGG 59.046 55.000 0.00 0.00 0.00 3.77
6865 8054 0.954452 CAGTGAAAGTCAGGGTTGGC 59.046 55.000 0.00 0.00 0.00 4.52
6866 8055 0.846693 AGTGAAAGTCAGGGTTGGCT 59.153 50.000 0.00 0.00 42.21 4.75
6867 8056 2.054799 AGTGAAAGTCAGGGTTGGCTA 58.945 47.619 0.00 0.00 38.62 3.93
6868 8057 2.644798 AGTGAAAGTCAGGGTTGGCTAT 59.355 45.455 0.00 0.00 38.62 2.97
6869 8058 2.749621 GTGAAAGTCAGGGTTGGCTATG 59.250 50.000 0.00 0.00 38.62 2.23
6870 8059 2.375174 TGAAAGTCAGGGTTGGCTATGT 59.625 45.455 0.00 0.00 38.62 2.29
6871 8060 2.789409 AAGTCAGGGTTGGCTATGTC 57.211 50.000 0.00 0.00 38.62 3.06
6872 8061 1.656587 AGTCAGGGTTGGCTATGTCA 58.343 50.000 0.00 0.00 37.54 3.58
6873 8062 1.556911 AGTCAGGGTTGGCTATGTCAG 59.443 52.381 0.00 0.00 37.54 3.51
6874 8063 1.555075 GTCAGGGTTGGCTATGTCAGA 59.445 52.381 0.00 0.00 0.00 3.27
6875 8064 1.833630 TCAGGGTTGGCTATGTCAGAG 59.166 52.381 0.00 0.00 0.00 3.35
6876 8065 1.134280 CAGGGTTGGCTATGTCAGAGG 60.134 57.143 0.00 0.00 0.00 3.69
6877 8066 1.204146 GGGTTGGCTATGTCAGAGGA 58.796 55.000 0.00 0.00 0.00 3.71
6878 8067 1.771255 GGGTTGGCTATGTCAGAGGAT 59.229 52.381 0.00 0.00 0.00 3.24
6879 8068 2.224402 GGGTTGGCTATGTCAGAGGATC 60.224 54.545 0.00 0.00 0.00 3.36
6880 8069 2.224402 GGTTGGCTATGTCAGAGGATCC 60.224 54.545 2.48 2.48 33.66 3.36
6881 8070 1.332195 TGGCTATGTCAGAGGATCCG 58.668 55.000 5.98 0.00 33.66 4.18
6882 8071 1.333177 GGCTATGTCAGAGGATCCGT 58.667 55.000 5.98 0.00 33.66 4.69
6883 8072 1.000283 GGCTATGTCAGAGGATCCGTG 60.000 57.143 5.98 8.48 33.66 4.94
6884 8073 1.683917 GCTATGTCAGAGGATCCGTGT 59.316 52.381 5.98 0.00 33.66 4.49
6885 8074 2.287909 GCTATGTCAGAGGATCCGTGTC 60.288 54.545 5.98 6.76 33.66 3.67
6886 8075 1.115467 ATGTCAGAGGATCCGTGTCC 58.885 55.000 5.98 4.71 38.62 4.02
6887 8076 0.970937 TGTCAGAGGATCCGTGTCCC 60.971 60.000 5.98 2.47 39.17 4.46
6888 8077 0.970937 GTCAGAGGATCCGTGTCCCA 60.971 60.000 5.98 0.00 39.17 4.37
6889 8078 0.252057 TCAGAGGATCCGTGTCCCAA 60.252 55.000 5.98 0.00 39.17 4.12
6890 8079 0.613260 CAGAGGATCCGTGTCCCAAA 59.387 55.000 5.98 0.00 39.17 3.28
6891 8080 1.003118 CAGAGGATCCGTGTCCCAAAA 59.997 52.381 5.98 0.00 39.17 2.44
6892 8081 1.279271 AGAGGATCCGTGTCCCAAAAG 59.721 52.381 5.98 0.00 39.17 2.27
6893 8082 1.003233 GAGGATCCGTGTCCCAAAAGT 59.997 52.381 5.98 0.00 39.17 2.66
6894 8083 1.423921 AGGATCCGTGTCCCAAAAGTT 59.576 47.619 5.98 0.00 39.17 2.66
6895 8084 1.810755 GGATCCGTGTCCCAAAAGTTC 59.189 52.381 0.00 0.00 31.82 3.01
6896 8085 1.810755 GATCCGTGTCCCAAAAGTTCC 59.189 52.381 0.00 0.00 0.00 3.62
6897 8086 0.179012 TCCGTGTCCCAAAAGTTCCC 60.179 55.000 0.00 0.00 0.00 3.97
6898 8087 0.179001 CCGTGTCCCAAAAGTTCCCT 60.179 55.000 0.00 0.00 0.00 4.20
6899 8088 1.687563 CGTGTCCCAAAAGTTCCCTT 58.312 50.000 0.00 0.00 0.00 3.95
6900 8089 1.336755 CGTGTCCCAAAAGTTCCCTTG 59.663 52.381 0.00 0.00 0.00 3.61
6901 8090 2.661718 GTGTCCCAAAAGTTCCCTTGA 58.338 47.619 0.00 0.00 0.00 3.02
6902 8091 3.230976 GTGTCCCAAAAGTTCCCTTGAT 58.769 45.455 0.00 0.00 0.00 2.57
6903 8092 3.255888 GTGTCCCAAAAGTTCCCTTGATC 59.744 47.826 0.00 0.00 0.00 2.92
6904 8093 2.826128 GTCCCAAAAGTTCCCTTGATCC 59.174 50.000 0.00 0.00 0.00 3.36
6905 8094 2.179427 CCCAAAAGTTCCCTTGATCCC 58.821 52.381 0.00 0.00 0.00 3.85
6906 8095 2.492567 CCCAAAAGTTCCCTTGATCCCA 60.493 50.000 0.00 0.00 0.00 4.37
6907 8096 3.238597 CCAAAAGTTCCCTTGATCCCAA 58.761 45.455 0.00 0.00 0.00 4.12
6908 8097 3.645687 CCAAAAGTTCCCTTGATCCCAAA 59.354 43.478 0.00 0.00 0.00 3.28
6909 8098 4.102367 CCAAAAGTTCCCTTGATCCCAAAA 59.898 41.667 0.00 0.00 0.00 2.44
6910 8099 4.955811 AAAGTTCCCTTGATCCCAAAAC 57.044 40.909 0.00 0.00 0.00 2.43
6911 8100 2.889512 AGTTCCCTTGATCCCAAAACC 58.110 47.619 0.00 0.00 0.00 3.27
6912 8101 2.450886 AGTTCCCTTGATCCCAAAACCT 59.549 45.455 0.00 0.00 0.00 3.50
6913 8102 3.660669 AGTTCCCTTGATCCCAAAACCTA 59.339 43.478 0.00 0.00 0.00 3.08
6914 8103 4.107311 AGTTCCCTTGATCCCAAAACCTAA 59.893 41.667 0.00 0.00 0.00 2.69
6915 8104 4.042271 TCCCTTGATCCCAAAACCTAAC 57.958 45.455 0.00 0.00 0.00 2.34
6916 8105 3.096852 CCCTTGATCCCAAAACCTAACC 58.903 50.000 0.00 0.00 0.00 2.85
6917 8106 2.752903 CCTTGATCCCAAAACCTAACCG 59.247 50.000 0.00 0.00 0.00 4.44
6918 8107 2.500392 TGATCCCAAAACCTAACCGG 57.500 50.000 0.00 0.00 39.35 5.28
6928 8117 1.999648 ACCTAACCGGTACTCACACA 58.000 50.000 8.00 0.00 46.73 3.72
6929 8118 2.318908 ACCTAACCGGTACTCACACAA 58.681 47.619 8.00 0.00 46.73 3.33
6930 8119 2.901839 ACCTAACCGGTACTCACACAAT 59.098 45.455 8.00 0.00 46.73 2.71
6931 8120 4.088634 ACCTAACCGGTACTCACACAATA 58.911 43.478 8.00 0.00 46.73 1.90
6932 8121 4.082026 ACCTAACCGGTACTCACACAATAC 60.082 45.833 8.00 0.00 46.73 1.89
6933 8122 4.159135 CCTAACCGGTACTCACACAATACT 59.841 45.833 8.00 0.00 0.00 2.12
6934 8123 3.863142 ACCGGTACTCACACAATACTC 57.137 47.619 4.49 0.00 0.00 2.59
6935 8124 2.494870 ACCGGTACTCACACAATACTCC 59.505 50.000 4.49 0.00 0.00 3.85
6936 8125 2.159142 CCGGTACTCACACAATACTCCC 60.159 54.545 0.00 0.00 0.00 4.30
6937 8126 2.758979 CGGTACTCACACAATACTCCCT 59.241 50.000 0.00 0.00 0.00 4.20
6938 8127 3.181489 CGGTACTCACACAATACTCCCTC 60.181 52.174 0.00 0.00 0.00 4.30
6939 8128 3.132467 GGTACTCACACAATACTCCCTCC 59.868 52.174 0.00 0.00 0.00 4.30
6940 8129 1.825474 ACTCACACAATACTCCCTCCG 59.175 52.381 0.00 0.00 0.00 4.63
6941 8130 1.825474 CTCACACAATACTCCCTCCGT 59.175 52.381 0.00 0.00 0.00 4.69
6942 8131 2.233922 CTCACACAATACTCCCTCCGTT 59.766 50.000 0.00 0.00 0.00 4.44
6943 8132 2.232941 TCACACAATACTCCCTCCGTTC 59.767 50.000 0.00 0.00 0.00 3.95
6944 8133 1.553704 ACACAATACTCCCTCCGTTCC 59.446 52.381 0.00 0.00 0.00 3.62
6945 8134 1.831736 CACAATACTCCCTCCGTTCCT 59.168 52.381 0.00 0.00 0.00 3.36
6946 8135 2.236395 CACAATACTCCCTCCGTTCCTT 59.764 50.000 0.00 0.00 0.00 3.36
6947 8136 2.236395 ACAATACTCCCTCCGTTCCTTG 59.764 50.000 0.00 0.00 0.00 3.61
6948 8137 2.500098 CAATACTCCCTCCGTTCCTTGA 59.500 50.000 0.00 0.00 0.00 3.02
6949 8138 2.544844 TACTCCCTCCGTTCCTTGAT 57.455 50.000 0.00 0.00 0.00 2.57
6950 8139 2.544844 ACTCCCTCCGTTCCTTGATA 57.455 50.000 0.00 0.00 0.00 2.15
6951 8140 3.047695 ACTCCCTCCGTTCCTTGATAT 57.952 47.619 0.00 0.00 0.00 1.63
6952 8141 4.194678 ACTCCCTCCGTTCCTTGATATA 57.805 45.455 0.00 0.00 0.00 0.86
6953 8142 4.153411 ACTCCCTCCGTTCCTTGATATAG 58.847 47.826 0.00 0.00 0.00 1.31
6954 8143 3.507411 TCCCTCCGTTCCTTGATATAGG 58.493 50.000 0.00 0.00 36.59 2.57
6955 8144 2.567615 CCCTCCGTTCCTTGATATAGGG 59.432 54.545 0.00 0.00 36.73 3.53
6956 8145 3.240302 CCTCCGTTCCTTGATATAGGGT 58.760 50.000 0.00 0.00 35.90 4.34
6957 8146 3.006967 CCTCCGTTCCTTGATATAGGGTG 59.993 52.174 0.00 0.00 35.90 4.61
6958 8147 3.641906 CTCCGTTCCTTGATATAGGGTGT 59.358 47.826 0.00 0.00 35.90 4.16
6959 8148 4.806892 TCCGTTCCTTGATATAGGGTGTA 58.193 43.478 0.00 0.00 35.90 2.90
6960 8149 5.399991 TCCGTTCCTTGATATAGGGTGTAT 58.600 41.667 0.00 0.00 35.90 2.29
6961 8150 6.554784 TCCGTTCCTTGATATAGGGTGTATA 58.445 40.000 0.00 0.00 35.90 1.47
6962 8151 6.662234 TCCGTTCCTTGATATAGGGTGTATAG 59.338 42.308 0.00 0.00 35.90 1.31
6963 8152 6.436532 CCGTTCCTTGATATAGGGTGTATAGT 59.563 42.308 0.00 0.00 35.90 2.12
6964 8153 7.039223 CCGTTCCTTGATATAGGGTGTATAGTT 60.039 40.741 0.00 0.00 35.90 2.24
6965 8154 8.365647 CGTTCCTTGATATAGGGTGTATAGTTT 58.634 37.037 0.00 0.00 35.90 2.66
6968 8157 9.670442 TCCTTGATATAGGGTGTATAGTTTTCT 57.330 33.333 0.00 0.00 35.90 2.52
6971 8160 9.555727 TTGATATAGGGTGTATAGTTTTCTTGC 57.444 33.333 0.00 0.00 0.00 4.01
6972 8161 8.710239 TGATATAGGGTGTATAGTTTTCTTGCA 58.290 33.333 0.00 0.00 0.00 4.08
6973 8162 8.904099 ATATAGGGTGTATAGTTTTCTTGCAC 57.096 34.615 0.00 0.00 0.00 4.57
6974 8163 4.000988 AGGGTGTATAGTTTTCTTGCACG 58.999 43.478 0.00 0.00 30.90 5.34
6975 8164 3.998341 GGGTGTATAGTTTTCTTGCACGA 59.002 43.478 0.00 0.00 30.90 4.35
6976 8165 4.453136 GGGTGTATAGTTTTCTTGCACGAA 59.547 41.667 0.75 0.75 30.90 3.85
6977 8166 5.123344 GGGTGTATAGTTTTCTTGCACGAAT 59.877 40.000 6.45 0.00 30.90 3.34
6978 8167 6.314400 GGGTGTATAGTTTTCTTGCACGAATA 59.686 38.462 6.45 0.00 30.90 1.75
6979 8168 7.012044 GGGTGTATAGTTTTCTTGCACGAATAT 59.988 37.037 6.45 4.87 30.90 1.28
6980 8169 8.395633 GGTGTATAGTTTTCTTGCACGAATATT 58.604 33.333 6.45 1.87 30.90 1.28
6985 8174 5.793457 AGTTTTCTTGCACGAATATTAACGC 59.207 36.000 6.45 0.00 0.00 4.84
6986 8175 4.930463 TTCTTGCACGAATATTAACGCA 57.070 36.364 0.75 2.02 0.00 5.24
6987 8176 4.253352 TCTTGCACGAATATTAACGCAC 57.747 40.909 5.01 0.00 0.00 5.34
6988 8177 2.704974 TGCACGAATATTAACGCACG 57.295 45.000 0.00 0.00 0.00 5.34
6989 8178 1.325037 TGCACGAATATTAACGCACGG 59.675 47.619 0.00 0.00 0.00 4.94
6990 8179 1.332552 GCACGAATATTAACGCACGGG 60.333 52.381 0.00 0.00 0.00 5.28
6991 8180 0.932399 ACGAATATTAACGCACGGGC 59.068 50.000 0.00 0.00 0.00 6.13
6992 8181 1.214367 CGAATATTAACGCACGGGCT 58.786 50.000 8.62 0.00 38.10 5.19
6993 8182 1.070843 CGAATATTAACGCACGGGCTG 60.071 52.381 8.62 3.61 38.10 4.85
6994 8183 1.263217 GAATATTAACGCACGGGCTGG 59.737 52.381 8.62 0.00 38.10 4.85
6995 8184 0.534203 ATATTAACGCACGGGCTGGG 60.534 55.000 8.62 0.00 38.10 4.45
6996 8185 1.615165 TATTAACGCACGGGCTGGGA 61.615 55.000 8.62 0.00 38.10 4.37
6997 8186 2.869503 ATTAACGCACGGGCTGGGAG 62.870 60.000 8.62 0.00 38.10 4.30
7004 8193 4.888325 CGGGCTGGGAGGGGAGAT 62.888 72.222 0.00 0.00 0.00 2.75
7005 8194 2.368878 GGGCTGGGAGGGGAGATT 60.369 66.667 0.00 0.00 0.00 2.40
7006 8195 2.009302 GGGCTGGGAGGGGAGATTT 61.009 63.158 0.00 0.00 0.00 2.17
7007 8196 1.534203 GGCTGGGAGGGGAGATTTC 59.466 63.158 0.00 0.00 0.00 2.17
7008 8197 1.147153 GCTGGGAGGGGAGATTTCG 59.853 63.158 0.00 0.00 0.00 3.46
7009 8198 1.627297 GCTGGGAGGGGAGATTTCGT 61.627 60.000 0.00 0.00 0.00 3.85
7010 8199 0.912486 CTGGGAGGGGAGATTTCGTT 59.088 55.000 0.00 0.00 0.00 3.85
7011 8200 0.618458 TGGGAGGGGAGATTTCGTTG 59.382 55.000 0.00 0.00 0.00 4.10
7012 8201 0.107165 GGGAGGGGAGATTTCGTTGG 60.107 60.000 0.00 0.00 0.00 3.77
7013 8202 0.618981 GGAGGGGAGATTTCGTTGGT 59.381 55.000 0.00 0.00 0.00 3.67
7014 8203 1.004394 GGAGGGGAGATTTCGTTGGTT 59.996 52.381 0.00 0.00 0.00 3.67
7015 8204 2.554564 GGAGGGGAGATTTCGTTGGTTT 60.555 50.000 0.00 0.00 0.00 3.27
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
12 13 2.672381 ACAGCAACAACAACAAATGTGC 59.328 40.909 0.00 0.00 42.99 4.57
48 49 1.221021 GTCTCGGGATTGTGACCCC 59.779 63.158 0.00 0.00 44.09 4.95
49 50 1.153628 CGTCTCGGGATTGTGACCC 60.154 63.158 0.00 0.00 43.57 4.46
50 51 0.037605 AACGTCTCGGGATTGTGACC 60.038 55.000 0.00 0.00 0.00 4.02
57 58 0.959372 AGTCGTGAACGTCTCGGGAT 60.959 55.000 2.37 0.00 40.80 3.85
83 84 6.788218 AGAAAGAGAAATCTGGAAAGGATGT 58.212 36.000 0.00 0.00 0.00 3.06
90 91 6.042638 ACATCGAGAAAGAGAAATCTGGAA 57.957 37.500 0.00 0.00 34.70 3.53
91 92 5.667539 ACATCGAGAAAGAGAAATCTGGA 57.332 39.130 0.00 0.00 35.36 3.86
119 120 6.420588 AGACGAAGAAATCTAATACGACTCG 58.579 40.000 0.00 0.00 0.00 4.18
139 140 0.098025 GGAGCTCTTGAGTCGAGACG 59.902 60.000 14.64 4.56 36.20 4.18
169 170 4.715534 TGAATGTCCAAGTGGTCCTAAA 57.284 40.909 0.00 0.00 36.34 1.85
170 171 4.349636 TCTTGAATGTCCAAGTGGTCCTAA 59.650 41.667 0.00 0.00 42.95 2.69
178 179 4.101585 TCACTCACTCTTGAATGTCCAAGT 59.898 41.667 0.00 0.00 42.95 3.16
198 199 4.940046 CCCAGGAGCATATCACATATTCAC 59.060 45.833 0.00 0.00 0.00 3.18
210 211 5.257816 TCCTATATAAGGTCCCAGGAGCATA 59.742 44.000 17.64 10.62 46.62 3.14
222 223 5.094569 AGGCAACCTCTCCTATATAAGGT 57.905 43.478 0.00 0.00 43.96 3.50
239 241 6.418057 AGTTTTGGTCATTTATCAAGGCAA 57.582 33.333 0.00 0.00 27.46 4.52
283 285 7.430760 AGCTTTATCATCCTATCCCTCATAC 57.569 40.000 0.00 0.00 0.00 2.39
284 286 7.786943 CCTAGCTTTATCATCCTATCCCTCATA 59.213 40.741 0.00 0.00 0.00 2.15
285 287 6.614906 CCTAGCTTTATCATCCTATCCCTCAT 59.385 42.308 0.00 0.00 0.00 2.90
518 526 2.169974 CTCTGTCAACGACTCGATTCG 58.830 52.381 21.80 21.80 44.87 3.34
565 573 4.992688 TGTCTTCCAACACAATGAACAAC 58.007 39.130 0.00 0.00 0.00 3.32
571 579 7.202526 AGTACAAATTGTCTTCCAACACAATG 58.797 34.615 0.22 0.00 41.42 2.82
573 581 6.767524 AGTACAAATTGTCTTCCAACACAA 57.232 33.333 0.22 0.00 35.44 3.33
688 698 2.166829 GTGTGGTTAATGTGCCCATGA 58.833 47.619 0.00 0.00 0.00 3.07
791 985 0.675522 AAGGGACGGCAATGGTAACG 60.676 55.000 0.00 0.00 42.51 3.18
807 1001 2.499693 GAGGTGAGGAGAAAGGAGAAGG 59.500 54.545 0.00 0.00 0.00 3.46
809 1003 2.112691 AGGAGGTGAGGAGAAAGGAGAA 59.887 50.000 0.00 0.00 0.00 2.87
822 1016 1.305046 GGAGGAACGGAGGAGGTGA 60.305 63.158 0.00 0.00 0.00 4.02
828 1022 3.787001 GCAGGGGAGGAACGGAGG 61.787 72.222 0.00 0.00 0.00 4.30
912 1108 2.501610 GCGAGCTAGGGTTCTGGG 59.498 66.667 0.00 0.00 0.00 4.45
996 1192 2.222886 TCGGCTGCTAGACTCATAGAC 58.777 52.381 0.00 0.00 0.00 2.59
1152 1348 1.883926 TCATCGTCGTCCTCTTTGTCA 59.116 47.619 0.00 0.00 0.00 3.58
1156 1352 2.414293 CGTCTTCATCGTCGTCCTCTTT 60.414 50.000 0.00 0.00 0.00 2.52
1278 1474 3.009723 AGAACCGTGGAATACATGCTTG 58.990 45.455 0.00 0.00 34.66 4.01
1317 1513 4.727507 ACCTGCTAATGACTACACTGAG 57.272 45.455 0.00 0.00 0.00 3.35
1359 1555 4.564116 ACCGAATCTACCGCGCCG 62.564 66.667 0.00 0.00 0.00 6.46
1441 1637 2.527087 CGTCAAATGTTGCACGCATATG 59.473 45.455 0.00 0.00 31.41 1.78
1559 1756 7.047891 TCACATTCTCAAATAAGCGGAATACT 58.952 34.615 0.00 0.00 0.00 2.12
1602 1799 7.661536 AGGCACAGAGTAATCTAACTGAATA 57.338 36.000 0.00 0.00 34.88 1.75
1647 1949 4.323485 CCACAGCAGAATAGGGTAACTTCA 60.323 45.833 0.00 0.00 0.00 3.02
1738 2040 5.815581 ACATTCTAACATGGCTTGTCCTAA 58.184 37.500 6.48 2.34 37.68 2.69
1816 2118 2.093890 CATGCAAATGGAGTGCCTGTA 58.906 47.619 0.00 0.00 41.49 2.74
1900 2203 6.122782 GTGAATCGATGATGTAACACATTCG 58.877 40.000 0.00 6.93 39.27 3.34
1997 2302 6.594788 AACTATTTCATGCAGTGGTTTCAT 57.405 33.333 0.00 0.00 0.00 2.57
2035 2357 1.494721 ACTCTCTCACTGCCCCAAAAA 59.505 47.619 0.00 0.00 0.00 1.94
2036 2358 1.140312 ACTCTCTCACTGCCCCAAAA 58.860 50.000 0.00 0.00 0.00 2.44
2037 2359 0.397941 CACTCTCTCACTGCCCCAAA 59.602 55.000 0.00 0.00 0.00 3.28
2038 2360 0.764369 ACACTCTCTCACTGCCCCAA 60.764 55.000 0.00 0.00 0.00 4.12
2039 2361 0.114364 TACACTCTCTCACTGCCCCA 59.886 55.000 0.00 0.00 0.00 4.96
2040 2362 0.820871 CTACACTCTCTCACTGCCCC 59.179 60.000 0.00 0.00 0.00 5.80
2041 2363 1.551452 ACTACACTCTCTCACTGCCC 58.449 55.000 0.00 0.00 0.00 5.36
2042 2364 2.297597 ACAACTACACTCTCTCACTGCC 59.702 50.000 0.00 0.00 0.00 4.85
2043 2365 3.651803 ACAACTACACTCTCTCACTGC 57.348 47.619 0.00 0.00 0.00 4.40
2044 2366 5.188327 TCAACAACTACACTCTCTCACTG 57.812 43.478 0.00 0.00 0.00 3.66
2045 2367 5.536538 TCATCAACAACTACACTCTCTCACT 59.463 40.000 0.00 0.00 0.00 3.41
2046 2368 5.773575 TCATCAACAACTACACTCTCTCAC 58.226 41.667 0.00 0.00 0.00 3.51
2047 2369 6.405278 TTCATCAACAACTACACTCTCTCA 57.595 37.500 0.00 0.00 0.00 3.27
2048 2370 5.347364 GCTTCATCAACAACTACACTCTCTC 59.653 44.000 0.00 0.00 0.00 3.20
2049 2371 5.221521 TGCTTCATCAACAACTACACTCTCT 60.222 40.000 0.00 0.00 0.00 3.10
2189 2511 2.289569 GCATTTTTCATGGGGTCAGCAA 60.290 45.455 0.00 0.00 0.00 3.91
2292 2614 9.598517 AATGCTTTGAAAAATGAGACTAACAAA 57.401 25.926 0.00 0.00 0.00 2.83
2347 2669 5.826643 TGTCCCCTTGAAGTGCTAAATTAT 58.173 37.500 0.00 0.00 0.00 1.28
2358 2680 3.763360 TGCACAATAATGTCCCCTTGAAG 59.237 43.478 0.00 0.00 37.82 3.02
2359 2681 3.772387 TGCACAATAATGTCCCCTTGAA 58.228 40.909 0.00 0.00 37.82 2.69
2378 2700 7.816945 ACTATCAAAAATTAGTGCACATTGC 57.183 32.000 21.04 0.00 45.29 3.56
2379 2701 9.630098 AGAACTATCAAAAATTAGTGCACATTG 57.370 29.630 21.04 13.12 0.00 2.82
2455 2777 6.936900 GCCAGATTCTGCTATTAACCTGAATA 59.063 38.462 8.23 0.00 32.21 1.75
2471 2793 8.497910 TCTACAAATAAGGATAGCCAGATTCT 57.502 34.615 0.00 0.00 36.29 2.40
2547 2869 5.282055 AGTGGGTCTACATACATGACATG 57.718 43.478 14.02 14.02 32.84 3.21
2561 2883 5.892348 ACTGGATAAATTGAAAGTGGGTCT 58.108 37.500 0.00 0.00 0.00 3.85
3314 3699 9.337396 GATTCAGTTACATATATTGTGGACCAA 57.663 33.333 0.00 0.00 39.48 3.67
3330 3715 6.814146 AGAGAGAAATTGACGGATTCAGTTAC 59.186 38.462 0.00 0.00 33.19 2.50
3331 3716 6.936279 AGAGAGAAATTGACGGATTCAGTTA 58.064 36.000 0.00 0.00 33.19 2.24
3675 4476 5.791141 TCTGCCTATGATACTAGGGACTCTA 59.209 44.000 0.00 0.00 41.75 2.43
3770 4595 1.324740 GCAATCAGGATGGGCAGCAA 61.325 55.000 0.00 0.00 36.16 3.91
3836 4661 5.465390 GGGGTTTGAAGTTTTCTTATTGCAC 59.535 40.000 0.00 0.00 40.61 4.57
3930 4755 4.372999 AAAGGGCAGAGGGGCAGC 62.373 66.667 0.00 0.00 45.66 5.25
3968 4793 6.459435 GGGTTAGGAGAGTTACAAGACGATAC 60.459 46.154 0.00 0.00 0.00 2.24
3986 4811 1.450025 GCCTTCGAAACTGGGTTAGG 58.550 55.000 0.00 0.00 0.00 2.69
4014 4839 7.054751 ACTATGGCAAAGTTAAATCTACCCTC 58.945 38.462 0.00 0.00 0.00 4.30
4066 4891 6.324770 ACTTCCATCATATAAAAGCTTTGGGG 59.675 38.462 13.54 6.44 0.00 4.96
4067 4892 7.352079 ACTTCCATCATATAAAAGCTTTGGG 57.648 36.000 13.54 5.00 0.00 4.12
4093 5043 8.594550 ACAATAGAACCAGTATTACAAGACTGT 58.405 33.333 13.90 0.00 44.50 3.55
4666 5811 5.413309 AACAGGAAACATCAAAACCACAA 57.587 34.783 0.00 0.00 0.00 3.33
4711 5856 6.348458 GCTAGACACATTGTGCTGATACAAAA 60.348 38.462 16.62 0.00 43.13 2.44
4789 5935 7.877097 GCAAAGTAATGATATCTCTCCATCAGT 59.123 37.037 3.98 0.00 34.79 3.41
4900 6046 6.269315 ACGCTTCAGAACATCTAAGATAGTG 58.731 40.000 0.00 0.00 0.00 2.74
5141 6287 3.288242 GCCGACGCATAAAATACACATG 58.712 45.455 0.00 0.00 34.03 3.21
5159 6305 3.915437 ACAAATAACTTCTGTTGGCCG 57.085 42.857 0.00 0.00 37.59 6.13
5217 6363 1.973138 GTGCAGTGCTAAGCAACATG 58.027 50.000 17.60 0.00 43.20 3.21
5237 6383 3.499157 CCACAAAATGGTGATGGCAAAAG 59.501 43.478 0.00 0.00 44.46 2.27
5276 6422 7.923414 AGTAGCTTTACAAGTAAGAATTGGG 57.077 36.000 0.00 0.00 31.76 4.12
5392 6540 8.056400 AGTTAGTGACCTCTAGTTCATAGTGAT 58.944 37.037 0.00 0.00 32.85 3.06
5488 6636 7.120923 TGATTACCTACAGAACAGGGTATTC 57.879 40.000 0.00 0.00 37.51 1.75
5489 6637 7.402071 TCTTGATTACCTACAGAACAGGGTATT 59.598 37.037 0.00 0.00 37.51 1.89
5496 6644 5.091552 ACCCTCTTGATTACCTACAGAACA 58.908 41.667 0.00 0.00 0.00 3.18
5634 6782 2.125832 GAATCCACGTCCGCGGAA 60.126 61.111 32.93 15.31 43.45 4.30
5655 6803 1.277842 ACAGCGACAACATGGGTGATA 59.722 47.619 5.73 0.00 37.89 2.15
5790 6938 1.712056 TCTTCTTCACCTTCACGGGA 58.288 50.000 0.00 0.00 36.97 5.14
5796 6944 6.263168 TGTCCTTTTCATTCTTCTTCACCTTC 59.737 38.462 0.00 0.00 0.00 3.46
5802 6950 6.884280 TCCTTGTCCTTTTCATTCTTCTTC 57.116 37.500 0.00 0.00 0.00 2.87
5820 6968 3.678072 CAGCAGCAACATCATTTTCCTTG 59.322 43.478 0.00 0.00 0.00 3.61
5849 6997 5.354234 TCTTTATCCTTTTCATTCGCTGGAC 59.646 40.000 0.00 0.00 0.00 4.02
5851 6999 5.818136 TCTTTATCCTTTTCATTCGCTGG 57.182 39.130 0.00 0.00 0.00 4.85
5861 7009 9.918630 CAACAACATCATCTTCTTTATCCTTTT 57.081 29.630 0.00 0.00 0.00 2.27
5867 7015 7.458409 ACAGCAACAACATCATCTTCTTTAT 57.542 32.000 0.00 0.00 0.00 1.40
5943 7094 2.606725 CTGTTCATTCGCTGGATCAGTC 59.393 50.000 0.00 0.00 33.43 3.51
5971 7122 1.067516 AGCAGCAGCAACATCGTTTTT 59.932 42.857 3.17 0.00 45.49 1.94
6005 7156 8.321353 ACCAATTCTGTGTATCTTATGAGTTCA 58.679 33.333 0.00 0.00 0.00 3.18
6024 7175 6.143278 CCTTAAAACGTGCACTTAACCAATTC 59.857 38.462 16.19 0.00 0.00 2.17
6028 7179 3.315749 CCCTTAAAACGTGCACTTAACCA 59.684 43.478 16.19 0.00 0.00 3.67
6083 7234 2.433868 TTCTGTTCCACTGCTCGTAC 57.566 50.000 0.00 0.00 0.00 3.67
6137 7288 7.028926 TCGCAAGTACCAAAATTAACAGAAA 57.971 32.000 0.00 0.00 39.48 2.52
6140 7291 6.435428 AGTTCGCAAGTACCAAAATTAACAG 58.565 36.000 0.00 0.00 38.54 3.16
6163 7315 0.603707 TTTCAGACCAGCTGCCGAAG 60.604 55.000 8.66 0.00 44.52 3.79
6197 7349 5.185635 GCACCTATTAGAGATGCTCTGATCT 59.814 44.000 7.19 0.00 41.37 2.75
6226 7392 1.480954 TGCGTTTTTGGTGCCCTAAAA 59.519 42.857 8.64 8.64 36.30 1.52
6227 7393 1.112113 TGCGTTTTTGGTGCCCTAAA 58.888 45.000 0.00 0.00 0.00 1.85
6229 7395 0.885196 GATGCGTTTTTGGTGCCCTA 59.115 50.000 0.00 0.00 0.00 3.53
6230 7396 0.827507 AGATGCGTTTTTGGTGCCCT 60.828 50.000 0.00 0.00 0.00 5.19
6232 7398 0.388520 GGAGATGCGTTTTTGGTGCC 60.389 55.000 0.00 0.00 0.00 5.01
6233 7399 0.313672 TGGAGATGCGTTTTTGGTGC 59.686 50.000 0.00 0.00 0.00 5.01
6234 7400 2.791383 TTGGAGATGCGTTTTTGGTG 57.209 45.000 0.00 0.00 0.00 4.17
6236 7402 4.963276 TCTATTGGAGATGCGTTTTTGG 57.037 40.909 0.00 0.00 0.00 3.28
6428 7612 4.361420 TGTGTTGCATTTGATGTTGTGAG 58.639 39.130 0.00 0.00 0.00 3.51
6467 7651 8.730680 GTGGATGAACTTTATTGTATTGAGTGT 58.269 33.333 0.00 0.00 0.00 3.55
6518 7705 1.135689 CATGGCAAACAACGCTCCTAC 60.136 52.381 0.00 0.00 0.00 3.18
6524 7711 1.593750 TTGGCATGGCAAACAACGC 60.594 52.632 30.32 0.00 0.00 4.84
6532 7719 2.283101 GGAGTGGTTGGCATGGCA 60.283 61.111 19.43 19.43 0.00 4.92
6533 7720 1.683365 ATGGAGTGGTTGGCATGGC 60.683 57.895 13.29 13.29 0.00 4.40
6576 7765 7.066142 ACCATGACATTAGAGAGTCTGATACT 58.934 38.462 0.00 0.00 42.80 2.12
6683 7872 4.278170 AGAACGAGCATGGACAAAATTTGA 59.722 37.500 13.19 0.00 0.00 2.69
6748 7937 0.336737 AGGGGATCCTCGTCTGAACT 59.663 55.000 12.58 0.00 39.80 3.01
6753 7942 1.454111 CGTCAGGGGATCCTCGTCT 60.454 63.158 12.58 1.78 42.67 4.18
6754 7943 1.753463 ACGTCAGGGGATCCTCGTC 60.753 63.158 12.58 2.71 42.67 4.20
6755 7944 2.052690 CACGTCAGGGGATCCTCGT 61.053 63.158 12.58 11.76 42.67 4.18
6756 7945 2.786495 CCACGTCAGGGGATCCTCG 61.786 68.421 12.58 11.16 46.39 4.63
6757 7946 3.221222 CCACGTCAGGGGATCCTC 58.779 66.667 12.58 7.90 46.39 3.71
6765 7954 1.301716 CAGGACAACCCACGTCAGG 60.302 63.158 0.00 0.00 37.41 3.86
6766 7955 1.961277 GCAGGACAACCCACGTCAG 60.961 63.158 0.00 0.00 37.41 3.51
6767 7956 2.110213 GCAGGACAACCCACGTCA 59.890 61.111 0.00 0.00 37.41 4.35
6768 7957 2.668550 GGCAGGACAACCCACGTC 60.669 66.667 0.00 0.00 37.41 4.34
6769 7958 2.351924 AATGGCAGGACAACCCACGT 62.352 55.000 0.00 0.00 37.41 4.49
6770 7959 1.603455 AATGGCAGGACAACCCACG 60.603 57.895 0.00 0.00 37.41 4.94
6771 7960 0.539438 TCAATGGCAGGACAACCCAC 60.539 55.000 0.00 0.00 37.41 4.61
6772 7961 0.251297 CTCAATGGCAGGACAACCCA 60.251 55.000 0.00 0.00 37.41 4.51
6773 7962 0.038166 TCTCAATGGCAGGACAACCC 59.962 55.000 0.00 0.00 36.73 4.11
6774 7963 1.003580 TCTCTCAATGGCAGGACAACC 59.996 52.381 0.00 0.00 0.00 3.77
6775 7964 2.079925 GTCTCTCAATGGCAGGACAAC 58.920 52.381 0.00 0.00 0.00 3.32
6776 7965 1.980765 AGTCTCTCAATGGCAGGACAA 59.019 47.619 0.00 0.00 0.00 3.18
6777 7966 1.277273 CAGTCTCTCAATGGCAGGACA 59.723 52.381 0.00 0.00 0.00 4.02
6778 7967 1.552337 TCAGTCTCTCAATGGCAGGAC 59.448 52.381 0.00 0.00 0.00 3.85
6779 7968 1.552337 GTCAGTCTCTCAATGGCAGGA 59.448 52.381 0.00 0.00 0.00 3.86
6780 7969 1.277273 TGTCAGTCTCTCAATGGCAGG 59.723 52.381 0.00 0.00 0.00 4.85
6781 7970 2.289257 TGTGTCAGTCTCTCAATGGCAG 60.289 50.000 0.00 0.00 0.00 4.85
6782 7971 1.693606 TGTGTCAGTCTCTCAATGGCA 59.306 47.619 0.00 0.00 0.00 4.92
6783 7972 2.462456 TGTGTCAGTCTCTCAATGGC 57.538 50.000 0.00 0.00 0.00 4.40
6784 7973 3.055602 TCCATGTGTCAGTCTCTCAATGG 60.056 47.826 0.00 0.00 0.00 3.16
6785 7974 4.198028 TCCATGTGTCAGTCTCTCAATG 57.802 45.455 0.00 0.00 0.00 2.82
6786 7975 4.141756 GGATCCATGTGTCAGTCTCTCAAT 60.142 45.833 6.95 0.00 0.00 2.57
6787 7976 3.196469 GGATCCATGTGTCAGTCTCTCAA 59.804 47.826 6.95 0.00 0.00 3.02
6788 7977 2.762887 GGATCCATGTGTCAGTCTCTCA 59.237 50.000 6.95 0.00 0.00 3.27
6789 7978 2.102252 GGGATCCATGTGTCAGTCTCTC 59.898 54.545 15.23 0.00 0.00 3.20
6790 7979 2.114616 GGGATCCATGTGTCAGTCTCT 58.885 52.381 15.23 0.00 0.00 3.10
6791 7980 1.833630 TGGGATCCATGTGTCAGTCTC 59.166 52.381 15.23 0.00 0.00 3.36
6792 7981 1.556911 GTGGGATCCATGTGTCAGTCT 59.443 52.381 15.23 0.00 35.28 3.24
6793 7982 1.407437 GGTGGGATCCATGTGTCAGTC 60.407 57.143 15.23 0.00 35.28 3.51
6794 7983 0.620556 GGTGGGATCCATGTGTCAGT 59.379 55.000 15.23 0.00 35.28 3.41
6795 7984 0.620030 TGGTGGGATCCATGTGTCAG 59.380 55.000 15.23 0.00 35.28 3.51
6796 7985 1.004628 CTTGGTGGGATCCATGTGTCA 59.995 52.381 15.23 0.00 37.33 3.58
6797 7986 1.755179 CTTGGTGGGATCCATGTGTC 58.245 55.000 15.23 0.00 37.33 3.67
6798 7987 0.323725 GCTTGGTGGGATCCATGTGT 60.324 55.000 15.23 0.00 37.33 3.72
6799 7988 0.323633 TGCTTGGTGGGATCCATGTG 60.324 55.000 15.23 0.00 37.33 3.21
6800 7989 0.632835 ATGCTTGGTGGGATCCATGT 59.367 50.000 15.23 0.00 37.33 3.21
6801 7990 1.037493 CATGCTTGGTGGGATCCATG 58.963 55.000 15.23 1.90 37.33 3.66
6802 7991 0.105862 CCATGCTTGGTGGGATCCAT 60.106 55.000 15.23 0.00 38.30 3.41
6803 7992 1.307309 CCATGCTTGGTGGGATCCA 59.693 57.895 15.23 0.00 38.30 3.41
6804 7993 4.265206 CCATGCTTGGTGGGATCC 57.735 61.111 10.48 1.92 38.30 3.36
6809 7998 4.700448 TGGGCCCATGCTTGGTGG 62.700 66.667 24.45 4.42 41.91 4.61
6810 7999 3.384532 GTGGGCCCATGCTTGGTG 61.385 66.667 31.45 9.70 41.91 4.17
6813 8002 3.751246 CACGTGGGCCCATGCTTG 61.751 66.667 39.01 27.99 36.48 4.01
6814 8003 4.284550 ACACGTGGGCCCATGCTT 62.285 61.111 39.01 25.41 36.48 3.91
6815 8004 4.722700 GACACGTGGGCCCATGCT 62.723 66.667 39.01 26.45 36.48 3.79
6817 8006 2.747460 CTGACACGTGGGCCCATG 60.747 66.667 37.77 37.77 38.78 3.66
6818 8007 4.722700 GCTGACACGTGGGCCCAT 62.723 66.667 31.45 12.72 0.00 4.00
6824 8013 3.834447 TTCGGTCGCTGACACGTGG 62.834 63.158 21.57 2.89 33.68 4.94
6825 8014 1.876453 CTTTCGGTCGCTGACACGTG 61.876 60.000 15.48 15.48 33.68 4.49
6826 8015 1.660575 CTTTCGGTCGCTGACACGT 60.661 57.895 10.14 0.00 33.68 4.49
6827 8016 2.372690 CCTTTCGGTCGCTGACACG 61.373 63.158 10.14 10.44 33.68 4.49
6828 8017 2.668280 GCCTTTCGGTCGCTGACAC 61.668 63.158 10.14 0.92 33.68 3.67
6829 8018 2.357034 GCCTTTCGGTCGCTGACA 60.357 61.111 10.14 0.00 33.68 3.58
6830 8019 2.357034 TGCCTTTCGGTCGCTGAC 60.357 61.111 0.79 0.79 0.00 3.51
6831 8020 2.048222 CTGCCTTTCGGTCGCTGA 60.048 61.111 0.00 0.00 0.00 4.26
6832 8021 2.357517 ACTGCCTTTCGGTCGCTG 60.358 61.111 0.00 0.00 0.00 5.18
6833 8022 2.357517 CACTGCCTTTCGGTCGCT 60.358 61.111 0.00 0.00 30.14 4.93
6834 8023 1.503818 TTTCACTGCCTTTCGGTCGC 61.504 55.000 0.00 0.00 30.14 5.19
6835 8024 0.512952 CTTTCACTGCCTTTCGGTCG 59.487 55.000 0.00 0.00 30.14 4.79
6836 8025 1.531578 GACTTTCACTGCCTTTCGGTC 59.468 52.381 0.00 0.00 30.14 4.79
6837 8026 1.134220 TGACTTTCACTGCCTTTCGGT 60.134 47.619 0.00 0.00 33.70 4.69
6838 8027 1.532868 CTGACTTTCACTGCCTTTCGG 59.467 52.381 0.00 0.00 0.00 4.30
6839 8028 1.532868 CCTGACTTTCACTGCCTTTCG 59.467 52.381 0.00 0.00 0.00 3.46
6840 8029 1.882623 CCCTGACTTTCACTGCCTTTC 59.117 52.381 0.00 0.00 0.00 2.62
6841 8030 1.215423 ACCCTGACTTTCACTGCCTTT 59.785 47.619 0.00 0.00 0.00 3.11
6842 8031 0.846693 ACCCTGACTTTCACTGCCTT 59.153 50.000 0.00 0.00 0.00 4.35
6843 8032 0.846693 AACCCTGACTTTCACTGCCT 59.153 50.000 0.00 0.00 0.00 4.75
6844 8033 0.954452 CAACCCTGACTTTCACTGCC 59.046 55.000 0.00 0.00 0.00 4.85
6845 8034 0.954452 CCAACCCTGACTTTCACTGC 59.046 55.000 0.00 0.00 0.00 4.40
6846 8035 0.954452 GCCAACCCTGACTTTCACTG 59.046 55.000 0.00 0.00 0.00 3.66
6847 8036 0.846693 AGCCAACCCTGACTTTCACT 59.153 50.000 0.00 0.00 0.00 3.41
6848 8037 2.561478 TAGCCAACCCTGACTTTCAC 57.439 50.000 0.00 0.00 0.00 3.18
6849 8038 2.375174 ACATAGCCAACCCTGACTTTCA 59.625 45.455 0.00 0.00 0.00 2.69
6850 8039 3.010420 GACATAGCCAACCCTGACTTTC 58.990 50.000 0.00 0.00 0.00 2.62
6851 8040 2.375174 TGACATAGCCAACCCTGACTTT 59.625 45.455 0.00 0.00 0.00 2.66
6852 8041 1.985159 TGACATAGCCAACCCTGACTT 59.015 47.619 0.00 0.00 0.00 3.01
6853 8042 1.556911 CTGACATAGCCAACCCTGACT 59.443 52.381 0.00 0.00 0.00 3.41
6854 8043 1.555075 TCTGACATAGCCAACCCTGAC 59.445 52.381 0.00 0.00 0.00 3.51
6855 8044 1.833630 CTCTGACATAGCCAACCCTGA 59.166 52.381 0.00 0.00 0.00 3.86
6856 8045 1.134280 CCTCTGACATAGCCAACCCTG 60.134 57.143 0.00 0.00 0.00 4.45
6857 8046 1.207791 CCTCTGACATAGCCAACCCT 58.792 55.000 0.00 0.00 0.00 4.34
6858 8047 1.204146 TCCTCTGACATAGCCAACCC 58.796 55.000 0.00 0.00 0.00 4.11
6859 8048 2.224402 GGATCCTCTGACATAGCCAACC 60.224 54.545 3.84 0.00 0.00 3.77
6860 8049 2.546795 CGGATCCTCTGACATAGCCAAC 60.547 54.545 10.75 0.00 0.00 3.77
6861 8050 1.688735 CGGATCCTCTGACATAGCCAA 59.311 52.381 10.75 0.00 0.00 4.52
6862 8051 1.332195 CGGATCCTCTGACATAGCCA 58.668 55.000 10.75 0.00 0.00 4.75
6863 8052 1.000283 CACGGATCCTCTGACATAGCC 60.000 57.143 10.75 0.00 0.00 3.93
6864 8053 1.683917 ACACGGATCCTCTGACATAGC 59.316 52.381 10.75 0.00 0.00 2.97
6865 8054 2.294791 GGACACGGATCCTCTGACATAG 59.705 54.545 10.75 0.00 35.68 2.23
6866 8055 2.307768 GGACACGGATCCTCTGACATA 58.692 52.381 10.75 0.00 35.68 2.29
6867 8056 1.115467 GGACACGGATCCTCTGACAT 58.885 55.000 10.75 0.00 35.68 3.06
6868 8057 0.970937 GGGACACGGATCCTCTGACA 60.971 60.000 10.75 0.00 38.95 3.58
6869 8058 0.970937 TGGGACACGGATCCTCTGAC 60.971 60.000 10.75 5.30 38.95 3.51
6870 8059 0.252057 TTGGGACACGGATCCTCTGA 60.252 55.000 10.75 0.00 39.29 3.27
6871 8060 0.613260 TTTGGGACACGGATCCTCTG 59.387 55.000 10.75 7.45 39.29 3.35
6872 8061 1.279271 CTTTTGGGACACGGATCCTCT 59.721 52.381 10.75 0.00 39.29 3.69
6873 8062 1.003233 ACTTTTGGGACACGGATCCTC 59.997 52.381 10.75 0.00 39.29 3.71
6874 8063 1.064825 ACTTTTGGGACACGGATCCT 58.935 50.000 10.75 0.00 39.29 3.24
6875 8064 1.810755 GAACTTTTGGGACACGGATCC 59.189 52.381 0.00 0.00 39.29 3.36
6876 8065 1.810755 GGAACTTTTGGGACACGGATC 59.189 52.381 0.00 0.00 39.29 3.36
6877 8066 1.546998 GGGAACTTTTGGGACACGGAT 60.547 52.381 0.00 0.00 39.29 4.18
6878 8067 0.179012 GGGAACTTTTGGGACACGGA 60.179 55.000 0.00 0.00 39.29 4.69
6879 8068 0.179001 AGGGAACTTTTGGGACACGG 60.179 55.000 0.00 0.00 34.77 4.94
6880 8069 3.414486 AGGGAACTTTTGGGACACG 57.586 52.632 0.00 0.00 34.77 4.49
6892 8081 2.889512 AGGTTTTGGGATCAAGGGAAC 58.110 47.619 0.00 0.00 33.98 3.62
6893 8082 4.412843 GTTAGGTTTTGGGATCAAGGGAA 58.587 43.478 0.00 0.00 33.98 3.97
6894 8083 3.245479 GGTTAGGTTTTGGGATCAAGGGA 60.245 47.826 0.00 0.00 33.98 4.20
6895 8084 3.096852 GGTTAGGTTTTGGGATCAAGGG 58.903 50.000 0.00 0.00 33.98 3.95
6896 8085 2.752903 CGGTTAGGTTTTGGGATCAAGG 59.247 50.000 0.00 0.00 33.98 3.61
6897 8086 2.752903 CCGGTTAGGTTTTGGGATCAAG 59.247 50.000 0.00 0.00 32.71 3.02
6898 8087 2.797786 CCGGTTAGGTTTTGGGATCAA 58.202 47.619 0.00 0.00 34.51 2.57
6899 8088 2.500392 CCGGTTAGGTTTTGGGATCA 57.500 50.000 0.00 0.00 34.51 2.92
6911 8100 5.320549 AGTATTGTGTGAGTACCGGTTAG 57.679 43.478 15.04 0.00 0.00 2.34
6912 8101 4.158394 GGAGTATTGTGTGAGTACCGGTTA 59.842 45.833 15.04 0.00 0.00 2.85
6913 8102 3.056322 GGAGTATTGTGTGAGTACCGGTT 60.056 47.826 15.04 0.00 0.00 4.44
6914 8103 2.494870 GGAGTATTGTGTGAGTACCGGT 59.505 50.000 13.98 13.98 0.00 5.28
6915 8104 2.159142 GGGAGTATTGTGTGAGTACCGG 60.159 54.545 0.00 0.00 0.00 5.28
6916 8105 2.758979 AGGGAGTATTGTGTGAGTACCG 59.241 50.000 0.00 0.00 0.00 4.02
6917 8106 3.132467 GGAGGGAGTATTGTGTGAGTACC 59.868 52.174 0.00 0.00 0.00 3.34
6918 8107 3.181489 CGGAGGGAGTATTGTGTGAGTAC 60.181 52.174 0.00 0.00 0.00 2.73
6919 8108 3.021695 CGGAGGGAGTATTGTGTGAGTA 58.978 50.000 0.00 0.00 0.00 2.59
6920 8109 1.825474 CGGAGGGAGTATTGTGTGAGT 59.175 52.381 0.00 0.00 0.00 3.41
6921 8110 1.825474 ACGGAGGGAGTATTGTGTGAG 59.175 52.381 0.00 0.00 0.00 3.51
6922 8111 1.933021 ACGGAGGGAGTATTGTGTGA 58.067 50.000 0.00 0.00 0.00 3.58
6923 8112 2.618053 GAACGGAGGGAGTATTGTGTG 58.382 52.381 0.00 0.00 0.00 3.82
6924 8113 1.553704 GGAACGGAGGGAGTATTGTGT 59.446 52.381 0.00 0.00 0.00 3.72
6925 8114 1.831736 AGGAACGGAGGGAGTATTGTG 59.168 52.381 0.00 0.00 0.00 3.33
6926 8115 2.236395 CAAGGAACGGAGGGAGTATTGT 59.764 50.000 0.00 0.00 0.00 2.71
6927 8116 2.500098 TCAAGGAACGGAGGGAGTATTG 59.500 50.000 0.00 0.00 0.00 1.90
6928 8117 2.829023 TCAAGGAACGGAGGGAGTATT 58.171 47.619 0.00 0.00 0.00 1.89
6929 8118 2.544844 TCAAGGAACGGAGGGAGTAT 57.455 50.000 0.00 0.00 0.00 2.12
6930 8119 2.544844 ATCAAGGAACGGAGGGAGTA 57.455 50.000 0.00 0.00 0.00 2.59
6931 8120 2.544844 TATCAAGGAACGGAGGGAGT 57.455 50.000 0.00 0.00 0.00 3.85
6932 8121 3.511934 CCTATATCAAGGAACGGAGGGAG 59.488 52.174 0.00 0.00 39.15 4.30
6933 8122 3.507411 CCTATATCAAGGAACGGAGGGA 58.493 50.000 0.00 0.00 39.15 4.20
6934 8123 2.567615 CCCTATATCAAGGAACGGAGGG 59.432 54.545 0.00 0.00 39.15 4.30
6935 8124 3.006967 CACCCTATATCAAGGAACGGAGG 59.993 52.174 0.00 0.00 39.15 4.30
6936 8125 3.641906 ACACCCTATATCAAGGAACGGAG 59.358 47.826 0.00 0.00 39.15 4.63
6937 8126 3.649843 ACACCCTATATCAAGGAACGGA 58.350 45.455 0.00 0.00 39.15 4.69
6938 8127 5.740290 ATACACCCTATATCAAGGAACGG 57.260 43.478 0.00 0.00 39.15 4.44
6939 8128 7.463961 ACTATACACCCTATATCAAGGAACG 57.536 40.000 0.00 0.00 39.15 3.95
6942 8131 9.670442 AGAAAACTATACACCCTATATCAAGGA 57.330 33.333 0.00 0.00 39.15 3.36
6945 8134 9.555727 GCAAGAAAACTATACACCCTATATCAA 57.444 33.333 0.00 0.00 0.00 2.57
6946 8135 8.710239 TGCAAGAAAACTATACACCCTATATCA 58.290 33.333 0.00 0.00 0.00 2.15
6947 8136 8.989980 GTGCAAGAAAACTATACACCCTATATC 58.010 37.037 0.00 0.00 0.00 1.63
6948 8137 7.656137 CGTGCAAGAAAACTATACACCCTATAT 59.344 37.037 0.00 0.00 0.00 0.86
6949 8138 6.982141 CGTGCAAGAAAACTATACACCCTATA 59.018 38.462 0.00 0.00 0.00 1.31
6950 8139 5.815740 CGTGCAAGAAAACTATACACCCTAT 59.184 40.000 0.00 0.00 0.00 2.57
6951 8140 5.047164 TCGTGCAAGAAAACTATACACCCTA 60.047 40.000 0.00 0.00 0.00 3.53
6952 8141 4.000988 CGTGCAAGAAAACTATACACCCT 58.999 43.478 0.00 0.00 0.00 4.34
6953 8142 3.998341 TCGTGCAAGAAAACTATACACCC 59.002 43.478 0.00 0.00 0.00 4.61
6954 8143 5.600908 TTCGTGCAAGAAAACTATACACC 57.399 39.130 12.88 0.00 0.00 4.16
6959 8148 7.638683 GCGTTAATATTCGTGCAAGAAAACTAT 59.361 33.333 18.90 9.69 33.43 2.12
6960 8149 6.957077 GCGTTAATATTCGTGCAAGAAAACTA 59.043 34.615 18.90 7.79 33.43 2.24
6961 8150 5.793457 GCGTTAATATTCGTGCAAGAAAACT 59.207 36.000 18.90 5.73 33.43 2.66
6962 8151 5.566016 TGCGTTAATATTCGTGCAAGAAAAC 59.434 36.000 18.90 16.05 33.43 2.43
6963 8152 5.566016 GTGCGTTAATATTCGTGCAAGAAAA 59.434 36.000 18.90 6.17 33.67 2.29
6964 8153 5.083389 GTGCGTTAATATTCGTGCAAGAAA 58.917 37.500 18.90 9.03 33.67 2.52
6965 8154 4.643953 GTGCGTTAATATTCGTGCAAGAA 58.356 39.130 17.41 17.41 33.67 2.52
6966 8155 3.241836 CGTGCGTTAATATTCGTGCAAGA 60.242 43.478 12.83 0.00 34.49 3.02
6967 8156 3.019589 CGTGCGTTAATATTCGTGCAAG 58.980 45.455 9.23 8.08 33.67 4.01
6968 8157 2.222841 CCGTGCGTTAATATTCGTGCAA 60.223 45.455 9.23 0.00 33.67 4.08
6969 8158 1.325037 CCGTGCGTTAATATTCGTGCA 59.675 47.619 0.00 0.00 0.00 4.57
6970 8159 1.332552 CCCGTGCGTTAATATTCGTGC 60.333 52.381 0.00 0.00 0.00 5.34
6971 8160 1.332552 GCCCGTGCGTTAATATTCGTG 60.333 52.381 0.00 0.00 0.00 4.35
6972 8161 0.932399 GCCCGTGCGTTAATATTCGT 59.068 50.000 0.00 0.00 0.00 3.85
6973 8162 1.070843 CAGCCCGTGCGTTAATATTCG 60.071 52.381 0.00 0.00 44.33 3.34
6974 8163 1.263217 CCAGCCCGTGCGTTAATATTC 59.737 52.381 0.00 0.00 44.33 1.75
6975 8164 1.305201 CCAGCCCGTGCGTTAATATT 58.695 50.000 0.00 0.00 44.33 1.28
6976 8165 0.534203 CCCAGCCCGTGCGTTAATAT 60.534 55.000 0.00 0.00 44.33 1.28
6977 8166 1.153329 CCCAGCCCGTGCGTTAATA 60.153 57.895 0.00 0.00 44.33 0.98
6978 8167 2.437716 CCCAGCCCGTGCGTTAAT 60.438 61.111 0.00 0.00 44.33 1.40
6979 8168 3.599285 CTCCCAGCCCGTGCGTTAA 62.599 63.158 0.00 0.00 44.33 2.01
6980 8169 4.077184 CTCCCAGCCCGTGCGTTA 62.077 66.667 0.00 0.00 44.33 3.18
6987 8176 4.888325 ATCTCCCCTCCCAGCCCG 62.888 72.222 0.00 0.00 0.00 6.13
6988 8177 2.000825 GAAATCTCCCCTCCCAGCCC 62.001 65.000 0.00 0.00 0.00 5.19
6989 8178 1.534203 GAAATCTCCCCTCCCAGCC 59.466 63.158 0.00 0.00 0.00 4.85
6990 8179 1.147153 CGAAATCTCCCCTCCCAGC 59.853 63.158 0.00 0.00 0.00 4.85
6991 8180 0.912486 AACGAAATCTCCCCTCCCAG 59.088 55.000 0.00 0.00 0.00 4.45
6992 8181 0.618458 CAACGAAATCTCCCCTCCCA 59.382 55.000 0.00 0.00 0.00 4.37
6993 8182 0.107165 CCAACGAAATCTCCCCTCCC 60.107 60.000 0.00 0.00 0.00 4.30
6994 8183 0.618981 ACCAACGAAATCTCCCCTCC 59.381 55.000 0.00 0.00 0.00 4.30
6995 8184 2.491675 AACCAACGAAATCTCCCCTC 57.508 50.000 0.00 0.00 0.00 4.30
6996 8185 2.971901 AAACCAACGAAATCTCCCCT 57.028 45.000 0.00 0.00 0.00 4.79


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.