Multiple sequence alignment - TraesCS2B01G296600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G296600 chr2B 100.000 3526 0 0 1 3526 414767941 414764416 0.000000e+00 6512
1 TraesCS2B01G296600 chr2B 90.354 933 75 9 3 920 520026738 520025806 0.000000e+00 1210
2 TraesCS2B01G296600 chr2B 98.425 127 1 1 3372 3498 414753422 414753297 4.580000e-54 222
3 TraesCS2B01G296600 chr2B 94.309 123 5 2 3070 3190 414610685 414610563 1.670000e-43 187
4 TraesCS2B01G296600 chr2B 92.308 130 8 2 3065 3192 686039015 686039144 2.160000e-42 183
5 TraesCS2B01G296600 chr2D 95.021 1888 64 15 940 2818 348725405 348723539 0.000000e+00 2939
6 TraesCS2B01G296600 chr2D 97.015 134 3 1 3375 3508 307837487 307837619 1.270000e-54 224
7 TraesCS2B01G296600 chr2D 97.656 128 1 2 3372 3499 307853306 307853431 5.930000e-53 219
8 TraesCS2B01G296600 chr2D 86.022 186 20 3 3195 3375 352908725 352908541 9.990000e-46 195
9 TraesCS2B01G296600 chr2D 98.113 106 2 0 2895 3000 348723476 348723371 6.010000e-43 185
10 TraesCS2B01G296600 chr2D 90.769 130 10 2 3065 3192 497636294 497636165 4.680000e-39 172
11 TraesCS2B01G296600 chr2A 95.862 1716 58 5 940 2647 463932058 463930348 0.000000e+00 2763
12 TraesCS2B01G296600 chr2A 94.152 171 10 0 2895 3065 463930166 463929996 9.710000e-66 261
13 TraesCS2B01G296600 chr2A 95.556 135 5 1 3375 3509 676344633 676344500 7.670000e-52 215
14 TraesCS2B01G296600 chr2A 91.111 135 7 5 2719 2850 463930312 463930180 1.010000e-40 178
15 TraesCS2B01G296600 chr7B 91.551 935 61 5 1 918 434928020 434927087 0.000000e+00 1273
16 TraesCS2B01G296600 chr7B 91.149 757 63 2 3 755 544980726 544981482 0.000000e+00 1024
17 TraesCS2B01G296600 chr7B 86.879 846 108 3 1 844 125334291 125335135 0.000000e+00 944
18 TraesCS2B01G296600 chr7B 85.027 935 121 14 1 918 125264529 125265461 0.000000e+00 933
19 TraesCS2B01G296600 chr7B 84.722 936 123 13 1 918 125228353 125229286 0.000000e+00 918
20 TraesCS2B01G296600 chr7B 84.706 935 124 14 1 918 125300595 125301527 0.000000e+00 917
21 TraesCS2B01G296600 chr5B 89.903 931 81 8 1 919 149709883 149708954 0.000000e+00 1186
22 TraesCS2B01G296600 chr5B 90.529 813 72 3 1 809 481151373 481152184 0.000000e+00 1070
23 TraesCS2B01G296600 chr5B 91.473 129 10 1 3065 3192 375178210 375178082 3.620000e-40 176
24 TraesCS2B01G296600 chr5B 88.889 135 13 2 3060 3192 270007919 270007785 7.830000e-37 165
25 TraesCS2B01G296600 chr3D 96.053 152 5 1 3375 3526 165412214 165412364 2.720000e-61 246
26 TraesCS2B01G296600 chr3D 86.772 189 21 1 3191 3375 436253339 436253151 1.280000e-49 207
27 TraesCS2B01G296600 chr3D 90.000 130 11 2 3065 3192 58039866 58039737 2.180000e-37 167
28 TraesCS2B01G296600 chr7A 97.826 138 1 2 3374 3511 133646972 133647107 1.640000e-58 237
29 TraesCS2B01G296600 chr7A 92.715 151 7 2 3376 3526 669844073 669844219 7.670000e-52 215
30 TraesCS2B01G296600 chr7A 90.076 131 11 2 3064 3192 14437300 14437170 6.050000e-38 169
31 TraesCS2B01G296600 chr3A 94.079 152 7 2 3375 3526 723357938 723358087 2.740000e-56 230
32 TraesCS2B01G296600 chr1D 96.324 136 4 1 3374 3509 357771346 357771212 4.580000e-54 222
33 TraesCS2B01G296600 chr3B 88.344 163 17 2 3191 3352 571996015 571995854 9.990000e-46 195
34 TraesCS2B01G296600 chr7D 90.076 131 11 2 3064 3192 231245977 231246107 6.050000e-38 169
35 TraesCS2B01G296600 chr4B 90.000 130 11 2 3065 3192 590046231 590046360 2.180000e-37 167


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G296600 chr2B 414764416 414767941 3525 True 6512.000000 6512 100.000000 1 3526 1 chr2B.!!$R3 3525
1 TraesCS2B01G296600 chr2B 520025806 520026738 932 True 1210.000000 1210 90.354000 3 920 1 chr2B.!!$R4 917
2 TraesCS2B01G296600 chr2D 348723371 348725405 2034 True 1562.000000 2939 96.567000 940 3000 2 chr2D.!!$R3 2060
3 TraesCS2B01G296600 chr2A 463929996 463932058 2062 True 1067.333333 2763 93.708333 940 3065 3 chr2A.!!$R2 2125
4 TraesCS2B01G296600 chr7B 434927087 434928020 933 True 1273.000000 1273 91.551000 1 918 1 chr7B.!!$R1 917
5 TraesCS2B01G296600 chr7B 544980726 544981482 756 False 1024.000000 1024 91.149000 3 755 1 chr7B.!!$F5 752
6 TraesCS2B01G296600 chr7B 125334291 125335135 844 False 944.000000 944 86.879000 1 844 1 chr7B.!!$F4 843
7 TraesCS2B01G296600 chr7B 125264529 125265461 932 False 933.000000 933 85.027000 1 918 1 chr7B.!!$F2 917
8 TraesCS2B01G296600 chr7B 125228353 125229286 933 False 918.000000 918 84.722000 1 918 1 chr7B.!!$F1 917
9 TraesCS2B01G296600 chr7B 125300595 125301527 932 False 917.000000 917 84.706000 1 918 1 chr7B.!!$F3 917
10 TraesCS2B01G296600 chr5B 149708954 149709883 929 True 1186.000000 1186 89.903000 1 919 1 chr5B.!!$R1 918
11 TraesCS2B01G296600 chr5B 481151373 481152184 811 False 1070.000000 1070 90.529000 1 809 1 chr5B.!!$F1 808

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
927 959 0.034670 GGAGAGCCATCCAAGTGCTT 60.035 55.0 0.00 0.0 39.34 3.91 F
2435 2470 0.036732 TGTGCCGGAAGAAGCTTGAT 59.963 50.0 5.05 0.0 0.00 2.57 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2472 2519 0.034477 CGGGGAAGGCACCAGTTAAT 60.034 55.0 3.41 0.0 37.48 1.40 R
3341 3448 0.035343 GGTACCCCCTTTCTGCACTC 60.035 60.0 0.00 0.0 0.00 3.51 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
79 80 1.402984 GGAACAGATCTGACGAAGCGT 60.403 52.381 29.27 0.63 45.10 5.07
98 99 1.832608 CGGATGGGGAGACGATGGA 60.833 63.158 0.00 0.00 0.00 3.41
103 104 0.252513 TGGGGAGACGATGGAGGAAA 60.253 55.000 0.00 0.00 0.00 3.13
111 112 3.133721 AGACGATGGAGGAAAAGATCTGG 59.866 47.826 0.00 0.00 0.00 3.86
171 172 1.120530 CTCCGCACCCATAAGTACCT 58.879 55.000 0.00 0.00 0.00 3.08
193 194 4.918201 CGAGCCAGGCCCGAATCC 62.918 72.222 10.41 0.00 0.00 3.01
199 200 1.445942 CAGGCCCGAATCCGTACAT 59.554 57.895 0.00 0.00 0.00 2.29
325 339 4.845580 CCAGGCCTAGCAGCACCG 62.846 72.222 3.98 0.00 0.00 4.94
386 400 2.225293 CCCGATCCCAGATCTAGGGTTA 60.225 54.545 22.26 10.49 46.82 2.85
450 464 3.000080 GCGAGCCAACACGAGAACG 62.000 63.158 0.00 0.00 45.75 3.95
574 588 4.344865 GCCTCCACGGAAGGCCAA 62.345 66.667 5.01 0.00 42.52 4.52
920 952 1.074926 GGGAGAGGAGAGCCATCCA 60.075 63.158 7.50 0.00 41.66 3.41
921 953 0.692419 GGGAGAGGAGAGCCATCCAA 60.692 60.000 7.50 0.00 41.66 3.53
922 954 0.758123 GGAGAGGAGAGCCATCCAAG 59.242 60.000 7.50 0.00 42.26 3.61
923 955 1.494960 GAGAGGAGAGCCATCCAAGT 58.505 55.000 7.50 0.00 42.26 3.16
924 956 1.138661 GAGAGGAGAGCCATCCAAGTG 59.861 57.143 7.50 0.00 42.26 3.16
925 957 0.463474 GAGGAGAGCCATCCAAGTGC 60.463 60.000 7.50 0.00 42.26 4.40
926 958 0.913451 AGGAGAGCCATCCAAGTGCT 60.913 55.000 7.50 0.00 42.26 4.40
927 959 0.034670 GGAGAGCCATCCAAGTGCTT 60.035 55.000 0.00 0.00 39.34 3.91
928 960 1.377536 GAGAGCCATCCAAGTGCTTC 58.622 55.000 0.00 0.00 34.99 3.86
929 961 0.694771 AGAGCCATCCAAGTGCTTCA 59.305 50.000 0.00 0.00 34.99 3.02
930 962 1.074405 AGAGCCATCCAAGTGCTTCAA 59.926 47.619 0.00 0.00 34.99 2.69
931 963 1.888512 GAGCCATCCAAGTGCTTCAAA 59.111 47.619 0.00 0.00 34.99 2.69
932 964 1.615392 AGCCATCCAAGTGCTTCAAAC 59.385 47.619 0.00 0.00 29.17 2.93
933 965 1.666888 GCCATCCAAGTGCTTCAAACG 60.667 52.381 0.00 0.00 0.00 3.60
934 966 1.666888 CCATCCAAGTGCTTCAAACGC 60.667 52.381 0.00 0.00 0.00 4.84
935 967 0.598065 ATCCAAGTGCTTCAAACGCC 59.402 50.000 0.00 0.00 0.00 5.68
936 968 0.465460 TCCAAGTGCTTCAAACGCCT 60.465 50.000 0.00 0.00 0.00 5.52
937 969 0.040067 CCAAGTGCTTCAAACGCCTC 60.040 55.000 0.00 0.00 0.00 4.70
938 970 0.662619 CAAGTGCTTCAAACGCCTCA 59.337 50.000 0.00 0.00 0.00 3.86
1006 1038 2.281091 CCTCCCCAGCAATGGCAT 59.719 61.111 0.00 0.00 44.61 4.40
1290 1325 3.689002 CTCCCGGGAGCTCAAAGGC 62.689 68.421 36.90 0.00 35.31 4.35
1323 1358 1.382420 CAGGACCCTCCTCTCCCTG 60.382 68.421 0.00 0.00 45.66 4.45
1596 1631 3.255149 CGGCCACCGTATACTTCTCTAAT 59.745 47.826 2.24 0.00 42.73 1.73
1602 1637 6.203530 CCACCGTATACTTCTCTAATCACGTA 59.796 42.308 0.56 0.00 0.00 3.57
1680 1715 0.324614 ACTGGATCAACGTGATGGCA 59.675 50.000 5.41 0.00 37.20 4.92
1776 1811 3.338126 CTCGGTGAGCTACGGCGTT 62.338 63.158 21.24 0.00 44.37 4.84
1855 1890 4.309950 GCCGGTCGTGGTTCCTGT 62.310 66.667 1.90 0.00 0.00 4.00
2151 2186 2.142239 GGTGAACTACGACGACGCG 61.142 63.158 3.53 3.53 43.96 6.01
2186 2221 1.543802 CAGGAGAGGTCAGTGAGTGTC 59.456 57.143 0.00 0.00 0.00 3.67
2296 2331 4.091424 CAGAGCAAAATTTCGTCGGATTC 58.909 43.478 0.00 0.00 0.00 2.52
2309 2344 0.801067 CGGATTCGAGGAACGTCACC 60.801 60.000 0.00 3.90 43.13 4.02
2405 2440 4.451150 GTGCCGAGGTCCGCATCA 62.451 66.667 0.00 0.00 36.84 3.07
2412 2447 1.576356 GAGGTCCGCATCATTCTCAC 58.424 55.000 0.00 0.00 0.00 3.51
2430 2465 3.435186 GGCTGTGCCGGAAGAAGC 61.435 66.667 5.05 7.15 39.62 3.86
2431 2466 2.359230 GCTGTGCCGGAAGAAGCT 60.359 61.111 5.05 0.00 0.00 3.74
2432 2467 1.968540 GCTGTGCCGGAAGAAGCTT 60.969 57.895 5.05 0.00 0.00 3.74
2433 2468 1.871772 CTGTGCCGGAAGAAGCTTG 59.128 57.895 5.05 0.00 0.00 4.01
2434 2469 0.603707 CTGTGCCGGAAGAAGCTTGA 60.604 55.000 5.05 0.00 0.00 3.02
2435 2470 0.036732 TGTGCCGGAAGAAGCTTGAT 59.963 50.000 5.05 0.00 0.00 2.57
2436 2471 0.449388 GTGCCGGAAGAAGCTTGATG 59.551 55.000 5.05 0.00 0.00 3.07
2437 2472 1.308069 TGCCGGAAGAAGCTTGATGC 61.308 55.000 5.05 0.00 43.29 3.91
2470 2517 8.198109 GCATTTGTCTGTACTAATTCTCCTCTA 58.802 37.037 0.00 0.00 30.07 2.43
2524 2582 3.026707 TCACTCCAACATCGAGGGATA 57.973 47.619 0.69 0.00 34.82 2.59
2555 2613 1.619654 TGTAGCATGCCAGCAGTTTT 58.380 45.000 15.66 0.00 36.85 2.43
2716 2806 3.133691 TGACTTTGAGCTTACAGCACTG 58.866 45.455 0.00 0.00 45.56 3.66
2736 2826 6.021596 CACTGTGTATAAACGAAATTGCTCC 58.978 40.000 0.00 0.00 0.00 4.70
2769 2859 2.443255 ACAACCTGAGGACAGTTGGATT 59.557 45.455 4.99 0.00 42.05 3.01
2770 2860 2.816087 CAACCTGAGGACAGTTGGATTG 59.184 50.000 4.99 0.00 42.05 2.67
2841 2948 2.226602 TCGTCCACAAAACATCGTGA 57.773 45.000 0.00 0.00 35.02 4.35
2843 2950 1.194547 CGTCCACAAAACATCGTGAGG 59.805 52.381 0.00 0.00 35.02 3.86
2844 2951 1.069227 GTCCACAAAACATCGTGAGGC 60.069 52.381 0.00 0.00 35.02 4.70
2845 2952 0.950836 CCACAAAACATCGTGAGGCA 59.049 50.000 0.00 0.00 35.02 4.75
2850 2957 1.686355 AAACATCGTGAGGCAACCAA 58.314 45.000 0.00 0.00 37.17 3.67
2851 2958 0.951558 AACATCGTGAGGCAACCAAC 59.048 50.000 0.00 0.00 37.17 3.77
2853 2960 0.238289 CATCGTGAGGCAACCAACAC 59.762 55.000 0.00 0.00 32.82 3.32
2857 2964 4.081050 GAGGCAACCAACACCTCC 57.919 61.111 0.00 0.00 43.54 4.30
2860 2967 1.603739 GGCAACCAACACCTCCTCC 60.604 63.158 0.00 0.00 0.00 4.30
2861 2968 1.966451 GCAACCAACACCTCCTCCG 60.966 63.158 0.00 0.00 0.00 4.63
2862 2969 1.966451 CAACCAACACCTCCTCCGC 60.966 63.158 0.00 0.00 0.00 5.54
2863 2970 3.530910 AACCAACACCTCCTCCGCG 62.531 63.158 0.00 0.00 0.00 6.46
2865 2972 4.379243 CAACACCTCCTCCGCGCT 62.379 66.667 5.56 0.00 0.00 5.92
2866 2973 3.626924 AACACCTCCTCCGCGCTT 61.627 61.111 5.56 0.00 0.00 4.68
2867 2974 3.591254 AACACCTCCTCCGCGCTTC 62.591 63.158 5.56 0.00 0.00 3.86
2868 2975 3.764466 CACCTCCTCCGCGCTTCT 61.764 66.667 5.56 0.00 0.00 2.85
2869 2976 3.453679 ACCTCCTCCGCGCTTCTC 61.454 66.667 5.56 0.00 0.00 2.87
2870 2977 3.144193 CCTCCTCCGCGCTTCTCT 61.144 66.667 5.56 0.00 0.00 3.10
2871 2978 2.716017 CCTCCTCCGCGCTTCTCTT 61.716 63.158 5.56 0.00 0.00 2.85
2872 2979 1.226831 CTCCTCCGCGCTTCTCTTC 60.227 63.158 5.56 0.00 0.00 2.87
2873 2980 2.202810 CCTCCGCGCTTCTCTTCC 60.203 66.667 5.56 0.00 0.00 3.46
2874 2981 2.573869 CTCCGCGCTTCTCTTCCA 59.426 61.111 5.56 0.00 0.00 3.53
2875 2982 1.807573 CTCCGCGCTTCTCTTCCAC 60.808 63.158 5.56 0.00 0.00 4.02
2876 2983 2.815647 CCGCGCTTCTCTTCCACC 60.816 66.667 5.56 0.00 0.00 4.61
2877 2984 2.815647 CGCGCTTCTCTTCCACCC 60.816 66.667 5.56 0.00 0.00 4.61
2878 2985 2.436824 GCGCTTCTCTTCCACCCC 60.437 66.667 0.00 0.00 0.00 4.95
2879 2986 2.960688 GCGCTTCTCTTCCACCCCT 61.961 63.158 0.00 0.00 0.00 4.79
2880 2987 1.614241 GCGCTTCTCTTCCACCCCTA 61.614 60.000 0.00 0.00 0.00 3.53
2881 2988 1.123928 CGCTTCTCTTCCACCCCTAT 58.876 55.000 0.00 0.00 0.00 2.57
2882 2989 1.486726 CGCTTCTCTTCCACCCCTATT 59.513 52.381 0.00 0.00 0.00 1.73
2883 2990 2.743183 CGCTTCTCTTCCACCCCTATTG 60.743 54.545 0.00 0.00 0.00 1.90
2884 2991 2.924421 CTTCTCTTCCACCCCTATTGC 58.076 52.381 0.00 0.00 0.00 3.56
2885 2992 2.270434 TCTCTTCCACCCCTATTGCT 57.730 50.000 0.00 0.00 0.00 3.91
2886 2993 2.119495 TCTCTTCCACCCCTATTGCTC 58.881 52.381 0.00 0.00 0.00 4.26
2887 2994 0.830648 TCTTCCACCCCTATTGCTCG 59.169 55.000 0.00 0.00 0.00 5.03
2888 2995 0.179045 CTTCCACCCCTATTGCTCGG 60.179 60.000 0.00 0.00 0.00 4.63
2889 2996 1.632018 TTCCACCCCTATTGCTCGGG 61.632 60.000 0.00 0.00 43.05 5.14
2890 2997 2.203209 CACCCCTATTGCTCGGGC 60.203 66.667 0.00 0.00 40.86 6.13
2891 2998 3.861797 ACCCCTATTGCTCGGGCG 61.862 66.667 1.14 0.00 40.86 6.13
2892 2999 3.861797 CCCCTATTGCTCGGGCGT 61.862 66.667 1.14 0.00 42.25 5.68
2893 3000 2.588877 CCCTATTGCTCGGGCGTG 60.589 66.667 1.14 0.00 42.25 5.34
2956 3063 1.071471 CTGTCGCTGGGTCTTGGTT 59.929 57.895 0.00 0.00 0.00 3.67
3012 3119 4.668118 GTTCCCGGTCGCCGTTGA 62.668 66.667 15.38 9.62 46.80 3.18
3029 3136 3.084039 GTTGAATGCTGGATCCACAAGA 58.916 45.455 11.44 0.00 0.00 3.02
3048 3155 2.572556 AGATCCATCATGCTCCTGATCC 59.427 50.000 0.00 0.00 33.59 3.36
3065 3172 2.494918 CGACCCGGTAGCTTCCTG 59.505 66.667 7.87 0.49 0.00 3.86
3066 3173 2.348888 CGACCCGGTAGCTTCCTGT 61.349 63.158 7.87 4.57 0.00 4.00
3067 3174 1.885163 CGACCCGGTAGCTTCCTGTT 61.885 60.000 7.87 0.00 0.00 3.16
3068 3175 0.323957 GACCCGGTAGCTTCCTGTTT 59.676 55.000 7.87 0.00 0.00 2.83
3069 3176 0.036306 ACCCGGTAGCTTCCTGTTTG 59.964 55.000 7.87 0.00 0.00 2.93
3070 3177 0.323629 CCCGGTAGCTTCCTGTTTGA 59.676 55.000 7.87 0.00 0.00 2.69
3071 3178 1.271163 CCCGGTAGCTTCCTGTTTGAA 60.271 52.381 7.87 0.00 0.00 2.69
3072 3179 2.500229 CCGGTAGCTTCCTGTTTGAAA 58.500 47.619 7.87 0.00 0.00 2.69
3073 3180 3.081804 CCGGTAGCTTCCTGTTTGAAAT 58.918 45.455 7.87 0.00 0.00 2.17
3074 3181 4.258543 CCGGTAGCTTCCTGTTTGAAATA 58.741 43.478 7.87 0.00 0.00 1.40
3075 3182 4.881850 CCGGTAGCTTCCTGTTTGAAATAT 59.118 41.667 7.87 0.00 0.00 1.28
3076 3183 6.053005 CCGGTAGCTTCCTGTTTGAAATATA 58.947 40.000 7.87 0.00 0.00 0.86
3077 3184 6.540914 CCGGTAGCTTCCTGTTTGAAATATAA 59.459 38.462 7.87 0.00 0.00 0.98
3078 3185 7.254795 CCGGTAGCTTCCTGTTTGAAATATAAG 60.255 40.741 7.87 0.00 0.00 1.73
3079 3186 7.418408 GGTAGCTTCCTGTTTGAAATATAAGC 58.582 38.462 1.39 11.36 38.64 3.09
3080 3187 7.067008 GGTAGCTTCCTGTTTGAAATATAAGCA 59.933 37.037 17.55 7.02 40.33 3.91
3081 3188 6.856895 AGCTTCCTGTTTGAAATATAAGCAC 58.143 36.000 17.55 0.00 40.33 4.40
3082 3189 6.434028 AGCTTCCTGTTTGAAATATAAGCACA 59.566 34.615 17.55 0.00 40.33 4.57
3083 3190 7.123247 AGCTTCCTGTTTGAAATATAAGCACAT 59.877 33.333 17.55 2.59 40.33 3.21
3084 3191 7.761249 GCTTCCTGTTTGAAATATAAGCACATT 59.239 33.333 13.26 0.00 38.33 2.71
3085 3192 9.643693 CTTCCTGTTTGAAATATAAGCACATTT 57.356 29.630 0.00 0.00 0.00 2.32
3086 3193 9.995003 TTCCTGTTTGAAATATAAGCACATTTT 57.005 25.926 0.00 0.00 0.00 1.82
3087 3194 9.995003 TCCTGTTTGAAATATAAGCACATTTTT 57.005 25.926 0.00 0.00 0.00 1.94
3118 3225 8.725405 TTTAATCCACGAGTAAATGATAAGCA 57.275 30.769 0.00 0.00 29.22 3.91
3119 3226 8.902540 TTAATCCACGAGTAAATGATAAGCAT 57.097 30.769 0.00 0.00 39.43 3.79
3120 3227 6.791887 ATCCACGAGTAAATGATAAGCATG 57.208 37.500 0.00 0.00 37.28 4.06
3121 3228 5.056480 TCCACGAGTAAATGATAAGCATGG 58.944 41.667 0.00 0.00 37.28 3.66
3122 3229 4.319766 CCACGAGTAAATGATAAGCATGGC 60.320 45.833 0.00 0.00 37.28 4.40
3123 3230 4.273235 CACGAGTAAATGATAAGCATGGCA 59.727 41.667 0.00 0.00 37.28 4.92
3124 3231 4.881273 ACGAGTAAATGATAAGCATGGCAA 59.119 37.500 0.00 0.00 37.28 4.52
3125 3232 5.356751 ACGAGTAAATGATAAGCATGGCAAA 59.643 36.000 0.00 0.00 37.28 3.68
3126 3233 6.039717 ACGAGTAAATGATAAGCATGGCAAAT 59.960 34.615 0.00 0.00 37.28 2.32
3127 3234 7.228507 ACGAGTAAATGATAAGCATGGCAAATA 59.771 33.333 0.00 0.00 37.28 1.40
3128 3235 7.535258 CGAGTAAATGATAAGCATGGCAAATAC 59.465 37.037 0.00 0.00 37.28 1.89
3129 3236 8.236585 AGTAAATGATAAGCATGGCAAATACA 57.763 30.769 0.00 0.00 37.28 2.29
3130 3237 8.355169 AGTAAATGATAAGCATGGCAAATACAG 58.645 33.333 0.00 0.00 37.28 2.74
3131 3238 6.720112 AATGATAAGCATGGCAAATACAGT 57.280 33.333 0.00 0.00 37.28 3.55
3132 3239 7.822161 AATGATAAGCATGGCAAATACAGTA 57.178 32.000 0.00 0.00 37.28 2.74
3133 3240 8.413309 AATGATAAGCATGGCAAATACAGTAT 57.587 30.769 0.00 0.00 37.28 2.12
3134 3241 7.205737 TGATAAGCATGGCAAATACAGTATG 57.794 36.000 0.00 0.00 46.00 2.39
3135 3242 6.997476 TGATAAGCATGGCAAATACAGTATGA 59.003 34.615 0.00 0.00 39.69 2.15
3136 3243 7.666804 TGATAAGCATGGCAAATACAGTATGAT 59.333 33.333 0.00 0.00 39.69 2.45
3137 3244 5.954296 AGCATGGCAAATACAGTATGATC 57.046 39.130 0.00 0.00 39.69 2.92
3138 3245 5.628130 AGCATGGCAAATACAGTATGATCT 58.372 37.500 0.00 0.00 39.69 2.75
3139 3246 5.704515 AGCATGGCAAATACAGTATGATCTC 59.295 40.000 0.00 0.00 39.69 2.75
3140 3247 5.471116 GCATGGCAAATACAGTATGATCTCA 59.529 40.000 0.00 0.00 39.69 3.27
3141 3248 6.150641 GCATGGCAAATACAGTATGATCTCAT 59.849 38.462 0.00 0.00 39.69 2.90
3142 3249 7.335171 GCATGGCAAATACAGTATGATCTCATA 59.665 37.037 0.00 0.00 39.69 2.15
3155 3262 5.899120 TGATCTCATACCGATACCTAAGC 57.101 43.478 0.00 0.00 0.00 3.09
3156 3263 5.321927 TGATCTCATACCGATACCTAAGCA 58.678 41.667 0.00 0.00 0.00 3.91
3157 3264 5.952347 TGATCTCATACCGATACCTAAGCAT 59.048 40.000 0.00 0.00 0.00 3.79
3158 3265 5.644977 TCTCATACCGATACCTAAGCATG 57.355 43.478 0.00 0.00 0.00 4.06
3159 3266 5.077564 TCTCATACCGATACCTAAGCATGT 58.922 41.667 0.00 0.00 0.00 3.21
3160 3267 5.048013 TCTCATACCGATACCTAAGCATGTG 60.048 44.000 0.00 0.00 0.00 3.21
3161 3268 4.830600 TCATACCGATACCTAAGCATGTGA 59.169 41.667 0.00 0.00 0.00 3.58
3162 3269 3.735237 ACCGATACCTAAGCATGTGAG 57.265 47.619 0.00 0.00 0.00 3.51
3163 3270 3.031736 ACCGATACCTAAGCATGTGAGT 58.968 45.455 0.00 0.00 0.00 3.41
3164 3271 4.212716 ACCGATACCTAAGCATGTGAGTA 58.787 43.478 0.00 0.00 0.00 2.59
3165 3272 4.037684 ACCGATACCTAAGCATGTGAGTAC 59.962 45.833 0.00 0.00 0.00 2.73
3166 3273 4.219802 CGATACCTAAGCATGTGAGTACG 58.780 47.826 0.00 0.00 0.00 3.67
3167 3274 4.261072 CGATACCTAAGCATGTGAGTACGT 60.261 45.833 0.00 0.00 0.00 3.57
3168 3275 5.049886 CGATACCTAAGCATGTGAGTACGTA 60.050 44.000 0.00 0.00 0.00 3.57
3169 3276 4.367386 ACCTAAGCATGTGAGTACGTAC 57.633 45.455 18.10 18.10 0.00 3.67
3170 3277 3.760151 ACCTAAGCATGTGAGTACGTACA 59.240 43.478 26.55 9.98 0.00 2.90
3171 3278 4.142447 ACCTAAGCATGTGAGTACGTACAG 60.142 45.833 26.55 11.20 0.00 2.74
3172 3279 3.936372 AAGCATGTGAGTACGTACAGT 57.064 42.857 26.55 7.86 0.00 3.55
3173 3280 5.065602 CCTAAGCATGTGAGTACGTACAGTA 59.934 44.000 26.55 10.11 0.00 2.74
3186 3293 5.627499 ACGTACAGTACATAGAACCGAAA 57.373 39.130 11.37 0.00 0.00 3.46
3187 3294 5.393962 ACGTACAGTACATAGAACCGAAAC 58.606 41.667 11.37 0.00 0.00 2.78
3188 3295 5.048782 ACGTACAGTACATAGAACCGAAACA 60.049 40.000 11.37 0.00 0.00 2.83
3189 3296 6.032094 CGTACAGTACATAGAACCGAAACAT 58.968 40.000 11.37 0.00 0.00 2.71
3190 3297 6.195983 CGTACAGTACATAGAACCGAAACATC 59.804 42.308 11.37 0.00 0.00 3.06
3191 3298 6.282199 ACAGTACATAGAACCGAAACATCT 57.718 37.500 0.00 0.00 0.00 2.90
3192 3299 6.331061 ACAGTACATAGAACCGAAACATCTC 58.669 40.000 0.00 0.00 0.00 2.75
3193 3300 5.749109 CAGTACATAGAACCGAAACATCTCC 59.251 44.000 0.00 0.00 0.00 3.71
3194 3301 3.782046 ACATAGAACCGAAACATCTCCG 58.218 45.455 0.00 0.00 0.00 4.63
3195 3302 3.194968 ACATAGAACCGAAACATCTCCGT 59.805 43.478 0.00 0.00 0.00 4.69
3196 3303 2.365408 AGAACCGAAACATCTCCGTC 57.635 50.000 0.00 0.00 0.00 4.79
3197 3304 1.067071 AGAACCGAAACATCTCCGTCC 60.067 52.381 0.00 0.00 0.00 4.79
3198 3305 0.682852 AACCGAAACATCTCCGTCCA 59.317 50.000 0.00 0.00 0.00 4.02
3199 3306 0.902531 ACCGAAACATCTCCGTCCAT 59.097 50.000 0.00 0.00 0.00 3.41
3200 3307 1.134788 ACCGAAACATCTCCGTCCATC 60.135 52.381 0.00 0.00 0.00 3.51
3201 3308 1.137086 CCGAAACATCTCCGTCCATCT 59.863 52.381 0.00 0.00 0.00 2.90
3202 3309 2.464865 CGAAACATCTCCGTCCATCTC 58.535 52.381 0.00 0.00 0.00 2.75
3203 3310 2.099921 CGAAACATCTCCGTCCATCTCT 59.900 50.000 0.00 0.00 0.00 3.10
3204 3311 3.429547 CGAAACATCTCCGTCCATCTCTT 60.430 47.826 0.00 0.00 0.00 2.85
3205 3312 4.508662 GAAACATCTCCGTCCATCTCTTT 58.491 43.478 0.00 0.00 0.00 2.52
3206 3313 4.559862 AACATCTCCGTCCATCTCTTTT 57.440 40.909 0.00 0.00 0.00 2.27
3207 3314 3.866651 ACATCTCCGTCCATCTCTTTTG 58.133 45.455 0.00 0.00 0.00 2.44
3208 3315 3.201290 CATCTCCGTCCATCTCTTTTGG 58.799 50.000 0.00 0.00 35.45 3.28
3209 3316 2.536066 TCTCCGTCCATCTCTTTTGGA 58.464 47.619 0.00 0.00 40.96 3.53
3210 3317 2.903784 TCTCCGTCCATCTCTTTTGGAA 59.096 45.455 0.00 0.00 44.62 3.53
3211 3318 3.003480 CTCCGTCCATCTCTTTTGGAAC 58.997 50.000 0.00 0.00 44.62 3.62
3212 3319 2.637872 TCCGTCCATCTCTTTTGGAACT 59.362 45.455 0.00 0.00 44.62 3.01
3213 3320 2.744202 CCGTCCATCTCTTTTGGAACTG 59.256 50.000 0.00 0.00 44.62 3.16
3214 3321 2.160417 CGTCCATCTCTTTTGGAACTGC 59.840 50.000 0.00 0.00 44.62 4.40
3215 3322 2.489722 GTCCATCTCTTTTGGAACTGCC 59.510 50.000 0.00 0.00 44.62 4.85
3216 3323 4.061627 GTCCATCTCTTTTGGAACTGCCA 61.062 47.826 0.00 0.00 44.62 4.92
3223 3330 4.311700 TGGAACTGCCACCTCTCA 57.688 55.556 0.00 0.00 43.33 3.27
3224 3331 1.754745 TGGAACTGCCACCTCTCAC 59.245 57.895 0.00 0.00 43.33 3.51
3225 3332 1.374758 GGAACTGCCACCTCTCACG 60.375 63.158 0.00 0.00 36.34 4.35
3226 3333 1.666011 GAACTGCCACCTCTCACGA 59.334 57.895 0.00 0.00 0.00 4.35
3227 3334 0.389166 GAACTGCCACCTCTCACGAG 60.389 60.000 0.00 0.00 37.01 4.18
3228 3335 2.125753 CTGCCACCTCTCACGAGC 60.126 66.667 0.00 0.00 35.90 5.03
3229 3336 2.917227 TGCCACCTCTCACGAGCA 60.917 61.111 0.00 0.00 35.90 4.26
3230 3337 2.343758 GCCACCTCTCACGAGCAA 59.656 61.111 0.00 0.00 35.90 3.91
3231 3338 1.078848 GCCACCTCTCACGAGCAAT 60.079 57.895 0.00 0.00 35.90 3.56
3232 3339 0.674895 GCCACCTCTCACGAGCAATT 60.675 55.000 0.00 0.00 35.90 2.32
3233 3340 1.813513 CCACCTCTCACGAGCAATTT 58.186 50.000 0.00 0.00 35.90 1.82
3234 3341 1.466167 CCACCTCTCACGAGCAATTTG 59.534 52.381 0.00 0.00 35.90 2.32
3235 3342 1.466167 CACCTCTCACGAGCAATTTGG 59.534 52.381 0.00 0.00 35.90 3.28
3236 3343 1.347707 ACCTCTCACGAGCAATTTGGA 59.652 47.619 0.00 0.00 35.90 3.53
3237 3344 1.734465 CCTCTCACGAGCAATTTGGAC 59.266 52.381 0.00 0.00 35.90 4.02
3238 3345 2.416747 CTCTCACGAGCAATTTGGACA 58.583 47.619 0.00 0.00 0.00 4.02
3239 3346 2.414481 CTCTCACGAGCAATTTGGACAG 59.586 50.000 0.00 0.00 0.00 3.51
3240 3347 2.037121 TCTCACGAGCAATTTGGACAGA 59.963 45.455 0.00 0.00 0.00 3.41
3241 3348 2.414481 CTCACGAGCAATTTGGACAGAG 59.586 50.000 0.00 0.00 0.00 3.35
3242 3349 1.466167 CACGAGCAATTTGGACAGAGG 59.534 52.381 0.00 0.00 0.00 3.69
3243 3350 1.072331 ACGAGCAATTTGGACAGAGGT 59.928 47.619 0.00 0.00 0.00 3.85
3244 3351 1.466167 CGAGCAATTTGGACAGAGGTG 59.534 52.381 0.00 0.00 0.00 4.00
3245 3352 1.815003 GAGCAATTTGGACAGAGGTGG 59.185 52.381 0.00 0.00 0.00 4.61
3246 3353 0.244721 GCAATTTGGACAGAGGTGGC 59.755 55.000 0.00 0.00 0.00 5.01
3247 3354 1.915141 CAATTTGGACAGAGGTGGCT 58.085 50.000 0.00 0.00 0.00 4.75
3248 3355 2.879756 GCAATTTGGACAGAGGTGGCTA 60.880 50.000 0.00 0.00 0.00 3.93
3249 3356 3.420893 CAATTTGGACAGAGGTGGCTAA 58.579 45.455 0.00 0.00 28.27 3.09
3250 3357 2.859165 TTTGGACAGAGGTGGCTAAG 57.141 50.000 0.00 0.00 32.93 2.18
3251 3358 1.729586 TTGGACAGAGGTGGCTAAGT 58.270 50.000 0.00 0.00 26.95 2.24
3252 3359 0.976641 TGGACAGAGGTGGCTAAGTG 59.023 55.000 0.00 0.00 0.00 3.16
3253 3360 0.250513 GGACAGAGGTGGCTAAGTGG 59.749 60.000 0.00 0.00 0.00 4.00
3254 3361 1.267121 GACAGAGGTGGCTAAGTGGA 58.733 55.000 0.00 0.00 0.00 4.02
3255 3362 1.623811 GACAGAGGTGGCTAAGTGGAA 59.376 52.381 0.00 0.00 0.00 3.53
3256 3363 2.237392 GACAGAGGTGGCTAAGTGGAAT 59.763 50.000 0.00 0.00 0.00 3.01
3257 3364 2.026822 ACAGAGGTGGCTAAGTGGAATG 60.027 50.000 0.00 0.00 0.00 2.67
3258 3365 1.561542 AGAGGTGGCTAAGTGGAATGG 59.438 52.381 0.00 0.00 0.00 3.16
3259 3366 1.559682 GAGGTGGCTAAGTGGAATGGA 59.440 52.381 0.00 0.00 0.00 3.41
3260 3367 1.561542 AGGTGGCTAAGTGGAATGGAG 59.438 52.381 0.00 0.00 0.00 3.86
3261 3368 1.408822 GGTGGCTAAGTGGAATGGAGG 60.409 57.143 0.00 0.00 0.00 4.30
3262 3369 0.255890 TGGCTAAGTGGAATGGAGGC 59.744 55.000 0.00 0.00 0.00 4.70
3263 3370 0.548510 GGCTAAGTGGAATGGAGGCT 59.451 55.000 0.00 0.00 0.00 4.58
3264 3371 1.475930 GGCTAAGTGGAATGGAGGCTC 60.476 57.143 5.78 5.78 0.00 4.70
3265 3372 1.808133 GCTAAGTGGAATGGAGGCTCG 60.808 57.143 8.69 0.00 0.00 5.03
3266 3373 0.830648 TAAGTGGAATGGAGGCTCGG 59.169 55.000 8.69 0.00 0.00 4.63
3267 3374 2.514824 GTGGAATGGAGGCTCGGC 60.515 66.667 8.69 0.00 0.00 5.54
3268 3375 2.688666 TGGAATGGAGGCTCGGCT 60.689 61.111 8.69 0.00 0.00 5.52
3269 3376 2.110006 GGAATGGAGGCTCGGCTC 59.890 66.667 8.69 11.63 0.00 4.70
3270 3377 2.439104 GGAATGGAGGCTCGGCTCT 61.439 63.158 18.24 0.86 0.00 4.09
3271 3378 1.115930 GGAATGGAGGCTCGGCTCTA 61.116 60.000 18.24 13.81 0.00 2.43
3272 3379 0.316841 GAATGGAGGCTCGGCTCTAG 59.683 60.000 18.24 0.00 0.00 2.43
3273 3380 1.753368 AATGGAGGCTCGGCTCTAGC 61.753 60.000 18.24 4.71 39.33 3.42
3274 3381 2.835431 GGAGGCTCGGCTCTAGCA 60.835 66.667 18.24 0.00 44.36 3.49
3275 3382 2.206536 GGAGGCTCGGCTCTAGCAT 61.207 63.158 18.24 0.84 44.36 3.79
3276 3383 1.745264 GAGGCTCGGCTCTAGCATT 59.255 57.895 12.65 0.00 44.36 3.56
3277 3384 0.962489 GAGGCTCGGCTCTAGCATTA 59.038 55.000 12.65 0.00 44.36 1.90
3278 3385 0.676736 AGGCTCGGCTCTAGCATTAC 59.323 55.000 4.07 0.00 44.36 1.89
3279 3386 0.319986 GGCTCGGCTCTAGCATTACC 60.320 60.000 4.07 0.00 44.36 2.85
3280 3387 0.389391 GCTCGGCTCTAGCATTACCA 59.611 55.000 4.07 0.00 44.36 3.25
3281 3388 1.202533 GCTCGGCTCTAGCATTACCAA 60.203 52.381 4.07 0.00 44.36 3.67
3282 3389 2.748605 CTCGGCTCTAGCATTACCAAG 58.251 52.381 4.07 0.00 44.36 3.61
3283 3390 2.101582 CTCGGCTCTAGCATTACCAAGT 59.898 50.000 4.07 0.00 44.36 3.16
3284 3391 2.159099 TCGGCTCTAGCATTACCAAGTG 60.159 50.000 4.07 0.00 44.36 3.16
3285 3392 2.159099 CGGCTCTAGCATTACCAAGTGA 60.159 50.000 4.07 0.00 44.36 3.41
3286 3393 3.678806 CGGCTCTAGCATTACCAAGTGAA 60.679 47.826 4.07 0.00 44.36 3.18
3287 3394 3.873952 GGCTCTAGCATTACCAAGTGAAG 59.126 47.826 4.07 0.00 44.36 3.02
3288 3395 4.383118 GGCTCTAGCATTACCAAGTGAAGA 60.383 45.833 4.07 0.00 44.36 2.87
3289 3396 4.808364 GCTCTAGCATTACCAAGTGAAGAG 59.192 45.833 0.00 0.00 41.59 2.85
3290 3397 4.759782 TCTAGCATTACCAAGTGAAGAGC 58.240 43.478 0.00 0.00 0.00 4.09
3291 3398 3.423539 AGCATTACCAAGTGAAGAGCA 57.576 42.857 0.00 0.00 0.00 4.26
3292 3399 3.341823 AGCATTACCAAGTGAAGAGCAG 58.658 45.455 0.00 0.00 0.00 4.24
3293 3400 2.159462 GCATTACCAAGTGAAGAGCAGC 60.159 50.000 0.00 0.00 0.00 5.25
3294 3401 3.341823 CATTACCAAGTGAAGAGCAGCT 58.658 45.455 0.00 0.00 0.00 4.24
3295 3402 2.751166 TACCAAGTGAAGAGCAGCTC 57.249 50.000 15.25 15.25 0.00 4.09
3296 3403 0.761187 ACCAAGTGAAGAGCAGCTCA 59.239 50.000 24.64 1.51 32.06 4.26
3297 3404 1.141657 ACCAAGTGAAGAGCAGCTCAA 59.858 47.619 24.64 6.77 32.06 3.02
3298 3405 1.534595 CCAAGTGAAGAGCAGCTCAAC 59.465 52.381 24.64 17.88 32.06 3.18
3299 3406 2.216046 CAAGTGAAGAGCAGCTCAACA 58.784 47.619 24.64 19.07 32.06 3.33
3300 3407 1.876322 AGTGAAGAGCAGCTCAACAC 58.124 50.000 28.95 28.95 38.23 3.32
3301 3408 0.510359 GTGAAGAGCAGCTCAACACG 59.490 55.000 24.64 0.00 32.86 4.49
3302 3409 0.389025 TGAAGAGCAGCTCAACACGA 59.611 50.000 24.64 0.00 32.06 4.35
3303 3410 0.787183 GAAGAGCAGCTCAACACGAC 59.213 55.000 24.64 3.86 32.06 4.34
3304 3411 0.601311 AAGAGCAGCTCAACACGACC 60.601 55.000 24.64 0.00 32.06 4.79
3305 3412 1.005630 GAGCAGCTCAACACGACCT 60.006 57.895 18.17 0.00 0.00 3.85
3306 3413 1.005630 AGCAGCTCAACACGACCTC 60.006 57.895 0.00 0.00 0.00 3.85
3307 3414 2.029844 GCAGCTCAACACGACCTCC 61.030 63.158 0.00 0.00 0.00 4.30
3308 3415 1.367471 CAGCTCAACACGACCTCCA 59.633 57.895 0.00 0.00 0.00 3.86
3309 3416 0.946221 CAGCTCAACACGACCTCCAC 60.946 60.000 0.00 0.00 0.00 4.02
3310 3417 2.022129 GCTCAACACGACCTCCACG 61.022 63.158 0.00 0.00 0.00 4.94
3311 3418 1.372997 CTCAACACGACCTCCACGG 60.373 63.158 0.00 0.00 39.35 4.94
3319 3426 3.236391 ACCTCCACGGTCAAAGCA 58.764 55.556 0.00 0.00 44.93 3.91
3320 3427 1.071471 ACCTCCACGGTCAAAGCAG 59.929 57.895 0.00 0.00 44.93 4.24
3321 3428 1.071471 CCTCCACGGTCAAAGCAGT 59.929 57.895 0.00 0.00 0.00 4.40
3322 3429 1.230635 CCTCCACGGTCAAAGCAGTG 61.231 60.000 0.00 0.00 0.00 3.66
3323 3430 0.249868 CTCCACGGTCAAAGCAGTGA 60.250 55.000 0.00 0.00 36.79 3.41
3324 3431 0.396435 TCCACGGTCAAAGCAGTGAT 59.604 50.000 0.00 0.00 36.79 3.06
3325 3432 0.798776 CCACGGTCAAAGCAGTGATC 59.201 55.000 0.00 0.00 36.79 2.92
3327 3434 1.421485 CGGTCAAAGCAGTGATCGC 59.579 57.895 9.05 0.00 44.44 4.58
3328 3435 1.421485 GGTCAAAGCAGTGATCGCG 59.579 57.895 0.00 0.00 0.00 5.87
3329 3436 1.225854 GTCAAAGCAGTGATCGCGC 60.226 57.895 0.00 13.00 0.00 6.86
3330 3437 2.276244 CAAAGCAGTGATCGCGCG 60.276 61.111 26.76 26.76 0.00 6.86
3331 3438 4.152625 AAAGCAGTGATCGCGCGC 62.153 61.111 27.95 23.91 0.00 6.86
3355 3462 3.547567 CAGAGAGTGCAGAAAGGGG 57.452 57.895 0.00 0.00 0.00 4.79
3356 3463 0.035630 CAGAGAGTGCAGAAAGGGGG 60.036 60.000 0.00 0.00 0.00 5.40
3357 3464 0.474660 AGAGAGTGCAGAAAGGGGGT 60.475 55.000 0.00 0.00 0.00 4.95
3358 3465 1.203313 AGAGAGTGCAGAAAGGGGGTA 60.203 52.381 0.00 0.00 0.00 3.69
3359 3466 0.984995 AGAGTGCAGAAAGGGGGTAC 59.015 55.000 0.00 0.00 0.00 3.34
3381 3488 2.715749 TGATCATGGCCACTGTTAGG 57.284 50.000 8.16 0.00 0.00 2.69
3382 3489 1.212688 TGATCATGGCCACTGTTAGGG 59.787 52.381 8.16 0.00 0.00 3.53
3383 3490 1.490490 GATCATGGCCACTGTTAGGGA 59.510 52.381 8.16 0.00 0.00 4.20
3384 3491 1.367346 TCATGGCCACTGTTAGGGAA 58.633 50.000 8.16 0.00 0.00 3.97
3385 3492 1.922447 TCATGGCCACTGTTAGGGAAT 59.078 47.619 8.16 0.00 0.00 3.01
3386 3493 2.311542 TCATGGCCACTGTTAGGGAATT 59.688 45.455 8.16 0.00 0.00 2.17
3387 3494 3.525609 TCATGGCCACTGTTAGGGAATTA 59.474 43.478 8.16 0.00 0.00 1.40
3388 3495 4.167892 TCATGGCCACTGTTAGGGAATTAT 59.832 41.667 8.16 0.00 0.00 1.28
3389 3496 3.897239 TGGCCACTGTTAGGGAATTATG 58.103 45.455 0.00 0.00 0.00 1.90
3390 3497 2.623416 GGCCACTGTTAGGGAATTATGC 59.377 50.000 0.00 0.00 0.00 3.14
3391 3498 3.287222 GCCACTGTTAGGGAATTATGCA 58.713 45.455 0.00 0.00 0.00 3.96
3392 3499 3.699038 GCCACTGTTAGGGAATTATGCAA 59.301 43.478 0.00 0.00 0.00 4.08
3393 3500 4.440112 GCCACTGTTAGGGAATTATGCAAC 60.440 45.833 0.00 0.00 0.00 4.17
3394 3501 4.949856 CCACTGTTAGGGAATTATGCAACT 59.050 41.667 0.00 0.00 0.00 3.16
3395 3502 5.418840 CCACTGTTAGGGAATTATGCAACTT 59.581 40.000 0.00 0.00 0.00 2.66
3396 3503 6.324819 CACTGTTAGGGAATTATGCAACTTG 58.675 40.000 0.00 0.00 0.00 3.16
3397 3504 6.150976 CACTGTTAGGGAATTATGCAACTTGA 59.849 38.462 0.00 0.00 0.00 3.02
3398 3505 6.891908 ACTGTTAGGGAATTATGCAACTTGAT 59.108 34.615 0.00 0.00 0.00 2.57
3399 3506 8.052748 ACTGTTAGGGAATTATGCAACTTGATA 58.947 33.333 0.00 0.00 0.00 2.15
3400 3507 8.995027 TGTTAGGGAATTATGCAACTTGATAT 57.005 30.769 0.00 0.00 0.00 1.63
3401 3508 9.420118 TGTTAGGGAATTATGCAACTTGATATT 57.580 29.630 0.00 0.00 0.00 1.28
3411 3518 7.693969 ATGCAACTTGATATTATTAGGAGGC 57.306 36.000 0.00 0.00 0.00 4.70
3412 3519 6.003950 TGCAACTTGATATTATTAGGAGGCC 58.996 40.000 0.00 0.00 0.00 5.19
3413 3520 6.003950 GCAACTTGATATTATTAGGAGGCCA 58.996 40.000 5.01 0.00 0.00 5.36
3414 3521 6.490040 GCAACTTGATATTATTAGGAGGCCAA 59.510 38.462 5.01 0.00 0.00 4.52
3415 3522 7.014230 GCAACTTGATATTATTAGGAGGCCAAA 59.986 37.037 5.01 0.00 0.00 3.28
3416 3523 8.571336 CAACTTGATATTATTAGGAGGCCAAAG 58.429 37.037 5.01 0.00 0.00 2.77
3417 3524 6.717084 ACTTGATATTATTAGGAGGCCAAAGC 59.283 38.462 5.01 0.00 38.76 3.51
3433 3540 6.764308 GCCAAAGCCATCATATATACATGT 57.236 37.500 2.69 2.69 0.00 3.21
3434 3541 7.864108 GCCAAAGCCATCATATATACATGTA 57.136 36.000 8.27 8.27 0.00 2.29
3435 3542 7.697691 GCCAAAGCCATCATATATACATGTAC 58.302 38.462 7.96 0.00 0.00 2.90
3436 3543 7.336679 GCCAAAGCCATCATATATACATGTACA 59.663 37.037 7.96 0.00 0.00 2.90
3437 3544 9.230122 CCAAAGCCATCATATATACATGTACAA 57.770 33.333 7.96 0.00 0.00 2.41
3440 3547 9.881649 AAGCCATCATATATACATGTACAAGAG 57.118 33.333 7.96 0.00 0.00 2.85
3441 3548 9.259832 AGCCATCATATATACATGTACAAGAGA 57.740 33.333 7.96 4.78 0.00 3.10
3442 3549 9.875691 GCCATCATATATACATGTACAAGAGAA 57.124 33.333 7.96 0.00 0.00 2.87
3446 3553 9.875691 TCATATATACATGTACAAGAGAATGCC 57.124 33.333 7.96 0.00 0.00 4.40
3447 3554 9.657419 CATATATACATGTACAAGAGAATGCCA 57.343 33.333 7.96 0.00 0.00 4.92
3449 3556 6.932356 ATACATGTACAAGAGAATGCCAAG 57.068 37.500 7.96 0.00 0.00 3.61
3450 3557 4.910195 ACATGTACAAGAGAATGCCAAGA 58.090 39.130 4.87 0.00 0.00 3.02
3451 3558 4.940046 ACATGTACAAGAGAATGCCAAGAG 59.060 41.667 4.87 0.00 0.00 2.85
3452 3559 4.890158 TGTACAAGAGAATGCCAAGAGA 57.110 40.909 0.00 0.00 0.00 3.10
3453 3560 4.569943 TGTACAAGAGAATGCCAAGAGAC 58.430 43.478 0.00 0.00 0.00 3.36
3454 3561 4.284490 TGTACAAGAGAATGCCAAGAGACT 59.716 41.667 0.00 0.00 0.00 3.24
3455 3562 5.480422 TGTACAAGAGAATGCCAAGAGACTA 59.520 40.000 0.00 0.00 0.00 2.59
3456 3563 5.083533 ACAAGAGAATGCCAAGAGACTAG 57.916 43.478 0.00 0.00 0.00 2.57
3457 3564 4.774726 ACAAGAGAATGCCAAGAGACTAGA 59.225 41.667 0.00 0.00 0.00 2.43
3458 3565 5.247110 ACAAGAGAATGCCAAGAGACTAGAA 59.753 40.000 0.00 0.00 0.00 2.10
3459 3566 6.070309 ACAAGAGAATGCCAAGAGACTAGAAT 60.070 38.462 0.00 0.00 0.00 2.40
3460 3567 7.124901 ACAAGAGAATGCCAAGAGACTAGAATA 59.875 37.037 0.00 0.00 0.00 1.75
3461 3568 7.049799 AGAGAATGCCAAGAGACTAGAATAC 57.950 40.000 0.00 0.00 0.00 1.89
3462 3569 6.609212 AGAGAATGCCAAGAGACTAGAATACA 59.391 38.462 0.00 0.00 0.00 2.29
3463 3570 7.124901 AGAGAATGCCAAGAGACTAGAATACAA 59.875 37.037 0.00 0.00 0.00 2.41
3464 3571 7.624549 AGAATGCCAAGAGACTAGAATACAAA 58.375 34.615 0.00 0.00 0.00 2.83
3465 3572 8.103305 AGAATGCCAAGAGACTAGAATACAAAA 58.897 33.333 0.00 0.00 0.00 2.44
3466 3573 7.856145 ATGCCAAGAGACTAGAATACAAAAG 57.144 36.000 0.00 0.00 0.00 2.27
3467 3574 6.173339 TGCCAAGAGACTAGAATACAAAAGG 58.827 40.000 0.00 0.00 0.00 3.11
3468 3575 5.065346 GCCAAGAGACTAGAATACAAAAGGC 59.935 44.000 0.00 0.00 0.00 4.35
3469 3576 5.586643 CCAAGAGACTAGAATACAAAAGGCC 59.413 44.000 0.00 0.00 0.00 5.19
3470 3577 6.173339 CAAGAGACTAGAATACAAAAGGCCA 58.827 40.000 5.01 0.00 0.00 5.36
3471 3578 6.374417 AGAGACTAGAATACAAAAGGCCAA 57.626 37.500 5.01 0.00 0.00 4.52
3472 3579 6.779860 AGAGACTAGAATACAAAAGGCCAAA 58.220 36.000 5.01 0.00 0.00 3.28
3473 3580 6.881602 AGAGACTAGAATACAAAAGGCCAAAG 59.118 38.462 5.01 0.00 0.00 2.77
3474 3581 5.946377 AGACTAGAATACAAAAGGCCAAAGG 59.054 40.000 5.01 0.00 0.00 3.11
3484 3591 4.440145 GCCAAAGGCCATCCTCAA 57.560 55.556 5.01 0.00 43.40 3.02
3485 3592 2.906268 GCCAAAGGCCATCCTCAAT 58.094 52.632 5.01 0.00 43.40 2.57
3486 3593 2.071778 GCCAAAGGCCATCCTCAATA 57.928 50.000 5.01 0.00 43.40 1.90
3487 3594 2.601905 GCCAAAGGCCATCCTCAATAT 58.398 47.619 5.01 0.00 43.40 1.28
3488 3595 3.766545 GCCAAAGGCCATCCTCAATATA 58.233 45.455 5.01 0.00 43.40 0.86
3489 3596 4.151883 GCCAAAGGCCATCCTCAATATAA 58.848 43.478 5.01 0.00 43.40 0.98
3490 3597 4.021981 GCCAAAGGCCATCCTCAATATAAC 60.022 45.833 5.01 0.00 43.40 1.89
3491 3598 5.388654 CCAAAGGCCATCCTCAATATAACT 58.611 41.667 5.01 0.00 43.40 2.24
3492 3599 5.474876 CCAAAGGCCATCCTCAATATAACTC 59.525 44.000 5.01 0.00 43.40 3.01
3493 3600 6.302269 CAAAGGCCATCCTCAATATAACTCT 58.698 40.000 5.01 0.00 43.40 3.24
3494 3601 7.453393 CAAAGGCCATCCTCAATATAACTCTA 58.547 38.462 5.01 0.00 43.40 2.43
3495 3602 7.633018 AAGGCCATCCTCAATATAACTCTAA 57.367 36.000 5.01 0.00 43.40 2.10
3496 3603 7.010339 AGGCCATCCTCAATATAACTCTAAC 57.990 40.000 5.01 0.00 38.72 2.34
3497 3604 6.558775 AGGCCATCCTCAATATAACTCTAACA 59.441 38.462 5.01 0.00 38.72 2.41
3498 3605 6.651225 GGCCATCCTCAATATAACTCTAACAC 59.349 42.308 0.00 0.00 0.00 3.32
3499 3606 7.217200 GCCATCCTCAATATAACTCTAACACA 58.783 38.462 0.00 0.00 0.00 3.72
3500 3607 7.171678 GCCATCCTCAATATAACTCTAACACAC 59.828 40.741 0.00 0.00 0.00 3.82
3501 3608 7.657761 CCATCCTCAATATAACTCTAACACACC 59.342 40.741 0.00 0.00 0.00 4.16
3502 3609 7.120923 TCCTCAATATAACTCTAACACACCC 57.879 40.000 0.00 0.00 0.00 4.61
3503 3610 6.099269 TCCTCAATATAACTCTAACACACCCC 59.901 42.308 0.00 0.00 0.00 4.95
3504 3611 6.243216 TCAATATAACTCTAACACACCCCC 57.757 41.667 0.00 0.00 0.00 5.40
3524 3631 3.890527 CCCCCTCCTCAAACTCATG 57.109 57.895 0.00 0.00 0.00 3.07
3525 3632 0.257039 CCCCCTCCTCAAACTCATGG 59.743 60.000 0.00 0.00 0.00 3.66
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
29 30 4.803908 CTCCCTCCCCTTTGCGGC 62.804 72.222 0.00 0.00 0.00 6.53
79 80 1.832608 CCATCGTCTCCCCATCCGA 60.833 63.158 0.00 0.00 0.00 4.55
98 99 2.486716 CTCCTCCCCAGATCTTTTCCT 58.513 52.381 0.00 0.00 0.00 3.36
103 104 0.693767 CTGCCTCCTCCCCAGATCTT 60.694 60.000 0.00 0.00 0.00 2.40
111 112 2.677848 GGTTTCCTGCCTCCTCCC 59.322 66.667 0.00 0.00 0.00 4.30
272 286 0.467290 TTGGCTCTGGCGTCCTTTTT 60.467 50.000 0.00 0.00 39.81 1.94
440 454 3.553437 CTCCGGTGCGTTCTCGTGT 62.553 63.158 0.00 0.00 39.49 4.49
450 464 2.811317 CTTCGTGCTCTCCGGTGC 60.811 66.667 0.00 5.58 0.00 5.01
503 517 3.241530 TGCTTCGTGCTGGTCCCT 61.242 61.111 5.00 0.00 43.37 4.20
553 567 2.266055 CCTTCCGTGGAGGCAGAC 59.734 66.667 0.00 0.00 35.06 3.51
742 757 3.119709 CTCCTCGCTCTGTCCTCGC 62.120 68.421 0.00 0.00 0.00 5.03
743 758 2.477176 CCTCCTCGCTCTGTCCTCG 61.477 68.421 0.00 0.00 0.00 4.63
920 952 0.663153 GTGAGGCGTTTGAAGCACTT 59.337 50.000 0.00 0.00 36.08 3.16
921 953 0.463654 TGTGAGGCGTTTGAAGCACT 60.464 50.000 0.00 0.00 36.08 4.40
922 954 0.380378 TTGTGAGGCGTTTGAAGCAC 59.620 50.000 0.00 0.00 36.08 4.40
923 955 0.662619 CTTGTGAGGCGTTTGAAGCA 59.337 50.000 0.00 0.00 36.08 3.91
924 956 0.944386 TCTTGTGAGGCGTTTGAAGC 59.056 50.000 0.00 0.00 0.00 3.86
925 957 3.365364 GGAATCTTGTGAGGCGTTTGAAG 60.365 47.826 0.00 0.00 0.00 3.02
926 958 2.552315 GGAATCTTGTGAGGCGTTTGAA 59.448 45.455 0.00 0.00 0.00 2.69
927 959 2.151202 GGAATCTTGTGAGGCGTTTGA 58.849 47.619 0.00 0.00 0.00 2.69
928 960 1.200020 GGGAATCTTGTGAGGCGTTTG 59.800 52.381 0.00 0.00 0.00 2.93
929 961 1.534729 GGGAATCTTGTGAGGCGTTT 58.465 50.000 0.00 0.00 0.00 3.60
930 962 0.322546 GGGGAATCTTGTGAGGCGTT 60.323 55.000 0.00 0.00 0.00 4.84
931 963 1.201429 AGGGGAATCTTGTGAGGCGT 61.201 55.000 0.00 0.00 0.00 5.68
932 964 0.035056 AAGGGGAATCTTGTGAGGCG 60.035 55.000 0.00 0.00 0.00 5.52
933 965 1.283321 AGAAGGGGAATCTTGTGAGGC 59.717 52.381 0.00 0.00 0.00 4.70
934 966 2.092699 GGAGAAGGGGAATCTTGTGAGG 60.093 54.545 0.00 0.00 0.00 3.86
935 967 2.419297 CGGAGAAGGGGAATCTTGTGAG 60.419 54.545 0.00 0.00 0.00 3.51
936 968 1.555075 CGGAGAAGGGGAATCTTGTGA 59.445 52.381 0.00 0.00 0.00 3.58
937 969 1.407437 CCGGAGAAGGGGAATCTTGTG 60.407 57.143 0.00 0.00 0.00 3.33
938 970 0.912486 CCGGAGAAGGGGAATCTTGT 59.088 55.000 0.00 0.00 0.00 3.16
1006 1038 3.154710 CAGTGTAGAGGAGTGTGGTGTA 58.845 50.000 0.00 0.00 0.00 2.90
1497 1532 4.241555 GCCATCTCCACCGCCGAT 62.242 66.667 0.00 0.00 0.00 4.18
1518 1553 1.598685 GGCGACAAGGAACCCGAAA 60.599 57.895 0.00 0.00 0.00 3.46
1584 1619 6.380190 GCCGAATACGTGATTAGAGAAGTAT 58.620 40.000 0.00 0.00 37.88 2.12
1776 1811 3.749064 GCGTCGAGCCAGGAGACA 61.749 66.667 0.00 0.00 40.81 3.41
1855 1890 1.594194 CCGCTGTTGGCCTTATTGCA 61.594 55.000 3.32 0.00 37.74 4.08
2186 2221 1.142748 CCAAGGAGCTAGCGAGGTG 59.857 63.158 9.55 6.80 32.11 4.00
2395 2430 1.154205 CCGTGAGAATGATGCGGACC 61.154 60.000 0.00 0.00 44.57 4.46
2436 2471 1.443194 CAGACAAATGCAGGTGCGC 60.443 57.895 0.00 0.00 45.83 6.09
2437 2472 1.135972 GTACAGACAAATGCAGGTGCG 60.136 52.381 0.00 0.00 45.83 5.34
2438 2473 2.154462 AGTACAGACAAATGCAGGTGC 58.846 47.619 0.00 0.00 42.50 5.01
2439 2474 6.372659 AGAATTAGTACAGACAAATGCAGGTG 59.627 38.462 0.00 0.00 0.00 4.00
2440 2475 6.476378 AGAATTAGTACAGACAAATGCAGGT 58.524 36.000 0.00 0.00 0.00 4.00
2441 2476 6.037610 GGAGAATTAGTACAGACAAATGCAGG 59.962 42.308 0.00 0.00 0.00 4.85
2470 2517 2.158667 CGGGGAAGGCACCAGTTAATAT 60.159 50.000 3.41 0.00 37.48 1.28
2471 2518 1.210967 CGGGGAAGGCACCAGTTAATA 59.789 52.381 3.41 0.00 37.48 0.98
2472 2519 0.034477 CGGGGAAGGCACCAGTTAAT 60.034 55.000 3.41 0.00 37.48 1.40
2473 2520 1.377229 CGGGGAAGGCACCAGTTAA 59.623 57.895 3.41 0.00 37.48 2.01
2524 2582 3.244491 GGCATGCTACATCTGAGATCCTT 60.244 47.826 18.92 0.00 0.00 3.36
2583 2641 1.953559 TGCGCACTCTCTTCACTTTT 58.046 45.000 5.66 0.00 0.00 2.27
2736 2826 0.930310 CAGGTTGTACATCATCCGCG 59.070 55.000 0.00 0.00 39.98 6.46
2770 2860 1.686325 TAGACGGCTGGAATGGCTCC 61.686 60.000 0.00 0.00 45.64 4.70
2841 2948 1.456287 GAGGAGGTGTTGGTTGCCT 59.544 57.895 0.00 0.00 34.93 4.75
2843 2950 1.966451 CGGAGGAGGTGTTGGTTGC 60.966 63.158 0.00 0.00 0.00 4.17
2844 2951 1.966451 GCGGAGGAGGTGTTGGTTG 60.966 63.158 0.00 0.00 0.00 3.77
2845 2952 2.430367 GCGGAGGAGGTGTTGGTT 59.570 61.111 0.00 0.00 0.00 3.67
2850 2957 4.070552 GAAGCGCGGAGGAGGTGT 62.071 66.667 8.83 0.00 0.00 4.16
2851 2958 3.708220 GAGAAGCGCGGAGGAGGTG 62.708 68.421 8.83 0.00 0.00 4.00
2853 2960 2.621371 GAAGAGAAGCGCGGAGGAGG 62.621 65.000 8.83 0.00 0.00 4.30
2856 2963 2.202810 GGAAGAGAAGCGCGGAGG 60.203 66.667 8.83 0.00 0.00 4.30
2857 2964 1.807573 GTGGAAGAGAAGCGCGGAG 60.808 63.158 8.83 0.00 0.00 4.63
2860 2967 2.815647 GGGTGGAAGAGAAGCGCG 60.816 66.667 0.00 0.00 0.00 6.86
2861 2968 1.614241 TAGGGGTGGAAGAGAAGCGC 61.614 60.000 0.00 0.00 0.00 5.92
2862 2969 1.123928 ATAGGGGTGGAAGAGAAGCG 58.876 55.000 0.00 0.00 0.00 4.68
2863 2970 2.924421 CAATAGGGGTGGAAGAGAAGC 58.076 52.381 0.00 0.00 0.00 3.86
2864 2971 2.507471 AGCAATAGGGGTGGAAGAGAAG 59.493 50.000 0.00 0.00 0.00 2.85
2865 2972 2.505819 GAGCAATAGGGGTGGAAGAGAA 59.494 50.000 0.00 0.00 0.00 2.87
2866 2973 2.119495 GAGCAATAGGGGTGGAAGAGA 58.881 52.381 0.00 0.00 0.00 3.10
2867 2974 1.202580 CGAGCAATAGGGGTGGAAGAG 60.203 57.143 0.00 0.00 0.00 2.85
2868 2975 0.830648 CGAGCAATAGGGGTGGAAGA 59.169 55.000 0.00 0.00 0.00 2.87
2869 2976 0.179045 CCGAGCAATAGGGGTGGAAG 60.179 60.000 0.00 0.00 0.00 3.46
2870 2977 1.632018 CCCGAGCAATAGGGGTGGAA 61.632 60.000 0.00 0.00 43.90 3.53
2871 2978 2.070039 CCCGAGCAATAGGGGTGGA 61.070 63.158 0.00 0.00 43.90 4.02
2872 2979 2.510906 CCCGAGCAATAGGGGTGG 59.489 66.667 0.00 0.00 43.90 4.61
2877 2984 3.272334 GCACGCCCGAGCAATAGG 61.272 66.667 5.26 0.00 39.83 2.57
2878 2985 2.202932 AGCACGCCCGAGCAATAG 60.203 61.111 12.22 0.00 39.83 1.73
2879 2986 2.202878 GAGCACGCCCGAGCAATA 60.203 61.111 12.22 0.00 39.83 1.90
2889 2996 3.844090 GAGGGAGAGGGAGCACGC 61.844 72.222 0.00 0.00 0.00 5.34
2890 2997 3.151022 GGAGGGAGAGGGAGCACG 61.151 72.222 0.00 0.00 0.00 5.34
2891 2998 1.383803 ATGGAGGGAGAGGGAGCAC 60.384 63.158 0.00 0.00 0.00 4.40
2892 2999 1.074926 GATGGAGGGAGAGGGAGCA 60.075 63.158 0.00 0.00 0.00 4.26
2893 3000 2.206536 CGATGGAGGGAGAGGGAGC 61.207 68.421 0.00 0.00 0.00 4.70
3029 3136 1.278413 CGGATCAGGAGCATGATGGAT 59.722 52.381 2.01 0.00 40.02 3.41
3048 3155 1.885163 AACAGGAAGCTACCGGGTCG 61.885 60.000 6.32 0.00 34.73 4.79
3092 3199 9.337396 TGCTTATCATTTACTCGTGGATTAAAT 57.663 29.630 0.00 0.00 30.96 1.40
3093 3200 8.725405 TGCTTATCATTTACTCGTGGATTAAA 57.275 30.769 0.00 0.00 0.00 1.52
3094 3201 8.773645 CATGCTTATCATTTACTCGTGGATTAA 58.226 33.333 0.00 0.00 31.79 1.40
3095 3202 7.387673 CCATGCTTATCATTTACTCGTGGATTA 59.612 37.037 0.00 0.00 31.79 1.75
3096 3203 6.205464 CCATGCTTATCATTTACTCGTGGATT 59.795 38.462 0.00 0.00 31.79 3.01
3097 3204 5.702670 CCATGCTTATCATTTACTCGTGGAT 59.297 40.000 0.00 0.00 31.79 3.41
3098 3205 5.056480 CCATGCTTATCATTTACTCGTGGA 58.944 41.667 0.00 0.00 31.79 4.02
3099 3206 4.319766 GCCATGCTTATCATTTACTCGTGG 60.320 45.833 0.00 0.00 31.79 4.94
3100 3207 4.273235 TGCCATGCTTATCATTTACTCGTG 59.727 41.667 0.00 0.00 31.79 4.35
3101 3208 4.450976 TGCCATGCTTATCATTTACTCGT 58.549 39.130 0.00 0.00 31.79 4.18
3102 3209 5.422666 TTGCCATGCTTATCATTTACTCG 57.577 39.130 0.00 0.00 31.79 4.18
3103 3210 8.352201 TGTATTTGCCATGCTTATCATTTACTC 58.648 33.333 0.00 0.00 31.79 2.59
3104 3211 8.236585 TGTATTTGCCATGCTTATCATTTACT 57.763 30.769 0.00 0.00 31.79 2.24
3105 3212 8.137437 ACTGTATTTGCCATGCTTATCATTTAC 58.863 33.333 0.00 0.00 31.79 2.01
3106 3213 8.236585 ACTGTATTTGCCATGCTTATCATTTA 57.763 30.769 0.00 0.00 31.79 1.40
3107 3214 7.116075 ACTGTATTTGCCATGCTTATCATTT 57.884 32.000 0.00 0.00 31.79 2.32
3108 3215 6.720112 ACTGTATTTGCCATGCTTATCATT 57.280 33.333 0.00 0.00 31.79 2.57
3109 3216 7.666804 TCATACTGTATTTGCCATGCTTATCAT 59.333 33.333 0.00 0.00 35.31 2.45
3110 3217 6.997476 TCATACTGTATTTGCCATGCTTATCA 59.003 34.615 0.00 0.00 0.00 2.15
3111 3218 7.439157 TCATACTGTATTTGCCATGCTTATC 57.561 36.000 0.00 0.00 0.00 1.75
3112 3219 7.886970 AGATCATACTGTATTTGCCATGCTTAT 59.113 33.333 0.00 0.00 0.00 1.73
3113 3220 7.226441 AGATCATACTGTATTTGCCATGCTTA 58.774 34.615 0.00 0.00 0.00 3.09
3114 3221 6.066690 AGATCATACTGTATTTGCCATGCTT 58.933 36.000 0.00 0.00 0.00 3.91
3115 3222 5.628130 AGATCATACTGTATTTGCCATGCT 58.372 37.500 0.00 0.00 0.00 3.79
3116 3223 5.471116 TGAGATCATACTGTATTTGCCATGC 59.529 40.000 0.00 0.00 0.00 4.06
3117 3224 7.683437 ATGAGATCATACTGTATTTGCCATG 57.317 36.000 0.00 0.00 34.26 3.66
3131 3238 7.116736 TGCTTAGGTATCGGTATGAGATCATA 58.883 38.462 0.00 0.00 37.76 2.15
3132 3239 5.952347 TGCTTAGGTATCGGTATGAGATCAT 59.048 40.000 0.31 0.31 40.22 2.45
3133 3240 5.321927 TGCTTAGGTATCGGTATGAGATCA 58.678 41.667 0.00 0.00 0.00 2.92
3134 3241 5.899120 TGCTTAGGTATCGGTATGAGATC 57.101 43.478 0.00 0.00 0.00 2.75
3135 3242 5.717178 ACATGCTTAGGTATCGGTATGAGAT 59.283 40.000 0.00 0.00 0.00 2.75
3136 3243 5.048013 CACATGCTTAGGTATCGGTATGAGA 60.048 44.000 0.00 0.00 0.00 3.27
3137 3244 5.048013 TCACATGCTTAGGTATCGGTATGAG 60.048 44.000 0.00 0.00 0.00 2.90
3138 3245 4.830600 TCACATGCTTAGGTATCGGTATGA 59.169 41.667 0.00 0.00 0.00 2.15
3139 3246 5.134202 TCACATGCTTAGGTATCGGTATG 57.866 43.478 0.00 0.00 0.00 2.39
3140 3247 4.833380 ACTCACATGCTTAGGTATCGGTAT 59.167 41.667 0.00 0.00 0.00 2.73
3141 3248 4.212716 ACTCACATGCTTAGGTATCGGTA 58.787 43.478 0.00 0.00 0.00 4.02
3142 3249 3.031736 ACTCACATGCTTAGGTATCGGT 58.968 45.455 0.00 0.00 0.00 4.69
3143 3250 3.735237 ACTCACATGCTTAGGTATCGG 57.265 47.619 0.00 0.00 0.00 4.18
3144 3251 4.219802 CGTACTCACATGCTTAGGTATCG 58.780 47.826 0.00 0.00 0.00 2.92
3145 3252 5.184340 ACGTACTCACATGCTTAGGTATC 57.816 43.478 0.00 0.00 0.00 2.24
3146 3253 5.591472 TGTACGTACTCACATGCTTAGGTAT 59.409 40.000 25.12 0.00 0.00 2.73
3147 3254 4.943093 TGTACGTACTCACATGCTTAGGTA 59.057 41.667 25.12 0.00 0.00 3.08
3148 3255 3.760151 TGTACGTACTCACATGCTTAGGT 59.240 43.478 25.12 0.00 0.00 3.08
3149 3256 4.142447 ACTGTACGTACTCACATGCTTAGG 60.142 45.833 25.12 0.00 0.00 2.69
3150 3257 4.982999 ACTGTACGTACTCACATGCTTAG 58.017 43.478 25.12 12.86 0.00 2.18
3151 3258 5.412286 TGTACTGTACGTACTCACATGCTTA 59.588 40.000 25.12 1.35 46.89 3.09
3152 3259 3.936372 ACTGTACGTACTCACATGCTT 57.064 42.857 25.12 0.00 0.00 3.91
3153 3260 3.754850 TGTACTGTACGTACTCACATGCT 59.245 43.478 25.12 3.04 46.89 3.79
3154 3261 4.087510 TGTACTGTACGTACTCACATGC 57.912 45.455 25.12 10.69 46.89 4.06
3155 3262 7.242914 TCTATGTACTGTACGTACTCACATG 57.757 40.000 29.77 23.46 46.89 3.21
3156 3263 7.201679 GGTTCTATGTACTGTACGTACTCACAT 60.202 40.741 27.46 27.46 46.89 3.21
3157 3264 6.092670 GGTTCTATGTACTGTACGTACTCACA 59.907 42.308 25.12 22.92 46.89 3.58
3158 3265 6.481984 GGTTCTATGTACTGTACGTACTCAC 58.518 44.000 25.12 18.84 46.89 3.51
3159 3266 5.291858 CGGTTCTATGTACTGTACGTACTCA 59.708 44.000 25.12 17.90 46.89 3.41
3160 3267 5.520288 TCGGTTCTATGTACTGTACGTACTC 59.480 44.000 25.12 13.57 46.89 2.59
3161 3268 5.419542 TCGGTTCTATGTACTGTACGTACT 58.580 41.667 25.12 9.79 46.89 2.73
3162 3269 5.718649 TCGGTTCTATGTACTGTACGTAC 57.281 43.478 18.90 18.90 46.94 3.67
3163 3270 6.148645 TGTTTCGGTTCTATGTACTGTACGTA 59.851 38.462 16.66 16.66 0.00 3.57
3164 3271 5.048782 TGTTTCGGTTCTATGTACTGTACGT 60.049 40.000 16.21 16.21 0.00 3.57
3165 3272 5.393124 TGTTTCGGTTCTATGTACTGTACG 58.607 41.667 12.87 0.00 0.00 3.67
3166 3273 7.256286 AGATGTTTCGGTTCTATGTACTGTAC 58.744 38.462 10.98 10.98 0.00 2.90
3167 3274 7.400599 AGATGTTTCGGTTCTATGTACTGTA 57.599 36.000 0.00 0.00 0.00 2.74
3168 3275 6.282199 AGATGTTTCGGTTCTATGTACTGT 57.718 37.500 0.00 0.00 0.00 3.55
3169 3276 5.749109 GGAGATGTTTCGGTTCTATGTACTG 59.251 44.000 0.00 0.00 0.00 2.74
3170 3277 5.450137 CGGAGATGTTTCGGTTCTATGTACT 60.450 44.000 0.00 0.00 0.00 2.73
3171 3278 4.738740 CGGAGATGTTTCGGTTCTATGTAC 59.261 45.833 0.00 0.00 0.00 2.90
3172 3279 4.400251 ACGGAGATGTTTCGGTTCTATGTA 59.600 41.667 0.00 0.00 0.00 2.29
3173 3280 3.194968 ACGGAGATGTTTCGGTTCTATGT 59.805 43.478 0.00 0.00 0.00 2.29
3174 3281 3.782046 ACGGAGATGTTTCGGTTCTATG 58.218 45.455 0.00 0.00 0.00 2.23
3175 3282 3.181478 GGACGGAGATGTTTCGGTTCTAT 60.181 47.826 0.00 0.00 31.71 1.98
3176 3283 2.165030 GGACGGAGATGTTTCGGTTCTA 59.835 50.000 0.00 0.00 31.71 2.10
3177 3284 1.067071 GGACGGAGATGTTTCGGTTCT 60.067 52.381 0.00 0.00 31.71 3.01
3178 3285 1.337447 TGGACGGAGATGTTTCGGTTC 60.337 52.381 0.00 0.00 31.71 3.62
3179 3286 0.682852 TGGACGGAGATGTTTCGGTT 59.317 50.000 0.00 0.00 31.71 4.44
3180 3287 0.902531 ATGGACGGAGATGTTTCGGT 59.097 50.000 0.00 0.00 33.89 4.69
3181 3288 1.137086 AGATGGACGGAGATGTTTCGG 59.863 52.381 0.00 0.00 0.00 4.30
3182 3289 2.099921 AGAGATGGACGGAGATGTTTCG 59.900 50.000 0.00 0.00 0.00 3.46
3183 3290 3.810310 AGAGATGGACGGAGATGTTTC 57.190 47.619 0.00 0.00 0.00 2.78
3184 3291 4.559862 AAAGAGATGGACGGAGATGTTT 57.440 40.909 0.00 0.00 0.00 2.83
3185 3292 4.256920 CAAAAGAGATGGACGGAGATGTT 58.743 43.478 0.00 0.00 0.00 2.71
3186 3293 3.369892 CCAAAAGAGATGGACGGAGATGT 60.370 47.826 0.00 0.00 40.56 3.06
3187 3294 3.118629 TCCAAAAGAGATGGACGGAGATG 60.119 47.826 0.00 0.00 41.98 2.90
3188 3295 3.107601 TCCAAAAGAGATGGACGGAGAT 58.892 45.455 0.00 0.00 41.98 2.75
3189 3296 2.536066 TCCAAAAGAGATGGACGGAGA 58.464 47.619 0.00 0.00 41.98 3.71
3190 3297 3.003480 GTTCCAAAAGAGATGGACGGAG 58.997 50.000 0.00 0.00 46.37 4.63
3191 3298 2.637872 AGTTCCAAAAGAGATGGACGGA 59.362 45.455 0.00 0.00 46.37 4.69
3192 3299 2.744202 CAGTTCCAAAAGAGATGGACGG 59.256 50.000 0.00 0.00 46.37 4.79
3193 3300 2.160417 GCAGTTCCAAAAGAGATGGACG 59.840 50.000 0.00 0.00 46.37 4.79
3194 3301 2.489722 GGCAGTTCCAAAAGAGATGGAC 59.510 50.000 0.00 0.00 46.37 4.02
3195 3302 2.108075 TGGCAGTTCCAAAAGAGATGGA 59.892 45.455 0.00 0.00 45.09 3.41
3196 3303 2.517959 TGGCAGTTCCAAAAGAGATGG 58.482 47.619 0.00 0.00 43.21 3.51
3206 3313 1.754745 GTGAGAGGTGGCAGTTCCA 59.245 57.895 0.00 0.00 44.18 3.53
3207 3314 1.374758 CGTGAGAGGTGGCAGTTCC 60.375 63.158 0.00 0.00 0.00 3.62
3208 3315 1.666011 TCGTGAGAGGTGGCAGTTC 59.334 57.895 0.00 0.00 34.84 3.01
3209 3316 3.870955 TCGTGAGAGGTGGCAGTT 58.129 55.556 0.00 0.00 34.84 3.16
3219 3326 2.037121 TCTGTCCAAATTGCTCGTGAGA 59.963 45.455 0.00 0.00 39.12 3.27
3220 3327 2.414481 CTCTGTCCAAATTGCTCGTGAG 59.586 50.000 0.00 0.00 0.00 3.51
3221 3328 2.416747 CTCTGTCCAAATTGCTCGTGA 58.583 47.619 0.00 0.00 0.00 4.35
3222 3329 1.466167 CCTCTGTCCAAATTGCTCGTG 59.534 52.381 0.00 0.00 0.00 4.35
3223 3330 1.072331 ACCTCTGTCCAAATTGCTCGT 59.928 47.619 0.00 0.00 0.00 4.18
3224 3331 1.466167 CACCTCTGTCCAAATTGCTCG 59.534 52.381 0.00 0.00 0.00 5.03
3225 3332 1.815003 CCACCTCTGTCCAAATTGCTC 59.185 52.381 0.00 0.00 0.00 4.26
3226 3333 1.915141 CCACCTCTGTCCAAATTGCT 58.085 50.000 0.00 0.00 0.00 3.91
3227 3334 0.244721 GCCACCTCTGTCCAAATTGC 59.755 55.000 0.00 0.00 0.00 3.56
3228 3335 1.915141 AGCCACCTCTGTCCAAATTG 58.085 50.000 0.00 0.00 0.00 2.32
3229 3336 3.074538 ACTTAGCCACCTCTGTCCAAATT 59.925 43.478 0.00 0.00 0.00 1.82
3230 3337 2.644798 ACTTAGCCACCTCTGTCCAAAT 59.355 45.455 0.00 0.00 0.00 2.32
3231 3338 2.054799 ACTTAGCCACCTCTGTCCAAA 58.945 47.619 0.00 0.00 0.00 3.28
3232 3339 1.347707 CACTTAGCCACCTCTGTCCAA 59.652 52.381 0.00 0.00 0.00 3.53
3233 3340 0.976641 CACTTAGCCACCTCTGTCCA 59.023 55.000 0.00 0.00 0.00 4.02
3234 3341 0.250513 CCACTTAGCCACCTCTGTCC 59.749 60.000 0.00 0.00 0.00 4.02
3235 3342 1.267121 TCCACTTAGCCACCTCTGTC 58.733 55.000 0.00 0.00 0.00 3.51
3236 3343 1.729586 TTCCACTTAGCCACCTCTGT 58.270 50.000 0.00 0.00 0.00 3.41
3237 3344 2.636830 CATTCCACTTAGCCACCTCTG 58.363 52.381 0.00 0.00 0.00 3.35
3238 3345 1.561542 CCATTCCACTTAGCCACCTCT 59.438 52.381 0.00 0.00 0.00 3.69
3239 3346 1.559682 TCCATTCCACTTAGCCACCTC 59.440 52.381 0.00 0.00 0.00 3.85
3240 3347 1.561542 CTCCATTCCACTTAGCCACCT 59.438 52.381 0.00 0.00 0.00 4.00
3241 3348 1.408822 CCTCCATTCCACTTAGCCACC 60.409 57.143 0.00 0.00 0.00 4.61
3242 3349 2.019156 GCCTCCATTCCACTTAGCCAC 61.019 57.143 0.00 0.00 0.00 5.01
3243 3350 0.255890 GCCTCCATTCCACTTAGCCA 59.744 55.000 0.00 0.00 0.00 4.75
3244 3351 0.548510 AGCCTCCATTCCACTTAGCC 59.451 55.000 0.00 0.00 0.00 3.93
3245 3352 1.808133 CGAGCCTCCATTCCACTTAGC 60.808 57.143 0.00 0.00 0.00 3.09
3246 3353 1.202580 CCGAGCCTCCATTCCACTTAG 60.203 57.143 0.00 0.00 0.00 2.18
3247 3354 0.830648 CCGAGCCTCCATTCCACTTA 59.169 55.000 0.00 0.00 0.00 2.24
3248 3355 1.604378 CCGAGCCTCCATTCCACTT 59.396 57.895 0.00 0.00 0.00 3.16
3249 3356 3.036429 GCCGAGCCTCCATTCCACT 62.036 63.158 0.00 0.00 0.00 4.00
3250 3357 2.514824 GCCGAGCCTCCATTCCAC 60.515 66.667 0.00 0.00 0.00 4.02
3251 3358 2.688666 AGCCGAGCCTCCATTCCA 60.689 61.111 0.00 0.00 0.00 3.53
3252 3359 1.115930 TAGAGCCGAGCCTCCATTCC 61.116 60.000 0.00 0.00 32.17 3.01
3253 3360 0.316841 CTAGAGCCGAGCCTCCATTC 59.683 60.000 0.00 0.00 32.17 2.67
3254 3361 1.753368 GCTAGAGCCGAGCCTCCATT 61.753 60.000 0.00 0.00 33.60 3.16
3255 3362 2.206536 GCTAGAGCCGAGCCTCCAT 61.207 63.158 0.00 0.00 33.60 3.41
3256 3363 2.835431 GCTAGAGCCGAGCCTCCA 60.835 66.667 0.00 0.00 33.60 3.86
3257 3364 1.753368 AATGCTAGAGCCGAGCCTCC 61.753 60.000 0.00 0.00 39.30 4.30
3258 3365 0.962489 TAATGCTAGAGCCGAGCCTC 59.038 55.000 0.00 0.00 39.30 4.70
3259 3366 0.676736 GTAATGCTAGAGCCGAGCCT 59.323 55.000 0.00 0.00 39.30 4.58
3260 3367 0.319986 GGTAATGCTAGAGCCGAGCC 60.320 60.000 0.00 0.00 39.30 4.70
3261 3368 0.389391 TGGTAATGCTAGAGCCGAGC 59.611 55.000 0.00 1.36 41.18 5.03
3262 3369 2.101582 ACTTGGTAATGCTAGAGCCGAG 59.898 50.000 0.00 0.00 41.18 4.63
3263 3370 2.108168 ACTTGGTAATGCTAGAGCCGA 58.892 47.619 0.00 0.00 41.18 5.54
3264 3371 2.159099 TCACTTGGTAATGCTAGAGCCG 60.159 50.000 0.00 0.00 41.18 5.52
3265 3372 3.543680 TCACTTGGTAATGCTAGAGCC 57.456 47.619 0.00 0.00 41.18 4.70
3266 3373 4.759782 TCTTCACTTGGTAATGCTAGAGC 58.240 43.478 0.00 0.00 42.50 4.09
3267 3374 4.808364 GCTCTTCACTTGGTAATGCTAGAG 59.192 45.833 0.00 0.00 32.21 2.43
3268 3375 4.222810 TGCTCTTCACTTGGTAATGCTAGA 59.777 41.667 0.00 0.00 0.00 2.43
3269 3376 4.507710 TGCTCTTCACTTGGTAATGCTAG 58.492 43.478 0.00 0.00 0.00 3.42
3270 3377 4.507710 CTGCTCTTCACTTGGTAATGCTA 58.492 43.478 0.00 0.00 0.00 3.49
3271 3378 3.341823 CTGCTCTTCACTTGGTAATGCT 58.658 45.455 0.00 0.00 0.00 3.79
3272 3379 2.159462 GCTGCTCTTCACTTGGTAATGC 60.159 50.000 0.00 0.00 0.00 3.56
3273 3380 3.341823 AGCTGCTCTTCACTTGGTAATG 58.658 45.455 0.00 0.00 0.00 1.90
3274 3381 3.008375 TGAGCTGCTCTTCACTTGGTAAT 59.992 43.478 28.04 0.00 0.00 1.89
3275 3382 2.368548 TGAGCTGCTCTTCACTTGGTAA 59.631 45.455 28.04 2.63 0.00 2.85
3276 3383 1.970640 TGAGCTGCTCTTCACTTGGTA 59.029 47.619 28.04 3.16 0.00 3.25
3277 3384 0.761187 TGAGCTGCTCTTCACTTGGT 59.239 50.000 28.04 0.00 0.00 3.67
3278 3385 1.534595 GTTGAGCTGCTCTTCACTTGG 59.465 52.381 28.04 0.00 0.00 3.61
3279 3386 2.032204 GTGTTGAGCTGCTCTTCACTTG 60.032 50.000 30.34 0.00 34.71 3.16
3280 3387 2.216898 GTGTTGAGCTGCTCTTCACTT 58.783 47.619 30.34 2.75 34.71 3.16
3281 3388 1.871408 CGTGTTGAGCTGCTCTTCACT 60.871 52.381 32.03 5.81 35.05 3.41
3282 3389 0.510359 CGTGTTGAGCTGCTCTTCAC 59.490 55.000 29.14 29.14 34.46 3.18
3283 3390 0.389025 TCGTGTTGAGCTGCTCTTCA 59.611 50.000 28.04 22.36 0.00 3.02
3284 3391 0.787183 GTCGTGTTGAGCTGCTCTTC 59.213 55.000 28.04 20.37 0.00 2.87
3285 3392 0.601311 GGTCGTGTTGAGCTGCTCTT 60.601 55.000 28.04 0.00 41.93 2.85
3286 3393 1.005630 GGTCGTGTTGAGCTGCTCT 60.006 57.895 28.04 0.00 41.93 4.09
3287 3394 3.555428 GGTCGTGTTGAGCTGCTC 58.445 61.111 22.38 22.38 41.93 4.26
3292 3399 2.022129 CGTGGAGGTCGTGTTGAGC 61.022 63.158 0.00 0.00 45.59 4.26
3293 3400 1.372997 CCGTGGAGGTCGTGTTGAG 60.373 63.158 0.00 0.00 34.51 3.02
3294 3401 2.732016 CCGTGGAGGTCGTGTTGA 59.268 61.111 0.00 0.00 34.51 3.18
3304 3411 0.249868 TCACTGCTTTGACCGTGGAG 60.250 55.000 0.00 0.00 0.00 3.86
3305 3412 0.396435 ATCACTGCTTTGACCGTGGA 59.604 50.000 0.00 0.00 0.00 4.02
3306 3413 0.798776 GATCACTGCTTTGACCGTGG 59.201 55.000 0.00 0.00 0.00 4.94
3307 3414 0.439985 CGATCACTGCTTTGACCGTG 59.560 55.000 0.00 0.00 0.00 4.94
3308 3415 1.291877 GCGATCACTGCTTTGACCGT 61.292 55.000 4.16 0.00 0.00 4.83
3309 3416 1.421485 GCGATCACTGCTTTGACCG 59.579 57.895 0.00 0.00 0.00 4.79
3310 3417 1.421485 CGCGATCACTGCTTTGACC 59.579 57.895 0.00 0.00 0.00 4.02
3311 3418 1.225854 GCGCGATCACTGCTTTGAC 60.226 57.895 12.10 0.00 0.00 3.18
3312 3419 2.729675 CGCGCGATCACTGCTTTGA 61.730 57.895 28.94 0.00 0.00 2.69
3313 3420 2.276244 CGCGCGATCACTGCTTTG 60.276 61.111 28.94 0.00 0.00 2.77
3314 3421 4.152625 GCGCGCGATCACTGCTTT 62.153 61.111 37.18 0.00 0.00 3.51
3328 3435 4.144681 CACTCTCTGCTTGCGCGC 62.145 66.667 27.26 27.26 39.65 6.86
3329 3436 4.144681 GCACTCTCTGCTTGCGCG 62.145 66.667 0.00 0.00 43.33 6.86
3337 3444 0.035630 CCCCCTTTCTGCACTCTCTG 60.036 60.000 0.00 0.00 0.00 3.35
3338 3445 0.474660 ACCCCCTTTCTGCACTCTCT 60.475 55.000 0.00 0.00 0.00 3.10
3339 3446 1.066071 GTACCCCCTTTCTGCACTCTC 60.066 57.143 0.00 0.00 0.00 3.20
3340 3447 0.984995 GTACCCCCTTTCTGCACTCT 59.015 55.000 0.00 0.00 0.00 3.24
3341 3448 0.035343 GGTACCCCCTTTCTGCACTC 60.035 60.000 0.00 0.00 0.00 3.51
3342 3449 0.770557 TGGTACCCCCTTTCTGCACT 60.771 55.000 10.07 0.00 0.00 4.40
3343 3450 0.331616 ATGGTACCCCCTTTCTGCAC 59.668 55.000 10.07 0.00 0.00 4.57
3344 3451 0.331278 CATGGTACCCCCTTTCTGCA 59.669 55.000 10.07 0.00 0.00 4.41
3345 3452 0.623723 TCATGGTACCCCCTTTCTGC 59.376 55.000 10.07 0.00 0.00 4.26
3346 3453 2.509548 TGATCATGGTACCCCCTTTCTG 59.490 50.000 10.07 0.00 0.00 3.02
3347 3454 2.858644 TGATCATGGTACCCCCTTTCT 58.141 47.619 10.07 0.00 0.00 2.52
3348 3455 3.490348 CATGATCATGGTACCCCCTTTC 58.510 50.000 25.37 0.85 35.24 2.62
3349 3456 3.600448 CATGATCATGGTACCCCCTTT 57.400 47.619 25.37 0.00 35.24 3.11
3360 3467 2.882761 CCTAACAGTGGCCATGATCATG 59.117 50.000 25.97 25.97 38.51 3.07
3361 3468 2.158564 CCCTAACAGTGGCCATGATCAT 60.159 50.000 9.72 1.18 0.00 2.45
3362 3469 1.212688 CCCTAACAGTGGCCATGATCA 59.787 52.381 9.72 0.00 0.00 2.92
3363 3470 1.490490 TCCCTAACAGTGGCCATGATC 59.510 52.381 9.72 0.00 0.00 2.92
3364 3471 1.595311 TCCCTAACAGTGGCCATGAT 58.405 50.000 9.72 5.95 0.00 2.45
3365 3472 1.367346 TTCCCTAACAGTGGCCATGA 58.633 50.000 9.72 0.00 0.00 3.07
3366 3473 2.442236 ATTCCCTAACAGTGGCCATG 57.558 50.000 9.72 11.26 0.00 3.66
3367 3474 4.473444 CATAATTCCCTAACAGTGGCCAT 58.527 43.478 9.72 0.00 0.00 4.40
3368 3475 3.897239 CATAATTCCCTAACAGTGGCCA 58.103 45.455 0.00 0.00 0.00 5.36
3369 3476 2.623416 GCATAATTCCCTAACAGTGGCC 59.377 50.000 0.00 0.00 0.00 5.36
3370 3477 3.287222 TGCATAATTCCCTAACAGTGGC 58.713 45.455 0.00 0.00 0.00 5.01
3371 3478 4.949856 AGTTGCATAATTCCCTAACAGTGG 59.050 41.667 0.00 0.00 0.00 4.00
3372 3479 6.150976 TCAAGTTGCATAATTCCCTAACAGTG 59.849 38.462 0.00 0.00 0.00 3.66
3373 3480 6.245408 TCAAGTTGCATAATTCCCTAACAGT 58.755 36.000 0.00 0.00 0.00 3.55
3374 3481 6.757897 TCAAGTTGCATAATTCCCTAACAG 57.242 37.500 0.00 0.00 0.00 3.16
3375 3482 8.995027 ATATCAAGTTGCATAATTCCCTAACA 57.005 30.769 0.00 0.00 0.00 2.41
3385 3492 9.231297 GCCTCCTAATAATATCAAGTTGCATAA 57.769 33.333 0.00 0.00 0.00 1.90
3386 3493 7.829211 GGCCTCCTAATAATATCAAGTTGCATA 59.171 37.037 0.00 0.00 0.00 3.14
3387 3494 6.660949 GGCCTCCTAATAATATCAAGTTGCAT 59.339 38.462 0.00 0.00 0.00 3.96
3388 3495 6.003950 GGCCTCCTAATAATATCAAGTTGCA 58.996 40.000 0.00 0.00 0.00 4.08
3389 3496 6.003950 TGGCCTCCTAATAATATCAAGTTGC 58.996 40.000 3.32 0.00 0.00 4.17
3390 3497 8.463930 TTTGGCCTCCTAATAATATCAAGTTG 57.536 34.615 3.32 0.00 0.00 3.16
3391 3498 7.231519 GCTTTGGCCTCCTAATAATATCAAGTT 59.768 37.037 3.32 0.00 0.00 2.66
3392 3499 6.717084 GCTTTGGCCTCCTAATAATATCAAGT 59.283 38.462 3.32 0.00 0.00 3.16
3393 3500 7.150783 GCTTTGGCCTCCTAATAATATCAAG 57.849 40.000 3.32 0.00 0.00 3.02
3410 3517 6.764308 ACATGTATATATGATGGCTTTGGC 57.236 37.500 15.59 0.00 37.82 4.52
3411 3518 8.791327 TGTACATGTATATATGATGGCTTTGG 57.209 34.615 15.59 0.00 0.00 3.28
3414 3521 9.881649 CTCTTGTACATGTATATATGATGGCTT 57.118 33.333 15.59 0.00 0.00 4.35
3415 3522 9.259832 TCTCTTGTACATGTATATATGATGGCT 57.740 33.333 15.59 0.00 0.00 4.75
3416 3523 9.875691 TTCTCTTGTACATGTATATATGATGGC 57.124 33.333 15.59 4.16 0.00 4.40
3420 3527 9.875691 GGCATTCTCTTGTACATGTATATATGA 57.124 33.333 15.59 4.89 0.00 2.15
3421 3528 9.657419 TGGCATTCTCTTGTACATGTATATATG 57.343 33.333 9.18 7.84 0.00 1.78
3423 3530 9.710900 CTTGGCATTCTCTTGTACATGTATATA 57.289 33.333 9.18 0.00 0.00 0.86
3424 3531 8.432013 TCTTGGCATTCTCTTGTACATGTATAT 58.568 33.333 9.18 0.00 0.00 0.86
3425 3532 7.791029 TCTTGGCATTCTCTTGTACATGTATA 58.209 34.615 9.18 3.08 0.00 1.47
3426 3533 6.653020 TCTTGGCATTCTCTTGTACATGTAT 58.347 36.000 9.18 0.00 0.00 2.29
3427 3534 6.048732 TCTTGGCATTCTCTTGTACATGTA 57.951 37.500 0.08 0.08 0.00 2.29
3428 3535 4.910195 TCTTGGCATTCTCTTGTACATGT 58.090 39.130 2.69 2.69 0.00 3.21
3429 3536 5.064452 GTCTCTTGGCATTCTCTTGTACATG 59.936 44.000 0.00 0.00 0.00 3.21
3430 3537 5.046014 AGTCTCTTGGCATTCTCTTGTACAT 60.046 40.000 0.00 0.00 0.00 2.29
3431 3538 4.284490 AGTCTCTTGGCATTCTCTTGTACA 59.716 41.667 0.00 0.00 0.00 2.90
3432 3539 4.826556 AGTCTCTTGGCATTCTCTTGTAC 58.173 43.478 0.00 0.00 0.00 2.90
3433 3540 5.952347 TCTAGTCTCTTGGCATTCTCTTGTA 59.048 40.000 0.00 0.00 0.00 2.41
3434 3541 4.774726 TCTAGTCTCTTGGCATTCTCTTGT 59.225 41.667 0.00 0.00 0.00 3.16
3435 3542 5.336150 TCTAGTCTCTTGGCATTCTCTTG 57.664 43.478 0.00 0.00 0.00 3.02
3436 3543 6.558488 ATTCTAGTCTCTTGGCATTCTCTT 57.442 37.500 0.00 0.00 0.00 2.85
3437 3544 6.609212 TGTATTCTAGTCTCTTGGCATTCTCT 59.391 38.462 0.00 0.00 0.00 3.10
3438 3545 6.810911 TGTATTCTAGTCTCTTGGCATTCTC 58.189 40.000 0.00 0.00 0.00 2.87
3439 3546 6.798427 TGTATTCTAGTCTCTTGGCATTCT 57.202 37.500 0.00 0.00 0.00 2.40
3440 3547 7.849804 TTTGTATTCTAGTCTCTTGGCATTC 57.150 36.000 0.00 0.00 0.00 2.67
3441 3548 7.337942 CCTTTTGTATTCTAGTCTCTTGGCATT 59.662 37.037 0.00 0.00 0.00 3.56
3442 3549 6.825721 CCTTTTGTATTCTAGTCTCTTGGCAT 59.174 38.462 0.00 0.00 0.00 4.40
3443 3550 6.173339 CCTTTTGTATTCTAGTCTCTTGGCA 58.827 40.000 0.00 0.00 0.00 4.92
3444 3551 5.065346 GCCTTTTGTATTCTAGTCTCTTGGC 59.935 44.000 0.00 0.00 0.00 4.52
3445 3552 5.586643 GGCCTTTTGTATTCTAGTCTCTTGG 59.413 44.000 0.00 0.00 0.00 3.61
3446 3553 6.173339 TGGCCTTTTGTATTCTAGTCTCTTG 58.827 40.000 3.32 0.00 0.00 3.02
3447 3554 6.374417 TGGCCTTTTGTATTCTAGTCTCTT 57.626 37.500 3.32 0.00 0.00 2.85
3448 3555 6.374417 TTGGCCTTTTGTATTCTAGTCTCT 57.626 37.500 3.32 0.00 0.00 3.10
3449 3556 6.094186 CCTTTGGCCTTTTGTATTCTAGTCTC 59.906 42.308 3.32 0.00 0.00 3.36
3450 3557 5.946377 CCTTTGGCCTTTTGTATTCTAGTCT 59.054 40.000 3.32 0.00 0.00 3.24
3451 3558 5.393135 GCCTTTGGCCTTTTGTATTCTAGTC 60.393 44.000 3.32 0.00 44.06 2.59
3452 3559 4.462834 GCCTTTGGCCTTTTGTATTCTAGT 59.537 41.667 3.32 0.00 44.06 2.57
3453 3560 4.998788 GCCTTTGGCCTTTTGTATTCTAG 58.001 43.478 3.32 0.00 44.06 2.43
3455 3562 3.961480 GCCTTTGGCCTTTTGTATTCT 57.039 42.857 3.32 0.00 44.06 2.40
3473 3580 6.651225 GTGTTAGAGTTATATTGAGGATGGCC 59.349 42.308 0.00 0.00 0.00 5.36
3474 3581 7.171678 GTGTGTTAGAGTTATATTGAGGATGGC 59.828 40.741 0.00 0.00 0.00 4.40
3475 3582 7.657761 GGTGTGTTAGAGTTATATTGAGGATGG 59.342 40.741 0.00 0.00 0.00 3.51
3476 3583 7.657761 GGGTGTGTTAGAGTTATATTGAGGATG 59.342 40.741 0.00 0.00 0.00 3.51
3477 3584 7.202102 GGGGTGTGTTAGAGTTATATTGAGGAT 60.202 40.741 0.00 0.00 0.00 3.24
3478 3585 6.099269 GGGGTGTGTTAGAGTTATATTGAGGA 59.901 42.308 0.00 0.00 0.00 3.71
3479 3586 6.289064 GGGGTGTGTTAGAGTTATATTGAGG 58.711 44.000 0.00 0.00 0.00 3.86
3480 3587 6.289064 GGGGGTGTGTTAGAGTTATATTGAG 58.711 44.000 0.00 0.00 0.00 3.02
3481 3588 6.243216 GGGGGTGTGTTAGAGTTATATTGA 57.757 41.667 0.00 0.00 0.00 2.57
3506 3613 0.257039 CCATGAGTTTGAGGAGGGGG 59.743 60.000 0.00 0.00 0.00 5.40
3507 3614 3.890527 CCATGAGTTTGAGGAGGGG 57.109 57.895 0.00 0.00 0.00 4.79


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.