Multiple sequence alignment - TraesCS2B01G307400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G307400 chr2B 100.000 8879 0 0 1 8879 439879186 439888064 0.000000e+00 16397.0
1 TraesCS2B01G307400 chr2B 96.045 177 5 1 5205 5379 477564044 477563868 4.060000e-73 287.0
2 TraesCS2B01G307400 chr2D 91.095 2830 131 52 518 3298 370625023 370627780 0.000000e+00 3718.0
3 TraesCS2B01G307400 chr2D 95.983 1444 43 9 6469 7901 370631536 370632975 0.000000e+00 2331.0
4 TraesCS2B01G307400 chr2D 92.659 1512 58 24 3599 5075 370628599 370630092 0.000000e+00 2128.0
5 TraesCS2B01G307400 chr2D 92.699 1178 42 20 5314 6477 370630362 370631509 0.000000e+00 1659.0
6 TraesCS2B01G307400 chr2D 96.729 856 18 4 7919 8768 370632960 370633811 0.000000e+00 1417.0
7 TraesCS2B01G307400 chr2D 87.032 347 27 10 3 334 370624279 370624622 8.420000e-100 375.0
8 TraesCS2B01G307400 chr2D 87.313 268 16 9 3294 3546 370628247 370628511 3.140000e-74 291.0
9 TraesCS2B01G307400 chr2D 93.651 189 7 4 5122 5308 370630086 370630271 2.440000e-70 278.0
10 TraesCS2B01G307400 chr2D 83.854 192 20 8 6631 6815 630297338 630297151 1.190000e-38 172.0
11 TraesCS2B01G307400 chr2A 87.971 2178 126 57 747 2873 501566951 501569043 0.000000e+00 2446.0
12 TraesCS2B01G307400 chr2A 94.252 1444 55 15 6479 7901 501573373 501574809 0.000000e+00 2182.0
13 TraesCS2B01G307400 chr2A 92.863 1177 43 18 5314 6477 501572191 501573339 0.000000e+00 1670.0
14 TraesCS2B01G307400 chr2A 90.025 792 45 18 3854 4633 501570676 501571445 0.000000e+00 994.0
15 TraesCS2B01G307400 chr2A 93.089 463 16 6 4618 5071 501571465 501571920 0.000000e+00 664.0
16 TraesCS2B01G307400 chr2A 95.801 381 8 4 2924 3298 501569124 501569502 7.620000e-170 608.0
17 TraesCS2B01G307400 chr2A 82.729 689 66 27 7919 8561 501574794 501575475 1.670000e-156 564.0
18 TraesCS2B01G307400 chr2A 90.130 385 23 6 347 718 501566571 501566953 3.730000e-133 486.0
19 TraesCS2B01G307400 chr2A 87.784 352 23 13 1 333 501565955 501566305 2.320000e-105 394.0
20 TraesCS2B01G307400 chr2A 95.385 195 6 3 5122 5314 501571919 501572112 3.110000e-79 307.0
21 TraesCS2B01G307400 chr2A 87.097 279 16 9 3294 3561 501569986 501570255 1.870000e-76 298.0
22 TraesCS2B01G307400 chr2A 98.333 120 2 0 8760 8879 412916435 412916554 2.510000e-50 211.0
23 TraesCS2B01G307400 chr2A 82.745 255 13 7 3598 3821 501570330 501570584 1.960000e-46 198.0
24 TraesCS2B01G307400 chr2A 84.615 195 20 6 8569 8756 501578985 501579176 1.520000e-42 185.0
25 TraesCS2B01G307400 chr2A 83.648 159 23 2 6703 6858 655658619 655658777 7.180000e-31 147.0
26 TraesCS2B01G307400 chr2A 95.349 43 2 0 5088 5130 483604608 483604566 1.600000e-07 69.4
27 TraesCS2B01G307400 chr2A 92.000 50 3 1 5088 5137 680546358 680546406 1.600000e-07 69.4
28 TraesCS2B01G307400 chr7A 99.153 118 1 0 8762 8879 679383321 679383438 6.980000e-51 213.0
29 TraesCS2B01G307400 chr5B 98.319 119 2 0 8761 8879 138779318 138779436 9.030000e-50 209.0
30 TraesCS2B01G307400 chr5B 99.123 114 1 0 8766 8879 197783075 197782962 1.170000e-48 206.0
31 TraesCS2B01G307400 chr5B 95.455 44 2 0 5088 5131 249581856 249581899 4.450000e-08 71.3
32 TraesCS2B01G307400 chr4B 97.521 121 3 0 8759 8879 248167300 248167420 3.250000e-49 207.0
33 TraesCS2B01G307400 chr4A 97.521 121 3 0 8759 8879 385275764 385275884 3.250000e-49 207.0
34 TraesCS2B01G307400 chr3D 96.094 128 3 2 8754 8879 609956823 609956950 3.250000e-49 207.0
35 TraesCS2B01G307400 chr6A 94.118 136 7 1 8744 8879 490438025 490438159 1.170000e-48 206.0
36 TraesCS2B01G307400 chr7B 98.246 114 2 0 8766 8879 282361256 282361143 5.440000e-47 200.0
37 TraesCS2B01G307400 chr7B 84.302 172 22 4 6692 6858 484915885 484916056 7.130000e-36 163.0
38 TraesCS2B01G307400 chr7B 84.302 172 22 4 6692 6858 484921157 484921328 7.130000e-36 163.0
39 TraesCS2B01G307400 chr7B 82.166 157 22 5 6620 6773 591211686 591211839 7.230000e-26 130.0
40 TraesCS2B01G307400 chr7B 85.246 61 4 4 5073 5133 500725999 500725944 3.460000e-04 58.4
41 TraesCS2B01G307400 chr3B 84.118 170 23 3 6692 6858 734586762 734586594 2.570000e-35 161.0
42 TraesCS2B01G307400 chr1D 81.910 199 26 7 6620 6812 96116477 96116671 9.230000e-35 159.0
43 TraesCS2B01G307400 chr1D 95.455 44 2 0 5087 5130 340456198 340456155 4.450000e-08 71.3
44 TraesCS2B01G307400 chr6D 85.612 139 15 4 6724 6858 395366742 395366605 3.340000e-29 141.0
45 TraesCS2B01G307400 chr5A 83.553 152 23 2 6623 6773 140893747 140893597 3.340000e-29 141.0
46 TraesCS2B01G307400 chr6B 92.157 51 2 2 5088 5138 48874076 48874028 4.450000e-08 71.3
47 TraesCS2B01G307400 chr5D 95.455 44 2 0 5088 5131 223299455 223299412 4.450000e-08 71.3
48 TraesCS2B01G307400 chr3A 95.455 44 2 0 5090 5133 163801524 163801481 4.450000e-08 71.3
49 TraesCS2B01G307400 chr7D 91.667 48 3 1 5088 5134 29876413 29876366 2.070000e-06 65.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G307400 chr2B 439879186 439888064 8878 False 16397.000000 16397 100.000000 1 8879 1 chr2B.!!$F1 8878
1 TraesCS2B01G307400 chr2D 370624279 370633811 9532 False 1524.625000 3718 92.145125 3 8768 8 chr2D.!!$F1 8765
2 TraesCS2B01G307400 chr2A 501565955 501579176 13221 False 845.846154 2446 89.575846 1 8756 13 chr2A.!!$F4 8755

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
744 1083 0.178891 ACCCTGCTTTGAGAGAGGGA 60.179 55.0 9.96 0.00 41.60 4.20 F
1768 2154 0.321653 TTGCCGGCCTTCTTCTCTTC 60.322 55.0 26.77 0.00 0.00 2.87 F
3592 4559 0.170561 GCTCTAGCAACCGTCGAAGA 59.829 55.0 0.00 0.00 41.59 2.87 F
4129 5224 0.116342 TGTCTAGCCCAGAGGGTGAA 59.884 55.0 3.68 0.00 46.51 3.18 F
5402 6657 0.250684 TGAACGGAAATCAGCCTGCA 60.251 50.0 0.00 0.00 0.00 4.41 F
5848 7113 0.109412 CTGGACTGGACGACGGTAAC 60.109 60.0 0.00 0.00 39.29 2.50 F
5851 7116 0.595095 GACTGGACGACGGTAACAGT 59.405 55.0 13.26 13.26 43.22 3.55 F
7204 8512 0.037139 CCGGGTAATGACGTTGACCA 60.037 55.0 0.00 0.00 33.33 4.02 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2538 2951 0.389817 GGTGTCGTGTCAGCTGCATA 60.390 55.0 9.47 0.85 33.69 3.14 R
3602 4569 0.038166 TCTCCCTGATGTTTGCCACC 59.962 55.0 0.00 0.00 0.00 4.61 R
5485 6746 0.391130 CCGGAAGAAACGATCCAGCA 60.391 55.0 0.00 0.00 35.34 4.41 R
5829 7094 0.109412 GTTACCGTCGTCCAGTCCAG 60.109 60.0 0.00 0.00 0.00 3.86 R
7197 8505 0.884704 ATCGGCACAGTGTGGTCAAC 60.885 55.0 24.24 7.30 33.64 3.18 R
7204 8512 2.479566 AAAGATCATCGGCACAGTGT 57.520 45.0 1.61 0.00 0.00 3.55 R
7412 8726 3.152341 GCCATGAATGAAGATGGGTAGG 58.848 50.0 0.00 0.00 39.75 3.18 R
8858 13746 0.179037 TGCTATCCATGTGCCAGAGC 60.179 55.0 0.00 0.00 40.48 4.09 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
81 87 0.316204 CTTCCTTGGCTGGCTGTTTG 59.684 55.000 2.00 0.00 0.00 2.93
405 696 2.268076 GGGCGAGCCTCAAAGCAAA 61.268 57.895 14.33 0.00 36.10 3.68
406 697 1.598701 GGGCGAGCCTCAAAGCAAAT 61.599 55.000 14.33 0.00 36.10 2.32
412 703 1.150827 GCCTCAAAGCAAATGCCAAC 58.849 50.000 0.94 0.00 43.38 3.77
572 908 1.105457 AAAGCACTCAGTTTGCAGCA 58.895 45.000 0.00 0.00 42.83 4.41
610 946 3.749665 TTTGATCCACCAAAGCAAAGG 57.250 42.857 0.00 0.00 32.77 3.11
617 953 0.398381 ACCAAAGCAAAGGCCTTCCA 60.398 50.000 20.79 0.00 42.56 3.53
643 979 8.534496 ACAATAATAAGAATCCAAAGCAAAGCT 58.466 29.630 0.00 0.00 42.56 3.74
649 985 2.645838 TCCAAAGCAAAGCTGTCTCT 57.354 45.000 0.00 0.00 39.62 3.10
669 1005 5.248248 TCTCTTCTCATCCACAAACACCATA 59.752 40.000 0.00 0.00 0.00 2.74
670 1006 5.491070 TCTTCTCATCCACAAACACCATAG 58.509 41.667 0.00 0.00 0.00 2.23
673 1009 1.750778 CATCCACAAACACCATAGCCC 59.249 52.381 0.00 0.00 0.00 5.19
720 1059 1.802069 GAAAGCATCTCCTATCCGCC 58.198 55.000 0.00 0.00 0.00 6.13
721 1060 0.398318 AAAGCATCTCCTATCCGCCC 59.602 55.000 0.00 0.00 0.00 6.13
736 1075 3.646715 CCCCGGACCCTGCTTTGA 61.647 66.667 0.73 0.00 0.00 2.69
744 1083 0.178891 ACCCTGCTTTGAGAGAGGGA 60.179 55.000 9.96 0.00 41.60 4.20
745 1084 0.540923 CCCTGCTTTGAGAGAGGGAG 59.459 60.000 0.00 0.00 41.60 4.30
777 1116 1.479709 CACACCACTTCCACCCAAAA 58.520 50.000 0.00 0.00 0.00 2.44
828 1167 1.796151 CACACGCGCCAATCAATCT 59.204 52.632 5.73 0.00 0.00 2.40
858 1197 0.875728 AGGACATCGATCGACCGATC 59.124 55.000 22.06 19.20 46.26 3.69
1047 1395 2.224209 ACAACAAAACGATCCGACTCCT 60.224 45.455 0.00 0.00 0.00 3.69
1048 1396 3.006110 ACAACAAAACGATCCGACTCCTA 59.994 43.478 0.00 0.00 0.00 2.94
1049 1397 3.227810 ACAAAACGATCCGACTCCTAC 57.772 47.619 0.00 0.00 0.00 3.18
1050 1398 2.094338 ACAAAACGATCCGACTCCTACC 60.094 50.000 0.00 0.00 0.00 3.18
1051 1399 1.843368 AAACGATCCGACTCCTACCA 58.157 50.000 0.00 0.00 0.00 3.25
1052 1400 1.390565 AACGATCCGACTCCTACCAG 58.609 55.000 0.00 0.00 0.00 4.00
1053 1401 0.545171 ACGATCCGACTCCTACCAGA 59.455 55.000 0.00 0.00 0.00 3.86
1054 1402 1.231221 CGATCCGACTCCTACCAGAG 58.769 60.000 0.00 0.00 39.91 3.35
1074 1422 4.507916 CTCGCCGAGGGAGGGAGA 62.508 72.222 6.13 0.00 38.66 3.71
1088 1443 1.279271 AGGGAGAGCACACACATAACC 59.721 52.381 0.00 0.00 0.00 2.85
1112 1467 2.428890 CCAACGAAGCCAGAGAGATACT 59.571 50.000 0.00 0.00 0.00 2.12
1113 1468 3.490078 CCAACGAAGCCAGAGAGATACTC 60.490 52.174 0.00 0.00 45.22 2.59
1114 1469 2.303175 ACGAAGCCAGAGAGATACTCC 58.697 52.381 0.00 0.00 45.96 3.85
1169 1533 2.440430 CGCGAGGAGGAGGAGGAA 60.440 66.667 0.00 0.00 0.00 3.36
1171 1535 2.776913 GCGAGGAGGAGGAGGAACG 61.777 68.421 0.00 0.00 0.00 3.95
1287 1653 2.526046 CCGTGGGGGAAAGTGGAGT 61.526 63.158 0.00 0.00 38.47 3.85
1480 1850 3.943034 CGGCTCGTCTCGCTCGAT 61.943 66.667 0.00 0.00 36.73 3.59
1523 1896 1.355916 GTACGTGCCGCCAACAAAA 59.644 52.632 0.00 0.00 0.00 2.44
1534 1910 1.542328 GCCAACAAAATCCCCGCTTTT 60.542 47.619 0.00 0.00 0.00 2.27
1536 1912 3.804063 GCCAACAAAATCCCCGCTTTTAA 60.804 43.478 0.00 0.00 0.00 1.52
1542 1918 4.365899 AAATCCCCGCTTTTAATTCGTC 57.634 40.909 0.00 0.00 0.00 4.20
1549 1926 3.339695 CGCTTTTAATTCGTCTTACGGC 58.660 45.455 0.00 0.00 42.81 5.68
1555 1932 2.665649 ATTCGTCTTACGGCATCACA 57.334 45.000 0.00 0.00 42.81 3.58
1591 1968 6.587990 CGTTCTTTGCGATATTCCTGATATCT 59.412 38.462 3.98 0.00 42.94 1.98
1687 2069 2.564062 CCCTGCAACCAAAGACATCATT 59.436 45.455 0.00 0.00 0.00 2.57
1691 2073 5.183713 CCTGCAACCAAAGACATCATTCTTA 59.816 40.000 0.00 0.00 34.60 2.10
1711 2093 3.225798 GCCACTGCCAGCCAAACA 61.226 61.111 0.00 0.00 0.00 2.83
1768 2154 0.321653 TTGCCGGCCTTCTTCTCTTC 60.322 55.000 26.77 0.00 0.00 2.87
1769 2155 1.296715 GCCGGCCTTCTTCTCTTCA 59.703 57.895 18.11 0.00 0.00 3.02
1770 2156 1.021920 GCCGGCCTTCTTCTCTTCAC 61.022 60.000 18.11 0.00 0.00 3.18
1771 2157 0.610687 CCGGCCTTCTTCTCTTCACT 59.389 55.000 0.00 0.00 0.00 3.41
1772 2158 1.002544 CCGGCCTTCTTCTCTTCACTT 59.997 52.381 0.00 0.00 0.00 3.16
1795 2181 5.923733 TTCCCTTTTTGTCTGCACTTAAA 57.076 34.783 0.00 0.00 0.00 1.52
1796 2182 5.257082 TCCCTTTTTGTCTGCACTTAAAC 57.743 39.130 0.00 0.00 0.00 2.01
1797 2183 4.953579 TCCCTTTTTGTCTGCACTTAAACT 59.046 37.500 0.00 0.00 0.00 2.66
1798 2184 6.123651 TCCCTTTTTGTCTGCACTTAAACTA 58.876 36.000 0.00 0.00 0.00 2.24
1799 2185 6.262273 TCCCTTTTTGTCTGCACTTAAACTAG 59.738 38.462 0.00 0.00 0.00 2.57
1821 2207 9.978336 ACTAGACTAGTAGAGTAACCAAAAGAT 57.022 33.333 13.63 0.00 39.06 2.40
1835 2221 6.749923 ACCAAAAGATAGCAGAGTTGATTC 57.250 37.500 0.00 0.00 0.00 2.52
1856 2242 4.323417 TCAACCAACCACATGATCACTAC 58.677 43.478 0.00 0.00 0.00 2.73
1864 2250 6.701145 ACCACATGATCACTACTAGTACAG 57.299 41.667 0.00 0.00 0.00 2.74
1871 2257 9.823647 CATGATCACTACTAGTACAGGATTTTT 57.176 33.333 0.00 0.00 0.00 1.94
1918 2319 0.798776 CGAGGCATGACAAGTTGTCC 59.201 55.000 28.67 16.63 46.40 4.02
1929 2330 5.706916 TGACAAGTTGTCCGAGTTATAGTC 58.293 41.667 28.67 4.78 46.40 2.59
1930 2331 5.242171 TGACAAGTTGTCCGAGTTATAGTCA 59.758 40.000 28.67 7.23 46.40 3.41
1931 2332 5.710984 ACAAGTTGTCCGAGTTATAGTCAG 58.289 41.667 1.64 0.00 0.00 3.51
1932 2333 4.985538 AGTTGTCCGAGTTATAGTCAGG 57.014 45.455 0.00 0.00 0.00 3.86
1970 2373 3.759086 CGTATGATTGCCTAGCTCCTCTA 59.241 47.826 0.00 0.00 0.00 2.43
1979 2382 1.642513 TAGCTCCTCTACTGGGCGGA 61.643 60.000 0.00 0.00 0.00 5.54
2002 2411 1.743252 CTTCAAGCTCCGACTGCCC 60.743 63.158 0.00 0.00 0.00 5.36
2018 2427 3.055094 ACTGCCCATGTTTCCTACTACAG 60.055 47.826 0.00 0.00 0.00 2.74
2019 2428 2.910319 TGCCCATGTTTCCTACTACAGT 59.090 45.455 0.00 0.00 0.00 3.55
2025 2434 4.785511 TGTTTCCTACTACAGTCTCTGC 57.214 45.455 0.00 0.00 34.37 4.26
2026 2435 4.408276 TGTTTCCTACTACAGTCTCTGCT 58.592 43.478 0.00 0.00 34.37 4.24
2027 2436 4.459685 TGTTTCCTACTACAGTCTCTGCTC 59.540 45.833 0.00 0.00 34.37 4.26
2028 2437 4.577988 TTCCTACTACAGTCTCTGCTCT 57.422 45.455 0.00 0.00 34.37 4.09
2029 2438 5.695424 TTCCTACTACAGTCTCTGCTCTA 57.305 43.478 0.00 0.00 34.37 2.43
2030 2439 5.695424 TCCTACTACAGTCTCTGCTCTAA 57.305 43.478 0.00 0.00 34.37 2.10
2098 2507 1.390123 CACAACACGTCTTGATAGCCG 59.610 52.381 10.70 0.00 0.00 5.52
2134 2543 1.071019 ACGACAGTTATGCGACGCAG 61.071 55.000 28.10 16.02 43.65 5.18
2279 2688 1.002468 CCGGCTCGCAATAGGAAAATG 60.002 52.381 0.00 0.00 0.00 2.32
2285 2694 3.211045 TCGCAATAGGAAAATGCCCTAC 58.789 45.455 0.00 0.00 38.94 3.18
2302 2711 2.268298 CTACTTGCAAGCGTACGGAAT 58.732 47.619 26.27 6.02 0.00 3.01
2348 2757 0.806868 CACACGGCAGAATTCATGCT 59.193 50.000 21.34 7.45 43.35 3.79
2349 2761 1.089920 ACACGGCAGAATTCATGCTC 58.910 50.000 21.34 14.12 43.35 4.26
2370 2782 8.211030 TGCTCTAGTAGTATATACCCTGTGTA 57.789 38.462 9.32 0.00 0.00 2.90
2416 2828 9.982651 TGAATTTGTTGGATACGGAAATAAAAA 57.017 25.926 0.00 0.00 42.51 1.94
2538 2951 4.494350 AAAGGATATCGCGTACGTACAT 57.506 40.909 24.50 13.36 41.18 2.29
2557 2970 0.389817 TATGCAGCTGACACGACACC 60.390 55.000 20.43 0.00 0.00 4.16
2595 3008 9.067986 GTAGATCCCTCGAAATAAAATTTCCAT 57.932 33.333 6.76 0.00 0.00 3.41
2621 3039 4.437682 AGAGATGTGGAACTGGTGAAAA 57.562 40.909 0.00 0.00 38.04 2.29
2663 3081 1.372087 GCCAGGCGAGAGAATTGGTG 61.372 60.000 0.00 0.00 32.30 4.17
2728 3146 5.120674 CGAACAAGATGAATAGCACAGTTCA 59.879 40.000 0.00 0.00 38.57 3.18
2733 3151 8.362639 ACAAGATGAATAGCACAGTTCATTTTT 58.637 29.630 2.55 0.00 43.16 1.94
2748 3166 7.861372 CAGTTCATTTTTGGAGAGATGCATATC 59.139 37.037 13.51 13.51 0.00 1.63
2759 3177 3.993081 GAGATGCATATCTACAGTGTGGC 59.007 47.826 14.07 0.82 43.63 5.01
2760 3178 3.389002 AGATGCATATCTACAGTGTGGCA 59.611 43.478 5.88 6.53 41.82 4.92
2763 3181 4.129380 TGCATATCTACAGTGTGGCAATC 58.871 43.478 5.88 0.00 0.00 2.67
2826 3244 5.286438 GTCAACTGGGATTTTGTAAACCAC 58.714 41.667 0.00 0.00 0.00 4.16
2867 3285 7.177392 ACTTCCATTTTAGTGAAAAGCATAGCT 59.823 33.333 0.00 0.00 42.56 3.32
2888 3306 5.364735 AGCTCAATTTAAAGATGGATTGGGG 59.635 40.000 0.00 0.00 32.05 4.96
3129 3579 2.898472 ATTCCCCGACCCTGGAGGAG 62.898 65.000 0.00 0.00 39.89 3.69
3138 3588 3.790437 CTGGAGGAGGCATGGCGT 61.790 66.667 14.30 2.30 0.00 5.68
3327 4278 0.795085 GATCGTGCAGCCTGATATGC 59.205 55.000 0.00 0.00 42.86 3.14
3397 4358 2.352960 CCATTAGTTTTCTCAGCTCCGC 59.647 50.000 0.00 0.00 0.00 5.54
3408 4369 4.400961 GCTCCGCTTGCCCTGACT 62.401 66.667 0.00 0.00 0.00 3.41
3424 4391 4.103103 CTGCGTCGCACCGAGAGA 62.103 66.667 17.58 0.00 36.23 3.10
3433 4400 0.457681 GCACCGAGAGAGAGAAGCAC 60.458 60.000 0.00 0.00 0.00 4.40
3437 4404 0.376852 CGAGAGAGAGAAGCACGAGG 59.623 60.000 0.00 0.00 0.00 4.63
3531 4498 2.032528 AGGCACCATCACCACACG 59.967 61.111 0.00 0.00 0.00 4.49
3548 4515 4.090066 CCACACGCGAGCAAGATAATATAC 59.910 45.833 15.93 0.00 0.00 1.47
3553 4520 7.042051 ACACGCGAGCAAGATAATATACAATTT 60.042 33.333 15.93 0.00 0.00 1.82
3557 4524 9.322776 GCGAGCAAGATAATATACAATTTTCAG 57.677 33.333 0.00 0.00 0.00 3.02
3570 4537 8.779354 ATACAATTTTCAGTCCTGAGAACTAC 57.221 34.615 2.73 0.00 41.13 2.73
3571 4538 6.831976 ACAATTTTCAGTCCTGAGAACTACT 58.168 36.000 2.73 0.00 41.13 2.57
3572 4539 6.708054 ACAATTTTCAGTCCTGAGAACTACTG 59.292 38.462 2.73 0.00 41.13 2.74
3573 4540 4.873746 TTTCAGTCCTGAGAACTACTGG 57.126 45.455 0.00 0.00 41.13 4.00
3576 4543 2.165437 CAGTCCTGAGAACTACTGGCTC 59.835 54.545 0.00 0.00 36.53 4.70
3577 4544 2.042433 AGTCCTGAGAACTACTGGCTCT 59.958 50.000 0.00 0.00 0.00 4.09
3578 4545 3.267291 AGTCCTGAGAACTACTGGCTCTA 59.733 47.826 0.00 0.00 0.00 2.43
3579 4546 3.630312 GTCCTGAGAACTACTGGCTCTAG 59.370 52.174 0.00 0.00 0.00 2.43
3581 4548 3.020274 CTGAGAACTACTGGCTCTAGCA 58.980 50.000 4.07 0.00 44.36 3.49
3583 4550 3.193691 TGAGAACTACTGGCTCTAGCAAC 59.806 47.826 4.07 0.00 44.36 4.17
3585 4552 0.818296 ACTACTGGCTCTAGCAACCG 59.182 55.000 4.07 0.00 44.36 4.44
3586 4553 0.818296 CTACTGGCTCTAGCAACCGT 59.182 55.000 4.07 0.00 44.36 4.83
3587 4554 0.815734 TACTGGCTCTAGCAACCGTC 59.184 55.000 4.07 0.00 44.36 4.79
3588 4555 1.517257 CTGGCTCTAGCAACCGTCG 60.517 63.158 4.07 0.00 44.36 5.12
3589 4556 1.934220 CTGGCTCTAGCAACCGTCGA 61.934 60.000 4.07 0.00 44.36 4.20
3590 4557 1.214589 GGCTCTAGCAACCGTCGAA 59.785 57.895 4.07 0.00 44.36 3.71
3591 4558 0.802607 GGCTCTAGCAACCGTCGAAG 60.803 60.000 4.07 0.00 44.36 3.79
3592 4559 0.170561 GCTCTAGCAACCGTCGAAGA 59.829 55.000 0.00 0.00 41.59 2.87
3593 4560 1.402456 GCTCTAGCAACCGTCGAAGAA 60.402 52.381 0.00 0.00 38.93 2.52
3594 4561 2.925306 GCTCTAGCAACCGTCGAAGAAA 60.925 50.000 0.00 0.00 38.93 2.52
3596 4563 3.719924 TCTAGCAACCGTCGAAGAAAAA 58.280 40.909 0.00 0.00 39.69 1.94
3773 4808 1.737793 GTCATGGTCCTGTTTAAGCCG 59.262 52.381 0.00 0.00 0.00 5.52
3803 4838 5.922544 TGAAAGTTAGTAACACGGTAGCTTC 59.077 40.000 15.28 0.00 0.00 3.86
3811 4878 5.653769 AGTAACACGGTAGCTTCATTAGGTA 59.346 40.000 0.00 0.00 35.80 3.08
3848 4915 1.729838 GTCGTGTCGTGCTCCAGAC 60.730 63.158 0.00 0.00 37.85 3.51
4038 5133 2.817258 TCCAATGGACCGAAAATGACAC 59.183 45.455 0.00 0.00 0.00 3.67
4039 5134 2.094752 CCAATGGACCGAAAATGACACC 60.095 50.000 0.00 0.00 0.00 4.16
4105 5200 2.827322 TCCAAATCCAAGTGATTGGCTG 59.173 45.455 2.03 0.61 42.97 4.85
4129 5224 0.116342 TGTCTAGCCCAGAGGGTGAA 59.884 55.000 3.68 0.00 46.51 3.18
4158 5259 1.079503 GTCTGACGAAGCAACCCATC 58.920 55.000 0.00 0.00 0.00 3.51
4182 5283 0.804989 CCTGAATGCCGTCCACTTTC 59.195 55.000 0.00 0.00 0.00 2.62
4203 5304 4.242475 TCTGCAAGACCAAATACTGTACG 58.758 43.478 0.00 0.00 38.67 3.67
4204 5305 2.739913 TGCAAGACCAAATACTGTACGC 59.260 45.455 0.00 0.00 0.00 4.42
4205 5306 2.739913 GCAAGACCAAATACTGTACGCA 59.260 45.455 0.00 0.00 0.00 5.24
4209 5310 5.545658 AGACCAAATACTGTACGCAATTG 57.454 39.130 0.00 0.00 0.00 2.32
4210 5311 5.242434 AGACCAAATACTGTACGCAATTGA 58.758 37.500 10.34 0.00 0.00 2.57
4216 5317 7.011950 CCAAATACTGTACGCAATTGATCCTAA 59.988 37.037 10.34 0.00 0.00 2.69
4217 5318 8.559536 CAAATACTGTACGCAATTGATCCTAAT 58.440 33.333 10.34 0.00 0.00 1.73
4261 5383 3.121406 TTGCCGCCCCACTGTGTTA 62.121 57.895 7.08 0.00 0.00 2.41
4266 5388 1.670083 GCCCCACTGTGTTACGTCC 60.670 63.158 7.08 0.00 0.00 4.79
4324 5446 0.609131 AAGCTAAGCAATGCCACGGT 60.609 50.000 0.00 0.00 0.00 4.83
4330 5452 2.128771 AGCAATGCCACGGTAGAATT 57.871 45.000 0.00 0.00 0.00 2.17
4335 5457 1.378531 TGCCACGGTAGAATTGATGC 58.621 50.000 0.00 0.00 0.00 3.91
4348 5470 9.507329 GGTAGAATTGATGCATTAATTAGGAGA 57.493 33.333 24.54 9.46 0.00 3.71
4351 5473 9.064706 AGAATTGATGCATTAATTAGGAGAGTG 57.935 33.333 24.54 0.00 0.00 3.51
4352 5474 8.757982 AATTGATGCATTAATTAGGAGAGTGT 57.242 30.769 23.59 0.61 0.00 3.55
4353 5475 9.851686 AATTGATGCATTAATTAGGAGAGTGTA 57.148 29.630 23.59 0.00 0.00 2.90
4354 5476 9.851686 ATTGATGCATTAATTAGGAGAGTGTAA 57.148 29.630 10.72 0.00 0.00 2.41
4356 5478 9.851686 TGATGCATTAATTAGGAGAGTGTAATT 57.148 29.630 0.00 0.00 34.13 1.40
4589 5711 2.425124 CGTGCCACGAAACTTGCG 60.425 61.111 12.85 0.00 46.05 4.85
4815 5977 2.083774 TGATGTTGCCGGTGAGAAATC 58.916 47.619 1.90 0.18 0.00 2.17
4906 6072 8.817092 TCTTCCCGGATAGAATATTTGTTTTT 57.183 30.769 0.73 0.00 0.00 1.94
5064 6230 4.873827 ACGTAATTATGCAAGAACCACGAT 59.126 37.500 18.72 7.46 0.00 3.73
5072 6238 3.625764 TGCAAGAACCACGATAATTAGCC 59.374 43.478 0.00 0.00 0.00 3.93
5073 6239 3.877508 GCAAGAACCACGATAATTAGCCT 59.122 43.478 0.00 0.00 0.00 4.58
5074 6240 5.054477 GCAAGAACCACGATAATTAGCCTA 58.946 41.667 0.00 0.00 0.00 3.93
5075 6241 5.050295 GCAAGAACCACGATAATTAGCCTAC 60.050 44.000 0.00 0.00 0.00 3.18
5076 6242 6.281405 CAAGAACCACGATAATTAGCCTACT 58.719 40.000 0.00 0.00 0.00 2.57
5077 6243 6.481434 AGAACCACGATAATTAGCCTACTT 57.519 37.500 0.00 0.00 0.00 2.24
5078 6244 6.885922 AGAACCACGATAATTAGCCTACTTT 58.114 36.000 0.00 0.00 0.00 2.66
5079 6245 8.015185 AGAACCACGATAATTAGCCTACTTTA 57.985 34.615 0.00 0.00 0.00 1.85
5080 6246 8.142551 AGAACCACGATAATTAGCCTACTTTAG 58.857 37.037 0.00 0.00 0.00 1.85
5081 6247 7.357429 ACCACGATAATTAGCCTACTTTAGT 57.643 36.000 0.00 0.00 0.00 2.24
5082 6248 7.208080 ACCACGATAATTAGCCTACTTTAGTG 58.792 38.462 0.00 0.00 0.00 2.74
5083 6249 7.069085 ACCACGATAATTAGCCTACTTTAGTGA 59.931 37.037 0.00 0.00 0.00 3.41
5084 6250 8.088981 CCACGATAATTAGCCTACTTTAGTGAT 58.911 37.037 0.00 0.00 0.00 3.06
5085 6251 9.130312 CACGATAATTAGCCTACTTTAGTGATC 57.870 37.037 0.00 0.00 0.00 2.92
5086 6252 9.080097 ACGATAATTAGCCTACTTTAGTGATCT 57.920 33.333 0.00 0.00 0.00 2.75
5087 6253 9.915629 CGATAATTAGCCTACTTTAGTGATCTT 57.084 33.333 0.00 0.00 0.00 2.40
5091 6257 9.771534 AATTAGCCTACTTTAGTGATCTTGATC 57.228 33.333 3.82 3.82 0.00 2.92
5092 6258 8.540507 TTAGCCTACTTTAGTGATCTTGATCT 57.459 34.615 11.31 0.00 0.00 2.75
5093 6259 9.642343 TTAGCCTACTTTAGTGATCTTGATCTA 57.358 33.333 11.31 0.00 0.00 1.98
5094 6260 8.540507 AGCCTACTTTAGTGATCTTGATCTAA 57.459 34.615 11.31 1.42 0.00 2.10
5095 6261 8.982723 AGCCTACTTTAGTGATCTTGATCTAAA 58.017 33.333 11.31 7.99 33.36 1.85
5096 6262 9.771534 GCCTACTTTAGTGATCTTGATCTAAAT 57.228 33.333 11.31 0.00 33.76 1.40
5174 6340 8.978564 AGCATATCTGATTAATTACGTCTGAG 57.021 34.615 0.00 0.00 0.00 3.35
5227 6393 2.574824 GGTCTGTAACAAGTGGGGGTAT 59.425 50.000 0.00 0.00 0.00 2.73
5228 6394 3.009805 GGTCTGTAACAAGTGGGGGTATT 59.990 47.826 0.00 0.00 0.00 1.89
5299 6465 5.471456 AGATGCTTGTTTTAGACAGTGGAAG 59.529 40.000 0.00 0.00 39.94 3.46
5300 6466 4.523083 TGCTTGTTTTAGACAGTGGAAGT 58.477 39.130 0.00 0.00 39.94 3.01
5302 6468 5.065988 TGCTTGTTTTAGACAGTGGAAGTTC 59.934 40.000 0.00 0.00 39.94 3.01
5303 6469 5.297029 GCTTGTTTTAGACAGTGGAAGTTCT 59.703 40.000 2.25 0.00 39.94 3.01
5304 6470 6.482308 GCTTGTTTTAGACAGTGGAAGTTCTA 59.518 38.462 2.25 0.00 39.94 2.10
5305 6471 7.518529 GCTTGTTTTAGACAGTGGAAGTTCTAC 60.519 40.741 11.19 11.19 39.94 2.59
5306 6472 7.120923 TGTTTTAGACAGTGGAAGTTCTACT 57.879 36.000 15.56 15.56 38.84 2.57
5307 6473 8.241497 TGTTTTAGACAGTGGAAGTTCTACTA 57.759 34.615 20.13 3.73 35.96 1.82
5308 6474 8.698210 TGTTTTAGACAGTGGAAGTTCTACTAA 58.302 33.333 20.13 9.42 35.96 2.24
5309 6475 8.976471 GTTTTAGACAGTGGAAGTTCTACTAAC 58.024 37.037 20.13 15.49 35.96 2.34
5310 6476 8.474710 TTTAGACAGTGGAAGTTCTACTAACT 57.525 34.615 20.13 20.97 35.96 2.24
5311 6477 9.578576 TTTAGACAGTGGAAGTTCTACTAACTA 57.421 33.333 20.13 20.15 35.96 2.24
5312 6478 7.451501 AGACAGTGGAAGTTCTACTAACTAC 57.548 40.000 20.13 10.57 35.96 2.73
5315 6568 8.334263 ACAGTGGAAGTTCTACTAACTACTAC 57.666 38.462 20.13 0.00 35.96 2.73
5320 6573 8.046107 TGGAAGTTCTACTAACTACTACTCTCC 58.954 40.741 2.25 0.00 0.00 3.71
5342 6595 7.458170 TCTCCTAGGAAAAGGTAGAACAGAAAT 59.542 37.037 13.77 0.00 37.91 2.17
5375 6628 2.096980 CATGGAATGCACAGTACAGCTG 59.903 50.000 13.48 13.48 44.02 4.24
5393 6648 6.817184 ACAGCTGTATATACTGAACGGAAAT 58.183 36.000 20.16 0.00 35.38 2.17
5394 6649 6.924060 ACAGCTGTATATACTGAACGGAAATC 59.076 38.462 20.16 3.04 35.38 2.17
5395 6650 6.923508 CAGCTGTATATACTGAACGGAAATCA 59.076 38.462 20.42 0.00 33.10 2.57
5397 6652 6.128795 GCTGTATATACTGAACGGAAATCAGC 60.129 42.308 20.42 9.78 46.56 4.26
5398 6653 6.220930 TGTATATACTGAACGGAAATCAGCC 58.779 40.000 13.89 0.00 46.56 4.85
5399 6654 3.914426 ATACTGAACGGAAATCAGCCT 57.086 42.857 3.57 0.00 46.56 4.58
5400 6655 1.813513 ACTGAACGGAAATCAGCCTG 58.186 50.000 3.57 0.00 46.56 4.85
5401 6656 0.449388 CTGAACGGAAATCAGCCTGC 59.551 55.000 0.00 0.00 38.03 4.85
5402 6657 0.250684 TGAACGGAAATCAGCCTGCA 60.251 50.000 0.00 0.00 0.00 4.41
5581 6842 0.902531 TCCTCTTCATCGTTGGGGTC 59.097 55.000 0.00 0.00 0.00 4.46
5613 6874 1.425412 GCGTACAAGGTACACACTGG 58.575 55.000 7.25 0.00 0.00 4.00
5787 7048 1.869767 CTTCGTGCACTGAAGCTCTTT 59.130 47.619 26.61 0.00 36.72 2.52
5839 7104 2.115343 GGATTGTTCCTGGACTGGAC 57.885 55.000 0.00 0.00 39.14 4.02
5840 7105 1.676014 GGATTGTTCCTGGACTGGACG 60.676 57.143 0.00 0.00 39.14 4.79
5842 7107 0.391597 TTGTTCCTGGACTGGACGAC 59.608 55.000 0.00 0.00 35.58 4.34
5843 7108 1.080705 GTTCCTGGACTGGACGACG 60.081 63.158 0.00 0.00 35.58 5.12
5844 7109 2.273179 TTCCTGGACTGGACGACGG 61.273 63.158 0.00 0.00 35.58 4.79
5846 7111 1.676635 CCTGGACTGGACGACGGTA 60.677 63.158 0.00 0.00 39.29 4.02
5847 7112 1.246056 CCTGGACTGGACGACGGTAA 61.246 60.000 0.00 0.00 39.29 2.85
5848 7113 0.109412 CTGGACTGGACGACGGTAAC 60.109 60.000 0.00 0.00 39.29 2.50
5849 7114 0.822944 TGGACTGGACGACGGTAACA 60.823 55.000 0.00 0.00 39.29 2.41
5850 7115 0.109412 GGACTGGACGACGGTAACAG 60.109 60.000 0.00 4.41 39.29 3.16
5851 7116 0.595095 GACTGGACGACGGTAACAGT 59.405 55.000 13.26 13.26 43.22 3.55
5852 7117 0.595095 ACTGGACGACGGTAACAGTC 59.405 55.000 0.00 0.00 39.07 3.51
6025 7291 8.340618 ACTACATTATTCTGCATCAACAGTTT 57.659 30.769 0.00 0.00 38.84 2.66
6039 7305 5.587289 TCAACAGTTTCAACTAAATGTGGC 58.413 37.500 0.00 0.00 37.08 5.01
6048 7314 4.455533 TCAACTAAATGTGGCATGACTGAC 59.544 41.667 0.00 0.00 0.00 3.51
6089 7355 2.314323 TGCAGAGAATCGCAATAGCA 57.686 45.000 0.00 0.00 40.50 3.49
6107 7373 7.350467 CAATAGCATATCTTGTTACAGCACTG 58.650 38.462 0.00 0.00 0.00 3.66
6204 7470 8.293699 ACTGTGAGTTCAAACCTTTAAGAATT 57.706 30.769 0.00 0.00 0.00 2.17
6275 7544 4.818534 TGAGCAAGATGTGTTTCTGAAC 57.181 40.909 0.00 0.00 36.29 3.18
6364 7633 4.539726 TGTATGGTACCTACGTTCCTGAT 58.460 43.478 14.36 0.00 30.93 2.90
6374 7643 4.831155 CCTACGTTCCTGATTGGGAGTATA 59.169 45.833 0.00 0.00 36.66 1.47
6375 7644 5.480772 CCTACGTTCCTGATTGGGAGTATAT 59.519 44.000 0.00 0.00 36.66 0.86
6430 7699 5.607939 TCTCTGTAAGTTCCACTTTCACA 57.392 39.130 0.00 0.00 39.51 3.58
6432 7701 5.991606 TCTCTGTAAGTTCCACTTTCACATG 59.008 40.000 0.00 0.00 39.51 3.21
6477 7747 9.874195 ATATCTAGCAGTATTATAGATGGCAGA 57.126 33.333 0.00 0.00 36.99 4.26
6497 7804 5.924825 GCAGAAACTGATGAGCTTCAAAATT 59.075 36.000 2.81 0.00 32.44 1.82
6757 8064 2.914289 CCACTCCCTCCTGATGCC 59.086 66.667 0.00 0.00 0.00 4.40
6826 8133 6.349694 GGTCAGAAAAACTCATGATTCCTTCC 60.350 42.308 0.00 0.00 0.00 3.46
6827 8134 6.207417 GTCAGAAAAACTCATGATTCCTTCCA 59.793 38.462 0.00 0.00 0.00 3.53
6833 8140 6.581171 AACTCATGATTCCTTCCAAGTTTC 57.419 37.500 0.00 0.00 0.00 2.78
6860 8168 4.442375 TCTAGCTGTAACTGAGTTCTGC 57.558 45.455 0.00 9.40 0.00 4.26
6885 8193 5.869344 GCCAAGGGTAAATTCTGATTGTTTC 59.131 40.000 0.00 0.00 0.00 2.78
6886 8194 6.518200 GCCAAGGGTAAATTCTGATTGTTTCA 60.518 38.462 0.00 0.00 0.00 2.69
6942 8250 0.976641 TCACCTGCTTGATCGGTCTT 59.023 50.000 0.00 0.00 0.00 3.01
7071 8379 7.882791 TCTCTATCCTTAATTGCAGAAACACAA 59.117 33.333 0.00 0.00 0.00 3.33
7153 8461 6.749036 ATGGACTTCTTCGGTAAGGATATT 57.251 37.500 0.00 0.00 33.22 1.28
7176 8484 5.680619 TGTCAACAGTTAACACTCCATTCT 58.319 37.500 8.61 0.00 0.00 2.40
7190 8498 3.053077 TCCATTCTTGATTATCCCGGGT 58.947 45.455 22.86 10.79 0.00 5.28
7197 8505 3.671008 TGATTATCCCGGGTAATGACG 57.329 47.619 24.33 0.00 0.00 4.35
7204 8512 0.037139 CCGGGTAATGACGTTGACCA 60.037 55.000 0.00 0.00 33.33 4.02
7209 8523 2.478894 GGTAATGACGTTGACCACACTG 59.521 50.000 0.00 0.00 31.89 3.66
7213 8527 1.772063 GACGTTGACCACACTGTGCC 61.772 60.000 7.90 0.00 31.34 5.01
7222 8536 1.676916 CCACACTGTGCCGATGATCTT 60.677 52.381 7.90 0.00 31.34 2.40
7224 8538 3.261580 CACACTGTGCCGATGATCTTTA 58.738 45.455 7.90 0.00 0.00 1.85
7234 8548 3.185188 CCGATGATCTTTACAGGAATGCG 59.815 47.826 0.00 0.00 0.00 4.73
7403 8717 4.959723 TGATGATATTTGTCCTGATCGCA 58.040 39.130 0.00 0.00 0.00 5.10
7412 8726 1.003116 GTCCTGATCGCATGCAACATC 60.003 52.381 19.57 15.27 0.00 3.06
7469 8783 4.736473 AGCCCAATAACAACCTTGTAAGT 58.264 39.130 0.00 0.00 41.31 2.24
7484 8798 5.010012 CCTTGTAAGTTTTTGCAGATGACCT 59.990 40.000 0.00 0.00 30.44 3.85
7485 8799 5.437289 TGTAAGTTTTTGCAGATGACCTG 57.563 39.130 0.00 0.00 45.67 4.00
7518 8833 6.988580 TCAGTCGAGCTTTCAATGATGATAAT 59.011 34.615 0.00 0.00 34.96 1.28
7519 8834 8.143835 TCAGTCGAGCTTTCAATGATGATAATA 58.856 33.333 0.00 0.00 34.96 0.98
7803 9136 9.143155 TCTGAGTGCTCTATGTATATGGTAAAA 57.857 33.333 0.68 0.00 0.00 1.52
7890 9227 3.496884 TCAGTTCCAAACACGTCTATTGC 59.503 43.478 0.00 0.00 0.00 3.56
7891 9228 3.249799 CAGTTCCAAACACGTCTATTGCA 59.750 43.478 0.00 0.00 0.00 4.08
7892 9229 4.072131 AGTTCCAAACACGTCTATTGCAT 58.928 39.130 0.00 0.00 0.00 3.96
7893 9230 4.518970 AGTTCCAAACACGTCTATTGCATT 59.481 37.500 0.00 0.00 0.00 3.56
7894 9231 5.009610 AGTTCCAAACACGTCTATTGCATTT 59.990 36.000 0.00 0.00 0.00 2.32
7895 9232 4.793071 TCCAAACACGTCTATTGCATTTG 58.207 39.130 0.00 0.00 0.00 2.32
7896 9233 3.364621 CCAAACACGTCTATTGCATTTGC 59.635 43.478 0.00 0.00 42.50 3.68
7969 9306 3.923273 TCATAATCCTAGGAGCCTGGA 57.077 47.619 18.34 8.10 0.00 3.86
8044 9404 3.335579 CAGGTAAGAGCCCTGTTTGTAC 58.664 50.000 0.00 0.00 43.73 2.90
8197 9568 9.429359 CTAACTGAACACTCTAAACATTCAGAT 57.571 33.333 16.82 9.16 45.96 2.90
8269 9641 6.016610 TGCTAAACAAGACCATTCTAAACACC 60.017 38.462 0.00 0.00 0.00 4.16
8358 9731 6.043590 AGGAATTTCTTTTTCTTGCCAAGGAT 59.956 34.615 4.30 0.00 0.00 3.24
8465 9839 1.047801 ACATGGCCAAGACCCAAAAC 58.952 50.000 16.33 0.00 35.67 2.43
8485 9859 9.374838 CCAAAACTATACGAAATACTACAAGGT 57.625 33.333 0.00 0.00 0.00 3.50
8524 9903 3.313012 AAGTACATAGTCAGCAACGCA 57.687 42.857 0.00 0.00 0.00 5.24
8768 13656 3.645884 TGTTAGTGTTCGCTACTCCAAC 58.354 45.455 0.00 0.00 0.00 3.77
8769 13657 3.068448 TGTTAGTGTTCGCTACTCCAACA 59.932 43.478 0.00 0.00 0.00 3.33
8770 13658 2.902705 AGTGTTCGCTACTCCAACAA 57.097 45.000 0.00 0.00 31.95 2.83
8771 13659 2.480845 AGTGTTCGCTACTCCAACAAC 58.519 47.619 0.00 0.00 31.95 3.32
8772 13660 2.159014 AGTGTTCGCTACTCCAACAACA 60.159 45.455 0.00 0.00 31.95 3.33
8773 13661 2.610374 GTGTTCGCTACTCCAACAACAA 59.390 45.455 0.00 0.00 31.95 2.83
8774 13662 2.610374 TGTTCGCTACTCCAACAACAAC 59.390 45.455 0.00 0.00 0.00 3.32
8775 13663 2.605837 TCGCTACTCCAACAACAACA 57.394 45.000 0.00 0.00 0.00 3.33
8776 13664 2.907634 TCGCTACTCCAACAACAACAA 58.092 42.857 0.00 0.00 0.00 2.83
8777 13665 3.472652 TCGCTACTCCAACAACAACAAT 58.527 40.909 0.00 0.00 0.00 2.71
8778 13666 4.633175 TCGCTACTCCAACAACAACAATA 58.367 39.130 0.00 0.00 0.00 1.90
8779 13667 5.057819 TCGCTACTCCAACAACAACAATAA 58.942 37.500 0.00 0.00 0.00 1.40
8780 13668 5.049954 TCGCTACTCCAACAACAACAATAAC 60.050 40.000 0.00 0.00 0.00 1.89
8781 13669 5.277586 CGCTACTCCAACAACAACAATAACA 60.278 40.000 0.00 0.00 0.00 2.41
8782 13670 6.500041 GCTACTCCAACAACAACAATAACAA 58.500 36.000 0.00 0.00 0.00 2.83
8783 13671 6.416750 GCTACTCCAACAACAACAATAACAAC 59.583 38.462 0.00 0.00 0.00 3.32
8784 13672 6.274157 ACTCCAACAACAACAATAACAACA 57.726 33.333 0.00 0.00 0.00 3.33
8785 13673 6.692486 ACTCCAACAACAACAATAACAACAA 58.308 32.000 0.00 0.00 0.00 2.83
8786 13674 6.588373 ACTCCAACAACAACAATAACAACAAC 59.412 34.615 0.00 0.00 0.00 3.32
8787 13675 6.455647 TCCAACAACAACAATAACAACAACA 58.544 32.000 0.00 0.00 0.00 3.33
8788 13676 6.929049 TCCAACAACAACAATAACAACAACAA 59.071 30.769 0.00 0.00 0.00 2.83
8789 13677 7.441157 TCCAACAACAACAATAACAACAACAAA 59.559 29.630 0.00 0.00 0.00 2.83
8790 13678 7.743838 CCAACAACAACAATAACAACAACAAAG 59.256 33.333 0.00 0.00 0.00 2.77
8791 13679 6.826612 ACAACAACAATAACAACAACAAAGC 58.173 32.000 0.00 0.00 0.00 3.51
8792 13680 6.128418 ACAACAACAATAACAACAACAAAGCC 60.128 34.615 0.00 0.00 0.00 4.35
8793 13681 5.729510 ACAACAATAACAACAACAAAGCCT 58.270 33.333 0.00 0.00 0.00 4.58
8794 13682 6.169800 ACAACAATAACAACAACAAAGCCTT 58.830 32.000 0.00 0.00 0.00 4.35
8795 13683 6.652900 ACAACAATAACAACAACAAAGCCTTT 59.347 30.769 0.00 0.00 0.00 3.11
8796 13684 7.819900 ACAACAATAACAACAACAAAGCCTTTA 59.180 29.630 0.00 0.00 0.00 1.85
8797 13685 8.327429 CAACAATAACAACAACAAAGCCTTTAG 58.673 33.333 0.00 0.00 0.00 1.85
8798 13686 7.552459 ACAATAACAACAACAAAGCCTTTAGT 58.448 30.769 0.00 0.00 0.00 2.24
8799 13687 7.704899 ACAATAACAACAACAAAGCCTTTAGTC 59.295 33.333 0.00 0.00 0.00 2.59
8800 13688 4.649088 ACAACAACAAAGCCTTTAGTCC 57.351 40.909 0.00 0.00 0.00 3.85
8801 13689 3.383505 ACAACAACAAAGCCTTTAGTCCC 59.616 43.478 0.00 0.00 0.00 4.46
8802 13690 3.306472 ACAACAAAGCCTTTAGTCCCA 57.694 42.857 0.00 0.00 0.00 4.37
8803 13691 3.637769 ACAACAAAGCCTTTAGTCCCAA 58.362 40.909 0.00 0.00 0.00 4.12
8804 13692 4.027437 ACAACAAAGCCTTTAGTCCCAAA 58.973 39.130 0.00 0.00 0.00 3.28
8805 13693 4.142026 ACAACAAAGCCTTTAGTCCCAAAC 60.142 41.667 0.00 0.00 0.00 2.93
8806 13694 3.637769 ACAAAGCCTTTAGTCCCAAACA 58.362 40.909 0.00 0.00 0.00 2.83
8807 13695 4.027437 ACAAAGCCTTTAGTCCCAAACAA 58.973 39.130 0.00 0.00 0.00 2.83
8808 13696 4.099419 ACAAAGCCTTTAGTCCCAAACAAG 59.901 41.667 0.00 0.00 0.00 3.16
8809 13697 3.595190 AGCCTTTAGTCCCAAACAAGT 57.405 42.857 0.00 0.00 0.00 3.16
8810 13698 3.910989 AGCCTTTAGTCCCAAACAAGTT 58.089 40.909 0.00 0.00 0.00 2.66
8811 13699 3.636764 AGCCTTTAGTCCCAAACAAGTTG 59.363 43.478 0.00 0.00 36.94 3.16
8820 13708 1.995376 CAAACAAGTTGGGGTAGGCT 58.005 50.000 7.96 0.00 33.18 4.58
8821 13709 3.149005 CAAACAAGTTGGGGTAGGCTA 57.851 47.619 7.96 0.00 33.18 3.93
8822 13710 3.081804 CAAACAAGTTGGGGTAGGCTAG 58.918 50.000 7.96 0.00 33.18 3.42
8823 13711 2.337359 ACAAGTTGGGGTAGGCTAGA 57.663 50.000 7.96 0.00 0.00 2.43
8824 13712 2.188817 ACAAGTTGGGGTAGGCTAGAG 58.811 52.381 7.96 0.00 0.00 2.43
8825 13713 1.486726 CAAGTTGGGGTAGGCTAGAGG 59.513 57.143 0.00 0.00 0.00 3.69
8826 13714 0.717196 AGTTGGGGTAGGCTAGAGGT 59.283 55.000 0.00 0.00 0.00 3.85
8827 13715 0.831307 GTTGGGGTAGGCTAGAGGTG 59.169 60.000 0.00 0.00 0.00 4.00
8828 13716 0.714180 TTGGGGTAGGCTAGAGGTGA 59.286 55.000 0.00 0.00 0.00 4.02
8829 13717 0.714180 TGGGGTAGGCTAGAGGTGAA 59.286 55.000 0.00 0.00 0.00 3.18
8830 13718 1.079825 TGGGGTAGGCTAGAGGTGAAA 59.920 52.381 0.00 0.00 0.00 2.69
8831 13719 1.485480 GGGGTAGGCTAGAGGTGAAAC 59.515 57.143 0.00 0.00 0.00 2.78
8846 13734 3.531538 GTGAAACCCATAAGATCTCGCA 58.468 45.455 0.00 0.00 0.00 5.10
8847 13735 3.938963 GTGAAACCCATAAGATCTCGCAA 59.061 43.478 0.00 0.00 0.00 4.85
8848 13736 3.938963 TGAAACCCATAAGATCTCGCAAC 59.061 43.478 0.00 0.00 0.00 4.17
8849 13737 2.622064 ACCCATAAGATCTCGCAACC 57.378 50.000 0.00 0.00 0.00 3.77
8850 13738 1.837439 ACCCATAAGATCTCGCAACCA 59.163 47.619 0.00 0.00 0.00 3.67
8851 13739 2.238646 ACCCATAAGATCTCGCAACCAA 59.761 45.455 0.00 0.00 0.00 3.67
8852 13740 2.614057 CCCATAAGATCTCGCAACCAAC 59.386 50.000 0.00 0.00 0.00 3.77
8853 13741 3.535561 CCATAAGATCTCGCAACCAACT 58.464 45.455 0.00 0.00 0.00 3.16
8854 13742 3.557595 CCATAAGATCTCGCAACCAACTC 59.442 47.826 0.00 0.00 0.00 3.01
8855 13743 2.839486 AAGATCTCGCAACCAACTCA 57.161 45.000 0.00 0.00 0.00 3.41
8856 13744 3.340814 AAGATCTCGCAACCAACTCAT 57.659 42.857 0.00 0.00 0.00 2.90
8857 13745 2.625737 AGATCTCGCAACCAACTCATG 58.374 47.619 0.00 0.00 0.00 3.07
8865 13753 3.915575 CCAACTCATGGCTCTGGC 58.084 61.111 0.00 0.00 43.80 4.85
8866 13754 1.001764 CCAACTCATGGCTCTGGCA 60.002 57.895 0.00 0.00 43.80 4.92
8867 13755 1.310933 CCAACTCATGGCTCTGGCAC 61.311 60.000 0.00 0.00 43.80 5.01
8868 13756 0.607217 CAACTCATGGCTCTGGCACA 60.607 55.000 0.00 0.00 41.84 4.57
8869 13757 0.330604 AACTCATGGCTCTGGCACAT 59.669 50.000 0.00 0.00 41.84 3.21
8870 13758 0.393944 ACTCATGGCTCTGGCACATG 60.394 55.000 8.97 8.97 41.84 3.21
8871 13759 1.077285 TCATGGCTCTGGCACATGG 60.077 57.895 13.76 0.00 41.84 3.66
8872 13760 1.077285 CATGGCTCTGGCACATGGA 60.077 57.895 7.68 0.00 41.84 3.41
8873 13761 0.467474 CATGGCTCTGGCACATGGAT 60.467 55.000 7.68 0.00 41.84 3.41
8874 13762 1.142936 ATGGCTCTGGCACATGGATA 58.857 50.000 0.00 0.00 41.84 2.59
8875 13763 0.471191 TGGCTCTGGCACATGGATAG 59.529 55.000 0.00 0.00 38.20 2.08
8876 13764 0.888285 GGCTCTGGCACATGGATAGC 60.888 60.000 0.00 0.00 38.20 2.97
8877 13765 0.179037 GCTCTGGCACATGGATAGCA 60.179 55.000 0.00 0.00 38.20 3.49
8878 13766 1.748244 GCTCTGGCACATGGATAGCAA 60.748 52.381 0.00 0.00 38.20 3.91
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
33 34 0.033109 GCCCCTTCATACCTGCCTTT 60.033 55.000 0.00 0.00 0.00 3.11
389 680 1.074872 GCATTTGCTTTGAGGCTCGC 61.075 55.000 10.42 7.97 38.21 5.03
405 696 3.055719 CCCGCTCGTTGTTGGCAT 61.056 61.111 0.00 0.00 0.00 4.40
412 703 2.255252 CCTTTTGCCCGCTCGTTG 59.745 61.111 0.00 0.00 0.00 4.10
444 735 5.461327 ACGGAATAATAGGTGGAGAGGTTA 58.539 41.667 0.00 0.00 0.00 2.85
447 738 4.262506 GGAACGGAATAATAGGTGGAGAGG 60.263 50.000 0.00 0.00 0.00 3.69
610 946 6.959639 TGGATTCTTATTATTGTGGAAGGC 57.040 37.500 0.00 0.00 0.00 4.35
617 953 8.534496 AGCTTTGCTTTGGATTCTTATTATTGT 58.466 29.630 0.00 0.00 33.89 2.71
643 979 4.380531 GTGTTTGTGGATGAGAAGAGACA 58.619 43.478 0.00 0.00 0.00 3.41
649 985 4.009675 GCTATGGTGTTTGTGGATGAGAA 58.990 43.478 0.00 0.00 0.00 2.87
673 1009 2.510238 GGAGTACAGCGCTGCCAG 60.510 66.667 36.28 14.49 0.00 4.85
720 1059 2.045926 CTCAAAGCAGGGTCCGGG 60.046 66.667 0.00 0.00 0.00 5.73
721 1060 1.078848 CTCTCAAAGCAGGGTCCGG 60.079 63.158 0.00 0.00 0.00 5.14
725 1064 0.178891 TCCCTCTCTCAAAGCAGGGT 60.179 55.000 2.78 0.00 40.57 4.34
735 1074 2.427812 CCGTTAAAGGACTCCCTCTCTC 59.572 54.545 0.40 0.00 43.48 3.20
736 1075 2.458620 CCGTTAAAGGACTCCCTCTCT 58.541 52.381 0.40 0.00 43.48 3.10
744 1083 0.250597 GGTGTGGCCGTTAAAGGACT 60.251 55.000 14.79 0.00 40.90 3.85
745 1084 0.535553 TGGTGTGGCCGTTAAAGGAC 60.536 55.000 12.01 9.23 41.21 3.85
1074 1422 0.394938 TGGTCGGTTATGTGTGTGCT 59.605 50.000 0.00 0.00 0.00 4.40
1076 1424 1.193650 CGTTGGTCGGTTATGTGTGTG 59.806 52.381 0.00 0.00 35.71 3.82
1088 1443 0.734253 CTCTCTGGCTTCGTTGGTCG 60.734 60.000 0.00 0.00 41.41 4.79
1112 1467 2.468868 TTGGCCTGGCTTCCTTGGA 61.469 57.895 19.68 0.00 0.00 3.53
1113 1468 2.118076 TTGGCCTGGCTTCCTTGG 59.882 61.111 19.68 0.00 0.00 3.61
1114 1469 2.629656 CGTTGGCCTGGCTTCCTTG 61.630 63.158 19.68 0.25 0.00 3.61
1137 1492 0.878961 TCGCGCGTGCTATCTCTCTA 60.879 55.000 30.98 1.54 39.65 2.43
1169 1533 1.145377 ACAACCAACTCGCCTTCGT 59.855 52.632 0.00 0.00 36.96 3.85
1171 1535 1.282875 GCACAACCAACTCGCCTTC 59.717 57.895 0.00 0.00 0.00 3.46
1240 1606 1.782028 AACAGCGGAACAGGCGAAAC 61.782 55.000 0.00 0.00 35.00 2.78
1480 1850 1.895020 CGGTGATTCCCCGGAAGACA 61.895 60.000 0.73 2.71 41.78 3.41
1523 1896 3.277142 AGACGAATTAAAAGCGGGGAT 57.723 42.857 0.00 0.00 0.00 3.85
1534 1910 4.112716 TGTGATGCCGTAAGACGAATTA 57.887 40.909 0.00 0.00 46.05 1.40
1536 1912 2.665649 TGTGATGCCGTAAGACGAAT 57.334 45.000 0.00 0.00 46.05 3.34
1542 1918 3.243877 CGAGAAAGATGTGATGCCGTAAG 59.756 47.826 0.00 0.00 0.00 2.34
1549 1926 1.645034 ACGGCGAGAAAGATGTGATG 58.355 50.000 16.62 0.00 0.00 3.07
1555 1932 1.464997 GCAAAGAACGGCGAGAAAGAT 59.535 47.619 16.62 0.00 0.00 2.40
1591 1968 4.338118 GGGAAGCAATTCGATTTGGTATCA 59.662 41.667 21.06 0.00 36.36 2.15
1679 2061 3.064545 GCAGTGGCACTAAGAATGATGTC 59.935 47.826 21.59 0.00 40.72 3.06
1687 2069 1.003355 GCTGGCAGTGGCACTAAGA 60.003 57.895 21.59 5.67 43.71 2.10
1691 2073 3.736996 TTTGGCTGGCAGTGGCACT 62.737 57.895 15.88 15.88 43.71 4.40
1711 2093 5.590663 GCATCATGATTCATGGAGCATCTAT 59.409 40.000 25.63 11.22 41.66 1.98
1768 2154 3.865164 GTGCAGACAAAAAGGGAAAAGTG 59.135 43.478 0.00 0.00 0.00 3.16
1769 2155 3.769300 AGTGCAGACAAAAAGGGAAAAGT 59.231 39.130 0.00 0.00 0.00 2.66
1770 2156 4.391405 AGTGCAGACAAAAAGGGAAAAG 57.609 40.909 0.00 0.00 0.00 2.27
1771 2157 4.817318 AAGTGCAGACAAAAAGGGAAAA 57.183 36.364 0.00 0.00 0.00 2.29
1772 2158 5.923733 TTAAGTGCAGACAAAAAGGGAAA 57.076 34.783 0.00 0.00 0.00 3.13
1795 2181 9.978336 ATCTTTTGGTTACTCTACTAGTCTAGT 57.022 33.333 16.65 16.65 39.80 2.57
1798 2184 8.905850 GCTATCTTTTGGTTACTCTACTAGTCT 58.094 37.037 0.00 0.00 39.80 3.24
1799 2185 8.684520 TGCTATCTTTTGGTTACTCTACTAGTC 58.315 37.037 0.00 0.00 39.80 2.59
1821 2207 4.072131 GGTTGGTTGAATCAACTCTGCTA 58.928 43.478 23.30 3.57 43.14 3.49
1835 2221 4.326826 AGTAGTGATCATGTGGTTGGTTG 58.673 43.478 0.00 0.00 0.00 3.77
1856 2242 5.355350 CCCTGAAGCAAAAATCCTGTACTAG 59.645 44.000 0.00 0.00 0.00 2.57
1864 2250 4.541973 ATGTTCCCTGAAGCAAAAATCC 57.458 40.909 0.00 0.00 0.00 3.01
1871 2257 2.040278 AGCAGTAATGTTCCCTGAAGCA 59.960 45.455 0.00 0.00 0.00 3.91
1908 2309 5.336531 CCTGACTATAACTCGGACAACTTGT 60.337 44.000 0.00 0.00 0.00 3.16
1918 2319 3.492383 CAGCAATGCCTGACTATAACTCG 59.508 47.826 0.00 0.00 34.77 4.18
1947 2348 1.620819 AGGAGCTAGGCAATCATACGG 59.379 52.381 0.00 0.00 0.00 4.02
1970 2373 0.984230 TTGAAGAAGATCCGCCCAGT 59.016 50.000 0.00 0.00 0.00 4.00
1979 2382 2.676463 GCAGTCGGAGCTTGAAGAAGAT 60.676 50.000 0.00 0.00 0.00 2.40
2002 2411 5.105554 AGCAGAGACTGTAGTAGGAAACATG 60.106 44.000 0.00 0.00 33.43 3.21
2018 2427 3.551846 AGGTAGAGCTTAGAGCAGAGAC 58.448 50.000 2.47 0.00 45.56 3.36
2019 2428 3.458118 AGAGGTAGAGCTTAGAGCAGAGA 59.542 47.826 2.47 0.00 45.56 3.10
2025 2434 7.120726 GGCTATCTTTAGAGGTAGAGCTTAGAG 59.879 44.444 4.76 0.00 38.64 2.43
2026 2435 6.943718 GGCTATCTTTAGAGGTAGAGCTTAGA 59.056 42.308 4.76 0.00 38.64 2.10
2027 2436 6.717540 TGGCTATCTTTAGAGGTAGAGCTTAG 59.282 42.308 4.76 0.00 38.64 2.18
2028 2437 6.611785 TGGCTATCTTTAGAGGTAGAGCTTA 58.388 40.000 4.76 0.00 38.64 3.09
2029 2438 5.459505 TGGCTATCTTTAGAGGTAGAGCTT 58.540 41.667 4.76 0.00 38.64 3.74
2030 2439 5.068215 TGGCTATCTTTAGAGGTAGAGCT 57.932 43.478 4.76 0.00 38.64 4.09
2066 2475 2.869801 ACGTGTTGTGTTGTCACCATAG 59.130 45.455 0.00 0.00 43.26 2.23
2134 2543 5.586243 TCAGTTGTAAAGAAGCATATCAGGC 59.414 40.000 0.00 0.00 0.00 4.85
2178 2587 9.134734 GTGATCGGATTAACTCTTCATTATCTC 57.865 37.037 0.00 0.00 0.00 2.75
2279 2688 1.693083 CGTACGCTTGCAAGTAGGGC 61.693 60.000 26.55 12.59 0.00 5.19
2285 2694 2.095969 TGAAATTCCGTACGCTTGCAAG 60.096 45.455 22.44 22.44 0.00 4.01
2302 2711 0.467290 GGGTCCAACAGCTGGTGAAA 60.467 55.000 33.30 17.57 46.51 2.69
2348 2757 8.319881 CAGCTACACAGGGTATATACTACTAGA 58.680 40.741 12.54 0.00 0.00 2.43
2349 2761 8.102047 ACAGCTACACAGGGTATATACTACTAG 58.898 40.741 12.54 9.40 0.00 2.57
2370 2782 7.372312 ATTCAGGTACGGAAGCAATACAGCT 62.372 44.000 5.10 0.00 46.90 4.24
2416 2828 5.012561 AGCTAGAGTTGACATTCTTTCCACT 59.987 40.000 0.00 0.00 0.00 4.00
2538 2951 0.389817 GGTGTCGTGTCAGCTGCATA 60.390 55.000 9.47 0.85 33.69 3.14
2557 2970 9.982651 TTTCGAGGGATCTACTATTAGAAATTG 57.017 33.333 0.00 0.00 37.88 2.32
2595 3008 5.330233 TCACCAGTTCCACATCTCTACTAA 58.670 41.667 0.00 0.00 0.00 2.24
2608 3026 1.305201 TGCTCGTTTTCACCAGTTCC 58.695 50.000 0.00 0.00 0.00 3.62
2621 3039 3.640000 GCGCACTGTGTTGCTCGT 61.640 61.111 16.38 0.00 40.62 4.18
2663 3081 4.480031 GACTCCTTCGTCGCCTTC 57.520 61.111 0.00 0.00 0.00 3.46
2704 3122 5.120674 TGAACTGTGCTATTCATCTTGTTCG 59.879 40.000 0.00 0.00 35.46 3.95
2728 3146 8.216423 ACTGTAGATATGCATCTCTCCAAAAAT 58.784 33.333 17.09 0.00 40.81 1.82
2733 3151 5.010415 CACACTGTAGATATGCATCTCTCCA 59.990 44.000 17.09 11.76 40.81 3.86
2759 3177 5.852827 TCAAAAGGCTAAAAAGGTGGATTG 58.147 37.500 0.00 0.00 0.00 2.67
2760 3178 6.493189 TTCAAAAGGCTAAAAAGGTGGATT 57.507 33.333 0.00 0.00 0.00 3.01
2818 3236 6.756542 AGTTGCAAATTTCTGAAGTGGTTTAC 59.243 34.615 0.00 0.00 0.00 2.01
2826 3244 7.486802 AAATGGAAGTTGCAAATTTCTGAAG 57.513 32.000 18.09 0.00 41.66 3.02
2867 3285 5.279685 AGCCCCAATCCATCTTTAAATTGA 58.720 37.500 0.00 0.00 32.14 2.57
2896 3314 6.371595 AAAGTCCACTGAGATTGAGATTCT 57.628 37.500 0.00 0.00 0.00 2.40
2897 3315 8.037758 TCTAAAAGTCCACTGAGATTGAGATTC 58.962 37.037 0.00 0.00 0.00 2.52
3138 3588 1.803922 CAACAGCCGACGACGCATA 60.804 57.895 0.64 0.00 38.29 3.14
3159 3609 2.031616 TCGACTCGACGTGGAGGT 59.968 61.111 27.98 15.48 38.39 3.85
3243 3693 1.001406 GGGTGATCGATGGACAGATCC 59.999 57.143 0.54 0.00 46.48 3.36
3365 4326 5.308825 AGAAAACTAATGGTCACCAGTGAG 58.691 41.667 7.15 3.88 40.75 3.51
3408 4369 4.103103 CTCTCTCGGTGCGACGCA 62.103 66.667 20.50 20.50 35.60 5.24
3424 4391 2.548920 CCTTGTTTCCTCGTGCTTCTCT 60.549 50.000 0.00 0.00 0.00 3.10
3433 4400 2.477754 GACGTTTACCCTTGTTTCCTCG 59.522 50.000 0.00 0.00 0.00 4.63
3437 4404 2.032636 CACCGACGTTTACCCTTGTTTC 60.033 50.000 0.00 0.00 0.00 2.78
3501 4468 3.488569 TGCCTCCCATTAGCCCCG 61.489 66.667 0.00 0.00 0.00 5.73
3531 4498 9.322776 CTGAAAATTGTATATTATCTTGCTCGC 57.677 33.333 0.00 0.00 0.00 5.03
3548 4515 6.148480 CCAGTAGTTCTCAGGACTGAAAATTG 59.852 42.308 0.00 0.00 41.51 2.32
3553 4520 2.563179 GCCAGTAGTTCTCAGGACTGAA 59.437 50.000 0.00 0.00 41.51 3.02
3557 4524 2.452505 AGAGCCAGTAGTTCTCAGGAC 58.547 52.381 0.00 0.00 28.19 3.85
3558 4525 2.909504 AGAGCCAGTAGTTCTCAGGA 57.090 50.000 0.00 0.00 28.19 3.86
3563 4530 2.498078 GGTTGCTAGAGCCAGTAGTTCT 59.502 50.000 0.00 0.00 41.18 3.01
3565 4532 1.204941 CGGTTGCTAGAGCCAGTAGTT 59.795 52.381 0.00 0.00 41.18 2.24
3567 4534 0.818296 ACGGTTGCTAGAGCCAGTAG 59.182 55.000 0.00 0.00 41.18 2.57
3569 4536 1.592223 GACGGTTGCTAGAGCCAGT 59.408 57.895 0.00 0.00 41.18 4.00
3570 4537 1.517257 CGACGGTTGCTAGAGCCAG 60.517 63.158 0.00 0.00 41.18 4.85
3571 4538 1.529152 TTCGACGGTTGCTAGAGCCA 61.529 55.000 0.00 0.00 41.18 4.75
3572 4539 0.802607 CTTCGACGGTTGCTAGAGCC 60.803 60.000 0.00 0.00 41.18 4.70
3573 4540 0.170561 TCTTCGACGGTTGCTAGAGC 59.829 55.000 0.00 0.00 42.50 4.09
3597 4564 2.104622 CCCTGATGTTTGCCACCTTTTT 59.895 45.455 0.00 0.00 0.00 1.94
3598 4565 1.693606 CCCTGATGTTTGCCACCTTTT 59.306 47.619 0.00 0.00 0.00 2.27
3601 4568 0.038744 CTCCCTGATGTTTGCCACCT 59.961 55.000 0.00 0.00 0.00 4.00
3602 4569 0.038166 TCTCCCTGATGTTTGCCACC 59.962 55.000 0.00 0.00 0.00 4.61
3604 4571 1.887956 GCTTCTCCCTGATGTTTGCCA 60.888 52.381 0.00 0.00 0.00 4.92
3610 4618 1.202330 CTCCTGCTTCTCCCTGATGT 58.798 55.000 0.00 0.00 0.00 3.06
3773 4808 5.981915 ACCGTGTTACTAACTTTCAAGACTC 59.018 40.000 0.71 0.00 0.00 3.36
3811 4878 3.200483 GACACACCAAGTAAAAGGTCGT 58.800 45.455 0.00 0.00 35.52 4.34
3821 4888 0.804544 CACGACACGACACACCAAGT 60.805 55.000 0.00 0.00 0.00 3.16
3848 4915 4.537135 TGCTCCTTTTCTACCTACAGTG 57.463 45.455 0.00 0.00 0.00 3.66
4038 5133 0.764890 TTCAGTCTTCACACAGGGGG 59.235 55.000 0.00 0.00 0.00 5.40
4039 5134 1.694150 TCTTCAGTCTTCACACAGGGG 59.306 52.381 0.00 0.00 0.00 4.79
4049 5144 2.957006 ACGTGTGGTACTCTTCAGTCTT 59.043 45.455 0.00 0.00 33.62 3.01
4129 5224 0.396435 TTCGTCAGACAAGGCATGGT 59.604 50.000 0.41 0.00 0.00 3.55
4158 5259 2.484062 GGACGGCATTCAGGCATGG 61.484 63.158 0.00 0.00 44.47 3.66
4182 5283 3.181520 GCGTACAGTATTTGGTCTTGCAG 60.182 47.826 0.00 0.00 0.00 4.41
4198 5299 6.603237 CTCAATTAGGATCAATTGCGTACA 57.397 37.500 11.75 0.00 42.89 2.90
4261 5383 1.002087 GAGGTGAATTGGAGTGGACGT 59.998 52.381 0.00 0.00 0.00 4.34
4266 5388 5.043903 CGTATGTAGAGGTGAATTGGAGTG 58.956 45.833 0.00 0.00 0.00 3.51
4303 5425 1.742831 CCGTGGCATTGCTTAGCTTTA 59.257 47.619 8.82 0.00 0.00 1.85
4330 5452 9.851686 AATTACACTCTCCTAATTAATGCATCA 57.148 29.630 0.00 0.00 0.00 3.07
4348 5470 9.392259 GGAAGGCAGTTTACTATAAATTACACT 57.608 33.333 0.00 0.00 0.00 3.55
4353 5475 8.749354 CCTTTGGAAGGCAGTTTACTATAAATT 58.251 33.333 0.00 0.00 42.78 1.82
4354 5476 8.293699 CCTTTGGAAGGCAGTTTACTATAAAT 57.706 34.615 0.00 0.00 42.78 1.40
4589 5711 2.886730 AATCGATGGAACCACCGGCC 62.887 60.000 7.79 0.00 42.61 6.13
4906 6072 3.118665 TCTCCACATGCATTTCATCTCGA 60.119 43.478 0.00 0.00 31.79 4.04
4947 6113 4.000325 TCGCATTATATATGGTGGTGTGC 59.000 43.478 0.00 0.00 0.00 4.57
4950 6116 4.937620 AGCTTCGCATTATATATGGTGGTG 59.062 41.667 0.00 0.00 0.00 4.17
5113 6279 7.553044 GCAATGTTATTTTAGTACTCCCTCTGT 59.447 37.037 0.00 0.00 0.00 3.41
5114 6280 7.552687 TGCAATGTTATTTTAGTACTCCCTCTG 59.447 37.037 0.00 0.00 0.00 3.35
5115 6281 7.630082 TGCAATGTTATTTTAGTACTCCCTCT 58.370 34.615 0.00 0.00 0.00 3.69
5116 6282 7.012421 CCTGCAATGTTATTTTAGTACTCCCTC 59.988 40.741 0.00 0.00 0.00 4.30
5117 6283 6.828785 CCTGCAATGTTATTTTAGTACTCCCT 59.171 38.462 0.00 0.00 0.00 4.20
5118 6284 6.826741 TCCTGCAATGTTATTTTAGTACTCCC 59.173 38.462 0.00 0.00 0.00 4.30
5119 6285 7.553044 ACTCCTGCAATGTTATTTTAGTACTCC 59.447 37.037 0.00 0.00 0.00 3.85
5120 6286 8.391106 CACTCCTGCAATGTTATTTTAGTACTC 58.609 37.037 0.00 0.00 0.00 2.59
5121 6287 7.336931 CCACTCCTGCAATGTTATTTTAGTACT 59.663 37.037 0.00 0.00 0.00 2.73
5122 6288 7.335924 TCCACTCCTGCAATGTTATTTTAGTAC 59.664 37.037 0.00 0.00 0.00 2.73
5123 6289 7.398829 TCCACTCCTGCAATGTTATTTTAGTA 58.601 34.615 0.00 0.00 0.00 1.82
5130 6296 3.019564 GCTTCCACTCCTGCAATGTTAT 58.980 45.455 0.00 0.00 0.00 1.89
5227 6393 9.983024 TTTTCTATATTAACCAACCATCAGGAA 57.017 29.630 0.00 0.00 38.69 3.36
5228 6394 9.627123 CTTTTCTATATTAACCAACCATCAGGA 57.373 33.333 0.00 0.00 38.69 3.86
5299 6465 8.923270 TCCTAGGAGAGTAGTAGTTAGTAGAAC 58.077 40.741 7.62 0.00 0.00 3.01
5300 6466 9.499369 TTCCTAGGAGAGTAGTAGTTAGTAGAA 57.501 37.037 12.26 0.00 0.00 2.10
5304 6470 8.054572 CCTTTTCCTAGGAGAGTAGTAGTTAGT 58.945 40.741 12.26 0.00 37.50 2.24
5305 6471 8.054572 ACCTTTTCCTAGGAGAGTAGTAGTTAG 58.945 40.741 12.26 0.00 38.73 2.34
5306 6472 7.937591 ACCTTTTCCTAGGAGAGTAGTAGTTA 58.062 38.462 12.26 0.00 38.73 2.24
5307 6473 6.803017 ACCTTTTCCTAGGAGAGTAGTAGTT 58.197 40.000 12.26 0.00 38.73 2.24
5308 6474 6.405872 ACCTTTTCCTAGGAGAGTAGTAGT 57.594 41.667 12.26 4.76 38.73 2.73
5309 6475 7.804147 TCTACCTTTTCCTAGGAGAGTAGTAG 58.196 42.308 24.31 22.68 38.73 2.57
5310 6476 7.761981 TCTACCTTTTCCTAGGAGAGTAGTA 57.238 40.000 24.31 17.50 38.73 1.82
5311 6477 6.655376 TCTACCTTTTCCTAGGAGAGTAGT 57.345 41.667 24.31 17.37 38.73 2.73
5312 6478 6.890814 TGTTCTACCTTTTCCTAGGAGAGTAG 59.109 42.308 21.87 21.87 38.73 2.57
5315 6568 5.952947 TCTGTTCTACCTTTTCCTAGGAGAG 59.047 44.000 12.26 13.55 38.73 3.20
5342 6595 7.609918 ACTGTGCATTCCATGTAGTAACAAATA 59.390 33.333 0.00 0.00 39.58 1.40
5375 6628 6.366332 CAGGCTGATTTCCGTTCAGTATATAC 59.634 42.308 9.42 4.60 42.12 1.47
5388 6643 0.613012 AAGGGTGCAGGCTGATTTCC 60.613 55.000 20.86 13.05 0.00 3.13
5393 6648 1.210478 GATTAGAAGGGTGCAGGCTGA 59.790 52.381 20.86 0.00 0.00 4.26
5394 6649 1.211457 AGATTAGAAGGGTGCAGGCTG 59.789 52.381 10.94 10.94 0.00 4.85
5395 6650 1.211457 CAGATTAGAAGGGTGCAGGCT 59.789 52.381 0.00 0.00 0.00 4.58
5396 6651 1.065126 ACAGATTAGAAGGGTGCAGGC 60.065 52.381 0.00 0.00 0.00 4.85
5397 6652 3.012518 CAACAGATTAGAAGGGTGCAGG 58.987 50.000 0.00 0.00 0.00 4.85
5398 6653 3.686726 GTCAACAGATTAGAAGGGTGCAG 59.313 47.826 0.00 0.00 0.00 4.41
5399 6654 3.072330 TGTCAACAGATTAGAAGGGTGCA 59.928 43.478 0.00 0.00 0.00 4.57
5400 6655 3.674997 TGTCAACAGATTAGAAGGGTGC 58.325 45.455 0.00 0.00 0.00 5.01
5401 6656 6.633500 TTTTGTCAACAGATTAGAAGGGTG 57.367 37.500 0.00 0.00 0.00 4.61
5402 6657 7.004086 TCATTTTGTCAACAGATTAGAAGGGT 58.996 34.615 0.00 0.00 0.00 4.34
5485 6746 0.391130 CCGGAAGAAACGATCCAGCA 60.391 55.000 0.00 0.00 35.34 4.41
5536 6797 3.397482 AGGCATGACGAAATCAGCTATC 58.603 45.455 0.00 0.00 41.91 2.08
5566 6827 1.079127 AGCGACCCCAACGATGAAG 60.079 57.895 0.00 0.00 0.00 3.02
5829 7094 0.109412 GTTACCGTCGTCCAGTCCAG 60.109 60.000 0.00 0.00 0.00 3.86
5832 7097 0.595095 ACTGTTACCGTCGTCCAGTC 59.405 55.000 0.00 0.00 31.90 3.51
5836 7101 4.447365 CGACTGTTACCGTCGTCC 57.553 61.111 18.53 0.00 46.56 4.79
5840 7105 2.855180 TCGAAATCGACTGTTACCGTC 58.145 47.619 0.58 0.00 44.22 4.79
5852 7117 7.603297 AACAACAAACTTTATGTCGAAATCG 57.397 32.000 0.00 0.00 41.45 3.34
5866 7131 8.655970 GCAGAACAAGAAATTAAACAACAAACT 58.344 29.630 0.00 0.00 0.00 2.66
5867 7132 8.655970 AGCAGAACAAGAAATTAAACAACAAAC 58.344 29.630 0.00 0.00 0.00 2.93
5868 7133 8.770438 AGCAGAACAAGAAATTAAACAACAAA 57.230 26.923 0.00 0.00 0.00 2.83
5870 7135 9.462174 CATAGCAGAACAAGAAATTAAACAACA 57.538 29.630 0.00 0.00 0.00 3.33
5871 7136 9.677567 TCATAGCAGAACAAGAAATTAAACAAC 57.322 29.630 0.00 0.00 0.00 3.32
5886 7151 2.353889 CACCTGTGCATCATAGCAGAAC 59.646 50.000 1.55 0.00 46.69 3.01
5995 7260 8.344831 TGTTGATGCAGAATAATGTAGTATTGC 58.655 33.333 0.00 0.00 0.00 3.56
5996 7261 9.874215 CTGTTGATGCAGAATAATGTAGTATTG 57.126 33.333 0.00 0.00 38.70 1.90
5998 7263 9.618890 AACTGTTGATGCAGAATAATGTAGTAT 57.381 29.630 0.00 0.00 39.62 2.12
5999 7264 9.448438 AAACTGTTGATGCAGAATAATGTAGTA 57.552 29.630 0.00 0.00 39.62 1.82
6000 7265 7.928307 AACTGTTGATGCAGAATAATGTAGT 57.072 32.000 0.00 0.00 39.62 2.73
6001 7266 8.453320 TGAAACTGTTGATGCAGAATAATGTAG 58.547 33.333 0.00 0.00 39.62 2.74
6025 7291 4.455533 GTCAGTCATGCCACATTTAGTTGA 59.544 41.667 0.00 0.00 0.00 3.18
6039 7305 1.201954 CGCCACAAATCGTCAGTCATG 60.202 52.381 0.00 0.00 0.00 3.07
6048 7314 2.981560 AAGCAGGCGCCACAAATCG 61.982 57.895 31.54 8.48 39.83 3.34
6089 7355 5.793817 TGACACAGTGCTGTAACAAGATAT 58.206 37.500 4.37 0.00 42.83 1.63
6107 7373 1.815003 CCCTTGAGCCAAATCTGACAC 59.185 52.381 0.00 0.00 0.00 3.67
6262 7531 6.040842 AGCAAATGGTAAGTTCAGAAACACAT 59.959 34.615 0.00 0.00 37.88 3.21
6275 7544 6.199937 AGCAGAACAATAGCAAATGGTAAG 57.800 37.500 0.00 0.00 0.00 2.34
6337 7606 4.202090 GGAACGTAGGTACCATACAAGAGG 60.202 50.000 15.94 3.83 0.00 3.69
6364 7633 6.669591 CAGGACCTGATATCATATACTCCCAA 59.330 42.308 17.22 0.00 32.44 4.12
6374 7643 3.392616 GTGGAACCAGGACCTGATATCAT 59.607 47.826 23.77 1.91 32.44 2.45
6375 7644 2.771943 GTGGAACCAGGACCTGATATCA 59.228 50.000 23.77 12.38 32.44 2.15
6473 7743 4.494350 TTTGAAGCTCATCAGTTTCTGC 57.506 40.909 0.00 0.00 39.86 4.26
6477 7747 8.416329 AGTTACAATTTTGAAGCTCATCAGTTT 58.584 29.630 0.00 0.00 0.00 2.66
6497 7804 6.481976 CCGCATTTGACCTGATATAAGTTACA 59.518 38.462 0.00 0.00 0.00 2.41
6533 7840 4.357279 GCAGCCTGGCCCAGAGTT 62.357 66.667 13.74 0.00 32.44 3.01
6757 8064 4.828296 GCCTGGCACCATGAGGGG 62.828 72.222 15.17 0.00 42.91 4.79
6826 8133 7.328249 CAGTTACAGCTAGAAGAGAGAAACTTG 59.672 40.741 0.00 0.00 0.00 3.16
6827 8134 7.231722 TCAGTTACAGCTAGAAGAGAGAAACTT 59.768 37.037 0.00 0.00 0.00 2.66
6833 8140 6.374333 AGAACTCAGTTACAGCTAGAAGAGAG 59.626 42.308 0.00 6.85 0.00 3.20
6860 8168 3.443681 ACAATCAGAATTTACCCTTGGCG 59.556 43.478 0.00 0.00 0.00 5.69
6892 8200 2.093921 TCACAGAACTGTTGACCGTGAA 60.094 45.455 4.63 0.00 42.83 3.18
6893 8201 1.478916 TCACAGAACTGTTGACCGTGA 59.521 47.619 4.63 2.57 42.83 4.35
6894 8202 1.934589 TCACAGAACTGTTGACCGTG 58.065 50.000 4.63 0.13 42.83 4.94
6895 8203 2.483876 CATCACAGAACTGTTGACCGT 58.516 47.619 4.63 0.00 42.83 4.83
6896 8204 1.800586 CCATCACAGAACTGTTGACCG 59.199 52.381 4.63 0.00 42.83 4.79
6897 8205 1.537202 GCCATCACAGAACTGTTGACC 59.463 52.381 4.63 0.00 42.83 4.02
6898 8206 1.537202 GGCCATCACAGAACTGTTGAC 59.463 52.381 0.00 0.00 42.83 3.18
6899 8207 1.142667 TGGCCATCACAGAACTGTTGA 59.857 47.619 0.00 7.04 42.83 3.18
6900 8208 1.608055 TGGCCATCACAGAACTGTTG 58.392 50.000 0.00 2.63 42.83 3.33
6942 8250 5.429130 TGTACAATTATGTGCCCGTATTGA 58.571 37.500 0.00 0.00 40.99 2.57
7071 8379 2.097825 GCCAGTGCATGATTCTTTCCT 58.902 47.619 0.00 0.00 37.47 3.36
7153 8461 5.680619 AGAATGGAGTGTTAACTGTTGACA 58.319 37.500 13.35 13.35 36.52 3.58
7176 8484 3.388676 ACGTCATTACCCGGGATAATCAA 59.611 43.478 32.02 13.82 0.00 2.57
7190 8498 3.127589 CACAGTGTGGTCAACGTCATTA 58.872 45.455 15.86 0.00 0.00 1.90
7197 8505 0.884704 ATCGGCACAGTGTGGTCAAC 60.885 55.000 24.24 7.30 33.64 3.18
7204 8512 2.479566 AAAGATCATCGGCACAGTGT 57.520 45.000 1.61 0.00 0.00 3.55
7209 8523 3.179443 TCCTGTAAAGATCATCGGCAC 57.821 47.619 0.00 0.00 0.00 5.01
7213 8527 3.804325 ACGCATTCCTGTAAAGATCATCG 59.196 43.478 0.00 0.00 0.00 3.84
7222 8536 5.468746 GGCTTATTCATACGCATTCCTGTAA 59.531 40.000 0.00 0.00 29.99 2.41
7224 8538 3.815401 GGCTTATTCATACGCATTCCTGT 59.185 43.478 0.00 0.00 29.99 4.00
7234 8548 5.526111 ACGGTGTACAATGGCTTATTCATAC 59.474 40.000 0.00 0.00 0.00 2.39
7403 8717 3.202818 TGAAGATGGGTAGGATGTTGCAT 59.797 43.478 0.00 0.00 0.00 3.96
7412 8726 3.152341 GCCATGAATGAAGATGGGTAGG 58.848 50.000 0.00 0.00 39.75 3.18
7489 8803 5.749596 TCATTGAAAGCTCGACTGAAAAA 57.250 34.783 0.00 0.00 0.00 1.94
7803 9136 7.161404 TGTTGTCATCTATACACAAAGCTTCT 58.839 34.615 0.00 0.00 31.95 2.85
7902 9239 8.502387 CAAATGCAATATTTCCGGAAAGAAAAA 58.498 29.630 31.58 17.12 39.11 1.94
7903 9240 7.360776 GCAAATGCAATATTTCCGGAAAGAAAA 60.361 33.333 31.58 18.39 38.88 2.29
7904 9241 6.091986 GCAAATGCAATATTTCCGGAAAGAAA 59.908 34.615 31.58 20.67 39.32 2.52
7905 9242 5.580297 GCAAATGCAATATTTCCGGAAAGAA 59.420 36.000 31.58 22.98 41.59 2.52
7906 9243 5.108517 GCAAATGCAATATTTCCGGAAAGA 58.891 37.500 31.58 28.57 41.59 2.52
7907 9244 5.393902 GCAAATGCAATATTTCCGGAAAG 57.606 39.130 31.58 20.14 41.59 2.62
7969 9306 6.488006 CCAAATCATCTCCCTGTCGAAATATT 59.512 38.462 0.00 0.00 0.00 1.28
8197 9568 0.766131 TACGTTTCCCCTCTTTGGCA 59.234 50.000 0.00 0.00 0.00 4.92
8269 9641 2.205074 GTGTGAGTGATATGCTTCCCG 58.795 52.381 0.00 0.00 0.00 5.14
8358 9731 5.988287 TCTGACTATGCATAAATGGTGTCA 58.012 37.500 18.03 18.03 0.00 3.58
8465 9839 7.705325 AGTTGCACCTTGTAGTATTTCGTATAG 59.295 37.037 0.00 0.00 0.00 1.31
8485 9859 8.568676 TGTACTTTGCCTTTAATATAGTTGCA 57.431 30.769 0.00 0.00 0.00 4.08
8524 9903 7.033791 TCTCTTTTTCGATTATTGTCTAGCGT 58.966 34.615 0.00 0.00 0.00 5.07
8676 13562 6.693315 TCTTTACACTTCTGGGTTTTTCTG 57.307 37.500 0.00 0.00 0.00 3.02
8768 13656 6.091986 AGGCTTTGTTGTTGTTATTGTTGTTG 59.908 34.615 0.00 0.00 0.00 3.33
8769 13657 6.169800 AGGCTTTGTTGTTGTTATTGTTGTT 58.830 32.000 0.00 0.00 0.00 2.83
8770 13658 5.729510 AGGCTTTGTTGTTGTTATTGTTGT 58.270 33.333 0.00 0.00 0.00 3.32
8771 13659 6.660887 AAGGCTTTGTTGTTGTTATTGTTG 57.339 33.333 0.00 0.00 0.00 3.33
8772 13660 8.038351 ACTAAAGGCTTTGTTGTTGTTATTGTT 58.962 29.630 22.32 0.00 0.00 2.83
8773 13661 7.552459 ACTAAAGGCTTTGTTGTTGTTATTGT 58.448 30.769 22.32 0.00 0.00 2.71
8774 13662 7.169140 GGACTAAAGGCTTTGTTGTTGTTATTG 59.831 37.037 22.32 0.00 0.00 1.90
8775 13663 7.207383 GGACTAAAGGCTTTGTTGTTGTTATT 58.793 34.615 22.32 0.00 0.00 1.40
8776 13664 6.239204 GGGACTAAAGGCTTTGTTGTTGTTAT 60.239 38.462 22.32 0.00 0.00 1.89
8777 13665 5.068067 GGGACTAAAGGCTTTGTTGTTGTTA 59.932 40.000 22.32 0.00 0.00 2.41
8778 13666 4.142026 GGGACTAAAGGCTTTGTTGTTGTT 60.142 41.667 22.32 0.00 0.00 2.83
8779 13667 3.383505 GGGACTAAAGGCTTTGTTGTTGT 59.616 43.478 22.32 10.58 0.00 3.32
8780 13668 3.383185 TGGGACTAAAGGCTTTGTTGTTG 59.617 43.478 22.32 7.79 0.00 3.33
8781 13669 3.637769 TGGGACTAAAGGCTTTGTTGTT 58.362 40.909 22.32 1.84 0.00 2.83
8782 13670 3.306472 TGGGACTAAAGGCTTTGTTGT 57.694 42.857 22.32 16.69 0.00 3.32
8783 13671 4.142049 TGTTTGGGACTAAAGGCTTTGTTG 60.142 41.667 22.32 13.85 0.00 3.33
8784 13672 4.027437 TGTTTGGGACTAAAGGCTTTGTT 58.973 39.130 22.32 8.73 0.00 2.83
8785 13673 3.637769 TGTTTGGGACTAAAGGCTTTGT 58.362 40.909 22.32 16.86 0.00 2.83
8786 13674 4.099419 ACTTGTTTGGGACTAAAGGCTTTG 59.901 41.667 22.32 13.97 0.00 2.77
8787 13675 4.286707 ACTTGTTTGGGACTAAAGGCTTT 58.713 39.130 17.76 17.76 0.00 3.51
8788 13676 3.910989 ACTTGTTTGGGACTAAAGGCTT 58.089 40.909 0.00 0.00 0.00 4.35
8789 13677 3.595190 ACTTGTTTGGGACTAAAGGCT 57.405 42.857 0.00 0.00 0.00 4.58
8790 13678 3.977427 CAACTTGTTTGGGACTAAAGGC 58.023 45.455 0.00 0.00 0.00 4.35
8801 13689 1.995376 AGCCTACCCCAACTTGTTTG 58.005 50.000 0.00 0.00 34.63 2.93
8802 13690 2.983898 TCTAGCCTACCCCAACTTGTTT 59.016 45.455 0.00 0.00 0.00 2.83
8803 13691 2.572104 CTCTAGCCTACCCCAACTTGTT 59.428 50.000 0.00 0.00 0.00 2.83
8804 13692 2.188817 CTCTAGCCTACCCCAACTTGT 58.811 52.381 0.00 0.00 0.00 3.16
8805 13693 1.486726 CCTCTAGCCTACCCCAACTTG 59.513 57.143 0.00 0.00 0.00 3.16
8806 13694 1.080666 ACCTCTAGCCTACCCCAACTT 59.919 52.381 0.00 0.00 0.00 2.66
8807 13695 0.717196 ACCTCTAGCCTACCCCAACT 59.283 55.000 0.00 0.00 0.00 3.16
8808 13696 0.831307 CACCTCTAGCCTACCCCAAC 59.169 60.000 0.00 0.00 0.00 3.77
8809 13697 0.714180 TCACCTCTAGCCTACCCCAA 59.286 55.000 0.00 0.00 0.00 4.12
8810 13698 0.714180 TTCACCTCTAGCCTACCCCA 59.286 55.000 0.00 0.00 0.00 4.96
8811 13699 1.485480 GTTTCACCTCTAGCCTACCCC 59.515 57.143 0.00 0.00 0.00 4.95
8812 13700 1.485480 GGTTTCACCTCTAGCCTACCC 59.515 57.143 0.00 0.00 34.73 3.69
8813 13701 1.485480 GGGTTTCACCTCTAGCCTACC 59.515 57.143 0.00 0.00 38.64 3.18
8814 13702 2.185387 TGGGTTTCACCTCTAGCCTAC 58.815 52.381 0.00 0.00 38.64 3.18
8815 13703 2.634639 TGGGTTTCACCTCTAGCCTA 57.365 50.000 0.00 0.00 38.64 3.93
8816 13704 1.972588 ATGGGTTTCACCTCTAGCCT 58.027 50.000 0.00 0.00 38.64 4.58
8817 13705 3.454812 TCTTATGGGTTTCACCTCTAGCC 59.545 47.826 0.00 0.00 38.64 3.93
8818 13706 4.755266 TCTTATGGGTTTCACCTCTAGC 57.245 45.455 0.00 0.00 38.64 3.42
8819 13707 6.515862 CGAGATCTTATGGGTTTCACCTCTAG 60.516 46.154 0.00 0.00 38.64 2.43
8820 13708 5.302059 CGAGATCTTATGGGTTTCACCTCTA 59.698 44.000 0.00 0.00 38.64 2.43
8821 13709 4.100189 CGAGATCTTATGGGTTTCACCTCT 59.900 45.833 0.00 0.00 38.64 3.69
8822 13710 4.372656 CGAGATCTTATGGGTTTCACCTC 58.627 47.826 0.00 0.00 38.64 3.85
8823 13711 3.432326 GCGAGATCTTATGGGTTTCACCT 60.432 47.826 0.00 0.00 38.64 4.00
8824 13712 2.872858 GCGAGATCTTATGGGTTTCACC 59.127 50.000 0.00 0.00 37.60 4.02
8825 13713 3.531538 TGCGAGATCTTATGGGTTTCAC 58.468 45.455 0.00 0.00 0.00 3.18
8826 13714 3.904800 TGCGAGATCTTATGGGTTTCA 57.095 42.857 0.00 0.00 0.00 2.69
8827 13715 3.312697 GGTTGCGAGATCTTATGGGTTTC 59.687 47.826 0.00 0.00 0.00 2.78
8828 13716 3.279434 GGTTGCGAGATCTTATGGGTTT 58.721 45.455 0.00 0.00 0.00 3.27
8829 13717 2.238646 TGGTTGCGAGATCTTATGGGTT 59.761 45.455 0.00 0.00 0.00 4.11
8830 13718 1.837439 TGGTTGCGAGATCTTATGGGT 59.163 47.619 0.00 0.00 0.00 4.51
8831 13719 2.614057 GTTGGTTGCGAGATCTTATGGG 59.386 50.000 0.00 0.00 0.00 4.00
8832 13720 3.535561 AGTTGGTTGCGAGATCTTATGG 58.464 45.455 0.00 0.00 0.00 2.74
8833 13721 4.183865 TGAGTTGGTTGCGAGATCTTATG 58.816 43.478 0.00 0.00 0.00 1.90
8834 13722 4.471904 TGAGTTGGTTGCGAGATCTTAT 57.528 40.909 0.00 0.00 0.00 1.73
8835 13723 3.953712 TGAGTTGGTTGCGAGATCTTA 57.046 42.857 0.00 0.00 0.00 2.10
8836 13724 2.839486 TGAGTTGGTTGCGAGATCTT 57.161 45.000 0.00 0.00 0.00 2.40
8837 13725 2.625737 CATGAGTTGGTTGCGAGATCT 58.374 47.619 0.00 0.00 0.00 2.75
8838 13726 1.667724 CCATGAGTTGGTTGCGAGATC 59.332 52.381 0.00 0.00 40.99 2.75
8839 13727 1.742761 CCATGAGTTGGTTGCGAGAT 58.257 50.000 0.00 0.00 40.99 2.75
8840 13728 3.231734 CCATGAGTTGGTTGCGAGA 57.768 52.632 0.00 0.00 40.99 4.04
8849 13737 0.607217 TGTGCCAGAGCCATGAGTTG 60.607 55.000 0.00 0.00 38.69 3.16
8850 13738 0.330604 ATGTGCCAGAGCCATGAGTT 59.669 50.000 0.00 0.00 38.69 3.01
8851 13739 0.393944 CATGTGCCAGAGCCATGAGT 60.394 55.000 0.00 0.00 44.14 3.41
8852 13740 1.101635 CCATGTGCCAGAGCCATGAG 61.102 60.000 14.22 5.17 44.14 2.90
8853 13741 1.077285 CCATGTGCCAGAGCCATGA 60.077 57.895 14.22 0.00 44.14 3.07
8854 13742 0.467474 ATCCATGTGCCAGAGCCATG 60.467 55.000 8.59 8.59 42.54 3.66
8855 13743 1.073444 CTATCCATGTGCCAGAGCCAT 59.927 52.381 0.00 0.00 38.69 4.40
8856 13744 0.471191 CTATCCATGTGCCAGAGCCA 59.529 55.000 0.00 0.00 38.69 4.75
8857 13745 0.888285 GCTATCCATGTGCCAGAGCC 60.888 60.000 0.00 0.00 38.69 4.70
8858 13746 0.179037 TGCTATCCATGTGCCAGAGC 60.179 55.000 0.00 0.00 40.48 4.09
8859 13747 2.336945 TTGCTATCCATGTGCCAGAG 57.663 50.000 0.00 0.00 0.00 3.35


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.