Multiple sequence alignment - TraesCS2B01G291500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G291500 chr2B 100.000 3568 0 0 1 3568 405261324 405264891 0.000000e+00 6589.0
1 TraesCS2B01G291500 chr2D 95.381 1927 62 19 852 2774 337922936 337924839 0.000000e+00 3040.0
2 TraesCS2B01G291500 chr2D 84.615 338 28 11 509 825 337922621 337922955 7.440000e-82 315.0
3 TraesCS2B01G291500 chr2D 81.818 286 29 10 156 441 337922196 337922458 6.000000e-53 219.0
4 TraesCS2B01G291500 chr2A 97.321 1008 27 0 1561 2568 448153688 448154695 0.000000e+00 1712.0
5 TraesCS2B01G291500 chr2A 90.601 766 49 16 852 1609 448152947 448153697 0.000000e+00 994.0
6 TraesCS2B01G291500 chr2A 78.065 775 146 22 1688 2450 448294184 448293422 5.390000e-128 468.0
7 TraesCS2B01G291500 chr2A 85.588 340 16 16 510 825 448152636 448152966 3.440000e-85 326.0
8 TraesCS2B01G291500 chr2A 73.474 803 170 32 1693 2466 13004029 13003241 2.730000e-66 263.0
9 TraesCS2B01G291500 chr2A 90.071 141 14 0 157 297 448151496 448151636 2.190000e-42 183.0
10 TraesCS2B01G291500 chr1A 82.244 1560 246 24 1022 2560 53997351 53995802 0.000000e+00 1317.0
11 TraesCS2B01G291500 chr1A 92.405 79 3 1 3490 3568 202066798 202066723 3.770000e-20 110.0
12 TraesCS2B01G291500 chr1A 90.789 76 0 2 3490 3565 202065911 202065843 1.050000e-15 95.3
13 TraesCS2B01G291500 chr1B 80.220 1547 263 33 1022 2556 90544306 90542791 0.000000e+00 1122.0
14 TraesCS2B01G291500 chr5A 79.079 1520 290 24 1017 2528 619359815 619361314 0.000000e+00 1020.0
15 TraesCS2B01G291500 chr5A 89.499 619 60 5 2781 3397 492629735 492629120 0.000000e+00 778.0
16 TraesCS2B01G291500 chr5D 91.185 658 52 6 2774 3428 410537843 410538497 0.000000e+00 889.0
17 TraesCS2B01G291500 chr5D 90.161 620 53 8 2781 3396 61485444 61484829 0.000000e+00 800.0
18 TraesCS2B01G291500 chr1D 89.474 665 59 6 2773 3433 8279260 8278603 0.000000e+00 830.0
19 TraesCS2B01G291500 chr1D 94.737 76 1 1 3490 3565 148620915 148620843 8.090000e-22 115.0
20 TraesCS2B01G291500 chr1D 92.405 79 3 1 3490 3568 148621698 148621623 3.770000e-20 110.0
21 TraesCS2B01G291500 chr7D 90.097 616 59 2 2781 3394 624811364 624811979 0.000000e+00 798.0
22 TraesCS2B01G291500 chr7D 100.000 49 0 0 3489 3537 632549253 632549301 1.360000e-14 91.6
23 TraesCS2B01G291500 chr3D 90.264 606 55 4 2773 3375 581095639 581096243 0.000000e+00 789.0
24 TraesCS2B01G291500 chr3D 89.516 620 55 10 2782 3396 401011728 401012342 0.000000e+00 776.0
25 TraesCS2B01G291500 chr4A 89.499 619 61 3 2773 3387 162419791 162420409 0.000000e+00 780.0
26 TraesCS2B01G291500 chr4A 89.499 619 60 5 2781 3397 598588967 598589582 0.000000e+00 778.0
27 TraesCS2B01G291500 chrUn 78.952 1183 208 31 1385 2556 427096637 427097789 0.000000e+00 767.0
28 TraesCS2B01G291500 chr6B 81.719 919 148 18 1612 2520 674327781 674328689 0.000000e+00 749.0
29 TraesCS2B01G291500 chr6B 80.903 487 87 6 1023 1506 674327290 674327773 2.600000e-101 379.0
30 TraesCS2B01G291500 chr6D 81.590 918 151 16 1612 2520 446103372 446104280 0.000000e+00 743.0
31 TraesCS2B01G291500 chr6D 81.148 488 80 11 1025 1506 446102883 446103364 7.230000e-102 381.0
32 TraesCS2B01G291500 chr6A 81.944 864 140 14 1615 2470 592817921 592817066 0.000000e+00 717.0
33 TraesCS2B01G291500 chr6A 80.853 914 159 13 1615 2520 592813745 592812840 0.000000e+00 704.0
34 TraesCS2B01G291500 chr6A 79.839 496 88 11 1023 1512 592818415 592817926 5.670000e-93 351.0
35 TraesCS2B01G291500 chr5B 80.396 505 92 7 1017 1517 611868530 611869031 9.350000e-101 377.0
36 TraesCS2B01G291500 chr4B 94.937 79 1 1 3490 3568 235361662 235361587 1.740000e-23 121.0
37 TraesCS2B01G291500 chr4B 93.671 79 2 1 3490 3568 235374937 235374862 8.090000e-22 115.0
38 TraesCS2B01G291500 chr3A 93.671 79 2 1 3490 3568 673910853 673910778 8.090000e-22 115.0
39 TraesCS2B01G291500 chr3A 92.405 79 3 1 3490 3568 673915314 673915239 3.770000e-20 110.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G291500 chr2B 405261324 405264891 3567 False 6589.000000 6589 100.000000 1 3568 1 chr2B.!!$F1 3567
1 TraesCS2B01G291500 chr2D 337922196 337924839 2643 False 1191.333333 3040 87.271333 156 2774 3 chr2D.!!$F1 2618
2 TraesCS2B01G291500 chr2A 448151496 448154695 3199 False 803.750000 1712 90.895250 157 2568 4 chr2A.!!$F1 2411
3 TraesCS2B01G291500 chr2A 448293422 448294184 762 True 468.000000 468 78.065000 1688 2450 1 chr2A.!!$R2 762
4 TraesCS2B01G291500 chr2A 13003241 13004029 788 True 263.000000 263 73.474000 1693 2466 1 chr2A.!!$R1 773
5 TraesCS2B01G291500 chr1A 53995802 53997351 1549 True 1317.000000 1317 82.244000 1022 2560 1 chr1A.!!$R1 1538
6 TraesCS2B01G291500 chr1B 90542791 90544306 1515 True 1122.000000 1122 80.220000 1022 2556 1 chr1B.!!$R1 1534
7 TraesCS2B01G291500 chr5A 619359815 619361314 1499 False 1020.000000 1020 79.079000 1017 2528 1 chr5A.!!$F1 1511
8 TraesCS2B01G291500 chr5A 492629120 492629735 615 True 778.000000 778 89.499000 2781 3397 1 chr5A.!!$R1 616
9 TraesCS2B01G291500 chr5D 410537843 410538497 654 False 889.000000 889 91.185000 2774 3428 1 chr5D.!!$F1 654
10 TraesCS2B01G291500 chr5D 61484829 61485444 615 True 800.000000 800 90.161000 2781 3396 1 chr5D.!!$R1 615
11 TraesCS2B01G291500 chr1D 8278603 8279260 657 True 830.000000 830 89.474000 2773 3433 1 chr1D.!!$R1 660
12 TraesCS2B01G291500 chr7D 624811364 624811979 615 False 798.000000 798 90.097000 2781 3394 1 chr7D.!!$F1 613
13 TraesCS2B01G291500 chr3D 581095639 581096243 604 False 789.000000 789 90.264000 2773 3375 1 chr3D.!!$F2 602
14 TraesCS2B01G291500 chr3D 401011728 401012342 614 False 776.000000 776 89.516000 2782 3396 1 chr3D.!!$F1 614
15 TraesCS2B01G291500 chr4A 162419791 162420409 618 False 780.000000 780 89.499000 2773 3387 1 chr4A.!!$F1 614
16 TraesCS2B01G291500 chr4A 598588967 598589582 615 False 778.000000 778 89.499000 2781 3397 1 chr4A.!!$F2 616
17 TraesCS2B01G291500 chrUn 427096637 427097789 1152 False 767.000000 767 78.952000 1385 2556 1 chrUn.!!$F1 1171
18 TraesCS2B01G291500 chr6B 674327290 674328689 1399 False 564.000000 749 81.311000 1023 2520 2 chr6B.!!$F1 1497
19 TraesCS2B01G291500 chr6D 446102883 446104280 1397 False 562.000000 743 81.369000 1025 2520 2 chr6D.!!$F1 1495
20 TraesCS2B01G291500 chr6A 592812840 592818415 5575 True 590.666667 717 80.878667 1023 2520 3 chr6A.!!$R1 1497
21 TraesCS2B01G291500 chr5B 611868530 611869031 501 False 377.000000 377 80.396000 1017 1517 1 chr5B.!!$F1 500

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
446 901 0.031994 AAGCAAAACGACCATGTGGC 59.968 50.0 0.00 0.00 39.32 5.01 F
469 924 0.035152 AGAACATGGCTTGCGATGGA 60.035 50.0 18.82 0.00 0.00 3.41 F
470 925 0.099436 GAACATGGCTTGCGATGGAC 59.901 55.0 18.82 10.18 0.00 4.02 F
556 1371 0.252197 GCCCACCCCACAACTACTAG 59.748 60.0 0.00 0.00 0.00 2.57 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1493 2344 0.382515 TTTGAAAGGCACGAAACCCG 59.617 50.000 0.00 0.0 45.44 5.28 R
1619 2539 1.005748 CGCCTTGTCTGTGAGCTGA 60.006 57.895 0.00 0.0 0.00 4.26 R
2408 3347 2.002977 CTCCCCTTCCATGGCCTCA 61.003 63.158 6.96 0.0 0.00 3.86 R
2623 7741 4.345288 CAACGTGCATGTGGATAATTCTG 58.655 43.478 13.39 0.0 0.00 3.02 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 4.686695 TAGGGACTGCGATGCTCT 57.313 55.556 0.00 0.00 41.52 4.09
18 19 3.821306 TAGGGACTGCGATGCTCTA 57.179 52.632 0.00 0.00 41.52 2.43
19 20 2.067365 TAGGGACTGCGATGCTCTAA 57.933 50.000 0.00 0.00 41.52 2.10
20 21 0.461961 AGGGACTGCGATGCTCTAAC 59.538 55.000 0.00 0.00 37.18 2.34
21 22 0.530870 GGGACTGCGATGCTCTAACC 60.531 60.000 0.00 0.00 0.00 2.85
22 23 0.872021 GGACTGCGATGCTCTAACCG 60.872 60.000 0.00 0.00 0.00 4.44
23 24 0.872021 GACTGCGATGCTCTAACCGG 60.872 60.000 0.00 0.00 0.00 5.28
24 25 2.202878 TGCGATGCTCTAACCGGC 60.203 61.111 0.00 0.00 0.00 6.13
25 26 2.967615 GCGATGCTCTAACCGGCC 60.968 66.667 0.00 0.00 0.00 6.13
26 27 2.658593 CGATGCTCTAACCGGCCG 60.659 66.667 21.04 21.04 0.00 6.13
27 28 2.280186 GATGCTCTAACCGGCCGG 60.280 66.667 42.17 42.17 42.03 6.13
28 29 4.547367 ATGCTCTAACCGGCCGGC 62.547 66.667 43.58 28.00 39.32 6.13
31 32 3.771160 CTCTAACCGGCCGGCTGT 61.771 66.667 43.58 30.01 39.32 4.40
32 33 4.077184 TCTAACCGGCCGGCTGTG 62.077 66.667 43.58 28.88 39.32 3.66
33 34 4.388499 CTAACCGGCCGGCTGTGT 62.388 66.667 43.58 25.72 39.32 3.72
34 35 2.996153 TAACCGGCCGGCTGTGTA 60.996 61.111 43.58 23.78 39.32 2.90
35 36 2.901051 CTAACCGGCCGGCTGTGTAG 62.901 65.000 43.58 28.91 39.32 2.74
45 46 2.832931 GCTGTGTAGCCTGTCACTG 58.167 57.895 0.00 0.00 44.33 3.66
46 47 0.671781 GCTGTGTAGCCTGTCACTGG 60.672 60.000 0.00 0.00 44.33 4.00
47 48 0.671781 CTGTGTAGCCTGTCACTGGC 60.672 60.000 17.80 17.80 46.61 4.85
52 53 4.730487 GCCTGTCACTGGCTCATT 57.270 55.556 18.18 0.00 43.62 2.57
53 54 2.177950 GCCTGTCACTGGCTCATTG 58.822 57.895 18.18 0.00 43.62 2.82
54 55 1.930908 GCCTGTCACTGGCTCATTGC 61.931 60.000 18.18 0.00 43.62 3.56
55 56 0.607217 CCTGTCACTGGCTCATTGCA 60.607 55.000 0.00 0.00 45.15 4.08
56 57 0.520404 CTGTCACTGGCTCATTGCAC 59.480 55.000 0.00 0.00 45.15 4.57
57 58 0.890542 TGTCACTGGCTCATTGCACC 60.891 55.000 0.00 0.00 45.15 5.01
58 59 0.890542 GTCACTGGCTCATTGCACCA 60.891 55.000 0.00 0.00 45.15 4.17
60 61 2.882876 CTGGCTCATTGCACCAGC 59.117 61.111 7.31 4.93 44.16 4.85
61 62 1.677966 CTGGCTCATTGCACCAGCT 60.678 57.895 7.31 0.00 44.16 4.24
62 63 1.934220 CTGGCTCATTGCACCAGCTG 61.934 60.000 6.78 6.78 44.16 4.24
64 65 2.882876 CTCATTGCACCAGCTGCC 59.117 61.111 8.66 0.00 46.51 4.85
65 66 1.974875 CTCATTGCACCAGCTGCCA 60.975 57.895 8.66 1.72 46.51 4.92
66 67 1.934220 CTCATTGCACCAGCTGCCAG 61.934 60.000 8.66 0.64 46.51 4.85
67 68 2.116772 ATTGCACCAGCTGCCAGT 59.883 55.556 8.66 0.00 46.51 4.00
68 69 1.532316 ATTGCACCAGCTGCCAGTT 60.532 52.632 8.66 0.00 46.51 3.16
69 70 0.251297 ATTGCACCAGCTGCCAGTTA 60.251 50.000 8.66 0.00 46.51 2.24
70 71 0.251297 TTGCACCAGCTGCCAGTTAT 60.251 50.000 8.66 0.00 46.51 1.89
71 72 0.961857 TGCACCAGCTGCCAGTTATG 60.962 55.000 8.66 0.00 46.51 1.90
72 73 0.677731 GCACCAGCTGCCAGTTATGA 60.678 55.000 8.66 0.00 40.42 2.15
73 74 2.020694 GCACCAGCTGCCAGTTATGAT 61.021 52.381 8.66 0.00 40.42 2.45
74 75 1.674441 CACCAGCTGCCAGTTATGATG 59.326 52.381 8.66 0.00 0.00 3.07
75 76 1.315690 CCAGCTGCCAGTTATGATGG 58.684 55.000 8.66 0.00 41.04 3.51
76 77 1.134007 CCAGCTGCCAGTTATGATGGA 60.134 52.381 8.66 0.00 40.51 3.41
77 78 2.646930 CAGCTGCCAGTTATGATGGAA 58.353 47.619 0.00 0.00 40.51 3.53
78 79 3.220110 CAGCTGCCAGTTATGATGGAAT 58.780 45.455 0.00 0.00 40.51 3.01
79 80 3.252701 CAGCTGCCAGTTATGATGGAATC 59.747 47.826 0.00 0.00 45.83 2.52
80 81 3.137913 AGCTGCCAGTTATGATGGAATCT 59.862 43.478 0.00 0.00 45.81 2.40
81 82 3.887716 GCTGCCAGTTATGATGGAATCTT 59.112 43.478 0.00 0.00 45.81 2.40
82 83 4.261489 GCTGCCAGTTATGATGGAATCTTG 60.261 45.833 0.00 0.00 45.81 3.02
83 84 4.858850 TGCCAGTTATGATGGAATCTTGT 58.141 39.130 0.00 0.00 45.81 3.16
84 85 4.883585 TGCCAGTTATGATGGAATCTTGTC 59.116 41.667 0.00 0.00 45.81 3.18
85 86 5.128919 GCCAGTTATGATGGAATCTTGTCT 58.871 41.667 0.00 0.00 45.81 3.41
86 87 5.591877 GCCAGTTATGATGGAATCTTGTCTT 59.408 40.000 0.00 0.00 45.81 3.01
87 88 6.767902 GCCAGTTATGATGGAATCTTGTCTTA 59.232 38.462 0.00 0.00 45.81 2.10
88 89 7.041508 GCCAGTTATGATGGAATCTTGTCTTAG 60.042 40.741 0.00 0.00 45.81 2.18
89 90 7.989741 CCAGTTATGATGGAATCTTGTCTTAGT 59.010 37.037 0.00 0.00 45.81 2.24
90 91 9.388506 CAGTTATGATGGAATCTTGTCTTAGTT 57.611 33.333 0.00 0.00 45.81 2.24
91 92 9.965902 AGTTATGATGGAATCTTGTCTTAGTTT 57.034 29.630 0.00 0.00 45.81 2.66
100 101 9.561270 GGAATCTTGTCTTAGTTTAATTCAAGC 57.439 33.333 0.00 0.00 33.01 4.01
101 102 9.267096 GAATCTTGTCTTAGTTTAATTCAAGCG 57.733 33.333 0.00 0.00 33.01 4.68
102 103 7.956420 TCTTGTCTTAGTTTAATTCAAGCGA 57.044 32.000 0.00 0.00 33.01 4.93
103 104 8.547967 TCTTGTCTTAGTTTAATTCAAGCGAT 57.452 30.769 0.00 0.00 33.01 4.58
104 105 8.656849 TCTTGTCTTAGTTTAATTCAAGCGATC 58.343 33.333 0.00 0.00 33.01 3.69
105 106 7.899178 TGTCTTAGTTTAATTCAAGCGATCA 57.101 32.000 0.00 0.00 0.00 2.92
106 107 8.492673 TGTCTTAGTTTAATTCAAGCGATCAT 57.507 30.769 0.00 0.00 0.00 2.45
107 108 8.390354 TGTCTTAGTTTAATTCAAGCGATCATG 58.610 33.333 0.00 0.00 0.00 3.07
108 109 7.374491 GTCTTAGTTTAATTCAAGCGATCATGC 59.626 37.037 0.00 0.00 0.00 4.06
109 110 4.925068 AGTTTAATTCAAGCGATCATGCC 58.075 39.130 0.00 0.00 34.65 4.40
110 111 3.988379 TTAATTCAAGCGATCATGCCC 57.012 42.857 0.00 0.00 34.65 5.36
111 112 1.035139 AATTCAAGCGATCATGCCCC 58.965 50.000 0.00 0.00 34.65 5.80
112 113 0.106569 ATTCAAGCGATCATGCCCCA 60.107 50.000 0.00 0.00 34.65 4.96
113 114 1.031571 TTCAAGCGATCATGCCCCAC 61.032 55.000 0.00 0.00 34.65 4.61
114 115 1.750018 CAAGCGATCATGCCCCACA 60.750 57.895 0.00 0.00 34.65 4.17
115 116 1.750399 AAGCGATCATGCCCCACAC 60.750 57.895 0.00 0.00 34.65 3.82
116 117 3.576356 GCGATCATGCCCCACACG 61.576 66.667 0.00 0.00 0.00 4.49
117 118 2.186644 CGATCATGCCCCACACGA 59.813 61.111 0.00 0.00 0.00 4.35
118 119 1.884464 CGATCATGCCCCACACGAG 60.884 63.158 0.00 0.00 0.00 4.18
119 120 2.124570 ATCATGCCCCACACGAGC 60.125 61.111 0.00 0.00 0.00 5.03
120 121 2.874648 GATCATGCCCCACACGAGCA 62.875 60.000 0.00 0.00 41.50 4.26
121 122 2.881539 ATCATGCCCCACACGAGCAG 62.882 60.000 0.00 0.00 40.40 4.24
122 123 3.321648 ATGCCCCACACGAGCAGA 61.322 61.111 0.00 0.00 40.40 4.26
123 124 3.612247 ATGCCCCACACGAGCAGAC 62.612 63.158 0.00 0.00 40.40 3.51
133 134 4.863925 GAGCAGACGCCGCCTCTC 62.864 72.222 0.00 0.00 39.83 3.20
136 137 4.803426 CAGACGCCGCCTCTCCAC 62.803 72.222 0.00 0.00 0.00 4.02
140 141 4.899239 CGCCGCCTCTCCACCATC 62.899 72.222 0.00 0.00 0.00 3.51
141 142 3.785859 GCCGCCTCTCCACCATCA 61.786 66.667 0.00 0.00 0.00 3.07
142 143 2.503061 CCGCCTCTCCACCATCAG 59.497 66.667 0.00 0.00 0.00 2.90
143 144 2.503061 CGCCTCTCCACCATCAGG 59.497 66.667 0.00 0.00 42.21 3.86
144 145 2.191641 GCCTCTCCACCATCAGGC 59.808 66.667 0.00 0.00 44.63 4.85
145 146 3.731547 CCTCTCCACCATCAGGCA 58.268 61.111 0.00 0.00 39.06 4.75
146 147 1.525923 CCTCTCCACCATCAGGCAG 59.474 63.158 0.00 0.00 39.06 4.85
147 148 1.270414 CCTCTCCACCATCAGGCAGT 61.270 60.000 0.00 0.00 39.06 4.40
148 149 0.617413 CTCTCCACCATCAGGCAGTT 59.383 55.000 0.00 0.00 39.06 3.16
149 150 0.325933 TCTCCACCATCAGGCAGTTG 59.674 55.000 0.00 0.00 39.06 3.16
150 151 0.679002 CTCCACCATCAGGCAGTTGG 60.679 60.000 5.53 5.53 41.90 3.77
151 152 1.133181 TCCACCATCAGGCAGTTGGA 61.133 55.000 13.27 0.69 39.08 3.53
152 153 0.962356 CCACCATCAGGCAGTTGGAC 60.962 60.000 13.27 0.00 39.08 4.02
153 154 0.962356 CACCATCAGGCAGTTGGACC 60.962 60.000 13.27 0.00 39.08 4.46
154 155 1.379044 CCATCAGGCAGTTGGACCC 60.379 63.158 0.95 0.00 39.08 4.46
163 164 1.528309 AGTTGGACCCCAAGCAACG 60.528 57.895 0.00 0.00 44.82 4.10
177 178 1.207329 AGCAACGGATCCAGGTAGAAC 59.793 52.381 13.41 0.00 0.00 3.01
187 188 1.202463 CCAGGTAGAACTGAGCATCCG 60.202 57.143 0.00 0.00 40.97 4.18
207 208 3.489738 CCGTCCAATCAAAATGGCATCTC 60.490 47.826 0.00 0.00 37.88 2.75
233 234 0.167251 CGTACAAATCGTTGCCCACC 59.833 55.000 0.00 0.00 38.39 4.61
235 236 0.402504 TACAAATCGTTGCCCACCCT 59.597 50.000 0.00 0.00 38.39 4.34
297 298 3.074369 TAGCAGCAGCAGCCGGTA 61.074 61.111 6.10 0.00 45.49 4.02
298 299 2.374830 CTAGCAGCAGCAGCCGGTAT 62.375 60.000 6.10 0.00 45.49 2.73
299 300 2.649245 TAGCAGCAGCAGCCGGTATG 62.649 60.000 6.10 3.53 45.49 2.39
300 301 3.580193 CAGCAGCAGCCGGTATGC 61.580 66.667 21.84 21.84 43.56 3.14
301 302 4.864334 AGCAGCAGCCGGTATGCC 62.864 66.667 24.52 13.73 44.97 4.40
302 303 4.864334 GCAGCAGCCGGTATGCCT 62.864 66.667 24.52 12.82 44.97 4.75
313 768 0.529992 GGTATGCCTTTCGGTCGAGG 60.530 60.000 0.00 0.00 36.09 4.63
347 802 2.125106 GGCAGACCAAGGCTACGG 60.125 66.667 1.45 1.45 35.26 4.02
381 836 0.100682 GTGCATGGATGAAGCTGCTG 59.899 55.000 1.35 0.00 35.66 4.41
392 847 4.082523 GCTGCTGCTACCGGTGGA 62.083 66.667 23.78 10.04 36.03 4.02
393 848 2.662596 CTGCTGCTACCGGTGGAA 59.337 61.111 23.78 11.05 0.00 3.53
394 849 1.003839 CTGCTGCTACCGGTGGAAA 60.004 57.895 23.78 7.90 0.00 3.13
395 850 1.298859 CTGCTGCTACCGGTGGAAAC 61.299 60.000 23.78 7.37 0.00 2.78
396 851 1.302192 GCTGCTACCGGTGGAAACA 60.302 57.895 23.78 9.36 38.70 2.83
397 852 0.887387 GCTGCTACCGGTGGAAACAA 60.887 55.000 23.78 0.00 46.06 2.83
398 853 1.821216 CTGCTACCGGTGGAAACAAT 58.179 50.000 23.78 0.00 46.06 2.71
399 854 1.737793 CTGCTACCGGTGGAAACAATC 59.262 52.381 23.78 2.07 46.06 2.67
413 868 4.378616 GGAAACAATCAATCAACGACAACG 59.621 41.667 0.00 0.00 45.75 4.10
415 870 2.289274 ACAATCAATCAACGACAACGCA 59.711 40.909 0.00 0.00 43.96 5.24
419 874 3.550561 TCAATCAACGACAACGCAAATC 58.449 40.909 0.00 0.00 43.96 2.17
425 880 3.414549 ACGACAACGCAAATCAAACTT 57.585 38.095 0.00 0.00 43.96 2.66
442 897 3.354089 ACTTGAAGCAAAACGACCATG 57.646 42.857 0.00 0.00 0.00 3.66
444 899 2.772568 TGAAGCAAAACGACCATGTG 57.227 45.000 0.00 0.00 0.00 3.21
445 900 1.336440 TGAAGCAAAACGACCATGTGG 59.664 47.619 0.00 0.00 42.17 4.17
446 901 0.031994 AAGCAAAACGACCATGTGGC 59.968 50.000 0.00 0.00 39.32 5.01
447 902 1.372872 GCAAAACGACCATGTGGCC 60.373 57.895 0.00 0.00 39.32 5.36
448 903 2.037053 CAAAACGACCATGTGGCCA 58.963 52.632 0.00 0.00 39.32 5.36
449 904 0.387202 CAAAACGACCATGTGGCCAA 59.613 50.000 7.24 0.00 39.32 4.52
450 905 1.115467 AAAACGACCATGTGGCCAAA 58.885 45.000 7.24 0.15 39.32 3.28
451 906 0.673437 AAACGACCATGTGGCCAAAG 59.327 50.000 7.24 0.00 39.32 2.77
452 907 0.179004 AACGACCATGTGGCCAAAGA 60.179 50.000 7.24 0.00 39.32 2.52
453 908 0.179004 ACGACCATGTGGCCAAAGAA 60.179 50.000 7.24 0.00 39.32 2.52
454 909 0.240945 CGACCATGTGGCCAAAGAAC 59.759 55.000 7.24 0.00 39.32 3.01
456 911 1.895131 GACCATGTGGCCAAAGAACAT 59.105 47.619 7.24 2.82 39.32 2.71
457 912 1.619827 ACCATGTGGCCAAAGAACATG 59.380 47.619 20.94 20.94 46.92 3.21
458 913 2.373540 CATGTGGCCAAAGAACATGG 57.626 50.000 20.39 6.79 44.76 3.66
465 920 0.597568 CCAAAGAACATGGCTTGCGA 59.402 50.000 0.00 0.00 0.00 5.10
466 921 1.203052 CCAAAGAACATGGCTTGCGAT 59.797 47.619 0.00 0.00 0.00 4.58
467 922 2.256174 CAAAGAACATGGCTTGCGATG 58.744 47.619 14.41 14.41 0.00 3.84
469 924 0.035152 AGAACATGGCTTGCGATGGA 60.035 50.000 18.82 0.00 0.00 3.41
470 925 0.099436 GAACATGGCTTGCGATGGAC 59.901 55.000 18.82 10.18 0.00 4.02
471 926 1.647545 AACATGGCTTGCGATGGACG 61.648 55.000 18.82 0.00 45.66 4.79
473 928 4.776322 TGGCTTGCGATGGACGGG 62.776 66.667 0.00 0.00 42.83 5.28
479 1039 2.822701 GCGATGGACGGGGGTTTC 60.823 66.667 0.00 0.00 42.83 2.78
497 1295 4.408694 GTTTCGTAGAGAGAGCTGACTTC 58.591 47.826 0.00 0.00 38.43 3.01
501 1299 0.329931 AGAGAGAGCTGACTTCCCGA 59.670 55.000 0.00 0.00 0.00 5.14
506 1304 1.022735 GAGCTGACTTCCCGACGATA 58.977 55.000 0.00 0.00 0.00 2.92
507 1305 1.609555 GAGCTGACTTCCCGACGATAT 59.390 52.381 0.00 0.00 0.00 1.63
519 1334 3.242837 CCCGACGATATGACGACTTTGTA 60.243 47.826 0.00 0.00 37.99 2.41
537 1352 2.292016 TGTAAAACAACCGGTCATGCAG 59.708 45.455 8.04 0.00 0.00 4.41
553 1368 1.303317 CAGCCCACCCCACAACTAC 60.303 63.158 0.00 0.00 0.00 2.73
556 1371 0.252197 GCCCACCCCACAACTACTAG 59.748 60.000 0.00 0.00 0.00 2.57
562 1377 3.446516 CACCCCACAACTACTAGAGGTAC 59.553 52.174 0.00 0.00 0.00 3.34
564 1379 4.541714 ACCCCACAACTACTAGAGGTACTA 59.458 45.833 0.00 0.00 41.55 1.82
565 1380 4.886489 CCCCACAACTACTAGAGGTACTAC 59.114 50.000 0.00 0.00 41.55 2.73
566 1381 5.339861 CCCCACAACTACTAGAGGTACTACT 60.340 48.000 0.00 0.00 41.55 2.57
567 1382 6.126652 CCCCACAACTACTAGAGGTACTACTA 60.127 46.154 0.00 0.00 41.55 1.82
568 1383 7.421147 CCCCACAACTACTAGAGGTACTACTAT 60.421 44.444 0.00 0.00 41.55 2.12
569 1384 8.654997 CCCACAACTACTAGAGGTACTACTATA 58.345 40.741 0.00 0.00 41.55 1.31
653 1478 6.663093 TGCTGATATTTTCCATAACCACTTGT 59.337 34.615 0.00 0.00 0.00 3.16
656 1481 9.613428 CTGATATTTTCCATAACCACTTGTAGA 57.387 33.333 0.00 0.00 0.00 2.59
685 1510 1.050767 GAAGAAAGTCGTCGTCACCG 58.949 55.000 0.00 0.00 0.00 4.94
693 1533 2.028484 GTCGTCACCGCAAGACCA 59.972 61.111 0.00 0.00 43.02 4.02
713 1557 0.877743 TCGCATGCGACAAAATCCAA 59.122 45.000 37.21 12.79 44.01 3.53
714 1558 1.135717 TCGCATGCGACAAAATCCAAG 60.136 47.619 37.21 6.36 44.01 3.61
715 1559 0.994263 GCATGCGACAAAATCCAAGC 59.006 50.000 0.00 0.00 0.00 4.01
716 1560 1.669502 GCATGCGACAAAATCCAAGCA 60.670 47.619 0.00 0.00 39.02 3.91
717 1561 2.256174 CATGCGACAAAATCCAAGCAG 58.744 47.619 0.00 0.00 38.04 4.24
718 1562 1.603456 TGCGACAAAATCCAAGCAGA 58.397 45.000 0.00 0.00 0.00 4.26
719 1563 1.952990 TGCGACAAAATCCAAGCAGAA 59.047 42.857 0.00 0.00 0.00 3.02
720 1564 2.030893 TGCGACAAAATCCAAGCAGAAG 60.031 45.455 0.00 0.00 0.00 2.85
806 1651 6.723131 AAACGCATCTTCTAAACTTACCTC 57.277 37.500 0.00 0.00 0.00 3.85
807 1652 5.662674 ACGCATCTTCTAAACTTACCTCT 57.337 39.130 0.00 0.00 0.00 3.69
808 1653 6.770746 ACGCATCTTCTAAACTTACCTCTA 57.229 37.500 0.00 0.00 0.00 2.43
809 1654 7.166691 ACGCATCTTCTAAACTTACCTCTAA 57.833 36.000 0.00 0.00 0.00 2.10
810 1655 7.034397 ACGCATCTTCTAAACTTACCTCTAAC 58.966 38.462 0.00 0.00 0.00 2.34
811 1656 6.476053 CGCATCTTCTAAACTTACCTCTAACC 59.524 42.308 0.00 0.00 0.00 2.85
812 1657 7.557724 GCATCTTCTAAACTTACCTCTAACCT 58.442 38.462 0.00 0.00 0.00 3.50
813 1658 7.707464 GCATCTTCTAAACTTACCTCTAACCTC 59.293 40.741 0.00 0.00 0.00 3.85
814 1659 7.388460 TCTTCTAAACTTACCTCTAACCTCG 57.612 40.000 0.00 0.00 0.00 4.63
815 1660 6.376581 TCTTCTAAACTTACCTCTAACCTCGG 59.623 42.308 0.00 0.00 0.00 4.63
816 1661 5.819991 TCTAAACTTACCTCTAACCTCGGA 58.180 41.667 0.00 0.00 0.00 4.55
817 1662 6.430007 TCTAAACTTACCTCTAACCTCGGAT 58.570 40.000 0.00 0.00 0.00 4.18
818 1663 5.595257 AAACTTACCTCTAACCTCGGATC 57.405 43.478 0.00 0.00 0.00 3.36
819 1664 4.246712 ACTTACCTCTAACCTCGGATCA 57.753 45.455 0.00 0.00 0.00 2.92
820 1665 4.208746 ACTTACCTCTAACCTCGGATCAG 58.791 47.826 0.00 0.00 0.00 2.90
821 1666 2.830651 ACCTCTAACCTCGGATCAGT 57.169 50.000 0.00 0.00 0.00 3.41
822 1667 3.103080 ACCTCTAACCTCGGATCAGTT 57.897 47.619 0.00 0.00 0.00 3.16
823 1668 3.025262 ACCTCTAACCTCGGATCAGTTC 58.975 50.000 0.00 0.00 0.00 3.01
824 1669 3.024547 CCTCTAACCTCGGATCAGTTCA 58.975 50.000 0.00 0.00 0.00 3.18
825 1670 3.639094 CCTCTAACCTCGGATCAGTTCAT 59.361 47.826 0.00 0.00 0.00 2.57
826 1671 4.100189 CCTCTAACCTCGGATCAGTTCATT 59.900 45.833 0.00 0.00 0.00 2.57
827 1672 5.263968 TCTAACCTCGGATCAGTTCATTC 57.736 43.478 0.00 0.00 0.00 2.67
828 1673 2.586258 ACCTCGGATCAGTTCATTCG 57.414 50.000 0.00 0.00 0.00 3.34
829 1674 1.212616 CCTCGGATCAGTTCATTCGC 58.787 55.000 0.00 0.00 0.00 4.70
830 1675 1.471501 CCTCGGATCAGTTCATTCGCA 60.472 52.381 0.00 0.00 0.00 5.10
831 1676 2.270923 CTCGGATCAGTTCATTCGCAA 58.729 47.619 0.00 0.00 0.00 4.85
832 1677 2.270923 TCGGATCAGTTCATTCGCAAG 58.729 47.619 0.00 0.00 0.00 4.01
833 1678 1.328680 CGGATCAGTTCATTCGCAAGG 59.671 52.381 0.00 0.00 38.47 3.61
834 1679 2.632377 GGATCAGTTCATTCGCAAGGA 58.368 47.619 0.00 0.00 38.47 3.36
835 1680 3.009723 GGATCAGTTCATTCGCAAGGAA 58.990 45.455 0.00 0.00 39.42 3.36
836 1681 3.440173 GGATCAGTTCATTCGCAAGGAAA 59.560 43.478 0.00 0.00 38.36 3.13
837 1682 4.082787 GGATCAGTTCATTCGCAAGGAAAA 60.083 41.667 0.00 0.00 38.36 2.29
838 1683 4.909696 TCAGTTCATTCGCAAGGAAAAA 57.090 36.364 0.00 0.00 38.36 1.94
873 1718 5.000012 AGTAACATCGGATCAGTTCACTC 58.000 43.478 0.00 0.00 0.00 3.51
875 1720 4.543590 AACATCGGATCAGTTCACTCTT 57.456 40.909 0.00 0.00 0.00 2.85
876 1721 4.116747 ACATCGGATCAGTTCACTCTTC 57.883 45.455 0.00 0.00 0.00 2.87
877 1722 3.511540 ACATCGGATCAGTTCACTCTTCA 59.488 43.478 0.00 0.00 0.00 3.02
878 1723 3.577649 TCGGATCAGTTCACTCTTCAC 57.422 47.619 0.00 0.00 0.00 3.18
883 1728 6.773200 TCGGATCAGTTCACTCTTCACTATAT 59.227 38.462 0.00 0.00 0.00 0.86
896 1741 8.542080 ACTCTTCACTATATATAGACGGTAGCT 58.458 37.037 23.70 0.00 34.50 3.32
915 1760 3.323729 CTTGCACAAGCCATACATACG 57.676 47.619 0.00 0.00 41.13 3.06
916 1761 1.013596 TGCACAAGCCATACATACGC 58.986 50.000 0.00 0.00 41.13 4.42
917 1762 1.013596 GCACAAGCCATACATACGCA 58.986 50.000 0.00 0.00 33.58 5.24
918 1763 1.268032 GCACAAGCCATACATACGCAC 60.268 52.381 0.00 0.00 33.58 5.34
919 1764 2.279741 CACAAGCCATACATACGCACT 58.720 47.619 0.00 0.00 0.00 4.40
921 1766 3.490896 CACAAGCCATACATACGCACTAG 59.509 47.826 0.00 0.00 0.00 2.57
922 1767 2.440539 AGCCATACATACGCACTAGC 57.559 50.000 0.00 0.00 37.42 3.42
923 1768 1.964223 AGCCATACATACGCACTAGCT 59.036 47.619 0.00 0.00 39.10 3.32
924 1769 3.154710 AGCCATACATACGCACTAGCTA 58.845 45.455 0.00 0.00 39.10 3.32
925 1770 3.191581 AGCCATACATACGCACTAGCTAG 59.808 47.826 19.44 19.44 39.10 3.42
943 1788 2.575993 CTAGCTGCACAGACGCCT 59.424 61.111 1.02 0.00 0.00 5.52
959 1809 2.364324 ACGCCTCACAAGAGTACAAGAA 59.636 45.455 0.00 0.00 40.40 2.52
961 1811 3.430218 CGCCTCACAAGAGTACAAGAAAG 59.570 47.826 0.00 0.00 40.40 2.62
965 1815 4.957296 TCACAAGAGTACAAGAAAGACCC 58.043 43.478 0.00 0.00 0.00 4.46
971 1821 4.409247 AGAGTACAAGAAAGACCCAACACT 59.591 41.667 0.00 0.00 0.00 3.55
995 1846 2.964740 ACAGTACGTACGTAGCTGAGA 58.035 47.619 36.60 18.31 35.62 3.27
1334 2185 1.153066 TTGCCAAGCTCAACGACCA 60.153 52.632 0.00 0.00 0.00 4.02
1338 2189 1.071471 CAAGCTCAACGACCAGGGT 59.929 57.895 0.00 0.00 0.00 4.34
1493 2344 1.725557 TACCCGCAGCTCATCGAGTC 61.726 60.000 0.00 0.00 31.39 3.36
1533 2384 8.289939 TCAAAGGTACTACCATTCTACTACTG 57.710 38.462 8.01 0.00 41.95 2.74
1569 2459 2.128367 CGTACCTACGTGCATGCATA 57.872 50.000 25.64 12.32 44.13 3.14
1619 2539 2.720659 CATGCATGCAGATGAGGCT 58.279 52.632 26.69 3.09 0.00 4.58
1628 2548 0.535797 CAGATGAGGCTCAGCTCACA 59.464 55.000 30.87 1.83 39.11 3.58
1655 2575 3.462169 CACCTGGACACGGTGGTA 58.538 61.111 13.48 0.00 46.38 3.25
1969 2901 3.069318 GGACGGCCTCCTCGACTT 61.069 66.667 0.00 0.00 35.89 3.01
2408 3347 2.027605 CTGGCGGCGATGATACGT 59.972 61.111 12.98 0.00 35.59 3.57
2623 7741 2.929398 CAGTGAACAAACAAGCCCAAAC 59.071 45.455 0.00 0.00 0.00 2.93
2641 7759 5.104374 CCAAACAGAATTATCCACATGCAC 58.896 41.667 0.00 0.00 0.00 4.57
2668 7786 2.225467 GTCCAATGCCTATCCAAGAGC 58.775 52.381 0.00 0.00 0.00 4.09
2722 7841 9.083080 GGCAACTTGTATTTTGTATGTTTATCC 57.917 33.333 0.00 0.00 0.00 2.59
2764 7883 9.010029 CAAAGTGTATTTTGGGTATTCTGTAGT 57.990 33.333 0.00 0.00 35.03 2.73
2765 7884 9.582648 AAAGTGTATTTTGGGTATTCTGTAGTT 57.417 29.630 0.00 0.00 0.00 2.24
2766 7885 9.582648 AAGTGTATTTTGGGTATTCTGTAGTTT 57.417 29.630 0.00 0.00 0.00 2.66
2767 7886 9.010029 AGTGTATTTTGGGTATTCTGTAGTTTG 57.990 33.333 0.00 0.00 0.00 2.93
2768 7887 7.753580 GTGTATTTTGGGTATTCTGTAGTTTGC 59.246 37.037 0.00 0.00 0.00 3.68
2769 7888 6.909550 ATTTTGGGTATTCTGTAGTTTGCA 57.090 33.333 0.00 0.00 0.00 4.08
2770 7889 6.716934 TTTTGGGTATTCTGTAGTTTGCAA 57.283 33.333 0.00 0.00 0.00 4.08
2771 7890 5.957842 TTGGGTATTCTGTAGTTTGCAAG 57.042 39.130 0.00 0.00 0.00 4.01
2979 8102 1.895707 AGTCGGGAAGTCGTCGTGT 60.896 57.895 0.00 0.00 0.00 4.49
3063 8187 3.884037 AGGATCCAACCTGAAAACACT 57.116 42.857 15.82 0.00 39.01 3.55
3065 8189 3.138283 AGGATCCAACCTGAAAACACTGA 59.862 43.478 15.82 0.00 39.01 3.41
3148 8272 1.374947 CTCCACACACCCACCGATT 59.625 57.895 0.00 0.00 0.00 3.34
3168 8292 2.348104 TGCTAGACGCATCACCGGT 61.348 57.895 0.00 0.00 45.47 5.28
3269 8394 9.981114 AACCCTAACAAAACTCAAAAATAGATG 57.019 29.630 0.00 0.00 0.00 2.90
3300 8425 3.970410 CTCCCACCAGCAAGGGCA 61.970 66.667 0.00 0.00 45.07 5.36
3437 8562 3.965258 TGCTGTTCGCATGGGGGT 61.965 61.111 10.21 0.00 45.47 4.95
3438 8563 2.676471 GCTGTTCGCATGGGGGTT 60.676 61.111 10.21 0.00 38.92 4.11
3439 8564 2.993471 GCTGTTCGCATGGGGGTTG 61.993 63.158 10.21 0.25 38.92 3.77
3440 8565 2.282816 TGTTCGCATGGGGGTTGG 60.283 61.111 10.21 0.00 0.00 3.77
3441 8566 3.758931 GTTCGCATGGGGGTTGGC 61.759 66.667 10.21 0.00 0.00 4.52
3442 8567 4.292145 TTCGCATGGGGGTTGGCA 62.292 61.111 10.21 0.00 0.00 4.92
3443 8568 3.598747 TTCGCATGGGGGTTGGCAT 62.599 57.895 10.21 0.00 0.00 4.40
3444 8569 3.840594 CGCATGGGGGTTGGCATG 61.841 66.667 0.89 0.00 0.00 4.06
3445 8570 2.684655 GCATGGGGGTTGGCATGT 60.685 61.111 0.00 0.00 0.00 3.21
3446 8571 3.021473 GCATGGGGGTTGGCATGTG 62.021 63.158 0.00 0.00 0.00 3.21
3447 8572 2.039299 ATGGGGGTTGGCATGTGG 59.961 61.111 0.00 0.00 0.00 4.17
3448 8573 2.556216 ATGGGGGTTGGCATGTGGA 61.556 57.895 0.00 0.00 0.00 4.02
3449 8574 1.889010 ATGGGGGTTGGCATGTGGAT 61.889 55.000 0.00 0.00 0.00 3.41
3450 8575 1.306056 GGGGGTTGGCATGTGGATT 60.306 57.895 0.00 0.00 0.00 3.01
3451 8576 1.329913 GGGGGTTGGCATGTGGATTC 61.330 60.000 0.00 0.00 0.00 2.52
3452 8577 1.329913 GGGGTTGGCATGTGGATTCC 61.330 60.000 0.00 0.00 0.00 3.01
3453 8578 1.329913 GGGTTGGCATGTGGATTCCC 61.330 60.000 0.00 0.00 0.00 3.97
3454 8579 0.324645 GGTTGGCATGTGGATTCCCT 60.325 55.000 0.00 0.00 0.00 4.20
3455 8580 1.560505 GTTGGCATGTGGATTCCCTT 58.439 50.000 0.00 0.00 0.00 3.95
3456 8581 1.901833 GTTGGCATGTGGATTCCCTTT 59.098 47.619 0.00 0.00 0.00 3.11
3457 8582 1.559368 TGGCATGTGGATTCCCTTTG 58.441 50.000 0.00 0.00 0.00 2.77
3458 8583 1.203162 TGGCATGTGGATTCCCTTTGT 60.203 47.619 0.00 0.00 0.00 2.83
3459 8584 1.205417 GGCATGTGGATTCCCTTTGTG 59.795 52.381 0.00 0.00 0.00 3.33
3460 8585 1.205417 GCATGTGGATTCCCTTTGTGG 59.795 52.381 0.00 0.00 0.00 4.17
3461 8586 2.806434 CATGTGGATTCCCTTTGTGGA 58.194 47.619 0.00 0.00 38.35 4.02
3462 8587 2.584835 TGTGGATTCCCTTTGTGGAG 57.415 50.000 0.00 0.00 38.35 3.86
3463 8588 1.177401 GTGGATTCCCTTTGTGGAGC 58.823 55.000 0.00 0.00 38.35 4.70
3464 8589 1.075601 TGGATTCCCTTTGTGGAGCT 58.924 50.000 0.00 0.00 38.35 4.09
3465 8590 2.026262 GTGGATTCCCTTTGTGGAGCTA 60.026 50.000 0.00 0.00 38.35 3.32
3466 8591 2.647299 TGGATTCCCTTTGTGGAGCTAA 59.353 45.455 0.00 0.00 38.35 3.09
3467 8592 3.075283 TGGATTCCCTTTGTGGAGCTAAA 59.925 43.478 0.00 0.00 38.35 1.85
3468 8593 3.696548 GGATTCCCTTTGTGGAGCTAAAG 59.303 47.826 0.47 0.47 38.35 1.85
3469 8594 2.200373 TCCCTTTGTGGAGCTAAAGC 57.800 50.000 1.77 0.00 42.49 3.51
3484 8609 5.117307 GCTAAAGCGTATTTTGCATGTTG 57.883 39.130 13.52 0.00 33.85 3.33
3485 8610 4.856487 GCTAAAGCGTATTTTGCATGTTGA 59.144 37.500 13.52 0.00 33.85 3.18
3486 8611 5.516339 GCTAAAGCGTATTTTGCATGTTGAT 59.484 36.000 13.52 0.00 33.85 2.57
3487 8612 6.034898 GCTAAAGCGTATTTTGCATGTTGATT 59.965 34.615 13.52 0.00 33.85 2.57
3488 8613 6.393720 AAAGCGTATTTTGCATGTTGATTC 57.606 33.333 0.00 0.00 33.85 2.52
3489 8614 5.314923 AGCGTATTTTGCATGTTGATTCT 57.685 34.783 0.00 0.00 33.85 2.40
3490 8615 5.097529 AGCGTATTTTGCATGTTGATTCTG 58.902 37.500 0.00 0.00 33.85 3.02
3491 8616 4.858692 GCGTATTTTGCATGTTGATTCTGT 59.141 37.500 0.00 0.00 0.00 3.41
3492 8617 5.345741 GCGTATTTTGCATGTTGATTCTGTT 59.654 36.000 0.00 0.00 0.00 3.16
3493 8618 6.526325 GCGTATTTTGCATGTTGATTCTGTTA 59.474 34.615 0.00 0.00 0.00 2.41
3494 8619 7.220683 GCGTATTTTGCATGTTGATTCTGTTAT 59.779 33.333 0.00 0.00 0.00 1.89
3495 8620 8.525876 CGTATTTTGCATGTTGATTCTGTTATG 58.474 33.333 0.00 0.00 0.00 1.90
3496 8621 9.571810 GTATTTTGCATGTTGATTCTGTTATGA 57.428 29.630 0.00 0.00 0.00 2.15
3498 8623 8.883954 TTTTGCATGTTGATTCTGTTATGAAA 57.116 26.923 0.00 0.00 0.00 2.69
3499 8624 8.523523 TTTGCATGTTGATTCTGTTATGAAAG 57.476 30.769 0.00 0.00 0.00 2.62
3500 8625 6.094719 TGCATGTTGATTCTGTTATGAAAGC 58.905 36.000 0.00 0.00 0.00 3.51
3501 8626 6.094719 GCATGTTGATTCTGTTATGAAAGCA 58.905 36.000 0.00 0.00 0.00 3.91
3502 8627 6.587226 GCATGTTGATTCTGTTATGAAAGCAA 59.413 34.615 0.00 0.00 0.00 3.91
3503 8628 7.411157 GCATGTTGATTCTGTTATGAAAGCAAC 60.411 37.037 8.13 8.13 40.95 4.17
3504 8629 7.275888 TGTTGATTCTGTTATGAAAGCAACT 57.724 32.000 14.16 0.00 41.04 3.16
3505 8630 7.715657 TGTTGATTCTGTTATGAAAGCAACTT 58.284 30.769 14.16 0.00 41.04 2.66
3506 8631 7.648908 TGTTGATTCTGTTATGAAAGCAACTTG 59.351 33.333 14.16 0.00 41.04 3.16
3507 8632 7.275888 TGATTCTGTTATGAAAGCAACTTGT 57.724 32.000 0.00 0.00 0.00 3.16
3508 8633 8.389779 TGATTCTGTTATGAAAGCAACTTGTA 57.610 30.769 0.00 0.00 0.00 2.41
3509 8634 9.013229 TGATTCTGTTATGAAAGCAACTTGTAT 57.987 29.630 0.00 0.00 0.00 2.29
3510 8635 9.846248 GATTCTGTTATGAAAGCAACTTGTATT 57.154 29.630 0.00 0.00 0.00 1.89
3513 8638 9.502091 TCTGTTATGAAAGCAACTTGTATTACT 57.498 29.630 0.00 0.00 0.00 2.24
3518 8643 8.807948 ATGAAAGCAACTTGTATTACTATGGT 57.192 30.769 0.00 0.00 0.00 3.55
3519 8644 8.039603 TGAAAGCAACTTGTATTACTATGGTG 57.960 34.615 0.00 0.00 0.00 4.17
3520 8645 6.436843 AAGCAACTTGTATTACTATGGTGC 57.563 37.500 12.77 12.77 0.00 5.01
3521 8646 4.881850 AGCAACTTGTATTACTATGGTGCC 59.118 41.667 15.31 0.00 0.00 5.01
3522 8647 4.638421 GCAACTTGTATTACTATGGTGCCA 59.362 41.667 10.80 0.00 0.00 4.92
3523 8648 5.124776 GCAACTTGTATTACTATGGTGCCAA 59.875 40.000 10.80 0.00 0.00 4.52
3524 8649 6.349777 GCAACTTGTATTACTATGGTGCCAAA 60.350 38.462 10.80 0.00 0.00 3.28
3525 8650 7.250569 CAACTTGTATTACTATGGTGCCAAAG 58.749 38.462 0.00 0.00 0.00 2.77
3526 8651 6.717289 ACTTGTATTACTATGGTGCCAAAGA 58.283 36.000 0.00 0.00 0.00 2.52
3527 8652 6.598064 ACTTGTATTACTATGGTGCCAAAGAC 59.402 38.462 0.00 0.00 0.00 3.01
3528 8653 5.433526 TGTATTACTATGGTGCCAAAGACC 58.566 41.667 0.00 0.00 0.00 3.85
3530 8655 2.496899 ACTATGGTGCCAAAGACCAG 57.503 50.000 0.00 0.00 46.66 4.00
3531 8656 1.098050 CTATGGTGCCAAAGACCAGC 58.902 55.000 0.00 0.00 46.66 4.85
3532 8657 0.403655 TATGGTGCCAAAGACCAGCA 59.596 50.000 0.00 0.00 46.66 4.41
3533 8658 0.251922 ATGGTGCCAAAGACCAGCAT 60.252 50.000 0.00 0.00 46.66 3.79
3534 8659 0.403655 TGGTGCCAAAGACCAGCATA 59.596 50.000 0.00 0.00 38.63 3.14
3535 8660 1.005805 TGGTGCCAAAGACCAGCATAT 59.994 47.619 0.00 0.00 38.63 1.78
3536 8661 2.240921 TGGTGCCAAAGACCAGCATATA 59.759 45.455 0.00 0.00 38.63 0.86
3537 8662 3.117550 TGGTGCCAAAGACCAGCATATAT 60.118 43.478 0.00 0.00 38.63 0.86
3538 8663 4.103943 TGGTGCCAAAGACCAGCATATATA 59.896 41.667 0.00 0.00 38.63 0.86
3539 8664 5.222109 TGGTGCCAAAGACCAGCATATATAT 60.222 40.000 0.00 0.00 38.63 0.86
3540 8665 6.012945 TGGTGCCAAAGACCAGCATATATATA 60.013 38.462 0.00 0.00 38.63 0.86
3541 8666 7.056635 GGTGCCAAAGACCAGCATATATATAT 58.943 38.462 0.00 0.00 39.04 0.86
3542 8667 7.012704 GGTGCCAAAGACCAGCATATATATATG 59.987 40.741 23.19 23.19 39.04 1.78
3543 8668 7.554118 GTGCCAAAGACCAGCATATATATATGT 59.446 37.037 26.27 14.77 41.63 2.29
3544 8669 8.767436 TGCCAAAGACCAGCATATATATATGTA 58.233 33.333 26.27 0.00 41.63 2.29
3545 8670 9.046296 GCCAAAGACCAGCATATATATATGTAC 57.954 37.037 26.27 15.08 41.63 2.90
3562 8687 5.939764 ATGTACTACAAGAGAATGCCAGA 57.060 39.130 0.00 0.00 0.00 3.86
3563 8688 5.738619 TGTACTACAAGAGAATGCCAGAA 57.261 39.130 0.00 0.00 0.00 3.02
3564 8689 5.724328 TGTACTACAAGAGAATGCCAGAAG 58.276 41.667 0.00 0.00 0.00 2.85
3565 8690 4.213564 ACTACAAGAGAATGCCAGAAGG 57.786 45.455 0.00 0.00 38.23 3.46
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 1.681793 GTTAGAGCATCGCAGTCCCTA 59.318 52.381 0.00 0.00 42.67 3.53
1 2 0.461961 GTTAGAGCATCGCAGTCCCT 59.538 55.000 0.00 0.00 42.67 4.20
2 3 0.530870 GGTTAGAGCATCGCAGTCCC 60.531 60.000 0.00 0.00 42.67 4.46
3 4 0.872021 CGGTTAGAGCATCGCAGTCC 60.872 60.000 0.00 0.00 42.67 3.85
4 5 0.872021 CCGGTTAGAGCATCGCAGTC 60.872 60.000 0.00 0.00 42.67 3.51
5 6 1.141881 CCGGTTAGAGCATCGCAGT 59.858 57.895 0.00 0.00 42.67 4.40
6 7 2.240500 GCCGGTTAGAGCATCGCAG 61.241 63.158 1.90 0.00 42.67 5.18
7 8 2.202878 GCCGGTTAGAGCATCGCA 60.203 61.111 1.90 0.00 42.67 5.10
8 9 2.967615 GGCCGGTTAGAGCATCGC 60.968 66.667 1.90 0.00 42.67 4.58
9 10 2.658593 CGGCCGGTTAGAGCATCG 60.659 66.667 20.10 0.00 42.67 3.84
10 11 2.280186 CCGGCCGGTTAGAGCATC 60.280 66.667 36.64 0.00 0.00 3.91
11 12 4.547367 GCCGGCCGGTTAGAGCAT 62.547 66.667 42.53 0.00 37.65 3.79
14 15 3.771160 ACAGCCGGCCGGTTAGAG 61.771 66.667 42.53 28.05 37.65 2.43
15 16 4.077184 CACAGCCGGCCGGTTAGA 62.077 66.667 42.53 0.00 37.65 2.10
16 17 2.901051 CTACACAGCCGGCCGGTTAG 62.901 65.000 42.53 32.65 37.65 2.34
17 18 2.996153 TACACAGCCGGCCGGTTA 60.996 61.111 42.53 21.69 37.65 2.85
18 19 4.388499 CTACACAGCCGGCCGGTT 62.388 66.667 42.53 36.73 37.65 4.44
28 29 3.521995 CCAGTGACAGGCTACACAG 57.478 57.895 20.45 14.61 39.18 3.66
36 37 0.607217 TGCAATGAGCCAGTGACAGG 60.607 55.000 6.79 0.00 44.83 4.00
37 38 0.520404 GTGCAATGAGCCAGTGACAG 59.480 55.000 6.79 0.00 44.83 3.51
38 39 0.890542 GGTGCAATGAGCCAGTGACA 60.891 55.000 6.79 2.52 44.83 3.58
39 40 0.890542 TGGTGCAATGAGCCAGTGAC 60.891 55.000 6.79 3.08 44.83 3.67
40 41 0.607217 CTGGTGCAATGAGCCAGTGA 60.607 55.000 11.27 0.00 43.42 3.41
41 42 1.880894 CTGGTGCAATGAGCCAGTG 59.119 57.895 11.27 0.00 43.42 3.66
42 43 4.410225 CTGGTGCAATGAGCCAGT 57.590 55.556 11.27 0.00 43.42 4.00
44 45 1.974875 CAGCTGGTGCAATGAGCCA 60.975 57.895 5.57 1.42 44.83 4.75
45 46 2.882876 CAGCTGGTGCAATGAGCC 59.117 61.111 5.57 0.00 44.83 4.70
54 55 1.674441 CATCATAACTGGCAGCTGGTG 59.326 52.381 17.12 12.35 0.00 4.17
55 56 1.409241 CCATCATAACTGGCAGCTGGT 60.409 52.381 17.12 3.16 0.00 4.00
56 57 1.134007 TCCATCATAACTGGCAGCTGG 60.134 52.381 17.12 11.71 33.56 4.85
57 58 2.336945 TCCATCATAACTGGCAGCTG 57.663 50.000 15.89 10.11 33.56 4.24
58 59 3.137913 AGATTCCATCATAACTGGCAGCT 59.862 43.478 15.89 4.69 33.56 4.24
59 60 3.484407 AGATTCCATCATAACTGGCAGC 58.516 45.455 15.89 0.00 33.56 5.25
60 61 4.885907 ACAAGATTCCATCATAACTGGCAG 59.114 41.667 14.16 14.16 33.56 4.85
61 62 4.858850 ACAAGATTCCATCATAACTGGCA 58.141 39.130 0.00 0.00 33.56 4.92
62 63 5.128919 AGACAAGATTCCATCATAACTGGC 58.871 41.667 0.00 0.00 33.56 4.85
63 64 7.989741 ACTAAGACAAGATTCCATCATAACTGG 59.010 37.037 0.00 0.00 34.93 4.00
64 65 8.954950 ACTAAGACAAGATTCCATCATAACTG 57.045 34.615 0.00 0.00 0.00 3.16
65 66 9.965902 AAACTAAGACAAGATTCCATCATAACT 57.034 29.630 0.00 0.00 0.00 2.24
74 75 9.561270 GCTTGAATTAAACTAAGACAAGATTCC 57.439 33.333 0.00 0.00 37.15 3.01
75 76 9.267096 CGCTTGAATTAAACTAAGACAAGATTC 57.733 33.333 0.00 0.00 37.15 2.52
76 77 8.999431 TCGCTTGAATTAAACTAAGACAAGATT 58.001 29.630 0.00 0.00 37.15 2.40
77 78 8.547967 TCGCTTGAATTAAACTAAGACAAGAT 57.452 30.769 0.00 0.00 37.15 2.40
78 79 7.956420 TCGCTTGAATTAAACTAAGACAAGA 57.044 32.000 0.00 0.00 37.15 3.02
79 80 8.443160 TGATCGCTTGAATTAAACTAAGACAAG 58.557 33.333 0.00 0.00 37.58 3.16
80 81 8.317891 TGATCGCTTGAATTAAACTAAGACAA 57.682 30.769 0.00 0.00 0.00 3.18
81 82 7.899178 TGATCGCTTGAATTAAACTAAGACA 57.101 32.000 0.00 0.00 0.00 3.41
82 83 7.374491 GCATGATCGCTTGAATTAAACTAAGAC 59.626 37.037 0.00 0.00 0.00 3.01
83 84 7.409697 GCATGATCGCTTGAATTAAACTAAGA 58.590 34.615 0.00 0.00 0.00 2.10
84 85 6.634436 GGCATGATCGCTTGAATTAAACTAAG 59.366 38.462 0.00 0.00 0.00 2.18
85 86 6.459573 GGGCATGATCGCTTGAATTAAACTAA 60.460 38.462 0.00 0.00 0.00 2.24
86 87 5.008613 GGGCATGATCGCTTGAATTAAACTA 59.991 40.000 0.00 0.00 0.00 2.24
87 88 4.202050 GGGCATGATCGCTTGAATTAAACT 60.202 41.667 0.00 0.00 0.00 2.66
88 89 4.044426 GGGCATGATCGCTTGAATTAAAC 58.956 43.478 0.00 0.00 0.00 2.01
89 90 3.068024 GGGGCATGATCGCTTGAATTAAA 59.932 43.478 0.00 0.00 0.00 1.52
90 91 2.622942 GGGGCATGATCGCTTGAATTAA 59.377 45.455 0.00 0.00 0.00 1.40
91 92 2.229792 GGGGCATGATCGCTTGAATTA 58.770 47.619 0.00 0.00 0.00 1.40
92 93 1.035139 GGGGCATGATCGCTTGAATT 58.965 50.000 0.00 0.00 0.00 2.17
93 94 0.106569 TGGGGCATGATCGCTTGAAT 60.107 50.000 0.00 0.00 0.00 2.57
94 95 1.031571 GTGGGGCATGATCGCTTGAA 61.032 55.000 0.00 0.00 0.00 2.69
95 96 1.451927 GTGGGGCATGATCGCTTGA 60.452 57.895 0.00 0.00 0.00 3.02
96 97 1.750018 TGTGGGGCATGATCGCTTG 60.750 57.895 0.00 0.00 0.00 4.01
97 98 1.750399 GTGTGGGGCATGATCGCTT 60.750 57.895 0.00 0.00 0.00 4.68
98 99 2.124570 GTGTGGGGCATGATCGCT 60.125 61.111 0.00 0.00 0.00 4.93
99 100 3.576356 CGTGTGGGGCATGATCGC 61.576 66.667 0.00 0.00 36.21 4.58
100 101 1.884464 CTCGTGTGGGGCATGATCG 60.884 63.158 0.00 0.00 41.78 3.69
101 102 2.182842 GCTCGTGTGGGGCATGATC 61.183 63.158 0.00 0.00 41.78 2.92
102 103 2.124570 GCTCGTGTGGGGCATGAT 60.125 61.111 0.00 0.00 41.78 2.45
103 104 3.610619 CTGCTCGTGTGGGGCATGA 62.611 63.158 0.00 0.00 40.54 3.07
104 105 3.129502 CTGCTCGTGTGGGGCATG 61.130 66.667 0.00 0.00 35.37 4.06
105 106 3.321648 TCTGCTCGTGTGGGGCAT 61.322 61.111 0.00 0.00 35.37 4.40
106 107 4.314440 GTCTGCTCGTGTGGGGCA 62.314 66.667 0.00 0.00 34.66 5.36
116 117 4.863925 GAGAGGCGGCGTCTGCTC 62.864 72.222 27.79 20.73 42.25 4.26
119 120 4.803426 GTGGAGAGGCGGCGTCTG 62.803 72.222 27.79 0.00 0.00 3.51
123 124 4.899239 GATGGTGGAGAGGCGGCG 62.899 72.222 0.51 0.51 0.00 6.46
124 125 3.746949 CTGATGGTGGAGAGGCGGC 62.747 68.421 0.00 0.00 0.00 6.53
125 126 2.503061 CTGATGGTGGAGAGGCGG 59.497 66.667 0.00 0.00 0.00 6.13
126 127 2.503061 CCTGATGGTGGAGAGGCG 59.497 66.667 0.00 0.00 0.00 5.52
127 128 2.191641 GCCTGATGGTGGAGAGGC 59.808 66.667 0.00 0.00 44.10 4.70
128 129 1.270414 ACTGCCTGATGGTGGAGAGG 61.270 60.000 0.00 0.00 35.27 3.69
129 130 0.617413 AACTGCCTGATGGTGGAGAG 59.383 55.000 0.00 0.00 35.27 3.20
130 131 0.325933 CAACTGCCTGATGGTGGAGA 59.674 55.000 0.00 0.00 35.27 3.71
131 132 0.679002 CCAACTGCCTGATGGTGGAG 60.679 60.000 0.00 0.00 34.34 3.86
132 133 1.133181 TCCAACTGCCTGATGGTGGA 61.133 55.000 0.00 0.00 39.36 4.02
133 134 0.962356 GTCCAACTGCCTGATGGTGG 60.962 60.000 0.00 0.00 39.36 4.61
134 135 0.962356 GGTCCAACTGCCTGATGGTG 60.962 60.000 0.00 0.00 39.36 4.17
135 136 1.380302 GGTCCAACTGCCTGATGGT 59.620 57.895 0.00 0.00 39.36 3.55
136 137 1.379044 GGGTCCAACTGCCTGATGG 60.379 63.158 0.00 0.00 39.66 3.51
137 138 1.379044 GGGGTCCAACTGCCTGATG 60.379 63.158 0.00 0.00 0.00 3.07
138 139 1.434513 TTGGGGTCCAACTGCCTGAT 61.435 55.000 0.00 0.00 38.75 2.90
139 140 2.067932 CTTGGGGTCCAACTGCCTGA 62.068 60.000 0.00 0.00 38.75 3.86
140 141 1.604593 CTTGGGGTCCAACTGCCTG 60.605 63.158 0.00 0.00 38.75 4.85
141 142 2.846532 CTTGGGGTCCAACTGCCT 59.153 61.111 0.00 0.00 38.75 4.75
142 143 2.991540 GCTTGGGGTCCAACTGCC 60.992 66.667 0.00 0.00 38.75 4.85
143 144 1.832167 TTGCTTGGGGTCCAACTGC 60.832 57.895 0.00 0.20 38.75 4.40
144 145 1.795170 CGTTGCTTGGGGTCCAACTG 61.795 60.000 0.00 0.00 38.75 3.16
145 146 1.528309 CGTTGCTTGGGGTCCAACT 60.528 57.895 0.00 0.00 38.75 3.16
146 147 2.561037 CCGTTGCTTGGGGTCCAAC 61.561 63.158 0.00 0.00 38.75 3.77
147 148 2.075355 ATCCGTTGCTTGGGGTCCAA 62.075 55.000 0.00 0.00 41.69 3.53
148 149 2.478335 GATCCGTTGCTTGGGGTCCA 62.478 60.000 0.00 0.00 0.00 4.02
149 150 1.749258 GATCCGTTGCTTGGGGTCC 60.749 63.158 0.00 0.00 0.00 4.46
150 151 1.749258 GGATCCGTTGCTTGGGGTC 60.749 63.158 0.00 0.00 32.44 4.46
151 152 2.355115 GGATCCGTTGCTTGGGGT 59.645 61.111 0.00 0.00 0.00 4.95
152 153 1.750399 CTGGATCCGTTGCTTGGGG 60.750 63.158 7.39 0.00 0.00 4.96
153 154 1.750399 CCTGGATCCGTTGCTTGGG 60.750 63.158 7.39 0.00 0.00 4.12
154 155 0.251916 TACCTGGATCCGTTGCTTGG 59.748 55.000 7.39 3.16 0.00 3.61
163 164 2.111384 TGCTCAGTTCTACCTGGATCC 58.889 52.381 4.20 4.20 33.14 3.36
177 178 2.028420 TTGATTGGACGGATGCTCAG 57.972 50.000 0.00 0.00 0.00 3.35
187 188 3.378112 TCGAGATGCCATTTTGATTGGAC 59.622 43.478 0.00 0.00 36.26 4.02
207 208 3.541516 GGCAACGATTTGTACGAGATTCG 60.542 47.826 9.41 9.41 39.34 3.34
235 236 3.204119 TCGCGCTCGTATTCCGGA 61.204 61.111 5.56 0.00 37.11 5.14
252 253 3.448686 CGAGCTGTTGGATTTATCGAGT 58.551 45.455 0.00 0.00 0.00 4.18
257 258 1.299541 CGGCGAGCTGTTGGATTTAT 58.700 50.000 0.00 0.00 0.00 1.40
301 302 2.391389 GCTTGGCCTCGACCGAAAG 61.391 63.158 3.32 0.00 0.00 2.62
302 303 2.358247 GCTTGGCCTCGACCGAAA 60.358 61.111 3.32 0.00 0.00 3.46
313 768 4.404654 CCGTTGCTTCGGCTTGGC 62.405 66.667 7.14 0.00 43.96 4.52
321 776 1.856265 CTTGGTCTGCCCGTTGCTTC 61.856 60.000 0.00 0.00 42.00 3.86
325 780 2.463589 TAGCCTTGGTCTGCCCGTTG 62.464 60.000 0.00 0.00 35.15 4.10
363 818 1.663379 GCAGCAGCTTCATCCATGCA 61.663 55.000 0.00 0.00 41.14 3.96
364 819 1.065928 GCAGCAGCTTCATCCATGC 59.934 57.895 0.00 0.00 38.97 4.06
381 836 1.816074 TGATTGTTTCCACCGGTAGC 58.184 50.000 6.87 0.00 0.00 3.58
384 839 2.870175 TGATTGATTGTTTCCACCGGT 58.130 42.857 0.00 0.00 0.00 5.28
388 843 4.854399 TGTCGTTGATTGATTGTTTCCAC 58.146 39.130 0.00 0.00 0.00 4.02
389 844 5.277825 GTTGTCGTTGATTGATTGTTTCCA 58.722 37.500 0.00 0.00 0.00 3.53
390 845 4.378616 CGTTGTCGTTGATTGATTGTTTCC 59.621 41.667 0.00 0.00 0.00 3.13
391 846 4.143824 GCGTTGTCGTTGATTGATTGTTTC 60.144 41.667 0.00 0.00 39.49 2.78
392 847 3.728718 GCGTTGTCGTTGATTGATTGTTT 59.271 39.130 0.00 0.00 39.49 2.83
393 848 3.242903 TGCGTTGTCGTTGATTGATTGTT 60.243 39.130 0.00 0.00 39.49 2.83
394 849 2.289274 TGCGTTGTCGTTGATTGATTGT 59.711 40.909 0.00 0.00 39.49 2.71
395 850 2.914861 TGCGTTGTCGTTGATTGATTG 58.085 42.857 0.00 0.00 39.49 2.67
396 851 3.617540 TTGCGTTGTCGTTGATTGATT 57.382 38.095 0.00 0.00 39.49 2.57
397 852 3.617540 TTTGCGTTGTCGTTGATTGAT 57.382 38.095 0.00 0.00 39.49 2.57
398 853 3.002759 TGATTTGCGTTGTCGTTGATTGA 59.997 39.130 0.00 0.00 39.49 2.57
399 854 3.295785 TGATTTGCGTTGTCGTTGATTG 58.704 40.909 0.00 0.00 39.49 2.67
413 868 4.957372 CGTTTTGCTTCAAGTTTGATTTGC 59.043 37.500 0.00 2.58 37.00 3.68
415 870 5.290885 GGTCGTTTTGCTTCAAGTTTGATTT 59.709 36.000 0.00 0.00 37.00 2.17
419 874 3.506810 TGGTCGTTTTGCTTCAAGTTTG 58.493 40.909 0.00 0.00 0.00 2.93
425 880 1.336440 CCACATGGTCGTTTTGCTTCA 59.664 47.619 0.00 0.00 0.00 3.02
446 901 0.597568 TCGCAAGCCATGTTCTTTGG 59.402 50.000 0.00 0.00 37.31 3.28
447 902 2.256174 CATCGCAAGCCATGTTCTTTG 58.744 47.619 0.00 0.00 37.18 2.77
448 903 1.203052 CCATCGCAAGCCATGTTCTTT 59.797 47.619 0.00 0.00 37.18 2.52
449 904 0.813184 CCATCGCAAGCCATGTTCTT 59.187 50.000 0.00 0.00 37.18 2.52
450 905 0.035152 TCCATCGCAAGCCATGTTCT 60.035 50.000 0.00 0.00 37.18 3.01
451 906 0.099436 GTCCATCGCAAGCCATGTTC 59.901 55.000 0.00 0.00 37.18 3.18
452 907 1.647545 CGTCCATCGCAAGCCATGTT 61.648 55.000 0.00 0.00 37.18 2.71
453 908 2.108514 CGTCCATCGCAAGCCATGT 61.109 57.895 0.00 0.00 37.18 3.21
454 909 2.711311 CGTCCATCGCAAGCCATG 59.289 61.111 0.00 0.00 37.18 3.66
456 911 4.776322 CCCGTCCATCGCAAGCCA 62.776 66.667 0.00 0.00 38.35 4.75
459 914 3.622060 AACCCCCGTCCATCGCAAG 62.622 63.158 0.00 0.00 38.35 4.01
460 915 3.198953 AAACCCCCGTCCATCGCAA 62.199 57.895 0.00 0.00 38.35 4.85
461 916 3.615509 GAAACCCCCGTCCATCGCA 62.616 63.158 0.00 0.00 38.35 5.10
462 917 2.822701 GAAACCCCCGTCCATCGC 60.823 66.667 0.00 0.00 38.35 4.58
463 918 1.947597 TACGAAACCCCCGTCCATCG 61.948 60.000 0.00 0.00 40.95 3.84
465 920 0.615544 TCTACGAAACCCCCGTCCAT 60.616 55.000 0.00 0.00 40.95 3.41
466 921 1.228831 TCTACGAAACCCCCGTCCA 60.229 57.895 0.00 0.00 40.95 4.02
467 922 0.967380 TCTCTACGAAACCCCCGTCC 60.967 60.000 0.00 0.00 40.95 4.79
469 924 0.038744 TCTCTCTACGAAACCCCCGT 59.961 55.000 0.00 0.00 43.26 5.28
470 925 0.739561 CTCTCTCTACGAAACCCCCG 59.260 60.000 0.00 0.00 0.00 5.73
471 926 0.460722 GCTCTCTCTACGAAACCCCC 59.539 60.000 0.00 0.00 0.00 5.40
473 928 2.093106 TCAGCTCTCTCTACGAAACCC 58.907 52.381 0.00 0.00 0.00 4.11
474 929 2.750712 AGTCAGCTCTCTCTACGAAACC 59.249 50.000 0.00 0.00 0.00 3.27
475 930 4.408694 GAAGTCAGCTCTCTCTACGAAAC 58.591 47.826 0.00 0.00 0.00 2.78
479 1039 1.673920 GGGAAGTCAGCTCTCTCTACG 59.326 57.143 0.00 0.00 0.00 3.51
497 1295 2.117137 CAAAGTCGTCATATCGTCGGG 58.883 52.381 0.00 0.00 0.00 5.14
501 1299 7.285788 GTTGTTTTACAAAGTCGTCATATCGT 58.714 34.615 0.00 0.00 40.15 3.73
506 1304 4.260866 CCGGTTGTTTTACAAAGTCGTCAT 60.261 41.667 0.00 0.00 40.15 3.06
507 1305 3.063725 CCGGTTGTTTTACAAAGTCGTCA 59.936 43.478 0.00 0.00 40.15 4.35
519 1334 0.031994 GCTGCATGACCGGTTGTTTT 59.968 50.000 9.42 0.00 0.00 2.43
537 1352 0.252197 CTAGTAGTTGTGGGGTGGGC 59.748 60.000 0.00 0.00 0.00 5.36
625 1450 8.995027 AGTGGTTATGGAAAATATCAGCAATA 57.005 30.769 0.00 0.00 0.00 1.90
653 1478 5.164233 CGACTTTCTTCACTTGCATCTCTA 58.836 41.667 0.00 0.00 0.00 2.43
656 1481 3.733337 ACGACTTTCTTCACTTGCATCT 58.267 40.909 0.00 0.00 0.00 2.90
685 1510 2.023741 CGCATGCGATGGTCTTGC 59.976 61.111 35.82 0.00 42.83 4.01
708 1552 2.652590 GAAGATGCCTTCTGCTTGGAT 58.347 47.619 0.00 0.00 44.13 3.41
709 1553 2.119801 GAAGATGCCTTCTGCTTGGA 57.880 50.000 0.00 0.00 44.13 3.53
717 1561 6.404513 CTCTTCCATTTTGAGAAGATGCCTTC 60.405 42.308 3.15 0.00 45.51 3.46
718 1562 5.327732 TCTTCCATTTTGAGAAGATGCCTT 58.672 37.500 0.00 0.00 42.67 4.35
719 1563 4.927049 TCTTCCATTTTGAGAAGATGCCT 58.073 39.130 0.00 0.00 42.67 4.75
720 1564 4.946157 TCTCTTCCATTTTGAGAAGATGCC 59.054 41.667 3.15 0.00 45.51 4.40
762 1606 1.227234 GCCTGGGTTTGTTGCACAC 60.227 57.895 0.00 0.00 0.00 3.82
763 1607 0.106469 TAGCCTGGGTTTGTTGCACA 60.106 50.000 2.65 0.00 0.00 4.57
764 1608 1.036707 TTAGCCTGGGTTTGTTGCAC 58.963 50.000 2.65 0.00 0.00 4.57
765 1609 1.781786 TTTAGCCTGGGTTTGTTGCA 58.218 45.000 2.65 0.00 0.00 4.08
806 1651 4.045104 CGAATGAACTGATCCGAGGTTAG 58.955 47.826 0.00 0.00 0.00 2.34
807 1652 3.737047 GCGAATGAACTGATCCGAGGTTA 60.737 47.826 0.00 0.00 0.00 2.85
808 1653 2.893637 CGAATGAACTGATCCGAGGTT 58.106 47.619 0.00 0.00 0.00 3.50
809 1654 1.471676 GCGAATGAACTGATCCGAGGT 60.472 52.381 0.00 0.00 0.00 3.85
810 1655 1.212616 GCGAATGAACTGATCCGAGG 58.787 55.000 0.00 0.00 0.00 4.63
811 1656 1.926561 TGCGAATGAACTGATCCGAG 58.073 50.000 0.00 0.00 0.00 4.63
812 1657 2.270923 CTTGCGAATGAACTGATCCGA 58.729 47.619 0.00 0.00 0.00 4.55
813 1658 1.328680 CCTTGCGAATGAACTGATCCG 59.671 52.381 0.00 0.00 0.00 4.18
814 1659 2.632377 TCCTTGCGAATGAACTGATCC 58.368 47.619 0.00 0.00 0.00 3.36
815 1660 4.685169 TTTCCTTGCGAATGAACTGATC 57.315 40.909 0.00 0.00 0.00 2.92
816 1661 5.452078 TTTTTCCTTGCGAATGAACTGAT 57.548 34.783 0.00 0.00 0.00 2.90
817 1662 4.909696 TTTTTCCTTGCGAATGAACTGA 57.090 36.364 0.00 0.00 0.00 3.41
835 1680 7.173390 CCGATGTTACTCTTCCTTCTTCTTTTT 59.827 37.037 0.00 0.00 0.00 1.94
836 1681 6.651225 CCGATGTTACTCTTCCTTCTTCTTTT 59.349 38.462 0.00 0.00 0.00 2.27
837 1682 6.014499 TCCGATGTTACTCTTCCTTCTTCTTT 60.014 38.462 0.00 0.00 0.00 2.52
838 1683 5.480772 TCCGATGTTACTCTTCCTTCTTCTT 59.519 40.000 0.00 0.00 0.00 2.52
839 1684 5.017490 TCCGATGTTACTCTTCCTTCTTCT 58.983 41.667 0.00 0.00 0.00 2.85
840 1685 5.326200 TCCGATGTTACTCTTCCTTCTTC 57.674 43.478 0.00 0.00 0.00 2.87
841 1686 5.422331 TGATCCGATGTTACTCTTCCTTCTT 59.578 40.000 0.00 0.00 0.00 2.52
842 1687 4.956700 TGATCCGATGTTACTCTTCCTTCT 59.043 41.667 0.00 0.00 0.00 2.85
843 1688 5.163499 ACTGATCCGATGTTACTCTTCCTTC 60.163 44.000 0.00 0.00 0.00 3.46
844 1689 4.712337 ACTGATCCGATGTTACTCTTCCTT 59.288 41.667 0.00 0.00 0.00 3.36
845 1690 4.282496 ACTGATCCGATGTTACTCTTCCT 58.718 43.478 0.00 0.00 0.00 3.36
846 1691 4.657436 ACTGATCCGATGTTACTCTTCC 57.343 45.455 0.00 0.00 0.00 3.46
847 1692 5.517054 GTGAACTGATCCGATGTTACTCTTC 59.483 44.000 0.00 0.00 0.00 2.87
848 1693 5.186021 AGTGAACTGATCCGATGTTACTCTT 59.814 40.000 0.00 0.00 0.00 2.85
849 1694 4.707448 AGTGAACTGATCCGATGTTACTCT 59.293 41.667 0.00 0.00 0.00 3.24
850 1695 5.000012 AGTGAACTGATCCGATGTTACTC 58.000 43.478 0.00 0.00 0.00 2.59
857 1702 3.766591 AGTGAAGAGTGAACTGATCCGAT 59.233 43.478 0.00 0.00 0.00 4.18
873 1718 7.911205 GCAAGCTACCGTCTATATATAGTGAAG 59.089 40.741 17.44 12.72 0.00 3.02
875 1720 6.882678 TGCAAGCTACCGTCTATATATAGTGA 59.117 38.462 17.44 0.00 0.00 3.41
876 1721 6.967767 GTGCAAGCTACCGTCTATATATAGTG 59.032 42.308 17.44 11.93 0.00 2.74
877 1722 6.657966 TGTGCAAGCTACCGTCTATATATAGT 59.342 38.462 17.44 4.08 0.00 2.12
878 1723 7.085052 TGTGCAAGCTACCGTCTATATATAG 57.915 40.000 12.84 12.84 0.00 1.31
883 1728 4.041740 CTTGTGCAAGCTACCGTCTATA 57.958 45.455 0.00 0.00 0.00 1.31
896 1741 1.400142 GCGTATGTATGGCTTGTGCAA 59.600 47.619 0.00 0.00 41.91 4.08
905 1750 3.191581 AGCTAGCTAGTGCGTATGTATGG 59.808 47.826 17.69 0.00 45.42 2.74
922 1767 0.869454 GCGTCTGTGCAGCTAGCTAG 60.869 60.000 18.86 16.84 45.94 3.42
923 1768 1.139734 GCGTCTGTGCAGCTAGCTA 59.860 57.895 18.86 0.00 45.94 3.32
924 1769 2.125753 GCGTCTGTGCAGCTAGCT 60.126 61.111 12.68 12.68 45.94 3.32
925 1770 3.191539 GGCGTCTGTGCAGCTAGC 61.192 66.667 6.62 6.62 45.96 3.42
943 1788 4.407621 TGGGTCTTTCTTGTACTCTTGTGA 59.592 41.667 0.00 0.00 0.00 3.58
959 1809 1.485066 ACTGTTCGAGTGTTGGGTCTT 59.515 47.619 0.00 0.00 31.75 3.01
961 1811 2.401351 GTACTGTTCGAGTGTTGGGTC 58.599 52.381 0.00 0.00 35.96 4.46
965 1815 2.648897 CGTACGTACTGTTCGAGTGTTG 59.351 50.000 22.55 0.00 43.18 3.33
971 1821 2.092681 CAGCTACGTACGTACTGTTCGA 59.907 50.000 29.60 13.58 43.18 3.71
1260 2111 4.742201 GAGTTGCAGAGCGCGGGA 62.742 66.667 8.83 0.00 46.97 5.14
1493 2344 0.382515 TTTGAAAGGCACGAAACCCG 59.617 50.000 0.00 0.00 45.44 5.28
1519 2370 3.892588 GGAGCTAGCAGTAGTAGAATGGT 59.107 47.826 18.83 0.00 0.00 3.55
1527 2378 5.568023 CGATCTAGTAGGAGCTAGCAGTAGT 60.568 48.000 18.83 10.10 38.58 2.73
1533 2384 3.934579 GGTACGATCTAGTAGGAGCTAGC 59.065 52.174 6.62 6.62 38.58 3.42
1569 2459 4.300803 CACACTTGTTACAGCATGCAATT 58.699 39.130 21.98 5.67 42.53 2.32
1619 2539 1.005748 CGCCTTGTCTGTGAGCTGA 60.006 57.895 0.00 0.00 0.00 4.26
1628 2548 3.241530 TCCAGGTGCGCCTTGTCT 61.242 61.111 18.42 0.00 44.18 3.41
2408 3347 2.002977 CTCCCCTTCCATGGCCTCA 61.003 63.158 6.96 0.00 0.00 3.86
2623 7741 4.345288 CAACGTGCATGTGGATAATTCTG 58.655 43.478 13.39 0.00 0.00 3.02
2641 7759 0.106719 ATAGGCATTGGACCCCAACG 60.107 55.000 0.00 0.00 46.95 4.10
2693 7812 2.432206 ACAAAATACAAGTTGCCCGC 57.568 45.000 1.81 0.00 0.00 6.13
2794 7916 8.856103 TGTACTACCATGATCGAAGATGAATAA 58.144 33.333 8.27 0.00 45.12 1.40
2806 7928 5.408356 AGTGTTCGTTGTACTACCATGATC 58.592 41.667 0.00 0.00 0.00 2.92
2844 7966 4.281182 GGTGGTTCACGGATCTAGATGTAT 59.719 45.833 10.74 0.00 34.83 2.29
2851 7973 2.029623 GCTAGGTGGTTCACGGATCTA 58.970 52.381 0.00 0.00 34.83 1.98
2860 7982 1.089920 TAGTCGTCGCTAGGTGGTTC 58.910 55.000 0.00 0.00 0.00 3.62
2979 8102 4.351407 TGTGTTGGTTCTATGGGGTCTTAA 59.649 41.667 0.00 0.00 0.00 1.85
3063 8187 8.468720 TTTGTTCGTCGTTCATCTATATTTCA 57.531 30.769 0.00 0.00 0.00 2.69
3065 8189 8.548721 GGATTTGTTCGTCGTTCATCTATATTT 58.451 33.333 0.00 0.00 0.00 1.40
3138 8262 1.340248 CGTCTAGCATAATCGGTGGGT 59.660 52.381 0.00 0.00 0.00 4.51
3178 8302 1.450642 GAATAAGGTCTCCCCGCCC 59.549 63.158 0.00 0.00 38.74 6.13
3198 8323 4.521062 CGGCGGCTCCCTGAAGAG 62.521 72.222 7.61 0.00 36.92 2.85
3230 8355 4.624015 TGTTAGGGTTTGTGTTCTACTCG 58.376 43.478 0.00 0.00 0.00 4.18
3361 8486 0.894184 TTCTCTTGCCTCTCGTCGGT 60.894 55.000 0.00 0.00 0.00 4.69
3365 8490 0.321996 GGGTTTCTCTTGCCTCTCGT 59.678 55.000 0.00 0.00 0.00 4.18
3368 8493 1.557371 GCTAGGGTTTCTCTTGCCTCT 59.443 52.381 0.00 0.00 0.00 3.69
3433 8558 1.329913 GGAATCCACATGCCAACCCC 61.330 60.000 0.00 0.00 0.00 4.95
3434 8559 1.329913 GGGAATCCACATGCCAACCC 61.330 60.000 0.09 0.00 26.45 4.11
3435 8560 0.324645 AGGGAATCCACATGCCAACC 60.325 55.000 0.09 0.00 34.83 3.77
3436 8561 1.560505 AAGGGAATCCACATGCCAAC 58.439 50.000 0.09 0.00 34.83 3.77
3437 8562 1.901159 CAAAGGGAATCCACATGCCAA 59.099 47.619 0.09 0.00 34.83 4.52
3438 8563 1.203162 ACAAAGGGAATCCACATGCCA 60.203 47.619 0.09 0.00 34.83 4.92
3439 8564 1.205417 CACAAAGGGAATCCACATGCC 59.795 52.381 0.09 0.00 34.83 4.40
3440 8565 1.205417 CCACAAAGGGAATCCACATGC 59.795 52.381 0.09 0.00 34.83 4.06
3441 8566 2.756760 CTCCACAAAGGGAATCCACATG 59.243 50.000 0.09 0.00 36.27 3.21
3442 8567 2.885554 GCTCCACAAAGGGAATCCACAT 60.886 50.000 0.09 0.00 36.27 3.21
3443 8568 1.547675 GCTCCACAAAGGGAATCCACA 60.548 52.381 0.09 0.00 36.27 4.17
3444 8569 1.177401 GCTCCACAAAGGGAATCCAC 58.823 55.000 0.09 0.00 36.27 4.02
3445 8570 1.075601 AGCTCCACAAAGGGAATCCA 58.924 50.000 0.09 0.00 36.27 3.41
3446 8571 3.366052 TTAGCTCCACAAAGGGAATCC 57.634 47.619 0.00 0.00 36.27 3.01
3447 8572 3.129462 GCTTTAGCTCCACAAAGGGAATC 59.871 47.826 8.42 0.00 36.27 2.52
3448 8573 3.092301 GCTTTAGCTCCACAAAGGGAAT 58.908 45.455 8.42 0.00 36.27 3.01
3449 8574 2.514803 GCTTTAGCTCCACAAAGGGAA 58.485 47.619 8.42 0.00 36.27 3.97
3450 8575 1.610624 CGCTTTAGCTCCACAAAGGGA 60.611 52.381 15.20 0.00 43.57 4.20
3451 8576 0.804989 CGCTTTAGCTCCACAAAGGG 59.195 55.000 8.76 8.76 38.04 3.95
3452 8577 1.523758 ACGCTTTAGCTCCACAAAGG 58.476 50.000 8.42 2.58 39.32 3.11
3453 8578 4.946784 AATACGCTTTAGCTCCACAAAG 57.053 40.909 0.00 0.00 39.32 2.77
3454 8579 5.457140 CAAAATACGCTTTAGCTCCACAAA 58.543 37.500 0.00 0.00 39.32 2.83
3455 8580 4.614993 GCAAAATACGCTTTAGCTCCACAA 60.615 41.667 0.00 0.00 39.32 3.33
3456 8581 3.119990 GCAAAATACGCTTTAGCTCCACA 60.120 43.478 0.00 0.00 39.32 4.17
3457 8582 3.119990 TGCAAAATACGCTTTAGCTCCAC 60.120 43.478 0.00 0.00 39.32 4.02
3458 8583 3.078097 TGCAAAATACGCTTTAGCTCCA 58.922 40.909 0.00 0.00 39.32 3.86
3459 8584 3.757745 TGCAAAATACGCTTTAGCTCC 57.242 42.857 0.00 0.00 39.32 4.70
3460 8585 4.662145 ACATGCAAAATACGCTTTAGCTC 58.338 39.130 0.00 0.00 39.32 4.09
3461 8586 4.701956 ACATGCAAAATACGCTTTAGCT 57.298 36.364 0.00 0.00 39.32 3.32
3462 8587 4.856487 TCAACATGCAAAATACGCTTTAGC 59.144 37.500 0.00 0.00 37.78 3.09
3463 8588 7.485913 AGAATCAACATGCAAAATACGCTTTAG 59.514 33.333 0.00 0.00 0.00 1.85
3464 8589 7.273164 CAGAATCAACATGCAAAATACGCTTTA 59.727 33.333 0.00 0.00 0.00 1.85
3465 8590 6.089820 CAGAATCAACATGCAAAATACGCTTT 59.910 34.615 0.00 0.00 0.00 3.51
3466 8591 5.574055 CAGAATCAACATGCAAAATACGCTT 59.426 36.000 0.00 0.00 0.00 4.68
3467 8592 5.097529 CAGAATCAACATGCAAAATACGCT 58.902 37.500 0.00 0.00 0.00 5.07
3468 8593 4.858692 ACAGAATCAACATGCAAAATACGC 59.141 37.500 0.00 0.00 0.00 4.42
3469 8594 6.932901 AACAGAATCAACATGCAAAATACG 57.067 33.333 0.00 0.00 0.00 3.06
3470 8595 9.571810 TCATAACAGAATCAACATGCAAAATAC 57.428 29.630 0.00 0.00 0.00 1.89
3472 8597 9.491675 TTTCATAACAGAATCAACATGCAAAAT 57.508 25.926 0.00 0.00 0.00 1.82
3484 8609 9.846248 AATACAAGTTGCTTTCATAACAGAATC 57.154 29.630 1.81 0.00 0.00 2.52
3487 8612 9.502091 AGTAATACAAGTTGCTTTCATAACAGA 57.498 29.630 1.81 0.00 0.00 3.41
3492 8617 9.899661 ACCATAGTAATACAAGTTGCTTTCATA 57.100 29.630 1.81 0.00 0.00 2.15
3493 8618 8.677300 CACCATAGTAATACAAGTTGCTTTCAT 58.323 33.333 1.81 0.00 0.00 2.57
3494 8619 7.361713 GCACCATAGTAATACAAGTTGCTTTCA 60.362 37.037 1.81 0.00 0.00 2.69
3495 8620 6.967199 GCACCATAGTAATACAAGTTGCTTTC 59.033 38.462 1.81 0.00 0.00 2.62
3496 8621 6.127730 GGCACCATAGTAATACAAGTTGCTTT 60.128 38.462 1.81 0.00 0.00 3.51
3497 8622 5.357032 GGCACCATAGTAATACAAGTTGCTT 59.643 40.000 1.81 0.00 0.00 3.91
3498 8623 4.881850 GGCACCATAGTAATACAAGTTGCT 59.118 41.667 1.81 0.00 0.00 3.91
3499 8624 4.638421 TGGCACCATAGTAATACAAGTTGC 59.362 41.667 1.81 0.00 0.00 4.17
3500 8625 6.751514 TTGGCACCATAGTAATACAAGTTG 57.248 37.500 0.00 0.00 0.00 3.16
3501 8626 7.120726 GTCTTTGGCACCATAGTAATACAAGTT 59.879 37.037 6.97 0.00 0.00 2.66
3502 8627 6.598064 GTCTTTGGCACCATAGTAATACAAGT 59.402 38.462 6.97 0.00 0.00 3.16
3503 8628 6.038271 GGTCTTTGGCACCATAGTAATACAAG 59.962 42.308 6.97 0.00 33.63 3.16
3504 8629 5.883673 GGTCTTTGGCACCATAGTAATACAA 59.116 40.000 6.97 0.00 33.63 2.41
3505 8630 5.045505 TGGTCTTTGGCACCATAGTAATACA 60.046 40.000 6.97 0.00 39.11 2.29
3506 8631 5.433526 TGGTCTTTGGCACCATAGTAATAC 58.566 41.667 6.97 0.00 39.11 1.89
3507 8632 5.680619 CTGGTCTTTGGCACCATAGTAATA 58.319 41.667 6.97 0.00 43.21 0.98
3508 8633 4.526970 CTGGTCTTTGGCACCATAGTAAT 58.473 43.478 6.97 0.00 43.21 1.89
3509 8634 3.872240 GCTGGTCTTTGGCACCATAGTAA 60.872 47.826 6.97 0.00 43.21 2.24
3510 8635 2.355716 GCTGGTCTTTGGCACCATAGTA 60.356 50.000 6.97 0.00 43.21 1.82
3511 8636 1.614317 GCTGGTCTTTGGCACCATAGT 60.614 52.381 6.97 0.00 43.21 2.12
3512 8637 1.098050 GCTGGTCTTTGGCACCATAG 58.902 55.000 1.06 1.06 43.21 2.23
3513 8638 0.403655 TGCTGGTCTTTGGCACCATA 59.596 50.000 0.00 0.00 43.21 2.74
3514 8639 0.251922 ATGCTGGTCTTTGGCACCAT 60.252 50.000 0.00 0.00 43.21 3.55
3515 8640 0.403655 TATGCTGGTCTTTGGCACCA 59.596 50.000 0.00 0.00 41.91 4.17
3516 8641 1.767759 ATATGCTGGTCTTTGGCACC 58.232 50.000 0.00 0.00 38.83 5.01
3517 8642 7.554118 ACATATATATATGCTGGTCTTTGGCAC 59.446 37.037 26.04 0.00 42.98 5.01
3518 8643 7.632861 ACATATATATATGCTGGTCTTTGGCA 58.367 34.615 26.04 0.00 42.98 4.92
3519 8644 9.046296 GTACATATATATATGCTGGTCTTTGGC 57.954 37.037 26.04 5.16 42.98 4.52
3536 8661 9.314133 TCTGGCATTCTCTTGTAGTACATATAT 57.686 33.333 3.28 0.00 0.00 0.86
3537 8662 8.706322 TCTGGCATTCTCTTGTAGTACATATA 57.294 34.615 3.28 0.00 0.00 0.86
3538 8663 7.603180 TCTGGCATTCTCTTGTAGTACATAT 57.397 36.000 3.28 0.00 0.00 1.78
3539 8664 7.417911 CCTTCTGGCATTCTCTTGTAGTACATA 60.418 40.741 3.28 0.00 0.00 2.29
3540 8665 5.939764 TCTGGCATTCTCTTGTAGTACAT 57.060 39.130 3.28 0.00 0.00 2.29
3541 8666 5.337571 CCTTCTGGCATTCTCTTGTAGTACA 60.338 44.000 0.00 0.00 0.00 2.90
3542 8667 5.112686 CCTTCTGGCATTCTCTTGTAGTAC 58.887 45.833 0.00 0.00 0.00 2.73
3543 8668 5.344743 CCTTCTGGCATTCTCTTGTAGTA 57.655 43.478 0.00 0.00 0.00 1.82
3544 8669 4.213564 CCTTCTGGCATTCTCTTGTAGT 57.786 45.455 0.00 0.00 0.00 2.73


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.