Multiple sequence alignment - TraesCS2B01G297100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G297100 chr2B 100.000 3171 0 0 1 3171 415986326 415983156 0.000000e+00 5856.0
1 TraesCS2B01G297100 chr2B 97.099 724 19 1 2450 3171 435041930 435042653 0.000000e+00 1219.0
2 TraesCS2B01G297100 chr2B 96.961 724 22 0 2448 3171 290619202 290619925 0.000000e+00 1216.0
3 TraesCS2B01G297100 chr1B 97.372 723 18 1 2450 3171 259120921 259121643 0.000000e+00 1229.0
4 TraesCS2B01G297100 chr1B 97.095 723 20 1 2450 3171 271675730 271676452 0.000000e+00 1218.0
5 TraesCS2B01G297100 chr1B 91.898 469 36 2 1228 1696 604168191 604167725 0.000000e+00 654.0
6 TraesCS2B01G297100 chr4B 97.234 723 19 1 2450 3171 538460525 538459803 0.000000e+00 1223.0
7 TraesCS2B01G297100 chr4B 88.889 45 4 1 302 346 536089008 536089051 2.000000e-03 54.7
8 TraesCS2B01G297100 chr6B 97.099 724 19 2 2450 3171 699989520 699990243 0.000000e+00 1219.0
9 TraesCS2B01G297100 chr6B 93.952 463 28 0 1229 1691 134421144 134420682 0.000000e+00 701.0
10 TraesCS2B01G297100 chr6B 82.114 123 17 3 2 124 64516855 64516738 2.010000e-17 100.0
11 TraesCS2B01G297100 chr5B 97.099 724 19 2 2448 3170 185431272 185430550 0.000000e+00 1219.0
12 TraesCS2B01G297100 chr7B 97.095 723 19 2 2450 3171 376395733 376396454 0.000000e+00 1218.0
13 TraesCS2B01G297100 chr7B 94.154 479 28 0 1218 1696 692829463 692829941 0.000000e+00 730.0
14 TraesCS2B01G297100 chr3B 97.095 723 20 1 2449 3171 706582819 706583540 0.000000e+00 1218.0
15 TraesCS2B01G297100 chr3B 94.915 649 10 5 1 627 495277047 495276400 0.000000e+00 994.0
16 TraesCS2B01G297100 chr3B 91.720 471 35 4 1226 1695 242144288 242143821 0.000000e+00 651.0
17 TraesCS2B01G297100 chr3B 100.000 32 0 0 620 651 495272862 495272831 3.420000e-05 60.2
18 TraesCS2B01G297100 chr3B 100.000 31 0 0 620 650 495273079 495273049 1.230000e-04 58.4
19 TraesCS2B01G297100 chr2A 89.782 734 66 4 1694 2418 90503548 90502815 0.000000e+00 931.0
20 TraesCS2B01G297100 chr2A 87.901 405 45 3 828 1228 90503943 90503539 1.030000e-129 473.0
21 TraesCS2B01G297100 chr2A 94.444 36 2 0 307 342 243119893 243119858 4.420000e-04 56.5
22 TraesCS2B01G297100 chr1A 93.012 601 42 0 1850 2450 70796927 70796327 0.000000e+00 878.0
23 TraesCS2B01G297100 chr1A 91.966 473 37 1 1229 1701 335048916 335048445 0.000000e+00 662.0
24 TraesCS2B01G297100 chr1A 87.952 415 43 3 816 1228 70897664 70897255 1.710000e-132 483.0
25 TraesCS2B01G297100 chr1A 96.040 101 4 0 2350 2450 544808718 544808618 7.040000e-37 165.0
26 TraesCS2B01G297100 chr1A 91.304 46 4 0 302 347 21006867 21006822 2.640000e-06 63.9
27 TraesCS2B01G297100 chr4D 94.004 467 27 1 1229 1695 433765438 433764973 0.000000e+00 706.0
28 TraesCS2B01G297100 chr4A 92.812 473 30 4 1228 1699 670945877 670946346 0.000000e+00 682.0
29 TraesCS2B01G297100 chr7D 91.489 470 38 2 1228 1695 587172948 587173417 0.000000e+00 645.0
30 TraesCS2B01G297100 chr1D 91.489 470 38 2 1227 1695 234654380 234653912 0.000000e+00 645.0
31 TraesCS2B01G297100 chr3A 95.984 249 9 1 408 656 50399914 50399667 1.370000e-108 403.0
32 TraesCS2B01G297100 chr3A 94.286 35 1 1 617 651 545372997 545372964 6.000000e-03 52.8
33 TraesCS2B01G297100 chr6A 80.328 122 19 4 19 140 35270374 35270258 1.570000e-13 87.9
34 TraesCS2B01G297100 chrUn 97.436 39 1 0 67 105 101761259 101761297 2.040000e-07 67.6
35 TraesCS2B01G297100 chr2D 92.683 41 3 0 302 342 466690388 466690348 3.420000e-05 60.2
36 TraesCS2B01G297100 chr7A 94.595 37 2 0 311 347 577489713 577489749 1.230000e-04 58.4
37 TraesCS2B01G297100 chr5A 89.130 46 5 0 302 347 592473918 592473963 1.230000e-04 58.4
38 TraesCS2B01G297100 chr5A 100.000 28 0 0 311 338 405173254 405173281 6.000000e-03 52.8
39 TraesCS2B01G297100 chr3D 94.595 37 1 1 311 346 604877479 604877515 4.420000e-04 56.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G297100 chr2B 415983156 415986326 3170 True 5856.000000 5856 100.0000 1 3171 1 chr2B.!!$R1 3170
1 TraesCS2B01G297100 chr2B 435041930 435042653 723 False 1219.000000 1219 97.0990 2450 3171 1 chr2B.!!$F2 721
2 TraesCS2B01G297100 chr2B 290619202 290619925 723 False 1216.000000 1216 96.9610 2448 3171 1 chr2B.!!$F1 723
3 TraesCS2B01G297100 chr1B 259120921 259121643 722 False 1229.000000 1229 97.3720 2450 3171 1 chr1B.!!$F1 721
4 TraesCS2B01G297100 chr1B 271675730 271676452 722 False 1218.000000 1218 97.0950 2450 3171 1 chr1B.!!$F2 721
5 TraesCS2B01G297100 chr4B 538459803 538460525 722 True 1223.000000 1223 97.2340 2450 3171 1 chr4B.!!$R1 721
6 TraesCS2B01G297100 chr6B 699989520 699990243 723 False 1219.000000 1219 97.0990 2450 3171 1 chr6B.!!$F1 721
7 TraesCS2B01G297100 chr5B 185430550 185431272 722 True 1219.000000 1219 97.0990 2448 3170 1 chr5B.!!$R1 722
8 TraesCS2B01G297100 chr7B 376395733 376396454 721 False 1218.000000 1218 97.0950 2450 3171 1 chr7B.!!$F1 721
9 TraesCS2B01G297100 chr3B 706582819 706583540 721 False 1218.000000 1218 97.0950 2449 3171 1 chr3B.!!$F1 722
10 TraesCS2B01G297100 chr3B 495272831 495277047 4216 True 370.866667 994 98.3050 1 651 3 chr3B.!!$R2 650
11 TraesCS2B01G297100 chr2A 90502815 90503943 1128 True 702.000000 931 88.8415 828 2418 2 chr2A.!!$R2 1590
12 TraesCS2B01G297100 chr1A 70796327 70796927 600 True 878.000000 878 93.0120 1850 2450 1 chr1A.!!$R2 600

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
770 4338 0.035152 TGGAAGCCTGTGGTATGCAG 60.035 55.0 0.0 0.0 0.0 4.41 F
1576 5148 0.104882 TTATACCCATCCCCGCTCCA 60.105 55.0 0.0 0.0 0.0 3.86 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1689 5261 0.107214 GGCGGGATTCCATGTCAAGA 60.107 55.0 4.8 0.0 0.0 3.02 R
2407 5988 0.108472 TGGCAGCATCAACTCTCTCG 60.108 55.0 0.0 0.0 0.0 4.04 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
49 51 2.794981 CGGACGTCATGTTAAGCTCGAT 60.795 50.000 18.91 0.00 0.00 3.59
69 71 6.273825 TCGATGAGATTAGTTTTCAGGCTAC 58.726 40.000 0.00 0.00 0.00 3.58
223 225 2.372172 AGGAAGGTGGAGAAACGACAAT 59.628 45.455 0.00 0.00 0.00 2.71
305 307 3.067742 AGCTTATTGTGCCAGAATCATGC 59.932 43.478 0.00 0.00 0.00 4.06
310 312 1.089920 GTGCCAGAATCATGCGAACT 58.910 50.000 0.00 0.00 0.00 3.01
327 329 2.863401 ACTTTTTCTCCCGTTGCAAC 57.137 45.000 19.89 19.89 0.00 4.17
390 410 7.226720 CGTGTGTTTGCTAATATCTTTCCCTAT 59.773 37.037 0.00 0.00 0.00 2.57
397 420 8.547967 TGCTAATATCTTTCCCTATTAAAGCG 57.452 34.615 0.00 0.00 34.58 4.68
521 544 5.941555 AGGTTTGGGTTGTTAAAACATCA 57.058 34.783 0.00 0.00 38.95 3.07
532 555 6.633500 TGTTAAAACATCAAAGTGGAGGAG 57.367 37.500 0.00 0.00 33.17 3.69
666 4234 9.727859 TTTTTGCTAGTGAATACATACAGGTAA 57.272 29.630 0.00 0.00 0.00 2.85
667 4235 9.727859 TTTTGCTAGTGAATACATACAGGTAAA 57.272 29.630 0.00 0.00 0.00 2.01
668 4236 9.727859 TTTGCTAGTGAATACATACAGGTAAAA 57.272 29.630 0.00 0.00 0.00 1.52
669 4237 9.727859 TTGCTAGTGAATACATACAGGTAAAAA 57.272 29.630 0.00 0.00 0.00 1.94
690 4258 4.400529 AAACACATGTTTTTCACTCCCC 57.599 40.909 4.12 0.00 45.07 4.81
691 4259 3.312736 ACACATGTTTTTCACTCCCCT 57.687 42.857 0.00 0.00 0.00 4.79
692 4260 3.642141 ACACATGTTTTTCACTCCCCTT 58.358 40.909 0.00 0.00 0.00 3.95
693 4261 3.636764 ACACATGTTTTTCACTCCCCTTC 59.363 43.478 0.00 0.00 0.00 3.46
694 4262 3.891366 CACATGTTTTTCACTCCCCTTCT 59.109 43.478 0.00 0.00 0.00 2.85
695 4263 3.891366 ACATGTTTTTCACTCCCCTTCTG 59.109 43.478 0.00 0.00 0.00 3.02
696 4264 2.306847 TGTTTTTCACTCCCCTTCTGC 58.693 47.619 0.00 0.00 0.00 4.26
697 4265 2.306847 GTTTTTCACTCCCCTTCTGCA 58.693 47.619 0.00 0.00 0.00 4.41
698 4266 2.893489 GTTTTTCACTCCCCTTCTGCAT 59.107 45.455 0.00 0.00 0.00 3.96
699 4267 2.205022 TTTCACTCCCCTTCTGCATG 57.795 50.000 0.00 0.00 0.00 4.06
700 4268 0.329261 TTCACTCCCCTTCTGCATGG 59.671 55.000 0.00 0.00 0.00 3.66
701 4269 1.751927 CACTCCCCTTCTGCATGGC 60.752 63.158 0.00 0.00 0.00 4.40
702 4270 1.927527 ACTCCCCTTCTGCATGGCT 60.928 57.895 0.00 0.00 0.00 4.75
703 4271 1.453379 CTCCCCTTCTGCATGGCTG 60.453 63.158 0.00 0.00 0.00 4.85
704 4272 1.918467 CTCCCCTTCTGCATGGCTGA 61.918 60.000 0.00 0.00 34.87 4.26
705 4273 1.453379 CCCCTTCTGCATGGCTGAG 60.453 63.158 0.00 0.00 37.75 3.35
706 4274 1.302285 CCCTTCTGCATGGCTGAGT 59.698 57.895 0.00 0.00 37.75 3.41
707 4275 0.543277 CCCTTCTGCATGGCTGAGTA 59.457 55.000 0.00 0.00 37.75 2.59
708 4276 1.474677 CCCTTCTGCATGGCTGAGTAG 60.475 57.143 0.00 0.00 37.75 2.57
709 4277 1.483827 CCTTCTGCATGGCTGAGTAGA 59.516 52.381 0.00 0.00 37.75 2.59
710 4278 2.093288 CCTTCTGCATGGCTGAGTAGAA 60.093 50.000 0.00 0.00 37.75 2.10
711 4279 3.603532 CTTCTGCATGGCTGAGTAGAAA 58.396 45.455 0.00 0.00 37.75 2.52
712 4280 2.977914 TCTGCATGGCTGAGTAGAAAC 58.022 47.619 0.00 0.00 32.96 2.78
713 4281 2.302733 TCTGCATGGCTGAGTAGAAACA 59.697 45.455 0.00 0.00 32.96 2.83
714 4282 2.417933 CTGCATGGCTGAGTAGAAACAC 59.582 50.000 0.00 0.00 0.00 3.32
715 4283 2.224499 TGCATGGCTGAGTAGAAACACA 60.224 45.455 0.00 0.00 0.00 3.72
716 4284 2.160417 GCATGGCTGAGTAGAAACACAC 59.840 50.000 0.00 0.00 0.00 3.82
717 4285 2.148916 TGGCTGAGTAGAAACACACG 57.851 50.000 0.00 0.00 0.00 4.49
718 4286 1.411246 TGGCTGAGTAGAAACACACGT 59.589 47.619 0.00 0.00 0.00 4.49
719 4287 2.624364 TGGCTGAGTAGAAACACACGTA 59.376 45.455 0.00 0.00 0.00 3.57
720 4288 3.068448 TGGCTGAGTAGAAACACACGTAA 59.932 43.478 0.00 0.00 0.00 3.18
759 4327 6.731292 AAAAAGATGTTTACTTGGAAGCCT 57.269 33.333 0.00 0.00 0.00 4.58
760 4328 5.712152 AAAGATGTTTACTTGGAAGCCTG 57.288 39.130 0.00 0.00 0.00 4.85
761 4329 4.373156 AGATGTTTACTTGGAAGCCTGT 57.627 40.909 0.00 0.00 0.00 4.00
762 4330 4.074970 AGATGTTTACTTGGAAGCCTGTG 58.925 43.478 0.00 0.00 0.00 3.66
763 4331 2.582052 TGTTTACTTGGAAGCCTGTGG 58.418 47.619 0.00 0.00 0.00 4.17
764 4332 2.092103 TGTTTACTTGGAAGCCTGTGGT 60.092 45.455 0.00 0.00 0.00 4.16
765 4333 3.136809 TGTTTACTTGGAAGCCTGTGGTA 59.863 43.478 0.00 0.00 0.00 3.25
766 4334 4.202524 TGTTTACTTGGAAGCCTGTGGTAT 60.203 41.667 0.00 0.00 0.00 2.73
767 4335 2.496899 ACTTGGAAGCCTGTGGTATG 57.503 50.000 0.00 0.00 0.00 2.39
768 4336 1.098050 CTTGGAAGCCTGTGGTATGC 58.902 55.000 0.00 0.00 0.00 3.14
769 4337 0.403655 TTGGAAGCCTGTGGTATGCA 59.596 50.000 0.00 0.00 0.00 3.96
770 4338 0.035152 TGGAAGCCTGTGGTATGCAG 60.035 55.000 0.00 0.00 0.00 4.41
771 4339 0.253044 GGAAGCCTGTGGTATGCAGA 59.747 55.000 0.00 0.00 36.12 4.26
772 4340 1.133976 GGAAGCCTGTGGTATGCAGAT 60.134 52.381 0.00 0.00 36.12 2.90
773 4341 1.945394 GAAGCCTGTGGTATGCAGATG 59.055 52.381 0.00 0.00 36.12 2.90
774 4342 0.914644 AGCCTGTGGTATGCAGATGT 59.085 50.000 0.00 0.00 36.12 3.06
775 4343 2.118679 AGCCTGTGGTATGCAGATGTA 58.881 47.619 0.00 0.00 36.12 2.29
776 4344 2.505407 AGCCTGTGGTATGCAGATGTAA 59.495 45.455 0.00 0.00 36.12 2.41
777 4345 3.054434 AGCCTGTGGTATGCAGATGTAAA 60.054 43.478 0.00 0.00 36.12 2.01
778 4346 3.313526 GCCTGTGGTATGCAGATGTAAAG 59.686 47.826 0.00 0.00 36.12 1.85
779 4347 4.517285 CCTGTGGTATGCAGATGTAAAGT 58.483 43.478 0.00 0.00 36.12 2.66
780 4348 4.333649 CCTGTGGTATGCAGATGTAAAGTG 59.666 45.833 0.00 0.00 36.12 3.16
781 4349 4.905429 TGTGGTATGCAGATGTAAAGTGT 58.095 39.130 0.00 0.00 0.00 3.55
782 4350 5.312895 TGTGGTATGCAGATGTAAAGTGTT 58.687 37.500 0.00 0.00 0.00 3.32
783 4351 5.767665 TGTGGTATGCAGATGTAAAGTGTTT 59.232 36.000 0.00 0.00 0.00 2.83
784 4352 6.264292 TGTGGTATGCAGATGTAAAGTGTTTT 59.736 34.615 0.00 0.00 0.00 2.43
785 4353 7.145323 GTGGTATGCAGATGTAAAGTGTTTTT 58.855 34.615 0.00 0.00 0.00 1.94
807 4375 6.360370 TTTTAGGTGTCTAGCTCAATGACT 57.640 37.500 0.00 0.00 35.90 3.41
808 4376 6.360370 TTTAGGTGTCTAGCTCAATGACTT 57.640 37.500 0.00 0.00 35.90 3.01
809 4377 4.899352 AGGTGTCTAGCTCAATGACTTT 57.101 40.909 0.00 0.00 0.00 2.66
810 4378 5.234466 AGGTGTCTAGCTCAATGACTTTT 57.766 39.130 0.00 0.00 0.00 2.27
811 4379 4.999950 AGGTGTCTAGCTCAATGACTTTTG 59.000 41.667 0.00 0.00 0.00 2.44
812 4380 4.757149 GGTGTCTAGCTCAATGACTTTTGT 59.243 41.667 0.00 0.00 0.00 2.83
813 4381 8.005007 TAGGTGTCTAGCTCAATGACTTTTGTC 61.005 40.741 0.00 0.00 41.36 3.18
822 4390 2.467962 GACTTTTGTCGCCTAGGGC 58.532 57.895 11.72 1.76 46.75 5.19
850 4418 2.359967 GGGTTCTCCTGTCCTCCGG 61.360 68.421 0.00 0.00 0.00 5.14
875 4446 1.741770 GCCGCGGAGAGTTTCACAT 60.742 57.895 33.48 0.00 0.00 3.21
876 4447 1.298859 GCCGCGGAGAGTTTCACATT 61.299 55.000 33.48 0.00 0.00 2.71
879 4450 0.874390 GCGGAGAGTTTCACATTGCA 59.126 50.000 0.00 0.00 0.00 4.08
892 4463 0.520404 CATTGCAGTTGAAGAGCGCT 59.480 50.000 11.27 11.27 0.00 5.92
896 4467 1.962822 CAGTTGAAGAGCGCTGCCA 60.963 57.895 18.48 6.78 0.00 4.92
916 4487 2.436646 CGCGCCTTGTTCCTGGAT 60.437 61.111 0.00 0.00 0.00 3.41
917 4488 2.040544 CGCGCCTTGTTCCTGGATT 61.041 57.895 0.00 0.00 0.00 3.01
923 4494 1.467920 CTTGTTCCTGGATTGGCCTC 58.532 55.000 3.32 0.00 37.63 4.70
944 4515 2.335369 CGGGGCGGATCTAGTTCG 59.665 66.667 0.00 0.00 0.00 3.95
945 4516 2.487532 CGGGGCGGATCTAGTTCGT 61.488 63.158 0.00 0.00 0.00 3.85
952 4523 2.853003 GCGGATCTAGTTCGTTTCTGTC 59.147 50.000 0.00 0.00 0.00 3.51
956 4527 5.449314 CGGATCTAGTTCGTTTCTGTCTCAT 60.449 44.000 0.00 0.00 0.00 2.90
964 4535 2.669670 CGTTTCTGTCTCATCGCAGACT 60.670 50.000 9.51 0.00 43.00 3.24
971 4542 2.166664 GTCTCATCGCAGACTAACCCTT 59.833 50.000 2.69 0.00 42.51 3.95
973 4544 1.009829 CATCGCAGACTAACCCTTGC 58.990 55.000 0.00 0.00 42.51 4.01
985 4556 2.436646 CCTTGCGGGGCTGTAGTG 60.437 66.667 0.00 0.00 0.00 2.74
986 4557 2.662596 CTTGCGGGGCTGTAGTGA 59.337 61.111 0.00 0.00 0.00 3.41
988 4559 1.003839 TTGCGGGGCTGTAGTGAAG 60.004 57.895 0.00 0.00 0.00 3.02
1004 4576 4.265073 AGTGAAGGATTGTAAGTCATGGC 58.735 43.478 0.00 0.00 0.00 4.40
1029 4601 0.538584 AGGACGATGCAAGCAGATCA 59.461 50.000 0.00 0.00 0.00 2.92
1050 4622 1.448717 GGGCAAGAGCTCGGAAGAC 60.449 63.158 8.37 1.40 41.70 3.01
1056 4628 0.626916 AGAGCTCGGAAGACCCTAGT 59.373 55.000 8.37 0.00 35.39 2.57
1059 4631 0.669619 GCTCGGAAGACCCTAGTAGC 59.330 60.000 0.00 0.00 35.39 3.58
1104 4676 3.100671 AGAGGACGAGCTTGATAACCTT 58.899 45.455 8.31 0.64 0.00 3.50
1122 4694 5.382664 ACCTTGTTTGGGAAGAAGAAGTA 57.617 39.130 0.00 0.00 38.14 2.24
1159 4731 3.673484 CCAAGTGGTTGGCGCTGG 61.673 66.667 7.64 0.00 46.99 4.85
1174 4746 1.616159 GCTGGCTAGGGTTTTGACAA 58.384 50.000 0.00 0.00 0.00 3.18
1185 4757 7.382488 GCTAGGGTTTTGACAAAGAAATCTTTC 59.618 37.037 5.45 0.00 43.72 2.62
1186 4758 7.181569 AGGGTTTTGACAAAGAAATCTTTCA 57.818 32.000 5.45 0.04 43.72 2.69
1188 4760 7.041721 GGGTTTTGACAAAGAAATCTTTCAGT 58.958 34.615 5.45 2.52 43.72 3.41
1228 4800 2.684881 GACATGAAGGCGACATGGAATT 59.315 45.455 22.88 8.77 46.19 2.17
1229 4801 2.684881 ACATGAAGGCGACATGGAATTC 59.315 45.455 22.88 0.00 46.19 2.17
1230 4802 2.488204 TGAAGGCGACATGGAATTCA 57.512 45.000 7.93 0.00 0.00 2.57
1231 4803 2.789213 TGAAGGCGACATGGAATTCAA 58.211 42.857 7.93 0.00 0.00 2.69
1232 4804 2.749076 TGAAGGCGACATGGAATTCAAG 59.251 45.455 7.93 0.00 0.00 3.02
1233 4805 1.755179 AGGCGACATGGAATTCAAGG 58.245 50.000 7.93 0.00 0.00 3.61
1234 4806 1.004745 AGGCGACATGGAATTCAAGGT 59.995 47.619 7.93 3.31 0.00 3.50
1235 4807 1.401905 GGCGACATGGAATTCAAGGTC 59.598 52.381 16.12 16.12 33.27 3.85
1237 4809 1.062587 CGACATGGAATTCAAGGTCGC 59.937 52.381 30.29 6.67 44.20 5.19
1238 4810 2.083774 GACATGGAATTCAAGGTCGCA 58.916 47.619 11.62 0.00 0.00 5.10
1239 4811 2.487762 GACATGGAATTCAAGGTCGCAA 59.512 45.455 11.62 0.00 0.00 4.85
1240 4812 2.228822 ACATGGAATTCAAGGTCGCAAC 59.771 45.455 7.93 0.00 0.00 4.17
1241 4813 0.871722 TGGAATTCAAGGTCGCAACG 59.128 50.000 7.93 0.00 0.00 4.10
1242 4814 0.168128 GGAATTCAAGGTCGCAACGG 59.832 55.000 7.93 0.00 0.00 4.44
1243 4815 0.168128 GAATTCAAGGTCGCAACGGG 59.832 55.000 0.00 0.00 0.00 5.28
1244 4816 1.241315 AATTCAAGGTCGCAACGGGG 61.241 55.000 0.00 0.00 0.00 5.73
1245 4817 2.119484 ATTCAAGGTCGCAACGGGGA 62.119 55.000 0.00 0.00 0.00 4.81
1246 4818 2.281208 CAAGGTCGCAACGGGGAA 60.281 61.111 0.00 0.00 37.76 3.97
1247 4819 2.032071 AAGGTCGCAACGGGGAAG 59.968 61.111 0.00 0.00 37.76 3.46
1248 4820 3.546714 AAGGTCGCAACGGGGAAGG 62.547 63.158 0.00 0.00 37.76 3.46
1254 4826 3.253838 CAACGGGGAAGGGGGTGA 61.254 66.667 0.00 0.00 0.00 4.02
1255 4827 3.254617 AACGGGGAAGGGGGTGAC 61.255 66.667 0.00 0.00 0.00 3.67
1266 4838 2.687566 GGGTGACCGGGGATGACT 60.688 66.667 6.32 0.00 43.64 3.41
1267 4839 2.732619 GGGTGACCGGGGATGACTC 61.733 68.421 6.32 0.00 43.64 3.36
1268 4840 2.732619 GGTGACCGGGGATGACTCC 61.733 68.421 6.32 0.00 41.26 3.85
1269 4841 1.987855 GTGACCGGGGATGACTCCA 60.988 63.158 6.32 0.00 44.08 3.86
1270 4842 1.987855 TGACCGGGGATGACTCCAC 60.988 63.158 6.32 0.00 44.08 4.02
1271 4843 2.687566 ACCGGGGATGACTCCACC 60.688 66.667 6.32 0.00 42.59 4.61
1272 4844 2.687200 CCGGGGATGACTCCACCA 60.687 66.667 0.00 0.00 42.59 4.17
1273 4845 2.072487 CCGGGGATGACTCCACCAT 61.072 63.158 0.00 0.00 42.59 3.55
1274 4846 1.447643 CGGGGATGACTCCACCATC 59.552 63.158 0.00 0.00 42.59 3.51
1278 4850 1.447643 GATGACTCCACCATCCCCG 59.552 63.158 0.00 0.00 35.56 5.73
1279 4851 2.666596 GATGACTCCACCATCCCCGC 62.667 65.000 0.00 0.00 35.56 6.13
1280 4852 4.176752 GACTCCACCATCCCCGCC 62.177 72.222 0.00 0.00 0.00 6.13
1296 4868 4.643387 CCCCGATCCCCGCCAATC 62.643 72.222 0.00 0.00 36.84 2.67
1297 4869 4.643387 CCCGATCCCCGCCAATCC 62.643 72.222 0.00 0.00 36.84 3.01
1298 4870 4.643387 CCGATCCCCGCCAATCCC 62.643 72.222 0.00 0.00 36.84 3.85
1299 4871 4.643387 CGATCCCCGCCAATCCCC 62.643 72.222 0.00 0.00 0.00 4.81
1300 4872 3.498071 GATCCCCGCCAATCCCCA 61.498 66.667 0.00 0.00 0.00 4.96
1301 4873 2.782702 ATCCCCGCCAATCCCCAT 60.783 61.111 0.00 0.00 0.00 4.00
1302 4874 1.465188 ATCCCCGCCAATCCCCATA 60.465 57.895 0.00 0.00 0.00 2.74
1303 4875 1.789576 ATCCCCGCCAATCCCCATAC 61.790 60.000 0.00 0.00 0.00 2.39
1304 4876 2.115266 CCCGCCAATCCCCATACC 59.885 66.667 0.00 0.00 0.00 2.73
1305 4877 2.115266 CCGCCAATCCCCATACCC 59.885 66.667 0.00 0.00 0.00 3.69
1306 4878 2.762554 CCGCCAATCCCCATACCCA 61.763 63.158 0.00 0.00 0.00 4.51
1307 4879 1.528309 CGCCAATCCCCATACCCAC 60.528 63.158 0.00 0.00 0.00 4.61
1308 4880 1.528309 GCCAATCCCCATACCCACG 60.528 63.158 0.00 0.00 0.00 4.94
1309 4881 1.990160 GCCAATCCCCATACCCACGA 61.990 60.000 0.00 0.00 0.00 4.35
1310 4882 0.771127 CCAATCCCCATACCCACGAT 59.229 55.000 0.00 0.00 0.00 3.73
1311 4883 1.271379 CCAATCCCCATACCCACGATC 60.271 57.143 0.00 0.00 0.00 3.69
1312 4884 1.064825 AATCCCCATACCCACGATCC 58.935 55.000 0.00 0.00 0.00 3.36
1313 4885 0.840722 ATCCCCATACCCACGATCCC 60.841 60.000 0.00 0.00 0.00 3.85
1314 4886 2.526046 CCCCATACCCACGATCCCC 61.526 68.421 0.00 0.00 0.00 4.81
1315 4887 2.741092 CCATACCCACGATCCCCG 59.259 66.667 0.00 0.00 45.44 5.73
1324 4896 4.110493 CGATCCCCGTGAAGCTTC 57.890 61.111 19.89 19.89 0.00 3.86
1325 4897 1.878522 CGATCCCCGTGAAGCTTCG 60.879 63.158 21.11 11.07 0.00 3.79
1326 4898 2.125106 ATCCCCGTGAAGCTTCGC 60.125 61.111 26.65 26.65 0.00 4.70
1332 4904 3.119096 GTGAAGCTTCGCGGGGAC 61.119 66.667 23.20 10.15 0.00 4.46
1333 4905 3.621805 TGAAGCTTCGCGGGGACA 61.622 61.111 21.11 0.00 0.00 4.02
1334 4906 2.358247 GAAGCTTCGCGGGGACAA 60.358 61.111 11.40 0.00 0.00 3.18
1335 4907 1.964373 GAAGCTTCGCGGGGACAAA 60.964 57.895 11.40 0.00 0.00 2.83
1336 4908 1.512156 GAAGCTTCGCGGGGACAAAA 61.512 55.000 11.40 0.00 0.00 2.44
1337 4909 1.792118 AAGCTTCGCGGGGACAAAAC 61.792 55.000 6.13 0.00 0.00 2.43
1338 4910 2.554272 CTTCGCGGGGACAAAACG 59.446 61.111 6.13 0.00 0.00 3.60
1360 4932 3.297134 CCCCCATCCCCATTAATATCG 57.703 52.381 0.00 0.00 0.00 2.92
1361 4933 2.091885 CCCCCATCCCCATTAATATCGG 60.092 54.545 0.00 0.00 0.00 4.18
1362 4934 2.091885 CCCCATCCCCATTAATATCGGG 60.092 54.545 7.75 7.75 39.92 5.14
1363 4935 2.580783 CCCATCCCCATTAATATCGGGT 59.419 50.000 12.09 0.00 38.40 5.28
1364 4936 3.783642 CCCATCCCCATTAATATCGGGTA 59.216 47.826 12.09 0.00 38.40 3.69
1365 4937 4.384868 CCCATCCCCATTAATATCGGGTAC 60.385 50.000 12.09 0.00 38.40 3.34
1379 4951 3.518068 GTACCCGGTACCCGTCGG 61.518 72.222 15.95 3.60 46.80 4.79
1389 4961 2.741092 CCCGTCGGGTATCCATGG 59.259 66.667 23.02 4.97 38.25 3.66
1390 4962 2.741092 CCGTCGGGTATCCATGGG 59.259 66.667 13.02 0.00 0.00 4.00
1391 4963 2.741092 CGTCGGGTATCCATGGGG 59.259 66.667 13.02 0.00 0.00 4.96
1402 4974 1.864669 TCCATGGGGATTTCAAAGCC 58.135 50.000 13.02 0.00 38.64 4.35
1410 4982 3.366052 GGATTTCAAAGCCCACTAGGA 57.634 47.619 0.00 0.00 38.24 2.94
1411 4983 3.903467 GGATTTCAAAGCCCACTAGGAT 58.097 45.455 0.00 0.00 38.24 3.24
1412 4984 5.048846 GGATTTCAAAGCCCACTAGGATA 57.951 43.478 0.00 0.00 38.24 2.59
1413 4985 5.066593 GGATTTCAAAGCCCACTAGGATAG 58.933 45.833 0.00 0.00 46.50 2.08
1414 4986 4.503714 TTTCAAAGCCCACTAGGATAGG 57.496 45.455 0.00 0.00 44.97 2.57
1415 4987 3.130734 TCAAAGCCCACTAGGATAGGT 57.869 47.619 0.00 0.00 44.97 3.08
1416 4988 2.771943 TCAAAGCCCACTAGGATAGGTG 59.228 50.000 0.00 0.00 44.97 4.00
1417 4989 2.771943 CAAAGCCCACTAGGATAGGTGA 59.228 50.000 0.00 0.00 44.97 4.02
1418 4990 2.390225 AGCCCACTAGGATAGGTGAG 57.610 55.000 0.00 0.00 44.97 3.51
1419 4991 1.860240 AGCCCACTAGGATAGGTGAGA 59.140 52.381 0.00 0.00 44.97 3.27
1420 4992 2.452823 AGCCCACTAGGATAGGTGAGAT 59.547 50.000 0.00 0.00 44.97 2.75
1421 4993 3.116551 AGCCCACTAGGATAGGTGAGATT 60.117 47.826 0.00 0.00 44.97 2.40
1422 4994 3.007398 GCCCACTAGGATAGGTGAGATTG 59.993 52.174 0.00 0.00 44.97 2.67
1423 4995 4.483950 CCCACTAGGATAGGTGAGATTGA 58.516 47.826 0.00 0.00 44.97 2.57
1424 4996 4.901849 CCCACTAGGATAGGTGAGATTGAA 59.098 45.833 0.00 0.00 44.97 2.69
1425 4997 5.011533 CCCACTAGGATAGGTGAGATTGAAG 59.988 48.000 0.00 0.00 44.97 3.02
1426 4998 5.835819 CCACTAGGATAGGTGAGATTGAAGA 59.164 44.000 0.00 0.00 44.97 2.87
1427 4999 6.325028 CCACTAGGATAGGTGAGATTGAAGAA 59.675 42.308 0.00 0.00 44.97 2.52
1428 5000 7.432869 CACTAGGATAGGTGAGATTGAAGAAG 58.567 42.308 0.00 0.00 44.97 2.85
1429 5001 7.286546 CACTAGGATAGGTGAGATTGAAGAAGA 59.713 40.741 0.00 0.00 44.97 2.87
1430 5002 6.478512 AGGATAGGTGAGATTGAAGAAGAC 57.521 41.667 0.00 0.00 0.00 3.01
1431 5003 5.960811 AGGATAGGTGAGATTGAAGAAGACA 59.039 40.000 0.00 0.00 0.00 3.41
1432 5004 6.614906 AGGATAGGTGAGATTGAAGAAGACAT 59.385 38.462 0.00 0.00 0.00 3.06
1433 5005 6.705381 GGATAGGTGAGATTGAAGAAGACATG 59.295 42.308 0.00 0.00 0.00 3.21
1434 5006 4.841422 AGGTGAGATTGAAGAAGACATGG 58.159 43.478 0.00 0.00 0.00 3.66
1435 5007 4.288105 AGGTGAGATTGAAGAAGACATGGT 59.712 41.667 0.00 0.00 0.00 3.55
1436 5008 4.633565 GGTGAGATTGAAGAAGACATGGTC 59.366 45.833 0.00 0.00 0.00 4.02
1437 5009 4.328440 GTGAGATTGAAGAAGACATGGTCG 59.672 45.833 0.00 0.00 37.67 4.79
1438 5010 4.021104 TGAGATTGAAGAAGACATGGTCGT 60.021 41.667 0.00 0.00 37.67 4.34
1439 5011 4.899502 AGATTGAAGAAGACATGGTCGTT 58.100 39.130 0.00 0.00 37.67 3.85
1440 5012 4.692625 AGATTGAAGAAGACATGGTCGTTG 59.307 41.667 0.00 0.00 37.67 4.10
1441 5013 3.744238 TGAAGAAGACATGGTCGTTGA 57.256 42.857 0.00 0.00 37.67 3.18
1442 5014 3.653344 TGAAGAAGACATGGTCGTTGAG 58.347 45.455 0.00 0.00 37.67 3.02
1443 5015 3.320826 TGAAGAAGACATGGTCGTTGAGA 59.679 43.478 0.00 0.00 37.67 3.27
1444 5016 3.584406 AGAAGACATGGTCGTTGAGAG 57.416 47.619 0.00 0.00 37.67 3.20
1445 5017 3.157881 AGAAGACATGGTCGTTGAGAGA 58.842 45.455 0.00 0.00 37.67 3.10
1446 5018 3.192422 AGAAGACATGGTCGTTGAGAGAG 59.808 47.826 0.00 0.00 37.67 3.20
1447 5019 1.821753 AGACATGGTCGTTGAGAGAGG 59.178 52.381 0.00 0.00 37.67 3.69
1448 5020 1.546476 GACATGGTCGTTGAGAGAGGT 59.454 52.381 0.00 0.00 0.00 3.85
1449 5021 1.273606 ACATGGTCGTTGAGAGAGGTG 59.726 52.381 0.00 0.00 0.00 4.00
1450 5022 0.898320 ATGGTCGTTGAGAGAGGTGG 59.102 55.000 0.00 0.00 0.00 4.61
1451 5023 0.178973 TGGTCGTTGAGAGAGGTGGA 60.179 55.000 0.00 0.00 0.00 4.02
1452 5024 0.528470 GGTCGTTGAGAGAGGTGGAG 59.472 60.000 0.00 0.00 0.00 3.86
1453 5025 1.535833 GTCGTTGAGAGAGGTGGAGA 58.464 55.000 0.00 0.00 0.00 3.71
1454 5026 1.887198 GTCGTTGAGAGAGGTGGAGAA 59.113 52.381 0.00 0.00 0.00 2.87
1455 5027 2.296471 GTCGTTGAGAGAGGTGGAGAAA 59.704 50.000 0.00 0.00 0.00 2.52
1456 5028 2.963101 TCGTTGAGAGAGGTGGAGAAAA 59.037 45.455 0.00 0.00 0.00 2.29
1457 5029 3.386726 TCGTTGAGAGAGGTGGAGAAAAA 59.613 43.478 0.00 0.00 0.00 1.94
1458 5030 4.040461 TCGTTGAGAGAGGTGGAGAAAAAT 59.960 41.667 0.00 0.00 0.00 1.82
1459 5031 4.153117 CGTTGAGAGAGGTGGAGAAAAATG 59.847 45.833 0.00 0.00 0.00 2.32
1460 5032 5.308825 GTTGAGAGAGGTGGAGAAAAATGA 58.691 41.667 0.00 0.00 0.00 2.57
1461 5033 5.768980 TGAGAGAGGTGGAGAAAAATGAT 57.231 39.130 0.00 0.00 0.00 2.45
1462 5034 6.131972 TGAGAGAGGTGGAGAAAAATGATT 57.868 37.500 0.00 0.00 0.00 2.57
1463 5035 5.942236 TGAGAGAGGTGGAGAAAAATGATTG 59.058 40.000 0.00 0.00 0.00 2.67
1464 5036 5.885465 AGAGAGGTGGAGAAAAATGATTGT 58.115 37.500 0.00 0.00 0.00 2.71
1465 5037 5.709164 AGAGAGGTGGAGAAAAATGATTGTG 59.291 40.000 0.00 0.00 0.00 3.33
1466 5038 5.388654 AGAGGTGGAGAAAAATGATTGTGT 58.611 37.500 0.00 0.00 0.00 3.72
1467 5039 5.242393 AGAGGTGGAGAAAAATGATTGTGTG 59.758 40.000 0.00 0.00 0.00 3.82
1468 5040 5.139727 AGGTGGAGAAAAATGATTGTGTGA 58.860 37.500 0.00 0.00 0.00 3.58
1469 5041 5.598005 AGGTGGAGAAAAATGATTGTGTGAA 59.402 36.000 0.00 0.00 0.00 3.18
1470 5042 6.098124 AGGTGGAGAAAAATGATTGTGTGAAA 59.902 34.615 0.00 0.00 0.00 2.69
1471 5043 6.930722 GGTGGAGAAAAATGATTGTGTGAAAT 59.069 34.615 0.00 0.00 0.00 2.17
1472 5044 8.087750 GGTGGAGAAAAATGATTGTGTGAAATA 58.912 33.333 0.00 0.00 0.00 1.40
1473 5045 9.643693 GTGGAGAAAAATGATTGTGTGAAATAT 57.356 29.630 0.00 0.00 0.00 1.28
1474 5046 9.859427 TGGAGAAAAATGATTGTGTGAAATATC 57.141 29.630 0.00 0.00 0.00 1.63
1526 5098 7.067532 TGTAGTACAAATGGCATAGTTTTCG 57.932 36.000 0.00 0.00 0.00 3.46
1527 5099 5.560966 AGTACAAATGGCATAGTTTTCGG 57.439 39.130 0.00 0.00 0.00 4.30
1528 5100 3.866883 ACAAATGGCATAGTTTTCGGG 57.133 42.857 0.00 0.00 0.00 5.14
1529 5101 3.161866 ACAAATGGCATAGTTTTCGGGT 58.838 40.909 0.00 0.00 0.00 5.28
1530 5102 4.337145 ACAAATGGCATAGTTTTCGGGTA 58.663 39.130 0.00 0.00 0.00 3.69
1531 5103 4.953579 ACAAATGGCATAGTTTTCGGGTAT 59.046 37.500 0.00 0.00 0.00 2.73
1532 5104 5.067283 ACAAATGGCATAGTTTTCGGGTATC 59.933 40.000 0.00 0.00 0.00 2.24
1533 5105 3.202829 TGGCATAGTTTTCGGGTATCC 57.797 47.619 0.00 0.00 0.00 2.59
1534 5106 2.506231 TGGCATAGTTTTCGGGTATCCA 59.494 45.455 0.00 0.00 0.00 3.41
1535 5107 3.137544 TGGCATAGTTTTCGGGTATCCAT 59.862 43.478 0.00 0.00 0.00 3.41
1536 5108 3.502211 GGCATAGTTTTCGGGTATCCATG 59.498 47.826 0.00 0.00 0.00 3.66
1537 5109 3.502211 GCATAGTTTTCGGGTATCCATGG 59.498 47.826 4.97 4.97 0.00 3.66
1538 5110 4.745478 GCATAGTTTTCGGGTATCCATGGA 60.745 45.833 18.88 18.88 0.00 3.41
1539 5111 3.560636 AGTTTTCGGGTATCCATGGAG 57.439 47.619 21.33 6.07 0.00 3.86
1540 5112 2.844348 AGTTTTCGGGTATCCATGGAGT 59.156 45.455 21.33 10.87 0.00 3.85
1541 5113 3.118371 AGTTTTCGGGTATCCATGGAGTC 60.118 47.826 21.33 14.66 0.00 3.36
1542 5114 1.420430 TTCGGGTATCCATGGAGTCC 58.580 55.000 21.33 22.06 0.00 3.85
1543 5115 0.471211 TCGGGTATCCATGGAGTCCC 60.471 60.000 31.58 31.58 37.51 4.46
1544 5116 0.471971 CGGGTATCCATGGAGTCCCT 60.472 60.000 34.64 18.72 38.18 4.20
1545 5117 1.203137 CGGGTATCCATGGAGTCCCTA 60.203 57.143 34.64 17.85 38.18 3.53
1546 5118 2.258109 GGGTATCCATGGAGTCCCTAC 58.742 57.143 32.90 23.85 37.71 3.18
1547 5119 1.893801 GGTATCCATGGAGTCCCTACG 59.106 57.143 21.33 0.00 0.00 3.51
1548 5120 1.893801 GTATCCATGGAGTCCCTACGG 59.106 57.143 21.33 1.73 0.00 4.02
1549 5121 0.471971 ATCCATGGAGTCCCTACGGG 60.472 60.000 21.33 1.05 46.11 5.28
1564 5136 4.401022 CCTACGGGGGAAATTTTATACCC 58.599 47.826 4.41 4.41 41.41 3.69
1565 5137 4.141205 CCTACGGGGGAAATTTTATACCCA 60.141 45.833 13.23 0.00 43.30 4.51
1566 5138 4.546224 ACGGGGGAAATTTTATACCCAT 57.454 40.909 13.23 0.31 43.30 4.00
1567 5139 4.476297 ACGGGGGAAATTTTATACCCATC 58.524 43.478 13.23 5.50 43.30 3.51
1568 5140 3.830178 CGGGGGAAATTTTATACCCATCC 59.170 47.826 13.23 6.49 43.30 3.51
1569 5141 4.164981 GGGGGAAATTTTATACCCATCCC 58.835 47.826 13.23 6.32 43.30 3.85
1571 5143 3.830178 GGGAAATTTTATACCCATCCCCG 59.170 47.826 7.62 0.00 41.72 5.73
1572 5144 3.257375 GGAAATTTTATACCCATCCCCGC 59.743 47.826 0.00 0.00 0.00 6.13
1573 5145 3.895704 AATTTTATACCCATCCCCGCT 57.104 42.857 0.00 0.00 0.00 5.52
1574 5146 2.943036 TTTTATACCCATCCCCGCTC 57.057 50.000 0.00 0.00 0.00 5.03
1575 5147 1.061546 TTTATACCCATCCCCGCTCC 58.938 55.000 0.00 0.00 0.00 4.70
1576 5148 0.104882 TTATACCCATCCCCGCTCCA 60.105 55.000 0.00 0.00 0.00 3.86
1577 5149 0.834687 TATACCCATCCCCGCTCCAC 60.835 60.000 0.00 0.00 0.00 4.02
1588 5160 4.787999 GCTCCACGAGACTAACGG 57.212 61.111 0.00 0.00 34.93 4.44
1589 5161 1.139095 GCTCCACGAGACTAACGGG 59.861 63.158 0.00 0.00 34.93 5.28
1590 5162 1.593296 GCTCCACGAGACTAACGGGT 61.593 60.000 0.00 0.00 34.93 5.28
1591 5163 1.742761 CTCCACGAGACTAACGGGTA 58.257 55.000 0.00 0.00 34.93 3.69
1592 5164 1.399791 CTCCACGAGACTAACGGGTAC 59.600 57.143 0.00 0.00 34.93 3.34
1608 5180 2.760581 GGTACCCACCAGAGAATACCT 58.239 52.381 0.00 0.00 45.04 3.08
1609 5181 3.919834 GGTACCCACCAGAGAATACCTA 58.080 50.000 0.00 0.00 45.04 3.08
1610 5182 4.490706 GGTACCCACCAGAGAATACCTAT 58.509 47.826 0.00 0.00 45.04 2.57
1611 5183 4.283722 GGTACCCACCAGAGAATACCTATG 59.716 50.000 0.00 0.00 45.04 2.23
1620 5192 6.380079 CAGAGAATACCTATGGGGCTAATT 57.620 41.667 0.00 0.00 39.10 1.40
1621 5193 6.784031 CAGAGAATACCTATGGGGCTAATTT 58.216 40.000 0.00 0.00 39.10 1.82
1622 5194 6.656693 CAGAGAATACCTATGGGGCTAATTTG 59.343 42.308 0.00 0.00 39.10 2.32
1623 5195 6.332901 AGAGAATACCTATGGGGCTAATTTGT 59.667 38.462 0.00 0.00 39.10 2.83
1624 5196 6.543735 AGAATACCTATGGGGCTAATTTGTC 58.456 40.000 0.00 0.00 39.10 3.18
1625 5197 3.595190 ACCTATGGGGCTAATTTGTCC 57.405 47.619 1.48 1.48 39.10 4.02
1630 5202 3.946242 GGGCTAATTTGTCCCCCAT 57.054 52.632 0.00 0.00 35.75 4.00
1631 5203 1.704641 GGGCTAATTTGTCCCCCATC 58.295 55.000 0.00 0.00 35.75 3.51
1632 5204 1.704641 GGCTAATTTGTCCCCCATCC 58.295 55.000 0.00 0.00 0.00 3.51
1633 5205 1.704641 GCTAATTTGTCCCCCATCCC 58.295 55.000 0.00 0.00 0.00 3.85
1634 5206 1.757764 GCTAATTTGTCCCCCATCCCC 60.758 57.143 0.00 0.00 0.00 4.81
1635 5207 0.553819 TAATTTGTCCCCCATCCCCG 59.446 55.000 0.00 0.00 0.00 5.73
1636 5208 2.871795 AATTTGTCCCCCATCCCCGC 62.872 60.000 0.00 0.00 0.00 6.13
1642 5214 4.275508 CCCCATCCCCGCTCCATG 62.276 72.222 0.00 0.00 0.00 3.66
1643 5215 3.170672 CCCATCCCCGCTCCATGA 61.171 66.667 0.00 0.00 0.00 3.07
1644 5216 2.111878 CCATCCCCGCTCCATGAC 59.888 66.667 0.00 0.00 0.00 3.06
1645 5217 2.280389 CATCCCCGCTCCATGACG 60.280 66.667 0.00 0.00 0.00 4.35
1650 5222 2.897207 CCGCTCCATGACGGGTAA 59.103 61.111 12.35 0.00 45.74 2.85
1651 5223 1.219664 CCGCTCCATGACGGGTAAA 59.780 57.895 12.35 0.00 45.74 2.01
1652 5224 0.179056 CCGCTCCATGACGGGTAAAT 60.179 55.000 12.35 0.00 45.74 1.40
1653 5225 1.217882 CGCTCCATGACGGGTAAATC 58.782 55.000 0.00 0.00 34.36 2.17
1654 5226 1.594331 GCTCCATGACGGGTAAATCC 58.406 55.000 0.00 0.00 34.36 3.01
1663 5235 3.229271 GGTAAATCCCCGCGGGTA 58.771 61.111 40.52 29.44 44.74 3.69
1664 5236 1.227645 GGTAAATCCCCGCGGGTAC 60.228 63.158 40.52 32.74 44.74 3.34
1665 5237 1.689243 GGTAAATCCCCGCGGGTACT 61.689 60.000 40.52 24.29 44.74 2.73
1666 5238 0.249615 GTAAATCCCCGCGGGTACTC 60.250 60.000 40.52 21.80 44.74 2.59
1667 5239 1.737355 TAAATCCCCGCGGGTACTCG 61.737 60.000 40.52 25.87 44.74 4.18
1668 5240 4.828296 ATCCCCGCGGGTACTCGT 62.828 66.667 40.52 17.74 44.74 4.18
1674 5246 4.139234 GCGGGTACTCGTCCCCAC 62.139 72.222 17.95 0.00 41.30 4.61
1676 5248 3.455469 GGGTACTCGTCCCCACGG 61.455 72.222 0.00 0.00 46.70 4.94
1688 5260 4.997884 CCACGGGGAATATTGCCA 57.002 55.556 25.37 0.00 40.96 4.92
1689 5261 3.437642 CCACGGGGAATATTGCCAT 57.562 52.632 25.37 11.65 40.96 4.40
1690 5262 1.247567 CCACGGGGAATATTGCCATC 58.752 55.000 25.37 9.82 40.96 3.51
1691 5263 1.202927 CCACGGGGAATATTGCCATCT 60.203 52.381 25.37 5.98 40.96 2.90
1692 5264 2.586425 CACGGGGAATATTGCCATCTT 58.414 47.619 25.37 5.36 40.96 2.40
1693 5265 2.294233 CACGGGGAATATTGCCATCTTG 59.706 50.000 25.37 13.00 40.96 3.02
1694 5266 2.174639 ACGGGGAATATTGCCATCTTGA 59.825 45.455 25.37 0.00 40.96 3.02
1695 5267 2.554032 CGGGGAATATTGCCATCTTGAC 59.446 50.000 25.37 7.14 40.96 3.18
1696 5268 3.565307 GGGGAATATTGCCATCTTGACA 58.435 45.455 25.37 0.00 40.96 3.58
1697 5269 4.154942 GGGGAATATTGCCATCTTGACAT 58.845 43.478 25.37 0.00 40.96 3.06
1698 5270 4.021719 GGGGAATATTGCCATCTTGACATG 60.022 45.833 25.37 0.00 40.96 3.21
1699 5271 4.021719 GGGAATATTGCCATCTTGACATGG 60.022 45.833 20.23 0.00 45.70 3.66
1700 5272 4.828939 GGAATATTGCCATCTTGACATGGA 59.171 41.667 3.55 0.00 45.79 3.41
1701 5273 5.302568 GGAATATTGCCATCTTGACATGGAA 59.697 40.000 3.55 0.00 45.79 3.53
1702 5274 6.014840 GGAATATTGCCATCTTGACATGGAAT 60.015 38.462 3.55 3.81 45.79 3.01
1724 5296 2.348998 CCAGAGAGGTGGTGTGGC 59.651 66.667 0.00 0.00 32.32 5.01
1725 5297 2.519622 CCAGAGAGGTGGTGTGGCA 61.520 63.158 0.00 0.00 32.32 4.92
1733 5305 1.423541 AGGTGGTGTGGCACAGAATTA 59.576 47.619 22.75 2.79 41.80 1.40
1735 5307 2.825532 GGTGGTGTGGCACAGAATTAAT 59.174 45.455 22.75 0.00 41.80 1.40
1771 5343 6.716628 TCTCTATTCAGTTCAATTGTTTGGCT 59.283 34.615 5.13 0.00 33.44 4.75
1774 5346 5.534207 TTCAGTTCAATTGTTTGGCTGAT 57.466 34.783 5.13 0.00 40.90 2.90
1804 5376 1.753073 GCAATCCATCAAGGTCCTTGG 59.247 52.381 27.79 15.70 41.33 3.61
1831 5403 5.643379 TTAAAGAAAAGGCGCTGATGATT 57.357 34.783 7.64 0.00 0.00 2.57
1878 5450 3.242739 CCTGAAACGGTGAAACTTGACAG 60.243 47.826 0.00 0.00 36.74 3.51
1907 5479 5.936686 GACATGGTGTCAGATTCATATGG 57.063 43.478 2.13 0.00 46.22 2.74
1910 5482 5.104402 ACATGGTGTCAGATTCATATGGTCA 60.104 40.000 2.13 0.00 0.00 4.02
1913 5485 4.813161 GGTGTCAGATTCATATGGTCACTG 59.187 45.833 2.13 8.03 31.07 3.66
1993 5573 1.473278 ACGGACCTTCAGATCGTTCTC 59.527 52.381 0.00 0.00 0.00 2.87
2155 5735 1.005867 CATGTGTGGCTTGTTGGGC 60.006 57.895 0.00 0.00 0.00 5.36
2212 5792 4.147321 CTGTTGATAAGATGGAATGGGGG 58.853 47.826 0.00 0.00 0.00 5.40
2266 5846 3.591254 AAGAGGACGCGGTTCAGGC 62.591 63.158 12.47 0.00 0.00 4.85
2278 5858 3.505790 TTCAGGCCGTGGCAATGGT 62.506 57.895 13.76 0.00 44.11 3.55
2286 5867 3.575247 TGGCAATGGTCGGGGTGT 61.575 61.111 0.00 0.00 0.00 4.16
2423 6004 0.820226 TCCCGAGAGAGTTGATGCTG 59.180 55.000 0.00 0.00 0.00 4.41
2481 6062 1.523154 GCACTGCGTTGGATTTCCCA 61.523 55.000 0.00 0.00 44.93 4.37
2771 6354 8.217778 GCAAGTAATAAAGCGATAGAGATTGAC 58.782 37.037 0.00 0.00 39.76 3.18
2865 6448 6.657541 GGTGGGTGAACAAATTACTATTGAGA 59.342 38.462 0.00 0.00 0.00 3.27
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
49 51 7.396339 TGTCTAGTAGCCTGAAAACTAATCTCA 59.604 37.037 0.00 0.00 0.00 3.27
69 71 3.486375 CGCCATTGCAAGTGAATGTCTAG 60.486 47.826 4.94 0.00 37.32 2.43
192 194 0.830648 CCACCTTCCTGCCTTATCGA 59.169 55.000 0.00 0.00 0.00 3.59
223 225 0.461163 AACATAGCGCATGCACCGTA 60.461 50.000 19.57 3.12 46.23 4.02
305 307 1.332375 TGCAACGGGAGAAAAAGTTCG 59.668 47.619 0.00 0.00 38.90 3.95
390 410 4.385825 ACTTCTGTCAATCCACGCTTTAA 58.614 39.130 0.00 0.00 0.00 1.52
397 420 5.240891 TCAGATGAACTTCTGTCAATCCAC 58.759 41.667 14.30 0.00 43.02 4.02
521 544 1.068121 CCCTTGACCTCCTCCACTTT 58.932 55.000 0.00 0.00 0.00 2.66
670 4238 3.642141 AGGGGAGTGAAAAACATGTGTT 58.358 40.909 0.00 0.00 40.50 3.32
671 4239 3.312736 AGGGGAGTGAAAAACATGTGT 57.687 42.857 0.00 0.00 0.00 3.72
672 4240 3.891366 AGAAGGGGAGTGAAAAACATGTG 59.109 43.478 0.00 0.00 0.00 3.21
673 4241 3.891366 CAGAAGGGGAGTGAAAAACATGT 59.109 43.478 0.00 0.00 0.00 3.21
674 4242 3.305608 GCAGAAGGGGAGTGAAAAACATG 60.306 47.826 0.00 0.00 0.00 3.21
675 4243 2.893489 GCAGAAGGGGAGTGAAAAACAT 59.107 45.455 0.00 0.00 0.00 2.71
676 4244 2.306847 GCAGAAGGGGAGTGAAAAACA 58.693 47.619 0.00 0.00 0.00 2.83
677 4245 2.306847 TGCAGAAGGGGAGTGAAAAAC 58.693 47.619 0.00 0.00 0.00 2.43
678 4246 2.746279 TGCAGAAGGGGAGTGAAAAA 57.254 45.000 0.00 0.00 0.00 1.94
679 4247 2.517959 CATGCAGAAGGGGAGTGAAAA 58.482 47.619 0.00 0.00 0.00 2.29
680 4248 1.272092 CCATGCAGAAGGGGAGTGAAA 60.272 52.381 0.00 0.00 0.00 2.69
681 4249 0.329261 CCATGCAGAAGGGGAGTGAA 59.671 55.000 0.00 0.00 0.00 3.18
682 4250 1.993653 CCATGCAGAAGGGGAGTGA 59.006 57.895 0.00 0.00 0.00 3.41
683 4251 1.751927 GCCATGCAGAAGGGGAGTG 60.752 63.158 0.00 0.00 0.00 3.51
684 4252 1.927527 AGCCATGCAGAAGGGGAGT 60.928 57.895 0.00 0.00 0.00 3.85
685 4253 1.453379 CAGCCATGCAGAAGGGGAG 60.453 63.158 0.00 0.00 0.00 4.30
686 4254 1.918467 CTCAGCCATGCAGAAGGGGA 61.918 60.000 0.00 0.00 0.00 4.81
687 4255 1.453379 CTCAGCCATGCAGAAGGGG 60.453 63.158 0.00 0.00 0.00 4.79
688 4256 0.543277 TACTCAGCCATGCAGAAGGG 59.457 55.000 0.00 0.00 0.00 3.95
689 4257 1.483827 TCTACTCAGCCATGCAGAAGG 59.516 52.381 0.00 0.00 0.00 3.46
690 4258 2.975732 TCTACTCAGCCATGCAGAAG 57.024 50.000 0.00 0.00 0.00 2.85
691 4259 3.244526 TGTTTCTACTCAGCCATGCAGAA 60.245 43.478 0.00 0.00 0.00 3.02
692 4260 2.302733 TGTTTCTACTCAGCCATGCAGA 59.697 45.455 0.00 0.00 0.00 4.26
693 4261 2.417933 GTGTTTCTACTCAGCCATGCAG 59.582 50.000 0.00 0.00 0.00 4.41
694 4262 2.224499 TGTGTTTCTACTCAGCCATGCA 60.224 45.455 0.00 0.00 0.00 3.96
695 4263 2.160417 GTGTGTTTCTACTCAGCCATGC 59.840 50.000 0.00 0.00 0.00 4.06
696 4264 2.413112 CGTGTGTTTCTACTCAGCCATG 59.587 50.000 0.00 0.00 0.00 3.66
697 4265 2.037251 ACGTGTGTTTCTACTCAGCCAT 59.963 45.455 0.00 0.00 0.00 4.40
698 4266 1.411246 ACGTGTGTTTCTACTCAGCCA 59.589 47.619 0.00 0.00 0.00 4.75
699 4267 2.150397 ACGTGTGTTTCTACTCAGCC 57.850 50.000 0.00 0.00 0.00 4.85
700 4268 4.296690 ACTTACGTGTGTTTCTACTCAGC 58.703 43.478 0.00 0.00 0.00 4.26
701 4269 5.175126 CCAACTTACGTGTGTTTCTACTCAG 59.825 44.000 0.00 0.00 0.00 3.35
702 4270 5.045215 CCAACTTACGTGTGTTTCTACTCA 58.955 41.667 0.00 0.00 0.00 3.41
703 4271 5.284079 TCCAACTTACGTGTGTTTCTACTC 58.716 41.667 0.00 0.00 0.00 2.59
704 4272 5.266733 TCCAACTTACGTGTGTTTCTACT 57.733 39.130 0.00 0.00 0.00 2.57
705 4273 7.823149 ATATCCAACTTACGTGTGTTTCTAC 57.177 36.000 0.00 0.00 0.00 2.59
736 4304 6.098266 ACAGGCTTCCAAGTAAACATCTTTTT 59.902 34.615 0.00 0.00 0.00 1.94
737 4305 5.598417 ACAGGCTTCCAAGTAAACATCTTTT 59.402 36.000 0.00 0.00 0.00 2.27
738 4306 5.010012 CACAGGCTTCCAAGTAAACATCTTT 59.990 40.000 0.00 0.00 0.00 2.52
739 4307 4.520492 CACAGGCTTCCAAGTAAACATCTT 59.480 41.667 0.00 0.00 0.00 2.40
740 4308 4.074970 CACAGGCTTCCAAGTAAACATCT 58.925 43.478 0.00 0.00 0.00 2.90
741 4309 3.191371 CCACAGGCTTCCAAGTAAACATC 59.809 47.826 0.00 0.00 0.00 3.06
742 4310 3.157087 CCACAGGCTTCCAAGTAAACAT 58.843 45.455 0.00 0.00 0.00 2.71
743 4311 2.092103 ACCACAGGCTTCCAAGTAAACA 60.092 45.455 0.00 0.00 0.00 2.83
744 4312 2.583143 ACCACAGGCTTCCAAGTAAAC 58.417 47.619 0.00 0.00 0.00 2.01
745 4313 4.331968 CATACCACAGGCTTCCAAGTAAA 58.668 43.478 0.00 0.00 0.00 2.01
746 4314 3.872240 GCATACCACAGGCTTCCAAGTAA 60.872 47.826 0.00 0.00 0.00 2.24
747 4315 2.355716 GCATACCACAGGCTTCCAAGTA 60.356 50.000 0.00 0.00 0.00 2.24
748 4316 1.614317 GCATACCACAGGCTTCCAAGT 60.614 52.381 0.00 0.00 0.00 3.16
749 4317 1.098050 GCATACCACAGGCTTCCAAG 58.902 55.000 0.00 0.00 0.00 3.61
750 4318 0.403655 TGCATACCACAGGCTTCCAA 59.596 50.000 0.00 0.00 34.20 3.53
751 4319 0.035152 CTGCATACCACAGGCTTCCA 60.035 55.000 0.00 0.00 34.20 3.53
752 4320 0.253044 TCTGCATACCACAGGCTTCC 59.747 55.000 0.00 0.00 35.78 3.46
753 4321 1.945394 CATCTGCATACCACAGGCTTC 59.055 52.381 0.00 0.00 35.78 3.86
754 4322 1.283029 ACATCTGCATACCACAGGCTT 59.717 47.619 0.00 0.00 35.78 4.35
755 4323 0.914644 ACATCTGCATACCACAGGCT 59.085 50.000 0.00 0.00 35.78 4.58
756 4324 2.620251 TACATCTGCATACCACAGGC 57.380 50.000 0.00 0.00 35.78 4.85
757 4325 4.333649 CACTTTACATCTGCATACCACAGG 59.666 45.833 0.00 0.00 35.78 4.00
758 4326 4.937620 ACACTTTACATCTGCATACCACAG 59.062 41.667 0.00 0.00 36.44 3.66
759 4327 4.905429 ACACTTTACATCTGCATACCACA 58.095 39.130 0.00 0.00 0.00 4.17
760 4328 5.880054 AACACTTTACATCTGCATACCAC 57.120 39.130 0.00 0.00 0.00 4.16
761 4329 6.892658 AAAACACTTTACATCTGCATACCA 57.107 33.333 0.00 0.00 0.00 3.25
783 4351 6.769512 AGTCATTGAGCTAGACACCTAAAAA 58.230 36.000 0.00 0.00 34.80 1.94
784 4352 6.360370 AGTCATTGAGCTAGACACCTAAAA 57.640 37.500 0.00 0.00 34.80 1.52
785 4353 6.360370 AAGTCATTGAGCTAGACACCTAAA 57.640 37.500 0.00 0.00 34.80 1.85
786 4354 6.360370 AAAGTCATTGAGCTAGACACCTAA 57.640 37.500 0.00 0.00 34.80 2.69
787 4355 6.166279 CAAAAGTCATTGAGCTAGACACCTA 58.834 40.000 0.00 0.00 34.80 3.08
788 4356 4.899352 AAAGTCATTGAGCTAGACACCT 57.101 40.909 0.00 0.00 34.80 4.00
789 4357 4.757149 ACAAAAGTCATTGAGCTAGACACC 59.243 41.667 0.00 0.00 34.80 4.16
790 4358 5.388890 CGACAAAAGTCATTGAGCTAGACAC 60.389 44.000 0.00 0.00 34.80 3.67
791 4359 4.686091 CGACAAAAGTCATTGAGCTAGACA 59.314 41.667 0.00 0.00 34.80 3.41
792 4360 4.434857 GCGACAAAAGTCATTGAGCTAGAC 60.435 45.833 0.00 0.00 35.91 2.59
793 4361 3.679980 GCGACAAAAGTCATTGAGCTAGA 59.320 43.478 0.00 0.00 35.91 2.43
794 4362 3.181516 GGCGACAAAAGTCATTGAGCTAG 60.182 47.826 0.00 0.00 37.50 3.42
795 4363 2.742053 GGCGACAAAAGTCATTGAGCTA 59.258 45.455 0.00 0.00 37.50 3.32
796 4364 1.537202 GGCGACAAAAGTCATTGAGCT 59.463 47.619 0.00 0.00 37.50 4.09
797 4365 1.537202 AGGCGACAAAAGTCATTGAGC 59.463 47.619 0.00 0.00 37.04 4.26
798 4366 3.372206 CCTAGGCGACAAAAGTCATTGAG 59.628 47.826 0.00 0.00 34.38 3.02
799 4367 3.334691 CCTAGGCGACAAAAGTCATTGA 58.665 45.455 0.00 0.00 34.38 2.57
800 4368 2.420022 CCCTAGGCGACAAAAGTCATTG 59.580 50.000 2.05 0.00 36.37 2.82
801 4369 2.711542 CCCTAGGCGACAAAAGTCATT 58.288 47.619 2.05 0.00 0.00 2.57
802 4370 1.679032 GCCCTAGGCGACAAAAGTCAT 60.679 52.381 2.05 0.00 39.62 3.06
803 4371 0.321298 GCCCTAGGCGACAAAAGTCA 60.321 55.000 2.05 0.00 39.62 3.41
804 4372 2.467962 GCCCTAGGCGACAAAAGTC 58.532 57.895 2.05 0.00 39.62 3.01
805 4373 4.716003 GCCCTAGGCGACAAAAGT 57.284 55.556 2.05 0.00 39.62 2.66
815 4383 3.857764 CTAGGTCGTGGCCCTAGG 58.142 66.667 0.06 0.06 45.26 3.02
817 4385 2.172229 AACCCTAGGTCGTGGCCCTA 62.172 60.000 8.29 0.00 33.12 3.53
818 4386 3.557695 AACCCTAGGTCGTGGCCCT 62.558 63.158 8.29 0.00 33.12 5.19
819 4387 3.007323 AACCCTAGGTCGTGGCCC 61.007 66.667 8.29 0.00 33.12 5.80
820 4388 1.957765 GAGAACCCTAGGTCGTGGCC 61.958 65.000 8.29 0.00 33.12 5.36
821 4389 1.516423 GAGAACCCTAGGTCGTGGC 59.484 63.158 8.29 0.00 33.12 5.01
822 4390 0.324460 AGGAGAACCCTAGGTCGTGG 60.324 60.000 8.29 0.00 45.48 4.94
823 4391 0.818296 CAGGAGAACCCTAGGTCGTG 59.182 60.000 8.29 6.72 45.60 4.35
824 4392 0.408700 ACAGGAGAACCCTAGGTCGT 59.591 55.000 8.29 0.00 45.60 4.34
825 4393 1.104630 GACAGGAGAACCCTAGGTCG 58.895 60.000 8.29 0.00 45.60 4.79
826 4394 1.007359 AGGACAGGAGAACCCTAGGTC 59.993 57.143 8.29 0.00 45.60 3.85
862 4430 3.565482 TCAACTGCAATGTGAAACTCTCC 59.435 43.478 0.00 0.00 38.04 3.71
872 4443 0.239347 GCGCTCTTCAACTGCAATGT 59.761 50.000 0.00 0.00 0.00 2.71
875 4446 1.944035 CAGCGCTCTTCAACTGCAA 59.056 52.632 7.13 0.00 0.00 4.08
876 4447 3.646554 CAGCGCTCTTCAACTGCA 58.353 55.556 7.13 0.00 0.00 4.41
879 4450 1.670406 CTGGCAGCGCTCTTCAACT 60.670 57.895 7.13 0.00 0.00 3.16
899 4470 2.040544 AATCCAGGAACAAGGCGCG 61.041 57.895 0.00 0.00 0.00 6.86
913 4484 4.506255 CCCGTGGGAGGCCAATCC 62.506 72.222 5.01 3.40 38.76 3.01
938 4509 3.057806 TGCGATGAGACAGAAACGAACTA 60.058 43.478 0.00 0.00 0.00 2.24
944 4515 2.953020 AGTCTGCGATGAGACAGAAAC 58.047 47.619 11.00 0.00 44.14 2.78
945 4516 4.486090 GTTAGTCTGCGATGAGACAGAAA 58.514 43.478 11.00 2.11 44.14 2.52
952 4523 2.544685 CAAGGGTTAGTCTGCGATGAG 58.455 52.381 0.00 0.00 0.00 2.90
956 4527 1.080093 CGCAAGGGTTAGTCTGCGA 60.080 57.895 9.53 0.00 46.89 5.10
971 4542 2.662596 CTTCACTACAGCCCCGCA 59.337 61.111 0.00 0.00 0.00 5.69
973 4544 0.541863 AATCCTTCACTACAGCCCCG 59.458 55.000 0.00 0.00 0.00 5.73
976 4547 4.833390 ACTTACAATCCTTCACTACAGCC 58.167 43.478 0.00 0.00 0.00 4.85
978 4549 6.536582 CCATGACTTACAATCCTTCACTACAG 59.463 42.308 0.00 0.00 0.00 2.74
983 4554 3.063997 CGCCATGACTTACAATCCTTCAC 59.936 47.826 0.00 0.00 0.00 3.18
984 4555 3.055458 TCGCCATGACTTACAATCCTTCA 60.055 43.478 0.00 0.00 0.00 3.02
985 4556 3.309954 GTCGCCATGACTTACAATCCTTC 59.690 47.826 0.00 0.00 44.58 3.46
986 4557 3.270877 GTCGCCATGACTTACAATCCTT 58.729 45.455 0.00 0.00 44.58 3.36
988 4559 1.593006 CGTCGCCATGACTTACAATCC 59.407 52.381 0.00 0.00 45.87 3.01
1004 4576 2.792290 CTTGCATCGTCCTGCGTCG 61.792 63.158 0.00 0.00 45.30 5.12
1008 4580 1.094073 ATCTGCTTGCATCGTCCTGC 61.094 55.000 0.00 1.35 42.62 4.85
1029 4601 2.190488 CTTCCGAGCTCTTGCCCCTT 62.190 60.000 12.85 0.00 40.80 3.95
1050 4622 0.854218 TCTCCAGGAGGCTACTAGGG 59.146 60.000 17.10 0.00 33.74 3.53
1089 4661 3.119849 CCCAAACAAGGTTATCAAGCTCG 60.120 47.826 0.00 0.00 38.49 5.03
1104 4676 4.905456 TCCTCTACTTCTTCTTCCCAAACA 59.095 41.667 0.00 0.00 0.00 2.83
1122 4694 1.271434 GGCTTTTCTTCCGGTTCCTCT 60.271 52.381 0.00 0.00 0.00 3.69
1154 4726 0.605319 TGTCAAAACCCTAGCCAGCG 60.605 55.000 0.00 0.00 0.00 5.18
1156 4728 3.486383 TCTTTGTCAAAACCCTAGCCAG 58.514 45.455 0.00 0.00 0.00 4.85
1159 4731 6.332735 AGATTTCTTTGTCAAAACCCTAGC 57.667 37.500 0.00 0.00 0.00 3.42
1174 4746 3.829026 GCCCCTTGACTGAAAGATTTCTT 59.171 43.478 6.84 0.00 38.02 2.52
1205 4777 1.278985 TCCATGTCGCCTTCATGTCTT 59.721 47.619 0.00 0.00 40.43 3.01
1209 4781 2.684374 TGAATTCCATGTCGCCTTCATG 59.316 45.455 2.27 0.00 41.34 3.07
1228 4800 2.725203 CTTCCCCGTTGCGACCTTGA 62.725 60.000 0.00 0.00 0.00 3.02
1229 4801 2.281208 TTCCCCGTTGCGACCTTG 60.281 61.111 0.00 0.00 0.00 3.61
1230 4802 2.032071 CTTCCCCGTTGCGACCTT 59.968 61.111 0.00 0.00 0.00 3.50
1231 4803 4.016706 CCTTCCCCGTTGCGACCT 62.017 66.667 0.00 0.00 0.00 3.85
1237 4809 3.253838 TCACCCCCTTCCCCGTTG 61.254 66.667 0.00 0.00 0.00 4.10
1238 4810 3.254617 GTCACCCCCTTCCCCGTT 61.255 66.667 0.00 0.00 0.00 4.44
1245 4817 4.364686 ATCCCCGGTCACCCCCTT 62.365 66.667 0.00 0.00 0.00 3.95
1248 4820 3.793888 GTCATCCCCGGTCACCCC 61.794 72.222 0.00 0.00 0.00 4.95
1249 4821 2.687566 AGTCATCCCCGGTCACCC 60.688 66.667 0.00 0.00 0.00 4.61
1250 4822 2.732619 GGAGTCATCCCCGGTCACC 61.733 68.421 0.00 0.00 40.03 4.02
1251 4823 1.987855 TGGAGTCATCCCCGGTCAC 60.988 63.158 0.00 0.00 46.04 3.67
1252 4824 1.987855 GTGGAGTCATCCCCGGTCA 60.988 63.158 0.00 0.00 46.04 4.02
1253 4825 2.732619 GGTGGAGTCATCCCCGGTC 61.733 68.421 0.00 0.00 46.04 4.79
1254 4826 2.687566 GGTGGAGTCATCCCCGGT 60.688 66.667 0.00 0.00 46.04 5.28
1255 4827 2.044806 GATGGTGGAGTCATCCCCGG 62.045 65.000 0.00 0.00 46.04 5.73
1256 4828 1.447643 GATGGTGGAGTCATCCCCG 59.552 63.158 0.00 0.00 46.04 5.73
1260 4832 1.447643 CGGGGATGGTGGAGTCATC 59.552 63.158 0.00 0.00 40.02 2.92
1261 4833 2.746375 GCGGGGATGGTGGAGTCAT 61.746 63.158 0.00 0.00 0.00 3.06
1262 4834 3.399181 GCGGGGATGGTGGAGTCA 61.399 66.667 0.00 0.00 0.00 3.41
1263 4835 4.176752 GGCGGGGATGGTGGAGTC 62.177 72.222 0.00 0.00 0.00 3.36
1279 4851 4.643387 GATTGGCGGGGATCGGGG 62.643 72.222 0.00 0.00 39.69 5.73
1280 4852 4.643387 GGATTGGCGGGGATCGGG 62.643 72.222 0.00 0.00 39.69 5.14
1281 4853 4.643387 GGGATTGGCGGGGATCGG 62.643 72.222 0.00 0.00 39.69 4.18
1282 4854 4.643387 GGGGATTGGCGGGGATCG 62.643 72.222 0.00 0.00 42.76 3.69
1283 4855 1.497309 TATGGGGATTGGCGGGGATC 61.497 60.000 0.00 0.00 0.00 3.36
1284 4856 1.465188 TATGGGGATTGGCGGGGAT 60.465 57.895 0.00 0.00 0.00 3.85
1285 4857 2.039298 TATGGGGATTGGCGGGGA 60.039 61.111 0.00 0.00 0.00 4.81
1286 4858 2.115266 GTATGGGGATTGGCGGGG 59.885 66.667 0.00 0.00 0.00 5.73
1287 4859 2.115266 GGTATGGGGATTGGCGGG 59.885 66.667 0.00 0.00 0.00 6.13
1288 4860 2.115266 GGGTATGGGGATTGGCGG 59.885 66.667 0.00 0.00 0.00 6.13
1289 4861 1.528309 GTGGGTATGGGGATTGGCG 60.528 63.158 0.00 0.00 0.00 5.69
1290 4862 1.528309 CGTGGGTATGGGGATTGGC 60.528 63.158 0.00 0.00 0.00 4.52
1291 4863 0.771127 ATCGTGGGTATGGGGATTGG 59.229 55.000 0.00 0.00 0.00 3.16
1292 4864 1.271379 GGATCGTGGGTATGGGGATTG 60.271 57.143 0.00 0.00 0.00 2.67
1293 4865 1.064825 GGATCGTGGGTATGGGGATT 58.935 55.000 0.00 0.00 0.00 3.01
1294 4866 0.840722 GGGATCGTGGGTATGGGGAT 60.841 60.000 0.00 0.00 0.00 3.85
1295 4867 1.460689 GGGATCGTGGGTATGGGGA 60.461 63.158 0.00 0.00 0.00 4.81
1296 4868 2.526046 GGGGATCGTGGGTATGGGG 61.526 68.421 0.00 0.00 0.00 4.96
1297 4869 2.879233 CGGGGATCGTGGGTATGGG 61.879 68.421 0.00 0.00 0.00 4.00
1298 4870 2.741092 CGGGGATCGTGGGTATGG 59.259 66.667 0.00 0.00 0.00 2.74
1307 4879 1.878522 CGAAGCTTCACGGGGATCG 60.879 63.158 25.47 5.76 45.88 3.69
1308 4880 4.110493 CGAAGCTTCACGGGGATC 57.890 61.111 25.47 0.00 0.00 3.36
1321 4893 2.554272 CGTTTTGTCCCCGCGAAG 59.446 61.111 8.23 0.00 0.00 3.79
1322 4894 3.652000 GCGTTTTGTCCCCGCGAA 61.652 61.111 8.23 0.00 37.89 4.70
1340 4912 2.091885 CCGATATTAATGGGGATGGGGG 60.092 54.545 0.00 0.00 0.00 5.40
1341 4913 3.297134 CCGATATTAATGGGGATGGGG 57.703 52.381 0.00 0.00 0.00 4.96
1373 4945 2.741092 CCCATGGATACCCGACGG 59.259 66.667 15.22 6.99 34.29 4.79
1374 4946 1.835267 TCCCCATGGATACCCGACG 60.835 63.158 15.22 0.00 35.03 5.12
1375 4947 4.306245 TCCCCATGGATACCCGAC 57.694 61.111 15.22 0.00 35.03 4.79
1384 4956 0.832626 GGGCTTTGAAATCCCCATGG 59.167 55.000 4.14 4.14 37.46 3.66
1385 4957 1.570803 TGGGCTTTGAAATCCCCATG 58.429 50.000 13.82 0.00 42.41 3.66
1387 4959 0.486879 AGTGGGCTTTGAAATCCCCA 59.513 50.000 13.82 12.38 44.96 4.96
1388 4960 2.379005 CTAGTGGGCTTTGAAATCCCC 58.621 52.381 13.82 10.05 39.30 4.81
1389 4961 2.025321 TCCTAGTGGGCTTTGAAATCCC 60.025 50.000 9.84 9.84 40.47 3.85
1390 4962 3.366052 TCCTAGTGGGCTTTGAAATCC 57.634 47.619 0.00 0.00 34.39 3.01
1391 4963 5.066593 CCTATCCTAGTGGGCTTTGAAATC 58.933 45.833 0.00 0.00 34.39 2.17
1392 4964 4.478686 ACCTATCCTAGTGGGCTTTGAAAT 59.521 41.667 0.00 0.00 34.39 2.17
1393 4965 3.850173 ACCTATCCTAGTGGGCTTTGAAA 59.150 43.478 0.00 0.00 34.39 2.69
1394 4966 3.199946 CACCTATCCTAGTGGGCTTTGAA 59.800 47.826 0.00 0.00 34.39 2.69
1395 4967 2.771943 CACCTATCCTAGTGGGCTTTGA 59.228 50.000 0.00 0.00 34.39 2.69
1396 4968 2.771943 TCACCTATCCTAGTGGGCTTTG 59.228 50.000 0.00 0.00 34.67 2.77
1397 4969 3.041946 CTCACCTATCCTAGTGGGCTTT 58.958 50.000 0.00 0.00 34.67 3.51
1398 4970 2.247635 TCTCACCTATCCTAGTGGGCTT 59.752 50.000 0.00 0.00 34.32 4.35
1399 4971 1.860240 TCTCACCTATCCTAGTGGGCT 59.140 52.381 0.00 0.00 34.32 5.19
1400 4972 2.383442 TCTCACCTATCCTAGTGGGC 57.617 55.000 0.00 0.00 34.32 5.36
1401 4973 4.483950 TCAATCTCACCTATCCTAGTGGG 58.516 47.826 0.00 0.00 35.71 4.61
1402 4974 5.835819 TCTTCAATCTCACCTATCCTAGTGG 59.164 44.000 0.00 0.00 34.67 4.00
1403 4975 6.968263 TCTTCAATCTCACCTATCCTAGTG 57.032 41.667 0.00 0.00 35.24 2.74
1404 4976 7.286775 GTCTTCTTCAATCTCACCTATCCTAGT 59.713 40.741 0.00 0.00 0.00 2.57
1405 4977 7.286546 TGTCTTCTTCAATCTCACCTATCCTAG 59.713 40.741 0.00 0.00 0.00 3.02
1406 4978 7.126061 TGTCTTCTTCAATCTCACCTATCCTA 58.874 38.462 0.00 0.00 0.00 2.94
1407 4979 5.960811 TGTCTTCTTCAATCTCACCTATCCT 59.039 40.000 0.00 0.00 0.00 3.24
1408 4980 6.227298 TGTCTTCTTCAATCTCACCTATCC 57.773 41.667 0.00 0.00 0.00 2.59
1409 4981 6.705381 CCATGTCTTCTTCAATCTCACCTATC 59.295 42.308 0.00 0.00 0.00 2.08
1410 4982 6.157645 ACCATGTCTTCTTCAATCTCACCTAT 59.842 38.462 0.00 0.00 0.00 2.57
1411 4983 5.485353 ACCATGTCTTCTTCAATCTCACCTA 59.515 40.000 0.00 0.00 0.00 3.08
1412 4984 4.288105 ACCATGTCTTCTTCAATCTCACCT 59.712 41.667 0.00 0.00 0.00 4.00
1413 4985 4.583871 ACCATGTCTTCTTCAATCTCACC 58.416 43.478 0.00 0.00 0.00 4.02
1414 4986 4.328440 CGACCATGTCTTCTTCAATCTCAC 59.672 45.833 0.00 0.00 0.00 3.51
1415 4987 4.021104 ACGACCATGTCTTCTTCAATCTCA 60.021 41.667 0.00 0.00 0.00 3.27
1416 4988 4.499183 ACGACCATGTCTTCTTCAATCTC 58.501 43.478 0.00 0.00 0.00 2.75
1417 4989 4.543590 ACGACCATGTCTTCTTCAATCT 57.456 40.909 0.00 0.00 0.00 2.40
1418 4990 4.690748 TCAACGACCATGTCTTCTTCAATC 59.309 41.667 0.00 0.00 0.00 2.67
1419 4991 4.641396 TCAACGACCATGTCTTCTTCAAT 58.359 39.130 0.00 0.00 0.00 2.57
1420 4992 4.058124 CTCAACGACCATGTCTTCTTCAA 58.942 43.478 0.00 0.00 0.00 2.69
1421 4993 3.320826 TCTCAACGACCATGTCTTCTTCA 59.679 43.478 0.00 0.00 0.00 3.02
1422 4994 3.914312 TCTCAACGACCATGTCTTCTTC 58.086 45.455 0.00 0.00 0.00 2.87
1423 4995 3.574396 TCTCTCAACGACCATGTCTTCTT 59.426 43.478 0.00 0.00 0.00 2.52
1424 4996 3.157881 TCTCTCAACGACCATGTCTTCT 58.842 45.455 0.00 0.00 0.00 2.85
1425 4997 3.506810 CTCTCTCAACGACCATGTCTTC 58.493 50.000 0.00 0.00 0.00 2.87
1426 4998 2.232452 CCTCTCTCAACGACCATGTCTT 59.768 50.000 0.00 0.00 0.00 3.01
1427 4999 1.821753 CCTCTCTCAACGACCATGTCT 59.178 52.381 0.00 0.00 0.00 3.41
1428 5000 1.546476 ACCTCTCTCAACGACCATGTC 59.454 52.381 0.00 0.00 0.00 3.06
1429 5001 1.273606 CACCTCTCTCAACGACCATGT 59.726 52.381 0.00 0.00 0.00 3.21
1430 5002 1.404717 CCACCTCTCTCAACGACCATG 60.405 57.143 0.00 0.00 0.00 3.66
1431 5003 0.898320 CCACCTCTCTCAACGACCAT 59.102 55.000 0.00 0.00 0.00 3.55
1432 5004 0.178973 TCCACCTCTCTCAACGACCA 60.179 55.000 0.00 0.00 0.00 4.02
1433 5005 0.528470 CTCCACCTCTCTCAACGACC 59.472 60.000 0.00 0.00 0.00 4.79
1434 5006 1.535833 TCTCCACCTCTCTCAACGAC 58.464 55.000 0.00 0.00 0.00 4.34
1435 5007 2.287977 TTCTCCACCTCTCTCAACGA 57.712 50.000 0.00 0.00 0.00 3.85
1436 5008 3.386768 TTTTCTCCACCTCTCTCAACG 57.613 47.619 0.00 0.00 0.00 4.10
1437 5009 5.308825 TCATTTTTCTCCACCTCTCTCAAC 58.691 41.667 0.00 0.00 0.00 3.18
1438 5010 5.567037 TCATTTTTCTCCACCTCTCTCAA 57.433 39.130 0.00 0.00 0.00 3.02
1439 5011 5.768980 ATCATTTTTCTCCACCTCTCTCA 57.231 39.130 0.00 0.00 0.00 3.27
1440 5012 5.942826 ACAATCATTTTTCTCCACCTCTCTC 59.057 40.000 0.00 0.00 0.00 3.20
1441 5013 5.709164 CACAATCATTTTTCTCCACCTCTCT 59.291 40.000 0.00 0.00 0.00 3.10
1442 5014 5.474876 ACACAATCATTTTTCTCCACCTCTC 59.525 40.000 0.00 0.00 0.00 3.20
1443 5015 5.242393 CACACAATCATTTTTCTCCACCTCT 59.758 40.000 0.00 0.00 0.00 3.69
1444 5016 5.241506 TCACACAATCATTTTTCTCCACCTC 59.758 40.000 0.00 0.00 0.00 3.85
1445 5017 5.139727 TCACACAATCATTTTTCTCCACCT 58.860 37.500 0.00 0.00 0.00 4.00
1446 5018 5.452078 TCACACAATCATTTTTCTCCACC 57.548 39.130 0.00 0.00 0.00 4.61
1447 5019 7.951530 ATTTCACACAATCATTTTTCTCCAC 57.048 32.000 0.00 0.00 0.00 4.02
1448 5020 9.859427 GATATTTCACACAATCATTTTTCTCCA 57.141 29.630 0.00 0.00 0.00 3.86
1501 5073 7.361371 CCGAAAACTATGCCATTTGTACTACAA 60.361 37.037 0.00 0.00 36.11 2.41
1502 5074 6.092944 CCGAAAACTATGCCATTTGTACTACA 59.907 38.462 0.00 0.00 0.00 2.74
1503 5075 6.457799 CCCGAAAACTATGCCATTTGTACTAC 60.458 42.308 0.00 0.00 0.00 2.73
1504 5076 5.587043 CCCGAAAACTATGCCATTTGTACTA 59.413 40.000 0.00 0.00 0.00 1.82
1505 5077 4.398044 CCCGAAAACTATGCCATTTGTACT 59.602 41.667 0.00 0.00 0.00 2.73
1506 5078 4.157105 ACCCGAAAACTATGCCATTTGTAC 59.843 41.667 0.00 0.00 0.00 2.90
1507 5079 4.337145 ACCCGAAAACTATGCCATTTGTA 58.663 39.130 0.00 0.00 0.00 2.41
1508 5080 3.161866 ACCCGAAAACTATGCCATTTGT 58.838 40.909 0.00 0.00 0.00 2.83
1509 5081 3.866883 ACCCGAAAACTATGCCATTTG 57.133 42.857 0.00 0.00 0.00 2.32
1510 5082 4.583073 GGATACCCGAAAACTATGCCATTT 59.417 41.667 0.00 0.00 0.00 2.32
1511 5083 4.142038 GGATACCCGAAAACTATGCCATT 58.858 43.478 0.00 0.00 0.00 3.16
1512 5084 3.137544 TGGATACCCGAAAACTATGCCAT 59.862 43.478 0.00 0.00 34.29 4.40
1513 5085 2.506231 TGGATACCCGAAAACTATGCCA 59.494 45.455 0.00 0.00 34.29 4.92
1514 5086 3.202829 TGGATACCCGAAAACTATGCC 57.797 47.619 0.00 0.00 34.29 4.40
1515 5087 3.502211 CCATGGATACCCGAAAACTATGC 59.498 47.826 5.56 0.00 34.29 3.14
1516 5088 4.968259 TCCATGGATACCCGAAAACTATG 58.032 43.478 11.44 0.00 34.29 2.23
1517 5089 4.658901 ACTCCATGGATACCCGAAAACTAT 59.341 41.667 16.63 0.00 34.29 2.12
1518 5090 4.035112 ACTCCATGGATACCCGAAAACTA 58.965 43.478 16.63 0.00 34.29 2.24
1519 5091 2.844348 ACTCCATGGATACCCGAAAACT 59.156 45.455 16.63 0.00 34.29 2.66
1520 5092 3.203716 GACTCCATGGATACCCGAAAAC 58.796 50.000 16.63 0.00 34.29 2.43
1521 5093 2.171870 GGACTCCATGGATACCCGAAAA 59.828 50.000 16.63 0.00 34.29 2.29
1522 5094 1.766496 GGACTCCATGGATACCCGAAA 59.234 52.381 16.63 0.00 34.29 3.46
1523 5095 1.420430 GGACTCCATGGATACCCGAA 58.580 55.000 16.63 0.00 34.29 4.30
1524 5096 0.471211 GGGACTCCATGGATACCCGA 60.471 60.000 28.86 4.09 32.80 5.14
1525 5097 0.471971 AGGGACTCCATGGATACCCG 60.472 60.000 32.54 19.09 41.12 5.28
1526 5098 2.258109 GTAGGGACTCCATGGATACCC 58.742 57.143 32.43 32.43 41.75 3.69
1527 5099 1.893801 CGTAGGGACTCCATGGATACC 59.106 57.143 16.63 20.01 41.75 2.73
1543 5115 5.051409 TGGGTATAAAATTTCCCCCGTAG 57.949 43.478 9.58 0.00 39.20 3.51
1544 5116 5.457924 GGATGGGTATAAAATTTCCCCCGTA 60.458 44.000 9.58 0.00 39.20 4.02
1545 5117 4.476297 GATGGGTATAAAATTTCCCCCGT 58.524 43.478 9.58 8.84 39.20 5.28
1546 5118 3.830178 GGATGGGTATAAAATTTCCCCCG 59.170 47.826 9.58 0.00 39.20 5.73
1547 5119 4.164981 GGGATGGGTATAAAATTTCCCCC 58.835 47.826 9.58 8.33 39.20 5.40
1549 5121 3.830178 CGGGGATGGGTATAAAATTTCCC 59.170 47.826 5.85 5.85 40.53 3.97
1550 5122 3.257375 GCGGGGATGGGTATAAAATTTCC 59.743 47.826 0.00 0.00 0.00 3.13
1551 5123 4.149598 AGCGGGGATGGGTATAAAATTTC 58.850 43.478 0.00 0.00 0.00 2.17
1552 5124 4.149598 GAGCGGGGATGGGTATAAAATTT 58.850 43.478 0.00 0.00 0.00 1.82
1553 5125 3.499745 GGAGCGGGGATGGGTATAAAATT 60.500 47.826 0.00 0.00 0.00 1.82
1554 5126 2.041216 GGAGCGGGGATGGGTATAAAAT 59.959 50.000 0.00 0.00 0.00 1.82
1555 5127 1.422402 GGAGCGGGGATGGGTATAAAA 59.578 52.381 0.00 0.00 0.00 1.52
1556 5128 1.061546 GGAGCGGGGATGGGTATAAA 58.938 55.000 0.00 0.00 0.00 1.40
1557 5129 0.104882 TGGAGCGGGGATGGGTATAA 60.105 55.000 0.00 0.00 0.00 0.98
1558 5130 0.834687 GTGGAGCGGGGATGGGTATA 60.835 60.000 0.00 0.00 0.00 1.47
1559 5131 2.147387 GTGGAGCGGGGATGGGTAT 61.147 63.158 0.00 0.00 0.00 2.73
1560 5132 2.766651 GTGGAGCGGGGATGGGTA 60.767 66.667 0.00 0.00 0.00 3.69
1563 5135 4.227134 CTCGTGGAGCGGGGATGG 62.227 72.222 0.00 0.00 41.72 3.51
1564 5136 3.147595 TCTCGTGGAGCGGGGATG 61.148 66.667 0.00 0.00 42.39 3.51
1565 5137 2.280404 TAGTCTCGTGGAGCGGGGAT 62.280 60.000 0.00 0.00 42.39 3.85
1566 5138 2.488771 TTAGTCTCGTGGAGCGGGGA 62.489 60.000 0.00 0.00 42.39 4.81
1567 5139 2.050350 TTAGTCTCGTGGAGCGGGG 61.050 63.158 0.00 0.00 42.39 5.73
1568 5140 1.139095 GTTAGTCTCGTGGAGCGGG 59.861 63.158 0.00 0.00 43.78 6.13
1569 5141 1.226323 CGTTAGTCTCGTGGAGCGG 60.226 63.158 0.00 0.00 41.72 5.52
1570 5142 1.226323 CCGTTAGTCTCGTGGAGCG 60.226 63.158 0.00 0.00 43.01 5.03
1571 5143 1.139095 CCCGTTAGTCTCGTGGAGC 59.861 63.158 0.00 0.00 0.00 4.70
1572 5144 1.399791 GTACCCGTTAGTCTCGTGGAG 59.600 57.143 0.00 0.00 0.00 3.86
1573 5145 1.453155 GTACCCGTTAGTCTCGTGGA 58.547 55.000 0.00 0.00 0.00 4.02
1574 5146 0.453390 GGTACCCGTTAGTCTCGTGG 59.547 60.000 0.00 0.00 0.00 4.94
1589 5161 4.283722 CCATAGGTATTCTCTGGTGGGTAC 59.716 50.000 0.00 0.00 35.64 3.34
1590 5162 4.489737 CCATAGGTATTCTCTGGTGGGTA 58.510 47.826 0.00 0.00 35.64 3.69
1591 5163 3.318313 CCATAGGTATTCTCTGGTGGGT 58.682 50.000 0.00 0.00 35.64 4.51
1592 5164 2.639839 CCCATAGGTATTCTCTGGTGGG 59.360 54.545 0.00 0.00 37.87 4.61
1593 5165 2.639839 CCCCATAGGTATTCTCTGGTGG 59.360 54.545 0.00 0.00 37.87 4.61
1594 5166 2.039084 GCCCCATAGGTATTCTCTGGTG 59.961 54.545 0.00 0.00 37.87 4.17
1595 5167 2.089925 AGCCCCATAGGTATTCTCTGGT 60.090 50.000 0.00 0.00 37.87 4.00
1596 5168 2.625639 AGCCCCATAGGTATTCTCTGG 58.374 52.381 0.00 0.00 38.91 3.86
1597 5169 6.380079 AATTAGCCCCATAGGTATTCTCTG 57.620 41.667 0.00 0.00 38.26 3.35
1598 5170 6.332901 ACAAATTAGCCCCATAGGTATTCTCT 59.667 38.462 0.00 0.00 38.26 3.10
1599 5171 6.543735 ACAAATTAGCCCCATAGGTATTCTC 58.456 40.000 0.00 0.00 38.26 2.87
1600 5172 6.467339 GGACAAATTAGCCCCATAGGTATTCT 60.467 42.308 0.00 0.00 38.26 2.40
1601 5173 5.710567 GGACAAATTAGCCCCATAGGTATTC 59.289 44.000 0.00 0.00 38.26 1.75
1602 5174 5.459094 GGGACAAATTAGCCCCATAGGTATT 60.459 44.000 0.00 0.00 38.69 1.89
1603 5175 4.044191 GGGACAAATTAGCCCCATAGGTAT 59.956 45.833 0.00 0.00 38.69 2.73
1604 5176 3.396611 GGGACAAATTAGCCCCATAGGTA 59.603 47.826 0.00 0.00 38.69 3.08
1605 5177 2.177016 GGGACAAATTAGCCCCATAGGT 59.823 50.000 0.00 0.00 38.69 3.08
1606 5178 2.876581 GGGACAAATTAGCCCCATAGG 58.123 52.381 0.00 0.00 38.69 2.57
1612 5184 1.704641 GATGGGGGACAAATTAGCCC 58.295 55.000 0.00 0.00 41.28 5.19
1613 5185 1.704641 GGATGGGGGACAAATTAGCC 58.295 55.000 0.00 0.00 0.00 3.93
1614 5186 1.704641 GGGATGGGGGACAAATTAGC 58.295 55.000 0.00 0.00 0.00 3.09
1615 5187 1.478654 CGGGGATGGGGGACAAATTAG 60.479 57.143 0.00 0.00 0.00 1.73
1616 5188 0.553819 CGGGGATGGGGGACAAATTA 59.446 55.000 0.00 0.00 0.00 1.40
1617 5189 1.309688 CGGGGATGGGGGACAAATT 59.690 57.895 0.00 0.00 0.00 1.82
1618 5190 3.015383 CGGGGATGGGGGACAAAT 58.985 61.111 0.00 0.00 0.00 2.32
1619 5191 4.055227 GCGGGGATGGGGGACAAA 62.055 66.667 0.00 0.00 0.00 2.83
1625 5197 4.275508 CATGGAGCGGGGATGGGG 62.276 72.222 0.00 0.00 0.00 4.96
1626 5198 3.170672 TCATGGAGCGGGGATGGG 61.171 66.667 0.00 0.00 0.00 4.00
1627 5199 2.111878 GTCATGGAGCGGGGATGG 59.888 66.667 0.00 0.00 0.00 3.51
1628 5200 2.280389 CGTCATGGAGCGGGGATG 60.280 66.667 0.00 0.00 0.00 3.51
1629 5201 3.550431 CCGTCATGGAGCGGGGAT 61.550 66.667 13.79 0.00 43.85 3.85
1633 5205 0.179056 ATTTACCCGTCATGGAGCGG 60.179 55.000 14.40 14.40 46.80 5.52
1634 5206 1.217882 GATTTACCCGTCATGGAGCG 58.782 55.000 0.00 0.00 42.00 5.03
1635 5207 1.594331 GGATTTACCCGTCATGGAGC 58.406 55.000 0.00 0.00 42.00 4.70
1670 5242 0.178964 ATGGCAATATTCCCCGTGGG 60.179 55.000 0.00 0.00 46.11 4.61
1671 5243 1.202927 AGATGGCAATATTCCCCGTGG 60.203 52.381 0.00 0.00 0.00 4.94
1672 5244 2.276732 AGATGGCAATATTCCCCGTG 57.723 50.000 0.00 0.00 0.00 4.94
1673 5245 2.174639 TCAAGATGGCAATATTCCCCGT 59.825 45.455 0.00 0.00 0.00 5.28
1674 5246 2.554032 GTCAAGATGGCAATATTCCCCG 59.446 50.000 0.00 0.00 0.00 5.73
1675 5247 3.565307 TGTCAAGATGGCAATATTCCCC 58.435 45.455 0.00 0.00 0.00 4.81
1676 5248 4.021719 CCATGTCAAGATGGCAATATTCCC 60.022 45.833 0.00 0.00 34.67 3.97
1677 5249 4.828939 TCCATGTCAAGATGGCAATATTCC 59.171 41.667 1.35 0.00 42.52 3.01
1678 5250 6.395426 TTCCATGTCAAGATGGCAATATTC 57.605 37.500 1.35 0.00 42.52 1.75
1679 5251 6.014840 GGATTCCATGTCAAGATGGCAATATT 60.015 38.462 0.00 0.00 42.52 1.28
1680 5252 5.479375 GGATTCCATGTCAAGATGGCAATAT 59.521 40.000 0.00 0.00 42.52 1.28
1681 5253 4.828939 GGATTCCATGTCAAGATGGCAATA 59.171 41.667 0.00 0.00 42.52 1.90
1682 5254 3.640029 GGATTCCATGTCAAGATGGCAAT 59.360 43.478 0.00 3.31 42.52 3.56
1683 5255 3.025978 GGATTCCATGTCAAGATGGCAA 58.974 45.455 0.00 0.00 42.52 4.52
1684 5256 2.658285 GGATTCCATGTCAAGATGGCA 58.342 47.619 0.00 0.00 42.52 4.92
1685 5257 1.959282 GGGATTCCATGTCAAGATGGC 59.041 52.381 4.80 0.00 42.52 4.40
1686 5258 2.224606 CGGGATTCCATGTCAAGATGG 58.775 52.381 4.80 0.00 43.96 3.51
1687 5259 1.605710 GCGGGATTCCATGTCAAGATG 59.394 52.381 4.80 0.00 0.00 2.90
1688 5260 1.477558 GGCGGGATTCCATGTCAAGAT 60.478 52.381 4.80 0.00 0.00 2.40
1689 5261 0.107214 GGCGGGATTCCATGTCAAGA 60.107 55.000 4.80 0.00 0.00 3.02
1690 5262 0.394216 TGGCGGGATTCCATGTCAAG 60.394 55.000 4.80 0.00 0.00 3.02
1691 5263 0.394216 CTGGCGGGATTCCATGTCAA 60.394 55.000 4.80 0.00 32.37 3.18
1692 5264 1.224315 CTGGCGGGATTCCATGTCA 59.776 57.895 4.80 3.24 32.37 3.58
1693 5265 0.533755 CTCTGGCGGGATTCCATGTC 60.534 60.000 4.80 0.00 32.37 3.06
1694 5266 0.982852 TCTCTGGCGGGATTCCATGT 60.983 55.000 4.80 0.00 32.37 3.21
1695 5267 0.250209 CTCTCTGGCGGGATTCCATG 60.250 60.000 4.80 0.00 32.37 3.66
1696 5268 1.414061 CCTCTCTGGCGGGATTCCAT 61.414 60.000 4.80 0.00 32.37 3.41
1697 5269 2.066393 CCTCTCTGGCGGGATTCCA 61.066 63.158 4.80 0.00 0.00 3.53
1698 5270 2.066999 ACCTCTCTGGCGGGATTCC 61.067 63.158 0.00 0.00 40.22 3.01
1699 5271 1.144936 CACCTCTCTGGCGGGATTC 59.855 63.158 0.00 0.00 40.22 2.52
1700 5272 2.370445 CCACCTCTCTGGCGGGATT 61.370 63.158 0.00 0.00 40.22 3.01
1701 5273 2.765807 CCACCTCTCTGGCGGGAT 60.766 66.667 0.00 0.00 40.22 3.85
1702 5274 4.316823 ACCACCTCTCTGGCGGGA 62.317 66.667 0.00 0.00 42.30 5.14
1717 5289 3.088532 TGGATTAATTCTGTGCCACACC 58.911 45.455 0.00 0.00 32.73 4.16
1724 5296 9.918630 AGAGAACAAATTTGGATTAATTCTGTG 57.081 29.630 21.74 0.00 33.26 3.66
1735 5307 8.690203 TGAACTGAATAGAGAACAAATTTGGA 57.310 30.769 21.74 1.09 0.00 3.53
1751 5323 5.534207 TCAGCCAAACAATTGAACTGAAT 57.466 34.783 13.59 0.00 41.98 2.57
1771 5343 4.527427 TGATGGATTGCTTTGTTCCAATCA 59.473 37.500 13.37 0.00 45.63 2.57
1774 5346 4.262549 CCTTGATGGATTGCTTTGTTCCAA 60.263 41.667 0.00 0.00 42.53 3.53
1804 5376 3.252458 TCAGCGCCTTTTCTTTAAAGTCC 59.748 43.478 14.74 0.00 41.41 3.85
1815 5387 0.889994 TGCAATCATCAGCGCCTTTT 59.110 45.000 2.29 0.00 0.00 2.27
1818 5390 0.393402 TTCTGCAATCATCAGCGCCT 60.393 50.000 2.29 0.00 0.00 5.52
1828 5400 6.263842 TCTTGAACCCATCATATTCTGCAATC 59.736 38.462 0.00 0.00 38.03 2.67
1831 5403 5.114764 TCTTGAACCCATCATATTCTGCA 57.885 39.130 0.00 0.00 38.03 4.41
1905 5477 4.698201 TTTAGAACCATGTCAGTGACCA 57.302 40.909 20.43 9.10 0.00 4.02
1907 5479 5.048713 CCCTTTTTAGAACCATGTCAGTGAC 60.049 44.000 16.68 16.68 0.00 3.67
1910 5482 5.316987 CTCCCTTTTTAGAACCATGTCAGT 58.683 41.667 0.00 0.00 0.00 3.41
1913 5485 4.079253 TGCTCCCTTTTTAGAACCATGTC 58.921 43.478 0.00 0.00 0.00 3.06
1993 5573 4.344104 ACTCACCAACAAATCCATTAGGG 58.656 43.478 0.00 0.00 34.83 3.53
2066 5646 1.673920 TCTTGCCTTTGTGAAACCGAC 59.326 47.619 0.00 0.00 34.36 4.79
2155 5735 0.659427 CGCACTATTCATGCCAGTGG 59.341 55.000 4.20 4.20 40.03 4.00
2269 5849 3.561120 GACACCCCGACCATTGCCA 62.561 63.158 0.00 0.00 0.00 4.92
2278 5858 1.131303 AATCACCTTGGACACCCCGA 61.131 55.000 0.00 0.00 37.93 5.14
2286 5867 1.879380 CTGCGTCAAAATCACCTTGGA 59.121 47.619 0.00 0.00 0.00 3.53
2407 5988 0.108472 TGGCAGCATCAACTCTCTCG 60.108 55.000 0.00 0.00 0.00 4.04
2423 6004 0.827507 ACCAAGTGTTGTCCCATGGC 60.828 55.000 6.09 0.00 0.00 4.40
2436 6017 3.136626 AGAGGTAGCACTTTTCACCAAGT 59.863 43.478 0.00 0.00 37.49 3.16
2481 6062 2.967201 CTGCATCATCCTCTCCTCTTCT 59.033 50.000 0.00 0.00 0.00 2.85
2771 6354 2.027745 CCCCGGGTCTATTCTCATCATG 60.028 54.545 21.85 0.00 0.00 3.07
3088 6672 2.047061 TCGAGGATAACAAGATGGGGG 58.953 52.381 0.00 0.00 0.00 5.40


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.