Multiple sequence alignment - TraesCS2B01G304100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G304100 chr2B 100.000 1664 0 0 1469 3132 432133871 432132208 0.000000e+00 3073.0
1 TraesCS2B01G304100 chr2B 100.000 1229 0 0 1 1229 432135339 432134111 0.000000e+00 2270.0
2 TraesCS2B01G304100 chr2D 95.672 670 23 4 1469 2133 363974947 363974279 0.000000e+00 1072.0
3 TraesCS2B01G304100 chr2D 97.323 523 11 2 1 522 363976057 363975537 0.000000e+00 885.0
4 TraesCS2B01G304100 chr2D 93.750 560 16 7 683 1229 363975540 363974987 0.000000e+00 822.0
5 TraesCS2B01G304100 chr2D 91.379 174 14 1 2210 2383 445733840 445733668 1.450000e-58 237.0
6 TraesCS2B01G304100 chr2D 93.023 129 7 2 545 673 293525016 293524890 1.480000e-43 187.0
7 TraesCS2B01G304100 chr2A 95.789 665 26 2 1469 2133 489960769 489960107 0.000000e+00 1072.0
8 TraesCS2B01G304100 chr2A 94.604 556 15 11 1 548 489962130 489961582 0.000000e+00 846.0
9 TraesCS2B01G304100 chr2A 94.353 549 10 7 694 1229 489961349 489960809 0.000000e+00 822.0
10 TraesCS2B01G304100 chr2A 82.822 326 48 5 2376 2699 489959962 489959643 5.110000e-73 285.0
11 TraesCS2B01G304100 chr2A 100.000 39 0 0 2130 2168 489960077 489960039 4.330000e-09 73.1
12 TraesCS2B01G304100 chr3D 89.735 302 31 0 1738 2039 277066713 277067014 1.360000e-103 387.0
13 TraesCS2B01G304100 chr3D 93.413 167 10 1 2218 2383 181652452 181652618 2.410000e-61 246.0
14 TraesCS2B01G304100 chr3D 93.701 127 6 2 545 670 323325967 323326092 4.120000e-44 189.0
15 TraesCS2B01G304100 chr3D 97.590 83 2 0 1523 1605 277066532 277066614 3.260000e-30 143.0
16 TraesCS2B01G304100 chr3B 89.865 296 29 1 1744 2039 373285471 373285177 2.280000e-101 379.0
17 TraesCS2B01G304100 chr3B 81.493 335 49 9 2698 3022 378442571 378442902 2.400000e-66 263.0
18 TraesCS2B01G304100 chr3B 94.479 163 9 0 2218 2380 677850587 677850425 5.190000e-63 252.0
19 TraesCS2B01G304100 chr3B 78.550 331 61 8 2736 3060 450224006 450223680 3.170000e-50 209.0
20 TraesCS2B01G304100 chr3B 96.512 86 3 0 1523 1608 373285658 373285573 3.260000e-30 143.0
21 TraesCS2B01G304100 chr3A 89.527 296 31 0 1744 2039 362591279 362590984 2.950000e-100 375.0
22 TraesCS2B01G304100 chr3A 97.561 82 2 0 1523 1604 362591466 362591385 1.170000e-29 141.0
23 TraesCS2B01G304100 chr1D 81.879 447 66 11 2698 3131 483067661 483067217 2.300000e-96 363.0
24 TraesCS2B01G304100 chr1D 81.440 361 59 7 2698 3052 335072518 335072160 3.950000e-74 289.0
25 TraesCS2B01G304100 chr1D 93.827 162 10 0 2218 2379 427827082 427826921 8.680000e-61 244.0
26 TraesCS2B01G304100 chr5D 86.275 306 39 2 1737 2039 356901530 356901835 2.330000e-86 329.0
27 TraesCS2B01G304100 chr5D 84.286 280 33 9 2698 2971 486273429 486273155 2.400000e-66 263.0
28 TraesCS2B01G304100 chr5D 93.069 101 7 0 1518 1618 356901299 356901399 7.000000e-32 148.0
29 TraesCS2B01G304100 chr5A 85.621 306 41 2 1737 2039 458214120 458214425 5.040000e-83 318.0
30 TraesCS2B01G304100 chr5A 81.471 367 59 7 2699 3059 663620590 663620227 3.060000e-75 292.0
31 TraesCS2B01G304100 chr5A 92.308 130 8 2 541 670 46282337 46282464 1.920000e-42 183.0
32 TraesCS2B01G304100 chr4A 82.574 373 54 9 2703 3067 600951197 600951566 5.040000e-83 318.0
33 TraesCS2B01G304100 chr4A 85.455 165 8 9 518 669 690940665 690940504 1.160000e-34 158.0
34 TraesCS2B01G304100 chr5B 84.641 306 44 2 1737 2039 421668936 421669241 5.080000e-78 302.0
35 TraesCS2B01G304100 chr5B 77.628 371 65 9 2698 3059 321981221 321981582 3.170000e-50 209.0
36 TraesCS2B01G304100 chr5B 92.708 96 7 0 1523 1618 421668711 421668806 4.210000e-29 139.0
37 TraesCS2B01G304100 chr7A 79.787 376 56 14 2696 3060 681913500 681913134 4.010000e-64 255.0
38 TraesCS2B01G304100 chr1B 96.154 156 5 1 2228 2383 359208573 359208419 1.440000e-63 254.0
39 TraesCS2B01G304100 chr6B 94.444 162 9 0 2218 2379 699977449 699977610 1.860000e-62 250.0
40 TraesCS2B01G304100 chr6B 88.312 154 15 3 520 673 613573046 613572896 6.900000e-42 182.0
41 TraesCS2B01G304100 chr4B 94.444 162 9 0 2218 2379 63753841 63754002 1.860000e-62 250.0
42 TraesCS2B01G304100 chr7D 93.333 165 11 0 2217 2381 453283664 453283500 8.680000e-61 244.0
43 TraesCS2B01G304100 chr6A 82.292 288 43 7 2765 3049 578952571 578952289 3.120000e-60 243.0
44 TraesCS2B01G304100 chrUn 92.727 165 12 0 2218 2382 22162857 22162693 4.040000e-59 239.0
45 TraesCS2B01G304100 chrUn 93.651 126 6 2 545 670 10355681 10355804 1.480000e-43 187.0
46 TraesCS2B01G304100 chrUn 93.651 126 6 2 545 670 287712302 287712425 1.480000e-43 187.0
47 TraesCS2B01G304100 chr6D 93.651 126 6 2 544 669 68083192 68083069 1.480000e-43 187.0
48 TraesCS2B01G304100 chr6D 94.286 35 2 0 2519 2553 107978891 107978925 2.000000e-03 54.7
49 TraesCS2B01G304100 chr4D 93.023 129 6 1 545 673 81896480 81896605 5.330000e-43 185.0
50 TraesCS2B01G304100 chr7B 91.729 133 8 3 542 673 483328206 483328076 6.900000e-42 182.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G304100 chr2B 432132208 432135339 3131 True 2671.500000 3073 100.000000 1 3132 2 chr2B.!!$R1 3131
1 TraesCS2B01G304100 chr2D 363974279 363976057 1778 True 926.333333 1072 95.581667 1 2133 3 chr2D.!!$R3 2132
2 TraesCS2B01G304100 chr2A 489959643 489962130 2487 True 619.620000 1072 93.513600 1 2699 5 chr2A.!!$R1 2698
3 TraesCS2B01G304100 chr5D 356901299 356901835 536 False 238.500000 329 89.672000 1518 2039 2 chr5D.!!$F1 521
4 TraesCS2B01G304100 chr5B 421668711 421669241 530 False 220.500000 302 88.674500 1523 2039 2 chr5B.!!$F2 516

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
66 67 1.609208 TGAGGCTTTTGGAAGACAGC 58.391 50.000 0.00 0.0 43.79 4.40 F
1177 1287 1.425066 AGGTGAGGCTTGTGGAATTCA 59.575 47.619 7.93 0.0 0.00 2.57 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1186 1296 1.135774 CAAGAGAGCACACGCGTACTA 60.136 52.381 13.44 0.00 45.49 1.82 R
2984 3186 0.101219 GTGGAAATGGCCAGAATCGC 59.899 55.000 13.05 4.11 38.95 4.58 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
66 67 1.609208 TGAGGCTTTTGGAAGACAGC 58.391 50.000 0.00 0.00 43.79 4.40
244 245 6.640518 TCTTATTTCGTTATCTCAGCTTGGT 58.359 36.000 0.00 0.00 0.00 3.67
305 306 6.672266 TTCAGTTATGTGTTCTCCTCTTCT 57.328 37.500 0.00 0.00 0.00 2.85
485 492 4.122776 TGCTCTGTTTCTGAAGAACAGTC 58.877 43.478 17.31 12.60 45.86 3.51
523 530 4.994852 CCTGCAGTTACTTGCTTTGTACTA 59.005 41.667 13.81 0.00 44.38 1.82
527 534 6.590292 TGCAGTTACTTGCTTTGTACTATCTC 59.410 38.462 7.91 0.00 44.38 2.75
529 536 6.253727 CAGTTACTTGCTTTGTACTATCTCCG 59.746 42.308 0.00 0.00 0.00 4.63
531 538 4.745649 ACTTGCTTTGTACTATCTCCGTC 58.254 43.478 0.00 0.00 0.00 4.79
532 539 4.463186 ACTTGCTTTGTACTATCTCCGTCT 59.537 41.667 0.00 0.00 0.00 4.18
534 541 3.064958 TGCTTTGTACTATCTCCGTCTCG 59.935 47.826 0.00 0.00 0.00 4.04
548 558 4.212213 CCGTCTCGGTGAATAAGTCTAG 57.788 50.000 0.00 0.00 42.73 2.43
549 559 3.003482 CCGTCTCGGTGAATAAGTCTAGG 59.997 52.174 0.00 0.00 42.73 3.02
552 562 3.875727 TCTCGGTGAATAAGTCTAGGTCG 59.124 47.826 0.00 0.00 0.00 4.79
553 563 2.947652 TCGGTGAATAAGTCTAGGTCGG 59.052 50.000 0.00 0.00 0.00 4.79
554 564 2.543238 CGGTGAATAAGTCTAGGTCGGC 60.543 54.545 0.00 0.00 0.00 5.54
555 565 2.543238 GGTGAATAAGTCTAGGTCGGCG 60.543 54.545 0.00 0.00 0.00 6.46
556 566 2.357009 GTGAATAAGTCTAGGTCGGCGA 59.643 50.000 4.99 4.99 0.00 5.54
560 570 5.300034 TGAATAAGTCTAGGTCGGCGATTTA 59.700 40.000 14.79 8.01 0.00 1.40
561 571 5.779529 ATAAGTCTAGGTCGGCGATTTAA 57.220 39.130 14.79 0.00 0.00 1.52
562 572 4.667519 AAGTCTAGGTCGGCGATTTAAT 57.332 40.909 14.79 0.00 0.00 1.40
563 573 4.667519 AGTCTAGGTCGGCGATTTAATT 57.332 40.909 14.79 0.00 0.00 1.40
564 574 5.779529 AGTCTAGGTCGGCGATTTAATTA 57.220 39.130 14.79 0.00 0.00 1.40
565 575 6.342338 AGTCTAGGTCGGCGATTTAATTAT 57.658 37.500 14.79 0.00 0.00 1.28
566 576 6.756221 AGTCTAGGTCGGCGATTTAATTATT 58.244 36.000 14.79 0.00 0.00 1.40
567 577 7.215085 AGTCTAGGTCGGCGATTTAATTATTT 58.785 34.615 14.79 0.00 0.00 1.40
568 578 8.362639 AGTCTAGGTCGGCGATTTAATTATTTA 58.637 33.333 14.79 0.00 0.00 1.40
569 579 8.981647 GTCTAGGTCGGCGATTTAATTATTTAA 58.018 33.333 14.79 0.00 0.00 1.52
570 580 9.715121 TCTAGGTCGGCGATTTAATTATTTAAT 57.285 29.630 14.79 0.00 0.00 1.40
635 673 6.716934 ACATCCGTGTAGAAATCTAGTGAT 57.283 37.500 0.00 0.00 36.63 3.06
637 675 8.410673 ACATCCGTGTAGAAATCTAGTGATAT 57.589 34.615 0.00 0.00 36.63 1.63
708 805 5.924825 AGTACTGTTTTGTTTAGGTAGCGAG 59.075 40.000 0.00 0.00 0.00 5.03
724 821 4.561735 AGCGAGTAGAGAGCTAATTGAC 57.438 45.455 0.00 0.00 39.74 3.18
751 848 3.572255 TGCATTTCCCAGTCTACCAAAAC 59.428 43.478 0.00 0.00 0.00 2.43
996 1106 5.751243 TTTTCTTGTTCCTTCCTCTTTCG 57.249 39.130 0.00 0.00 0.00 3.46
1177 1287 1.425066 AGGTGAGGCTTGTGGAATTCA 59.575 47.619 7.93 0.00 0.00 2.57
1649 1762 5.462398 ACGTAGCGATATCCAGAAATGAAAC 59.538 40.000 0.00 0.00 0.00 2.78
1678 1791 5.685511 TCAAGCAATCTAAAGTTTTCGTTGC 59.314 36.000 17.00 17.00 40.37 4.17
2099 2247 1.924731 CCAGTCACCTAGAGACCACA 58.075 55.000 10.51 0.00 36.68 4.17
2123 2273 2.035961 GCCTAAGATACCATCGCAGTCA 59.964 50.000 0.00 0.00 0.00 3.41
2124 2274 3.306364 GCCTAAGATACCATCGCAGTCAT 60.306 47.826 0.00 0.00 0.00 3.06
2127 2277 5.184096 CCTAAGATACCATCGCAGTCATAGT 59.816 44.000 0.00 0.00 0.00 2.12
2168 2350 3.518634 ACGATTTTGTGTGGCTTGTTT 57.481 38.095 0.00 0.00 0.00 2.83
2169 2351 3.855858 ACGATTTTGTGTGGCTTGTTTT 58.144 36.364 0.00 0.00 0.00 2.43
2171 2353 4.328712 ACGATTTTGTGTGGCTTGTTTTTC 59.671 37.500 0.00 0.00 0.00 2.29
2173 2355 5.063312 CGATTTTGTGTGGCTTGTTTTTCTT 59.937 36.000 0.00 0.00 0.00 2.52
2174 2356 6.402011 CGATTTTGTGTGGCTTGTTTTTCTTT 60.402 34.615 0.00 0.00 0.00 2.52
2181 2381 6.315144 GTGTGGCTTGTTTTTCTTTTGGTAAT 59.685 34.615 0.00 0.00 0.00 1.89
2231 2431 8.617290 TTCTTATGAAGTACTTCCTTTGTTCC 57.383 34.615 28.43 5.78 38.77 3.62
2232 2432 7.974504 TCTTATGAAGTACTTCCTTTGTTCCT 58.025 34.615 28.43 8.07 38.77 3.36
2233 2433 9.096823 TCTTATGAAGTACTTCCTTTGTTCCTA 57.903 33.333 28.43 9.77 38.77 2.94
2234 2434 9.720769 CTTATGAAGTACTTCCTTTGTTCCTAA 57.279 33.333 28.43 9.30 38.77 2.69
2247 2447 9.667107 TCCTTTGTTCCTAAATATAAGTCTGTG 57.333 33.333 0.00 0.00 0.00 3.66
2248 2448 8.893727 CCTTTGTTCCTAAATATAAGTCTGTGG 58.106 37.037 0.00 0.00 0.00 4.17
2249 2449 9.667107 CTTTGTTCCTAAATATAAGTCTGTGGA 57.333 33.333 0.00 0.00 0.00 4.02
2250 2450 9.667107 TTTGTTCCTAAATATAAGTCTGTGGAG 57.333 33.333 0.00 0.00 0.00 3.86
2251 2451 8.603898 TGTTCCTAAATATAAGTCTGTGGAGA 57.396 34.615 0.00 0.00 0.00 3.71
2252 2452 8.696374 TGTTCCTAAATATAAGTCTGTGGAGAG 58.304 37.037 0.00 0.00 0.00 3.20
2253 2453 8.915036 GTTCCTAAATATAAGTCTGTGGAGAGA 58.085 37.037 0.00 0.00 0.00 3.10
2254 2454 9.661954 TTCCTAAATATAAGTCTGTGGAGAGAT 57.338 33.333 0.00 0.00 0.00 2.75
2255 2455 9.661954 TCCTAAATATAAGTCTGTGGAGAGATT 57.338 33.333 0.00 0.00 0.00 2.40
2259 2459 9.606631 AAATATAAGTCTGTGGAGAGATTTCAC 57.393 33.333 0.00 0.00 0.00 3.18
2260 2460 6.865834 ATAAGTCTGTGGAGAGATTTCACT 57.134 37.500 0.00 0.00 33.04 3.41
2261 2461 7.962995 ATAAGTCTGTGGAGAGATTTCACTA 57.037 36.000 0.00 0.00 33.04 2.74
2262 2462 6.865834 AAGTCTGTGGAGAGATTTCACTAT 57.134 37.500 0.00 0.00 33.04 2.12
2263 2463 6.219417 AGTCTGTGGAGAGATTTCACTATG 57.781 41.667 0.00 0.00 33.04 2.23
2264 2464 5.954752 AGTCTGTGGAGAGATTTCACTATGA 59.045 40.000 0.00 0.00 33.04 2.15
2265 2465 6.438741 AGTCTGTGGAGAGATTTCACTATGAA 59.561 38.462 0.00 0.00 34.03 2.57
2266 2466 6.533367 GTCTGTGGAGAGATTTCACTATGAAC 59.467 42.308 0.00 0.00 35.89 3.18
2267 2467 5.734720 TGTGGAGAGATTTCACTATGAACC 58.265 41.667 0.00 0.00 35.89 3.62
2268 2468 5.248248 TGTGGAGAGATTTCACTATGAACCA 59.752 40.000 0.00 0.00 35.89 3.67
2269 2469 5.582665 GTGGAGAGATTTCACTATGAACCAC 59.417 44.000 9.61 9.61 38.20 4.16
2270 2470 5.248248 TGGAGAGATTTCACTATGAACCACA 59.752 40.000 0.00 0.00 35.89 4.17
2271 2471 6.070021 TGGAGAGATTTCACTATGAACCACAT 60.070 38.462 0.00 0.00 35.89 3.21
2272 2472 7.125659 TGGAGAGATTTCACTATGAACCACATA 59.874 37.037 0.00 0.00 35.89 2.29
2273 2473 8.153550 GGAGAGATTTCACTATGAACCACATAT 58.846 37.037 0.00 0.00 40.18 1.78
2274 2474 8.899427 AGAGATTTCACTATGAACCACATATG 57.101 34.615 0.00 0.00 40.18 1.78
2292 2492 8.502105 CACATATGGATGTATGTAGATGCATT 57.498 34.615 7.80 0.00 44.82 3.56
2293 2493 8.953313 CACATATGGATGTATGTAGATGCATTT 58.047 33.333 7.80 0.00 44.82 2.32
2294 2494 9.524496 ACATATGGATGTATGTAGATGCATTTT 57.476 29.630 7.80 0.00 44.77 1.82
2299 2499 9.407380 TGGATGTATGTAGATGCATTTTAAAGT 57.593 29.630 0.00 0.00 35.26 2.66
2300 2500 9.669353 GGATGTATGTAGATGCATTTTAAAGTG 57.331 33.333 0.00 6.35 35.26 3.16
2311 2511 9.495754 GATGCATTTTAAAGTGTAGATTCACTC 57.504 33.333 11.77 0.00 46.25 3.51
2312 2512 8.389779 TGCATTTTAAAGTGTAGATTCACTCA 57.610 30.769 11.77 0.00 46.25 3.41
2313 2513 9.013229 TGCATTTTAAAGTGTAGATTCACTCAT 57.987 29.630 11.77 0.00 46.25 2.90
2314 2514 9.846248 GCATTTTAAAGTGTAGATTCACTCATT 57.154 29.630 11.77 0.00 46.25 2.57
2318 2518 9.677567 TTTAAAGTGTAGATTCACTCATTTTGC 57.322 29.630 0.00 0.00 46.25 3.68
2319 2519 7.516198 AAAGTGTAGATTCACTCATTTTGCT 57.484 32.000 0.00 0.00 46.25 3.91
2320 2520 6.734104 AGTGTAGATTCACTCATTTTGCTC 57.266 37.500 0.00 0.00 44.07 4.26
2321 2521 5.645497 AGTGTAGATTCACTCATTTTGCTCC 59.355 40.000 0.00 0.00 44.07 4.70
2322 2522 4.631377 TGTAGATTCACTCATTTTGCTCCG 59.369 41.667 0.00 0.00 0.00 4.63
2323 2523 3.679389 AGATTCACTCATTTTGCTCCGT 58.321 40.909 0.00 0.00 0.00 4.69
2324 2524 4.832248 AGATTCACTCATTTTGCTCCGTA 58.168 39.130 0.00 0.00 0.00 4.02
2325 2525 5.431765 AGATTCACTCATTTTGCTCCGTAT 58.568 37.500 0.00 0.00 0.00 3.06
2326 2526 6.582636 AGATTCACTCATTTTGCTCCGTATA 58.417 36.000 0.00 0.00 0.00 1.47
2327 2527 7.220030 AGATTCACTCATTTTGCTCCGTATAT 58.780 34.615 0.00 0.00 0.00 0.86
2328 2528 8.367911 AGATTCACTCATTTTGCTCCGTATATA 58.632 33.333 0.00 0.00 0.00 0.86
2329 2529 7.946655 TTCACTCATTTTGCTCCGTATATAG 57.053 36.000 0.00 0.00 0.00 1.31
2330 2530 7.050970 TCACTCATTTTGCTCCGTATATAGT 57.949 36.000 0.00 0.00 0.00 2.12
2331 2531 7.145985 TCACTCATTTTGCTCCGTATATAGTC 58.854 38.462 0.00 0.00 0.00 2.59
2332 2532 6.366332 CACTCATTTTGCTCCGTATATAGTCC 59.634 42.308 0.00 0.00 0.00 3.85
2333 2533 6.041637 ACTCATTTTGCTCCGTATATAGTCCA 59.958 38.462 0.00 0.00 0.00 4.02
2334 2534 7.004555 TCATTTTGCTCCGTATATAGTCCAT 57.995 36.000 0.00 0.00 0.00 3.41
2335 2535 8.129496 TCATTTTGCTCCGTATATAGTCCATA 57.871 34.615 0.00 0.00 0.00 2.74
2336 2536 8.251026 TCATTTTGCTCCGTATATAGTCCATAG 58.749 37.037 0.00 0.00 0.00 2.23
2337 2537 7.534723 TTTTGCTCCGTATATAGTCCATAGT 57.465 36.000 0.00 0.00 0.00 2.12
2338 2538 6.510879 TTGCTCCGTATATAGTCCATAGTG 57.489 41.667 0.00 0.00 0.00 2.74
2339 2539 5.812286 TGCTCCGTATATAGTCCATAGTGA 58.188 41.667 0.00 0.00 0.00 3.41
2340 2540 6.243148 TGCTCCGTATATAGTCCATAGTGAA 58.757 40.000 0.00 0.00 0.00 3.18
2341 2541 6.717997 TGCTCCGTATATAGTCCATAGTGAAA 59.282 38.462 0.00 0.00 0.00 2.69
2342 2542 7.396339 TGCTCCGTATATAGTCCATAGTGAAAT 59.604 37.037 0.00 0.00 0.00 2.17
2343 2543 7.916450 GCTCCGTATATAGTCCATAGTGAAATC 59.084 40.741 0.00 0.00 0.00 2.17
2344 2544 9.179909 CTCCGTATATAGTCCATAGTGAAATCT 57.820 37.037 0.00 0.00 0.00 2.40
2345 2545 9.175312 TCCGTATATAGTCCATAGTGAAATCTC 57.825 37.037 0.00 0.00 0.00 2.75
2346 2546 9.179909 CCGTATATAGTCCATAGTGAAATCTCT 57.820 37.037 0.00 0.00 0.00 3.10
2353 2553 7.560368 AGTCCATAGTGAAATCTCTACAAAGG 58.440 38.462 0.00 0.00 0.00 3.11
2354 2554 6.258947 GTCCATAGTGAAATCTCTACAAAGGC 59.741 42.308 0.00 0.00 0.00 4.35
2355 2555 6.156949 TCCATAGTGAAATCTCTACAAAGGCT 59.843 38.462 0.00 0.00 0.00 4.58
2356 2556 6.825721 CCATAGTGAAATCTCTACAAAGGCTT 59.174 38.462 0.00 0.00 0.00 4.35
2357 2557 7.987458 CCATAGTGAAATCTCTACAAAGGCTTA 59.013 37.037 0.00 0.00 0.00 3.09
2358 2558 9.553064 CATAGTGAAATCTCTACAAAGGCTTAT 57.447 33.333 0.00 0.00 0.00 1.73
2369 2569 8.882415 TCTACAAAGGCTTATATTTAGGAACG 57.118 34.615 0.00 0.00 0.00 3.95
2370 2570 6.937436 ACAAAGGCTTATATTTAGGAACGG 57.063 37.500 0.00 0.00 0.00 4.44
2371 2571 6.655930 ACAAAGGCTTATATTTAGGAACGGA 58.344 36.000 0.00 0.00 0.00 4.69
2372 2572 6.766467 ACAAAGGCTTATATTTAGGAACGGAG 59.234 38.462 0.00 0.00 0.00 4.63
2373 2573 5.485209 AGGCTTATATTTAGGAACGGAGG 57.515 43.478 0.00 0.00 0.00 4.30
2374 2574 4.286291 AGGCTTATATTTAGGAACGGAGGG 59.714 45.833 0.00 0.00 0.00 4.30
2388 2588 6.614496 AGGAACGGAGGGAGTAATATAAACTT 59.386 38.462 0.00 0.00 0.00 2.66
2405 2605 4.420522 AACTTGTTGCCAATTTCATGGT 57.579 36.364 0.00 0.00 42.75 3.55
2406 2606 3.731089 ACTTGTTGCCAATTTCATGGTG 58.269 40.909 0.00 0.00 42.75 4.17
2439 2641 7.052142 ACTATTACTATGAGAGGTTTTCCGG 57.948 40.000 0.00 0.00 46.35 5.14
2449 2651 5.045869 TGAGAGGTTTTCCGGATGAAGTAAT 60.046 40.000 4.15 0.00 46.35 1.89
2493 2695 3.361794 GAGCATCTCTTAGCATGTCGA 57.638 47.619 0.00 0.00 0.00 4.20
2494 2696 3.911868 GAGCATCTCTTAGCATGTCGAT 58.088 45.455 0.00 0.00 0.00 3.59
2500 2702 8.090831 AGCATCTCTTAGCATGTCGATATTTTA 58.909 33.333 0.00 0.00 0.00 1.52
2510 2712 5.545063 TGTCGATATTTTAGGGCATCTCA 57.455 39.130 0.00 0.00 0.00 3.27
2513 2715 6.826231 TGTCGATATTTTAGGGCATCTCAAAA 59.174 34.615 0.00 0.00 0.00 2.44
2529 2731 7.541162 CATCTCAAAAGCTAATCACCAAATGA 58.459 34.615 0.00 0.00 43.13 2.57
2531 2733 7.370383 TCTCAAAAGCTAATCACCAAATGAAC 58.630 34.615 0.00 0.00 41.93 3.18
2532 2734 7.014134 TCTCAAAAGCTAATCACCAAATGAACA 59.986 33.333 0.00 0.00 41.93 3.18
2533 2735 7.669427 TCAAAAGCTAATCACCAAATGAACAT 58.331 30.769 0.00 0.00 41.93 2.71
2534 2736 7.814107 TCAAAAGCTAATCACCAAATGAACATC 59.186 33.333 0.00 0.00 41.93 3.06
2535 2737 6.839124 AAGCTAATCACCAAATGAACATCA 57.161 33.333 0.00 0.00 41.93 3.07
2536 2738 7.414222 AAGCTAATCACCAAATGAACATCAT 57.586 32.000 0.00 0.00 41.93 2.45
2537 2739 7.035840 AGCTAATCACCAAATGAACATCATC 57.964 36.000 0.00 0.00 41.93 2.92
2538 2740 6.604396 AGCTAATCACCAAATGAACATCATCA 59.396 34.615 0.00 0.00 41.93 3.07
2539 2741 7.123098 AGCTAATCACCAAATGAACATCATCAA 59.877 33.333 0.00 0.00 41.93 2.57
2540 2742 7.760794 GCTAATCACCAAATGAACATCATCAAA 59.239 33.333 0.00 0.00 41.93 2.69
2541 2743 9.811995 CTAATCACCAAATGAACATCATCAAAT 57.188 29.630 0.00 0.00 41.93 2.32
2542 2744 8.487313 AATCACCAAATGAACATCATCAAATG 57.513 30.769 0.00 0.00 41.93 2.32
2547 2749 6.311935 CCAAATGAACATCATCAAATGTCCAC 59.688 38.462 0.00 0.00 38.92 4.02
2574 2776 1.204941 GTCCTGGCATGTCTACGAACT 59.795 52.381 0.00 0.00 0.00 3.01
2577 2779 1.204704 CTGGCATGTCTACGAACTGGA 59.795 52.381 0.00 0.00 0.00 3.86
2578 2780 1.621317 TGGCATGTCTACGAACTGGAA 59.379 47.619 0.00 0.00 0.00 3.53
2579 2781 2.037902 TGGCATGTCTACGAACTGGAAA 59.962 45.455 0.00 0.00 0.00 3.13
2582 2784 3.746492 GCATGTCTACGAACTGGAAACTT 59.254 43.478 0.00 0.00 0.00 2.66
2583 2785 4.377431 GCATGTCTACGAACTGGAAACTTG 60.377 45.833 0.00 0.00 0.00 3.16
2590 2792 8.221766 GTCTACGAACTGGAAACTTGAAATTAG 58.778 37.037 0.00 0.00 0.00 1.73
2591 2793 6.313744 ACGAACTGGAAACTTGAAATTAGG 57.686 37.500 0.00 0.00 0.00 2.69
2599 2801 3.915437 ACTTGAAATTAGGTGCCAACG 57.085 42.857 0.00 0.00 0.00 4.10
2638 2840 2.566724 TCATCACTCACATGCACCACTA 59.433 45.455 0.00 0.00 0.00 2.74
2645 2847 0.914644 ACATGCACCACTAGCCTGAT 59.085 50.000 0.00 0.00 32.85 2.90
2651 2853 2.350522 CACCACTAGCCTGATGTTCAC 58.649 52.381 0.00 0.00 0.00 3.18
2672 2874 1.903183 GGGAGAGTGAAAGGCAGTAGT 59.097 52.381 0.00 0.00 0.00 2.73
2674 2876 3.131400 GGGAGAGTGAAAGGCAGTAGTAG 59.869 52.174 0.00 0.00 0.00 2.57
2684 2886 2.762535 GCAGTAGTAGCCAAACCTCA 57.237 50.000 0.00 0.00 0.00 3.86
2690 2892 5.882557 CAGTAGTAGCCAAACCTCAATGATT 59.117 40.000 0.00 0.00 0.00 2.57
2694 2896 4.996788 AGCCAAACCTCAATGATTCATC 57.003 40.909 0.00 0.00 0.00 2.92
2695 2897 3.379372 AGCCAAACCTCAATGATTCATCG 59.621 43.478 0.00 0.00 0.00 3.84
2697 2899 4.142403 GCCAAACCTCAATGATTCATCGAA 60.142 41.667 0.00 0.00 0.00 3.71
2698 2900 5.575957 CCAAACCTCAATGATTCATCGAAG 58.424 41.667 0.00 0.00 0.00 3.79
2699 2901 4.889832 AACCTCAATGATTCATCGAAGC 57.110 40.909 0.00 0.00 0.00 3.86
2700 2902 3.877559 ACCTCAATGATTCATCGAAGCA 58.122 40.909 0.00 0.00 42.10 3.91
2702 2904 4.514441 ACCTCAATGATTCATCGAAGCATC 59.486 41.667 7.82 0.00 45.95 3.91
2703 2905 4.755629 CCTCAATGATTCATCGAAGCATCT 59.244 41.667 7.82 0.00 45.95 2.90
2704 2906 5.107026 CCTCAATGATTCATCGAAGCATCTC 60.107 44.000 7.82 0.00 45.95 2.75
2705 2907 5.608449 TCAATGATTCATCGAAGCATCTCT 58.392 37.500 7.82 0.00 45.95 3.10
2706 2908 6.752168 TCAATGATTCATCGAAGCATCTCTA 58.248 36.000 7.82 0.00 45.95 2.43
2707 2909 6.867293 TCAATGATTCATCGAAGCATCTCTAG 59.133 38.462 7.82 0.00 45.95 2.43
2708 2910 4.554292 TGATTCATCGAAGCATCTCTAGC 58.446 43.478 2.22 0.00 32.88 3.42
2709 2911 4.038402 TGATTCATCGAAGCATCTCTAGCA 59.962 41.667 2.22 0.00 32.88 3.49
2710 2912 3.639716 TCATCGAAGCATCTCTAGCAG 57.360 47.619 0.00 0.00 0.00 4.24
2711 2913 3.217626 TCATCGAAGCATCTCTAGCAGA 58.782 45.455 0.00 0.00 34.78 4.26
2712 2914 3.004210 TCATCGAAGCATCTCTAGCAGAC 59.996 47.826 0.00 0.00 32.26 3.51
2713 2915 1.678627 TCGAAGCATCTCTAGCAGACC 59.321 52.381 0.00 0.00 32.26 3.85
2714 2916 1.406898 CGAAGCATCTCTAGCAGACCA 59.593 52.381 0.00 0.00 32.26 4.02
2715 2917 2.797792 CGAAGCATCTCTAGCAGACCAC 60.798 54.545 0.00 0.00 32.26 4.16
2716 2918 2.157640 AGCATCTCTAGCAGACCACT 57.842 50.000 0.00 0.00 32.26 4.00
2717 2919 2.465813 AGCATCTCTAGCAGACCACTT 58.534 47.619 0.00 0.00 32.26 3.16
2718 2920 3.636679 AGCATCTCTAGCAGACCACTTA 58.363 45.455 0.00 0.00 32.26 2.24
2719 2921 4.222336 AGCATCTCTAGCAGACCACTTAT 58.778 43.478 0.00 0.00 32.26 1.73
2720 2922 5.389520 AGCATCTCTAGCAGACCACTTATA 58.610 41.667 0.00 0.00 32.26 0.98
2721 2923 6.015918 AGCATCTCTAGCAGACCACTTATAT 58.984 40.000 0.00 0.00 32.26 0.86
2722 2924 6.152661 AGCATCTCTAGCAGACCACTTATATC 59.847 42.308 0.00 0.00 32.26 1.63
2723 2925 6.071672 GCATCTCTAGCAGACCACTTATATCA 60.072 42.308 0.00 0.00 32.26 2.15
2724 2926 6.885952 TCTCTAGCAGACCACTTATATCAC 57.114 41.667 0.00 0.00 0.00 3.06
2725 2927 5.770663 TCTCTAGCAGACCACTTATATCACC 59.229 44.000 0.00 0.00 0.00 4.02
2726 2928 4.833380 TCTAGCAGACCACTTATATCACCC 59.167 45.833 0.00 0.00 0.00 4.61
2727 2929 2.706190 AGCAGACCACTTATATCACCCC 59.294 50.000 0.00 0.00 0.00 4.95
2728 2930 2.548067 GCAGACCACTTATATCACCCCG 60.548 54.545 0.00 0.00 0.00 5.73
2729 2931 2.963101 CAGACCACTTATATCACCCCGA 59.037 50.000 0.00 0.00 0.00 5.14
2730 2932 2.963782 AGACCACTTATATCACCCCGAC 59.036 50.000 0.00 0.00 0.00 4.79
2731 2933 2.696707 GACCACTTATATCACCCCGACA 59.303 50.000 0.00 0.00 0.00 4.35
2732 2934 2.433239 ACCACTTATATCACCCCGACAC 59.567 50.000 0.00 0.00 0.00 3.67
2733 2935 2.432874 CCACTTATATCACCCCGACACA 59.567 50.000 0.00 0.00 0.00 3.72
2734 2936 3.071023 CCACTTATATCACCCCGACACAT 59.929 47.826 0.00 0.00 0.00 3.21
2735 2937 4.282449 CCACTTATATCACCCCGACACATA 59.718 45.833 0.00 0.00 0.00 2.29
2736 2938 5.221561 CCACTTATATCACCCCGACACATAA 60.222 44.000 0.00 0.00 0.00 1.90
2737 2939 6.285224 CACTTATATCACCCCGACACATAAA 58.715 40.000 0.00 0.00 0.00 1.40
2738 2940 6.764085 CACTTATATCACCCCGACACATAAAA 59.236 38.462 0.00 0.00 0.00 1.52
2739 2941 7.444183 CACTTATATCACCCCGACACATAAAAT 59.556 37.037 0.00 0.00 0.00 1.82
2740 2942 8.653191 ACTTATATCACCCCGACACATAAAATA 58.347 33.333 0.00 0.00 0.00 1.40
2741 2943 9.496873 CTTATATCACCCCGACACATAAAATAA 57.503 33.333 0.00 0.00 0.00 1.40
2743 2945 6.877611 ATCACCCCGACACATAAAATAATC 57.122 37.500 0.00 0.00 0.00 1.75
2744 2946 4.812091 TCACCCCGACACATAAAATAATCG 59.188 41.667 0.00 0.00 0.00 3.34
2745 2947 4.573201 CACCCCGACACATAAAATAATCGT 59.427 41.667 0.00 0.00 0.00 3.73
2746 2948 4.812626 ACCCCGACACATAAAATAATCGTC 59.187 41.667 0.00 0.00 0.00 4.20
2747 2949 4.812091 CCCCGACACATAAAATAATCGTCA 59.188 41.667 0.00 0.00 0.00 4.35
2748 2950 5.050363 CCCCGACACATAAAATAATCGTCAG 60.050 44.000 0.00 0.00 0.00 3.51
2749 2951 5.522460 CCCGACACATAAAATAATCGTCAGT 59.478 40.000 0.00 0.00 0.00 3.41
2750 2952 6.036735 CCCGACACATAAAATAATCGTCAGTT 59.963 38.462 0.00 0.00 0.00 3.16
2751 2953 7.223193 CCCGACACATAAAATAATCGTCAGTTA 59.777 37.037 0.00 0.00 0.00 2.24
2752 2954 8.054236 CCGACACATAAAATAATCGTCAGTTAC 58.946 37.037 0.00 0.00 0.00 2.50
2753 2955 8.588789 CGACACATAAAATAATCGTCAGTTACA 58.411 33.333 0.00 0.00 0.00 2.41
2754 2956 9.901724 GACACATAAAATAATCGTCAGTTACAG 57.098 33.333 0.00 0.00 0.00 2.74
2755 2957 9.431887 ACACATAAAATAATCGTCAGTTACAGT 57.568 29.630 0.00 0.00 0.00 3.55
2760 2962 5.796350 ATAATCGTCAGTTACAGTTTGGC 57.204 39.130 0.00 0.00 0.00 4.52
2761 2963 2.605837 TCGTCAGTTACAGTTTGGCA 57.394 45.000 0.00 0.00 0.00 4.92
2762 2964 3.120321 TCGTCAGTTACAGTTTGGCAT 57.880 42.857 0.00 0.00 0.00 4.40
2763 2965 2.805671 TCGTCAGTTACAGTTTGGCATG 59.194 45.455 0.00 0.00 0.00 4.06
2764 2966 2.805671 CGTCAGTTACAGTTTGGCATGA 59.194 45.455 0.00 0.00 0.00 3.07
2765 2967 3.249799 CGTCAGTTACAGTTTGGCATGAA 59.750 43.478 0.00 0.00 0.00 2.57
2766 2968 4.260990 CGTCAGTTACAGTTTGGCATGAAA 60.261 41.667 0.00 0.00 0.00 2.69
2767 2969 5.587289 GTCAGTTACAGTTTGGCATGAAAA 58.413 37.500 0.00 0.00 0.00 2.29
2768 2970 6.039616 GTCAGTTACAGTTTGGCATGAAAAA 58.960 36.000 0.00 0.00 0.00 1.94
2785 2987 3.982576 AAAAATGACCCGAACAGACAC 57.017 42.857 0.00 0.00 0.00 3.67
2786 2988 1.892209 AAATGACCCGAACAGACACC 58.108 50.000 0.00 0.00 0.00 4.16
2787 2989 0.762418 AATGACCCGAACAGACACCA 59.238 50.000 0.00 0.00 0.00 4.17
2788 2990 0.984230 ATGACCCGAACAGACACCAT 59.016 50.000 0.00 0.00 0.00 3.55
2789 2991 1.634960 TGACCCGAACAGACACCATA 58.365 50.000 0.00 0.00 0.00 2.74
2790 2992 1.972075 TGACCCGAACAGACACCATAA 59.028 47.619 0.00 0.00 0.00 1.90
2791 2993 2.369203 TGACCCGAACAGACACCATAAA 59.631 45.455 0.00 0.00 0.00 1.40
2792 2994 2.740447 GACCCGAACAGACACCATAAAC 59.260 50.000 0.00 0.00 0.00 2.01
2793 2995 1.730064 CCCGAACAGACACCATAAACG 59.270 52.381 0.00 0.00 0.00 3.60
2794 2996 1.127951 CCGAACAGACACCATAAACGC 59.872 52.381 0.00 0.00 0.00 4.84
2795 2997 1.201769 CGAACAGACACCATAAACGCG 60.202 52.381 3.53 3.53 0.00 6.01
2796 2998 0.515564 AACAGACACCATAAACGCGC 59.484 50.000 5.73 0.00 0.00 6.86
2797 2999 0.601576 ACAGACACCATAAACGCGCA 60.602 50.000 5.73 0.00 0.00 6.09
2798 3000 0.179225 CAGACACCATAAACGCGCAC 60.179 55.000 5.73 0.00 0.00 5.34
2800 3002 1.619526 GACACCATAAACGCGCACGA 61.620 55.000 5.73 0.00 43.93 4.35
2801 3003 1.225637 CACCATAAACGCGCACGAC 60.226 57.895 5.73 0.00 43.93 4.34
2802 3004 2.385091 ACCATAAACGCGCACGACC 61.385 57.895 5.73 0.00 43.93 4.79
2803 3005 2.398036 CATAAACGCGCACGACCC 59.602 61.111 5.73 0.00 43.93 4.46
2804 3006 2.098233 CATAAACGCGCACGACCCT 61.098 57.895 5.73 0.00 43.93 4.34
2805 3007 1.375013 ATAAACGCGCACGACCCTT 60.375 52.632 5.73 0.00 43.93 3.95
2806 3008 0.108709 ATAAACGCGCACGACCCTTA 60.109 50.000 5.73 0.00 43.93 2.69
2807 3009 0.319383 TAAACGCGCACGACCCTTAA 60.319 50.000 5.73 0.00 43.93 1.85
2808 3010 1.159098 AAACGCGCACGACCCTTAAA 61.159 50.000 5.73 0.00 43.93 1.52
2809 3011 0.952010 AACGCGCACGACCCTTAAAT 60.952 50.000 5.73 0.00 43.93 1.40
2810 3012 0.952010 ACGCGCACGACCCTTAAATT 60.952 50.000 5.73 0.00 43.93 1.82
2811 3013 0.167251 CGCGCACGACCCTTAAATTT 59.833 50.000 8.75 0.00 43.93 1.82
2812 3014 1.400500 CGCGCACGACCCTTAAATTTT 60.400 47.619 8.75 0.00 43.93 1.82
2813 3015 2.668250 GCGCACGACCCTTAAATTTTT 58.332 42.857 0.30 0.00 0.00 1.94
2833 3035 4.448537 TTTTGAGGGGCACGATAAATTG 57.551 40.909 0.00 0.00 0.00 2.32
2834 3036 1.388547 TGAGGGGCACGATAAATTGC 58.611 50.000 0.00 0.00 38.06 3.56
2841 3043 1.604278 GCACGATAAATTGCCCTCTCC 59.396 52.381 0.00 0.00 32.21 3.71
2842 3044 1.867233 CACGATAAATTGCCCTCTCCG 59.133 52.381 0.00 0.00 0.00 4.63
2843 3045 1.760613 ACGATAAATTGCCCTCTCCGA 59.239 47.619 0.00 0.00 0.00 4.55
2844 3046 2.135933 CGATAAATTGCCCTCTCCGAC 58.864 52.381 0.00 0.00 0.00 4.79
2845 3047 2.495084 GATAAATTGCCCTCTCCGACC 58.505 52.381 0.00 0.00 0.00 4.79
2846 3048 0.544697 TAAATTGCCCTCTCCGACCC 59.455 55.000 0.00 0.00 0.00 4.46
2847 3049 2.536997 AAATTGCCCTCTCCGACCCG 62.537 60.000 0.00 0.00 0.00 5.28
2852 3054 3.755628 CCTCTCCGACCCGCGAAA 61.756 66.667 8.23 0.00 44.57 3.46
2853 3055 2.260434 CTCTCCGACCCGCGAAAA 59.740 61.111 8.23 0.00 44.57 2.29
2854 3056 2.048877 TCTCCGACCCGCGAAAAC 60.049 61.111 8.23 0.00 44.57 2.43
2855 3057 3.116531 CTCCGACCCGCGAAAACC 61.117 66.667 8.23 0.00 44.57 3.27
2856 3058 4.685467 TCCGACCCGCGAAAACCC 62.685 66.667 8.23 0.00 44.57 4.11
2857 3059 4.992511 CCGACCCGCGAAAACCCA 62.993 66.667 8.23 0.00 44.57 4.51
2858 3060 3.419759 CGACCCGCGAAAACCCAG 61.420 66.667 8.23 0.00 44.57 4.45
2859 3061 3.733960 GACCCGCGAAAACCCAGC 61.734 66.667 8.23 0.00 0.00 4.85
2885 3087 3.697747 CCCCGTCGGTGCCTTGTA 61.698 66.667 11.06 0.00 0.00 2.41
2886 3088 2.582436 CCCGTCGGTGCCTTGTAT 59.418 61.111 11.06 0.00 0.00 2.29
2887 3089 1.520787 CCCGTCGGTGCCTTGTATC 60.521 63.158 11.06 0.00 0.00 2.24
2888 3090 1.520787 CCGTCGGTGCCTTGTATCC 60.521 63.158 2.08 0.00 0.00 2.59
2889 3091 1.515954 CGTCGGTGCCTTGTATCCT 59.484 57.895 0.00 0.00 0.00 3.24
2890 3092 0.806102 CGTCGGTGCCTTGTATCCTG 60.806 60.000 0.00 0.00 0.00 3.86
2891 3093 1.090052 GTCGGTGCCTTGTATCCTGC 61.090 60.000 0.00 0.00 0.00 4.85
2892 3094 1.078497 CGGTGCCTTGTATCCTGCA 60.078 57.895 0.00 0.00 0.00 4.41
2893 3095 0.676466 CGGTGCCTTGTATCCTGCAA 60.676 55.000 0.00 0.00 35.16 4.08
2894 3096 1.544724 GGTGCCTTGTATCCTGCAAA 58.455 50.000 0.00 0.00 35.16 3.68
2895 3097 1.892474 GGTGCCTTGTATCCTGCAAAA 59.108 47.619 0.00 0.00 35.16 2.44
2896 3098 2.094545 GGTGCCTTGTATCCTGCAAAAG 60.095 50.000 0.00 0.00 35.16 2.27
2897 3099 1.545582 TGCCTTGTATCCTGCAAAAGC 59.454 47.619 0.00 0.00 0.00 3.51
2898 3100 1.468054 GCCTTGTATCCTGCAAAAGCG 60.468 52.381 0.00 0.00 0.00 4.68
2899 3101 1.133025 CCTTGTATCCTGCAAAAGCGG 59.867 52.381 0.00 0.00 0.00 5.52
2900 3102 1.812571 CTTGTATCCTGCAAAAGCGGT 59.187 47.619 0.00 0.00 0.00 5.68
2901 3103 1.904287 TGTATCCTGCAAAAGCGGTT 58.096 45.000 0.00 0.00 0.00 4.44
2902 3104 1.539388 TGTATCCTGCAAAAGCGGTTG 59.461 47.619 0.00 0.00 0.00 3.77
2903 3105 1.135402 GTATCCTGCAAAAGCGGTTGG 60.135 52.381 0.00 0.00 0.00 3.77
2904 3106 2.158561 ATCCTGCAAAAGCGGTTGGC 62.159 55.000 15.03 15.03 44.05 4.52
2915 3117 3.728373 GGTTGGCGGGAGGGACAT 61.728 66.667 0.00 0.00 0.00 3.06
2916 3118 2.355115 GTTGGCGGGAGGGACATT 59.645 61.111 0.00 0.00 0.00 2.71
2917 3119 1.304134 GTTGGCGGGAGGGACATTT 60.304 57.895 0.00 0.00 0.00 2.32
2918 3120 1.001393 TTGGCGGGAGGGACATTTC 60.001 57.895 0.00 0.00 0.00 2.17
2919 3121 1.784301 TTGGCGGGAGGGACATTTCA 61.784 55.000 0.00 0.00 0.00 2.69
2920 3122 1.452108 GGCGGGAGGGACATTTCAG 60.452 63.158 0.00 0.00 0.00 3.02
2921 3123 2.115291 GCGGGAGGGACATTTCAGC 61.115 63.158 0.00 0.00 0.00 4.26
2922 3124 1.299648 CGGGAGGGACATTTCAGCA 59.700 57.895 0.00 0.00 0.00 4.41
2923 3125 0.107017 CGGGAGGGACATTTCAGCAT 60.107 55.000 0.00 0.00 0.00 3.79
2924 3126 1.396653 GGGAGGGACATTTCAGCATG 58.603 55.000 0.00 0.00 37.54 4.06
2925 3127 1.341383 GGGAGGGACATTTCAGCATGT 60.341 52.381 0.00 0.00 40.25 3.21
2926 3128 1.747355 GGAGGGACATTTCAGCATGTG 59.253 52.381 0.00 0.00 37.52 3.21
2927 3129 1.133790 GAGGGACATTTCAGCATGTGC 59.866 52.381 0.00 0.00 43.03 4.57
2928 3130 0.179156 GGGACATTTCAGCATGTGCG 60.179 55.000 0.00 0.00 44.30 5.34
2929 3131 2.817680 GGGACATTTCAGCATGTGCGT 61.818 52.381 0.00 0.00 44.30 5.24
2930 3132 4.282313 GGGACATTTCAGCATGTGCGTT 62.282 50.000 0.00 0.00 44.30 4.84
2937 3139 2.983030 GCATGTGCGTTCCCCACA 60.983 61.111 0.00 0.00 46.10 4.17
2940 3142 2.033448 TGTGCGTTCCCCACATCC 59.967 61.111 0.00 0.00 38.21 3.51
2941 3143 2.351276 GTGCGTTCCCCACATCCT 59.649 61.111 0.00 0.00 33.50 3.24
2942 3144 1.745489 GTGCGTTCCCCACATCCTC 60.745 63.158 0.00 0.00 33.50 3.71
2943 3145 1.918293 TGCGTTCCCCACATCCTCT 60.918 57.895 0.00 0.00 0.00 3.69
2944 3146 1.153349 GCGTTCCCCACATCCTCTC 60.153 63.158 0.00 0.00 0.00 3.20
2945 3147 1.522569 CGTTCCCCACATCCTCTCC 59.477 63.158 0.00 0.00 0.00 3.71
2946 3148 1.915983 GTTCCCCACATCCTCTCCC 59.084 63.158 0.00 0.00 0.00 4.30
2947 3149 1.689233 TTCCCCACATCCTCTCCCG 60.689 63.158 0.00 0.00 0.00 5.14
2948 3150 3.866582 CCCCACATCCTCTCCCGC 61.867 72.222 0.00 0.00 0.00 6.13
2949 3151 3.083349 CCCACATCCTCTCCCGCA 61.083 66.667 0.00 0.00 0.00 5.69
2950 3152 2.503061 CCACATCCTCTCCCGCAG 59.497 66.667 0.00 0.00 0.00 5.18
2951 3153 2.202987 CACATCCTCTCCCGCAGC 60.203 66.667 0.00 0.00 0.00 5.25
2952 3154 3.474570 ACATCCTCTCCCGCAGCC 61.475 66.667 0.00 0.00 0.00 4.85
2953 3155 4.598894 CATCCTCTCCCGCAGCCG 62.599 72.222 0.00 0.00 0.00 5.52
2994 3196 2.101770 GCAGCTTGCGATTCTGGC 59.898 61.111 5.75 0.00 31.71 4.85
2995 3197 2.796651 CAGCTTGCGATTCTGGCC 59.203 61.111 0.00 0.00 0.00 5.36
2996 3198 2.042259 CAGCTTGCGATTCTGGCCA 61.042 57.895 4.71 4.71 0.00 5.36
2997 3199 1.077212 AGCTTGCGATTCTGGCCAT 60.077 52.632 5.51 0.00 0.00 4.40
2998 3200 0.682209 AGCTTGCGATTCTGGCCATT 60.682 50.000 5.51 0.00 0.00 3.16
2999 3201 0.174162 GCTTGCGATTCTGGCCATTT 59.826 50.000 5.51 0.00 0.00 2.32
3000 3202 1.800286 GCTTGCGATTCTGGCCATTTC 60.800 52.381 5.51 2.42 0.00 2.17
3001 3203 0.817013 TTGCGATTCTGGCCATTTCC 59.183 50.000 5.51 0.00 0.00 3.13
3002 3204 0.323269 TGCGATTCTGGCCATTTCCA 60.323 50.000 5.51 1.72 34.42 3.53
3003 3205 0.101219 GCGATTCTGGCCATTTCCAC 59.899 55.000 5.51 0.00 31.74 4.02
3004 3206 0.740737 CGATTCTGGCCATTTCCACC 59.259 55.000 5.51 0.00 31.74 4.61
3005 3207 0.740737 GATTCTGGCCATTTCCACCG 59.259 55.000 5.51 0.00 31.74 4.94
3006 3208 0.331278 ATTCTGGCCATTTCCACCGA 59.669 50.000 5.51 0.00 31.74 4.69
3007 3209 0.608035 TTCTGGCCATTTCCACCGAC 60.608 55.000 5.51 0.00 31.74 4.79
3008 3210 2.359354 TGGCCATTTCCACCGACG 60.359 61.111 0.00 0.00 0.00 5.12
3009 3211 3.131478 GGCCATTTCCACCGACGG 61.131 66.667 13.61 13.61 0.00 4.79
3010 3212 2.046700 GCCATTTCCACCGACGGA 60.047 61.111 23.38 0.00 0.00 4.69
3011 3213 1.673009 GCCATTTCCACCGACGGAA 60.673 57.895 23.38 4.26 43.43 4.30
3012 3214 1.029947 GCCATTTCCACCGACGGAAT 61.030 55.000 23.38 6.82 44.49 3.01
3013 3215 1.014352 CCATTTCCACCGACGGAATC 58.986 55.000 23.38 0.00 44.49 2.52
3014 3216 1.677518 CCATTTCCACCGACGGAATCA 60.678 52.381 23.38 0.05 44.49 2.57
3015 3217 1.396996 CATTTCCACCGACGGAATCAC 59.603 52.381 23.38 0.00 44.49 3.06
3016 3218 0.668096 TTTCCACCGACGGAATCACG 60.668 55.000 23.38 1.17 44.49 4.35
3017 3219 3.186047 CCACCGACGGAATCACGC 61.186 66.667 23.38 0.00 37.37 5.34
3018 3220 3.186047 CACCGACGGAATCACGCC 61.186 66.667 23.38 0.00 37.37 5.68
3039 3241 4.778143 GGGCCGCACTACACCCTG 62.778 72.222 0.00 0.00 39.42 4.45
3040 3242 4.778143 GGCCGCACTACACCCTGG 62.778 72.222 0.00 0.00 0.00 4.45
3041 3243 4.016706 GCCGCACTACACCCTGGT 62.017 66.667 0.00 0.00 0.00 4.00
3042 3244 2.264794 CCGCACTACACCCTGGTC 59.735 66.667 0.00 0.00 0.00 4.02
3043 3245 2.264794 CGCACTACACCCTGGTCC 59.735 66.667 0.00 0.00 0.00 4.46
3044 3246 2.579657 CGCACTACACCCTGGTCCA 61.580 63.158 0.00 0.00 0.00 4.02
3045 3247 1.003718 GCACTACACCCTGGTCCAC 60.004 63.158 0.00 0.00 0.00 4.02
3046 3248 1.481056 GCACTACACCCTGGTCCACT 61.481 60.000 0.00 0.00 0.00 4.00
3047 3249 0.608640 CACTACACCCTGGTCCACTC 59.391 60.000 0.00 0.00 0.00 3.51
3048 3250 0.898789 ACTACACCCTGGTCCACTCG 60.899 60.000 0.00 0.00 0.00 4.18
3049 3251 2.227089 CTACACCCTGGTCCACTCGC 62.227 65.000 0.00 0.00 0.00 5.03
3050 3252 4.394712 CACCCTGGTCCACTCGCC 62.395 72.222 0.00 0.00 0.00 5.54
3082 3284 4.157120 CCACCACCCCGGATCGAC 62.157 72.222 0.73 0.00 38.63 4.20
3083 3285 4.157120 CACCACCCCGGATCGACC 62.157 72.222 0.73 0.00 38.63 4.79
3095 3297 3.872728 TCGACCGCCATCGAGTCG 61.873 66.667 15.62 15.62 45.84 4.18
3096 3298 4.175489 CGACCGCCATCGAGTCGT 62.175 66.667 13.12 0.00 45.35 4.34
3097 3299 2.181021 GACCGCCATCGAGTCGTT 59.819 61.111 13.12 0.41 38.10 3.85
3098 3300 2.126071 ACCGCCATCGAGTCGTTG 60.126 61.111 13.12 14.30 38.10 4.10
3099 3301 3.554692 CCGCCATCGAGTCGTTGC 61.555 66.667 16.46 13.89 38.10 4.17
3100 3302 3.554692 CGCCATCGAGTCGTTGCC 61.555 66.667 16.46 6.32 38.10 4.52
3101 3303 3.195698 GCCATCGAGTCGTTGCCC 61.196 66.667 16.46 7.25 0.00 5.36
3102 3304 2.885644 CCATCGAGTCGTTGCCCG 60.886 66.667 16.46 1.77 38.13 6.13
3103 3305 3.554692 CATCGAGTCGTTGCCCGC 61.555 66.667 13.12 0.00 36.19 6.13
3104 3306 4.814294 ATCGAGTCGTTGCCCGCC 62.814 66.667 13.12 0.00 36.19 6.13
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
66 67 1.660560 CCAGCATCTTTTCCGCCAGG 61.661 60.000 0.00 0.00 39.46 4.45
221 222 6.313905 ACACCAAGCTGAGATAACGAAATAAG 59.686 38.462 0.00 0.00 0.00 1.73
244 245 2.313643 TCTAGGTACCATCACCAGGACA 59.686 50.000 15.94 0.00 41.40 4.02
313 314 6.303054 TCAAGAGAGTGAAAGAAGAGAGAGA 58.697 40.000 0.00 0.00 0.00 3.10
314 315 6.573664 TCAAGAGAGTGAAAGAAGAGAGAG 57.426 41.667 0.00 0.00 0.00 3.20
439 446 8.398665 GCAACTACTCTCTCAAAAAGAAAAGAA 58.601 33.333 0.00 0.00 32.23 2.52
441 448 7.924940 AGCAACTACTCTCTCAAAAAGAAAAG 58.075 34.615 0.00 0.00 32.23 2.27
485 492 1.134699 TGCAGGTAGATGAAGCCTTCG 60.135 52.381 0.00 0.00 0.00 3.79
529 536 4.260702 CGACCTAGACTTATTCACCGAGAC 60.261 50.000 0.00 0.00 0.00 3.36
531 538 3.003482 CCGACCTAGACTTATTCACCGAG 59.997 52.174 0.00 0.00 0.00 4.63
532 539 2.947652 CCGACCTAGACTTATTCACCGA 59.052 50.000 0.00 0.00 0.00 4.69
534 541 2.543238 CGCCGACCTAGACTTATTCACC 60.543 54.545 0.00 0.00 0.00 4.02
535 542 2.357009 TCGCCGACCTAGACTTATTCAC 59.643 50.000 0.00 0.00 0.00 3.18
675 713 9.583765 CCTAAACAAAACAGTACTACCTCTATC 57.416 37.037 0.00 0.00 0.00 2.08
679 717 7.330454 GCTACCTAAACAAAACAGTACTACCTC 59.670 40.741 0.00 0.00 0.00 3.85
682 720 6.863126 TCGCTACCTAAACAAAACAGTACTAC 59.137 38.462 0.00 0.00 0.00 2.73
684 722 5.846203 TCGCTACCTAAACAAAACAGTACT 58.154 37.500 0.00 0.00 0.00 2.73
686 724 5.846203 ACTCGCTACCTAAACAAAACAGTA 58.154 37.500 0.00 0.00 0.00 2.74
687 725 4.700700 ACTCGCTACCTAAACAAAACAGT 58.299 39.130 0.00 0.00 0.00 3.55
688 726 6.154445 TCTACTCGCTACCTAAACAAAACAG 58.846 40.000 0.00 0.00 0.00 3.16
689 727 6.016024 TCTCTACTCGCTACCTAAACAAAACA 60.016 38.462 0.00 0.00 0.00 2.83
692 789 5.392811 GCTCTCTACTCGCTACCTAAACAAA 60.393 44.000 0.00 0.00 0.00 2.83
708 805 2.223525 ACGGCGTCAATTAGCTCTCTAC 60.224 50.000 6.77 0.00 0.00 2.59
724 821 3.039202 GACTGGGAAATGCACGGCG 62.039 63.158 4.80 4.80 0.00 6.46
751 848 3.431912 TGTCGTTTCACGGAGATGATTTG 59.568 43.478 0.00 0.00 42.81 2.32
980 1090 3.231818 AGAGACGAAAGAGGAAGGAACA 58.768 45.455 0.00 0.00 0.00 3.18
981 1091 3.945981 AGAGACGAAAGAGGAAGGAAC 57.054 47.619 0.00 0.00 0.00 3.62
983 1093 4.030314 TGTAGAGACGAAAGAGGAAGGA 57.970 45.455 0.00 0.00 0.00 3.36
984 1094 4.993029 ATGTAGAGACGAAAGAGGAAGG 57.007 45.455 0.00 0.00 0.00 3.46
985 1095 7.171167 TCGTATATGTAGAGACGAAAGAGGAAG 59.829 40.741 0.00 0.00 41.04 3.46
996 1106 5.333952 CGTGAAGGGTCGTATATGTAGAGAC 60.334 48.000 0.00 0.00 0.00 3.36
1185 1295 1.162698 AGAGAGCACACGCGTACTAA 58.837 50.000 13.44 0.00 45.49 2.24
1186 1296 1.135774 CAAGAGAGCACACGCGTACTA 60.136 52.381 13.44 0.00 45.49 1.82
1649 1762 7.379529 ACGAAAACTTTAGATTGCTTGATGTTG 59.620 33.333 0.00 0.00 0.00 3.33
1723 1868 3.758023 CCTTTGGCATCAACATGTACAGA 59.242 43.478 0.00 0.00 31.78 3.41
1729 1874 2.296752 TCACACCTTTGGCATCAACATG 59.703 45.455 0.00 0.00 31.78 3.21
2084 2232 1.248785 GCCGTGTGGTCTCTAGGTGA 61.249 60.000 0.00 0.00 37.67 4.02
2099 2247 0.317479 GCGATGGTATCTTAGGCCGT 59.683 55.000 0.00 0.00 0.00 5.68
2124 2274 8.214472 CGTACACGCGTAGATTTACTATTACTA 58.786 37.037 13.44 0.00 33.39 1.82
2127 2277 7.172654 TCGTACACGCGTAGATTTACTATTA 57.827 36.000 13.44 0.00 39.60 0.98
2207 2407 7.974504 AGGAACAAAGGAAGTACTTCATAAGA 58.025 34.615 31.30 0.00 41.20 2.10
2208 2408 9.720769 TTAGGAACAAAGGAAGTACTTCATAAG 57.279 33.333 31.30 23.03 41.20 1.73
2221 2421 9.667107 CACAGACTTATATTTAGGAACAAAGGA 57.333 33.333 0.00 0.00 0.00 3.36
2222 2422 8.893727 CCACAGACTTATATTTAGGAACAAAGG 58.106 37.037 0.00 0.00 0.00 3.11
2223 2423 9.667107 TCCACAGACTTATATTTAGGAACAAAG 57.333 33.333 0.00 0.00 0.00 2.77
2224 2424 9.667107 CTCCACAGACTTATATTTAGGAACAAA 57.333 33.333 0.00 0.00 0.00 2.83
2225 2425 9.042450 TCTCCACAGACTTATATTTAGGAACAA 57.958 33.333 0.00 0.00 0.00 2.83
2226 2426 8.603898 TCTCCACAGACTTATATTTAGGAACA 57.396 34.615 0.00 0.00 0.00 3.18
2227 2427 8.915036 TCTCTCCACAGACTTATATTTAGGAAC 58.085 37.037 0.00 0.00 0.00 3.62
2228 2428 9.661954 ATCTCTCCACAGACTTATATTTAGGAA 57.338 33.333 0.00 0.00 0.00 3.36
2229 2429 9.661954 AATCTCTCCACAGACTTATATTTAGGA 57.338 33.333 0.00 0.00 0.00 2.94
2233 2433 9.606631 GTGAAATCTCTCCACAGACTTATATTT 57.393 33.333 0.00 0.00 0.00 1.40
2234 2434 8.986991 AGTGAAATCTCTCCACAGACTTATATT 58.013 33.333 0.00 0.00 33.53 1.28
2235 2435 8.546083 AGTGAAATCTCTCCACAGACTTATAT 57.454 34.615 0.00 0.00 33.53 0.86
2236 2436 7.962995 AGTGAAATCTCTCCACAGACTTATA 57.037 36.000 0.00 0.00 33.53 0.98
2237 2437 6.865834 AGTGAAATCTCTCCACAGACTTAT 57.134 37.500 0.00 0.00 33.53 1.73
2238 2438 7.615757 TCATAGTGAAATCTCTCCACAGACTTA 59.384 37.037 0.00 0.00 33.53 2.24
2239 2439 6.438741 TCATAGTGAAATCTCTCCACAGACTT 59.561 38.462 0.00 0.00 33.53 3.01
2240 2440 5.954752 TCATAGTGAAATCTCTCCACAGACT 59.045 40.000 0.00 0.00 33.53 3.24
2241 2441 6.214191 TCATAGTGAAATCTCTCCACAGAC 57.786 41.667 0.00 0.00 33.53 3.51
2242 2442 6.351371 GGTTCATAGTGAAATCTCTCCACAGA 60.351 42.308 0.00 0.00 38.22 3.41
2243 2443 5.814705 GGTTCATAGTGAAATCTCTCCACAG 59.185 44.000 0.00 0.00 38.22 3.66
2244 2444 5.248248 TGGTTCATAGTGAAATCTCTCCACA 59.752 40.000 0.00 0.00 38.22 4.17
2245 2445 5.582665 GTGGTTCATAGTGAAATCTCTCCAC 59.417 44.000 10.26 10.26 38.22 4.02
2246 2446 5.248248 TGTGGTTCATAGTGAAATCTCTCCA 59.752 40.000 0.00 0.00 38.22 3.86
2247 2447 5.734720 TGTGGTTCATAGTGAAATCTCTCC 58.265 41.667 0.00 0.00 38.22 3.71
2248 2448 8.986847 CATATGTGGTTCATAGTGAAATCTCTC 58.013 37.037 0.00 0.00 41.55 3.20
2249 2449 7.935755 CCATATGTGGTTCATAGTGAAATCTCT 59.064 37.037 0.00 0.00 41.55 3.10
2250 2450 7.933577 TCCATATGTGGTTCATAGTGAAATCTC 59.066 37.037 8.51 0.00 46.16 2.75
2251 2451 7.805163 TCCATATGTGGTTCATAGTGAAATCT 58.195 34.615 8.51 0.00 46.16 2.40
2252 2452 8.509690 CATCCATATGTGGTTCATAGTGAAATC 58.490 37.037 8.51 0.00 46.16 2.17
2253 2453 8.000709 ACATCCATATGTGGTTCATAGTGAAAT 58.999 33.333 8.51 0.00 44.79 2.17
2254 2454 7.345691 ACATCCATATGTGGTTCATAGTGAAA 58.654 34.615 8.51 0.00 44.79 2.69
2255 2455 6.899089 ACATCCATATGTGGTTCATAGTGAA 58.101 36.000 8.51 0.00 44.79 3.18
2256 2456 6.499106 ACATCCATATGTGGTTCATAGTGA 57.501 37.500 8.51 0.00 44.79 3.41
2257 2457 7.879677 ACATACATCCATATGTGGTTCATAGTG 59.120 37.037 8.51 3.59 45.99 2.74
2258 2458 7.977818 ACATACATCCATATGTGGTTCATAGT 58.022 34.615 8.51 0.15 45.99 2.12
2259 2459 9.591792 CTACATACATCCATATGTGGTTCATAG 57.408 37.037 8.51 0.00 45.99 2.23
2260 2460 9.320295 TCTACATACATCCATATGTGGTTCATA 57.680 33.333 8.51 0.00 45.99 2.15
2261 2461 8.206126 TCTACATACATCCATATGTGGTTCAT 57.794 34.615 8.51 0.00 45.99 2.57
2262 2462 7.610580 TCTACATACATCCATATGTGGTTCA 57.389 36.000 8.51 0.00 45.99 3.18
2263 2463 7.065085 GCATCTACATACATCCATATGTGGTTC 59.935 40.741 8.51 0.00 45.99 3.62
2264 2464 6.881065 GCATCTACATACATCCATATGTGGTT 59.119 38.462 8.51 0.00 45.99 3.67
2265 2465 6.013466 TGCATCTACATACATCCATATGTGGT 60.013 38.462 8.51 0.00 45.99 4.16
2266 2466 6.408869 TGCATCTACATACATCCATATGTGG 58.591 40.000 1.19 1.19 45.99 4.17
2267 2467 8.502105 AATGCATCTACATACATCCATATGTG 57.498 34.615 0.00 0.00 45.99 3.21
2273 2473 9.407380 ACTTTAAAATGCATCTACATACATCCA 57.593 29.630 0.00 0.00 0.00 3.41
2274 2474 9.669353 CACTTTAAAATGCATCTACATACATCC 57.331 33.333 0.00 0.00 0.00 3.51
2298 2498 5.446473 CGGAGCAAAATGAGTGAATCTACAC 60.446 44.000 0.00 0.00 40.60 2.90
2299 2499 4.631377 CGGAGCAAAATGAGTGAATCTACA 59.369 41.667 0.00 0.00 0.00 2.74
2300 2500 4.631813 ACGGAGCAAAATGAGTGAATCTAC 59.368 41.667 0.00 0.00 0.00 2.59
2301 2501 4.832248 ACGGAGCAAAATGAGTGAATCTA 58.168 39.130 0.00 0.00 0.00 1.98
2302 2502 3.679389 ACGGAGCAAAATGAGTGAATCT 58.321 40.909 0.00 0.00 0.00 2.40
2303 2503 5.741388 ATACGGAGCAAAATGAGTGAATC 57.259 39.130 0.00 0.00 0.00 2.52
2304 2504 8.150945 ACTATATACGGAGCAAAATGAGTGAAT 58.849 33.333 0.00 0.00 0.00 2.57
2305 2505 7.497595 ACTATATACGGAGCAAAATGAGTGAA 58.502 34.615 0.00 0.00 0.00 3.18
2306 2506 7.050970 ACTATATACGGAGCAAAATGAGTGA 57.949 36.000 0.00 0.00 0.00 3.41
2307 2507 6.366332 GGACTATATACGGAGCAAAATGAGTG 59.634 42.308 0.00 0.00 0.00 3.51
2308 2508 6.041637 TGGACTATATACGGAGCAAAATGAGT 59.958 38.462 0.00 0.00 0.00 3.41
2309 2509 6.455647 TGGACTATATACGGAGCAAAATGAG 58.544 40.000 0.00 0.00 0.00 2.90
2310 2510 6.413783 TGGACTATATACGGAGCAAAATGA 57.586 37.500 0.00 0.00 0.00 2.57
2311 2511 8.035394 ACTATGGACTATATACGGAGCAAAATG 58.965 37.037 0.00 0.00 0.00 2.32
2312 2512 8.035394 CACTATGGACTATATACGGAGCAAAAT 58.965 37.037 0.00 0.00 0.00 1.82
2313 2513 7.231925 TCACTATGGACTATATACGGAGCAAAA 59.768 37.037 0.00 0.00 0.00 2.44
2314 2514 6.717997 TCACTATGGACTATATACGGAGCAAA 59.282 38.462 0.00 0.00 0.00 3.68
2315 2515 6.243148 TCACTATGGACTATATACGGAGCAA 58.757 40.000 0.00 0.00 0.00 3.91
2316 2516 5.812286 TCACTATGGACTATATACGGAGCA 58.188 41.667 0.00 0.00 0.00 4.26
2317 2517 6.754702 TTCACTATGGACTATATACGGAGC 57.245 41.667 0.00 0.00 0.00 4.70
2318 2518 9.179909 AGATTTCACTATGGACTATATACGGAG 57.820 37.037 0.00 0.00 0.00 4.63
2319 2519 9.175312 GAGATTTCACTATGGACTATATACGGA 57.825 37.037 0.00 0.00 0.00 4.69
2320 2520 9.179909 AGAGATTTCACTATGGACTATATACGG 57.820 37.037 0.00 0.00 0.00 4.02
2327 2527 8.696374 CCTTTGTAGAGATTTCACTATGGACTA 58.304 37.037 0.00 0.00 0.00 2.59
2328 2528 7.560368 CCTTTGTAGAGATTTCACTATGGACT 58.440 38.462 0.00 0.00 0.00 3.85
2329 2529 6.258947 GCCTTTGTAGAGATTTCACTATGGAC 59.741 42.308 0.00 0.00 0.00 4.02
2330 2530 6.156949 AGCCTTTGTAGAGATTTCACTATGGA 59.843 38.462 0.00 0.00 0.00 3.41
2331 2531 6.352516 AGCCTTTGTAGAGATTTCACTATGG 58.647 40.000 0.00 0.00 0.00 2.74
2332 2532 7.856145 AAGCCTTTGTAGAGATTTCACTATG 57.144 36.000 0.00 0.00 0.00 2.23
2343 2543 8.979574 CGTTCCTAAATATAAGCCTTTGTAGAG 58.020 37.037 0.00 0.00 0.00 2.43
2344 2544 7.929785 CCGTTCCTAAATATAAGCCTTTGTAGA 59.070 37.037 0.00 0.00 0.00 2.59
2345 2545 7.929785 TCCGTTCCTAAATATAAGCCTTTGTAG 59.070 37.037 0.00 0.00 0.00 2.74
2346 2546 7.794041 TCCGTTCCTAAATATAAGCCTTTGTA 58.206 34.615 0.00 0.00 0.00 2.41
2347 2547 6.655930 TCCGTTCCTAAATATAAGCCTTTGT 58.344 36.000 0.00 0.00 0.00 2.83
2348 2548 6.204882 CCTCCGTTCCTAAATATAAGCCTTTG 59.795 42.308 0.00 0.00 0.00 2.77
2349 2549 6.296803 CCTCCGTTCCTAAATATAAGCCTTT 58.703 40.000 0.00 0.00 0.00 3.11
2350 2550 5.221864 CCCTCCGTTCCTAAATATAAGCCTT 60.222 44.000 0.00 0.00 0.00 4.35
2351 2551 4.286291 CCCTCCGTTCCTAAATATAAGCCT 59.714 45.833 0.00 0.00 0.00 4.58
2352 2552 4.285260 TCCCTCCGTTCCTAAATATAAGCC 59.715 45.833 0.00 0.00 0.00 4.35
2353 2553 5.011840 ACTCCCTCCGTTCCTAAATATAAGC 59.988 44.000 0.00 0.00 0.00 3.09
2354 2554 6.667558 ACTCCCTCCGTTCCTAAATATAAG 57.332 41.667 0.00 0.00 0.00 1.73
2355 2555 8.731591 ATTACTCCCTCCGTTCCTAAATATAA 57.268 34.615 0.00 0.00 0.00 0.98
2357 2557 8.912614 ATATTACTCCCTCCGTTCCTAAATAT 57.087 34.615 0.00 0.00 0.00 1.28
2358 2558 9.827198 TTATATTACTCCCTCCGTTCCTAAATA 57.173 33.333 0.00 0.00 0.00 1.40
2359 2559 8.731591 TTATATTACTCCCTCCGTTCCTAAAT 57.268 34.615 0.00 0.00 0.00 1.40
2360 2560 8.424133 GTTTATATTACTCCCTCCGTTCCTAAA 58.576 37.037 0.00 0.00 0.00 1.85
2361 2561 7.786464 AGTTTATATTACTCCCTCCGTTCCTAA 59.214 37.037 0.00 0.00 0.00 2.69
2362 2562 7.300658 AGTTTATATTACTCCCTCCGTTCCTA 58.699 38.462 0.00 0.00 0.00 2.94
2363 2563 6.141790 AGTTTATATTACTCCCTCCGTTCCT 58.858 40.000 0.00 0.00 0.00 3.36
2364 2564 6.416631 AGTTTATATTACTCCCTCCGTTCC 57.583 41.667 0.00 0.00 0.00 3.62
2365 2565 7.270779 ACAAGTTTATATTACTCCCTCCGTTC 58.729 38.462 0.00 0.00 0.00 3.95
2366 2566 7.191593 ACAAGTTTATATTACTCCCTCCGTT 57.808 36.000 0.00 0.00 0.00 4.44
2367 2567 6.803366 ACAAGTTTATATTACTCCCTCCGT 57.197 37.500 0.00 0.00 0.00 4.69
2368 2568 6.018180 GCAACAAGTTTATATTACTCCCTCCG 60.018 42.308 0.00 0.00 0.00 4.63
2369 2569 6.262496 GGCAACAAGTTTATATTACTCCCTCC 59.738 42.308 0.00 0.00 0.00 4.30
2370 2570 7.260558 GGCAACAAGTTTATATTACTCCCTC 57.739 40.000 0.00 0.00 0.00 4.30
2388 2588 4.378774 CTTTCACCATGAAATTGGCAACA 58.621 39.130 0.00 0.00 44.37 3.33
2416 2616 7.286215 TCCGGAAAACCTCTCATAGTAATAG 57.714 40.000 0.00 0.00 0.00 1.73
2428 2628 6.990349 TCATATTACTTCATCCGGAAAACCTC 59.010 38.462 9.01 0.00 34.44 3.85
2429 2629 6.895782 TCATATTACTTCATCCGGAAAACCT 58.104 36.000 9.01 0.00 34.44 3.50
2430 2630 6.293462 GCTCATATTACTTCATCCGGAAAACC 60.293 42.308 9.01 0.00 34.44 3.27
2431 2631 6.483640 AGCTCATATTACTTCATCCGGAAAAC 59.516 38.462 9.01 0.00 34.44 2.43
2436 2638 4.169508 CGAGCTCATATTACTTCATCCGG 58.830 47.826 15.40 0.00 0.00 5.14
2439 2641 5.910315 GCAACGAGCTCATATTACTTCATC 58.090 41.667 15.40 0.00 41.15 2.92
2464 2666 6.968263 TGCTAAGAGATGCTCTACAGTATT 57.032 37.500 0.00 0.00 40.28 1.89
2465 2667 6.493115 ACATGCTAAGAGATGCTCTACAGTAT 59.507 38.462 0.00 1.61 40.28 2.12
2468 2670 5.199024 ACATGCTAAGAGATGCTCTACAG 57.801 43.478 0.00 0.41 40.28 2.74
2474 2676 5.657826 ATATCGACATGCTAAGAGATGCT 57.342 39.130 0.00 0.00 0.00 3.79
2475 2677 6.718454 AAATATCGACATGCTAAGAGATGC 57.282 37.500 0.00 0.00 0.00 3.91
2483 2685 5.222079 TGCCCTAAAATATCGACATGCTA 57.778 39.130 0.00 0.00 0.00 3.49
2486 2688 5.934043 TGAGATGCCCTAAAATATCGACATG 59.066 40.000 0.00 0.00 0.00 3.21
2493 2695 8.766994 TTAGCTTTTGAGATGCCCTAAAATAT 57.233 30.769 0.00 0.00 0.00 1.28
2494 2696 8.766994 ATTAGCTTTTGAGATGCCCTAAAATA 57.233 30.769 0.00 0.00 0.00 1.40
2500 2702 3.950395 GTGATTAGCTTTTGAGATGCCCT 59.050 43.478 0.00 0.00 0.00 5.19
2510 2712 7.669427 TGATGTTCATTTGGTGATTAGCTTTT 58.331 30.769 0.00 0.00 36.54 2.27
2513 2715 6.604396 TGATGATGTTCATTTGGTGATTAGCT 59.396 34.615 0.00 0.00 37.20 3.32
2529 2731 5.072055 TGTCTGTGGACATTTGATGATGTT 58.928 37.500 0.00 0.00 46.19 2.71
2542 2744 0.674895 GCCAGGACATGTCTGTGGAC 60.675 60.000 34.01 25.35 42.42 4.02
2555 2757 1.204704 CAGTTCGTAGACATGCCAGGA 59.795 52.381 0.00 0.00 34.32 3.86
2558 2760 1.262417 TCCAGTTCGTAGACATGCCA 58.738 50.000 0.00 0.00 34.32 4.92
2567 2769 6.993902 ACCTAATTTCAAGTTTCCAGTTCGTA 59.006 34.615 0.00 0.00 0.00 3.43
2574 2776 4.219115 TGGCACCTAATTTCAAGTTTCCA 58.781 39.130 0.00 0.00 0.00 3.53
2577 2779 4.616953 CGTTGGCACCTAATTTCAAGTTT 58.383 39.130 0.00 0.00 0.00 2.66
2578 2780 3.552068 GCGTTGGCACCTAATTTCAAGTT 60.552 43.478 0.00 0.00 39.62 2.66
2579 2781 2.030274 GCGTTGGCACCTAATTTCAAGT 60.030 45.455 0.00 0.00 39.62 3.16
2582 2784 1.610363 TGCGTTGGCACCTAATTTCA 58.390 45.000 0.00 0.00 46.21 2.69
2599 2801 1.687494 GAGATTGTCGCGTCTGGTGC 61.687 60.000 5.77 0.00 0.00 5.01
2604 2806 1.474478 AGTGATGAGATTGTCGCGTCT 59.526 47.619 5.77 0.06 34.04 4.18
2608 2810 2.610433 TGTGAGTGATGAGATTGTCGC 58.390 47.619 0.00 0.00 0.00 5.19
2638 2840 0.904865 TCTCCCGTGAACATCAGGCT 60.905 55.000 0.00 0.00 31.43 4.58
2651 2853 0.895530 TACTGCCTTTCACTCTCCCG 59.104 55.000 0.00 0.00 0.00 5.14
2672 2874 4.576053 CGATGAATCATTGAGGTTTGGCTA 59.424 41.667 4.46 0.00 0.00 3.93
2674 2876 3.378112 TCGATGAATCATTGAGGTTTGGC 59.622 43.478 9.03 0.00 31.41 4.52
2684 2886 5.638657 GCTAGAGATGCTTCGATGAATCATT 59.361 40.000 18.78 10.18 30.10 2.57
2690 2892 3.004210 GTCTGCTAGAGATGCTTCGATGA 59.996 47.826 1.89 0.00 31.63 2.92
2694 2896 1.406898 TGGTCTGCTAGAGATGCTTCG 59.593 52.381 0.00 0.00 31.63 3.79
2695 2897 2.430332 AGTGGTCTGCTAGAGATGCTTC 59.570 50.000 0.00 0.00 31.63 3.86
2697 2899 2.157640 AGTGGTCTGCTAGAGATGCT 57.842 50.000 0.00 0.00 31.63 3.79
2698 2900 2.977772 AAGTGGTCTGCTAGAGATGC 57.022 50.000 0.00 0.00 31.63 3.91
2699 2901 7.312154 GTGATATAAGTGGTCTGCTAGAGATG 58.688 42.308 0.00 0.00 31.63 2.90
2700 2902 6.435904 GGTGATATAAGTGGTCTGCTAGAGAT 59.564 42.308 0.00 0.00 31.63 2.75
2701 2903 5.770663 GGTGATATAAGTGGTCTGCTAGAGA 59.229 44.000 0.00 0.00 0.00 3.10
2702 2904 5.047660 GGGTGATATAAGTGGTCTGCTAGAG 60.048 48.000 0.00 0.00 0.00 2.43
2703 2905 4.833380 GGGTGATATAAGTGGTCTGCTAGA 59.167 45.833 0.00 0.00 0.00 2.43
2704 2906 4.021016 GGGGTGATATAAGTGGTCTGCTAG 60.021 50.000 0.00 0.00 0.00 3.42
2705 2907 3.901844 GGGGTGATATAAGTGGTCTGCTA 59.098 47.826 0.00 0.00 0.00 3.49
2706 2908 2.706190 GGGGTGATATAAGTGGTCTGCT 59.294 50.000 0.00 0.00 0.00 4.24
2707 2909 2.548067 CGGGGTGATATAAGTGGTCTGC 60.548 54.545 0.00 0.00 0.00 4.26
2708 2910 2.963101 TCGGGGTGATATAAGTGGTCTG 59.037 50.000 0.00 0.00 0.00 3.51
2709 2911 2.963782 GTCGGGGTGATATAAGTGGTCT 59.036 50.000 0.00 0.00 0.00 3.85
2710 2912 2.696707 TGTCGGGGTGATATAAGTGGTC 59.303 50.000 0.00 0.00 0.00 4.02
2711 2913 2.433239 GTGTCGGGGTGATATAAGTGGT 59.567 50.000 0.00 0.00 0.00 4.16
2712 2914 2.432874 TGTGTCGGGGTGATATAAGTGG 59.567 50.000 0.00 0.00 0.00 4.00
2713 2915 3.812156 TGTGTCGGGGTGATATAAGTG 57.188 47.619 0.00 0.00 0.00 3.16
2714 2916 6.488769 TTTATGTGTCGGGGTGATATAAGT 57.511 37.500 0.00 0.00 0.00 2.24
2715 2917 7.979444 ATTTTATGTGTCGGGGTGATATAAG 57.021 36.000 0.00 0.00 0.00 1.73
2717 2919 9.661563 GATTATTTTATGTGTCGGGGTGATATA 57.338 33.333 0.00 0.00 0.00 0.86
2718 2920 7.333423 CGATTATTTTATGTGTCGGGGTGATAT 59.667 37.037 0.00 0.00 0.00 1.63
2719 2921 6.647481 CGATTATTTTATGTGTCGGGGTGATA 59.353 38.462 0.00 0.00 0.00 2.15
2720 2922 5.468746 CGATTATTTTATGTGTCGGGGTGAT 59.531 40.000 0.00 0.00 0.00 3.06
2721 2923 4.812091 CGATTATTTTATGTGTCGGGGTGA 59.188 41.667 0.00 0.00 0.00 4.02
2722 2924 4.573201 ACGATTATTTTATGTGTCGGGGTG 59.427 41.667 0.00 0.00 33.75 4.61
2723 2925 4.773013 ACGATTATTTTATGTGTCGGGGT 58.227 39.130 0.00 0.00 33.75 4.95
2724 2926 4.812091 TGACGATTATTTTATGTGTCGGGG 59.188 41.667 0.00 0.00 33.75 5.73
2725 2927 5.522460 ACTGACGATTATTTTATGTGTCGGG 59.478 40.000 0.00 0.00 35.97 5.14
2726 2928 6.583912 ACTGACGATTATTTTATGTGTCGG 57.416 37.500 0.00 0.00 37.30 4.79
2727 2929 8.588789 TGTAACTGACGATTATTTTATGTGTCG 58.411 33.333 0.00 0.00 35.42 4.35
2728 2930 9.901724 CTGTAACTGACGATTATTTTATGTGTC 57.098 33.333 0.00 0.00 0.00 3.67
2729 2931 9.431887 ACTGTAACTGACGATTATTTTATGTGT 57.568 29.630 0.00 0.00 0.00 3.72
2734 2936 8.231837 GCCAAACTGTAACTGACGATTATTTTA 58.768 33.333 0.00 0.00 0.00 1.52
2735 2937 7.081976 GCCAAACTGTAACTGACGATTATTTT 58.918 34.615 0.00 0.00 0.00 1.82
2736 2938 6.205853 TGCCAAACTGTAACTGACGATTATTT 59.794 34.615 0.00 0.00 0.00 1.40
2737 2939 5.703592 TGCCAAACTGTAACTGACGATTATT 59.296 36.000 0.00 0.00 0.00 1.40
2738 2940 5.242434 TGCCAAACTGTAACTGACGATTAT 58.758 37.500 0.00 0.00 0.00 1.28
2739 2941 4.633175 TGCCAAACTGTAACTGACGATTA 58.367 39.130 0.00 0.00 0.00 1.75
2740 2942 3.472652 TGCCAAACTGTAACTGACGATT 58.527 40.909 0.00 0.00 0.00 3.34
2741 2943 3.120321 TGCCAAACTGTAACTGACGAT 57.880 42.857 0.00 0.00 0.00 3.73
2742 2944 2.605837 TGCCAAACTGTAACTGACGA 57.394 45.000 0.00 0.00 0.00 4.20
2743 2945 2.805671 TCATGCCAAACTGTAACTGACG 59.194 45.455 0.00 0.00 0.00 4.35
2744 2946 4.829064 TTCATGCCAAACTGTAACTGAC 57.171 40.909 0.00 0.00 0.00 3.51
2745 2947 5.843673 TTTTCATGCCAAACTGTAACTGA 57.156 34.783 0.00 0.00 0.00 3.41
2765 2967 2.621526 GGTGTCTGTTCGGGTCATTTTT 59.378 45.455 0.00 0.00 0.00 1.94
2766 2968 2.227194 GGTGTCTGTTCGGGTCATTTT 58.773 47.619 0.00 0.00 0.00 1.82
2767 2969 1.142060 TGGTGTCTGTTCGGGTCATTT 59.858 47.619 0.00 0.00 0.00 2.32
2768 2970 0.762418 TGGTGTCTGTTCGGGTCATT 59.238 50.000 0.00 0.00 0.00 2.57
2769 2971 0.984230 ATGGTGTCTGTTCGGGTCAT 59.016 50.000 0.00 0.00 0.00 3.06
2770 2972 1.634960 TATGGTGTCTGTTCGGGTCA 58.365 50.000 0.00 0.00 0.00 4.02
2771 2973 2.740447 GTTTATGGTGTCTGTTCGGGTC 59.260 50.000 0.00 0.00 0.00 4.46
2772 2974 2.774687 GTTTATGGTGTCTGTTCGGGT 58.225 47.619 0.00 0.00 0.00 5.28
2773 2975 1.730064 CGTTTATGGTGTCTGTTCGGG 59.270 52.381 0.00 0.00 0.00 5.14
2774 2976 1.127951 GCGTTTATGGTGTCTGTTCGG 59.872 52.381 0.00 0.00 0.00 4.30
2775 2977 1.201769 CGCGTTTATGGTGTCTGTTCG 60.202 52.381 0.00 0.00 0.00 3.95
2776 2978 1.463528 GCGCGTTTATGGTGTCTGTTC 60.464 52.381 8.43 0.00 0.00 3.18
2777 2979 0.515564 GCGCGTTTATGGTGTCTGTT 59.484 50.000 8.43 0.00 0.00 3.16
2778 2980 0.601576 TGCGCGTTTATGGTGTCTGT 60.602 50.000 8.43 0.00 0.00 3.41
2779 2981 0.179225 GTGCGCGTTTATGGTGTCTG 60.179 55.000 8.43 0.00 0.00 3.51
2780 2982 1.623081 CGTGCGCGTTTATGGTGTCT 61.623 55.000 12.43 0.00 0.00 3.41
2781 2983 1.225637 CGTGCGCGTTTATGGTGTC 60.226 57.895 12.43 0.00 0.00 3.67
2782 2984 1.665282 TCGTGCGCGTTTATGGTGT 60.665 52.632 20.50 0.00 39.49 4.16
2783 2985 1.225637 GTCGTGCGCGTTTATGGTG 60.226 57.895 20.50 0.00 39.49 4.17
2784 2986 2.385091 GGTCGTGCGCGTTTATGGT 61.385 57.895 20.50 0.00 39.49 3.55
2785 2987 2.398036 GGTCGTGCGCGTTTATGG 59.602 61.111 20.50 0.00 39.49 2.74
2786 2988 1.632046 AAGGGTCGTGCGCGTTTATG 61.632 55.000 20.50 0.12 39.49 1.90
2787 2989 0.108709 TAAGGGTCGTGCGCGTTTAT 60.109 50.000 20.50 6.29 39.49 1.40
2788 2990 0.319383 TTAAGGGTCGTGCGCGTTTA 60.319 50.000 20.50 11.21 39.49 2.01
2789 2991 1.159098 TTTAAGGGTCGTGCGCGTTT 61.159 50.000 20.50 12.14 39.49 3.60
2790 2992 0.952010 ATTTAAGGGTCGTGCGCGTT 60.952 50.000 20.50 9.02 39.49 4.84
2791 2993 0.952010 AATTTAAGGGTCGTGCGCGT 60.952 50.000 20.50 1.80 39.49 6.01
2792 2994 0.167251 AAATTTAAGGGTCGTGCGCG 59.833 50.000 14.79 14.79 39.92 6.86
2793 2995 2.341318 AAAATTTAAGGGTCGTGCGC 57.659 45.000 0.00 0.00 0.00 6.09
2811 3013 4.815269 CAATTTATCGTGCCCCTCAAAAA 58.185 39.130 0.00 0.00 0.00 1.94
2812 3014 3.367910 GCAATTTATCGTGCCCCTCAAAA 60.368 43.478 0.00 0.00 34.58 2.44
2813 3015 2.165437 GCAATTTATCGTGCCCCTCAAA 59.835 45.455 0.00 0.00 34.58 2.69
2814 3016 1.748493 GCAATTTATCGTGCCCCTCAA 59.252 47.619 0.00 0.00 34.58 3.02
2815 3017 1.388547 GCAATTTATCGTGCCCCTCA 58.611 50.000 0.00 0.00 34.58 3.86
2821 3023 1.604278 GGAGAGGGCAATTTATCGTGC 59.396 52.381 0.00 0.00 40.14 5.34
2822 3024 1.867233 CGGAGAGGGCAATTTATCGTG 59.133 52.381 0.00 0.00 0.00 4.35
2823 3025 1.760613 TCGGAGAGGGCAATTTATCGT 59.239 47.619 0.00 0.00 0.00 3.73
2824 3026 2.135933 GTCGGAGAGGGCAATTTATCG 58.864 52.381 0.00 0.00 36.95 2.92
2825 3027 2.495084 GGTCGGAGAGGGCAATTTATC 58.505 52.381 0.00 0.00 36.95 1.75
2826 3028 1.143073 GGGTCGGAGAGGGCAATTTAT 59.857 52.381 0.00 0.00 36.95 1.40
2827 3029 0.544697 GGGTCGGAGAGGGCAATTTA 59.455 55.000 0.00 0.00 36.95 1.40
2828 3030 1.303282 GGGTCGGAGAGGGCAATTT 59.697 57.895 0.00 0.00 36.95 1.82
2829 3031 2.998949 GGGTCGGAGAGGGCAATT 59.001 61.111 0.00 0.00 36.95 2.32
2830 3032 3.470888 CGGGTCGGAGAGGGCAAT 61.471 66.667 0.00 0.00 36.95 3.56
2835 3037 3.291101 TTTTCGCGGGTCGGAGAGG 62.291 63.158 6.13 0.00 36.95 3.69
2836 3038 2.092882 GTTTTCGCGGGTCGGAGAG 61.093 63.158 6.13 0.00 36.95 3.20
2837 3039 2.048877 GTTTTCGCGGGTCGGAGA 60.049 61.111 6.13 0.00 39.05 3.71
2838 3040 3.116531 GGTTTTCGCGGGTCGGAG 61.117 66.667 6.13 0.00 39.05 4.63
2839 3041 4.685467 GGGTTTTCGCGGGTCGGA 62.685 66.667 6.13 0.00 39.05 4.55
2840 3042 4.992511 TGGGTTTTCGCGGGTCGG 62.993 66.667 6.13 0.00 39.05 4.79
2841 3043 3.419759 CTGGGTTTTCGCGGGTCG 61.420 66.667 6.13 0.00 40.15 4.79
2842 3044 3.733960 GCTGGGTTTTCGCGGGTC 61.734 66.667 6.13 0.00 39.19 4.46
2868 3070 2.918230 GATACAAGGCACCGACGGGG 62.918 65.000 20.00 16.82 43.62 5.73
2869 3071 1.520787 GATACAAGGCACCGACGGG 60.521 63.158 20.00 8.43 40.11 5.28
2870 3072 1.520787 GGATACAAGGCACCGACGG 60.521 63.158 13.61 13.61 0.00 4.79
2871 3073 0.806102 CAGGATACAAGGCACCGACG 60.806 60.000 0.00 0.00 41.41 5.12
2872 3074 1.090052 GCAGGATACAAGGCACCGAC 61.090 60.000 0.00 0.00 41.41 4.79
2873 3075 1.220749 GCAGGATACAAGGCACCGA 59.779 57.895 0.00 0.00 41.41 4.69
2874 3076 0.676466 TTGCAGGATACAAGGCACCG 60.676 55.000 0.00 0.00 39.56 4.94
2875 3077 1.544724 TTTGCAGGATACAAGGCACC 58.455 50.000 0.00 0.00 39.56 5.01
2876 3078 2.672195 GCTTTTGCAGGATACAAGGCAC 60.672 50.000 0.00 0.00 46.58 5.01
2877 3079 1.545582 GCTTTTGCAGGATACAAGGCA 59.454 47.619 0.00 0.00 46.58 4.75
2878 3080 2.284263 GCTTTTGCAGGATACAAGGC 57.716 50.000 0.00 0.00 46.58 4.35
2891 3093 3.267597 CTCCCGCCAACCGCTTTTG 62.268 63.158 0.00 0.00 35.03 2.44
2892 3094 2.983592 CTCCCGCCAACCGCTTTT 60.984 61.111 0.00 0.00 35.03 2.27
2898 3100 2.781431 AAATGTCCCTCCCGCCAACC 62.781 60.000 0.00 0.00 0.00 3.77
2899 3101 1.304134 AAATGTCCCTCCCGCCAAC 60.304 57.895 0.00 0.00 0.00 3.77
2900 3102 1.001393 GAAATGTCCCTCCCGCCAA 60.001 57.895 0.00 0.00 0.00 4.52
2901 3103 2.196997 CTGAAATGTCCCTCCCGCCA 62.197 60.000 0.00 0.00 0.00 5.69
2902 3104 1.452108 CTGAAATGTCCCTCCCGCC 60.452 63.158 0.00 0.00 0.00 6.13
2903 3105 2.115291 GCTGAAATGTCCCTCCCGC 61.115 63.158 0.00 0.00 0.00 6.13
2904 3106 0.107017 ATGCTGAAATGTCCCTCCCG 60.107 55.000 0.00 0.00 0.00 5.14
2905 3107 1.341383 ACATGCTGAAATGTCCCTCCC 60.341 52.381 0.00 0.00 35.92 4.30
2906 3108 1.747355 CACATGCTGAAATGTCCCTCC 59.253 52.381 0.00 0.00 38.75 4.30
2907 3109 1.133790 GCACATGCTGAAATGTCCCTC 59.866 52.381 0.00 0.00 38.75 4.30
2908 3110 1.180029 GCACATGCTGAAATGTCCCT 58.820 50.000 0.00 0.00 38.75 4.20
2909 3111 0.179156 CGCACATGCTGAAATGTCCC 60.179 55.000 1.82 0.00 38.75 4.46
2910 3112 0.523072 ACGCACATGCTGAAATGTCC 59.477 50.000 1.82 0.00 38.75 4.02
2911 3113 2.245096 GAACGCACATGCTGAAATGTC 58.755 47.619 1.82 0.00 38.75 3.06
2912 3114 1.068333 GGAACGCACATGCTGAAATGT 60.068 47.619 1.82 0.00 41.50 2.71
2913 3115 1.621107 GGAACGCACATGCTGAAATG 58.379 50.000 1.82 0.00 39.32 2.32
2914 3116 0.527565 GGGAACGCACATGCTGAAAT 59.472 50.000 1.82 0.00 39.32 2.17
2915 3117 1.523154 GGGGAACGCACATGCTGAAA 61.523 55.000 1.82 0.00 42.57 2.69
2916 3118 1.971167 GGGGAACGCACATGCTGAA 60.971 57.895 1.82 0.00 42.57 3.02
2917 3119 2.359850 GGGGAACGCACATGCTGA 60.360 61.111 1.82 0.00 42.57 4.26
2926 3128 1.153349 GAGAGGATGTGGGGAACGC 60.153 63.158 0.00 0.00 43.69 4.84
2927 3129 1.522569 GGAGAGGATGTGGGGAACG 59.477 63.158 0.00 0.00 0.00 3.95
2928 3130 1.915983 GGGAGAGGATGTGGGGAAC 59.084 63.158 0.00 0.00 0.00 3.62
2929 3131 1.689233 CGGGAGAGGATGTGGGGAA 60.689 63.158 0.00 0.00 0.00 3.97
2930 3132 2.041922 CGGGAGAGGATGTGGGGA 60.042 66.667 0.00 0.00 0.00 4.81
2931 3133 3.866582 GCGGGAGAGGATGTGGGG 61.867 72.222 0.00 0.00 0.00 4.96
2932 3134 3.083349 TGCGGGAGAGGATGTGGG 61.083 66.667 0.00 0.00 0.00 4.61
2933 3135 2.503061 CTGCGGGAGAGGATGTGG 59.497 66.667 0.00 0.00 0.00 4.17
2934 3136 2.202987 GCTGCGGGAGAGGATGTG 60.203 66.667 0.00 0.00 0.00 3.21
2935 3137 3.474570 GGCTGCGGGAGAGGATGT 61.475 66.667 0.00 0.00 0.00 3.06
2936 3138 4.598894 CGGCTGCGGGAGAGGATG 62.599 72.222 0.00 0.00 0.00 3.51
2977 3179 2.101770 GCCAGAATCGCAAGCTGC 59.898 61.111 0.00 0.00 40.69 5.25
2978 3180 1.381928 ATGGCCAGAATCGCAAGCTG 61.382 55.000 13.05 0.00 37.18 4.24
2979 3181 0.682209 AATGGCCAGAATCGCAAGCT 60.682 50.000 13.05 0.00 37.18 3.74
2980 3182 0.174162 AAATGGCCAGAATCGCAAGC 59.826 50.000 13.05 0.00 37.18 4.01
2981 3183 1.202336 GGAAATGGCCAGAATCGCAAG 60.202 52.381 13.05 0.00 0.00 4.01
2982 3184 0.817013 GGAAATGGCCAGAATCGCAA 59.183 50.000 13.05 0.00 0.00 4.85
2983 3185 0.323269 TGGAAATGGCCAGAATCGCA 60.323 50.000 13.05 6.89 33.10 5.10
2984 3186 0.101219 GTGGAAATGGCCAGAATCGC 59.899 55.000 13.05 4.11 38.95 4.58
2985 3187 0.740737 GGTGGAAATGGCCAGAATCG 59.259 55.000 13.05 0.00 38.95 3.34
2986 3188 0.740737 CGGTGGAAATGGCCAGAATC 59.259 55.000 13.05 9.18 38.95 2.52
2987 3189 0.331278 TCGGTGGAAATGGCCAGAAT 59.669 50.000 13.05 0.00 38.95 2.40
2988 3190 0.608035 GTCGGTGGAAATGGCCAGAA 60.608 55.000 13.05 0.00 38.95 3.02
2989 3191 1.002624 GTCGGTGGAAATGGCCAGA 60.003 57.895 13.05 0.00 38.95 3.86
2990 3192 2.398554 CGTCGGTGGAAATGGCCAG 61.399 63.158 13.05 0.00 38.95 4.85
2991 3193 2.359354 CGTCGGTGGAAATGGCCA 60.359 61.111 8.56 8.56 35.02 5.36
2992 3194 3.131478 CCGTCGGTGGAAATGGCC 61.131 66.667 2.08 0.00 0.00 5.36
2993 3195 1.673009 TTCCGTCGGTGGAAATGGC 60.673 57.895 11.88 0.00 44.86 4.40
2994 3196 4.705746 TTCCGTCGGTGGAAATGG 57.294 55.556 11.88 0.00 44.86 3.16
2999 3201 2.569657 CGTGATTCCGTCGGTGGA 59.430 61.111 11.88 0.00 35.83 4.02
3000 3202 3.186047 GCGTGATTCCGTCGGTGG 61.186 66.667 11.88 0.00 0.00 4.61
3001 3203 3.186047 GGCGTGATTCCGTCGGTG 61.186 66.667 11.88 0.00 0.00 4.94
3022 3224 4.778143 CAGGGTGTAGTGCGGCCC 62.778 72.222 0.00 3.04 41.36 5.80
3023 3225 4.778143 CCAGGGTGTAGTGCGGCC 62.778 72.222 0.00 0.00 0.00 6.13
3024 3226 3.952628 GACCAGGGTGTAGTGCGGC 62.953 68.421 0.00 0.00 0.00 6.53
3025 3227 2.264794 GACCAGGGTGTAGTGCGG 59.735 66.667 0.00 0.00 0.00 5.69
3026 3228 2.264794 GGACCAGGGTGTAGTGCG 59.735 66.667 0.00 0.00 0.00 5.34
3027 3229 1.003718 GTGGACCAGGGTGTAGTGC 60.004 63.158 0.00 0.00 0.00 4.40
3028 3230 0.608640 GAGTGGACCAGGGTGTAGTG 59.391 60.000 0.00 0.00 0.00 2.74
3029 3231 0.898789 CGAGTGGACCAGGGTGTAGT 60.899 60.000 0.00 0.00 0.00 2.73
3030 3232 1.890894 CGAGTGGACCAGGGTGTAG 59.109 63.158 0.00 0.00 0.00 2.74
3031 3233 2.280552 GCGAGTGGACCAGGGTGTA 61.281 63.158 0.00 0.00 0.00 2.90
3032 3234 3.626924 GCGAGTGGACCAGGGTGT 61.627 66.667 0.00 0.00 0.00 4.16
3033 3235 4.394712 GGCGAGTGGACCAGGGTG 62.395 72.222 0.00 0.00 0.00 4.61
3065 3267 4.157120 GTCGATCCGGGGTGGTGG 62.157 72.222 0.00 0.00 39.52 4.61
3066 3268 4.157120 GGTCGATCCGGGGTGGTG 62.157 72.222 0.00 0.00 39.52 4.17


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.