Multiple sequence alignment - TraesCS2B01G296000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G296000 chr2B 100.000 5511 0 0 1 5511 412988130 412993640 0.000000e+00 10178.0
1 TraesCS2B01G296000 chr2B 84.270 712 100 9 2 706 546909960 546910666 0.000000e+00 684.0
2 TraesCS2B01G296000 chr2D 94.966 3556 114 14 864 4418 347790747 347794238 0.000000e+00 5515.0
3 TraesCS2B01G296000 chr2D 81.134 1235 174 26 1940 3126 347807276 347808499 0.000000e+00 935.0
4 TraesCS2B01G296000 chr2D 90.358 726 46 8 1 705 347777423 347778145 0.000000e+00 931.0
5 TraesCS2B01G296000 chr2D 94.937 553 23 4 4465 5016 347794237 347794785 0.000000e+00 861.0
6 TraesCS2B01G296000 chr2D 78.201 289 57 6 9 294 300873713 300873998 4.390000e-41 180.0
7 TraesCS2B01G296000 chr2D 100.000 29 0 0 715 743 347790682 347790710 3.000000e-03 54.7
8 TraesCS2B01G296000 chr2A 93.522 2470 90 30 837 3271 461388104 461390538 0.000000e+00 3611.0
9 TraesCS2B01G296000 chr2A 95.470 1170 43 6 3322 4482 461390645 461391813 0.000000e+00 1858.0
10 TraesCS2B01G296000 chr2A 88.615 729 57 8 1 706 461275816 461276541 0.000000e+00 863.0
11 TraesCS2B01G296000 chr2A 93.531 371 20 2 4507 4873 461391805 461392175 2.900000e-152 549.0
12 TraesCS2B01G296000 chr2A 97.436 78 2 0 4935 5012 461399366 461399443 3.460000e-27 134.0
13 TraesCS2B01G296000 chr5A 82.224 1187 173 26 1940 3099 569224765 569223590 0.000000e+00 989.0
14 TraesCS2B01G296000 chr5A 81.401 1156 167 31 1989 3123 569183932 569182804 0.000000e+00 900.0
15 TraesCS2B01G296000 chr5A 80.586 1195 193 28 1959 3126 569151632 569152814 0.000000e+00 885.0
16 TraesCS2B01G296000 chr5A 79.163 1291 219 37 1989 3249 569219818 569218548 0.000000e+00 848.0
17 TraesCS2B01G296000 chr5D 80.425 1318 207 35 1962 3248 449940975 449939678 0.000000e+00 957.0
18 TraesCS2B01G296000 chr5D 79.709 1306 213 37 1962 3234 449983278 449981992 0.000000e+00 896.0
19 TraesCS2B01G296000 chr5D 79.607 1324 211 36 1962 3249 449936207 449934907 0.000000e+00 894.0
20 TraesCS2B01G296000 chr5D 81.237 954 138 26 2000 2930 449883760 449884695 0.000000e+00 732.0
21 TraesCS2B01G296000 chr5D 77.576 330 53 10 3715 4029 449939148 449938825 4.390000e-41 180.0
22 TraesCS2B01G296000 chr5D 77.515 338 48 17 3713 4030 449981461 449981132 1.580000e-40 178.0
23 TraesCS2B01G296000 chr7B 83.542 1039 130 32 2091 3100 733359501 733358475 0.000000e+00 933.0
24 TraesCS2B01G296000 chr7B 80.853 1196 172 39 2087 3244 733787983 733789159 0.000000e+00 887.0
25 TraesCS2B01G296000 chr7B 83.562 438 63 9 5078 5510 469467212 469466779 8.600000e-108 401.0
26 TraesCS2B01G296000 chr7B 86.184 152 19 2 3710 3860 733348212 733348062 4.420000e-36 163.0
27 TraesCS2B01G296000 chr7B 86.184 152 19 2 3710 3860 733353358 733353208 4.420000e-36 163.0
28 TraesCS2B01G296000 chr7B 85.526 152 20 2 3710 3860 733343068 733342918 2.060000e-34 158.0
29 TraesCS2B01G296000 chr7B 89.796 98 10 0 3933 4030 733334167 733334070 5.800000e-25 126.0
30 TraesCS2B01G296000 chr7A 81.250 1200 161 45 2091 3237 726859482 726858294 0.000000e+00 911.0
31 TraesCS2B01G296000 chr7A 81.895 475 75 8 5040 5510 654067023 654067490 1.860000e-104 390.0
32 TraesCS2B01G296000 chr7A 81.875 480 59 21 3373 3839 726858223 726857759 4.030000e-101 379.0
33 TraesCS2B01G296000 chr7A 90.741 108 9 1 740 846 709818857 709818750 5.750000e-30 143.0
34 TraesCS2B01G296000 chr7D 83.093 1041 135 35 2088 3100 630713291 630714318 0.000000e+00 909.0
35 TraesCS2B01G296000 chr7D 82.768 708 109 9 7 706 198709954 198710656 2.180000e-173 619.0
36 TraesCS2B01G296000 chr7D 84.598 435 64 3 5078 5510 11043951 11043518 3.940000e-116 429.0
37 TraesCS2B01G296000 chr7D 84.975 406 59 2 5106 5510 65935251 65935655 1.430000e-110 411.0
38 TraesCS2B01G296000 chr7D 82.030 473 78 5 5040 5510 627404517 627404050 4.000000e-106 396.0
39 TraesCS2B01G296000 chr7D 89.231 130 14 0 3710 3839 630325435 630325306 4.420000e-36 163.0
40 TraesCS2B01G296000 chr7D 88.776 98 11 0 3933 4030 630715109 630715206 2.700000e-23 121.0
41 TraesCS2B01G296000 chr5B 79.110 1326 223 41 1962 3249 549949244 549947935 0.000000e+00 865.0
42 TraesCS2B01G296000 chr5B 82.059 1020 149 26 1962 2952 549954194 549953180 0.000000e+00 839.0
43 TraesCS2B01G296000 chr5B 81.359 1030 150 33 2000 2994 549711173 549712195 0.000000e+00 800.0
44 TraesCS2B01G296000 chr5B 92.523 107 7 1 735 840 561916995 561917101 9.560000e-33 152.0
45 TraesCS2B01G296000 chr4A 83.544 711 106 6 2 706 233828557 233827852 0.000000e+00 654.0
46 TraesCS2B01G296000 chr1B 81.303 706 114 11 7 706 542420384 542421077 1.730000e-154 556.0
47 TraesCS2B01G296000 chr1B 85.012 407 58 3 5106 5510 74864165 74864570 1.430000e-110 411.0
48 TraesCS2B01G296000 chr3B 85.504 407 55 4 5106 5510 814904313 814903909 6.600000e-114 422.0
49 TraesCS2B01G296000 chr3B 95.098 102 3 2 742 841 225456500 225456399 5.710000e-35 159.0
50 TraesCS2B01G296000 chr3B 93.458 107 6 1 735 840 629921370 629921476 2.060000e-34 158.0
51 TraesCS2B01G296000 chr6D 84.928 418 56 5 5096 5510 304689014 304688601 3.070000e-112 416.0
52 TraesCS2B01G296000 chr6D 79.181 293 53 6 9 297 464523837 464523549 4.360000e-46 196.0
53 TraesCS2B01G296000 chr4D 82.489 474 77 6 5040 5510 47729258 47728788 1.430000e-110 411.0
54 TraesCS2B01G296000 chr6A 77.931 290 62 2 9 297 445347688 445347400 4.390000e-41 180.0
55 TraesCS2B01G296000 chr6B 93.269 104 5 2 741 843 654640746 654640644 9.560000e-33 152.0
56 TraesCS2B01G296000 chr6B 92.523 107 5 3 741 844 424080502 424080608 3.440000e-32 150.0
57 TraesCS2B01G296000 chr6B 92.523 107 5 3 741 844 424303215 424303321 3.440000e-32 150.0
58 TraesCS2B01G296000 chr4B 92.523 107 7 1 735 840 499586387 499586493 9.560000e-33 152.0
59 TraesCS2B01G296000 chr4B 90.090 111 7 3 734 843 541473711 541473604 2.070000e-29 141.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G296000 chr2B 412988130 412993640 5510 False 10178.000000 10178 100.000000 1 5511 1 chr2B.!!$F1 5510
1 TraesCS2B01G296000 chr2B 546909960 546910666 706 False 684.000000 684 84.270000 2 706 1 chr2B.!!$F2 704
2 TraesCS2B01G296000 chr2D 347790682 347794785 4103 False 2143.566667 5515 96.634333 715 5016 3 chr2D.!!$F4 4301
3 TraesCS2B01G296000 chr2D 347807276 347808499 1223 False 935.000000 935 81.134000 1940 3126 1 chr2D.!!$F3 1186
4 TraesCS2B01G296000 chr2D 347777423 347778145 722 False 931.000000 931 90.358000 1 705 1 chr2D.!!$F2 704
5 TraesCS2B01G296000 chr2A 461388104 461392175 4071 False 2006.000000 3611 94.174333 837 4873 3 chr2A.!!$F3 4036
6 TraesCS2B01G296000 chr2A 461275816 461276541 725 False 863.000000 863 88.615000 1 706 1 chr2A.!!$F1 705
7 TraesCS2B01G296000 chr5A 569218548 569224765 6217 True 918.500000 989 80.693500 1940 3249 2 chr5A.!!$R2 1309
8 TraesCS2B01G296000 chr5A 569182804 569183932 1128 True 900.000000 900 81.401000 1989 3123 1 chr5A.!!$R1 1134
9 TraesCS2B01G296000 chr5A 569151632 569152814 1182 False 885.000000 885 80.586000 1959 3126 1 chr5A.!!$F1 1167
10 TraesCS2B01G296000 chr5D 449883760 449884695 935 False 732.000000 732 81.237000 2000 2930 1 chr5D.!!$F1 930
11 TraesCS2B01G296000 chr5D 449934907 449940975 6068 True 677.000000 957 79.202667 1962 4029 3 chr5D.!!$R1 2067
12 TraesCS2B01G296000 chr5D 449981132 449983278 2146 True 537.000000 896 78.612000 1962 4030 2 chr5D.!!$R2 2068
13 TraesCS2B01G296000 chr7B 733358475 733359501 1026 True 933.000000 933 83.542000 2091 3100 1 chr7B.!!$R6 1009
14 TraesCS2B01G296000 chr7B 733787983 733789159 1176 False 887.000000 887 80.853000 2087 3244 1 chr7B.!!$F1 1157
15 TraesCS2B01G296000 chr7A 726857759 726859482 1723 True 645.000000 911 81.562500 2091 3839 2 chr7A.!!$R2 1748
16 TraesCS2B01G296000 chr7D 198709954 198710656 702 False 619.000000 619 82.768000 7 706 1 chr7D.!!$F2 699
17 TraesCS2B01G296000 chr7D 630713291 630715206 1915 False 515.000000 909 85.934500 2088 4030 2 chr7D.!!$F3 1942
18 TraesCS2B01G296000 chr5B 549947935 549954194 6259 True 852.000000 865 80.584500 1962 3249 2 chr5B.!!$R1 1287
19 TraesCS2B01G296000 chr5B 549711173 549712195 1022 False 800.000000 800 81.359000 2000 2994 1 chr5B.!!$F1 994
20 TraesCS2B01G296000 chr4A 233827852 233828557 705 True 654.000000 654 83.544000 2 706 1 chr4A.!!$R1 704
21 TraesCS2B01G296000 chr1B 542420384 542421077 693 False 556.000000 556 81.303000 7 706 1 chr1B.!!$F2 699

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
683 711 0.389817 TCGATGTCACGAAGCTTGGG 60.390 55.000 13.38 3.02 39.34 4.12 F
1482 1542 0.094730 GCGCGCTTAGAAACGATTGT 59.905 50.000 26.67 0.00 0.00 2.71 F
2047 2118 0.178967 TGCTGCCAAACATGGAGGAA 60.179 50.000 0.00 0.00 0.00 3.36 F
2347 2466 3.646162 ACCTCCTGACAACTAACATCACA 59.354 43.478 0.00 0.00 0.00 3.58 F
3710 4330 3.531538 ACAATATCTGTGATCGGCGTTT 58.468 40.909 6.85 0.00 36.69 3.60 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2313 2402 0.325933 CAGGAGGTCCAACAGATGCA 59.674 55.000 0.0 0.0 38.89 3.96 R
2314 2403 0.615331 TCAGGAGGTCCAACAGATGC 59.385 55.000 0.0 0.0 38.89 3.91 R
3710 4330 2.841881 AGCCCCTAACGATACCTGAAAA 59.158 45.455 0.0 0.0 0.00 2.29 R
4204 4918 0.818445 CTCCATGCACATCTCCCTGC 60.818 60.000 0.0 0.0 0.00 4.85 R
5348 7478 0.034574 ACCAACACACCAGAACAGCA 60.035 50.000 0.0 0.0 0.00 4.41 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
88 89 1.704628 TCTGCCTGTTTTGATGAGGGA 59.295 47.619 0.00 0.00 0.00 4.20
161 164 2.024846 AGCCAAGTCTGCTAGACCTCTA 60.025 50.000 11.24 0.00 46.18 2.43
162 165 2.962421 GCCAAGTCTGCTAGACCTCTAT 59.038 50.000 11.24 0.00 46.18 1.98
163 166 3.005367 GCCAAGTCTGCTAGACCTCTATC 59.995 52.174 11.24 0.00 46.18 2.08
235 257 1.199558 ACTCTCGCACTTCTACGAACC 59.800 52.381 0.00 0.00 37.94 3.62
358 380 3.510360 GCGGTATATGGTCTACATGTCCT 59.490 47.826 0.00 0.00 40.82 3.85
362 384 6.071334 CGGTATATGGTCTACATGTCCTTCAT 60.071 42.308 0.00 5.81 40.82 2.57
363 385 7.525526 CGGTATATGGTCTACATGTCCTTCATT 60.526 40.741 0.00 0.00 40.82 2.57
437 465 2.494073 ACTCTCTAGAACTGAAAGCCCG 59.506 50.000 0.00 0.00 37.60 6.13
453 481 6.316640 TGAAAGCCCGATTTTGTTAATATCGA 59.683 34.615 13.38 0.00 42.70 3.59
454 482 6.687081 AAGCCCGATTTTGTTAATATCGAA 57.313 33.333 13.38 0.00 42.70 3.71
526 554 6.239289 GCTCTCTCAGCTTCCAAGTCTAATAT 60.239 42.308 0.00 0.00 45.83 1.28
626 654 7.467557 TCTCATGTTCTGAAAAATGCAAAAC 57.532 32.000 0.00 0.00 31.15 2.43
629 657 3.868077 TGTTCTGAAAAATGCAAAACGGG 59.132 39.130 0.00 0.00 0.00 5.28
655 683 8.284945 ACAACTCGTATTAACAGACATACCTA 57.715 34.615 0.00 0.00 0.00 3.08
683 711 0.389817 TCGATGTCACGAAGCTTGGG 60.390 55.000 13.38 3.02 39.34 4.12
706 734 1.600663 CCCTCATAGCACGCTCTAACG 60.601 57.143 0.00 0.00 39.50 3.18
707 735 1.600663 CCTCATAGCACGCTCTAACGG 60.601 57.143 0.00 0.00 37.37 4.44
708 736 1.333931 CTCATAGCACGCTCTAACGGA 59.666 52.381 0.00 0.00 37.37 4.69
709 737 1.954382 TCATAGCACGCTCTAACGGAT 59.046 47.619 0.00 0.00 37.37 4.18
710 738 2.031069 TCATAGCACGCTCTAACGGATC 60.031 50.000 0.00 0.00 37.37 3.36
711 739 1.385528 TAGCACGCTCTAACGGATCA 58.614 50.000 0.00 0.00 37.37 2.92
712 740 0.747255 AGCACGCTCTAACGGATCAT 59.253 50.000 0.00 0.00 37.37 2.45
713 741 1.132588 GCACGCTCTAACGGATCATC 58.867 55.000 0.00 0.00 37.37 2.92
740 768 4.451891 TGCTCCATAGGGCATTATTGAA 57.548 40.909 0.00 0.00 33.23 2.69
741 769 5.001833 TGCTCCATAGGGCATTATTGAAT 57.998 39.130 0.00 0.00 33.23 2.57
742 770 6.138391 TGCTCCATAGGGCATTATTGAATA 57.862 37.500 0.00 0.00 33.23 1.75
743 771 5.945784 TGCTCCATAGGGCATTATTGAATAC 59.054 40.000 0.00 0.00 33.23 1.89
744 772 6.183347 GCTCCATAGGGCATTATTGAATACT 58.817 40.000 0.00 0.00 0.00 2.12
745 773 6.317391 GCTCCATAGGGCATTATTGAATACTC 59.683 42.308 0.00 0.00 0.00 2.59
746 774 6.721318 TCCATAGGGCATTATTGAATACTCC 58.279 40.000 0.00 0.00 0.00 3.85
747 775 5.888161 CCATAGGGCATTATTGAATACTCCC 59.112 44.000 7.24 7.24 32.45 4.30
748 776 6.297243 CCATAGGGCATTATTGAATACTCCCT 60.297 42.308 17.05 17.05 39.75 4.20
749 777 5.248380 AGGGCATTATTGAATACTCCCTC 57.752 43.478 10.57 0.00 35.38 4.30
750 778 4.043435 AGGGCATTATTGAATACTCCCTCC 59.957 45.833 10.57 0.00 35.38 4.30
751 779 4.003648 GGCATTATTGAATACTCCCTCCG 58.996 47.826 0.00 0.00 0.00 4.63
752 780 4.505039 GGCATTATTGAATACTCCCTCCGT 60.505 45.833 0.00 0.00 0.00 4.69
753 781 4.691216 GCATTATTGAATACTCCCTCCGTC 59.309 45.833 0.00 0.00 0.00 4.79
754 782 5.511545 GCATTATTGAATACTCCCTCCGTCT 60.512 44.000 0.00 0.00 0.00 4.18
755 783 5.786264 TTATTGAATACTCCCTCCGTCTC 57.214 43.478 0.00 0.00 0.00 3.36
756 784 2.820728 TGAATACTCCCTCCGTCTCA 57.179 50.000 0.00 0.00 0.00 3.27
757 785 3.095912 TGAATACTCCCTCCGTCTCAA 57.904 47.619 0.00 0.00 0.00 3.02
758 786 3.437213 TGAATACTCCCTCCGTCTCAAA 58.563 45.455 0.00 0.00 0.00 2.69
759 787 3.835978 TGAATACTCCCTCCGTCTCAAAA 59.164 43.478 0.00 0.00 0.00 2.44
760 788 4.469945 TGAATACTCCCTCCGTCTCAAAAT 59.530 41.667 0.00 0.00 0.00 1.82
761 789 5.659525 TGAATACTCCCTCCGTCTCAAAATA 59.340 40.000 0.00 0.00 0.00 1.40
762 790 6.155565 TGAATACTCCCTCCGTCTCAAAATAA 59.844 38.462 0.00 0.00 0.00 1.40
763 791 4.473477 ACTCCCTCCGTCTCAAAATAAG 57.527 45.455 0.00 0.00 0.00 1.73
764 792 3.838903 ACTCCCTCCGTCTCAAAATAAGT 59.161 43.478 0.00 0.00 0.00 2.24
765 793 4.184629 CTCCCTCCGTCTCAAAATAAGTG 58.815 47.826 0.00 0.00 0.00 3.16
766 794 3.581332 TCCCTCCGTCTCAAAATAAGTGT 59.419 43.478 0.00 0.00 0.00 3.55
767 795 3.933332 CCCTCCGTCTCAAAATAAGTGTC 59.067 47.826 0.00 0.00 0.00 3.67
768 796 4.322801 CCCTCCGTCTCAAAATAAGTGTCT 60.323 45.833 0.00 0.00 0.00 3.41
769 797 5.105473 CCCTCCGTCTCAAAATAAGTGTCTA 60.105 44.000 0.00 0.00 0.00 2.59
770 798 6.395629 CCTCCGTCTCAAAATAAGTGTCTAA 58.604 40.000 0.00 0.00 0.00 2.10
771 799 6.310711 CCTCCGTCTCAAAATAAGTGTCTAAC 59.689 42.308 0.00 0.00 0.00 2.34
772 800 6.989659 TCCGTCTCAAAATAAGTGTCTAACT 58.010 36.000 0.00 0.00 42.60 2.24
788 816 9.571816 AGTGTCTAACTTTGTACTAGTTCTAGT 57.428 33.333 15.38 15.38 34.57 2.57
827 855 7.198306 AGTTTAAGACACTTATTTTGGGACG 57.802 36.000 0.00 0.00 0.00 4.79
828 856 6.206048 AGTTTAAGACACTTATTTTGGGACGG 59.794 38.462 0.00 0.00 0.00 4.79
829 857 4.360951 AAGACACTTATTTTGGGACGGA 57.639 40.909 0.00 0.00 0.00 4.69
830 858 3.939066 AGACACTTATTTTGGGACGGAG 58.061 45.455 0.00 0.00 0.00 4.63
831 859 3.007635 GACACTTATTTTGGGACGGAGG 58.992 50.000 0.00 0.00 0.00 4.30
832 860 2.640826 ACACTTATTTTGGGACGGAGGA 59.359 45.455 0.00 0.00 0.00 3.71
833 861 3.073356 ACACTTATTTTGGGACGGAGGAA 59.927 43.478 0.00 0.00 0.00 3.36
834 862 3.689649 CACTTATTTTGGGACGGAGGAAG 59.310 47.826 0.00 0.00 0.00 3.46
835 863 3.329814 ACTTATTTTGGGACGGAGGAAGT 59.670 43.478 0.00 0.00 0.00 3.01
881 921 1.138464 GTAGATCGGGGTTCAACCTCC 59.862 57.143 6.51 5.26 34.38 4.30
971 1011 4.143301 GGCCCCATCCCCCTTGTC 62.143 72.222 0.00 0.00 0.00 3.18
1071 1112 1.298859 GCGGAATCTTCAACACGCCT 61.299 55.000 0.00 0.00 41.02 5.52
1120 1161 6.689663 ATCCCCTTACTAGCCTTTTATCTC 57.310 41.667 0.00 0.00 0.00 2.75
1133 1174 7.749666 AGCCTTTTATCTCTATTGCTCCATTA 58.250 34.615 0.00 0.00 0.00 1.90
1264 1305 2.336809 CGCGTAGAGGAGGGATGC 59.663 66.667 0.00 0.00 0.00 3.91
1276 1317 3.516700 AGGAGGGATGCCTTGAATTTTTG 59.483 43.478 7.42 0.00 29.44 2.44
1278 1319 2.908351 AGGGATGCCTTGAATTTTTGCT 59.092 40.909 0.00 0.00 0.00 3.91
1334 1375 3.410631 TTTGCGGTTCCTAATCACAGA 57.589 42.857 0.00 0.00 0.00 3.41
1455 1515 8.734030 CAACAGAACAGAAAAGTAACGAATTTC 58.266 33.333 0.00 0.00 34.14 2.17
1482 1542 0.094730 GCGCGCTTAGAAACGATTGT 59.905 50.000 26.67 0.00 0.00 2.71
1490 1550 2.519377 AGAAACGATTGTCCGTGTCA 57.481 45.000 8.96 0.00 46.28 3.58
1496 1556 3.655486 ACGATTGTCCGTGTCATAAACA 58.345 40.909 0.00 0.00 41.70 2.83
1599 1663 9.978336 AGTACTACCTTGGTATATATTCCTCTC 57.022 37.037 9.53 0.00 0.00 3.20
1602 1666 9.482175 ACTACCTTGGTATATATTCCTCTCATC 57.518 37.037 9.53 0.00 0.00 2.92
1603 1667 7.741554 ACCTTGGTATATATTCCTCTCATCC 57.258 40.000 9.53 0.00 0.00 3.51
1633 1697 8.560355 TGCAGATCTAAGTGCACTAAATTAAA 57.440 30.769 22.01 0.00 44.70 1.52
1634 1698 9.177608 TGCAGATCTAAGTGCACTAAATTAAAT 57.822 29.630 22.01 3.99 44.70 1.40
1646 1710 9.921637 TGCACTAAATTAAATTTACCAAGAAGG 57.078 29.630 0.00 0.00 37.25 3.46
1647 1711 9.366216 GCACTAAATTAAATTTACCAAGAAGGG 57.634 33.333 0.00 0.00 36.24 3.95
1694 1758 4.183865 TCTGGTCGAGCATGTATTCTTTG 58.816 43.478 18.98 2.22 0.00 2.77
1709 1773 9.685276 ATGTATTCTTTGTCATCCAATTCACTA 57.315 29.630 0.00 0.00 31.81 2.74
2026 2097 5.598830 AGAAGTAGAGTGTGAAGTTCCAAGA 59.401 40.000 0.00 0.00 0.00 3.02
2047 2118 0.178967 TGCTGCCAAACATGGAGGAA 60.179 50.000 0.00 0.00 0.00 3.36
2309 2395 5.769484 ATGTCCATTTCATCTCTTGCATC 57.231 39.130 0.00 0.00 0.00 3.91
2313 2402 5.125097 GTCCATTTCATCTCTTGCATCTGTT 59.875 40.000 0.00 0.00 0.00 3.16
2314 2403 5.124936 TCCATTTCATCTCTTGCATCTGTTG 59.875 40.000 0.00 0.00 0.00 3.33
2346 2448 4.246458 GACCTCCTGACAACTAACATCAC 58.754 47.826 0.00 0.00 0.00 3.06
2347 2466 3.646162 ACCTCCTGACAACTAACATCACA 59.354 43.478 0.00 0.00 0.00 3.58
2364 2485 6.460781 ACATCACATTGCTTTGTTCATGATT 58.539 32.000 0.00 0.00 0.00 2.57
2782 2903 4.141711 GCCAATACCATCTCTTACCTGACA 60.142 45.833 0.00 0.00 0.00 3.58
2987 3239 6.377996 TCGTCCATCTCCAATTGAATTTCATT 59.622 34.615 7.12 0.00 0.00 2.57
3128 3463 8.570488 TCATATGCATGGTTTATTTCACATCTC 58.430 33.333 10.16 0.00 32.61 2.75
3194 3543 7.958025 GCTGCAGTTTAAATACTCTTTCACTAC 59.042 37.037 16.64 0.00 0.00 2.73
3244 3643 4.210120 GCAGCTATAAGGTCAGATTGAACG 59.790 45.833 0.00 0.00 39.55 3.95
3261 3660 5.773239 TGAACGACTCGAATTCATAAACC 57.227 39.130 5.20 0.00 0.00 3.27
3263 3662 5.347635 TGAACGACTCGAATTCATAAACCTG 59.652 40.000 5.20 0.00 0.00 4.00
3264 3663 5.068234 ACGACTCGAATTCATAAACCTGA 57.932 39.130 5.20 0.00 0.00 3.86
3710 4330 3.531538 ACAATATCTGTGATCGGCGTTT 58.468 40.909 6.85 0.00 36.69 3.60
4204 4918 5.102313 GCACAATTTTCTCGGGAAATTAGG 58.898 41.667 12.07 6.95 40.57 2.69
4421 5247 8.884726 GGGAATAAAATGTCTCTTCACTAGAAC 58.115 37.037 0.00 0.00 30.91 3.01
4611 5437 3.069586 TGATTACGATTGAGGGCCACTAG 59.930 47.826 6.18 0.00 0.00 2.57
4666 5492 4.280677 CAGGACAAATAAAACAAGGAGGCA 59.719 41.667 0.00 0.00 0.00 4.75
4724 5550 0.316689 GGCGGTGACAAAAGTGTTCG 60.317 55.000 0.00 0.00 38.41 3.95
4780 5606 4.217159 GTAGTAGCGTGGCCCCGG 62.217 72.222 10.36 0.00 0.00 5.73
4806 6632 2.689083 GGCAAAACTTGGTGTTGGC 58.311 52.632 10.52 10.52 46.13 4.52
4874 7003 3.291584 TGTGTCCCTGATCTAGTGCTAG 58.708 50.000 0.00 0.00 34.56 3.42
4876 7005 4.079958 TGTGTCCCTGATCTAGTGCTAGTA 60.080 45.833 6.18 0.00 34.84 1.82
4949 7079 1.337703 GGTGTGCAAAACTGAGATGCA 59.662 47.619 7.90 7.90 46.97 3.96
5017 7147 1.527034 TCAAGACAGCTCAATGTGGC 58.473 50.000 0.00 0.00 32.25 5.01
5018 7148 1.202794 TCAAGACAGCTCAATGTGGCA 60.203 47.619 0.00 0.00 32.25 4.92
5019 7149 1.199327 CAAGACAGCTCAATGTGGCAG 59.801 52.381 0.00 0.00 32.25 4.85
5020 7150 0.959372 AGACAGCTCAATGTGGCAGC 60.959 55.000 0.00 0.00 32.25 5.25
5023 7153 4.487412 GCTCAATGTGGCAGCCGC 62.487 66.667 18.93 18.93 37.44 6.53
5034 7164 4.860881 CAGCCGCCTCCTCCCCTA 62.861 72.222 0.00 0.00 0.00 3.53
5035 7165 4.089757 AGCCGCCTCCTCCCCTAA 62.090 66.667 0.00 0.00 0.00 2.69
5036 7166 3.087906 GCCGCCTCCTCCCCTAAA 61.088 66.667 0.00 0.00 0.00 1.85
5037 7167 2.676265 GCCGCCTCCTCCCCTAAAA 61.676 63.158 0.00 0.00 0.00 1.52
5038 7168 1.996086 CCGCCTCCTCCCCTAAAAA 59.004 57.895 0.00 0.00 0.00 1.94
5052 7182 3.361174 AAAAATGGGGACGCGGTG 58.639 55.556 12.47 0.00 0.00 4.94
5055 7185 2.493273 AAAATGGGGACGCGGTGGAT 62.493 55.000 12.47 0.00 0.00 3.41
5056 7186 2.886730 AAATGGGGACGCGGTGGATC 62.887 60.000 12.47 0.00 0.00 3.36
5070 7200 2.653702 GATCCCGATCCTCGCCTG 59.346 66.667 0.00 0.00 38.82 4.85
5071 7201 2.123251 ATCCCGATCCTCGCCTGT 60.123 61.111 0.00 0.00 38.82 4.00
5072 7202 2.427540 GATCCCGATCCTCGCCTGTG 62.428 65.000 0.00 0.00 38.82 3.66
5073 7203 4.227134 CCCGATCCTCGCCTGTGG 62.227 72.222 0.00 0.00 38.82 4.17
5074 7204 4.227134 CCGATCCTCGCCTGTGGG 62.227 72.222 0.00 0.00 38.82 4.61
5077 7207 1.450312 GATCCTCGCCTGTGGGTTG 60.450 63.158 0.00 0.00 34.45 3.77
5081 7211 4.329545 TCGCCTGTGGGTTGGCTC 62.330 66.667 0.00 0.00 46.42 4.70
5084 7214 2.765969 CCTGTGGGTTGGCTCCAT 59.234 61.111 0.00 0.00 36.58 3.41
5087 7217 0.890683 CTGTGGGTTGGCTCCATTTC 59.109 55.000 0.00 0.00 36.58 2.17
5088 7218 0.187117 TGTGGGTTGGCTCCATTTCA 59.813 50.000 0.00 0.00 36.58 2.69
5089 7219 0.603065 GTGGGTTGGCTCCATTTCAC 59.397 55.000 0.00 0.00 36.58 3.18
5092 7222 1.612199 GGGTTGGCTCCATTTCACGTA 60.612 52.381 0.00 0.00 0.00 3.57
5093 7223 2.365582 GGTTGGCTCCATTTCACGTAT 58.634 47.619 0.00 0.00 0.00 3.06
5100 7230 6.559810 TGGCTCCATTTCACGTATATTTTTG 58.440 36.000 0.00 0.00 0.00 2.44
5101 7231 6.375736 TGGCTCCATTTCACGTATATTTTTGA 59.624 34.615 0.00 0.00 0.00 2.69
5104 7234 9.301153 GCTCCATTTCACGTATATTTTTGAATT 57.699 29.630 0.00 0.00 0.00 2.17
5119 7249 8.661352 ATTTTTGAATTTTGTTAGGGTCTGTG 57.339 30.769 0.00 0.00 0.00 3.66
5120 7250 6.783708 TTTGAATTTTGTTAGGGTCTGTGT 57.216 33.333 0.00 0.00 0.00 3.72
5121 7251 6.385649 TTGAATTTTGTTAGGGTCTGTGTC 57.614 37.500 0.00 0.00 0.00 3.67
5122 7252 5.441500 TGAATTTTGTTAGGGTCTGTGTCA 58.558 37.500 0.00 0.00 0.00 3.58
5123 7253 6.068010 TGAATTTTGTTAGGGTCTGTGTCAT 58.932 36.000 0.00 0.00 0.00 3.06
5124 7254 5.964958 ATTTTGTTAGGGTCTGTGTCATG 57.035 39.130 0.00 0.00 0.00 3.07
5125 7255 2.472695 TGTTAGGGTCTGTGTCATGC 57.527 50.000 0.00 0.00 0.00 4.06
5127 7257 2.028112 TGTTAGGGTCTGTGTCATGCTC 60.028 50.000 0.00 0.00 0.00 4.26
5128 7258 1.937191 TAGGGTCTGTGTCATGCTCA 58.063 50.000 0.00 0.00 0.00 4.26
5129 7259 0.612229 AGGGTCTGTGTCATGCTCAG 59.388 55.000 10.87 10.87 39.38 3.35
5130 7260 0.610174 GGGTCTGTGTCATGCTCAGA 59.390 55.000 14.01 14.01 43.10 3.27
5131 7261 1.002430 GGGTCTGTGTCATGCTCAGAA 59.998 52.381 17.48 5.82 45.65 3.02
5132 7262 2.550855 GGGTCTGTGTCATGCTCAGAAA 60.551 50.000 17.48 2.04 45.65 2.52
5134 7264 3.397482 GTCTGTGTCATGCTCAGAAAGT 58.603 45.455 17.48 0.00 45.65 2.66
5135 7265 3.431572 GTCTGTGTCATGCTCAGAAAGTC 59.568 47.826 17.48 7.26 45.65 3.01
5136 7266 2.407090 TGTGTCATGCTCAGAAAGTCG 58.593 47.619 0.00 0.00 0.00 4.18
5137 7267 2.035832 TGTGTCATGCTCAGAAAGTCGA 59.964 45.455 0.00 0.00 0.00 4.20
5138 7268 2.665537 GTGTCATGCTCAGAAAGTCGAG 59.334 50.000 0.00 0.00 0.00 4.04
5139 7269 2.558359 TGTCATGCTCAGAAAGTCGAGA 59.442 45.455 0.00 0.00 0.00 4.04
5140 7270 2.920490 GTCATGCTCAGAAAGTCGAGAC 59.080 50.000 0.00 0.00 0.00 3.36
5141 7271 1.916651 CATGCTCAGAAAGTCGAGACG 59.083 52.381 0.00 0.00 36.20 4.18
5142 7272 1.235724 TGCTCAGAAAGTCGAGACGA 58.764 50.000 0.00 0.00 36.20 4.20
5143 7273 1.197949 TGCTCAGAAAGTCGAGACGAG 59.802 52.381 0.00 0.03 36.23 4.18
5144 7274 1.466697 GCTCAGAAAGTCGAGACGAGG 60.467 57.143 0.00 0.00 36.23 4.63
5146 7276 1.535896 TCAGAAAGTCGAGACGAGGTG 59.464 52.381 0.00 0.00 36.23 4.00
5147 7277 0.882474 AGAAAGTCGAGACGAGGTGG 59.118 55.000 0.00 0.00 36.23 4.61
5149 7279 1.179814 AAAGTCGAGACGAGGTGGCT 61.180 55.000 0.00 0.00 36.23 4.75
5151 7281 0.107116 AGTCGAGACGAGGTGGCTAT 60.107 55.000 0.00 0.00 36.23 2.97
5152 7282 0.308376 GTCGAGACGAGGTGGCTATC 59.692 60.000 0.00 0.00 36.23 2.08
5153 7283 0.180642 TCGAGACGAGGTGGCTATCT 59.819 55.000 0.00 0.00 0.00 1.98
5154 7284 0.309302 CGAGACGAGGTGGCTATCTG 59.691 60.000 0.00 0.00 0.00 2.90
5156 7286 2.025155 GAGACGAGGTGGCTATCTGAA 58.975 52.381 0.00 0.00 0.00 3.02
5157 7287 2.028130 AGACGAGGTGGCTATCTGAAG 58.972 52.381 0.00 0.00 0.00 3.02
5158 7288 2.025155 GACGAGGTGGCTATCTGAAGA 58.975 52.381 0.00 0.00 0.00 2.87
5159 7289 2.625790 GACGAGGTGGCTATCTGAAGAT 59.374 50.000 0.00 0.00 38.51 2.40
5160 7290 2.363680 ACGAGGTGGCTATCTGAAGATG 59.636 50.000 2.99 0.00 36.05 2.90
5161 7291 2.288702 CGAGGTGGCTATCTGAAGATGG 60.289 54.545 2.99 1.23 36.05 3.51
5162 7292 2.968574 GAGGTGGCTATCTGAAGATGGA 59.031 50.000 7.77 0.00 35.34 3.41
5164 7294 3.979347 AGGTGGCTATCTGAAGATGGAAT 59.021 43.478 7.77 0.00 35.34 3.01
5167 7297 5.936956 GGTGGCTATCTGAAGATGGAATAAG 59.063 44.000 7.77 0.00 35.34 1.73
5168 7298 5.936956 GTGGCTATCTGAAGATGGAATAAGG 59.063 44.000 7.77 0.00 35.34 2.69
5169 7299 4.940654 GGCTATCTGAAGATGGAATAAGGC 59.059 45.833 7.77 2.76 35.34 4.35
5170 7300 5.280419 GGCTATCTGAAGATGGAATAAGGCT 60.280 44.000 7.77 0.00 35.34 4.58
5171 7301 5.874261 GCTATCTGAAGATGGAATAAGGCTC 59.126 44.000 7.77 0.00 35.34 4.70
5172 7302 6.295802 GCTATCTGAAGATGGAATAAGGCTCT 60.296 42.308 7.77 0.00 35.34 4.09
5173 7303 5.965033 TCTGAAGATGGAATAAGGCTCTT 57.035 39.130 0.00 0.00 0.00 2.85
5174 7304 5.923204 TCTGAAGATGGAATAAGGCTCTTC 58.077 41.667 0.00 0.00 41.28 2.87
5175 7305 5.041191 TGAAGATGGAATAAGGCTCTTCC 57.959 43.478 17.58 17.58 40.57 3.46
5176 7306 4.141390 TGAAGATGGAATAAGGCTCTTCCC 60.141 45.833 20.20 10.09 40.57 3.97
5178 7308 3.137360 AGATGGAATAAGGCTCTTCCCAC 59.863 47.826 20.20 15.23 40.22 4.61
5180 7310 1.847088 GGAATAAGGCTCTTCCCACCT 59.153 52.381 14.79 0.00 35.83 4.00
5181 7311 3.046374 GGAATAAGGCTCTTCCCACCTA 58.954 50.000 14.79 0.00 35.83 3.08
5182 7312 3.071747 GGAATAAGGCTCTTCCCACCTAG 59.928 52.174 14.79 0.00 35.83 3.02
5183 7313 2.942604 TAAGGCTCTTCCCACCTAGT 57.057 50.000 0.00 0.00 32.08 2.57
5185 7315 0.325765 AGGCTCTTCCCACCTAGTCC 60.326 60.000 0.00 0.00 34.51 3.85
5186 7316 1.338890 GGCTCTTCCCACCTAGTCCC 61.339 65.000 0.00 0.00 0.00 4.46
5187 7317 1.338890 GCTCTTCCCACCTAGTCCCC 61.339 65.000 0.00 0.00 0.00 4.81
5188 7318 0.042731 CTCTTCCCACCTAGTCCCCA 59.957 60.000 0.00 0.00 0.00 4.96
5189 7319 0.252558 TCTTCCCACCTAGTCCCCAC 60.253 60.000 0.00 0.00 0.00 4.61
5193 7323 1.614241 CCCACCTAGTCCCCACTTCG 61.614 65.000 0.00 0.00 33.62 3.79
5194 7324 1.614241 CCACCTAGTCCCCACTTCGG 61.614 65.000 0.00 0.00 33.62 4.30
5195 7325 0.903454 CACCTAGTCCCCACTTCGGT 60.903 60.000 0.00 0.00 36.26 4.69
5196 7326 0.903454 ACCTAGTCCCCACTTCGGTG 60.903 60.000 0.00 0.00 44.92 4.94
5204 7334 4.701663 CACTTCGGTGGTGCATCT 57.298 55.556 0.00 0.00 41.88 2.90
5205 7335 3.832704 CACTTCGGTGGTGCATCTA 57.167 52.632 0.00 0.00 41.88 1.98
5207 7337 1.732259 CACTTCGGTGGTGCATCTAAC 59.268 52.381 0.00 0.00 41.88 2.34
5209 7339 2.027192 ACTTCGGTGGTGCATCTAACAT 60.027 45.455 0.00 0.00 0.00 2.71
5211 7341 0.930310 CGGTGGTGCATCTAACATCG 59.070 55.000 0.00 0.00 0.00 3.84
5213 7343 1.933853 GGTGGTGCATCTAACATCGTC 59.066 52.381 0.00 0.00 0.00 4.20
5214 7344 1.588404 GTGGTGCATCTAACATCGTCG 59.412 52.381 0.00 0.00 0.00 5.12
5215 7345 1.209128 GGTGCATCTAACATCGTCGG 58.791 55.000 0.00 0.00 0.00 4.79
5217 7347 1.588404 GTGCATCTAACATCGTCGGTG 59.412 52.381 3.36 3.36 0.00 4.94
5218 7348 1.209128 GCATCTAACATCGTCGGTGG 58.791 55.000 10.81 0.00 0.00 4.61
5219 7349 1.852942 CATCTAACATCGTCGGTGGG 58.147 55.000 10.81 0.00 0.00 4.61
5220 7350 0.104304 ATCTAACATCGTCGGTGGGC 59.896 55.000 10.81 0.00 0.00 5.36
5221 7351 1.876714 CTAACATCGTCGGTGGGCG 60.877 63.158 10.81 0.00 0.00 6.13
5222 7352 2.552585 CTAACATCGTCGGTGGGCGT 62.553 60.000 10.81 0.00 0.00 5.68
5223 7353 2.822418 TAACATCGTCGGTGGGCGTG 62.822 60.000 10.81 0.00 0.00 5.34
5224 7354 4.735132 CATCGTCGGTGGGCGTGT 62.735 66.667 0.00 0.00 0.00 4.49
5225 7355 4.735132 ATCGTCGGTGGGCGTGTG 62.735 66.667 0.00 0.00 0.00 3.82
5232 7362 4.626081 GTGGGCGTGTGGAGCTGT 62.626 66.667 0.00 0.00 34.52 4.40
5233 7363 4.624364 TGGGCGTGTGGAGCTGTG 62.624 66.667 0.00 0.00 34.52 3.66
5234 7364 4.626081 GGGCGTGTGGAGCTGTGT 62.626 66.667 0.00 0.00 34.52 3.72
5235 7365 3.044305 GGCGTGTGGAGCTGTGTC 61.044 66.667 0.00 0.00 34.52 3.67
5236 7366 2.029666 GCGTGTGGAGCTGTGTCT 59.970 61.111 0.00 0.00 0.00 3.41
5237 7367 1.595382 GCGTGTGGAGCTGTGTCTT 60.595 57.895 0.00 0.00 0.00 3.01
5238 7368 1.560860 GCGTGTGGAGCTGTGTCTTC 61.561 60.000 0.00 0.00 0.00 2.87
5241 7371 1.367840 GTGGAGCTGTGTCTTCGGT 59.632 57.895 0.00 0.00 0.00 4.69
5243 7373 1.374758 GGAGCTGTGTCTTCGGTGG 60.375 63.158 0.00 0.00 0.00 4.61
5244 7374 1.666011 GAGCTGTGTCTTCGGTGGA 59.334 57.895 0.00 0.00 0.00 4.02
5245 7375 0.247736 GAGCTGTGTCTTCGGTGGAT 59.752 55.000 0.00 0.00 0.00 3.41
5247 7377 2.101582 GAGCTGTGTCTTCGGTGGATAT 59.898 50.000 0.00 0.00 0.00 1.63
5248 7378 2.159043 AGCTGTGTCTTCGGTGGATATG 60.159 50.000 0.00 0.00 0.00 1.78
5249 7379 2.205074 CTGTGTCTTCGGTGGATATGC 58.795 52.381 0.00 0.00 0.00 3.14
5251 7381 1.139058 GTGTCTTCGGTGGATATGCCT 59.861 52.381 0.00 0.00 37.63 4.75
5253 7383 2.238646 TGTCTTCGGTGGATATGCCTTT 59.761 45.455 0.00 0.00 37.63 3.11
5254 7384 2.614057 GTCTTCGGTGGATATGCCTTTG 59.386 50.000 0.00 0.00 37.63 2.77
5255 7385 1.949525 CTTCGGTGGATATGCCTTTGG 59.050 52.381 0.00 0.00 37.63 3.28
5256 7386 0.916086 TCGGTGGATATGCCTTTGGT 59.084 50.000 0.00 0.00 37.63 3.67
5257 7387 1.024271 CGGTGGATATGCCTTTGGTG 58.976 55.000 0.00 0.00 37.63 4.17
5258 7388 1.402787 GGTGGATATGCCTTTGGTGG 58.597 55.000 0.00 0.00 37.63 4.61
5259 7389 1.064017 GGTGGATATGCCTTTGGTGGA 60.064 52.381 0.00 0.00 37.63 4.02
5261 7391 3.299503 GTGGATATGCCTTTGGTGGATT 58.700 45.455 0.00 0.00 37.63 3.01
5262 7392 3.706086 GTGGATATGCCTTTGGTGGATTT 59.294 43.478 0.00 0.00 37.63 2.17
5265 7395 5.140454 GGATATGCCTTTGGTGGATTTACT 58.860 41.667 0.00 0.00 0.00 2.24
5266 7396 5.241728 GGATATGCCTTTGGTGGATTTACTC 59.758 44.000 0.00 0.00 0.00 2.59
5267 7397 2.432444 TGCCTTTGGTGGATTTACTCG 58.568 47.619 0.00 0.00 0.00 4.18
5268 7398 1.743394 GCCTTTGGTGGATTTACTCGG 59.257 52.381 0.00 0.00 0.00 4.63
5269 7399 2.617021 GCCTTTGGTGGATTTACTCGGA 60.617 50.000 0.00 0.00 0.00 4.55
5270 7400 3.886123 CCTTTGGTGGATTTACTCGGAT 58.114 45.455 0.00 0.00 0.00 4.18
5272 7402 4.384208 CCTTTGGTGGATTTACTCGGATCT 60.384 45.833 0.00 0.00 0.00 2.75
5273 7403 5.163343 CCTTTGGTGGATTTACTCGGATCTA 60.163 44.000 0.00 0.00 0.00 1.98
5274 7404 6.464465 CCTTTGGTGGATTTACTCGGATCTAT 60.464 42.308 0.00 0.00 0.00 1.98
5276 7406 6.097915 TGGTGGATTTACTCGGATCTATTC 57.902 41.667 0.00 0.00 0.00 1.75
5277 7407 5.162075 GGTGGATTTACTCGGATCTATTCG 58.838 45.833 0.00 0.00 0.00 3.34
5278 7408 5.278858 GGTGGATTTACTCGGATCTATTCGT 60.279 44.000 0.00 0.00 0.00 3.85
5280 7410 5.533528 TGGATTTACTCGGATCTATTCGTCA 59.466 40.000 0.00 0.00 0.00 4.35
5281 7411 6.208797 TGGATTTACTCGGATCTATTCGTCAT 59.791 38.462 0.00 0.00 0.00 3.06
5282 7412 7.091443 GGATTTACTCGGATCTATTCGTCATT 58.909 38.462 0.00 0.00 0.00 2.57
5284 7414 4.148563 ACTCGGATCTATTCGTCATTCG 57.851 45.455 0.00 0.00 41.41 3.34
5285 7415 3.564644 ACTCGGATCTATTCGTCATTCGT 59.435 43.478 0.00 0.00 40.80 3.85
5286 7416 4.143194 TCGGATCTATTCGTCATTCGTC 57.857 45.455 0.00 0.00 40.80 4.20
5287 7417 3.813724 TCGGATCTATTCGTCATTCGTCT 59.186 43.478 0.00 0.00 40.80 4.18
5288 7418 4.992951 TCGGATCTATTCGTCATTCGTCTA 59.007 41.667 0.00 0.00 40.80 2.59
5289 7419 5.642491 TCGGATCTATTCGTCATTCGTCTAT 59.358 40.000 0.00 0.00 40.80 1.98
5292 7422 7.085116 GGATCTATTCGTCATTCGTCTATGTT 58.915 38.462 0.00 0.00 40.80 2.71
5293 7423 7.595502 GGATCTATTCGTCATTCGTCTATGTTT 59.404 37.037 0.00 0.00 40.80 2.83
5294 7424 7.679659 TCTATTCGTCATTCGTCTATGTTTG 57.320 36.000 0.00 0.00 40.80 2.93
5295 7425 7.255569 TCTATTCGTCATTCGTCTATGTTTGT 58.744 34.615 0.00 0.00 40.80 2.83
5297 7427 4.552355 TCGTCATTCGTCTATGTTTGTGT 58.448 39.130 0.00 0.00 40.80 3.72
5298 7428 5.701855 TCGTCATTCGTCTATGTTTGTGTA 58.298 37.500 0.00 0.00 40.80 2.90
5299 7429 6.327154 TCGTCATTCGTCTATGTTTGTGTAT 58.673 36.000 0.00 0.00 40.80 2.29
5301 7431 6.472486 CGTCATTCGTCTATGTTTGTGTATCT 59.528 38.462 0.00 0.00 34.52 1.98
5302 7432 7.009265 CGTCATTCGTCTATGTTTGTGTATCTT 59.991 37.037 0.00 0.00 34.52 2.40
5303 7433 8.321716 GTCATTCGTCTATGTTTGTGTATCTTC 58.678 37.037 0.00 0.00 0.00 2.87
5304 7434 8.032451 TCATTCGTCTATGTTTGTGTATCTTCA 58.968 33.333 0.00 0.00 0.00 3.02
5306 7436 6.330278 TCGTCTATGTTTGTGTATCTTCAGG 58.670 40.000 0.00 0.00 0.00 3.86
5307 7437 6.071560 TCGTCTATGTTTGTGTATCTTCAGGT 60.072 38.462 0.00 0.00 0.00 4.00
5311 7441 8.154203 TCTATGTTTGTGTATCTTCAGGTTGAA 58.846 33.333 0.00 0.00 34.79 2.69
5312 7442 7.765695 ATGTTTGTGTATCTTCAGGTTGAAT 57.234 32.000 0.00 0.00 35.59 2.57
5313 7443 7.581213 TGTTTGTGTATCTTCAGGTTGAATT 57.419 32.000 0.00 0.00 35.59 2.17
5315 7445 7.502226 TGTTTGTGTATCTTCAGGTTGAATTCT 59.498 33.333 7.05 0.00 35.59 2.40
5316 7446 8.352942 GTTTGTGTATCTTCAGGTTGAATTCTT 58.647 33.333 7.05 0.00 35.59 2.52
5317 7447 7.672983 TGTGTATCTTCAGGTTGAATTCTTC 57.327 36.000 7.05 0.00 35.59 2.87
5319 7449 6.655003 GTGTATCTTCAGGTTGAATTCTTCCA 59.345 38.462 17.18 2.27 35.59 3.53
5320 7450 7.174946 GTGTATCTTCAGGTTGAATTCTTCCAA 59.825 37.037 17.18 6.98 35.59 3.53
5321 7451 6.581171 ATCTTCAGGTTGAATTCTTCCAAC 57.419 37.500 17.18 9.71 41.24 3.77
5329 7459 6.790285 GTTGAATTCTTCCAACCTACGTTA 57.210 37.500 7.05 0.00 37.32 3.18
5330 7460 6.596703 GTTGAATTCTTCCAACCTACGTTAC 58.403 40.000 7.05 0.00 37.32 2.50
5331 7461 6.105397 TGAATTCTTCCAACCTACGTTACT 57.895 37.500 7.05 0.00 0.00 2.24
5332 7462 6.161381 TGAATTCTTCCAACCTACGTTACTC 58.839 40.000 7.05 0.00 0.00 2.59
5333 7463 5.997384 ATTCTTCCAACCTACGTTACTCT 57.003 39.130 0.00 0.00 0.00 3.24
5334 7464 5.796424 TTCTTCCAACCTACGTTACTCTT 57.204 39.130 0.00 0.00 0.00 2.85
5335 7465 5.382618 TCTTCCAACCTACGTTACTCTTC 57.617 43.478 0.00 0.00 0.00 2.87
5336 7466 4.828939 TCTTCCAACCTACGTTACTCTTCA 59.171 41.667 0.00 0.00 0.00 3.02
5337 7467 5.479375 TCTTCCAACCTACGTTACTCTTCAT 59.521 40.000 0.00 0.00 0.00 2.57
5338 7468 5.320549 TCCAACCTACGTTACTCTTCATC 57.679 43.478 0.00 0.00 0.00 2.92
5339 7469 4.103357 CCAACCTACGTTACTCTTCATCG 58.897 47.826 0.00 0.00 0.00 3.84
5340 7470 4.103357 CAACCTACGTTACTCTTCATCGG 58.897 47.826 0.00 0.00 0.00 4.18
5341 7471 2.098770 ACCTACGTTACTCTTCATCGGC 59.901 50.000 0.00 0.00 0.00 5.54
5342 7472 2.373269 CTACGTTACTCTTCATCGGCG 58.627 52.381 0.00 0.00 0.00 6.46
5343 7473 0.179145 ACGTTACTCTTCATCGGCGG 60.179 55.000 7.21 0.00 0.00 6.13
5344 7474 1.480219 CGTTACTCTTCATCGGCGGC 61.480 60.000 7.21 0.00 0.00 6.53
5345 7475 1.226859 TTACTCTTCATCGGCGGCG 60.227 57.895 27.15 27.15 0.00 6.46
5346 7476 2.622903 TTACTCTTCATCGGCGGCGG 62.623 60.000 31.73 16.54 0.00 6.13
5347 7477 4.514577 CTCTTCATCGGCGGCGGT 62.515 66.667 31.73 23.77 0.00 5.68
5348 7478 4.077184 TCTTCATCGGCGGCGGTT 62.077 61.111 31.73 16.58 0.00 4.44
5349 7479 3.864686 CTTCATCGGCGGCGGTTG 61.865 66.667 31.73 26.46 0.00 3.77
5358 7488 3.726517 CGGCGGTTGCTGTTCTGG 61.727 66.667 0.00 0.00 42.79 3.86
5360 7490 2.639286 GCGGTTGCTGTTCTGGTG 59.361 61.111 0.00 0.00 38.39 4.17
5362 7492 1.648720 CGGTTGCTGTTCTGGTGTG 59.351 57.895 0.00 0.00 0.00 3.82
5363 7493 1.095228 CGGTTGCTGTTCTGGTGTGT 61.095 55.000 0.00 0.00 0.00 3.72
5364 7494 1.102978 GGTTGCTGTTCTGGTGTGTT 58.897 50.000 0.00 0.00 0.00 3.32
5366 7496 1.102154 TTGCTGTTCTGGTGTGTTGG 58.898 50.000 0.00 0.00 0.00 3.77
5367 7497 0.034574 TGCTGTTCTGGTGTGTTGGT 60.035 50.000 0.00 0.00 0.00 3.67
5368 7498 0.663153 GCTGTTCTGGTGTGTTGGTC 59.337 55.000 0.00 0.00 0.00 4.02
5369 7499 1.308998 CTGTTCTGGTGTGTTGGTCC 58.691 55.000 0.00 0.00 0.00 4.46
5371 7501 2.104111 CTGTTCTGGTGTGTTGGTCCTA 59.896 50.000 0.00 0.00 0.00 2.94
5372 7502 2.708861 TGTTCTGGTGTGTTGGTCCTAT 59.291 45.455 0.00 0.00 0.00 2.57
5373 7503 3.074412 GTTCTGGTGTGTTGGTCCTATG 58.926 50.000 0.00 0.00 0.00 2.23
5374 7504 2.615391 TCTGGTGTGTTGGTCCTATGA 58.385 47.619 0.00 0.00 0.00 2.15
5375 7505 2.567169 TCTGGTGTGTTGGTCCTATGAG 59.433 50.000 0.00 0.00 0.00 2.90
5376 7506 1.628340 TGGTGTGTTGGTCCTATGAGG 59.372 52.381 0.00 0.00 36.46 3.86
5377 7507 1.679032 GGTGTGTTGGTCCTATGAGGC 60.679 57.143 0.00 0.00 34.61 4.70
5378 7508 0.618458 TGTGTTGGTCCTATGAGGCC 59.382 55.000 0.00 0.00 34.61 5.19
5380 7510 1.282157 GTGTTGGTCCTATGAGGCCTT 59.718 52.381 6.77 0.00 34.61 4.35
5381 7511 2.504175 GTGTTGGTCCTATGAGGCCTTA 59.496 50.000 6.77 1.66 34.61 2.69
5382 7512 2.771943 TGTTGGTCCTATGAGGCCTTAG 59.228 50.000 6.77 5.46 34.61 2.18
5383 7513 1.424638 TGGTCCTATGAGGCCTTAGC 58.575 55.000 6.77 0.00 34.61 3.09
5384 7514 1.343985 TGGTCCTATGAGGCCTTAGCA 60.344 52.381 6.77 0.00 42.56 3.49
5385 7515 1.981495 GGTCCTATGAGGCCTTAGCAT 59.019 52.381 6.77 8.88 42.56 3.79
5387 7517 2.634940 GTCCTATGAGGCCTTAGCATGA 59.365 50.000 6.77 0.00 42.56 3.07
5389 7519 2.611473 CCTATGAGGCCTTAGCATGACG 60.611 54.545 6.77 0.00 42.56 4.35
5390 7520 1.123077 ATGAGGCCTTAGCATGACGA 58.877 50.000 6.77 0.00 42.56 4.20
5397 7603 1.927174 CCTTAGCATGACGACTTTCCG 59.073 52.381 0.00 0.00 0.00 4.30
5401 7607 0.716108 GCATGACGACTTTCCGACTG 59.284 55.000 0.00 0.00 0.00 3.51
5403 7609 1.986378 CATGACGACTTTCCGACTGTC 59.014 52.381 0.00 0.00 0.00 3.51
5404 7610 1.315690 TGACGACTTTCCGACTGTCT 58.684 50.000 6.21 0.00 0.00 3.41
5409 7615 3.434984 ACGACTTTCCGACTGTCTACTAC 59.565 47.826 6.21 0.00 0.00 2.73
5412 7618 5.118642 ACTTTCCGACTGTCTACTACAAC 57.881 43.478 6.21 0.00 37.74 3.32
5415 7621 4.011966 TCCGACTGTCTACTACAACAGA 57.988 45.455 9.32 0.00 44.54 3.41
5416 7622 4.586884 TCCGACTGTCTACTACAACAGAT 58.413 43.478 9.32 0.00 44.54 2.90
5418 7624 5.475909 TCCGACTGTCTACTACAACAGATTT 59.524 40.000 9.32 0.00 44.54 2.17
5421 7627 6.400091 CGACTGTCTACTACAACAGATTTTGC 60.400 42.308 9.32 0.00 44.54 3.68
5423 7629 5.001232 TGTCTACTACAACAGATTTTGCCC 58.999 41.667 0.00 0.00 34.29 5.36
5424 7630 4.092968 GTCTACTACAACAGATTTTGCCCG 59.907 45.833 0.00 0.00 0.00 6.13
5425 7631 2.159382 ACTACAACAGATTTTGCCCGG 58.841 47.619 0.00 0.00 0.00 5.73
5426 7632 0.885196 TACAACAGATTTTGCCCGGC 59.115 50.000 1.04 1.04 0.00 6.13
5427 7633 0.827507 ACAACAGATTTTGCCCGGCT 60.828 50.000 11.61 0.00 0.00 5.52
5430 7636 2.438434 AGATTTTGCCCGGCTCCG 60.438 61.111 11.61 0.48 39.44 4.63
5440 7646 2.125512 CGGCTCCGGTGAAGGAAG 60.126 66.667 7.92 0.00 40.25 3.46
5441 7647 2.646175 CGGCTCCGGTGAAGGAAGA 61.646 63.158 7.92 0.00 40.25 2.87
5445 7651 1.257743 CTCCGGTGAAGGAAGAGTGA 58.742 55.000 0.00 0.00 40.25 3.41
5448 7654 1.550524 CCGGTGAAGGAAGAGTGATGA 59.449 52.381 0.00 0.00 0.00 2.92
5449 7655 2.611518 CGGTGAAGGAAGAGTGATGAC 58.388 52.381 0.00 0.00 0.00 3.06
5450 7656 2.611518 GGTGAAGGAAGAGTGATGACG 58.388 52.381 0.00 0.00 0.00 4.35
5451 7657 2.611518 GTGAAGGAAGAGTGATGACGG 58.388 52.381 0.00 0.00 0.00 4.79
5452 7658 2.028930 GTGAAGGAAGAGTGATGACGGT 60.029 50.000 0.00 0.00 0.00 4.83
5453 7659 2.029020 TGAAGGAAGAGTGATGACGGTG 60.029 50.000 0.00 0.00 0.00 4.94
5456 7662 1.078759 GAAGAGTGATGACGGTGGCG 61.079 60.000 0.00 0.00 0.00 5.69
5462 7668 4.373116 ATGACGGTGGCGCGTCTT 62.373 61.111 13.81 12.40 36.25 3.01
5472 7678 2.432628 CGCGTCTTCGGCTTCCTT 60.433 61.111 0.00 0.00 37.56 3.36
5473 7679 2.445438 CGCGTCTTCGGCTTCCTTC 61.445 63.158 0.00 0.00 37.56 3.46
5474 7680 1.374252 GCGTCTTCGGCTTCCTTCA 60.374 57.895 0.00 0.00 37.56 3.02
5475 7681 1.355066 GCGTCTTCGGCTTCCTTCAG 61.355 60.000 0.00 0.00 37.56 3.02
5476 7682 0.038159 CGTCTTCGGCTTCCTTCAGT 60.038 55.000 0.00 0.00 0.00 3.41
5478 7684 0.320771 TCTTCGGCTTCCTTCAGTGC 60.321 55.000 0.00 0.00 0.00 4.40
5480 7686 0.108585 TTCGGCTTCCTTCAGTGCTT 59.891 50.000 0.00 0.00 0.00 3.91
5483 7689 1.608025 CGGCTTCCTTCAGTGCTTGTA 60.608 52.381 0.00 0.00 0.00 2.41
5484 7690 2.079925 GGCTTCCTTCAGTGCTTGTAG 58.920 52.381 0.00 0.00 0.00 2.74
5485 7691 2.551071 GGCTTCCTTCAGTGCTTGTAGT 60.551 50.000 0.00 0.00 0.00 2.73
5486 7692 2.739379 GCTTCCTTCAGTGCTTGTAGTC 59.261 50.000 0.00 0.00 0.00 2.59
5487 7693 2.724977 TCCTTCAGTGCTTGTAGTCG 57.275 50.000 0.00 0.00 0.00 4.18
5488 7694 1.071605 CCTTCAGTGCTTGTAGTCGC 58.928 55.000 0.00 0.00 0.00 5.19
5489 7695 1.071605 CTTCAGTGCTTGTAGTCGCC 58.928 55.000 0.00 0.00 0.00 5.54
5490 7696 0.391228 TTCAGTGCTTGTAGTCGCCA 59.609 50.000 0.00 0.00 0.00 5.69
5491 7697 0.319555 TCAGTGCTTGTAGTCGCCAC 60.320 55.000 0.00 0.00 0.00 5.01
5492 7698 0.319900 CAGTGCTTGTAGTCGCCACT 60.320 55.000 0.00 0.00 36.55 4.00
5495 7701 1.067776 GTGCTTGTAGTCGCCACTAGT 60.068 52.381 0.00 0.00 35.67 2.57
5497 7703 1.993370 GCTTGTAGTCGCCACTAGTTG 59.007 52.381 0.00 0.00 35.67 3.16
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
300 322 1.302752 GCTGCCACCAGTCACATGA 60.303 57.895 0.00 0.00 41.26 3.07
358 380 6.724441 TGAGTTAGAGGGAACAGAGTAATGAA 59.276 38.462 0.00 0.00 0.00 2.57
362 384 6.075984 AGTTGAGTTAGAGGGAACAGAGTAA 58.924 40.000 0.00 0.00 0.00 2.24
363 385 5.642165 AGTTGAGTTAGAGGGAACAGAGTA 58.358 41.667 0.00 0.00 0.00 2.59
453 481 3.683847 GCTGTGAGGCCTATGAATGAGTT 60.684 47.826 4.42 0.00 0.00 3.01
454 482 2.158842 GCTGTGAGGCCTATGAATGAGT 60.159 50.000 4.42 0.00 0.00 3.41
538 566 6.013032 TCCAATGGGAAGGAAATTGCAAAATA 60.013 34.615 1.71 0.00 41.32 1.40
626 654 3.855950 GTCTGTTAATACGAGTTGTCCCG 59.144 47.826 0.00 0.00 0.00 5.14
629 657 7.256286 AGGTATGTCTGTTAATACGAGTTGTC 58.744 38.462 0.00 0.00 31.29 3.18
700 728 2.158957 GCAACAGGGATGATCCGTTAGA 60.159 50.000 3.52 0.00 37.43 2.10
706 734 3.410960 GGAGCAACAGGGATGATCC 57.589 57.895 1.94 1.94 45.10 3.36
707 735 2.653234 ATGGAGCAACAGGGATGATC 57.347 50.000 0.00 0.00 32.58 2.92
708 736 2.374504 CCTATGGAGCAACAGGGATGAT 59.625 50.000 0.00 0.00 0.00 2.45
709 737 1.770658 CCTATGGAGCAACAGGGATGA 59.229 52.381 0.00 0.00 0.00 2.92
710 738 2.267174 CCTATGGAGCAACAGGGATG 57.733 55.000 0.00 0.00 0.00 3.51
740 768 5.661759 ACTTATTTTGAGACGGAGGGAGTAT 59.338 40.000 0.00 0.00 0.00 2.12
741 769 5.021458 ACTTATTTTGAGACGGAGGGAGTA 58.979 41.667 0.00 0.00 0.00 2.59
742 770 3.838903 ACTTATTTTGAGACGGAGGGAGT 59.161 43.478 0.00 0.00 0.00 3.85
743 771 4.184629 CACTTATTTTGAGACGGAGGGAG 58.815 47.826 0.00 0.00 0.00 4.30
744 772 3.581332 ACACTTATTTTGAGACGGAGGGA 59.419 43.478 0.00 0.00 0.00 4.20
745 773 3.933332 GACACTTATTTTGAGACGGAGGG 59.067 47.826 0.00 0.00 0.00 4.30
746 774 4.822026 AGACACTTATTTTGAGACGGAGG 58.178 43.478 0.00 0.00 0.00 4.30
747 775 7.091443 AGTTAGACACTTATTTTGAGACGGAG 58.909 38.462 0.00 0.00 27.32 4.63
748 776 6.989659 AGTTAGACACTTATTTTGAGACGGA 58.010 36.000 0.00 0.00 27.32 4.69
749 777 7.653767 AAGTTAGACACTTATTTTGAGACGG 57.346 36.000 0.00 0.00 44.56 4.79
750 778 8.548721 ACAAAGTTAGACACTTATTTTGAGACG 58.451 33.333 10.77 0.00 45.77 4.18
762 790 9.571816 ACTAGAACTAGTACAAAGTTAGACACT 57.428 33.333 12.07 8.31 43.98 3.55
801 829 8.776470 CGTCCCAAAATAAGTGTCTTAAACTTA 58.224 33.333 1.70 1.70 42.63 2.24
802 830 7.255346 CCGTCCCAAAATAAGTGTCTTAAACTT 60.255 37.037 0.00 0.00 40.82 2.66
803 831 6.206048 CCGTCCCAAAATAAGTGTCTTAAACT 59.794 38.462 0.00 0.00 0.00 2.66
804 832 6.205270 TCCGTCCCAAAATAAGTGTCTTAAAC 59.795 38.462 0.00 0.00 0.00 2.01
805 833 6.297582 TCCGTCCCAAAATAAGTGTCTTAAA 58.702 36.000 0.00 0.00 0.00 1.52
806 834 5.867330 TCCGTCCCAAAATAAGTGTCTTAA 58.133 37.500 0.00 0.00 0.00 1.85
807 835 5.484715 CTCCGTCCCAAAATAAGTGTCTTA 58.515 41.667 0.00 0.00 0.00 2.10
808 836 4.324267 CTCCGTCCCAAAATAAGTGTCTT 58.676 43.478 0.00 0.00 0.00 3.01
809 837 3.307480 CCTCCGTCCCAAAATAAGTGTCT 60.307 47.826 0.00 0.00 0.00 3.41
810 838 3.007635 CCTCCGTCCCAAAATAAGTGTC 58.992 50.000 0.00 0.00 0.00 3.67
811 839 2.640826 TCCTCCGTCCCAAAATAAGTGT 59.359 45.455 0.00 0.00 0.00 3.55
812 840 3.343941 TCCTCCGTCCCAAAATAAGTG 57.656 47.619 0.00 0.00 0.00 3.16
813 841 3.329814 ACTTCCTCCGTCCCAAAATAAGT 59.670 43.478 0.00 0.00 0.00 2.24
814 842 3.951663 ACTTCCTCCGTCCCAAAATAAG 58.048 45.455 0.00 0.00 0.00 1.73
815 843 5.703730 ATACTTCCTCCGTCCCAAAATAA 57.296 39.130 0.00 0.00 0.00 1.40
816 844 6.811634 TTATACTTCCTCCGTCCCAAAATA 57.188 37.500 0.00 0.00 0.00 1.40
817 845 5.703730 TTATACTTCCTCCGTCCCAAAAT 57.296 39.130 0.00 0.00 0.00 1.82
818 846 5.703730 ATTATACTTCCTCCGTCCCAAAA 57.296 39.130 0.00 0.00 0.00 2.44
819 847 8.495160 TTATATTATACTTCCTCCGTCCCAAA 57.505 34.615 0.00 0.00 0.00 3.28
820 848 8.674925 ATTATATTATACTTCCTCCGTCCCAA 57.325 34.615 0.00 0.00 0.00 4.12
821 849 9.772605 TTATTATATTATACTTCCTCCGTCCCA 57.227 33.333 0.00 0.00 0.00 4.37
861 889 1.138464 GGAGGTTGAACCCCGATCTAC 59.862 57.143 11.41 0.00 39.75 2.59
971 1011 1.338579 GGCAGAACAAGTCCTCCTCAG 60.339 57.143 0.00 0.00 0.00 3.35
1120 1161 5.226396 CGAACCTCTCTAATGGAGCAATAG 58.774 45.833 0.00 0.00 41.60 1.73
1133 1174 0.892063 GAGAAGTGGCGAACCTCTCT 59.108 55.000 8.73 0.00 41.44 3.10
1264 1305 3.193267 TCCATCCGAGCAAAAATTCAAGG 59.807 43.478 0.00 0.00 0.00 3.61
1276 1317 1.601430 GCTTCTTGAATCCATCCGAGC 59.399 52.381 0.00 0.00 0.00 5.03
1278 1319 1.559219 TGGCTTCTTGAATCCATCCGA 59.441 47.619 2.22 0.00 0.00 4.55
1334 1375 2.440539 AGCGAATCAACTGACGAGTT 57.559 45.000 0.00 0.00 43.63 3.01
1455 1515 3.535860 GTTTCTAAGCGCGCATATCTTG 58.464 45.455 35.10 13.82 0.00 3.02
1482 1542 3.206964 TGCAAACTGTTTATGACACGGA 58.793 40.909 5.31 0.00 33.82 4.69
1599 1663 4.151335 GCACTTAGATCTGCAATACGGATG 59.849 45.833 5.18 0.00 44.82 3.51
1602 1666 3.246226 GTGCACTTAGATCTGCAATACGG 59.754 47.826 10.32 0.00 44.82 4.02
1603 1667 4.115516 AGTGCACTTAGATCTGCAATACG 58.884 43.478 15.25 0.00 44.82 3.06
1636 1700 8.660435 CCATTTCTATTCTATCCCTTCTTGGTA 58.340 37.037 0.00 0.00 0.00 3.25
1637 1701 7.521669 CCATTTCTATTCTATCCCTTCTTGGT 58.478 38.462 0.00 0.00 0.00 3.67
1638 1702 6.432472 GCCATTTCTATTCTATCCCTTCTTGG 59.568 42.308 0.00 0.00 0.00 3.61
1639 1703 7.000472 TGCCATTTCTATTCTATCCCTTCTTG 59.000 38.462 0.00 0.00 0.00 3.02
1640 1704 7.154191 TGCCATTTCTATTCTATCCCTTCTT 57.846 36.000 0.00 0.00 0.00 2.52
1641 1705 6.770286 TGCCATTTCTATTCTATCCCTTCT 57.230 37.500 0.00 0.00 0.00 2.85
1642 1706 7.887495 AGATTGCCATTTCTATTCTATCCCTTC 59.113 37.037 0.00 0.00 0.00 3.46
1643 1707 7.763613 AGATTGCCATTTCTATTCTATCCCTT 58.236 34.615 0.00 0.00 0.00 3.95
1644 1708 7.340531 AGATTGCCATTTCTATTCTATCCCT 57.659 36.000 0.00 0.00 0.00 4.20
1645 1709 7.449704 ACAAGATTGCCATTTCTATTCTATCCC 59.550 37.037 0.00 0.00 0.00 3.85
1646 1710 8.401490 ACAAGATTGCCATTTCTATTCTATCC 57.599 34.615 0.00 0.00 0.00 2.59
1647 1711 9.890352 GAACAAGATTGCCATTTCTATTCTATC 57.110 33.333 0.00 0.00 0.00 2.08
1648 1712 9.638176 AGAACAAGATTGCCATTTCTATTCTAT 57.362 29.630 0.00 0.00 0.00 1.98
1649 1713 8.896744 CAGAACAAGATTGCCATTTCTATTCTA 58.103 33.333 0.00 0.00 0.00 2.10
1650 1714 7.147949 CCAGAACAAGATTGCCATTTCTATTCT 60.148 37.037 0.00 0.00 0.00 2.40
1651 1715 6.976925 CCAGAACAAGATTGCCATTTCTATTC 59.023 38.462 0.00 0.00 0.00 1.75
1652 1716 6.438425 ACCAGAACAAGATTGCCATTTCTATT 59.562 34.615 0.00 0.00 0.00 1.73
1694 1758 6.237942 CGACAATCTGTAGTGAATTGGATGAC 60.238 42.308 0.00 0.00 0.00 3.06
1709 1773 7.285629 TGAGAGAATAACTATCCGACAATCTGT 59.714 37.037 0.00 0.00 36.16 3.41
1928 1992 6.095440 CGTGGAAGAAGATACCAATGGATTTT 59.905 38.462 6.16 0.00 35.40 1.82
2026 2097 0.899720 CCTCCATGTTTGGCAGCATT 59.100 50.000 0.00 0.00 43.29 3.56
2047 2118 1.153756 CTTGCCTCCAACAAGGGGT 59.846 57.895 0.00 0.00 40.68 4.95
2309 2395 1.808945 GAGGTCCAACAGATGCAACAG 59.191 52.381 0.00 0.00 0.00 3.16
2313 2402 0.325933 CAGGAGGTCCAACAGATGCA 59.674 55.000 0.00 0.00 38.89 3.96
2314 2403 0.615331 TCAGGAGGTCCAACAGATGC 59.385 55.000 0.00 0.00 38.89 3.91
2315 2404 1.625315 TGTCAGGAGGTCCAACAGATG 59.375 52.381 0.00 0.00 38.89 2.90
2316 2405 2.030027 TGTCAGGAGGTCCAACAGAT 57.970 50.000 0.00 0.00 38.89 2.90
2317 2406 1.416401 GTTGTCAGGAGGTCCAACAGA 59.584 52.381 0.00 0.00 37.66 3.41
2318 2407 1.417890 AGTTGTCAGGAGGTCCAACAG 59.582 52.381 0.00 0.00 39.63 3.16
2319 2408 1.507140 AGTTGTCAGGAGGTCCAACA 58.493 50.000 0.00 0.00 39.63 3.33
2320 2409 3.181458 TGTTAGTTGTCAGGAGGTCCAAC 60.181 47.826 0.00 0.00 38.89 3.77
2321 2410 3.042682 TGTTAGTTGTCAGGAGGTCCAA 58.957 45.455 0.00 0.00 38.89 3.53
2346 2448 8.600625 CCTCAAATAATCATGAACAAAGCAATG 58.399 33.333 0.00 0.00 0.00 2.82
2347 2466 7.279313 GCCTCAAATAATCATGAACAAAGCAAT 59.721 33.333 0.00 0.00 0.00 3.56
2364 2485 1.209261 TCGACATGCCAGCCTCAAATA 59.791 47.619 0.00 0.00 0.00 1.40
2623 2744 1.822990 GTCTGTAGGAACCGGACATGA 59.177 52.381 9.46 0.00 31.68 3.07
2782 2903 1.845143 AGAGCCAGGATGAGCAGATTT 59.155 47.619 0.00 0.00 39.69 2.17
3194 3543 5.822132 AGACCAGATGGGATTCTGAATAG 57.178 43.478 2.28 0.00 44.88 1.73
3710 4330 2.841881 AGCCCCTAACGATACCTGAAAA 59.158 45.455 0.00 0.00 0.00 2.29
3867 4529 8.423906 TGAGGAATATAGGTCAACTTAGATCC 57.576 38.462 0.00 0.00 0.00 3.36
4204 4918 0.818445 CTCCATGCACATCTCCCTGC 60.818 60.000 0.00 0.00 0.00 4.85
4408 5234 5.394663 CCACACTATGGGTTCTAGTGAAGAG 60.395 48.000 15.32 4.59 45.82 2.85
4666 5492 4.202111 ACATTTCTGCAAAGCCTTAACGTT 60.202 37.500 5.88 5.88 0.00 3.99
4780 5606 0.310854 CCAAGTTTTGCCGACTCACC 59.689 55.000 0.00 0.00 0.00 4.02
4825 6651 0.389817 TGAGCGTTCTCCGTCCAATG 60.390 55.000 0.00 0.00 38.58 2.82
4844 6973 1.125093 TCAGGGACACAACGGACCAT 61.125 55.000 0.00 0.00 0.00 3.55
4940 7070 4.521146 ACTTTAAGGGACATGCATCTCAG 58.479 43.478 4.27 0.00 0.00 3.35
4949 7079 2.375174 TGTGGCAGACTTTAAGGGACAT 59.625 45.455 0.00 0.00 0.00 3.06
5017 7147 4.860881 TAGGGGAGGAGGCGGCTG 62.861 72.222 19.63 0.00 0.00 4.85
5018 7148 3.635869 TTTAGGGGAGGAGGCGGCT 62.636 63.158 13.09 13.09 0.00 5.52
5019 7149 2.206182 TTTTTAGGGGAGGAGGCGGC 62.206 60.000 0.00 0.00 0.00 6.53
5020 7150 1.996086 TTTTTAGGGGAGGAGGCGG 59.004 57.895 0.00 0.00 0.00 6.13
5035 7165 2.272447 CCACCGCGTCCCCATTTTT 61.272 57.895 4.92 0.00 0.00 1.94
5036 7166 2.493273 ATCCACCGCGTCCCCATTTT 62.493 55.000 4.92 0.00 0.00 1.82
5037 7167 2.886730 GATCCACCGCGTCCCCATTT 62.887 60.000 4.92 0.00 0.00 2.32
5038 7168 3.400599 GATCCACCGCGTCCCCATT 62.401 63.158 4.92 0.00 0.00 3.16
5039 7169 3.861797 GATCCACCGCGTCCCCAT 61.862 66.667 4.92 0.00 0.00 4.00
5059 7189 1.450312 CAACCCACAGGCGAGGATC 60.450 63.158 0.00 0.00 36.11 3.36
5060 7190 2.671070 CAACCCACAGGCGAGGAT 59.329 61.111 0.00 0.00 36.11 3.24
5061 7191 3.636231 CCAACCCACAGGCGAGGA 61.636 66.667 0.00 0.00 36.11 3.71
5067 7197 0.542702 AAATGGAGCCAACCCACAGG 60.543 55.000 0.00 0.00 36.36 4.00
5068 7198 0.890683 GAAATGGAGCCAACCCACAG 59.109 55.000 0.00 0.00 36.36 3.66
5069 7199 0.187117 TGAAATGGAGCCAACCCACA 59.813 50.000 0.00 0.00 36.36 4.17
5070 7200 0.603065 GTGAAATGGAGCCAACCCAC 59.397 55.000 0.00 0.00 36.36 4.61
5071 7201 0.893270 CGTGAAATGGAGCCAACCCA 60.893 55.000 0.00 0.00 38.19 4.51
5072 7202 0.893727 ACGTGAAATGGAGCCAACCC 60.894 55.000 0.00 0.00 0.00 4.11
5073 7203 1.816074 TACGTGAAATGGAGCCAACC 58.184 50.000 0.00 0.00 0.00 3.77
5074 7204 5.751243 AATATACGTGAAATGGAGCCAAC 57.249 39.130 0.00 0.00 0.00 3.77
5077 7207 6.791303 TCAAAAATATACGTGAAATGGAGCC 58.209 36.000 0.00 0.00 0.00 4.70
5093 7223 9.757227 CACAGACCCTAACAAAATTCAAAAATA 57.243 29.630 0.00 0.00 0.00 1.40
5100 7230 6.381801 CATGACACAGACCCTAACAAAATTC 58.618 40.000 0.00 0.00 0.00 2.17
5101 7231 5.278957 GCATGACACAGACCCTAACAAAATT 60.279 40.000 0.00 0.00 0.00 1.82
5104 7234 3.146066 GCATGACACAGACCCTAACAAA 58.854 45.455 0.00 0.00 0.00 2.83
5111 7241 0.610174 TCTGAGCATGACACAGACCC 59.390 55.000 11.21 0.00 40.55 4.46
5112 7242 2.462456 TTCTGAGCATGACACAGACC 57.538 50.000 13.66 0.00 44.40 3.85
5113 7243 3.397482 ACTTTCTGAGCATGACACAGAC 58.603 45.455 13.66 0.00 44.40 3.51
5115 7245 2.411069 CGACTTTCTGAGCATGACACAG 59.589 50.000 0.00 2.57 38.24 3.66
5116 7246 2.035832 TCGACTTTCTGAGCATGACACA 59.964 45.455 0.00 0.00 0.00 3.72
5117 7247 2.665537 CTCGACTTTCTGAGCATGACAC 59.334 50.000 0.00 0.00 0.00 3.67
5118 7248 2.558359 TCTCGACTTTCTGAGCATGACA 59.442 45.455 0.00 0.00 32.20 3.58
5119 7249 2.920490 GTCTCGACTTTCTGAGCATGAC 59.080 50.000 0.00 0.00 32.20 3.06
5120 7250 2.414691 CGTCTCGACTTTCTGAGCATGA 60.415 50.000 0.00 0.00 32.20 3.07
5121 7251 1.916651 CGTCTCGACTTTCTGAGCATG 59.083 52.381 0.00 0.00 32.20 4.06
5122 7252 1.813178 TCGTCTCGACTTTCTGAGCAT 59.187 47.619 0.00 0.00 32.20 3.79
5123 7253 1.197949 CTCGTCTCGACTTTCTGAGCA 59.802 52.381 0.00 0.00 32.20 4.26
5124 7254 1.466697 CCTCGTCTCGACTTTCTGAGC 60.467 57.143 0.00 0.00 32.20 4.26
5125 7255 1.807742 ACCTCGTCTCGACTTTCTGAG 59.192 52.381 0.00 0.00 0.00 3.35
5127 7257 1.401670 CCACCTCGTCTCGACTTTCTG 60.402 57.143 0.00 0.00 0.00 3.02
5128 7258 0.882474 CCACCTCGTCTCGACTTTCT 59.118 55.000 0.00 0.00 0.00 2.52
5129 7259 0.733223 GCCACCTCGTCTCGACTTTC 60.733 60.000 0.00 0.00 0.00 2.62
5130 7260 1.179814 AGCCACCTCGTCTCGACTTT 61.180 55.000 0.00 0.00 0.00 2.66
5131 7261 0.322277 TAGCCACCTCGTCTCGACTT 60.322 55.000 0.00 0.00 0.00 3.01
5132 7262 0.107116 ATAGCCACCTCGTCTCGACT 60.107 55.000 0.00 0.00 0.00 4.18
5134 7264 0.180642 AGATAGCCACCTCGTCTCGA 59.819 55.000 0.00 0.00 0.00 4.04
5135 7265 0.309302 CAGATAGCCACCTCGTCTCG 59.691 60.000 0.00 0.00 0.00 4.04
5136 7266 1.681538 TCAGATAGCCACCTCGTCTC 58.318 55.000 0.00 0.00 0.00 3.36
5137 7267 2.028130 CTTCAGATAGCCACCTCGTCT 58.972 52.381 0.00 0.00 0.00 4.18
5138 7268 2.025155 TCTTCAGATAGCCACCTCGTC 58.975 52.381 0.00 0.00 0.00 4.20
5139 7269 2.145397 TCTTCAGATAGCCACCTCGT 57.855 50.000 0.00 0.00 0.00 4.18
5140 7270 2.288702 CCATCTTCAGATAGCCACCTCG 60.289 54.545 0.00 0.00 32.63 4.63
5141 7271 2.968574 TCCATCTTCAGATAGCCACCTC 59.031 50.000 0.00 0.00 32.63 3.85
5142 7272 3.051940 TCCATCTTCAGATAGCCACCT 57.948 47.619 0.00 0.00 32.63 4.00
5143 7273 3.845781 TTCCATCTTCAGATAGCCACC 57.154 47.619 0.00 0.00 32.63 4.61
5144 7274 5.936956 CCTTATTCCATCTTCAGATAGCCAC 59.063 44.000 0.00 0.00 32.63 5.01
5146 7276 4.940654 GCCTTATTCCATCTTCAGATAGCC 59.059 45.833 0.00 0.00 32.63 3.93
5147 7277 5.803552 AGCCTTATTCCATCTTCAGATAGC 58.196 41.667 0.00 0.00 32.63 2.97
5149 7279 7.256475 GGAAGAGCCTTATTCCATCTTCAGATA 60.256 40.741 13.46 0.00 44.89 1.98
5151 7281 5.163258 GGAAGAGCCTTATTCCATCTTCAGA 60.163 44.000 13.46 0.00 44.89 3.27
5152 7282 5.062528 GGAAGAGCCTTATTCCATCTTCAG 58.937 45.833 13.46 0.00 44.89 3.02
5153 7283 4.141390 GGGAAGAGCCTTATTCCATCTTCA 60.141 45.833 13.46 0.00 44.75 3.02
5154 7284 4.141390 TGGGAAGAGCCTTATTCCATCTTC 60.141 45.833 10.69 4.98 44.75 2.87
5156 7286 3.137360 GTGGGAAGAGCCTTATTCCATCT 59.863 47.826 10.69 0.00 44.75 2.90
5157 7287 3.481453 GTGGGAAGAGCCTTATTCCATC 58.519 50.000 10.69 1.66 44.75 3.51
5158 7288 2.175715 GGTGGGAAGAGCCTTATTCCAT 59.824 50.000 10.69 0.00 44.75 3.41
5159 7289 1.564348 GGTGGGAAGAGCCTTATTCCA 59.436 52.381 10.69 2.32 44.75 3.53
5160 7290 1.847088 AGGTGGGAAGAGCCTTATTCC 59.153 52.381 1.93 1.93 42.71 3.01
5161 7291 3.712218 ACTAGGTGGGAAGAGCCTTATTC 59.288 47.826 0.00 0.00 36.66 1.75
5162 7292 3.712218 GACTAGGTGGGAAGAGCCTTATT 59.288 47.826 0.00 0.00 36.66 1.40
5164 7294 2.626149 GGACTAGGTGGGAAGAGCCTTA 60.626 54.545 0.00 0.00 36.66 2.69
5167 7297 1.338890 GGGACTAGGTGGGAAGAGCC 61.339 65.000 0.00 0.00 0.00 4.70
5168 7298 1.338890 GGGGACTAGGTGGGAAGAGC 61.339 65.000 0.00 0.00 0.00 4.09
5169 7299 0.042731 TGGGGACTAGGTGGGAAGAG 59.957 60.000 0.00 0.00 0.00 2.85
5170 7300 0.252558 GTGGGGACTAGGTGGGAAGA 60.253 60.000 0.00 0.00 0.00 2.87
5171 7301 0.252742 AGTGGGGACTAGGTGGGAAG 60.253 60.000 0.00 0.00 0.00 3.46
5172 7302 0.195096 AAGTGGGGACTAGGTGGGAA 59.805 55.000 0.00 0.00 0.00 3.97
5173 7303 0.252558 GAAGTGGGGACTAGGTGGGA 60.253 60.000 0.00 0.00 0.00 4.37
5174 7304 1.614241 CGAAGTGGGGACTAGGTGGG 61.614 65.000 0.00 0.00 0.00 4.61
5175 7305 1.614241 CCGAAGTGGGGACTAGGTGG 61.614 65.000 0.00 0.00 0.00 4.61
5176 7306 0.903454 ACCGAAGTGGGGACTAGGTG 60.903 60.000 0.00 0.00 44.64 4.00
5178 7308 4.455366 ACCGAAGTGGGGACTAGG 57.545 61.111 0.00 0.00 44.64 3.02
5187 7317 1.732259 GTTAGATGCACCACCGAAGTG 59.268 52.381 0.00 0.00 44.12 3.16
5188 7318 1.346395 TGTTAGATGCACCACCGAAGT 59.654 47.619 0.00 0.00 0.00 3.01
5189 7319 2.093306 TGTTAGATGCACCACCGAAG 57.907 50.000 0.00 0.00 0.00 3.79
5193 7323 1.933853 GACGATGTTAGATGCACCACC 59.066 52.381 0.00 0.00 0.00 4.61
5194 7324 1.588404 CGACGATGTTAGATGCACCAC 59.412 52.381 0.00 0.00 0.00 4.16
5195 7325 1.470805 CCGACGATGTTAGATGCACCA 60.471 52.381 0.00 0.00 0.00 4.17
5196 7326 1.209128 CCGACGATGTTAGATGCACC 58.791 55.000 0.00 0.00 0.00 5.01
5197 7327 1.588404 CACCGACGATGTTAGATGCAC 59.412 52.381 0.00 0.00 0.00 4.57
5198 7328 1.470805 CCACCGACGATGTTAGATGCA 60.471 52.381 0.00 0.00 0.00 3.96
5199 7329 1.209128 CCACCGACGATGTTAGATGC 58.791 55.000 0.00 0.00 0.00 3.91
5200 7330 1.852942 CCCACCGACGATGTTAGATG 58.147 55.000 0.00 0.00 0.00 2.90
5201 7331 0.104304 GCCCACCGACGATGTTAGAT 59.896 55.000 0.00 0.00 0.00 1.98
5203 7333 1.876714 CGCCCACCGACGATGTTAG 60.877 63.158 0.00 0.00 40.02 2.34
5204 7334 2.182284 CGCCCACCGACGATGTTA 59.818 61.111 0.00 0.00 40.02 2.41
5205 7335 3.998672 ACGCCCACCGACGATGTT 61.999 61.111 0.00 0.00 41.02 2.71
5207 7337 4.735132 ACACGCCCACCGACGATG 62.735 66.667 0.00 0.00 41.02 3.84
5215 7345 4.626081 ACAGCTCCACACGCCCAC 62.626 66.667 0.00 0.00 0.00 4.61
5217 7347 4.626081 ACACAGCTCCACACGCCC 62.626 66.667 0.00 0.00 0.00 6.13
5218 7348 2.996168 AAGACACAGCTCCACACGCC 62.996 60.000 0.00 0.00 0.00 5.68
5219 7349 1.560860 GAAGACACAGCTCCACACGC 61.561 60.000 0.00 0.00 0.00 5.34
5220 7350 1.278172 CGAAGACACAGCTCCACACG 61.278 60.000 0.00 0.00 0.00 4.49
5221 7351 0.946221 CCGAAGACACAGCTCCACAC 60.946 60.000 0.00 0.00 0.00 3.82
5222 7352 1.367471 CCGAAGACACAGCTCCACA 59.633 57.895 0.00 0.00 0.00 4.17
5223 7353 0.946221 CACCGAAGACACAGCTCCAC 60.946 60.000 0.00 0.00 0.00 4.02
5224 7354 1.367471 CACCGAAGACACAGCTCCA 59.633 57.895 0.00 0.00 0.00 3.86
5225 7355 1.374758 CCACCGAAGACACAGCTCC 60.375 63.158 0.00 0.00 0.00 4.70
5226 7356 0.247736 ATCCACCGAAGACACAGCTC 59.752 55.000 0.00 0.00 0.00 4.09
5227 7357 1.557099 TATCCACCGAAGACACAGCT 58.443 50.000 0.00 0.00 0.00 4.24
5228 7358 2.205074 CATATCCACCGAAGACACAGC 58.795 52.381 0.00 0.00 0.00 4.40
5229 7359 2.205074 GCATATCCACCGAAGACACAG 58.795 52.381 0.00 0.00 0.00 3.66
5232 7362 1.496060 AGGCATATCCACCGAAGACA 58.504 50.000 0.00 0.00 37.29 3.41
5233 7363 2.614057 CAAAGGCATATCCACCGAAGAC 59.386 50.000 0.00 0.00 37.29 3.01
5234 7364 2.421388 CCAAAGGCATATCCACCGAAGA 60.421 50.000 0.00 0.00 37.29 2.87
5235 7365 1.949525 CCAAAGGCATATCCACCGAAG 59.050 52.381 0.00 0.00 37.29 3.79
5236 7366 1.283613 ACCAAAGGCATATCCACCGAA 59.716 47.619 0.00 0.00 37.29 4.30
5237 7367 0.916086 ACCAAAGGCATATCCACCGA 59.084 50.000 0.00 0.00 37.29 4.69
5238 7368 1.024271 CACCAAAGGCATATCCACCG 58.976 55.000 0.00 0.00 37.29 4.94
5241 7371 3.686227 AATCCACCAAAGGCATATCCA 57.314 42.857 0.00 0.00 37.29 3.41
5243 7373 5.049405 CGAGTAAATCCACCAAAGGCATATC 60.049 44.000 0.00 0.00 0.00 1.63
5244 7374 4.821805 CGAGTAAATCCACCAAAGGCATAT 59.178 41.667 0.00 0.00 0.00 1.78
5245 7375 4.196193 CGAGTAAATCCACCAAAGGCATA 58.804 43.478 0.00 0.00 0.00 3.14
5247 7377 2.432444 CGAGTAAATCCACCAAAGGCA 58.568 47.619 0.00 0.00 0.00 4.75
5248 7378 1.743394 CCGAGTAAATCCACCAAAGGC 59.257 52.381 0.00 0.00 0.00 4.35
5249 7379 3.343941 TCCGAGTAAATCCACCAAAGG 57.656 47.619 0.00 0.00 0.00 3.11
5251 7381 4.837093 AGATCCGAGTAAATCCACCAAA 57.163 40.909 0.00 0.00 0.00 3.28
5253 7383 5.278808 CGAATAGATCCGAGTAAATCCACCA 60.279 44.000 0.00 0.00 0.00 4.17
5254 7384 5.162075 CGAATAGATCCGAGTAAATCCACC 58.838 45.833 0.00 0.00 0.00 4.61
5255 7385 5.770417 ACGAATAGATCCGAGTAAATCCAC 58.230 41.667 0.00 0.00 0.00 4.02
5256 7386 5.533528 TGACGAATAGATCCGAGTAAATCCA 59.466 40.000 0.00 0.00 0.00 3.41
5257 7387 6.010294 TGACGAATAGATCCGAGTAAATCC 57.990 41.667 0.00 0.00 0.00 3.01
5258 7388 7.007546 CGAATGACGAATAGATCCGAGTAAATC 59.992 40.741 0.00 0.00 45.77 2.17
5259 7389 6.802348 CGAATGACGAATAGATCCGAGTAAAT 59.198 38.462 0.00 0.00 45.77 1.40
5261 7391 5.237996 ACGAATGACGAATAGATCCGAGTAA 59.762 40.000 0.00 0.00 45.77 2.24
5262 7392 4.753610 ACGAATGACGAATAGATCCGAGTA 59.246 41.667 0.00 0.00 45.77 2.59
5265 7395 3.813724 AGACGAATGACGAATAGATCCGA 59.186 43.478 0.00 0.00 45.77 4.55
5266 7396 4.148563 AGACGAATGACGAATAGATCCG 57.851 45.455 0.00 0.00 45.77 4.18
5267 7397 6.613233 ACATAGACGAATGACGAATAGATCC 58.387 40.000 0.00 0.00 45.77 3.36
5268 7398 8.420945 CAAACATAGACGAATGACGAATAGATC 58.579 37.037 0.00 0.00 45.77 2.75
5269 7399 7.921214 ACAAACATAGACGAATGACGAATAGAT 59.079 33.333 0.00 0.00 45.77 1.98
5270 7400 7.220108 CACAAACATAGACGAATGACGAATAGA 59.780 37.037 0.00 0.00 45.77 1.98
5272 7402 6.809689 ACACAAACATAGACGAATGACGAATA 59.190 34.615 0.00 0.00 45.77 1.75
5273 7403 5.637810 ACACAAACATAGACGAATGACGAAT 59.362 36.000 0.00 0.00 45.77 3.34
5274 7404 4.986034 ACACAAACATAGACGAATGACGAA 59.014 37.500 0.00 0.00 45.77 3.85
5277 7407 7.757097 AGATACACAAACATAGACGAATGAC 57.243 36.000 0.00 0.00 0.00 3.06
5278 7408 8.032451 TGAAGATACACAAACATAGACGAATGA 58.968 33.333 0.00 0.00 0.00 2.57
5280 7410 7.492669 CCTGAAGATACACAAACATAGACGAAT 59.507 37.037 0.00 0.00 0.00 3.34
5281 7411 6.811665 CCTGAAGATACACAAACATAGACGAA 59.188 38.462 0.00 0.00 0.00 3.85
5282 7412 6.071560 ACCTGAAGATACACAAACATAGACGA 60.072 38.462 0.00 0.00 0.00 4.20
5284 7414 7.602644 TCAACCTGAAGATACACAAACATAGAC 59.397 37.037 0.00 0.00 0.00 2.59
5285 7415 7.676004 TCAACCTGAAGATACACAAACATAGA 58.324 34.615 0.00 0.00 0.00 1.98
5286 7416 7.905604 TCAACCTGAAGATACACAAACATAG 57.094 36.000 0.00 0.00 0.00 2.23
5287 7417 8.862325 ATTCAACCTGAAGATACACAAACATA 57.138 30.769 0.00 0.00 40.05 2.29
5288 7418 7.765695 ATTCAACCTGAAGATACACAAACAT 57.234 32.000 0.00 0.00 40.05 2.71
5289 7419 7.502226 AGAATTCAACCTGAAGATACACAAACA 59.498 33.333 8.44 0.00 40.05 2.83
5292 7422 8.099364 GAAGAATTCAACCTGAAGATACACAA 57.901 34.615 8.44 0.00 46.62 3.33
5293 7423 7.672983 GAAGAATTCAACCTGAAGATACACA 57.327 36.000 8.44 0.00 46.62 3.72
5306 7436 6.426025 AGTAACGTAGGTTGGAAGAATTCAAC 59.574 38.462 10.99 3.78 41.43 3.18
5307 7437 6.527423 AGTAACGTAGGTTGGAAGAATTCAA 58.473 36.000 10.99 0.00 41.43 2.69
5311 7441 5.997384 AGAGTAACGTAGGTTGGAAGAAT 57.003 39.130 10.99 0.00 36.90 2.40
5312 7442 5.302568 TGAAGAGTAACGTAGGTTGGAAGAA 59.697 40.000 10.99 0.00 36.90 2.52
5313 7443 4.828939 TGAAGAGTAACGTAGGTTGGAAGA 59.171 41.667 10.99 0.00 36.90 2.87
5315 7445 5.620654 CGATGAAGAGTAACGTAGGTTGGAA 60.621 44.000 10.99 0.00 36.90 3.53
5316 7446 4.142534 CGATGAAGAGTAACGTAGGTTGGA 60.143 45.833 10.99 0.00 36.90 3.53
5317 7447 4.103357 CGATGAAGAGTAACGTAGGTTGG 58.897 47.826 10.99 0.00 36.90 3.77
5319 7449 3.428589 GCCGATGAAGAGTAACGTAGGTT 60.429 47.826 6.03 6.03 40.20 3.50
5320 7450 2.098770 GCCGATGAAGAGTAACGTAGGT 59.901 50.000 0.00 0.00 0.00 3.08
5321 7451 2.728922 GCCGATGAAGAGTAACGTAGG 58.271 52.381 0.00 0.00 0.00 3.18
5322 7452 2.373269 CGCCGATGAAGAGTAACGTAG 58.627 52.381 0.00 0.00 0.00 3.51
5323 7453 1.064505 CCGCCGATGAAGAGTAACGTA 59.935 52.381 0.00 0.00 0.00 3.57
5324 7454 0.179145 CCGCCGATGAAGAGTAACGT 60.179 55.000 0.00 0.00 0.00 3.99
5325 7455 1.480219 GCCGCCGATGAAGAGTAACG 61.480 60.000 0.00 0.00 0.00 3.18
5326 7456 1.480219 CGCCGCCGATGAAGAGTAAC 61.480 60.000 0.00 0.00 36.29 2.50
5327 7457 1.226859 CGCCGCCGATGAAGAGTAA 60.227 57.895 0.00 0.00 36.29 2.24
5329 7459 4.514577 CCGCCGCCGATGAAGAGT 62.515 66.667 0.00 0.00 36.29 3.24
5330 7460 4.514577 ACCGCCGCCGATGAAGAG 62.515 66.667 0.00 0.00 36.29 2.85
5331 7461 4.077184 AACCGCCGCCGATGAAGA 62.077 61.111 0.00 0.00 36.29 2.87
5332 7462 3.864686 CAACCGCCGCCGATGAAG 61.865 66.667 0.00 0.00 36.29 3.02
5340 7470 4.389576 CAGAACAGCAACCGCCGC 62.390 66.667 0.00 0.00 39.83 6.53
5341 7471 3.726517 CCAGAACAGCAACCGCCG 61.727 66.667 0.00 0.00 39.83 6.46
5342 7472 2.594592 ACCAGAACAGCAACCGCC 60.595 61.111 0.00 0.00 39.83 6.13
5343 7473 2.186826 ACACCAGAACAGCAACCGC 61.187 57.895 0.00 0.00 38.99 5.68
5344 7474 1.095228 ACACACCAGAACAGCAACCG 61.095 55.000 0.00 0.00 0.00 4.44
5345 7475 1.102978 AACACACCAGAACAGCAACC 58.897 50.000 0.00 0.00 0.00 3.77
5346 7476 1.202290 CCAACACACCAGAACAGCAAC 60.202 52.381 0.00 0.00 0.00 4.17
5347 7477 1.102154 CCAACACACCAGAACAGCAA 58.898 50.000 0.00 0.00 0.00 3.91
5348 7478 0.034574 ACCAACACACCAGAACAGCA 60.035 50.000 0.00 0.00 0.00 4.41
5349 7479 0.663153 GACCAACACACCAGAACAGC 59.337 55.000 0.00 0.00 0.00 4.40
5350 7480 1.134098 AGGACCAACACACCAGAACAG 60.134 52.381 0.00 0.00 0.00 3.16
5352 7482 2.922740 TAGGACCAACACACCAGAAC 57.077 50.000 0.00 0.00 0.00 3.01
5353 7483 2.976185 TCATAGGACCAACACACCAGAA 59.024 45.455 0.00 0.00 0.00 3.02
5354 7484 2.567169 CTCATAGGACCAACACACCAGA 59.433 50.000 0.00 0.00 0.00 3.86
5355 7485 2.355108 CCTCATAGGACCAACACACCAG 60.355 54.545 0.00 0.00 37.67 4.00
5356 7486 1.628340 CCTCATAGGACCAACACACCA 59.372 52.381 0.00 0.00 37.67 4.17
5357 7487 1.679032 GCCTCATAGGACCAACACACC 60.679 57.143 0.00 0.00 37.67 4.16
5358 7488 1.679032 GGCCTCATAGGACCAACACAC 60.679 57.143 0.00 0.00 37.46 3.82
5360 7490 3.478540 GGCCTCATAGGACCAACAC 57.521 57.895 0.00 0.00 37.46 3.32
5366 7496 2.634940 TCATGCTAAGGCCTCATAGGAC 59.365 50.000 5.23 0.00 46.64 3.85
5367 7497 2.634940 GTCATGCTAAGGCCTCATAGGA 59.365 50.000 5.23 6.98 37.67 2.94
5368 7498 2.611473 CGTCATGCTAAGGCCTCATAGG 60.611 54.545 5.23 0.00 38.80 2.57
5369 7499 2.297315 TCGTCATGCTAAGGCCTCATAG 59.703 50.000 5.23 6.39 37.74 2.23
5371 7501 1.123077 TCGTCATGCTAAGGCCTCAT 58.877 50.000 5.23 1.78 37.74 2.90
5372 7502 0.175760 GTCGTCATGCTAAGGCCTCA 59.824 55.000 5.23 0.00 37.74 3.86
5373 7503 0.461961 AGTCGTCATGCTAAGGCCTC 59.538 55.000 5.23 0.00 37.74 4.70
5374 7504 0.905357 AAGTCGTCATGCTAAGGCCT 59.095 50.000 0.00 0.00 37.74 5.19
5375 7505 1.666189 GAAAGTCGTCATGCTAAGGCC 59.334 52.381 0.00 0.00 37.74 5.19
5376 7506 1.666189 GGAAAGTCGTCATGCTAAGGC 59.334 52.381 0.00 0.00 39.26 4.35
5377 7507 1.927174 CGGAAAGTCGTCATGCTAAGG 59.073 52.381 0.00 0.00 0.00 2.69
5378 7508 2.599082 GTCGGAAAGTCGTCATGCTAAG 59.401 50.000 0.00 0.00 0.00 2.18
5380 7510 1.816835 AGTCGGAAAGTCGTCATGCTA 59.183 47.619 0.00 0.00 0.00 3.49
5381 7511 0.603569 AGTCGGAAAGTCGTCATGCT 59.396 50.000 0.00 0.00 0.00 3.79
5382 7512 0.716108 CAGTCGGAAAGTCGTCATGC 59.284 55.000 0.00 0.00 0.00 4.06
5383 7513 1.986378 GACAGTCGGAAAGTCGTCATG 59.014 52.381 0.00 0.00 0.00 3.07
5384 7514 1.887198 AGACAGTCGGAAAGTCGTCAT 59.113 47.619 0.00 0.00 37.36 3.06
5385 7515 1.315690 AGACAGTCGGAAAGTCGTCA 58.684 50.000 0.00 0.00 37.36 4.35
5387 7517 2.502295 AGTAGACAGTCGGAAAGTCGT 58.498 47.619 0.00 0.00 37.36 4.34
5389 7519 5.152804 GTTGTAGTAGACAGTCGGAAAGTC 58.847 45.833 0.00 3.60 39.88 3.01
5390 7520 4.581824 TGTTGTAGTAGACAGTCGGAAAGT 59.418 41.667 0.00 0.00 39.88 2.66
5397 7603 6.128526 GGCAAAATCTGTTGTAGTAGACAGTC 60.129 42.308 11.43 0.00 42.90 3.51
5401 7607 4.092968 CGGGCAAAATCTGTTGTAGTAGAC 59.907 45.833 0.00 0.00 0.00 2.59
5403 7609 3.374058 CCGGGCAAAATCTGTTGTAGTAG 59.626 47.826 0.00 0.00 0.00 2.57
5404 7610 3.340034 CCGGGCAAAATCTGTTGTAGTA 58.660 45.455 0.00 0.00 0.00 1.82
5409 7615 0.109132 GAGCCGGGCAAAATCTGTTG 60.109 55.000 23.09 0.00 0.00 3.33
5412 7618 2.764314 CGGAGCCGGGCAAAATCTG 61.764 63.158 23.09 11.07 35.56 2.90
5423 7629 2.125512 CTTCCTTCACCGGAGCCG 60.126 66.667 9.46 1.06 33.89 5.52
5424 7630 1.219393 CTCTTCCTTCACCGGAGCC 59.781 63.158 9.46 0.00 33.89 4.70
5425 7631 0.390472 CACTCTTCCTTCACCGGAGC 60.390 60.000 9.46 0.00 33.89 4.70
5426 7632 1.257743 TCACTCTTCCTTCACCGGAG 58.742 55.000 9.46 0.00 33.89 4.63
5427 7633 1.550524 CATCACTCTTCCTTCACCGGA 59.449 52.381 9.46 0.00 0.00 5.14
5430 7636 2.611518 CGTCATCACTCTTCCTTCACC 58.388 52.381 0.00 0.00 0.00 4.02
5431 7637 2.028930 ACCGTCATCACTCTTCCTTCAC 60.029 50.000 0.00 0.00 0.00 3.18
5432 7638 2.029020 CACCGTCATCACTCTTCCTTCA 60.029 50.000 0.00 0.00 0.00 3.02
5433 7639 2.611518 CACCGTCATCACTCTTCCTTC 58.388 52.381 0.00 0.00 0.00 3.46
5434 7640 1.276421 CCACCGTCATCACTCTTCCTT 59.724 52.381 0.00 0.00 0.00 3.36
5435 7641 0.898320 CCACCGTCATCACTCTTCCT 59.102 55.000 0.00 0.00 0.00 3.36
5437 7643 1.078759 CGCCACCGTCATCACTCTTC 61.079 60.000 0.00 0.00 0.00 2.87
5438 7644 1.079819 CGCCACCGTCATCACTCTT 60.080 57.895 0.00 0.00 0.00 2.85
5439 7645 2.573869 CGCCACCGTCATCACTCT 59.426 61.111 0.00 0.00 0.00 3.24
5440 7646 3.188786 GCGCCACCGTCATCACTC 61.189 66.667 0.00 0.00 36.67 3.51
5456 7662 1.355066 CTGAAGGAAGCCGAAGACGC 61.355 60.000 0.00 0.00 38.29 5.19
5458 7664 1.433534 CACTGAAGGAAGCCGAAGAC 58.566 55.000 0.00 0.00 0.00 3.01
5459 7665 0.320771 GCACTGAAGGAAGCCGAAGA 60.321 55.000 0.00 0.00 0.00 2.87
5460 7666 0.321122 AGCACTGAAGGAAGCCGAAG 60.321 55.000 0.00 0.00 0.00 3.79
5462 7668 0.603707 CAAGCACTGAAGGAAGCCGA 60.604 55.000 0.00 0.00 0.00 5.54
5463 7669 0.886490 ACAAGCACTGAAGGAAGCCG 60.886 55.000 0.00 0.00 0.00 5.52
5464 7670 2.079925 CTACAAGCACTGAAGGAAGCC 58.920 52.381 0.00 0.00 0.00 4.35
5465 7671 2.739379 GACTACAAGCACTGAAGGAAGC 59.261 50.000 0.00 0.00 0.00 3.86
5469 7675 1.071605 GCGACTACAAGCACTGAAGG 58.928 55.000 0.00 0.00 0.00 3.46
5472 7678 0.319555 GTGGCGACTACAAGCACTGA 60.320 55.000 0.00 0.00 34.54 3.41
5473 7679 0.319900 AGTGGCGACTACAAGCACTG 60.320 55.000 0.00 0.00 34.54 3.66
5474 7680 1.202582 CTAGTGGCGACTACAAGCACT 59.797 52.381 4.24 0.00 33.21 4.40
5475 7681 1.067776 ACTAGTGGCGACTACAAGCAC 60.068 52.381 4.24 0.00 33.21 4.40
5476 7682 1.254026 ACTAGTGGCGACTACAAGCA 58.746 50.000 4.24 0.00 33.21 3.91
5478 7684 2.607187 CCAACTAGTGGCGACTACAAG 58.393 52.381 4.24 0.00 41.72 3.16


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.