Multiple sequence alignment - TraesCS2B01G304200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G304200 chr2B 100.000 4469 0 0 4315 8783 432138603 432134135 0.000000e+00 8253.0
1 TraesCS2B01G304200 chr2B 100.000 3905 0 0 1 3905 432142917 432139013 0.000000e+00 7212.0
2 TraesCS2B01G304200 chr2B 93.701 127 6 2 5458 5583 766070373 766070248 1.160000e-43 189.0
3 TraesCS2B01G304200 chr2B 87.179 117 9 4 3396 3512 432139359 432139249 2.570000e-25 128.0
4 TraesCS2B01G304200 chr2B 87.179 117 9 4 3559 3669 432139522 432139406 2.570000e-25 128.0
5 TraesCS2B01G304200 chr2D 93.298 3566 130 50 1 3512 363983312 363979802 0.000000e+00 5160.0
6 TraesCS2B01G304200 chr2D 96.016 2284 74 4 5831 8100 363977817 363975537 0.000000e+00 3698.0
7 TraesCS2B01G304200 chr2D 92.757 1146 44 18 4332 5462 363979299 363978178 0.000000e+00 1620.0
8 TraesCS2B01G304200 chr2D 93.470 536 16 7 8261 8783 363975540 363975011 0.000000e+00 778.0
9 TraesCS2B01G304200 chr2D 86.111 360 32 9 3559 3903 363979918 363979562 1.080000e-98 372.0
10 TraesCS2B01G304200 chr2D 91.770 243 20 0 5579 5821 363978177 363977935 1.090000e-88 339.0
11 TraesCS2B01G304200 chr2D 93.023 129 7 2 8123 8251 293525016 293524890 4.190000e-43 187.0
12 TraesCS2B01G304200 chr2A 95.506 2292 74 19 5844 8126 489963853 489961582 0.000000e+00 3635.0
13 TraesCS2B01G304200 chr2A 95.298 1680 59 10 1 1672 489970139 489968472 0.000000e+00 2647.0
14 TraesCS2B01G304200 chr2A 91.028 1839 82 32 1748 3532 489968320 489966511 0.000000e+00 2405.0
15 TraesCS2B01G304200 chr2A 93.562 699 22 8 4322 5004 489965700 489965009 0.000000e+00 1020.0
16 TraesCS2B01G304200 chr2A 96.266 482 10 5 4989 5467 489964646 489964170 0.000000e+00 784.0
17 TraesCS2B01G304200 chr2A 94.095 525 10 7 8272 8783 489961349 489960833 0.000000e+00 778.0
18 TraesCS2B01G304200 chr2A 90.625 384 28 6 3526 3903 489966480 489966099 3.660000e-138 503.0
19 TraesCS2B01G304200 chr2A 91.903 247 14 3 5579 5823 489964172 489963930 3.040000e-89 340.0
20 TraesCS2B01G304200 chr2A 93.162 117 3 2 3396 3512 489966447 489966336 5.450000e-37 167.0
21 TraesCS2B01G304200 chr2A 90.000 70 7 0 3559 3628 489966654 489966585 3.380000e-14 91.6
22 TraesCS2B01G304200 chr6D 85.338 1139 163 4 6598 7734 222734425 222735561 0.000000e+00 1175.0
23 TraesCS2B01G304200 chr6D 79.676 556 108 4 1001 1555 222721172 222721723 6.390000e-106 396.0
24 TraesCS2B01G304200 chr6D 83.911 404 48 14 2966 3367 222722330 222722718 3.870000e-98 370.0
25 TraesCS2B01G304200 chr6D 93.651 126 6 2 8122 8247 68083192 68083069 4.190000e-43 187.0
26 TraesCS2B01G304200 chr6D 89.781 137 12 2 5464 5599 17166756 17166621 3.260000e-39 174.0
27 TraesCS2B01G304200 chr6B 85.338 1139 163 4 6598 7734 391095003 391096139 0.000000e+00 1175.0
28 TraesCS2B01G304200 chr6B 83.333 444 74 0 1112 1555 391071567 391072010 2.280000e-110 411.0
29 TraesCS2B01G304200 chr6B 83.416 404 50 14 2966 3367 391072617 391073005 8.380000e-95 359.0
30 TraesCS2B01G304200 chr6B 88.312 154 15 3 8098 8251 613573046 613572896 1.950000e-41 182.0
31 TraesCS2B01G304200 chr6A 85.250 1139 164 4 6598 7734 278553320 278552184 0.000000e+00 1170.0
32 TraesCS2B01G304200 chr6A 82.883 444 76 0 1112 1555 278573718 278573275 4.940000e-107 399.0
33 TraesCS2B01G304200 chr6A 83.911 404 48 14 2966 3367 278572667 278572279 3.870000e-98 370.0
34 TraesCS2B01G304200 chr6A 89.781 137 10 4 5449 5582 537483637 537483502 1.170000e-38 172.0
35 TraesCS2B01G304200 chr3D 93.701 127 6 2 8123 8248 323325967 323326092 1.160000e-43 189.0
36 TraesCS2B01G304200 chrUn 93.651 126 6 2 8123 8248 10355681 10355804 4.190000e-43 187.0
37 TraesCS2B01G304200 chrUn 93.651 126 6 2 8123 8248 287712302 287712425 4.190000e-43 187.0
38 TraesCS2B01G304200 chrUn 90.299 134 11 2 5466 5597 21233109 21233242 3.260000e-39 174.0
39 TraesCS2B01G304200 chr4B 81.982 222 38 2 4719 4939 81994479 81994699 4.190000e-43 187.0
40 TraesCS2B01G304200 chr7A 94.262 122 6 1 5466 5586 632588268 632588147 1.510000e-42 185.0
41 TraesCS2B01G304200 chr4D 93.023 129 6 1 8123 8251 81896480 81896605 1.510000e-42 185.0
42 TraesCS2B01G304200 chr5A 92.308 130 8 2 8119 8248 46282337 46282464 5.420000e-42 183.0
43 TraesCS2B01G304200 chr4A 94.915 118 5 1 5465 5581 732350162 732350279 5.420000e-42 183.0
44 TraesCS2B01G304200 chr4A 81.448 221 41 0 4719 4939 542042025 542041805 1.950000e-41 182.0
45 TraesCS2B01G304200 chr4A 92.742 124 7 2 5463 5584 738312086 738312209 2.520000e-40 178.0
46 TraesCS2B01G304200 chr4A 85.455 165 8 9 8096 8247 690940665 690940504 3.280000e-34 158.0
47 TraesCS2B01G304200 chr7B 91.729 133 8 3 8120 8251 483328206 483328076 1.950000e-41 182.0
48 TraesCS2B01G304200 chr1D 91.667 132 8 2 5459 5587 1026732 1026863 7.010000e-41 180.0
49 TraesCS2B01G304200 chr1B 86.275 153 20 1 5456 5607 555753221 555753069 1.960000e-36 165.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G304200 chr2B 432134135 432142917 8782 True 3930.25 8253 93.5895 1 8783 4 chr2B.!!$R2 8782
1 TraesCS2B01G304200 chr2D 363975011 363983312 8301 True 1994.50 5160 92.2370 1 8783 6 chr2D.!!$R2 8782
2 TraesCS2B01G304200 chr2A 489960833 489970139 9306 True 1237.06 3635 93.1445 1 8783 10 chr2A.!!$R1 8782
3 TraesCS2B01G304200 chr6D 222734425 222735561 1136 False 1175.00 1175 85.3380 6598 7734 1 chr6D.!!$F1 1136
4 TraesCS2B01G304200 chr6D 222721172 222722718 1546 False 383.00 396 81.7935 1001 3367 2 chr6D.!!$F2 2366
5 TraesCS2B01G304200 chr6B 391095003 391096139 1136 False 1175.00 1175 85.3380 6598 7734 1 chr6B.!!$F1 1136
6 TraesCS2B01G304200 chr6B 391071567 391073005 1438 False 385.00 411 83.3745 1112 3367 2 chr6B.!!$F2 2255
7 TraesCS2B01G304200 chr6A 278552184 278553320 1136 True 1170.00 1170 85.2500 6598 7734 1 chr6A.!!$R1 1136
8 TraesCS2B01G304200 chr6A 278572279 278573718 1439 True 384.50 399 83.3970 1112 3367 2 chr6A.!!$R3 2255

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
256 265 0.178900 AAGGTTCTCCCGAGGTCCTT 60.179 55.000 12.32 12.32 37.22 3.36 F
1473 1484 0.110486 TTGGAAGAGGCAGTGGGTTC 59.890 55.000 0.00 0.00 0.00 3.62 F
2062 2189 0.249398 GTACTTGGCCGGACTGTGAT 59.751 55.000 9.82 0.00 0.00 3.06 F
2359 2499 0.336392 AGGAAATCCTGGGGAAAGCC 59.664 55.000 0.00 0.00 46.55 4.35 F
3526 3976 0.037590 TGCGGGGCTTGTAAATGAGT 59.962 50.000 0.00 0.00 0.00 3.41 F
3607 4057 0.313043 AGCATGAATAGCAATGCGGC 59.687 50.000 0.00 0.00 44.08 6.53 F
3685 4137 0.609957 CGGATACATGGGCATGCCAT 60.610 55.000 36.56 24.26 42.39 4.40 F
3904 4364 0.824759 AGACCCCACTTATCGTCAGC 59.175 55.000 0.00 0.00 0.00 4.26 F
4776 5252 1.617357 ACCAAGTACCGTGGAGAGTTC 59.383 52.381 17.88 0.00 39.62 3.01 F
5577 6435 0.032813 AGTATTTCCGGACGGAGGGA 60.033 55.000 13.64 4.95 46.06 4.20 F
5699 6557 0.115745 AAGTTGGGTAGACGAGGGGA 59.884 55.000 0.00 0.00 0.00 4.81 F
5884 6900 0.661187 GTGTCATTGCCTGCACAACG 60.661 55.000 0.00 0.00 34.23 4.10 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1902 2013 0.465097 CCGAATGGGAATGCAGCTCT 60.465 55.000 0.00 0.0 38.47 4.09 R
3104 3346 0.890683 GGCAAAAGGACACATGGGAG 59.109 55.000 0.00 0.0 0.00 4.30 R
3507 3957 0.037590 ACTCATTTACAAGCCCCGCA 59.962 50.000 0.00 0.0 0.00 5.69 R
3588 4038 0.313043 GCCGCATTGCTATTCATGCT 59.687 50.000 7.12 0.0 37.84 3.79 R
4600 5064 1.180907 TGCAACTGACAAAAGCCACA 58.819 45.000 0.00 0.0 0.00 4.17 R
5558 6416 0.032813 TCCCTCCGTCCGGAAATACT 60.033 55.000 5.23 0.0 44.66 2.12 R
5560 6418 0.032813 ACTCCCTCCGTCCGGAAATA 60.033 55.000 5.23 0.0 44.66 1.40 R
5562 6420 0.032813 ATACTCCCTCCGTCCGGAAA 60.033 55.000 5.23 0.0 44.66 3.13 R
5691 6549 0.680921 CACCAATGCAATCCCCTCGT 60.681 55.000 0.00 0.0 0.00 4.18 R
6634 7663 1.899142 GGCTGTAATTTGGGCCTTCAA 59.101 47.619 4.53 0.0 41.20 2.69 R
7098 8127 2.168496 TCTGTTAGTTGACCTCCCTCG 58.832 52.381 0.00 0.0 0.00 4.63 R
7822 8851 2.313643 TCTAGGTACCATCACCAGGACA 59.686 50.000 15.94 0.0 41.40 4.02 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
110 116 6.662755 TGAGGTAGTATTTCTTCGGTAGGTA 58.337 40.000 0.00 0.00 0.00 3.08
112 118 7.781693 TGAGGTAGTATTTCTTCGGTAGGTATT 59.218 37.037 0.00 0.00 0.00 1.89
113 119 8.175925 AGGTAGTATTTCTTCGGTAGGTATTC 57.824 38.462 0.00 0.00 0.00 1.75
114 120 7.232330 AGGTAGTATTTCTTCGGTAGGTATTCC 59.768 40.741 0.00 0.00 0.00 3.01
115 121 7.014615 GGTAGTATTTCTTCGGTAGGTATTCCA 59.985 40.741 0.00 0.00 35.89 3.53
197 206 5.466728 GTGAATTGCTAGGATTTCGCATCTA 59.533 40.000 20.69 0.70 33.15 1.98
198 207 5.698089 TGAATTGCTAGGATTTCGCATCTAG 59.302 40.000 12.40 0.00 33.15 2.43
199 208 3.667497 TGCTAGGATTTCGCATCTAGG 57.333 47.619 0.00 0.00 32.23 3.02
200 209 2.965831 TGCTAGGATTTCGCATCTAGGT 59.034 45.455 0.00 0.00 32.23 3.08
205 214 4.408276 AGGATTTCGCATCTAGGTAGCTA 58.592 43.478 0.99 0.99 0.00 3.32
248 257 2.264794 CGTCCCAAGGTTCTCCCG 59.735 66.667 0.00 0.00 38.74 5.14
256 265 0.178900 AAGGTTCTCCCGAGGTCCTT 60.179 55.000 12.32 12.32 37.22 3.36
424 433 0.903454 ATCCTGTTCCGTTCCCTCGT 60.903 55.000 0.00 0.00 0.00 4.18
437 446 1.219664 CCTCGTGTGGGCGGATTTA 59.780 57.895 0.00 0.00 0.00 1.40
450 459 3.243737 GGCGGATTTATGGATTGGGTTTC 60.244 47.826 0.00 0.00 0.00 2.78
472 481 1.525442 GTTCCGGGGATCGATTGGT 59.475 57.895 0.00 0.00 42.43 3.67
480 489 1.615919 GGGATCGATTGGTTGGTTGGT 60.616 52.381 0.00 0.00 0.00 3.67
481 490 2.167662 GGATCGATTGGTTGGTTGGTT 58.832 47.619 0.00 0.00 0.00 3.67
482 491 2.094752 GGATCGATTGGTTGGTTGGTTG 60.095 50.000 0.00 0.00 0.00 3.77
483 492 1.323412 TCGATTGGTTGGTTGGTTGG 58.677 50.000 0.00 0.00 0.00 3.77
527 536 2.163613 CTGCGAATCCTGTTTTTACCCC 59.836 50.000 0.00 0.00 0.00 4.95
572 581 1.668419 CGCTATTTTGGTAGCTGCCT 58.332 50.000 22.25 3.87 43.82 4.75
669 678 4.167268 GTCGAGCGGATTTAGATGGTATC 58.833 47.826 0.00 0.00 0.00 2.24
714 723 3.618594 CGTGTGGATAATCCTGTGTTGAG 59.381 47.826 0.00 0.00 37.46 3.02
720 729 4.567747 GGATAATCCTGTGTTGAGGTTGGT 60.568 45.833 0.00 0.00 34.36 3.67
856 865 5.722021 ATGGTTGGCGAATTCTTTTAACT 57.278 34.783 3.52 0.00 0.00 2.24
868 877 6.993175 ATTCTTTTAACTTCGCTTTTGAGC 57.007 33.333 0.00 0.00 0.00 4.26
869 878 5.751243 TCTTTTAACTTCGCTTTTGAGCT 57.249 34.783 0.00 0.00 0.00 4.09
997 1008 3.250040 CCTGTGGTTCTTTGGTTAGTTCG 59.750 47.826 0.00 0.00 0.00 3.95
1029 1040 1.277557 ACTCTGGTTCAGTCTGCCATC 59.722 52.381 0.00 0.00 32.61 3.51
1049 1060 1.736365 GCTCCTACCGCCTACAGGAC 61.736 65.000 0.00 0.00 34.72 3.85
1101 1112 1.801771 GCCACAATGTTACGCAGTACA 59.198 47.619 0.00 0.00 45.76 2.90
1245 1256 2.224769 TGGGTCAGGTTCAAGAATGGTC 60.225 50.000 0.00 0.00 0.00 4.02
1473 1484 0.110486 TTGGAAGAGGCAGTGGGTTC 59.890 55.000 0.00 0.00 0.00 3.62
1564 1575 8.130671 TCGCCAGCTAGGTATTAATTATTACT 57.869 34.615 14.18 6.28 40.61 2.24
1645 1657 9.982651 TCAGCTATTCTGTAATTATTACTGGAC 57.017 33.333 17.65 2.99 43.32 4.02
1687 1699 8.958119 TTTTATTTACCGATCAGCTATTCTGT 57.042 30.769 0.00 0.00 43.32 3.41
1692 1704 8.958119 TTTACCGATCAGCTATTCTGTAATTT 57.042 30.769 10.72 0.00 43.32 1.82
1693 1705 8.958119 TTACCGATCAGCTATTCTGTAATTTT 57.042 30.769 7.54 0.00 43.32 1.82
1694 1706 7.251704 ACCGATCAGCTATTCTGTAATTTTG 57.748 36.000 0.00 0.00 43.32 2.44
1695 1707 7.047891 ACCGATCAGCTATTCTGTAATTTTGA 58.952 34.615 0.00 0.00 43.32 2.69
1696 1708 7.716998 ACCGATCAGCTATTCTGTAATTTTGAT 59.283 33.333 0.00 0.00 43.32 2.57
1697 1709 8.226448 CCGATCAGCTATTCTGTAATTTTGATC 58.774 37.037 0.00 0.00 43.32 2.92
1769 1880 5.367945 ACCCTGTTCTGTTTTCTTAGTCA 57.632 39.130 0.00 0.00 0.00 3.41
1821 1932 5.181690 TGGTTCAGATAAGTGCACAAAAC 57.818 39.130 21.04 11.13 0.00 2.43
1827 1938 3.440173 AGATAAGTGCACAAAACATCCGG 59.560 43.478 21.04 0.00 0.00 5.14
1877 1988 5.067413 TGGTAGTCGAGGACAAGTTATCATC 59.933 44.000 0.00 0.00 34.60 2.92
1885 1996 5.880901 AGGACAAGTTATCATCAGGTGTTT 58.119 37.500 0.00 0.00 0.00 2.83
1890 2001 5.633830 AGTTATCATCAGGTGTTTTGCTG 57.366 39.130 0.00 0.00 0.00 4.41
1893 2004 1.133513 TCATCAGGTGTTTTGCTGGGT 60.134 47.619 0.00 0.00 0.00 4.51
1902 2013 4.020543 GTGTTTTGCTGGGTATGGGAATA 58.979 43.478 0.00 0.00 0.00 1.75
1940 2051 0.600255 GTGACGAGTGTGGGGAACTG 60.600 60.000 0.00 0.00 0.00 3.16
1949 2060 1.133730 TGTGGGGAACTGGTGGTTAAC 60.134 52.381 0.00 0.00 38.41 2.01
1987 2098 3.904571 TGAAGCAAGCACATGAATGTTC 58.095 40.909 0.00 0.00 39.39 3.18
1989 2100 1.200716 AGCAAGCACATGAATGTTCCG 59.799 47.619 0.00 0.00 39.39 4.30
2008 2135 1.538666 CCATTCCCATCCCCTGACC 59.461 63.158 0.00 0.00 0.00 4.02
2016 2143 0.763652 CATCCCCTGACCATCTGAGG 59.236 60.000 0.00 0.00 0.00 3.86
2057 2184 2.154567 TCTATGTACTTGGCCGGACT 57.845 50.000 9.82 0.00 0.00 3.85
2062 2189 0.249398 GTACTTGGCCGGACTGTGAT 59.751 55.000 9.82 0.00 0.00 3.06
2068 2195 1.003839 GCCGGACTGTGATTGACCA 60.004 57.895 5.05 0.00 0.00 4.02
2070 2197 1.656652 CCGGACTGTGATTGACCATC 58.343 55.000 0.00 0.00 0.00 3.51
2071 2198 1.208052 CCGGACTGTGATTGACCATCT 59.792 52.381 0.00 0.00 32.34 2.90
2072 2199 2.274437 CGGACTGTGATTGACCATCTG 58.726 52.381 0.00 0.00 32.34 2.90
2073 2200 2.094026 CGGACTGTGATTGACCATCTGA 60.094 50.000 0.00 0.00 32.34 3.27
2074 2201 3.529533 GGACTGTGATTGACCATCTGAG 58.470 50.000 0.00 0.00 32.34 3.35
2075 2202 3.529533 GACTGTGATTGACCATCTGAGG 58.470 50.000 0.00 0.00 32.34 3.86
2076 2203 2.286872 CTGTGATTGACCATCTGAGGC 58.713 52.381 0.00 0.00 32.34 4.70
2077 2204 1.911357 TGTGATTGACCATCTGAGGCT 59.089 47.619 0.00 0.00 32.34 4.58
2078 2205 3.106827 TGTGATTGACCATCTGAGGCTA 58.893 45.455 0.00 0.00 32.34 3.93
2079 2206 3.133542 TGTGATTGACCATCTGAGGCTAG 59.866 47.826 0.00 0.00 32.34 3.42
2080 2207 2.702478 TGATTGACCATCTGAGGCTAGG 59.298 50.000 0.00 0.00 32.34 3.02
2081 2208 0.833287 TTGACCATCTGAGGCTAGGC 59.167 55.000 8.55 8.55 0.00 3.93
2225 2361 9.341899 GGTTTGATCACTAAACATGTACAATTC 57.658 33.333 0.00 0.00 39.24 2.17
2226 2362 9.051027 GTTTGATCACTAAACATGTACAATTCG 57.949 33.333 0.00 0.00 37.82 3.34
2227 2363 7.899178 TGATCACTAAACATGTACAATTCGT 57.101 32.000 0.00 0.00 0.00 3.85
2228 2364 8.989653 TGATCACTAAACATGTACAATTCGTA 57.010 30.769 0.00 0.00 0.00 3.43
2229 2365 9.083080 TGATCACTAAACATGTACAATTCGTAG 57.917 33.333 0.00 1.32 0.00 3.51
2230 2366 8.997621 ATCACTAAACATGTACAATTCGTAGT 57.002 30.769 0.00 1.95 0.00 2.73
2232 2368 9.563898 TCACTAAACATGTACAATTCGTAGTAG 57.436 33.333 0.00 4.06 0.00 2.57
2243 2381 7.642082 ACAATTCGTAGTAGGTGACTAATCT 57.358 36.000 0.00 0.00 46.54 2.40
2292 2430 1.277273 CAGGTCCTGTGCAGAATGAGA 59.723 52.381 11.09 0.00 39.69 3.27
2310 2448 9.396022 AGAATGAGACTTTGTTCTTCTTTTACA 57.604 29.630 0.00 0.00 0.00 2.41
2345 2485 1.271856 TAGGTGATCGTGGCAGGAAA 58.728 50.000 14.47 2.94 0.00 3.13
2346 2486 0.620556 AGGTGATCGTGGCAGGAAAT 59.379 50.000 14.47 0.00 0.00 2.17
2359 2499 0.336392 AGGAAATCCTGGGGAAAGCC 59.664 55.000 0.00 0.00 46.55 4.35
2418 2560 0.461870 TCGACCTTCATTGCCCATCG 60.462 55.000 0.00 0.00 0.00 3.84
2420 2562 1.750193 GACCTTCATTGCCCATCGAA 58.250 50.000 0.00 0.00 0.00 3.71
2600 2742 8.669946 TCACTAAATCACTATTGTGTTGTTCA 57.330 30.769 7.18 0.00 44.14 3.18
2602 2744 9.897744 CACTAAATCACTATTGTGTTGTTCATT 57.102 29.630 7.18 0.00 44.14 2.57
2681 2838 7.810282 ACTATATCACATCACTATTGCGTCTTC 59.190 37.037 0.00 0.00 0.00 2.87
2723 2880 9.334693 CTTGAGACTATTGTTTGTTCAATAAGC 57.665 33.333 0.00 0.00 39.01 3.09
2829 3031 0.834612 TTCGTGAGGGTGAAGGTGTT 59.165 50.000 0.00 0.00 0.00 3.32
2962 3204 9.241919 TGTCCAGACAATGAATATTTTACATGT 57.758 29.630 2.69 2.69 38.56 3.21
3452 3902 6.798315 TGAATTGCAATGTGGGTAATTTTG 57.202 33.333 13.82 0.00 31.98 2.44
3463 3913 6.821388 TGTGGGTAATTTTGTTTTGCTATGT 58.179 32.000 0.00 0.00 0.00 2.29
3483 3933 6.715347 ATGTAGCACTGATACTGATGTGTA 57.285 37.500 6.05 0.00 33.44 2.90
3486 3936 5.859205 AGCACTGATACTGATGTGTATGA 57.141 39.130 0.00 0.00 33.74 2.15
3487 3937 5.840715 AGCACTGATACTGATGTGTATGAG 58.159 41.667 0.00 0.00 39.12 2.90
3488 3938 5.595952 AGCACTGATACTGATGTGTATGAGA 59.404 40.000 7.82 0.00 36.64 3.27
3489 3939 5.919707 GCACTGATACTGATGTGTATGAGAG 59.080 44.000 7.82 2.40 36.64 3.20
3490 3940 6.460814 GCACTGATACTGATGTGTATGAGAGT 60.461 42.308 7.82 0.00 36.64 3.24
3491 3941 7.255277 GCACTGATACTGATGTGTATGAGAGTA 60.255 40.741 7.82 0.00 36.64 2.59
3492 3942 8.791675 CACTGATACTGATGTGTATGAGAGTAT 58.208 37.037 7.82 0.00 36.64 2.12
3493 3943 9.008965 ACTGATACTGATGTGTATGAGAGTATC 57.991 37.037 0.00 0.00 41.05 2.24
3494 3944 8.341892 TGATACTGATGTGTATGAGAGTATCC 57.658 38.462 0.00 0.00 40.42 2.59
3495 3945 7.944554 TGATACTGATGTGTATGAGAGTATCCA 59.055 37.037 0.00 0.00 40.42 3.41
3496 3946 8.891985 ATACTGATGTGTATGAGAGTATCCAT 57.108 34.615 0.00 0.00 31.20 3.41
3497 3947 9.981460 ATACTGATGTGTATGAGAGTATCCATA 57.019 33.333 0.00 0.00 31.20 2.74
3498 3948 8.891985 ACTGATGTGTATGAGAGTATCCATAT 57.108 34.615 0.00 0.00 33.18 1.78
3499 3949 8.965819 ACTGATGTGTATGAGAGTATCCATATC 58.034 37.037 0.00 0.00 33.18 1.63
3500 3950 7.989826 TGATGTGTATGAGAGTATCCATATCG 58.010 38.462 0.00 0.00 33.18 2.92
3501 3951 6.759497 TGTGTATGAGAGTATCCATATCGG 57.241 41.667 0.00 0.00 33.18 4.18
3502 3952 5.652452 TGTGTATGAGAGTATCCATATCGGG 59.348 44.000 0.00 0.00 33.18 5.14
3503 3953 5.067936 GTGTATGAGAGTATCCATATCGGGG 59.932 48.000 0.00 0.00 33.18 5.73
3504 3954 3.827817 TGAGAGTATCCATATCGGGGT 57.172 47.619 0.00 0.00 33.66 4.95
3505 3955 3.431415 TGAGAGTATCCATATCGGGGTG 58.569 50.000 0.00 0.00 33.66 4.61
3506 3956 3.075432 TGAGAGTATCCATATCGGGGTGA 59.925 47.826 0.00 0.00 33.66 4.02
3507 3957 4.264397 TGAGAGTATCCATATCGGGGTGAT 60.264 45.833 0.00 0.00 37.08 3.06
3508 3958 4.026744 AGAGTATCCATATCGGGGTGATG 58.973 47.826 0.00 0.00 34.52 3.07
3509 3959 2.501723 AGTATCCATATCGGGGTGATGC 59.498 50.000 0.00 0.00 37.99 3.91
3510 3960 0.250234 ATCCATATCGGGGTGATGCG 59.750 55.000 0.00 0.00 37.99 4.73
3511 3961 1.375908 CCATATCGGGGTGATGCGG 60.376 63.158 0.00 0.00 37.99 5.69
3512 3962 1.375908 CATATCGGGGTGATGCGGG 60.376 63.158 0.00 0.00 37.99 6.13
3513 3963 2.592993 ATATCGGGGTGATGCGGGG 61.593 63.158 0.00 0.00 37.99 5.73
3518 3968 4.740822 GGGTGATGCGGGGCTTGT 62.741 66.667 0.00 0.00 0.00 3.16
3519 3969 2.270850 GGTGATGCGGGGCTTGTA 59.729 61.111 0.00 0.00 0.00 2.41
3520 3970 1.377987 GGTGATGCGGGGCTTGTAA 60.378 57.895 0.00 0.00 0.00 2.41
3521 3971 0.963355 GGTGATGCGGGGCTTGTAAA 60.963 55.000 0.00 0.00 0.00 2.01
3522 3972 1.102978 GTGATGCGGGGCTTGTAAAT 58.897 50.000 0.00 0.00 0.00 1.40
3523 3973 1.102154 TGATGCGGGGCTTGTAAATG 58.898 50.000 0.00 0.00 0.00 2.32
3524 3974 1.340502 TGATGCGGGGCTTGTAAATGA 60.341 47.619 0.00 0.00 0.00 2.57
3525 3975 1.334869 GATGCGGGGCTTGTAAATGAG 59.665 52.381 0.00 0.00 0.00 2.90
3526 3976 0.037590 TGCGGGGCTTGTAAATGAGT 59.962 50.000 0.00 0.00 0.00 3.41
3527 3977 0.451783 GCGGGGCTTGTAAATGAGTG 59.548 55.000 0.00 0.00 0.00 3.51
3528 3978 1.821216 CGGGGCTTGTAAATGAGTGT 58.179 50.000 0.00 0.00 0.00 3.55
3529 3979 2.937873 GCGGGGCTTGTAAATGAGTGTA 60.938 50.000 0.00 0.00 0.00 2.90
3530 3980 3.541632 CGGGGCTTGTAAATGAGTGTAT 58.458 45.455 0.00 0.00 0.00 2.29
3531 3981 3.312421 CGGGGCTTGTAAATGAGTGTATG 59.688 47.826 0.00 0.00 0.00 2.39
3532 3982 3.632145 GGGGCTTGTAAATGAGTGTATGG 59.368 47.826 0.00 0.00 0.00 2.74
3533 3983 3.632145 GGGCTTGTAAATGAGTGTATGGG 59.368 47.826 0.00 0.00 0.00 4.00
3534 3984 4.523083 GGCTTGTAAATGAGTGTATGGGA 58.477 43.478 0.00 0.00 0.00 4.37
3535 3985 5.133221 GGCTTGTAAATGAGTGTATGGGAT 58.867 41.667 0.00 0.00 0.00 3.85
3536 3986 6.296026 GGCTTGTAAATGAGTGTATGGGATA 58.704 40.000 0.00 0.00 0.00 2.59
3537 3987 6.204882 GGCTTGTAAATGAGTGTATGGGATAC 59.795 42.308 0.00 0.00 36.29 2.24
3555 4005 6.268825 GGATACCGATATGTGTATGAGTGT 57.731 41.667 0.00 0.00 0.00 3.55
3556 4006 7.387119 GGATACCGATATGTGTATGAGTGTA 57.613 40.000 0.00 0.00 0.00 2.90
3557 4007 7.997482 GGATACCGATATGTGTATGAGTGTAT 58.003 38.462 0.00 0.00 0.00 2.29
3558 4008 8.129840 GGATACCGATATGTGTATGAGTGTATC 58.870 40.741 0.00 0.00 33.42 2.24
3559 4009 6.268825 ACCGATATGTGTATGAGTGTATCC 57.731 41.667 0.00 0.00 0.00 2.59
3560 4010 5.773176 ACCGATATGTGTATGAGTGTATCCA 59.227 40.000 0.00 0.00 0.00 3.41
3561 4011 6.093404 CCGATATGTGTATGAGTGTATCCAC 58.907 44.000 0.00 0.00 42.17 4.02
3562 4012 6.294508 CCGATATGTGTATGAGTGTATCCACA 60.295 42.308 0.00 0.00 44.39 4.17
3563 4013 6.803807 CGATATGTGTATGAGTGTATCCACAG 59.196 42.308 0.00 0.00 44.39 3.66
3564 4014 5.939764 ATGTGTATGAGTGTATCCACAGT 57.060 39.130 0.00 0.00 44.39 3.55
3565 4015 5.738619 TGTGTATGAGTGTATCCACAGTT 57.261 39.130 0.00 0.00 44.39 3.16
3566 4016 6.109156 TGTGTATGAGTGTATCCACAGTTT 57.891 37.500 0.00 0.00 44.39 2.66
3567 4017 7.234661 TGTGTATGAGTGTATCCACAGTTTA 57.765 36.000 0.00 0.00 44.39 2.01
3568 4018 7.847096 TGTGTATGAGTGTATCCACAGTTTAT 58.153 34.615 0.00 0.00 44.39 1.40
3569 4019 8.318412 TGTGTATGAGTGTATCCACAGTTTATT 58.682 33.333 0.00 0.00 44.39 1.40
3570 4020 9.162764 GTGTATGAGTGTATCCACAGTTTATTT 57.837 33.333 0.00 0.00 44.39 1.40
3571 4021 9.733556 TGTATGAGTGTATCCACAGTTTATTTT 57.266 29.630 0.00 0.00 44.39 1.82
3572 4022 9.988350 GTATGAGTGTATCCACAGTTTATTTTG 57.012 33.333 0.00 0.00 44.39 2.44
3573 4023 8.635765 ATGAGTGTATCCACAGTTTATTTTGT 57.364 30.769 0.00 0.00 44.39 2.83
3574 4024 7.870826 TGAGTGTATCCACAGTTTATTTTGTG 58.129 34.615 0.00 0.00 44.39 3.33
3575 4025 6.677913 AGTGTATCCACAGTTTATTTTGTGC 58.322 36.000 0.00 0.00 44.39 4.57
3576 4026 6.490040 AGTGTATCCACAGTTTATTTTGTGCT 59.510 34.615 0.00 0.00 44.39 4.40
3577 4027 7.014230 AGTGTATCCACAGTTTATTTTGTGCTT 59.986 33.333 0.00 0.00 44.39 3.91
3578 4028 7.114811 GTGTATCCACAGTTTATTTTGTGCTTG 59.885 37.037 0.00 0.00 42.52 4.01
3579 4029 5.590530 TCCACAGTTTATTTTGTGCTTGT 57.409 34.783 0.00 0.00 42.52 3.16
3580 4030 6.701145 TCCACAGTTTATTTTGTGCTTGTA 57.299 33.333 0.00 0.00 42.52 2.41
3581 4031 7.101652 TCCACAGTTTATTTTGTGCTTGTAA 57.898 32.000 0.00 0.00 42.52 2.41
3582 4032 7.548097 TCCACAGTTTATTTTGTGCTTGTAAA 58.452 30.769 0.00 0.00 42.52 2.01
3583 4033 8.200792 TCCACAGTTTATTTTGTGCTTGTAAAT 58.799 29.630 0.00 0.00 42.52 1.40
3584 4034 8.274939 CCACAGTTTATTTTGTGCTTGTAAATG 58.725 33.333 0.00 0.00 42.52 2.32
3585 4035 9.029243 CACAGTTTATTTTGTGCTTGTAAATGA 57.971 29.630 0.00 0.00 38.35 2.57
3586 4036 9.248291 ACAGTTTATTTTGTGCTTGTAAATGAG 57.752 29.630 0.00 0.00 0.00 2.90
3587 4037 9.248291 CAGTTTATTTTGTGCTTGTAAATGAGT 57.752 29.630 0.00 0.00 0.00 3.41
3590 4040 8.964420 TTATTTTGTGCTTGTAAATGAGTAGC 57.036 30.769 0.00 0.00 0.00 3.58
3591 4041 6.384258 TTTTGTGCTTGTAAATGAGTAGCA 57.616 33.333 0.00 0.00 39.35 3.49
3592 4042 6.573664 TTTGTGCTTGTAAATGAGTAGCAT 57.426 33.333 0.00 0.00 43.01 3.79
3593 4043 5.550232 TGTGCTTGTAAATGAGTAGCATG 57.450 39.130 0.00 0.00 43.01 4.06
3594 4044 5.244755 TGTGCTTGTAAATGAGTAGCATGA 58.755 37.500 0.00 0.00 43.01 3.07
3595 4045 5.704978 TGTGCTTGTAAATGAGTAGCATGAA 59.295 36.000 0.00 0.00 43.01 2.57
3596 4046 6.375174 TGTGCTTGTAAATGAGTAGCATGAAT 59.625 34.615 0.00 0.00 43.01 2.57
3597 4047 7.552330 TGTGCTTGTAAATGAGTAGCATGAATA 59.448 33.333 0.00 0.00 43.01 1.75
3598 4048 8.066595 GTGCTTGTAAATGAGTAGCATGAATAG 58.933 37.037 0.00 0.00 43.01 1.73
3599 4049 7.074502 GCTTGTAAATGAGTAGCATGAATAGC 58.925 38.462 0.00 0.00 37.28 2.97
3600 4050 7.254898 GCTTGTAAATGAGTAGCATGAATAGCA 60.255 37.037 0.00 0.00 37.28 3.49
3601 4051 8.504812 TTGTAAATGAGTAGCATGAATAGCAA 57.495 30.769 0.00 0.00 37.28 3.91
3602 4052 8.681486 TGTAAATGAGTAGCATGAATAGCAAT 57.319 30.769 0.00 0.00 37.28 3.56
3603 4053 8.562052 TGTAAATGAGTAGCATGAATAGCAATG 58.438 33.333 0.00 0.00 37.28 2.82
3604 4054 5.624344 ATGAGTAGCATGAATAGCAATGC 57.376 39.130 0.00 0.00 40.09 3.56
3605 4055 3.495753 TGAGTAGCATGAATAGCAATGCG 59.504 43.478 0.00 0.00 44.08 4.73
3606 4056 2.810274 AGTAGCATGAATAGCAATGCGG 59.190 45.455 0.00 0.00 44.08 5.69
3607 4057 0.313043 AGCATGAATAGCAATGCGGC 59.687 50.000 0.00 0.00 44.08 6.53
3660 4112 3.755378 GTGTACGAGTATCCATATCGGGT 59.245 47.826 0.00 0.00 40.67 5.28
3663 4115 2.029290 ACGAGTATCCATATCGGGTTGC 60.029 50.000 0.00 0.00 40.67 4.17
3685 4137 0.609957 CGGATACATGGGCATGCCAT 60.610 55.000 36.56 24.26 42.39 4.40
3686 4138 1.636148 GGATACATGGGCATGCCATT 58.364 50.000 36.56 21.10 42.39 3.16
3718 4170 5.929697 AGTTGCCAATACATCGATACATG 57.070 39.130 0.00 0.00 0.00 3.21
3726 4179 8.027189 GCCAATACATCGATACATGAACTACTA 58.973 37.037 0.00 0.00 0.00 1.82
3728 4181 9.893305 CAATACATCGATACATGAACTACTACA 57.107 33.333 0.00 0.00 0.00 2.74
3826 4284 2.099427 GGTACGAGACATGGGAGAGTTC 59.901 54.545 0.00 0.00 0.00 3.01
3857 4315 8.985315 ATGACGGATATGATAAAATATGCCAT 57.015 30.769 0.00 0.00 29.57 4.40
3870 4330 7.912778 AAAATATGCCATGTAGGTATTTGGT 57.087 32.000 0.00 0.00 40.09 3.67
3874 4334 4.523083 TGCCATGTAGGTATTTGGTCTTC 58.477 43.478 0.00 0.00 40.61 2.87
3900 4360 0.907704 TGCCAGACCCCACTTATCGT 60.908 55.000 0.00 0.00 0.00 3.73
3903 4363 1.137086 CCAGACCCCACTTATCGTCAG 59.863 57.143 0.00 0.00 0.00 3.51
3904 4364 0.824759 AGACCCCACTTATCGTCAGC 59.175 55.000 0.00 0.00 0.00 4.26
4460 4923 7.724305 TCATGTACTGGTGTTAAGAGTTTTC 57.276 36.000 0.00 0.00 0.00 2.29
4572 5036 7.665559 AGCCTTCAGTAATTAAGTGTTGATGAA 59.334 33.333 0.00 0.00 0.00 2.57
4616 5092 6.403866 TGATAAATGTGGCTTTTGTCAGTT 57.596 33.333 3.95 0.00 33.07 3.16
4776 5252 1.617357 ACCAAGTACCGTGGAGAGTTC 59.383 52.381 17.88 0.00 39.62 3.01
4964 5440 5.221682 TGTGCCTGATTTCAAATTCCATTGT 60.222 36.000 0.00 0.00 0.00 2.71
5050 5904 1.742268 GCTGGATCCAGAAAGCAGTTC 59.258 52.381 40.29 18.42 46.30 3.01
5114 5968 5.047306 GCTGCCCCTAGTTTTAACATTTCTT 60.047 40.000 0.00 0.00 0.00 2.52
5280 6134 5.063204 AGAGGACTTCGTGAGAGATATGAG 58.937 45.833 0.00 0.00 43.69 2.90
5370 6224 3.130869 TCAGGTTTGCATTGCATCATACC 59.869 43.478 12.95 16.12 38.76 2.73
5471 6329 9.643735 AGGTATTAGCTGTATATATGTACTCCC 57.356 37.037 10.53 0.51 0.00 4.30
5472 6330 9.643735 GGTATTAGCTGTATATATGTACTCCCT 57.356 37.037 10.53 6.78 0.00 4.20
5475 6333 8.809468 TTAGCTGTATATATGTACTCCCTCAG 57.191 38.462 10.53 0.91 0.00 3.35
5476 6334 6.795590 AGCTGTATATATGTACTCCCTCAGT 58.204 40.000 10.53 0.00 39.41 3.41
5477 6335 6.887545 AGCTGTATATATGTACTCCCTCAGTC 59.112 42.308 10.53 0.00 36.43 3.51
5478 6336 6.095720 GCTGTATATATGTACTCCCTCAGTCC 59.904 46.154 10.53 0.00 36.43 3.85
5479 6337 7.344599 TGTATATATGTACTCCCTCAGTCCT 57.655 40.000 10.53 0.00 36.43 3.85
5480 6338 7.175797 TGTATATATGTACTCCCTCAGTCCTG 58.824 42.308 10.53 0.00 36.43 3.86
5481 6339 4.816048 ATATGTACTCCCTCAGTCCTGA 57.184 45.455 0.00 0.00 36.43 3.86
5482 6340 2.992847 TGTACTCCCTCAGTCCTGAA 57.007 50.000 0.00 0.00 39.39 3.02
5483 6341 3.254093 TGTACTCCCTCAGTCCTGAAA 57.746 47.619 0.00 0.00 39.39 2.69
5484 6342 3.791320 TGTACTCCCTCAGTCCTGAAAT 58.209 45.455 0.00 0.00 39.39 2.17
5485 6343 4.942944 TGTACTCCCTCAGTCCTGAAATA 58.057 43.478 0.00 0.00 39.39 1.40
5486 6344 4.710375 TGTACTCCCTCAGTCCTGAAATAC 59.290 45.833 0.00 0.00 39.39 1.89
5487 6345 4.067944 ACTCCCTCAGTCCTGAAATACT 57.932 45.455 0.00 0.00 39.39 2.12
5488 6346 4.430441 ACTCCCTCAGTCCTGAAATACTT 58.570 43.478 0.00 0.00 39.39 2.24
5489 6347 4.223923 ACTCCCTCAGTCCTGAAATACTTG 59.776 45.833 0.00 0.00 39.39 3.16
5490 6348 4.168101 TCCCTCAGTCCTGAAATACTTGT 58.832 43.478 0.00 0.00 39.39 3.16
5491 6349 4.223032 TCCCTCAGTCCTGAAATACTTGTC 59.777 45.833 0.00 0.00 39.39 3.18
5492 6350 4.177026 CCTCAGTCCTGAAATACTTGTCG 58.823 47.826 0.00 0.00 39.39 4.35
5493 6351 4.177026 CTCAGTCCTGAAATACTTGTCGG 58.823 47.826 0.00 0.00 39.39 4.79
5494 6352 3.830178 TCAGTCCTGAAATACTTGTCGGA 59.170 43.478 0.00 0.00 36.53 4.55
5495 6353 4.082190 TCAGTCCTGAAATACTTGTCGGAG 60.082 45.833 0.00 0.00 36.53 4.63
5496 6354 4.082190 CAGTCCTGAAATACTTGTCGGAGA 60.082 45.833 0.00 0.00 0.00 3.71
5497 6355 4.527038 AGTCCTGAAATACTTGTCGGAGAA 59.473 41.667 0.00 0.00 39.69 2.87
5498 6356 5.011738 AGTCCTGAAATACTTGTCGGAGAAA 59.988 40.000 0.00 0.00 39.69 2.52
5499 6357 5.875359 GTCCTGAAATACTTGTCGGAGAAAT 59.125 40.000 0.00 0.00 39.69 2.17
5500 6358 7.039882 GTCCTGAAATACTTGTCGGAGAAATA 58.960 38.462 0.00 0.00 39.69 1.40
5501 6359 7.548075 GTCCTGAAATACTTGTCGGAGAAATAA 59.452 37.037 0.00 0.00 39.69 1.40
5502 6360 8.098286 TCCTGAAATACTTGTCGGAGAAATAAA 58.902 33.333 0.00 0.00 39.69 1.40
5503 6361 8.893727 CCTGAAATACTTGTCGGAGAAATAAAT 58.106 33.333 0.00 0.00 39.69 1.40
5511 6369 9.855021 ACTTGTCGGAGAAATAAATTAAATTGG 57.145 29.630 0.00 0.00 39.69 3.16
5552 6410 9.535878 AAAATACGTCTAGATTCATCCTTTCTC 57.464 33.333 0.00 0.00 0.00 2.87
5553 6411 5.523438 ACGTCTAGATTCATCCTTTCTCC 57.477 43.478 0.00 0.00 0.00 3.71
5554 6412 4.036971 ACGTCTAGATTCATCCTTTCTCCG 59.963 45.833 0.00 0.00 0.00 4.63
5555 6413 4.276183 CGTCTAGATTCATCCTTTCTCCGA 59.724 45.833 0.00 0.00 0.00 4.55
5556 6414 5.525199 GTCTAGATTCATCCTTTCTCCGAC 58.475 45.833 0.00 0.00 0.00 4.79
5557 6415 5.067936 GTCTAGATTCATCCTTTCTCCGACA 59.932 44.000 0.00 0.00 0.00 4.35
5558 6416 4.826274 AGATTCATCCTTTCTCCGACAA 57.174 40.909 0.00 0.00 0.00 3.18
5559 6417 4.764172 AGATTCATCCTTTCTCCGACAAG 58.236 43.478 0.00 0.00 0.00 3.16
5560 6418 4.223923 AGATTCATCCTTTCTCCGACAAGT 59.776 41.667 0.00 0.00 0.00 3.16
5561 6419 5.422331 AGATTCATCCTTTCTCCGACAAGTA 59.578 40.000 0.00 0.00 0.00 2.24
5562 6420 5.677319 TTCATCCTTTCTCCGACAAGTAT 57.323 39.130 0.00 0.00 0.00 2.12
5563 6421 5.677319 TCATCCTTTCTCCGACAAGTATT 57.323 39.130 0.00 0.00 0.00 1.89
5564 6422 6.049955 TCATCCTTTCTCCGACAAGTATTT 57.950 37.500 0.00 0.00 0.00 1.40
5565 6423 6.106673 TCATCCTTTCTCCGACAAGTATTTC 58.893 40.000 0.00 0.00 0.00 2.17
5566 6424 4.828829 TCCTTTCTCCGACAAGTATTTCC 58.171 43.478 0.00 0.00 0.00 3.13
5567 6425 3.617263 CCTTTCTCCGACAAGTATTTCCG 59.383 47.826 0.00 0.00 0.00 4.30
5568 6426 2.953466 TCTCCGACAAGTATTTCCGG 57.047 50.000 0.00 0.00 41.36 5.14
5569 6427 2.449464 TCTCCGACAAGTATTTCCGGA 58.551 47.619 0.00 0.00 45.74 5.14
5570 6428 2.165030 TCTCCGACAAGTATTTCCGGAC 59.835 50.000 1.83 0.00 43.47 4.79
5571 6429 1.135315 TCCGACAAGTATTTCCGGACG 60.135 52.381 1.83 0.00 43.47 4.79
5572 6430 1.274596 CGACAAGTATTTCCGGACGG 58.725 55.000 1.83 3.96 0.00 4.79
5573 6431 1.135315 CGACAAGTATTTCCGGACGGA 60.135 52.381 1.83 9.76 43.52 4.69
5574 6432 2.537401 GACAAGTATTTCCGGACGGAG 58.463 52.381 13.64 3.15 46.06 4.63
5575 6433 1.206371 ACAAGTATTTCCGGACGGAGG 59.794 52.381 13.64 0.00 46.06 4.30
5576 6434 0.828677 AAGTATTTCCGGACGGAGGG 59.171 55.000 13.64 0.00 46.06 4.30
5577 6435 0.032813 AGTATTTCCGGACGGAGGGA 60.033 55.000 13.64 4.95 46.06 4.20
5598 6456 9.209175 GAGGGAGTATAATATTGTGAATGTGTC 57.791 37.037 0.00 0.00 0.00 3.67
5640 6498 5.004345 GTGGTTTTGTTGTCTGAATTGTTCG 59.996 40.000 0.00 0.00 0.00 3.95
5691 6549 8.395605 ACCTTTTTATTGGATAAGTTGGGTAGA 58.604 33.333 0.00 0.00 0.00 2.59
5699 6557 0.115745 AAGTTGGGTAGACGAGGGGA 59.884 55.000 0.00 0.00 0.00 4.81
5765 6623 6.667848 AGGGTTAATTATACTGGCTTTTGCTT 59.332 34.615 0.00 0.00 46.54 3.91
5767 6625 8.135529 GGGTTAATTATACTGGCTTTTGCTTAG 58.864 37.037 0.00 0.00 46.54 2.18
5796 6654 2.191128 GTGCTTCACACTCCCATTCT 57.809 50.000 0.00 0.00 46.41 2.40
5813 6671 6.070995 TCCCATTCTTCTAGACTTTCGCTAAA 60.071 38.462 0.00 0.00 0.00 1.85
5827 6685 7.235430 CTTTCGCTAAAAGTGTTATAGGAGG 57.765 40.000 1.41 0.00 39.68 4.30
5828 6686 5.927281 TCGCTAAAAGTGTTATAGGAGGT 57.073 39.130 0.00 0.00 0.00 3.85
5829 6687 7.408756 TTCGCTAAAAGTGTTATAGGAGGTA 57.591 36.000 0.00 0.00 0.00 3.08
5863 6879 3.871594 CCGTTTCACCCTTAATCTGCTAG 59.128 47.826 0.00 0.00 0.00 3.42
5874 6890 2.338577 ATCTGCTAGGGTGTCATTGC 57.661 50.000 0.00 0.00 0.00 3.56
5884 6900 0.661187 GTGTCATTGCCTGCACAACG 60.661 55.000 0.00 0.00 34.23 4.10
5935 6951 9.520515 ACTGTAATTTCTTGTTATCCTTGACAT 57.479 29.630 0.00 0.00 0.00 3.06
5956 6972 3.701205 TGGTTGACTCTACACATGCAT 57.299 42.857 0.00 0.00 0.00 3.96
5977 6993 5.339530 GCATGGTGATTATTAGCCCTCCTAT 60.340 44.000 0.00 0.00 0.00 2.57
5990 7006 8.924511 TTAGCCCTCCTATAATGAAAATCTTG 57.075 34.615 0.00 0.00 0.00 3.02
6232 7248 1.551908 CCCAGAGAGCCTGCTTCACT 61.552 60.000 0.00 0.00 41.57 3.41
6254 7270 6.093357 CACTGCCTTGTTTTTGTTTAACCATT 59.907 34.615 0.00 0.00 0.00 3.16
6431 7460 6.538742 TGCTTTAGTAGGATGCTAATGTTGTC 59.461 38.462 4.31 0.00 42.79 3.18
6434 7463 8.492673 TTTAGTAGGATGCTAATGTTGTCTTG 57.507 34.615 4.31 0.00 42.79 3.02
6435 7464 5.431765 AGTAGGATGCTAATGTTGTCTTGG 58.568 41.667 0.00 0.00 0.00 3.61
6534 7563 2.890945 GCCAGCCTTTTCTTCCTTGTTA 59.109 45.455 0.00 0.00 0.00 2.41
6548 7577 8.856153 TCTTCCTTGTTATGTTTATGCAACTA 57.144 30.769 0.00 0.00 36.21 2.24
6634 7663 5.941555 ATTAAGAGACGAGGAAATGGAGT 57.058 39.130 0.00 0.00 0.00 3.85
6831 7860 5.402054 AGATGGAAGAGACTCTCCATACT 57.598 43.478 24.58 20.76 42.43 2.12
6843 7872 5.141182 ACTCTCCATACTCGTATCATTGGT 58.859 41.667 0.00 0.00 0.00 3.67
7098 8127 2.026636 TCCAGGTTATGTTGGCTACACC 60.027 50.000 3.38 1.47 40.19 4.16
7251 8280 1.228657 GCAAGGGACGGACAGTTGAC 61.229 60.000 0.00 0.00 0.00 3.18
7263 8292 4.192317 GGACAGTTGACTTCAAGAACACT 58.808 43.478 0.00 0.00 36.39 3.55
7267 8296 3.873952 AGTTGACTTCAAGAACACTCTGC 59.126 43.478 0.00 0.00 36.39 4.26
7413 8442 0.326595 TGAAGCAGTATTTCCGGCCA 59.673 50.000 2.24 0.00 0.00 5.36
7572 8601 1.201424 AGTTCCGGGATAGGGTTGTC 58.799 55.000 0.00 0.00 0.00 3.18
7822 8851 6.640518 TCTTATTTCGTTATCTCAGCTTGGT 58.359 36.000 0.00 0.00 0.00 3.67
7883 8912 6.672266 TTCAGTTATGTGTTCTCCTCTTCT 57.328 37.500 0.00 0.00 0.00 2.85
8063 9098 4.122776 TGCTCTGTTTCTGAAGAACAGTC 58.877 43.478 17.31 12.60 45.86 3.51
8101 9136 4.994852 CCTGCAGTTACTTGCTTTGTACTA 59.005 41.667 13.81 0.00 44.38 1.82
8105 9140 6.590292 TGCAGTTACTTGCTTTGTACTATCTC 59.410 38.462 7.91 0.00 44.38 2.75
8107 9142 6.253727 CAGTTACTTGCTTTGTACTATCTCCG 59.746 42.308 0.00 0.00 0.00 4.63
8109 9144 4.745649 ACTTGCTTTGTACTATCTCCGTC 58.254 43.478 0.00 0.00 0.00 4.79
8110 9145 4.463186 ACTTGCTTTGTACTATCTCCGTCT 59.537 41.667 0.00 0.00 0.00 4.18
8112 9147 3.064958 TGCTTTGTACTATCTCCGTCTCG 59.935 47.826 0.00 0.00 0.00 4.04
8127 9162 3.003482 CCGTCTCGGTGAATAAGTCTAGG 59.997 52.174 0.00 0.00 42.73 3.02
8128 9163 3.626670 CGTCTCGGTGAATAAGTCTAGGT 59.373 47.826 0.00 0.00 0.00 3.08
8129 9164 4.260702 CGTCTCGGTGAATAAGTCTAGGTC 60.261 50.000 0.00 0.00 0.00 3.85
8130 9165 3.875727 TCTCGGTGAATAAGTCTAGGTCG 59.124 47.826 0.00 0.00 0.00 4.79
8131 9166 2.947652 TCGGTGAATAAGTCTAGGTCGG 59.052 50.000 0.00 0.00 0.00 4.79
8133 9168 2.543238 GGTGAATAAGTCTAGGTCGGCG 60.543 54.545 0.00 0.00 0.00 6.46
8135 9170 3.004524 GTGAATAAGTCTAGGTCGGCGAT 59.995 47.826 14.79 0.00 0.00 4.58
8136 9171 3.635373 TGAATAAGTCTAGGTCGGCGATT 59.365 43.478 14.79 7.55 0.00 3.34
8138 9173 5.300034 TGAATAAGTCTAGGTCGGCGATTTA 59.700 40.000 14.79 8.01 0.00 1.40
8139 9174 5.779529 ATAAGTCTAGGTCGGCGATTTAA 57.220 39.130 14.79 0.00 0.00 1.52
8141 9176 4.667519 AGTCTAGGTCGGCGATTTAATT 57.332 40.909 14.79 0.00 0.00 1.40
8142 9177 5.779529 AGTCTAGGTCGGCGATTTAATTA 57.220 39.130 14.79 0.00 0.00 1.40
8143 9178 6.342338 AGTCTAGGTCGGCGATTTAATTAT 57.658 37.500 14.79 0.00 0.00 1.28
8144 9179 6.756221 AGTCTAGGTCGGCGATTTAATTATT 58.244 36.000 14.79 0.00 0.00 1.40
8148 9183 9.715121 TCTAGGTCGGCGATTTAATTATTTAAT 57.285 29.630 14.79 0.00 0.00 1.40
8213 9279 6.716934 ACATCCGTGTAGAAATCTAGTGAT 57.283 37.500 0.00 0.00 36.63 3.06
8215 9281 8.410673 ACATCCGTGTAGAAATCTAGTGATAT 57.589 34.615 0.00 0.00 36.63 1.63
8286 9410 5.924825 AGTACTGTTTTGTTTAGGTAGCGAG 59.075 40.000 0.00 0.00 0.00 5.03
8302 9426 4.561735 AGCGAGTAGAGAGCTAATTGAC 57.438 45.455 0.00 0.00 39.74 3.18
8329 9453 3.572255 TGCATTTCCCAGTCTACCAAAAC 59.428 43.478 0.00 0.00 0.00 2.43
8574 9711 5.751243 TTTTCTTGTTCCTTCCTCTTTCG 57.249 39.130 0.00 0.00 0.00 3.46
8755 9892 1.425066 AGGTGAGGCTTGTGGAATTCA 59.575 47.619 7.93 0.00 0.00 2.57
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
72 73 4.415501 CTCAACTCGTGCACGCGC 62.416 66.667 33.63 0.00 39.60 6.86
110 116 7.147846 GGATCCATGTTACAATGAAAGTGGAAT 60.148 37.037 6.95 0.00 36.95 3.01
112 118 5.652014 GGATCCATGTTACAATGAAAGTGGA 59.348 40.000 6.95 4.39 35.33 4.02
113 119 5.653769 AGGATCCATGTTACAATGAAAGTGG 59.346 40.000 15.82 0.00 35.33 4.00
114 120 6.764308 AGGATCCATGTTACAATGAAAGTG 57.236 37.500 15.82 0.00 38.30 3.16
115 121 6.538742 CGTAGGATCCATGTTACAATGAAAGT 59.461 38.462 15.82 0.00 0.00 2.66
197 206 1.063114 ACACGGGGAAGATAGCTACCT 60.063 52.381 0.00 0.00 0.00 3.08
198 207 1.411041 ACACGGGGAAGATAGCTACC 58.589 55.000 0.00 0.00 0.00 3.18
199 208 4.615452 CGATAACACGGGGAAGATAGCTAC 60.615 50.000 0.00 0.00 0.00 3.58
200 209 3.504906 CGATAACACGGGGAAGATAGCTA 59.495 47.826 0.00 0.00 0.00 3.32
205 214 2.361438 GAGTCGATAACACGGGGAAGAT 59.639 50.000 0.00 0.00 0.00 2.40
248 257 4.821589 CCAGCGGCGAAGGACCTC 62.822 72.222 12.98 0.00 0.00 3.85
389 398 3.203040 ACAGGATAAGGTTCCCCATGAAG 59.797 47.826 0.00 0.00 36.35 3.02
424 433 2.305928 CAATCCATAAATCCGCCCACA 58.694 47.619 0.00 0.00 0.00 4.17
437 446 2.167662 GAACCACGAAACCCAATCCAT 58.832 47.619 0.00 0.00 0.00 3.41
450 459 2.306255 AATCGATCCCCGGAACCACG 62.306 60.000 0.73 2.04 39.14 4.94
472 481 3.603965 ACTATCCAACCAACCAACCAA 57.396 42.857 0.00 0.00 0.00 3.67
480 489 4.083080 TCCCCTAGAACTATCCAACCAA 57.917 45.455 0.00 0.00 0.00 3.67
481 490 3.788116 TCCCCTAGAACTATCCAACCA 57.212 47.619 0.00 0.00 0.00 3.67
482 491 5.648330 ATTTCCCCTAGAACTATCCAACC 57.352 43.478 0.00 0.00 32.95 3.77
483 492 6.768381 CAGAATTTCCCCTAGAACTATCCAAC 59.232 42.308 0.00 0.00 32.95 3.77
572 581 4.999469 AGCCAACATATATCCACATCCA 57.001 40.909 0.00 0.00 0.00 3.41
669 678 1.072965 ACTGCTCCAACCAAGAGAAGG 59.927 52.381 1.04 0.00 40.85 3.46
714 723 5.722021 AAGTTTCATGTATCCAACCAACC 57.278 39.130 0.00 0.00 0.00 3.77
720 729 9.023962 AGCTTGATAAAAGTTTCATGTATCCAA 57.976 29.630 0.00 0.00 0.00 3.53
735 744 7.596995 CGATGGTTTTTACCAAGCTTGATAAAA 59.403 33.333 27.70 27.70 43.83 1.52
736 745 7.087639 CGATGGTTTTTACCAAGCTTGATAAA 58.912 34.615 28.05 23.81 43.83 1.40
776 785 8.818057 CCAAATCAAACAGCAGTATAGTACTAC 58.182 37.037 4.31 0.00 37.23 2.73
860 869 3.063510 TCCCACATCTGAGCTCAAAAG 57.936 47.619 18.85 12.16 0.00 2.27
868 877 3.056962 CGATGGTAGATCCCACATCTGAG 60.057 52.174 15.06 1.97 37.31 3.35
869 878 2.893489 CGATGGTAGATCCCACATCTGA 59.107 50.000 15.06 0.00 37.31 3.27
953 964 0.179015 TACCGGTGCCTGCAAAGAAA 60.179 50.000 19.93 0.00 0.00 2.52
956 967 0.039527 GTTTACCGGTGCCTGCAAAG 60.040 55.000 19.93 0.00 0.00 2.77
968 979 2.292292 CCAAAGAACCACAGGTTTACCG 59.708 50.000 2.55 0.00 46.95 4.02
997 1008 2.407340 ACCAGAGTCCCCTCCATATC 57.593 55.000 0.00 0.00 38.58 1.63
1029 1040 2.722487 CTGTAGGCGGTAGGAGCG 59.278 66.667 0.00 0.00 42.73 5.03
1049 1060 2.894565 CGGGACCGCGTAGAGCTAG 61.895 68.421 4.92 0.00 45.59 3.42
1101 1112 1.203149 AGAGTAAGGGTCCTCGTTGGT 60.203 52.381 0.00 0.00 37.07 3.67
1245 1256 4.444838 TCGAACATGGCCCGGACG 62.445 66.667 0.73 4.68 0.00 4.79
1678 1690 9.846248 ACAAACTGATCAAAATTACAGAATAGC 57.154 29.630 0.00 0.00 34.88 2.97
1682 1694 9.959749 GGTTACAAACTGATCAAAATTACAGAA 57.040 29.630 0.00 0.00 34.88 3.02
1683 1695 9.126151 TGGTTACAAACTGATCAAAATTACAGA 57.874 29.630 0.00 0.00 34.88 3.41
1684 1696 9.743057 TTGGTTACAAACTGATCAAAATTACAG 57.257 29.630 0.00 0.00 32.66 2.74
1746 1758 5.751586 TGACTAAGAAAACAGAACAGGGTT 58.248 37.500 0.00 0.00 0.00 4.11
1821 1932 6.369890 CACTAATGGAGTCATAAATCCGGATG 59.630 42.308 19.95 7.14 38.52 3.51
1860 1971 4.115516 CACCTGATGATAACTTGTCCTCG 58.884 47.826 0.00 0.00 0.00 4.63
1877 1988 1.545582 CCATACCCAGCAAAACACCTG 59.454 52.381 0.00 0.00 0.00 4.00
1885 1996 2.106511 GCTCTATTCCCATACCCAGCAA 59.893 50.000 0.00 0.00 0.00 3.91
1890 2001 1.699634 TGCAGCTCTATTCCCATACCC 59.300 52.381 0.00 0.00 0.00 3.69
1893 2004 4.292186 GGAATGCAGCTCTATTCCCATA 57.708 45.455 20.60 0.00 44.17 2.74
1902 2013 0.465097 CCGAATGGGAATGCAGCTCT 60.465 55.000 0.00 0.00 38.47 4.09
1940 2051 3.983044 AGGTGAGATGAGTTAACCACC 57.017 47.619 17.04 17.04 43.08 4.61
1949 2060 3.683822 GCTTCAACAGAAGGTGAGATGAG 59.316 47.826 7.28 0.00 39.30 2.90
1987 2098 3.501911 AGGGGATGGGAATGGCGG 61.502 66.667 0.00 0.00 0.00 6.13
1989 2100 1.152673 GTCAGGGGATGGGAATGGC 60.153 63.158 0.00 0.00 0.00 4.40
2057 2184 1.911357 AGCCTCAGATGGTCAATCACA 59.089 47.619 0.00 0.00 37.81 3.58
2062 2189 0.833287 GCCTAGCCTCAGATGGTCAA 59.167 55.000 0.00 0.00 0.00 3.18
2075 2202 8.887717 CATAAAATAATACTCATGAGGCCTAGC 58.112 37.037 26.08 0.00 0.00 3.42
2076 2203 9.950496 ACATAAAATAATACTCATGAGGCCTAG 57.050 33.333 26.08 0.71 0.00 3.02
2077 2204 9.725019 CACATAAAATAATACTCATGAGGCCTA 57.275 33.333 26.08 13.70 0.00 3.93
2078 2205 8.220559 ACACATAAAATAATACTCATGAGGCCT 58.779 33.333 26.08 3.86 0.00 5.19
2079 2206 8.396272 ACACATAAAATAATACTCATGAGGCC 57.604 34.615 26.08 0.00 0.00 5.19
2132 2259 9.298250 ACTCTGAAAGTAAGAACAGTATACTGA 57.702 33.333 34.16 12.83 40.55 3.41
2133 2260 9.562583 GACTCTGAAAGTAAGAACAGTATACTG 57.437 37.037 27.66 27.66 43.40 2.74
2139 2266 7.584122 TGTAGACTCTGAAAGTAAGAACAGT 57.416 36.000 0.00 0.00 38.74 3.55
2225 2361 8.604640 TCATTCTAGATTAGTCACCTACTACG 57.395 38.462 0.00 0.00 40.48 3.51
2253 2391 6.071952 GGACCTGATGATCACTTTTGCTTAAA 60.072 38.462 0.00 0.00 0.00 1.52
2292 2430 7.696992 TTCCAGTGTAAAAGAAGAACAAAGT 57.303 32.000 0.00 0.00 0.00 2.66
2359 2499 4.248859 ACATCACTTAAGCTAGCACACTG 58.751 43.478 18.83 5.35 0.00 3.66
2669 2811 5.967674 CAGCAAAATAAGGAAGACGCAATAG 59.032 40.000 0.00 0.00 0.00 1.73
2671 2813 4.737054 CAGCAAAATAAGGAAGACGCAAT 58.263 39.130 0.00 0.00 0.00 3.56
2673 2815 2.095263 GCAGCAAAATAAGGAAGACGCA 60.095 45.455 0.00 0.00 0.00 5.24
2674 2816 2.162408 AGCAGCAAAATAAGGAAGACGC 59.838 45.455 0.00 0.00 0.00 5.19
2675 2817 4.154918 AGAAGCAGCAAAATAAGGAAGACG 59.845 41.667 0.00 0.00 0.00 4.18
2681 2838 5.182760 AGTCTCAAGAAGCAGCAAAATAAGG 59.817 40.000 0.00 0.00 0.00 2.69
2962 3204 6.268847 ACCAACCATTCTTATAACCTGCAAAA 59.731 34.615 0.00 0.00 0.00 2.44
2964 3206 5.184864 CACCAACCATTCTTATAACCTGCAA 59.815 40.000 0.00 0.00 0.00 4.08
3104 3346 0.890683 GGCAAAAGGACACATGGGAG 59.109 55.000 0.00 0.00 0.00 4.30
3463 3913 6.772716 TCTCATACACATCAGTATCAGTGCTA 59.227 38.462 0.00 0.00 35.47 3.49
3475 3925 7.067494 CCGATATGGATACTCTCATACACATCA 59.933 40.741 0.00 0.00 42.00 3.07
3479 3929 5.067936 CCCCGATATGGATACTCTCATACAC 59.932 48.000 0.00 0.00 42.00 2.90
3483 3933 4.026744 CACCCCGATATGGATACTCTCAT 58.973 47.826 0.00 0.00 42.00 2.90
3486 3936 3.827817 TCACCCCGATATGGATACTCT 57.172 47.619 0.00 0.00 42.00 3.24
3487 3937 3.430929 GCATCACCCCGATATGGATACTC 60.431 52.174 0.00 0.00 42.00 2.59
3488 3938 2.501723 GCATCACCCCGATATGGATACT 59.498 50.000 0.00 0.00 42.00 2.12
3489 3939 2.738643 CGCATCACCCCGATATGGATAC 60.739 54.545 0.00 0.00 42.00 2.24
3490 3940 1.480545 CGCATCACCCCGATATGGATA 59.519 52.381 0.00 0.00 42.00 2.59
3491 3941 0.250234 CGCATCACCCCGATATGGAT 59.750 55.000 0.00 0.00 42.00 3.41
3492 3942 1.671166 CGCATCACCCCGATATGGA 59.329 57.895 0.00 0.00 42.00 3.41
3493 3943 1.375908 CCGCATCACCCCGATATGG 60.376 63.158 0.00 0.00 31.20 2.74
3494 3944 1.375908 CCCGCATCACCCCGATATG 60.376 63.158 0.00 0.00 31.20 1.78
3495 3945 2.592993 CCCCGCATCACCCCGATAT 61.593 63.158 0.00 0.00 31.20 1.63
3496 3946 3.238497 CCCCGCATCACCCCGATA 61.238 66.667 0.00 0.00 31.20 2.92
3501 3951 2.830186 TTACAAGCCCCGCATCACCC 62.830 60.000 0.00 0.00 0.00 4.61
3502 3952 0.963355 TTTACAAGCCCCGCATCACC 60.963 55.000 0.00 0.00 0.00 4.02
3503 3953 1.102978 ATTTACAAGCCCCGCATCAC 58.897 50.000 0.00 0.00 0.00 3.06
3504 3954 1.102154 CATTTACAAGCCCCGCATCA 58.898 50.000 0.00 0.00 0.00 3.07
3505 3955 1.334869 CTCATTTACAAGCCCCGCATC 59.665 52.381 0.00 0.00 0.00 3.91
3506 3956 1.340991 ACTCATTTACAAGCCCCGCAT 60.341 47.619 0.00 0.00 0.00 4.73
3507 3957 0.037590 ACTCATTTACAAGCCCCGCA 59.962 50.000 0.00 0.00 0.00 5.69
3508 3958 0.451783 CACTCATTTACAAGCCCCGC 59.548 55.000 0.00 0.00 0.00 6.13
3509 3959 1.821216 ACACTCATTTACAAGCCCCG 58.179 50.000 0.00 0.00 0.00 5.73
3510 3960 3.632145 CCATACACTCATTTACAAGCCCC 59.368 47.826 0.00 0.00 0.00 5.80
3511 3961 3.632145 CCCATACACTCATTTACAAGCCC 59.368 47.826 0.00 0.00 0.00 5.19
3512 3962 4.523083 TCCCATACACTCATTTACAAGCC 58.477 43.478 0.00 0.00 0.00 4.35
3513 3963 6.204882 GGTATCCCATACACTCATTTACAAGC 59.795 42.308 0.00 0.00 37.48 4.01
3514 3964 6.423905 CGGTATCCCATACACTCATTTACAAG 59.576 42.308 0.00 0.00 37.48 3.16
3515 3965 6.098552 TCGGTATCCCATACACTCATTTACAA 59.901 38.462 0.00 0.00 37.48 2.41
3516 3966 5.599242 TCGGTATCCCATACACTCATTTACA 59.401 40.000 0.00 0.00 37.48 2.41
3517 3967 6.092955 TCGGTATCCCATACACTCATTTAC 57.907 41.667 0.00 0.00 37.48 2.01
3518 3968 6.928348 ATCGGTATCCCATACACTCATTTA 57.072 37.500 0.00 0.00 37.48 1.40
3519 3969 5.825593 ATCGGTATCCCATACACTCATTT 57.174 39.130 0.00 0.00 37.48 2.32
3520 3970 6.440647 ACATATCGGTATCCCATACACTCATT 59.559 38.462 0.00 0.00 37.48 2.57
3521 3971 5.958380 ACATATCGGTATCCCATACACTCAT 59.042 40.000 0.00 0.00 37.48 2.90
3522 3972 5.185056 CACATATCGGTATCCCATACACTCA 59.815 44.000 0.00 0.00 37.48 3.41
3523 3973 5.185249 ACACATATCGGTATCCCATACACTC 59.815 44.000 0.00 0.00 37.48 3.51
3524 3974 5.084519 ACACATATCGGTATCCCATACACT 58.915 41.667 0.00 0.00 37.48 3.55
3525 3975 5.401531 ACACATATCGGTATCCCATACAC 57.598 43.478 0.00 0.00 37.48 2.90
3526 3976 6.893005 TCATACACATATCGGTATCCCATACA 59.107 38.462 0.00 0.00 37.48 2.29
3527 3977 7.068348 ACTCATACACATATCGGTATCCCATAC 59.932 40.741 0.00 0.00 35.00 2.39
3528 3978 7.068226 CACTCATACACATATCGGTATCCCATA 59.932 40.741 0.00 0.00 0.00 2.74
3529 3979 5.958380 ACTCATACACATATCGGTATCCCAT 59.042 40.000 0.00 0.00 0.00 4.00
3530 3980 5.185056 CACTCATACACATATCGGTATCCCA 59.815 44.000 0.00 0.00 0.00 4.37
3531 3981 5.185249 ACACTCATACACATATCGGTATCCC 59.815 44.000 0.00 0.00 0.00 3.85
3532 3982 6.268825 ACACTCATACACATATCGGTATCC 57.731 41.667 0.00 0.00 0.00 2.59
3533 3983 8.129840 GGATACACTCATACACATATCGGTATC 58.870 40.741 0.00 0.00 35.09 2.24
3534 3984 7.614192 TGGATACACTCATACACATATCGGTAT 59.386 37.037 0.00 0.00 46.17 2.73
3535 3985 6.943718 TGGATACACTCATACACATATCGGTA 59.056 38.462 0.00 0.00 46.17 4.02
3536 3986 5.773176 TGGATACACTCATACACATATCGGT 59.227 40.000 0.00 0.00 46.17 4.69
3537 3987 6.267496 TGGATACACTCATACACATATCGG 57.733 41.667 0.00 0.00 46.17 4.18
3554 4004 7.145323 ACAAGCACAAAATAAACTGTGGATAC 58.855 34.615 4.53 0.00 42.62 2.24
3555 4005 7.283625 ACAAGCACAAAATAAACTGTGGATA 57.716 32.000 4.53 0.00 42.62 2.59
3556 4006 6.160576 ACAAGCACAAAATAAACTGTGGAT 57.839 33.333 4.53 0.00 42.62 3.41
3557 4007 5.590530 ACAAGCACAAAATAAACTGTGGA 57.409 34.783 4.53 0.00 42.62 4.02
3558 4008 7.763172 TTTACAAGCACAAAATAAACTGTGG 57.237 32.000 4.53 0.00 42.62 4.17
3559 4009 9.029243 TCATTTACAAGCACAAAATAAACTGTG 57.971 29.630 0.00 0.00 44.70 3.66
3560 4010 9.248291 CTCATTTACAAGCACAAAATAAACTGT 57.752 29.630 0.00 0.00 0.00 3.55
3561 4011 9.248291 ACTCATTTACAAGCACAAAATAAACTG 57.752 29.630 0.00 0.00 0.00 3.16
3564 4014 9.405587 GCTACTCATTTACAAGCACAAAATAAA 57.594 29.630 0.00 0.00 33.38 1.40
3565 4015 8.572185 TGCTACTCATTTACAAGCACAAAATAA 58.428 29.630 0.00 0.00 38.22 1.40
3566 4016 8.105097 TGCTACTCATTTACAAGCACAAAATA 57.895 30.769 0.00 0.00 38.22 1.40
3567 4017 6.980593 TGCTACTCATTTACAAGCACAAAAT 58.019 32.000 0.00 0.00 38.22 1.82
3568 4018 6.384258 TGCTACTCATTTACAAGCACAAAA 57.616 33.333 0.00 0.00 38.22 2.44
3569 4019 6.206438 TCATGCTACTCATTTACAAGCACAAA 59.794 34.615 0.00 0.00 45.18 2.83
3570 4020 5.704978 TCATGCTACTCATTTACAAGCACAA 59.295 36.000 0.00 0.00 45.18 3.33
3571 4021 5.244755 TCATGCTACTCATTTACAAGCACA 58.755 37.500 0.00 0.00 45.18 4.57
3572 4022 5.801350 TCATGCTACTCATTTACAAGCAC 57.199 39.130 0.00 0.00 45.18 4.40
3573 4023 7.254898 GCTATTCATGCTACTCATTTACAAGCA 60.255 37.037 0.00 0.00 46.30 3.91
3574 4024 7.074502 GCTATTCATGCTACTCATTTACAAGC 58.925 38.462 0.00 0.00 31.79 4.01
3575 4025 8.146479 TGCTATTCATGCTACTCATTTACAAG 57.854 34.615 0.00 0.00 31.79 3.16
3576 4026 8.504812 TTGCTATTCATGCTACTCATTTACAA 57.495 30.769 0.00 0.00 31.79 2.41
3577 4027 8.562052 CATTGCTATTCATGCTACTCATTTACA 58.438 33.333 0.00 0.00 31.79 2.41
3578 4028 7.536622 GCATTGCTATTCATGCTACTCATTTAC 59.463 37.037 0.16 0.00 37.10 2.01
3579 4029 7.571798 CGCATTGCTATTCATGCTACTCATTTA 60.572 37.037 7.12 0.00 37.84 1.40
3580 4030 6.444633 GCATTGCTATTCATGCTACTCATTT 58.555 36.000 0.16 0.00 37.10 2.32
3581 4031 5.334646 CGCATTGCTATTCATGCTACTCATT 60.335 40.000 7.12 0.00 37.84 2.57
3582 4032 4.153655 CGCATTGCTATTCATGCTACTCAT 59.846 41.667 7.12 0.00 37.84 2.90
3583 4033 3.495753 CGCATTGCTATTCATGCTACTCA 59.504 43.478 7.12 0.00 37.84 3.41
3584 4034 3.120408 CCGCATTGCTATTCATGCTACTC 60.120 47.826 7.12 0.00 37.84 2.59
3585 4035 2.810274 CCGCATTGCTATTCATGCTACT 59.190 45.455 7.12 0.00 37.84 2.57
3586 4036 2.666619 GCCGCATTGCTATTCATGCTAC 60.667 50.000 7.12 0.00 37.84 3.58
3587 4037 1.536766 GCCGCATTGCTATTCATGCTA 59.463 47.619 7.12 0.00 37.84 3.49
3588 4038 0.313043 GCCGCATTGCTATTCATGCT 59.687 50.000 7.12 0.00 37.84 3.79
3589 4039 0.313043 AGCCGCATTGCTATTCATGC 59.687 50.000 7.12 0.00 40.56 4.06
3596 4046 8.110172 AGCAAAATTAAAATAGCCGCATTGCTA 61.110 33.333 7.12 2.50 45.44 3.49
3597 4047 5.220643 GCAAAATTAAAATAGCCGCATTGCT 60.221 36.000 7.12 0.00 45.38 3.91
3598 4048 4.963352 GCAAAATTAAAATAGCCGCATTGC 59.037 37.500 0.00 0.00 33.62 3.56
3599 4049 6.348621 AGCAAAATTAAAATAGCCGCATTG 57.651 33.333 0.00 0.00 0.00 2.82
3600 4050 7.710475 ACATAGCAAAATTAAAATAGCCGCATT 59.290 29.630 0.00 0.00 0.00 3.56
3601 4051 7.209475 ACATAGCAAAATTAAAATAGCCGCAT 58.791 30.769 0.00 0.00 0.00 4.73
3602 4052 6.568869 ACATAGCAAAATTAAAATAGCCGCA 58.431 32.000 0.00 0.00 0.00 5.69
3603 4053 8.215899 CTACATAGCAAAATTAAAATAGCCGC 57.784 34.615 0.00 0.00 0.00 6.53
3643 4093 2.231478 AGCAACCCGATATGGATACTCG 59.769 50.000 0.00 0.00 42.00 4.18
3660 4112 1.823470 GCCCATGTATCCGCAGCAA 60.823 57.895 0.00 0.00 0.00 3.91
3663 4115 1.859427 GCATGCCCATGTATCCGCAG 61.859 60.000 6.36 0.00 40.80 5.18
3690 4142 5.697473 TCGATGTATTGGCAACTTCAAAA 57.303 34.783 0.00 0.00 37.61 2.44
3694 4146 5.984233 TGTATCGATGTATTGGCAACTTC 57.016 39.130 8.54 0.00 37.61 3.01
3718 4170 6.089417 GCATTGGCATTTTTGTGTAGTAGTTC 59.911 38.462 0.00 0.00 40.72 3.01
3758 4215 1.127343 GCTCTATCTGCCCCAACTCT 58.873 55.000 0.00 0.00 0.00 3.24
3857 4315 7.225931 GCATTTATCGAAGACCAAATACCTACA 59.774 37.037 0.00 0.00 42.51 2.74
3870 4330 2.158813 GGGGTCTGGCATTTATCGAAGA 60.159 50.000 0.00 0.00 45.75 2.87
3874 4334 1.134098 AGTGGGGTCTGGCATTTATCG 60.134 52.381 0.00 0.00 0.00 2.92
4367 4827 9.460019 TGGATATGTTCAACAAGTATCAAATGA 57.540 29.630 11.56 0.00 0.00 2.57
4444 4906 9.787435 ATGTTACTATGAAAACTCTTAACACCA 57.213 29.630 0.00 0.00 32.41 4.17
4460 4923 2.645838 AGGCCTGCCATGTTACTATG 57.354 50.000 3.11 0.00 38.92 2.23
4486 4949 8.773645 CAGTACAGAATGACAAGTAAAATCACA 58.226 33.333 0.00 0.00 39.69 3.58
4487 4950 8.988934 TCAGTACAGAATGACAAGTAAAATCAC 58.011 33.333 0.00 0.00 39.69 3.06
4488 4951 8.988934 GTCAGTACAGAATGACAAGTAAAATCA 58.011 33.333 7.83 0.00 44.21 2.57
4597 5061 3.197265 GCAACTGACAAAAGCCACATTT 58.803 40.909 0.00 0.00 0.00 2.32
4600 5064 1.180907 TGCAACTGACAAAAGCCACA 58.819 45.000 0.00 0.00 0.00 4.17
4601 5065 2.292103 TTGCAACTGACAAAAGCCAC 57.708 45.000 0.00 0.00 0.00 5.01
4602 5066 2.418471 CCTTTGCAACTGACAAAAGCCA 60.418 45.455 0.00 0.00 36.63 4.75
4616 5092 5.528043 TTAAACAAGCTTGATCCTTTGCA 57.472 34.783 32.50 10.72 0.00 4.08
4776 5252 2.890442 GCTTCTTCAGCCTTTCTTCG 57.110 50.000 0.00 0.00 43.65 3.79
4833 5309 4.783242 ACGTGTGCACTTCATCAATAAAC 58.217 39.130 19.41 1.84 0.00 2.01
4964 5440 1.755959 AGCAACACAGAACAATGGCAA 59.244 42.857 0.00 0.00 0.00 4.52
5050 5904 1.542915 CATGGCTTGTCAACTGGAAGG 59.457 52.381 0.00 0.00 39.30 3.46
5114 5968 9.317936 CAATGCACTGAAAGATAGAACAGTATA 57.682 33.333 0.00 0.00 40.84 1.47
5467 6325 4.223923 ACAAGTATTTCAGGACTGAGGGAG 59.776 45.833 1.92 0.00 41.13 4.30
5468 6326 4.168101 ACAAGTATTTCAGGACTGAGGGA 58.832 43.478 1.92 0.00 41.13 4.20
5469 6327 4.508662 GACAAGTATTTCAGGACTGAGGG 58.491 47.826 1.92 0.00 41.13 4.30
5470 6328 4.177026 CGACAAGTATTTCAGGACTGAGG 58.823 47.826 1.92 0.00 41.13 3.86
5471 6329 4.082190 TCCGACAAGTATTTCAGGACTGAG 60.082 45.833 1.92 0.00 41.13 3.35
5472 6330 3.830178 TCCGACAAGTATTTCAGGACTGA 59.170 43.478 0.00 0.00 37.91 3.41
5473 6331 4.082190 TCTCCGACAAGTATTTCAGGACTG 60.082 45.833 0.00 0.00 0.00 3.51
5474 6332 4.087182 TCTCCGACAAGTATTTCAGGACT 58.913 43.478 0.00 0.00 0.00 3.85
5475 6333 4.451629 TCTCCGACAAGTATTTCAGGAC 57.548 45.455 0.00 0.00 0.00 3.85
5476 6334 5.477607 TTTCTCCGACAAGTATTTCAGGA 57.522 39.130 0.00 0.00 0.00 3.86
5477 6335 7.843490 TTATTTCTCCGACAAGTATTTCAGG 57.157 36.000 0.00 0.00 0.00 3.86
5485 6343 9.855021 CCAATTTAATTTATTTCTCCGACAAGT 57.145 29.630 0.00 0.00 0.00 3.16
5526 6384 9.535878 GAGAAAGGATGAATCTAGACGTATTTT 57.464 33.333 0.00 0.00 0.00 1.82
5527 6385 8.145122 GGAGAAAGGATGAATCTAGACGTATTT 58.855 37.037 0.00 0.00 0.00 1.40
5528 6386 7.522399 CGGAGAAAGGATGAATCTAGACGTATT 60.522 40.741 0.00 0.00 0.00 1.89
5529 6387 6.072397 CGGAGAAAGGATGAATCTAGACGTAT 60.072 42.308 0.00 0.00 0.00 3.06
5530 6388 5.238868 CGGAGAAAGGATGAATCTAGACGTA 59.761 44.000 0.00 0.00 0.00 3.57
5531 6389 4.036971 CGGAGAAAGGATGAATCTAGACGT 59.963 45.833 0.00 0.00 0.00 4.34
5532 6390 4.276183 TCGGAGAAAGGATGAATCTAGACG 59.724 45.833 0.00 0.00 0.00 4.18
5533 6391 5.067936 TGTCGGAGAAAGGATGAATCTAGAC 59.932 44.000 0.00 0.00 39.69 2.59
5534 6392 5.201243 TGTCGGAGAAAGGATGAATCTAGA 58.799 41.667 0.00 0.00 39.69 2.43
5535 6393 5.521906 TGTCGGAGAAAGGATGAATCTAG 57.478 43.478 0.00 0.00 39.69 2.43
5536 6394 5.422331 ACTTGTCGGAGAAAGGATGAATCTA 59.578 40.000 5.61 0.00 39.69 1.98
5537 6395 4.223923 ACTTGTCGGAGAAAGGATGAATCT 59.776 41.667 5.61 0.00 39.69 2.40
5538 6396 4.508662 ACTTGTCGGAGAAAGGATGAATC 58.491 43.478 5.61 0.00 39.69 2.52
5539 6397 4.559862 ACTTGTCGGAGAAAGGATGAAT 57.440 40.909 5.61 0.00 39.69 2.57
5540 6398 5.677319 ATACTTGTCGGAGAAAGGATGAA 57.323 39.130 5.61 0.00 39.69 2.57
5541 6399 5.677319 AATACTTGTCGGAGAAAGGATGA 57.323 39.130 0.09 0.00 39.69 2.92
5542 6400 5.294552 GGAAATACTTGTCGGAGAAAGGATG 59.705 44.000 0.09 0.00 39.69 3.51
5543 6401 5.429130 GGAAATACTTGTCGGAGAAAGGAT 58.571 41.667 5.61 0.17 39.69 3.24
5544 6402 4.619863 CGGAAATACTTGTCGGAGAAAGGA 60.620 45.833 5.61 0.00 39.69 3.36
5545 6403 3.617263 CGGAAATACTTGTCGGAGAAAGG 59.383 47.826 5.61 0.00 39.69 3.11
5546 6404 3.617263 CCGGAAATACTTGTCGGAGAAAG 59.383 47.826 0.00 0.00 42.94 2.62
5547 6405 3.258872 TCCGGAAATACTTGTCGGAGAAA 59.741 43.478 0.00 0.00 43.84 2.52
5548 6406 2.827322 TCCGGAAATACTTGTCGGAGAA 59.173 45.455 0.00 0.00 43.84 2.87
5549 6407 2.449464 TCCGGAAATACTTGTCGGAGA 58.551 47.619 0.00 0.00 43.84 3.71
5550 6408 2.953466 TCCGGAAATACTTGTCGGAG 57.047 50.000 0.00 0.00 43.84 4.63
5551 6409 1.135315 CGTCCGGAAATACTTGTCGGA 60.135 52.381 5.23 0.00 46.06 4.55
5552 6410 1.274596 CGTCCGGAAATACTTGTCGG 58.725 55.000 5.23 0.00 41.80 4.79
5553 6411 1.135315 TCCGTCCGGAAATACTTGTCG 60.135 52.381 5.23 1.25 42.05 4.35
5554 6412 2.537401 CTCCGTCCGGAAATACTTGTC 58.463 52.381 5.23 0.00 44.66 3.18
5555 6413 1.206371 CCTCCGTCCGGAAATACTTGT 59.794 52.381 5.23 0.00 44.66 3.16
5556 6414 1.472728 CCCTCCGTCCGGAAATACTTG 60.473 57.143 5.23 0.00 44.66 3.16
5557 6415 0.828677 CCCTCCGTCCGGAAATACTT 59.171 55.000 5.23 0.00 44.66 2.24
5558 6416 0.032813 TCCCTCCGTCCGGAAATACT 60.033 55.000 5.23 0.00 44.66 2.12
5559 6417 0.388294 CTCCCTCCGTCCGGAAATAC 59.612 60.000 5.23 0.00 44.66 1.89
5560 6418 0.032813 ACTCCCTCCGTCCGGAAATA 60.033 55.000 5.23 0.00 44.66 1.40
5561 6419 0.032813 TACTCCCTCCGTCCGGAAAT 60.033 55.000 5.23 0.00 44.66 2.17
5562 6420 0.032813 ATACTCCCTCCGTCCGGAAA 60.033 55.000 5.23 0.00 44.66 3.13
5563 6421 0.846015 TATACTCCCTCCGTCCGGAA 59.154 55.000 5.23 0.00 44.66 4.30
5564 6422 0.846015 TTATACTCCCTCCGTCCGGA 59.154 55.000 0.00 0.00 42.90 5.14
5565 6423 1.920610 ATTATACTCCCTCCGTCCGG 58.079 55.000 0.00 0.00 0.00 5.14
5566 6424 4.461781 ACAATATTATACTCCCTCCGTCCG 59.538 45.833 0.00 0.00 0.00 4.79
5567 6425 5.479375 TCACAATATTATACTCCCTCCGTCC 59.521 44.000 0.00 0.00 0.00 4.79
5568 6426 6.585695 TCACAATATTATACTCCCTCCGTC 57.414 41.667 0.00 0.00 0.00 4.79
5569 6427 6.989155 TTCACAATATTATACTCCCTCCGT 57.011 37.500 0.00 0.00 0.00 4.69
5570 6428 7.331934 CACATTCACAATATTATACTCCCTCCG 59.668 40.741 0.00 0.00 0.00 4.63
5571 6429 8.157476 ACACATTCACAATATTATACTCCCTCC 58.843 37.037 0.00 0.00 0.00 4.30
5572 6430 9.209175 GACACATTCACAATATTATACTCCCTC 57.791 37.037 0.00 0.00 0.00 4.30
5573 6431 8.938883 AGACACATTCACAATATTATACTCCCT 58.061 33.333 0.00 0.00 0.00 4.20
5574 6432 8.993121 CAGACACATTCACAATATTATACTCCC 58.007 37.037 0.00 0.00 0.00 4.30
5575 6433 9.764363 TCAGACACATTCACAATATTATACTCC 57.236 33.333 0.00 0.00 0.00 3.85
5598 6456 5.954296 ACCACAAGAGATGTCAAAATCAG 57.046 39.130 0.00 0.00 41.46 2.90
5691 6549 0.680921 CACCAATGCAATCCCCTCGT 60.681 55.000 0.00 0.00 0.00 4.18
5699 6557 8.145767 CCAAATAATGAGATACACCAATGCAAT 58.854 33.333 0.00 0.00 0.00 3.56
5752 6610 2.239400 GGAACCTAAGCAAAAGCCAGT 58.761 47.619 0.00 0.00 0.00 4.00
5765 6623 2.107378 TGTGAAGCACATTGGGAACCTA 59.893 45.455 0.00 0.00 44.84 3.08
5767 6625 1.327303 TGTGAAGCACATTGGGAACC 58.673 50.000 0.00 0.00 44.82 3.62
5786 6644 4.382147 GCGAAAGTCTAGAAGAATGGGAGT 60.382 45.833 0.00 0.00 0.00 3.85
5821 6679 6.131972 ACGGCAGTATTATACTACCTCCTA 57.868 41.667 16.90 0.00 39.60 2.94
5822 6680 4.995536 ACGGCAGTATTATACTACCTCCT 58.004 43.478 16.90 0.47 39.60 3.69
5823 6681 5.718724 AACGGCAGTATTATACTACCTCC 57.281 43.478 16.90 9.77 39.60 4.30
5824 6682 6.640092 GTGAAACGGCAGTATTATACTACCTC 59.360 42.308 16.90 10.01 39.60 3.85
5825 6683 6.462067 GGTGAAACGGCAGTATTATACTACCT 60.462 42.308 16.90 1.74 39.60 3.08
5826 6684 5.693555 GGTGAAACGGCAGTATTATACTACC 59.306 44.000 10.81 10.81 38.59 3.18
5827 6685 5.693555 GGGTGAAACGGCAGTATTATACTAC 59.306 44.000 4.41 0.00 35.51 2.73
5828 6686 5.599656 AGGGTGAAACGGCAGTATTATACTA 59.400 40.000 4.41 0.00 35.51 1.82
5829 6687 4.407945 AGGGTGAAACGGCAGTATTATACT 59.592 41.667 0.00 0.00 37.28 2.12
5863 6879 1.462731 TTGTGCAGGCAATGACACCC 61.463 55.000 0.00 0.00 36.01 4.61
5874 6890 5.804473 TGCAATTTAATTATCGTTGTGCAGG 59.196 36.000 0.00 0.00 34.75 4.85
5919 6935 6.207417 AGTCAACCAATGTCAAGGATAACAAG 59.793 38.462 1.97 0.00 0.00 3.16
5935 6951 3.483808 TGCATGTGTAGAGTCAACCAA 57.516 42.857 0.00 0.00 0.00 3.67
5956 6972 7.682459 TCATTATAGGAGGGCTAATAATCACCA 59.318 37.037 0.00 0.00 0.00 4.17
6047 7063 8.486210 ACAAATCAGATTATTGGCTCTACTACA 58.514 33.333 0.00 0.00 0.00 2.74
6198 7214 3.584406 TCTCTGGGATCACAACTGTTCAT 59.416 43.478 0.00 0.00 0.00 2.57
6203 7219 1.406614 GGCTCTCTGGGATCACAACTG 60.407 57.143 0.00 0.00 0.00 3.16
6205 7221 0.908198 AGGCTCTCTGGGATCACAAC 59.092 55.000 0.00 0.00 0.00 3.32
6232 7248 7.442666 GGATAATGGTTAAACAAAAACAAGGCA 59.557 33.333 0.00 0.00 27.97 4.75
6254 7270 6.378745 TCAGGTAGCTGTAATGTAAGGGATA 58.621 40.000 20.76 0.00 0.00 2.59
6434 7463 6.293353 CCAAATGAACCAATAAACTTGCAACC 60.293 38.462 0.00 0.00 0.00 3.77
6435 7464 6.657888 CCAAATGAACCAATAAACTTGCAAC 58.342 36.000 0.00 0.00 0.00 4.17
6477 7506 7.630082 TGATTAGAGGCACCTTACAAGTAATT 58.370 34.615 0.00 0.00 0.00 1.40
6478 7507 7.195374 TGATTAGAGGCACCTTACAAGTAAT 57.805 36.000 0.00 0.00 0.00 1.89
6561 7590 7.496591 ACAGTAAGATAACACGGAAGAAACAAA 59.503 33.333 0.00 0.00 0.00 2.83
6634 7663 1.899142 GGCTGTAATTTGGGCCTTCAA 59.101 47.619 4.53 0.00 41.20 2.69
6831 7860 4.740634 GCTTCATCCTGACCAATGATACGA 60.741 45.833 0.00 0.00 32.24 3.43
6843 7872 2.430465 GCTTTGACAGCTTCATCCTGA 58.570 47.619 0.00 0.00 46.27 3.86
7098 8127 2.168496 TCTGTTAGTTGACCTCCCTCG 58.832 52.381 0.00 0.00 0.00 4.63
7251 8280 4.313282 TGATCAGCAGAGTGTTCTTGAAG 58.687 43.478 0.00 0.00 0.00 3.02
7263 8292 3.806625 TTCGATGTCATGATCAGCAGA 57.193 42.857 0.00 0.00 0.00 4.26
7413 8442 6.013898 TCTCATCCAATCTGTTCAAGAACTCT 60.014 38.462 13.49 0.00 41.67 3.24
7799 8828 6.313905 ACACCAAGCTGAGATAACGAAATAAG 59.686 38.462 0.00 0.00 0.00 1.73
7822 8851 2.313643 TCTAGGTACCATCACCAGGACA 59.686 50.000 15.94 0.00 41.40 4.02
7891 8920 6.303054 TCAAGAGAGTGAAAGAAGAGAGAGA 58.697 40.000 0.00 0.00 0.00 3.10
7892 8921 6.573664 TCAAGAGAGTGAAAGAAGAGAGAG 57.426 41.667 0.00 0.00 0.00 3.20
8017 9052 8.398665 GCAACTACTCTCTCAAAAAGAAAAGAA 58.601 33.333 0.00 0.00 32.23 2.52
8019 9054 7.924940 AGCAACTACTCTCTCAAAAAGAAAAG 58.075 34.615 0.00 0.00 32.23 2.27
8063 9098 1.134699 TGCAGGTAGATGAAGCCTTCG 60.135 52.381 0.00 0.00 0.00 3.79
8107 9142 4.260702 CGACCTAGACTTATTCACCGAGAC 60.261 50.000 0.00 0.00 0.00 3.36
8109 9144 3.003482 CCGACCTAGACTTATTCACCGAG 59.997 52.174 0.00 0.00 0.00 4.63
8110 9145 2.947652 CCGACCTAGACTTATTCACCGA 59.052 50.000 0.00 0.00 0.00 4.69
8112 9147 2.543238 CGCCGACCTAGACTTATTCACC 60.543 54.545 0.00 0.00 0.00 4.02
8113 9148 2.357009 TCGCCGACCTAGACTTATTCAC 59.643 50.000 0.00 0.00 0.00 3.18
8114 9149 2.646930 TCGCCGACCTAGACTTATTCA 58.353 47.619 0.00 0.00 0.00 2.57
8115 9150 3.919223 ATCGCCGACCTAGACTTATTC 57.081 47.619 0.00 0.00 0.00 1.75
8117 9152 5.779529 TTAAATCGCCGACCTAGACTTAT 57.220 39.130 0.00 0.00 0.00 1.73
8118 9153 5.779529 ATTAAATCGCCGACCTAGACTTA 57.220 39.130 0.00 0.00 0.00 2.24
8121 9156 7.417496 AAATAATTAAATCGCCGACCTAGAC 57.583 36.000 0.00 0.00 0.00 2.59
8122 9157 9.715121 ATTAAATAATTAAATCGCCGACCTAGA 57.285 29.630 0.00 0.00 34.80 2.43
8253 9319 9.583765 CCTAAACAAAACAGTACTACCTCTATC 57.416 37.037 0.00 0.00 0.00 2.08
8257 9323 7.330454 GCTACCTAAACAAAACAGTACTACCTC 59.670 40.741 0.00 0.00 0.00 3.85
8260 9326 6.863126 TCGCTACCTAAACAAAACAGTACTAC 59.137 38.462 0.00 0.00 0.00 2.73
8262 9328 5.846203 TCGCTACCTAAACAAAACAGTACT 58.154 37.500 0.00 0.00 0.00 2.73
8264 9330 5.846203 ACTCGCTACCTAAACAAAACAGTA 58.154 37.500 0.00 0.00 0.00 2.74
8265 9331 4.700700 ACTCGCTACCTAAACAAAACAGT 58.299 39.130 0.00 0.00 0.00 3.55
8266 9332 6.154445 TCTACTCGCTACCTAAACAAAACAG 58.846 40.000 0.00 0.00 0.00 3.16
8267 9333 6.016024 TCTCTACTCGCTACCTAAACAAAACA 60.016 38.462 0.00 0.00 0.00 2.83
8268 9334 6.385033 TCTCTACTCGCTACCTAAACAAAAC 58.615 40.000 0.00 0.00 0.00 2.43
8269 9335 6.579666 TCTCTACTCGCTACCTAAACAAAA 57.420 37.500 0.00 0.00 0.00 2.44
8286 9410 2.223525 ACGGCGTCAATTAGCTCTCTAC 60.224 50.000 6.77 0.00 0.00 2.59
8302 9426 3.039202 GACTGGGAAATGCACGGCG 62.039 63.158 4.80 4.80 0.00 6.46
8329 9453 3.431912 TGTCGTTTCACGGAGATGATTTG 59.568 43.478 0.00 0.00 42.81 2.32
8558 9695 3.231818 AGAGACGAAAGAGGAAGGAACA 58.768 45.455 0.00 0.00 0.00 3.18
8559 9696 3.945981 AGAGACGAAAGAGGAAGGAAC 57.054 47.619 0.00 0.00 0.00 3.62
8563 9700 7.171167 TCGTATATGTAGAGACGAAAGAGGAAG 59.829 40.741 0.00 0.00 41.04 3.46
8574 9711 5.333952 CGTGAAGGGTCGTATATGTAGAGAC 60.334 48.000 0.00 0.00 0.00 3.36


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.