Multiple sequence alignment - TraesCS2B01G289600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)



BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G289600 chr2B 100.000 6278 0 0 1 6278 400627971 400621694 0.000000e+00 11594.0
1 TraesCS2B01G289600 chr2B 96.473 1446 50 1 4095 5540 400603850 400605294 0.000000e+00 2386.0
2 TraesCS2B01G289600 chr2B 90.132 152 15 0 2398 2549 685741127 685740976 1.380000e-46 198.0
3 TraesCS2B01G289600 chr2B 90.345 145 12 1 353 495 754961052 754961196 8.310000e-44 189.0
4 TraesCS2B01G289600 chr2B 89.404 151 11 4 356 503 765148676 765148528 1.070000e-42 185.0
5 TraesCS2B01G289600 chr2B 92.105 114 9 0 494 607 754961228 754961341 1.810000e-35 161.0
6 TraesCS2B01G289600 chr2B 91.964 112 9 0 494 605 160041451 160041340 2.340000e-34 158.0
7 TraesCS2B01G289600 chr2B 91.667 48 4 0 6152 6199 181421436 181421389 4.060000e-07 67.6
8 TraesCS2B01G289600 chr2A 94.596 2961 82 27 2548 5498 440928290 440925398 0.000000e+00 4510.0
9 TraesCS2B01G289600 chr2A 97.149 1789 26 7 617 2397 440930052 440928281 0.000000e+00 2998.0
10 TraesCS2B01G289600 chr2A 92.521 361 15 3 1 352 440930432 440930075 2.020000e-139 507.0
11 TraesCS2B01G289600 chr2A 87.000 200 23 2 5869 6067 440925014 440924817 8.190000e-54 222.0
12 TraesCS2B01G289600 chr2A 84.762 210 25 4 5511 5713 654865925 654865716 2.970000e-48 204.0
13 TraesCS2B01G289600 chr2A 90.132 152 15 0 2397 2548 175462267 175462418 1.380000e-46 198.0
14 TraesCS2B01G289600 chr2D 94.074 2987 93 36 2548 5509 332517230 332514303 0.000000e+00 4458.0
15 TraesCS2B01G289600 chr2D 96.356 1811 32 11 617 2397 332519027 332517221 0.000000e+00 2948.0
16 TraesCS2B01G289600 chr2D 90.049 412 39 2 5869 6278 332514119 332513708 3.330000e-147 532.0
17 TraesCS2B01G289600 chr2D 94.426 305 8 3 1 297 332519695 332519392 1.590000e-125 460.0
18 TraesCS2B01G289600 chr2D 100.000 29 0 0 5831 5859 630128855 630128883 3.000000e-03 54.7
19 TraesCS2B01G289600 chr4B 91.928 223 15 2 3423 3645 567379837 567379618 6.110000e-80 309.0
20 TraesCS2B01G289600 chr4B 84.553 246 15 6 3048 3293 567380181 567379959 8.190000e-54 222.0
21 TraesCS2B01G289600 chr7B 97.647 170 3 1 2395 2564 712631890 712632058 2.210000e-74 291.0
22 TraesCS2B01G289600 chr7B 85.377 212 23 5 5511 5715 458798769 458798559 4.930000e-51 213.0
23 TraesCS2B01G289600 chr7B 90.323 155 15 0 2394 2548 704279037 704278883 2.970000e-48 204.0
24 TraesCS2B01G289600 chr7B 89.506 162 13 3 340 498 678130501 678130341 1.070000e-47 202.0
25 TraesCS2B01G289600 chr7B 84.211 209 24 6 5511 5715 700435313 700435110 1.790000e-45 195.0
26 TraesCS2B01G289600 chr7B 90.345 145 12 1 356 498 84113955 84113811 8.310000e-44 189.0
27 TraesCS2B01G289600 chr7B 92.793 111 8 0 494 604 678130312 678130202 1.810000e-35 161.0
28 TraesCS2B01G289600 chr5B 100.000 152 0 0 2398 2549 9618176 9618025 1.330000e-71 281.0
29 TraesCS2B01G289600 chr5B 91.034 145 11 1 356 498 377018289 377018145 1.790000e-45 195.0
30 TraesCS2B01G289600 chr5B 91.538 130 9 2 5585 5714 110436094 110435967 1.800000e-40 178.0
31 TraesCS2B01G289600 chr6D 100.000 151 0 0 2398 2548 284851863 284851713 4.790000e-71 279.0
32 TraesCS2B01G289600 chr4A 100.000 151 0 0 2398 2548 501966324 501966174 4.790000e-71 279.0
33 TraesCS2B01G289600 chr4A 94.444 36 0 2 5825 5859 16881120 16881154 3.000000e-03 54.7
34 TraesCS2B01G289600 chr7A 99.346 153 1 0 2398 2550 519850906 519850754 1.720000e-70 278.0
35 TraesCS2B01G289600 chr7A 85.577 208 23 6 5511 5715 39274859 39275062 1.770000e-50 211.0
36 TraesCS2B01G289600 chr4D 89.238 223 17 5 3423 3645 454658922 454658707 8.020000e-69 272.0
37 TraesCS2B01G289600 chr4D 85.366 246 13 6 3048 3293 454659266 454659044 3.780000e-57 233.0
38 TraesCS2B01G289600 chr4D 92.661 109 8 0 494 602 487162824 487162932 2.340000e-34 158.0
39 TraesCS2B01G289600 chr4D 86.957 115 9 6 5506 5619 21890199 21890308 2.380000e-24 124.0
40 TraesCS2B01G289600 chr3B 98.693 153 2 0 2396 2548 378720273 378720121 8.020000e-69 272.0
41 TraesCS2B01G289600 chr3B 90.345 145 12 1 356 498 719547687 719547543 8.310000e-44 189.0
42 TraesCS2B01G289600 chr3B 82.297 209 26 9 5511 5715 707272877 707272676 3.010000e-38 171.0
43 TraesCS2B01G289600 chr3B 93.578 109 7 0 494 602 698421182 698421074 5.040000e-36 163.0
44 TraesCS2B01G289600 chr3B 84.034 119 13 5 5487 5602 496853837 496853952 6.650000e-20 110.0
45 TraesCS2B01G289600 chr3B 90.476 42 2 2 5819 5859 815459914 815459954 3.000000e-03 54.7
46 TraesCS2B01G289600 chr5A 87.204 211 21 3 5509 5713 22736714 22736924 1.050000e-57 235.0
47 TraesCS2B01G289600 chr5A 100.000 29 0 0 5831 5859 322839344 322839316 3.000000e-03 54.7
48 TraesCS2B01G289600 chr6A 87.019 208 23 3 5511 5715 6375137 6375343 1.360000e-56 231.0
49 TraesCS2B01G289600 chr6A 100.000 29 0 0 5831 5859 61890490 61890462 3.000000e-03 54.7
50 TraesCS2B01G289600 chr6B 90.728 151 8 5 356 503 678804515 678804368 4.970000e-46 196.0
51 TraesCS2B01G289600 chr6B 87.647 170 15 5 353 520 206022620 206022785 6.420000e-45 193.0
52 TraesCS2B01G289600 chr6B 92.373 118 9 0 494 611 620998682 620998799 1.080000e-37 169.0
53 TraesCS2B01G289600 chr6B 92.661 109 8 0 494 602 149061112 149061220 2.340000e-34 158.0
54 TraesCS2B01G289600 chr6B 91.964 112 9 0 494 605 460510297 460510186 2.340000e-34 158.0
55 TraesCS2B01G289600 chr6B 97.297 37 0 1 5831 5866 68208072 68208036 1.890000e-05 62.1
56 TraesCS2B01G289600 chr6B 90.698 43 3 1 5831 5872 452164545 452164503 8.790000e-04 56.5
57 TraesCS2B01G289600 chr1B 91.034 145 11 2 353 495 499655859 499656003 1.790000e-45 195.0
58 TraesCS2B01G289600 chr3D 88.276 145 14 3 5602 5746 21444209 21444068 3.010000e-38 171.0
59 TraesCS2B01G289600 chr3D 97.222 36 0 1 5831 5865 545974149 545974114 6.800000e-05 60.2
60 TraesCS2B01G289600 chr1D 92.661 109 8 0 494 602 443529467 443529575 2.340000e-34 158.0
61 TraesCS2B01G289600 chr5D 92.708 96 6 1 5511 5605 204114229 204114134 3.050000e-28 137.0
62 TraesCS2B01G289600 chr5D 94.595 37 1 1 5831 5866 399940455 399940419 8.790000e-04 56.5
63 TraesCS2B01G289600 chr3A 96.970 33 0 1 5828 5859 100759139 100759171 3.000000e-03 54.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G289600 chr2B 400621694 400627971 6277 True 11594.00 11594 100.00000 1 6278 1 chr2B.!!$R3 6277
1 TraesCS2B01G289600 chr2B 400603850 400605294 1444 False 2386.00 2386 96.47300 4095 5540 1 chr2B.!!$F1 1445
2 TraesCS2B01G289600 chr2A 440924817 440930432 5615 True 2059.25 4510 92.81650 1 6067 4 chr2A.!!$R2 6066
3 TraesCS2B01G289600 chr2D 332513708 332519695 5987 True 2099.50 4458 93.72625 1 6278 4 chr2D.!!$R1 6277
4 TraesCS2B01G289600 chr4B 567379618 567380181 563 True 265.50 309 88.24050 3048 3645 2 chr4B.!!$R1 597
5 TraesCS2B01G289600 chr4D 454658707 454659266 559 True 252.50 272 87.30200 3048 3645 2 chr4D.!!$R1 597


AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
614 919 0.106335 ATGCCCTGAGAATGAGAGCG 59.894 55.0 0.0 0.0 0.00 5.03 F
2531 2881 0.100682 AATCGTCTGCTATGCGTCGT 59.899 50.0 0.0 0.0 0.00 4.34 F
2761 3115 0.101939 GCACCACTAGCCCGTAGTAC 59.898 60.0 0.0 0.0 40.27 2.73 F
4071 4517 0.112218 TTGCAGGCTTCTTGGGCTTA 59.888 50.0 0.0 0.0 40.17 3.09 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2551 2901 0.040204 AGGGGGAGGCATGTTTCTTG 59.960 55.0 0.0 0.0 0.0 3.02 R
3946 4392 0.181350 GAAGGGGAGCACGGATCATT 59.819 55.0 0.0 0.0 0.0 2.57 R
4535 4981 0.040958 GAGCACGAACCTGTTGCAAG 60.041 55.0 0.0 0.0 0.0 4.01 R
5636 6088 0.035317 TCAAGTTCTGGTGCTCGCAT 59.965 50.0 0.0 0.0 0.0 4.73 R


All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
47 48 3.629398 AGCTGAGTTCAAAACAAGAGTGG 59.371 43.478 0.00 0.00 0.00 4.00
49 50 2.687935 TGAGTTCAAAACAAGAGTGGGC 59.312 45.455 0.00 0.00 0.00 5.36
139 149 1.449601 GCGGAGTGGTACATGTGGG 60.450 63.158 9.11 0.00 44.52 4.61
334 352 1.452289 CGCGGAGGGAAGAGAGAGA 60.452 63.158 0.00 0.00 46.37 3.10
343 361 2.029470 GGGAAGAGAGAGAGTGTGTGTG 60.029 54.545 0.00 0.00 0.00 3.82
346 651 1.959985 AGAGAGAGAGTGTGTGTGTGG 59.040 52.381 0.00 0.00 0.00 4.17
354 659 1.156736 GTGTGTGTGTGGGTATGAGC 58.843 55.000 0.00 0.00 0.00 4.26
357 662 1.375396 GTGTGTGGGTATGAGCGCA 60.375 57.895 11.47 0.00 0.00 6.09
358 663 0.744414 GTGTGTGGGTATGAGCGCAT 60.744 55.000 11.47 8.35 38.54 4.73
359 664 0.461870 TGTGTGGGTATGAGCGCATC 60.462 55.000 11.47 4.91 35.94 3.91
360 665 0.179073 GTGTGGGTATGAGCGCATCT 60.179 55.000 11.47 0.00 35.94 2.90
361 666 0.541392 TGTGGGTATGAGCGCATCTT 59.459 50.000 11.47 5.37 35.94 2.40
362 667 1.221414 GTGGGTATGAGCGCATCTTC 58.779 55.000 11.47 0.00 35.94 2.87
363 668 0.829990 TGGGTATGAGCGCATCTTCA 59.170 50.000 11.47 4.51 35.94 3.02
364 669 1.209261 TGGGTATGAGCGCATCTTCAA 59.791 47.619 11.47 0.00 35.94 2.69
365 670 1.599542 GGGTATGAGCGCATCTTCAAC 59.400 52.381 11.47 0.00 35.94 3.18
366 671 2.279741 GGTATGAGCGCATCTTCAACA 58.720 47.619 11.47 0.00 35.94 3.33
367 672 2.286294 GGTATGAGCGCATCTTCAACAG 59.714 50.000 11.47 0.00 35.94 3.16
368 673 2.105006 ATGAGCGCATCTTCAACAGT 57.895 45.000 11.47 0.00 0.00 3.55
369 674 1.432514 TGAGCGCATCTTCAACAGTC 58.567 50.000 11.47 0.00 0.00 3.51
370 675 0.368227 GAGCGCATCTTCAACAGTCG 59.632 55.000 11.47 0.00 0.00 4.18
371 676 0.319900 AGCGCATCTTCAACAGTCGT 60.320 50.000 11.47 0.00 0.00 4.34
372 677 1.067846 AGCGCATCTTCAACAGTCGTA 60.068 47.619 11.47 0.00 0.00 3.43
373 678 1.724623 GCGCATCTTCAACAGTCGTAA 59.275 47.619 0.30 0.00 0.00 3.18
374 679 2.222596 GCGCATCTTCAACAGTCGTAAG 60.223 50.000 0.30 0.00 0.00 2.34
394 699 9.661563 TCGTAAGATAGGTGTTTGATAATTTGT 57.338 29.630 0.00 0.00 45.01 2.83
395 700 9.916397 CGTAAGATAGGTGTTTGATAATTTGTC 57.084 33.333 0.00 0.00 43.02 3.18
399 704 9.911788 AGATAGGTGTTTGATAATTTGTCATCT 57.088 29.630 0.00 0.00 0.00 2.90
403 708 9.739276 AGGTGTTTGATAATTTGTCATCTAGAA 57.261 29.630 0.00 0.00 0.00 2.10
404 709 9.774742 GGTGTTTGATAATTTGTCATCTAGAAC 57.225 33.333 0.00 0.00 0.00 3.01
416 721 9.538508 TTTGTCATCTAGAACATAGTGATGATG 57.461 33.333 0.00 0.00 43.22 3.07
417 722 8.242729 TGTCATCTAGAACATAGTGATGATGT 57.757 34.615 0.00 0.00 43.22 3.06
418 723 8.139989 TGTCATCTAGAACATAGTGATGATGTG 58.860 37.037 0.00 0.00 43.22 3.21
419 724 8.355913 GTCATCTAGAACATAGTGATGATGTGA 58.644 37.037 0.00 0.00 43.22 3.58
420 725 8.355913 TCATCTAGAACATAGTGATGATGTGAC 58.644 37.037 0.00 0.00 38.67 3.67
421 726 7.645058 TCTAGAACATAGTGATGATGTGACA 57.355 36.000 0.00 0.00 37.59 3.58
422 727 8.242729 TCTAGAACATAGTGATGATGTGACAT 57.757 34.615 0.00 0.00 37.59 3.06
423 728 9.354673 TCTAGAACATAGTGATGATGTGACATA 57.645 33.333 0.00 0.00 37.59 2.29
457 762 6.842437 AGAGAGAGCAAAGTTGTATGTAGA 57.158 37.500 0.00 0.00 0.00 2.59
458 763 7.416964 AGAGAGAGCAAAGTTGTATGTAGAT 57.583 36.000 0.00 0.00 0.00 1.98
459 764 7.846066 AGAGAGAGCAAAGTTGTATGTAGATT 58.154 34.615 0.00 0.00 0.00 2.40
460 765 8.972127 AGAGAGAGCAAAGTTGTATGTAGATTA 58.028 33.333 0.00 0.00 0.00 1.75
461 766 9.587772 GAGAGAGCAAAGTTGTATGTAGATTAA 57.412 33.333 0.00 0.00 0.00 1.40
464 769 9.890629 AGAGCAAAGTTGTATGTAGATTAATCA 57.109 29.630 17.56 0.00 0.00 2.57
478 783 9.237187 TGTAGATTAATCAATAACCTTTGCACA 57.763 29.630 17.56 0.00 0.00 4.57
481 786 7.761249 AGATTAATCAATAACCTTTGCACAAGC 59.239 33.333 17.56 0.00 42.57 4.01
482 787 5.473066 AATCAATAACCTTTGCACAAGCT 57.527 34.783 0.00 0.00 42.74 3.74
483 788 4.503741 TCAATAACCTTTGCACAAGCTC 57.496 40.909 0.00 0.00 42.74 4.09
484 789 3.255642 TCAATAACCTTTGCACAAGCTCC 59.744 43.478 0.00 0.00 42.74 4.70
485 790 2.356665 TAACCTTTGCACAAGCTCCA 57.643 45.000 0.00 0.00 42.74 3.86
486 791 1.484038 AACCTTTGCACAAGCTCCAA 58.516 45.000 0.00 0.00 42.74 3.53
487 792 1.035139 ACCTTTGCACAAGCTCCAAG 58.965 50.000 0.00 0.00 42.74 3.61
488 793 0.316204 CCTTTGCACAAGCTCCAAGG 59.684 55.000 0.00 0.00 42.74 3.61
489 794 1.035139 CTTTGCACAAGCTCCAAGGT 58.965 50.000 0.00 0.00 42.74 3.50
490 795 0.746063 TTTGCACAAGCTCCAAGGTG 59.254 50.000 0.00 0.00 42.74 4.00
491 796 0.106769 TTGCACAAGCTCCAAGGTGA 60.107 50.000 0.00 0.00 42.74 4.02
492 797 0.106769 TGCACAAGCTCCAAGGTGAA 60.107 50.000 0.00 0.00 42.74 3.18
493 798 1.032014 GCACAAGCTCCAAGGTGAAA 58.968 50.000 0.00 0.00 37.91 2.69
494 799 1.615392 GCACAAGCTCCAAGGTGAAAT 59.385 47.619 0.00 0.00 37.91 2.17
495 800 2.036346 GCACAAGCTCCAAGGTGAAATT 59.964 45.455 0.00 0.00 37.91 1.82
496 801 3.645884 CACAAGCTCCAAGGTGAAATTG 58.354 45.455 0.00 0.00 33.16 2.32
497 802 3.318839 CACAAGCTCCAAGGTGAAATTGA 59.681 43.478 0.00 0.00 33.16 2.57
498 803 3.960102 ACAAGCTCCAAGGTGAAATTGAA 59.040 39.130 0.00 0.00 0.00 2.69
499 804 4.590222 ACAAGCTCCAAGGTGAAATTGAAT 59.410 37.500 0.00 0.00 0.00 2.57
500 805 5.774690 ACAAGCTCCAAGGTGAAATTGAATA 59.225 36.000 0.00 0.00 0.00 1.75
501 806 6.071728 ACAAGCTCCAAGGTGAAATTGAATAG 60.072 38.462 0.00 0.00 0.00 1.73
502 807 4.400567 AGCTCCAAGGTGAAATTGAATAGC 59.599 41.667 0.00 0.00 32.55 2.97
503 808 4.400567 GCTCCAAGGTGAAATTGAATAGCT 59.599 41.667 0.00 0.00 31.11 3.32
504 809 5.105595 GCTCCAAGGTGAAATTGAATAGCTT 60.106 40.000 0.00 0.00 31.11 3.74
505 810 6.095440 GCTCCAAGGTGAAATTGAATAGCTTA 59.905 38.462 0.00 0.00 31.11 3.09
506 811 7.391148 TCCAAGGTGAAATTGAATAGCTTAC 57.609 36.000 0.00 0.00 30.56 2.34
507 812 6.945435 TCCAAGGTGAAATTGAATAGCTTACA 59.055 34.615 0.00 0.00 30.56 2.41
508 813 7.615365 TCCAAGGTGAAATTGAATAGCTTACAT 59.385 33.333 0.00 0.00 30.56 2.29
509 814 8.902806 CCAAGGTGAAATTGAATAGCTTACATA 58.097 33.333 0.00 0.00 30.56 2.29
510 815 9.722056 CAAGGTGAAATTGAATAGCTTACATAC 57.278 33.333 0.00 0.00 30.56 2.39
511 816 9.461312 AAGGTGAAATTGAATAGCTTACATACA 57.539 29.630 0.00 0.00 0.00 2.29
512 817 9.461312 AGGTGAAATTGAATAGCTTACATACAA 57.539 29.630 0.00 0.00 0.00 2.41
542 847 9.672673 ATTGAAGTAGTTGTATGATAGCTTGTT 57.327 29.630 0.00 0.00 0.00 2.83
543 848 8.479313 TGAAGTAGTTGTATGATAGCTTGTTG 57.521 34.615 0.00 0.00 0.00 3.33
544 849 7.549134 TGAAGTAGTTGTATGATAGCTTGTTGG 59.451 37.037 0.00 0.00 0.00 3.77
545 850 6.947464 AGTAGTTGTATGATAGCTTGTTGGT 58.053 36.000 0.00 0.00 0.00 3.67
546 851 7.394816 AGTAGTTGTATGATAGCTTGTTGGTT 58.605 34.615 0.00 0.00 0.00 3.67
547 852 6.500684 AGTTGTATGATAGCTTGTTGGTTG 57.499 37.500 0.00 0.00 0.00 3.77
548 853 6.237901 AGTTGTATGATAGCTTGTTGGTTGA 58.762 36.000 0.00 0.00 0.00 3.18
549 854 6.886459 AGTTGTATGATAGCTTGTTGGTTGAT 59.114 34.615 0.00 0.00 0.00 2.57
550 855 6.682423 TGTATGATAGCTTGTTGGTTGATG 57.318 37.500 0.00 0.00 0.00 3.07
551 856 6.413892 TGTATGATAGCTTGTTGGTTGATGA 58.586 36.000 0.00 0.00 0.00 2.92
552 857 5.824904 ATGATAGCTTGTTGGTTGATGAC 57.175 39.130 0.00 0.00 0.00 3.06
553 858 4.650734 TGATAGCTTGTTGGTTGATGACA 58.349 39.130 0.00 0.00 0.00 3.58
554 859 5.255687 TGATAGCTTGTTGGTTGATGACAT 58.744 37.500 0.00 0.00 0.00 3.06
555 860 3.928727 AGCTTGTTGGTTGATGACATG 57.071 42.857 0.00 0.00 0.00 3.21
556 861 3.489355 AGCTTGTTGGTTGATGACATGA 58.511 40.909 0.00 0.00 0.00 3.07
557 862 3.890756 AGCTTGTTGGTTGATGACATGAA 59.109 39.130 0.00 0.00 0.00 2.57
558 863 4.525487 AGCTTGTTGGTTGATGACATGAAT 59.475 37.500 0.00 0.00 0.00 2.57
559 864 5.711506 AGCTTGTTGGTTGATGACATGAATA 59.288 36.000 0.00 0.00 0.00 1.75
560 865 6.379133 AGCTTGTTGGTTGATGACATGAATAT 59.621 34.615 0.00 0.00 0.00 1.28
561 866 7.037438 GCTTGTTGGTTGATGACATGAATATT 58.963 34.615 0.00 0.00 0.00 1.28
562 867 7.546667 GCTTGTTGGTTGATGACATGAATATTT 59.453 33.333 0.00 0.00 0.00 1.40
563 868 9.426837 CTTGTTGGTTGATGACATGAATATTTT 57.573 29.630 0.00 0.00 0.00 1.82
565 870 9.853555 TGTTGGTTGATGACATGAATATTTTAC 57.146 29.630 0.00 0.00 0.00 2.01
566 871 9.301153 GTTGGTTGATGACATGAATATTTTACC 57.699 33.333 0.00 0.00 0.00 2.85
567 872 8.586879 TGGTTGATGACATGAATATTTTACCA 57.413 30.769 0.00 0.63 0.00 3.25
568 873 9.029368 TGGTTGATGACATGAATATTTTACCAA 57.971 29.630 0.00 0.00 0.00 3.67
569 874 9.301153 GGTTGATGACATGAATATTTTACCAAC 57.699 33.333 0.00 0.00 0.00 3.77
570 875 9.853555 GTTGATGACATGAATATTTTACCAACA 57.146 29.630 0.00 0.00 0.00 3.33
573 878 8.931385 ATGACATGAATATTTTACCAACAAGC 57.069 30.769 0.00 0.00 0.00 4.01
574 879 7.319646 TGACATGAATATTTTACCAACAAGCC 58.680 34.615 0.00 0.00 0.00 4.35
575 880 7.178274 TGACATGAATATTTTACCAACAAGCCT 59.822 33.333 0.00 0.00 0.00 4.58
576 881 8.588290 ACATGAATATTTTACCAACAAGCCTA 57.412 30.769 0.00 0.00 0.00 3.93
577 882 9.030452 ACATGAATATTTTACCAACAAGCCTAA 57.970 29.630 0.00 0.00 0.00 2.69
578 883 9.301153 CATGAATATTTTACCAACAAGCCTAAC 57.699 33.333 0.00 0.00 0.00 2.34
579 884 8.410673 TGAATATTTTACCAACAAGCCTAACA 57.589 30.769 0.00 0.00 0.00 2.41
580 885 9.030452 TGAATATTTTACCAACAAGCCTAACAT 57.970 29.630 0.00 0.00 0.00 2.71
583 888 7.768807 ATTTTACCAACAAGCCTAACATACA 57.231 32.000 0.00 0.00 0.00 2.29
584 889 7.584122 TTTTACCAACAAGCCTAACATACAA 57.416 32.000 0.00 0.00 0.00 2.41
585 890 6.563222 TTACCAACAAGCCTAACATACAAC 57.437 37.500 0.00 0.00 0.00 3.32
586 891 3.824443 ACCAACAAGCCTAACATACAACC 59.176 43.478 0.00 0.00 0.00 3.77
587 892 4.079253 CCAACAAGCCTAACATACAACCT 58.921 43.478 0.00 0.00 0.00 3.50
588 893 4.082787 CCAACAAGCCTAACATACAACCTG 60.083 45.833 0.00 0.00 0.00 4.00
589 894 4.367039 ACAAGCCTAACATACAACCTGT 57.633 40.909 0.00 0.00 0.00 4.00
590 895 4.725490 ACAAGCCTAACATACAACCTGTT 58.275 39.130 0.00 0.00 39.93 3.16
591 896 5.871834 ACAAGCCTAACATACAACCTGTTA 58.128 37.500 0.00 0.00 37.89 2.41
592 897 6.300703 ACAAGCCTAACATACAACCTGTTAA 58.699 36.000 0.00 0.00 38.30 2.01
593 898 6.773685 ACAAGCCTAACATACAACCTGTTAAA 59.226 34.615 0.00 0.00 38.30 1.52
594 899 7.040686 ACAAGCCTAACATACAACCTGTTAAAG 60.041 37.037 0.00 0.00 38.30 1.85
595 900 6.775708 AGCCTAACATACAACCTGTTAAAGA 58.224 36.000 0.00 0.00 38.30 2.52
596 901 7.402862 AGCCTAACATACAACCTGTTAAAGAT 58.597 34.615 0.00 0.00 38.30 2.40
597 902 7.336931 AGCCTAACATACAACCTGTTAAAGATG 59.663 37.037 0.00 0.00 38.30 2.90
598 903 7.472543 CCTAACATACAACCTGTTAAAGATGC 58.527 38.462 0.00 0.00 38.30 3.91
599 904 5.897377 ACATACAACCTGTTAAAGATGCC 57.103 39.130 0.00 0.00 0.00 4.40
600 905 4.705023 ACATACAACCTGTTAAAGATGCCC 59.295 41.667 0.00 0.00 0.00 5.36
601 906 3.525800 ACAACCTGTTAAAGATGCCCT 57.474 42.857 0.00 0.00 0.00 5.19
602 907 3.157087 ACAACCTGTTAAAGATGCCCTG 58.843 45.455 0.00 0.00 0.00 4.45
603 908 3.181434 ACAACCTGTTAAAGATGCCCTGA 60.181 43.478 0.00 0.00 0.00 3.86
604 909 3.356529 ACCTGTTAAAGATGCCCTGAG 57.643 47.619 0.00 0.00 0.00 3.35
605 910 2.912956 ACCTGTTAAAGATGCCCTGAGA 59.087 45.455 0.00 0.00 0.00 3.27
606 911 3.330701 ACCTGTTAAAGATGCCCTGAGAA 59.669 43.478 0.00 0.00 0.00 2.87
607 912 4.018050 ACCTGTTAAAGATGCCCTGAGAAT 60.018 41.667 0.00 0.00 0.00 2.40
608 913 4.337555 CCTGTTAAAGATGCCCTGAGAATG 59.662 45.833 0.00 0.00 0.00 2.67
609 914 5.178096 TGTTAAAGATGCCCTGAGAATGA 57.822 39.130 0.00 0.00 0.00 2.57
614 919 0.106335 ATGCCCTGAGAATGAGAGCG 59.894 55.000 0.00 0.00 0.00 5.03
615 920 1.227497 GCCCTGAGAATGAGAGCGG 60.227 63.158 0.00 0.00 0.00 5.52
788 1126 0.322906 AAAGAAGGCAGCAGCTACCC 60.323 55.000 8.21 5.62 41.70 3.69
789 1127 1.492133 AAGAAGGCAGCAGCTACCCA 61.492 55.000 8.21 0.00 41.70 4.51
790 1128 1.002134 GAAGGCAGCAGCTACCCAA 60.002 57.895 8.21 0.00 41.70 4.12
791 1129 1.001641 AAGGCAGCAGCTACCCAAG 60.002 57.895 8.21 0.00 41.70 3.61
2402 2752 2.716398 GTGAGCAACCAAGAACGAAAC 58.284 47.619 0.00 0.00 0.00 2.78
2403 2753 2.354821 GTGAGCAACCAAGAACGAAACT 59.645 45.455 0.00 0.00 0.00 2.66
2404 2754 2.354510 TGAGCAACCAAGAACGAAACTG 59.645 45.455 0.00 0.00 0.00 3.16
2405 2755 1.065551 AGCAACCAAGAACGAAACTGC 59.934 47.619 0.00 0.00 0.00 4.40
2406 2756 1.065551 GCAACCAAGAACGAAACTGCT 59.934 47.619 0.00 0.00 0.00 4.24
2407 2757 2.289547 GCAACCAAGAACGAAACTGCTA 59.710 45.455 0.00 0.00 0.00 3.49
2408 2758 3.058224 GCAACCAAGAACGAAACTGCTAT 60.058 43.478 0.00 0.00 0.00 2.97
2409 2759 4.466828 CAACCAAGAACGAAACTGCTATG 58.533 43.478 0.00 0.00 0.00 2.23
2410 2760 2.484264 ACCAAGAACGAAACTGCTATGC 59.516 45.455 0.00 0.00 0.00 3.14
2411 2761 2.483877 CCAAGAACGAAACTGCTATGCA 59.516 45.455 0.00 0.00 36.92 3.96
2437 2787 3.128259 CACTACATGCACGACAGCT 57.872 52.632 0.00 0.00 34.99 4.24
2438 2788 0.717784 CACTACATGCACGACAGCTG 59.282 55.000 13.48 13.48 34.99 4.24
2439 2789 1.016130 ACTACATGCACGACAGCTGC 61.016 55.000 15.27 5.81 34.99 5.25
2443 2793 4.583866 TGCACGACAGCTGCACGA 62.584 61.111 30.57 13.14 39.76 4.35
2444 2794 3.114616 GCACGACAGCTGCACGAT 61.115 61.111 30.57 17.14 34.56 3.73
2445 2795 2.774126 CACGACAGCTGCACGATG 59.226 61.111 30.57 22.23 34.52 3.84
2446 2796 2.023771 CACGACAGCTGCACGATGT 61.024 57.895 30.57 13.14 46.62 3.06
2449 2799 4.777384 ACAGCTGCACGATGTCAA 57.223 50.000 15.27 0.00 37.86 3.18
2450 2800 3.238232 ACAGCTGCACGATGTCAAT 57.762 47.368 15.27 0.00 37.86 2.57
2451 2801 1.081892 ACAGCTGCACGATGTCAATC 58.918 50.000 15.27 0.00 37.86 2.67
2452 2802 1.338484 ACAGCTGCACGATGTCAATCT 60.338 47.619 15.27 0.00 37.86 2.40
2453 2803 2.094026 ACAGCTGCACGATGTCAATCTA 60.094 45.455 15.27 0.00 37.86 1.98
2454 2804 2.538861 CAGCTGCACGATGTCAATCTAG 59.461 50.000 0.00 0.00 0.00 2.43
2455 2805 1.260033 GCTGCACGATGTCAATCTAGC 59.740 52.381 0.00 0.00 33.38 3.42
2456 2806 1.863454 CTGCACGATGTCAATCTAGCC 59.137 52.381 0.00 0.00 32.39 3.93
2457 2807 1.206849 TGCACGATGTCAATCTAGCCA 59.793 47.619 0.00 0.00 32.39 4.75
2458 2808 2.158914 TGCACGATGTCAATCTAGCCAT 60.159 45.455 0.00 0.00 32.39 4.40
2459 2809 2.478134 GCACGATGTCAATCTAGCCATC 59.522 50.000 0.00 0.00 0.00 3.51
2460 2810 3.801638 GCACGATGTCAATCTAGCCATCT 60.802 47.826 0.00 0.00 33.24 2.90
2461 2811 3.739810 CACGATGTCAATCTAGCCATCTG 59.260 47.826 0.00 0.00 33.24 2.90
2462 2812 3.386078 ACGATGTCAATCTAGCCATCTGT 59.614 43.478 0.00 0.00 33.24 3.41
2463 2813 4.141846 ACGATGTCAATCTAGCCATCTGTT 60.142 41.667 0.00 0.00 33.24 3.16
2464 2814 4.210746 CGATGTCAATCTAGCCATCTGTTG 59.789 45.833 0.00 0.00 33.24 3.33
2465 2815 3.273434 TGTCAATCTAGCCATCTGTTGC 58.727 45.455 0.00 0.00 0.00 4.17
2466 2816 3.273434 GTCAATCTAGCCATCTGTTGCA 58.727 45.455 0.00 0.00 0.00 4.08
2467 2817 3.064545 GTCAATCTAGCCATCTGTTGCAC 59.935 47.826 0.00 0.00 0.00 4.57
2468 2818 3.054875 TCAATCTAGCCATCTGTTGCACT 60.055 43.478 0.00 0.00 0.00 4.40
2469 2819 3.641434 ATCTAGCCATCTGTTGCACTT 57.359 42.857 0.00 0.00 0.00 3.16
2470 2820 4.760530 ATCTAGCCATCTGTTGCACTTA 57.239 40.909 0.00 0.00 0.00 2.24
2471 2821 4.128925 TCTAGCCATCTGTTGCACTTAG 57.871 45.455 0.00 0.00 0.00 2.18
2472 2822 3.769300 TCTAGCCATCTGTTGCACTTAGA 59.231 43.478 0.00 0.00 0.00 2.10
2473 2823 3.641434 AGCCATCTGTTGCACTTAGAT 57.359 42.857 0.00 0.00 0.00 1.98
2474 2824 4.760530 AGCCATCTGTTGCACTTAGATA 57.239 40.909 6.30 0.00 30.43 1.98
2475 2825 5.102953 AGCCATCTGTTGCACTTAGATAA 57.897 39.130 6.30 0.00 30.43 1.75
2476 2826 5.688807 AGCCATCTGTTGCACTTAGATAAT 58.311 37.500 6.30 0.00 30.43 1.28
2477 2827 6.830912 AGCCATCTGTTGCACTTAGATAATA 58.169 36.000 6.30 0.00 30.43 0.98
2478 2828 7.456725 AGCCATCTGTTGCACTTAGATAATAT 58.543 34.615 6.30 0.00 30.43 1.28
2479 2829 7.389884 AGCCATCTGTTGCACTTAGATAATATG 59.610 37.037 6.30 0.00 30.43 1.78
2480 2830 7.524912 CCATCTGTTGCACTTAGATAATATGC 58.475 38.462 6.30 0.00 36.81 3.14
2481 2831 7.173735 CCATCTGTTGCACTTAGATAATATGCA 59.826 37.037 6.30 0.00 44.19 3.96
2482 2832 7.482654 TCTGTTGCACTTAGATAATATGCAC 57.517 36.000 9.84 7.39 45.45 4.57
2483 2833 6.200854 TCTGTTGCACTTAGATAATATGCACG 59.799 38.462 9.84 0.00 45.45 5.34
2484 2834 5.236263 TGTTGCACTTAGATAATATGCACGG 59.764 40.000 9.84 0.00 45.45 4.94
2485 2835 5.208463 TGCACTTAGATAATATGCACGGA 57.792 39.130 0.00 0.00 41.18 4.69
2486 2836 4.988540 TGCACTTAGATAATATGCACGGAC 59.011 41.667 0.00 0.00 41.18 4.79
2487 2837 4.090066 GCACTTAGATAATATGCACGGACG 59.910 45.833 0.00 0.00 36.30 4.79
2488 2838 4.090066 CACTTAGATAATATGCACGGACGC 59.910 45.833 0.00 0.00 0.00 5.19
2490 2840 2.404215 AGATAATATGCACGGACGCAC 58.596 47.619 0.00 0.00 46.56 5.34
2491 2841 2.035961 AGATAATATGCACGGACGCACT 59.964 45.455 0.00 0.00 46.56 4.40
2492 2842 1.566404 TAATATGCACGGACGCACTG 58.434 50.000 0.00 0.00 46.56 3.66
2493 2843 0.108377 AATATGCACGGACGCACTGA 60.108 50.000 0.00 0.00 46.56 3.41
2494 2844 0.104855 ATATGCACGGACGCACTGAT 59.895 50.000 0.00 0.00 46.56 2.90
2495 2845 0.805711 TATGCACGGACGCACTGATG 60.806 55.000 0.00 0.00 46.56 3.07
2496 2846 2.738521 GCACGGACGCACTGATGT 60.739 61.111 0.00 0.00 0.00 3.06
2497 2847 3.015293 GCACGGACGCACTGATGTG 62.015 63.158 0.00 0.00 46.37 3.21
2508 2858 1.325640 CACTGATGTGCTGTATCGTGC 59.674 52.381 0.00 0.00 37.38 5.34
2509 2859 1.066929 ACTGATGTGCTGTATCGTGCA 60.067 47.619 0.00 0.00 36.79 4.57
2516 2866 1.393196 TGCTGTATCGTGCACAAATCG 59.607 47.619 18.64 1.94 33.94 3.34
2517 2867 1.393539 GCTGTATCGTGCACAAATCGT 59.606 47.619 18.64 0.00 0.00 3.73
2518 2868 2.534939 GCTGTATCGTGCACAAATCGTC 60.535 50.000 18.64 5.17 0.00 4.20
2519 2869 2.923655 CTGTATCGTGCACAAATCGTCT 59.076 45.455 18.64 0.00 0.00 4.18
2520 2870 2.666022 TGTATCGTGCACAAATCGTCTG 59.334 45.455 18.64 0.00 0.00 3.51
2521 2871 0.443869 ATCGTGCACAAATCGTCTGC 59.556 50.000 18.64 0.00 0.00 4.26
2522 2872 0.599991 TCGTGCACAAATCGTCTGCT 60.600 50.000 18.64 0.00 0.00 4.24
2523 2873 1.067693 CGTGCACAAATCGTCTGCTA 58.932 50.000 18.64 0.00 0.00 3.49
2524 2874 1.660607 CGTGCACAAATCGTCTGCTAT 59.339 47.619 18.64 0.00 0.00 2.97
2525 2875 2.535534 CGTGCACAAATCGTCTGCTATG 60.536 50.000 18.64 0.00 0.00 2.23
2526 2876 1.398041 TGCACAAATCGTCTGCTATGC 59.602 47.619 0.00 0.00 0.00 3.14
2527 2877 1.593070 GCACAAATCGTCTGCTATGCG 60.593 52.381 0.00 0.00 0.00 4.73
2528 2878 1.660607 CACAAATCGTCTGCTATGCGT 59.339 47.619 0.00 0.00 0.00 5.24
2529 2879 1.927174 ACAAATCGTCTGCTATGCGTC 59.073 47.619 0.00 0.00 0.00 5.19
2530 2880 1.071894 CAAATCGTCTGCTATGCGTCG 60.072 52.381 0.00 0.00 0.00 5.12
2531 2881 0.100682 AATCGTCTGCTATGCGTCGT 59.899 50.000 0.00 0.00 0.00 4.34
2532 2882 0.592500 ATCGTCTGCTATGCGTCGTG 60.593 55.000 0.00 0.00 0.00 4.35
2533 2883 1.514228 CGTCTGCTATGCGTCGTGT 60.514 57.895 0.00 0.00 0.00 4.49
2534 2884 1.733416 CGTCTGCTATGCGTCGTGTG 61.733 60.000 0.00 0.00 0.00 3.82
2535 2885 1.805539 TCTGCTATGCGTCGTGTGC 60.806 57.895 0.00 0.00 0.00 4.57
2541 2891 2.048690 TGCGTCGTGTGCATAGCA 60.049 55.556 0.00 0.00 37.44 3.49
2542 2892 2.094066 TGCGTCGTGTGCATAGCAG 61.094 57.895 0.00 0.00 40.08 4.24
2543 2893 2.697425 CGTCGTGTGCATAGCAGC 59.303 61.111 0.00 0.00 40.08 5.25
2544 2894 1.807165 CGTCGTGTGCATAGCAGCT 60.807 57.895 0.00 0.00 40.08 4.24
2545 2895 1.746727 CGTCGTGTGCATAGCAGCTC 61.747 60.000 0.00 0.00 40.08 4.09
2546 2896 0.459237 GTCGTGTGCATAGCAGCTCT 60.459 55.000 0.00 0.00 40.08 4.09
2547 2897 0.179127 TCGTGTGCATAGCAGCTCTC 60.179 55.000 0.00 0.00 40.08 3.20
2548 2898 0.459063 CGTGTGCATAGCAGCTCTCA 60.459 55.000 0.00 0.00 40.08 3.27
2549 2899 1.730501 GTGTGCATAGCAGCTCTCAA 58.269 50.000 0.00 0.00 40.08 3.02
2550 2900 1.396301 GTGTGCATAGCAGCTCTCAAC 59.604 52.381 0.00 0.00 40.08 3.18
2551 2901 1.012841 GTGCATAGCAGCTCTCAACC 58.987 55.000 0.00 0.00 40.08 3.77
2552 2902 0.614812 TGCATAGCAGCTCTCAACCA 59.385 50.000 0.00 0.00 33.32 3.67
2553 2903 1.003464 TGCATAGCAGCTCTCAACCAA 59.997 47.619 0.00 0.00 33.32 3.67
2554 2904 1.669779 GCATAGCAGCTCTCAACCAAG 59.330 52.381 0.00 0.00 0.00 3.61
2555 2905 2.679059 GCATAGCAGCTCTCAACCAAGA 60.679 50.000 0.00 0.00 0.00 3.02
2556 2906 3.603532 CATAGCAGCTCTCAACCAAGAA 58.396 45.455 0.00 0.00 0.00 2.52
2598 2948 2.355197 CATTCCCTTGTCGTGCATGTA 58.645 47.619 5.68 0.00 0.00 2.29
2736 3090 5.008712 ACAAAAACAAGCCAAGCTCTACTAC 59.991 40.000 0.00 0.00 38.25 2.73
2737 3091 4.625607 AAACAAGCCAAGCTCTACTACT 57.374 40.909 0.00 0.00 38.25 2.57
2738 3092 5.740290 AAACAAGCCAAGCTCTACTACTA 57.260 39.130 0.00 0.00 38.25 1.82
2761 3115 0.101939 GCACCACTAGCCCGTAGTAC 59.898 60.000 0.00 0.00 40.27 2.73
2782 3136 7.920160 GTACTATCTGTACCCTCCATACTAC 57.080 44.000 0.00 0.00 44.21 2.73
2869 3224 6.524734 TGAGCTTTCTTGTCATCTAAACTGA 58.475 36.000 0.00 0.00 0.00 3.41
2946 3301 4.081476 TGAGAGACACAGAGAGAGAGAGAG 60.081 50.000 0.00 0.00 0.00 3.20
2947 3302 4.096681 AGAGACACAGAGAGAGAGAGAGA 58.903 47.826 0.00 0.00 0.00 3.10
2963 3318 6.256053 AGAGAGAGATGGAGAGAAAAAGAGT 58.744 40.000 0.00 0.00 0.00 3.24
3022 3377 4.563168 GCAGAGATTCCATCTGATCCGATT 60.563 45.833 7.13 0.00 45.80 3.34
3186 3541 5.981174 TGCACACAAGATCAATCATAGAGA 58.019 37.500 0.00 0.00 0.00 3.10
3187 3542 6.047231 TGCACACAAGATCAATCATAGAGAG 58.953 40.000 0.00 0.00 0.00 3.20
3189 3544 7.147846 TGCACACAAGATCAATCATAGAGAGTA 60.148 37.037 0.00 0.00 0.00 2.59
3191 3546 9.761504 CACACAAGATCAATCATAGAGAGTATT 57.238 33.333 0.00 0.00 0.00 1.89
3367 3786 4.836125 TTTCTGCTTGCTCCTTTTGTAG 57.164 40.909 0.00 0.00 0.00 2.74
3368 3787 3.492102 TCTGCTTGCTCCTTTTGTAGT 57.508 42.857 0.00 0.00 0.00 2.73
3369 3788 3.141398 TCTGCTTGCTCCTTTTGTAGTG 58.859 45.455 0.00 0.00 0.00 2.74
3370 3789 2.880890 CTGCTTGCTCCTTTTGTAGTGT 59.119 45.455 0.00 0.00 0.00 3.55
3371 3790 2.618241 TGCTTGCTCCTTTTGTAGTGTG 59.382 45.455 0.00 0.00 0.00 3.82
3372 3791 2.605580 GCTTGCTCCTTTTGTAGTGTGC 60.606 50.000 0.00 0.00 0.00 4.57
3373 3792 2.638480 TGCTCCTTTTGTAGTGTGCT 57.362 45.000 0.00 0.00 0.00 4.40
3374 3793 2.930950 TGCTCCTTTTGTAGTGTGCTT 58.069 42.857 0.00 0.00 0.00 3.91
3375 3794 2.618241 TGCTCCTTTTGTAGTGTGCTTG 59.382 45.455 0.00 0.00 0.00 4.01
3376 3795 2.618709 GCTCCTTTTGTAGTGTGCTTGT 59.381 45.455 0.00 0.00 0.00 3.16
3377 3796 3.813166 GCTCCTTTTGTAGTGTGCTTGTA 59.187 43.478 0.00 0.00 0.00 2.41
3378 3797 4.319549 GCTCCTTTTGTAGTGTGCTTGTAC 60.320 45.833 0.00 0.00 0.00 2.90
3379 3798 4.131596 TCCTTTTGTAGTGTGCTTGTACC 58.868 43.478 0.00 0.00 0.00 3.34
3391 3810 5.969435 GTGTGCTTGTACCTGTAAAAACTTC 59.031 40.000 0.00 0.00 0.00 3.01
3421 3840 7.537596 AATTGATGGAAACTTTGTCATGGTA 57.462 32.000 0.00 0.00 0.00 3.25
3564 4010 3.847602 CTGGGAGGCGAGCAGGAG 61.848 72.222 0.00 0.00 0.00 3.69
3749 4195 3.450457 ACTAGGAGCAACTTGGAGATCAG 59.550 47.826 0.00 0.00 0.00 2.90
3754 4200 2.902486 AGCAACTTGGAGATCAGACAGA 59.098 45.455 0.00 0.00 0.00 3.41
3760 4206 5.874093 ACTTGGAGATCAGACAGAACATTT 58.126 37.500 0.00 0.00 0.00 2.32
3761 4207 5.936956 ACTTGGAGATCAGACAGAACATTTC 59.063 40.000 0.00 0.00 0.00 2.17
3763 4209 6.058553 TGGAGATCAGACAGAACATTTCAT 57.941 37.500 0.00 0.00 0.00 2.57
3768 4214 5.112220 TCAGACAGAACATTTCATTGCAC 57.888 39.130 0.00 0.00 0.00 4.57
3790 4236 6.906659 CACTTCTTCAAATGTGCTTCATAGT 58.093 36.000 0.00 0.00 35.48 2.12
3796 4242 8.668353 TCTTCAAATGTGCTTCATAGTTCATAC 58.332 33.333 0.00 0.00 35.48 2.39
3804 4250 4.208047 GCTTCATAGTTCATACTCACAGCG 59.792 45.833 0.00 0.00 35.78 5.18
3812 4258 6.810911 AGTTCATACTCACAGCGAAATCTAT 58.189 36.000 0.00 0.00 0.00 1.98
3820 4266 3.127548 CACAGCGAAATCTATGCCAGTTT 59.872 43.478 0.00 0.00 0.00 2.66
3823 4269 4.036027 CAGCGAAATCTATGCCAGTTTGAT 59.964 41.667 0.00 0.00 0.00 2.57
3824 4270 4.641989 AGCGAAATCTATGCCAGTTTGATT 59.358 37.500 0.00 0.00 0.00 2.57
3825 4271 5.126061 AGCGAAATCTATGCCAGTTTGATTT 59.874 36.000 0.00 0.00 39.22 2.17
3826 4272 5.230726 GCGAAATCTATGCCAGTTTGATTTG 59.769 40.000 0.00 0.00 37.44 2.32
3827 4273 6.554419 CGAAATCTATGCCAGTTTGATTTGA 58.446 36.000 0.00 0.00 37.44 2.69
3828 4274 7.028962 CGAAATCTATGCCAGTTTGATTTGAA 58.971 34.615 0.00 0.00 37.44 2.69
3867 4313 7.122650 TCTCCTTTTTATTTGGTGGTGATGATC 59.877 37.037 0.00 0.00 0.00 2.92
3873 4319 0.253113 TGGTGGTGATGATCCAGGGA 60.253 55.000 0.00 0.00 35.49 4.20
4071 4517 0.112218 TTGCAGGCTTCTTGGGCTTA 59.888 50.000 0.00 0.00 40.17 3.09
4078 4524 1.492599 GCTTCTTGGGCTTAGAGGGAT 59.507 52.381 0.00 0.00 0.00 3.85
4085 4531 1.074566 GGGCTTAGAGGGATTGATGGG 59.925 57.143 0.00 0.00 0.00 4.00
4089 4535 1.140312 TAGAGGGATTGATGGGGCAC 58.860 55.000 0.00 0.00 0.00 5.01
4242 4688 2.997897 GGTCGTGCTCAGGGGAGT 60.998 66.667 0.00 0.00 43.37 3.85
4535 4981 3.426568 GAGGGCGTGCAAGCTCAC 61.427 66.667 26.46 16.82 40.85 3.51
5203 5655 1.133482 GGAAGGTGGTGATATTGGGGG 60.133 57.143 0.00 0.00 0.00 5.40
5391 5843 4.398319 TGGACTTGAAATGGAGTCTTTCC 58.602 43.478 3.83 0.00 46.98 3.13
5433 5885 3.680490 TCACATTGTTAAATCGCCTCCA 58.320 40.909 0.00 0.00 0.00 3.86
5508 5960 2.890945 GTTGCAAACCTGGTTGGATAGT 59.109 45.455 18.24 0.00 42.21 2.12
5510 5962 4.584638 TGCAAACCTGGTTGGATAGTAT 57.415 40.909 18.24 0.00 39.71 2.12
5511 5963 4.929479 TGCAAACCTGGTTGGATAGTATT 58.071 39.130 18.24 0.00 39.71 1.89
5512 5964 5.329399 TGCAAACCTGGTTGGATAGTATTT 58.671 37.500 18.24 0.00 39.71 1.40
5513 5965 5.777732 TGCAAACCTGGTTGGATAGTATTTT 59.222 36.000 18.24 0.00 39.71 1.82
5536 5988 5.539582 TTAATACAGTACAAAGGCAAGCG 57.460 39.130 0.00 0.00 0.00 4.68
5537 5989 1.153353 TACAGTACAAAGGCAAGCGC 58.847 50.000 0.00 0.00 37.44 5.92
5538 5990 0.535102 ACAGTACAAAGGCAAGCGCT 60.535 50.000 2.64 2.64 38.60 5.92
5539 5991 0.166814 CAGTACAAAGGCAAGCGCTC 59.833 55.000 12.06 0.00 38.60 5.03
5540 5992 0.035458 AGTACAAAGGCAAGCGCTCT 59.965 50.000 12.06 0.00 38.60 4.09
5541 5993 0.875059 GTACAAAGGCAAGCGCTCTT 59.125 50.000 12.06 7.29 38.60 2.85
5542 5994 2.073816 GTACAAAGGCAAGCGCTCTTA 58.926 47.619 12.06 0.00 38.60 2.10
5543 5995 1.826385 ACAAAGGCAAGCGCTCTTAT 58.174 45.000 12.06 0.00 38.60 1.73
5544 5996 2.985896 ACAAAGGCAAGCGCTCTTATA 58.014 42.857 12.06 0.00 38.60 0.98
5545 5997 2.678336 ACAAAGGCAAGCGCTCTTATAC 59.322 45.455 12.06 0.00 38.60 1.47
5546 5998 2.677836 CAAAGGCAAGCGCTCTTATACA 59.322 45.455 12.06 0.00 38.60 2.29
5548 6000 0.577269 GGCAAGCGCTCTTATACACG 59.423 55.000 12.06 0.00 38.60 4.49
5549 6001 1.278238 GCAAGCGCTCTTATACACGT 58.722 50.000 12.06 0.00 34.30 4.49
5551 6003 1.005975 CAAGCGCTCTTATACACGTGC 60.006 52.381 17.22 0.00 0.00 5.34
5552 6004 0.172578 AGCGCTCTTATACACGTGCA 59.827 50.000 17.22 2.06 35.49 4.57
5553 6005 1.202417 AGCGCTCTTATACACGTGCAT 60.202 47.619 17.22 11.52 35.49 3.96
5554 6006 2.034179 AGCGCTCTTATACACGTGCATA 59.966 45.455 17.22 10.29 35.49 3.14
5555 6007 2.153247 GCGCTCTTATACACGTGCATAC 59.847 50.000 17.22 0.00 33.41 2.39
5556 6008 3.368495 CGCTCTTATACACGTGCATACA 58.632 45.455 17.22 1.06 0.00 2.29
5559 6011 4.441415 GCTCTTATACACGTGCATACACTC 59.559 45.833 17.22 0.00 45.10 3.51
5561 6013 6.144078 TCTTATACACGTGCATACACTCAT 57.856 37.500 17.22 0.00 45.10 2.90
5563 6015 2.010145 ACACGTGCATACACTCATCC 57.990 50.000 17.22 0.00 45.10 3.51
5564 6016 1.550524 ACACGTGCATACACTCATCCT 59.449 47.619 17.22 0.00 45.10 3.24
5565 6017 2.758423 ACACGTGCATACACTCATCCTA 59.242 45.455 17.22 0.00 45.10 2.94
5566 6018 3.384789 ACACGTGCATACACTCATCCTAT 59.615 43.478 17.22 0.00 45.10 2.57
5567 6019 3.737774 CACGTGCATACACTCATCCTATG 59.262 47.826 0.82 0.00 45.10 2.23
5568 6020 3.636764 ACGTGCATACACTCATCCTATGA 59.363 43.478 0.00 0.00 45.10 2.15
5569 6021 4.099419 ACGTGCATACACTCATCCTATGAA 59.901 41.667 0.00 0.00 45.10 2.57
5570 6022 4.445718 CGTGCATACACTCATCCTATGAAC 59.554 45.833 0.00 0.00 45.10 3.18
5571 6023 5.359756 GTGCATACACTCATCCTATGAACA 58.640 41.667 0.00 0.00 43.85 3.18
5572 6024 5.235186 GTGCATACACTCATCCTATGAACAC 59.765 44.000 0.00 0.00 43.85 3.32
5573 6025 5.104982 TGCATACACTCATCCTATGAACACA 60.105 40.000 0.00 0.00 39.11 3.72
5574 6026 5.235186 GCATACACTCATCCTATGAACACAC 59.765 44.000 0.00 0.00 39.11 3.82
5576 6028 4.569943 ACACTCATCCTATGAACACACAC 58.430 43.478 0.00 0.00 39.11 3.82
5577 6029 4.040339 ACACTCATCCTATGAACACACACA 59.960 41.667 0.00 0.00 39.11 3.72
5578 6030 4.389992 CACTCATCCTATGAACACACACAC 59.610 45.833 0.00 0.00 39.11 3.82
5581 6033 1.069358 TCCTATGAACACACACACGCA 59.931 47.619 0.00 0.00 0.00 5.24
5582 6034 1.194547 CCTATGAACACACACACGCAC 59.805 52.381 0.00 0.00 0.00 5.34
5584 6036 0.376852 ATGAACACACACACGCACAC 59.623 50.000 0.00 0.00 0.00 3.82
5585 6037 1.061887 GAACACACACACGCACACC 59.938 57.895 0.00 0.00 0.00 4.16
5586 6038 2.317685 GAACACACACACGCACACCC 62.318 60.000 0.00 0.00 0.00 4.61
5587 6039 2.513666 CACACACACGCACACCCT 60.514 61.111 0.00 0.00 0.00 4.34
5589 6041 1.227438 ACACACACGCACACCCTAC 60.227 57.895 0.00 0.00 0.00 3.18
5590 6042 1.959226 CACACACGCACACCCTACC 60.959 63.158 0.00 0.00 0.00 3.18
5591 6043 2.358247 CACACGCACACCCTACCC 60.358 66.667 0.00 0.00 0.00 3.69
5592 6044 3.633116 ACACGCACACCCTACCCC 61.633 66.667 0.00 0.00 0.00 4.95
5593 6045 3.319198 CACGCACACCCTACCCCT 61.319 66.667 0.00 0.00 0.00 4.79
5594 6046 1.985662 CACGCACACCCTACCCCTA 60.986 63.158 0.00 0.00 0.00 3.53
5596 6048 1.335132 ACGCACACCCTACCCCTATG 61.335 60.000 0.00 0.00 0.00 2.23
5597 6049 1.046472 CGCACACCCTACCCCTATGA 61.046 60.000 0.00 0.00 0.00 2.15
5598 6050 0.759346 GCACACCCTACCCCTATGAG 59.241 60.000 0.00 0.00 0.00 2.90
5600 6052 0.341961 ACACCCTACCCCTATGAGCA 59.658 55.000 0.00 0.00 0.00 4.26
5601 6053 0.759346 CACCCTACCCCTATGAGCAC 59.241 60.000 0.00 0.00 0.00 4.40
5604 6056 1.625818 CCCTACCCCTATGAGCACATC 59.374 57.143 0.00 0.00 37.87 3.06
5605 6057 1.273606 CCTACCCCTATGAGCACATCG 59.726 57.143 0.00 0.00 37.87 3.84
5606 6058 0.679505 TACCCCTATGAGCACATCGC 59.320 55.000 0.00 0.00 42.91 4.58
5608 6060 1.665916 CCCTATGAGCACATCGCCG 60.666 63.158 0.00 0.00 44.04 6.46
5610 6062 1.363807 CTATGAGCACATCGCCGGA 59.636 57.895 5.05 0.00 44.04 5.14
5611 6063 0.249447 CTATGAGCACATCGCCGGAA 60.249 55.000 5.05 0.00 44.04 4.30
5612 6064 0.176910 TATGAGCACATCGCCGGAAA 59.823 50.000 5.05 0.00 44.04 3.13
5613 6065 0.464373 ATGAGCACATCGCCGGAAAT 60.464 50.000 5.05 0.00 44.04 2.17
5616 6068 1.819632 GCACATCGCCGGAAATCCT 60.820 57.895 5.05 0.00 32.94 3.24
5617 6069 2.016961 CACATCGCCGGAAATCCTG 58.983 57.895 5.05 0.00 0.00 3.86
5618 6070 0.461870 CACATCGCCGGAAATCCTGA 60.462 55.000 5.05 0.00 0.00 3.86
5619 6071 0.251916 ACATCGCCGGAAATCCTGAA 59.748 50.000 5.05 0.00 0.00 3.02
5622 6074 2.992124 TCGCCGGAAATCCTGAAATA 57.008 45.000 5.05 0.00 0.00 1.40
5623 6075 3.269538 TCGCCGGAAATCCTGAAATAA 57.730 42.857 5.05 0.00 0.00 1.40
5624 6076 3.815809 TCGCCGGAAATCCTGAAATAAT 58.184 40.909 5.05 0.00 0.00 1.28
5625 6077 4.204012 TCGCCGGAAATCCTGAAATAATT 58.796 39.130 5.05 0.00 0.00 1.40
5626 6078 4.642885 TCGCCGGAAATCCTGAAATAATTT 59.357 37.500 5.05 0.00 0.00 1.82
5627 6079 4.976116 CGCCGGAAATCCTGAAATAATTTC 59.024 41.667 5.05 0.00 38.23 2.17
5628 6080 5.449862 CGCCGGAAATCCTGAAATAATTTCA 60.450 40.000 5.05 0.00 46.68 2.69
5644 6096 9.585099 AAATAATTTCAAGAATAAATGCGAGCA 57.415 25.926 0.00 0.00 0.00 4.26
5645 6097 6.875926 AATTTCAAGAATAAATGCGAGCAC 57.124 33.333 0.00 0.00 0.00 4.40
5646 6098 4.355543 TTCAAGAATAAATGCGAGCACC 57.644 40.909 0.00 0.00 0.00 5.01
5647 6099 3.342719 TCAAGAATAAATGCGAGCACCA 58.657 40.909 0.00 0.00 0.00 4.17
5648 6100 3.374988 TCAAGAATAAATGCGAGCACCAG 59.625 43.478 0.00 0.00 0.00 4.00
5649 6101 3.266510 AGAATAAATGCGAGCACCAGA 57.733 42.857 0.00 0.00 0.00 3.86
5650 6102 3.609853 AGAATAAATGCGAGCACCAGAA 58.390 40.909 0.00 0.00 0.00 3.02
5651 6103 3.375299 AGAATAAATGCGAGCACCAGAAC 59.625 43.478 0.00 0.00 0.00 3.01
5652 6104 2.472695 TAAATGCGAGCACCAGAACT 57.527 45.000 0.00 0.00 0.00 3.01
5653 6105 1.609208 AAATGCGAGCACCAGAACTT 58.391 45.000 0.00 0.00 0.00 2.66
5654 6106 0.877071 AATGCGAGCACCAGAACTTG 59.123 50.000 0.00 0.00 0.00 3.16
5655 6107 0.035317 ATGCGAGCACCAGAACTTGA 59.965 50.000 0.00 0.00 0.00 3.02
5656 6108 0.179059 TGCGAGCACCAGAACTTGAA 60.179 50.000 0.00 0.00 0.00 2.69
5657 6109 0.235926 GCGAGCACCAGAACTTGAAC 59.764 55.000 0.00 0.00 0.00 3.18
5658 6110 0.868406 CGAGCACCAGAACTTGAACC 59.132 55.000 0.00 0.00 0.00 3.62
5675 6127 4.399764 CCTGGTGGGCTGGAGATA 57.600 61.111 0.00 0.00 0.00 1.98
5676 6128 2.859929 CCTGGTGGGCTGGAGATAT 58.140 57.895 0.00 0.00 0.00 1.63
5677 6129 0.689623 CCTGGTGGGCTGGAGATATC 59.310 60.000 0.00 0.00 0.00 1.63
5678 6130 1.427809 CTGGTGGGCTGGAGATATCA 58.572 55.000 5.32 0.00 0.00 2.15
5680 6132 1.131638 GGTGGGCTGGAGATATCACA 58.868 55.000 5.32 2.81 0.00 3.58
5681 6133 1.071385 GGTGGGCTGGAGATATCACAG 59.929 57.143 18.11 18.11 35.40 3.66
5683 6135 2.042464 TGGGCTGGAGATATCACAGTC 58.958 52.381 21.32 19.94 36.17 3.51
5684 6136 2.829741 GGCTGGAGATATCACAGTCC 57.170 55.000 21.32 18.91 34.79 3.85
5685 6137 1.346068 GGCTGGAGATATCACAGTCCC 59.654 57.143 21.32 14.45 34.79 4.46
5686 6138 2.324541 GCTGGAGATATCACAGTCCCT 58.675 52.381 21.32 0.00 34.79 4.20
5687 6139 2.298729 GCTGGAGATATCACAGTCCCTC 59.701 54.545 21.32 7.40 34.79 4.30
5688 6140 3.843422 CTGGAGATATCACAGTCCCTCT 58.157 50.000 15.51 0.00 0.00 3.69
5689 6141 4.751340 GCTGGAGATATCACAGTCCCTCTA 60.751 50.000 21.32 1.29 34.79 2.43
5690 6142 5.389520 CTGGAGATATCACAGTCCCTCTAA 58.610 45.833 15.51 0.00 0.00 2.10
5693 6145 5.141182 GAGATATCACAGTCCCTCTAACCA 58.859 45.833 5.32 0.00 0.00 3.67
5695 6147 5.777732 AGATATCACAGTCCCTCTAACCATC 59.222 44.000 5.32 0.00 0.00 3.51
5696 6148 2.467880 TCACAGTCCCTCTAACCATCC 58.532 52.381 0.00 0.00 0.00 3.51
5697 6149 2.187958 CACAGTCCCTCTAACCATCCA 58.812 52.381 0.00 0.00 0.00 3.41
5698 6150 2.571653 CACAGTCCCTCTAACCATCCAA 59.428 50.000 0.00 0.00 0.00 3.53
5699 6151 2.572104 ACAGTCCCTCTAACCATCCAAC 59.428 50.000 0.00 0.00 0.00 3.77
5700 6152 2.092914 CAGTCCCTCTAACCATCCAACC 60.093 54.545 0.00 0.00 0.00 3.77
5701 6153 1.913419 GTCCCTCTAACCATCCAACCA 59.087 52.381 0.00 0.00 0.00 3.67
5703 6155 1.633432 CCCTCTAACCATCCAACCACA 59.367 52.381 0.00 0.00 0.00 4.17
5704 6156 2.356125 CCCTCTAACCATCCAACCACAG 60.356 54.545 0.00 0.00 0.00 3.66
5706 6158 2.305927 CTCTAACCATCCAACCACAGGT 59.694 50.000 0.00 0.00 37.65 4.00
5716 6168 2.983592 CCACAGGTTGGTTCGCCC 60.984 66.667 0.00 0.00 41.10 6.13
5736 6191 4.296056 CCCTGGTTGGATAGTTAGTAGGT 58.704 47.826 0.00 0.00 38.35 3.08
5739 6194 5.602978 CCTGGTTGGATAGTTAGTAGGTCAT 59.397 44.000 0.00 0.00 38.35 3.06
5745 6200 9.694137 GTTGGATAGTTAGTAGGTCATTGATAC 57.306 37.037 0.00 0.00 0.00 2.24
5763 6218 5.734720 TGATACCTCAGTCCATCAAAGTTC 58.265 41.667 0.00 0.00 0.00 3.01
5768 6223 4.823989 CCTCAGTCCATCAAAGTTCAAGTT 59.176 41.667 0.00 0.00 0.00 2.66
5774 6229 8.571336 CAGTCCATCAAAGTTCAAGTTCTAAAT 58.429 33.333 0.00 0.00 0.00 1.40
5802 6257 3.375299 ACTGATGGTCGCATTTTTCTAGC 59.625 43.478 0.00 0.00 0.00 3.42
5812 6267 7.196331 GTCGCATTTTTCTAGCTTTATTCCAT 58.804 34.615 0.00 0.00 0.00 3.41
5823 6278 5.741011 AGCTTTATTCCATGACTTTCGGTA 58.259 37.500 0.00 0.00 0.00 4.02
5859 6314 0.926155 CAAGATGATGTGTCGGCTCG 59.074 55.000 0.00 0.00 0.00 5.03
5860 6315 0.807667 AAGATGATGTGTCGGCTCGC 60.808 55.000 0.00 0.00 0.00 5.03
5862 6317 2.635229 GATGATGTGTCGGCTCGCCT 62.635 60.000 6.35 0.00 0.00 5.52
5863 6318 2.583593 GATGTGTCGGCTCGCCTC 60.584 66.667 6.35 0.12 0.00 4.70
5864 6319 3.069980 GATGTGTCGGCTCGCCTCT 62.070 63.158 6.35 0.00 0.00 3.69
5865 6320 2.945398 GATGTGTCGGCTCGCCTCTC 62.945 65.000 6.35 1.59 0.00 3.20
5869 6324 4.877619 TCGGCTCGCCTCTCCGAT 62.878 66.667 6.35 0.00 46.12 4.18
5871 6326 3.532155 GGCTCGCCTCTCCGATGT 61.532 66.667 0.00 0.00 36.54 3.06
5872 6327 2.194212 GGCTCGCCTCTCCGATGTA 61.194 63.158 0.00 0.00 36.54 2.29
5873 6328 1.528292 GGCTCGCCTCTCCGATGTAT 61.528 60.000 0.00 0.00 36.54 2.29
5874 6329 0.315568 GCTCGCCTCTCCGATGTATT 59.684 55.000 0.00 0.00 36.54 1.89
5875 6330 1.667467 GCTCGCCTCTCCGATGTATTC 60.667 57.143 0.00 0.00 36.54 1.75
5877 6332 1.004277 CGCCTCTCCGATGTATTCGC 61.004 60.000 0.00 0.00 46.71 4.70
5878 6333 0.667792 GCCTCTCCGATGTATTCGCC 60.668 60.000 0.00 0.00 46.71 5.54
5879 6334 0.962489 CCTCTCCGATGTATTCGCCT 59.038 55.000 0.00 0.00 46.71 5.52
5880 6335 2.160205 CCTCTCCGATGTATTCGCCTA 58.840 52.381 0.00 0.00 46.71 3.93
5881 6336 2.755655 CCTCTCCGATGTATTCGCCTAT 59.244 50.000 0.00 0.00 46.71 2.57
5883 6338 4.580995 CCTCTCCGATGTATTCGCCTATAT 59.419 45.833 0.00 0.00 46.71 0.86
5884 6339 5.763698 CCTCTCCGATGTATTCGCCTATATA 59.236 44.000 0.00 0.00 46.71 0.86
5885 6340 6.431543 CCTCTCCGATGTATTCGCCTATATAT 59.568 42.308 0.00 0.00 46.71 0.86
5886 6341 7.040340 CCTCTCCGATGTATTCGCCTATATATT 60.040 40.741 0.00 0.00 46.71 1.28
5920 6420 5.137551 TCTAAGGTTAACTTGCCAGCTTTT 58.862 37.500 5.42 0.00 40.37 2.27
5921 6421 4.753516 AAGGTTAACTTGCCAGCTTTTT 57.246 36.364 5.42 0.00 38.21 1.94
5991 6493 2.185387 GCCTGGACTGAAGGTTACCTA 58.815 52.381 3.55 0.00 37.13 3.08
6006 6508 4.553323 GTTACCTACAAAAGAGCTCGTGA 58.447 43.478 18.30 0.00 0.00 4.35
6045 6548 4.466726 AGAAATACCACGCTTCTCTAACCT 59.533 41.667 0.00 0.00 0.00 3.50
6081 6584 4.019681 TCAAGACCCCAATAGATTCACGTT 60.020 41.667 0.00 0.00 0.00 3.99
6082 6585 4.138487 AGACCCCAATAGATTCACGTTC 57.862 45.455 0.00 0.00 0.00 3.95
6086 6589 4.941873 ACCCCAATAGATTCACGTTCTTTC 59.058 41.667 0.00 0.00 0.00 2.62
6098 6601 9.490663 GATTCACGTTCTTTCTTTAACATATGG 57.509 33.333 7.80 0.00 0.00 2.74
6134 6637 6.235664 TGTTGTCTTTTATCCTCCTTACCAC 58.764 40.000 0.00 0.00 0.00 4.16
6143 6646 4.157120 CCTTACCACCCTCGCCGG 62.157 72.222 0.00 0.00 0.00 6.13
6175 6678 0.385029 TGCTCACACAACCACAATGC 59.615 50.000 0.00 0.00 0.00 3.56
6176 6679 0.385029 GCTCACACAACCACAATGCA 59.615 50.000 0.00 0.00 0.00 3.96
6184 6687 5.007823 CACACAACCACAATGCATTTGAATT 59.992 36.000 9.83 7.09 38.76 2.17
6204 6707 4.759516 TTTTGTCAATCTTAAGGCGTCC 57.240 40.909 1.85 0.00 0.00 4.79
6216 6719 3.532155 GCGTCCCTCTCTCGGCAT 61.532 66.667 0.00 0.00 0.00 4.40
6231 6734 5.536260 TCTCGGCATTAGATGAGAAATCTG 58.464 41.667 0.00 0.00 34.72 2.90
6249 6752 3.214328 TCTGTTCTTTTTCCTGTGAGGC 58.786 45.455 0.00 0.00 34.61 4.70
6258 6761 2.037136 CCTGTGAGGCTTTGGCGAG 61.037 63.158 0.00 0.00 39.81 5.03
6259 6762 1.004560 CTGTGAGGCTTTGGCGAGA 60.005 57.895 0.00 0.00 39.81 4.04
6260 6763 0.392193 CTGTGAGGCTTTGGCGAGAT 60.392 55.000 0.00 0.00 39.81 2.75
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
47 48 4.321966 GGCGATCCCTAGGCTGCC 62.322 72.222 11.65 11.65 35.04 4.85
49 50 1.004080 CATGGCGATCCCTAGGCTG 60.004 63.158 2.05 0.00 0.00 4.85
122 132 1.449601 GCCCACATGTACCACTCCG 60.450 63.158 0.00 0.00 0.00 4.63
139 149 0.607489 AACCAGGAGCAGTGACATGC 60.607 55.000 0.00 0.00 46.88 4.06
319 331 2.099405 CACACTCTCTCTCTTCCCTCC 58.901 57.143 0.00 0.00 0.00 4.30
323 335 2.625790 ACACACACACTCTCTCTCTTCC 59.374 50.000 0.00 0.00 0.00 3.46
334 352 1.270839 GCTCATACCCACACACACACT 60.271 52.381 0.00 0.00 0.00 3.55
343 361 1.221414 GAAGATGCGCTCATACCCAC 58.779 55.000 9.73 0.00 31.96 4.61
346 651 2.279741 TGTTGAAGATGCGCTCATACC 58.720 47.619 9.73 0.00 31.96 2.73
354 659 3.242518 TCTTACGACTGTTGAAGATGCG 58.757 45.455 1.15 0.00 0.00 4.73
357 662 6.153000 ACACCTATCTTACGACTGTTGAAGAT 59.847 38.462 18.32 18.32 40.73 2.40
358 663 5.475909 ACACCTATCTTACGACTGTTGAAGA 59.524 40.000 1.15 7.12 32.73 2.87
359 664 5.710984 ACACCTATCTTACGACTGTTGAAG 58.289 41.667 1.15 2.08 0.00 3.02
360 665 5.717078 ACACCTATCTTACGACTGTTGAA 57.283 39.130 1.15 0.00 0.00 2.69
361 666 5.717078 AACACCTATCTTACGACTGTTGA 57.283 39.130 1.15 0.00 0.00 3.18
362 667 5.924254 TCAAACACCTATCTTACGACTGTTG 59.076 40.000 0.00 0.00 0.00 3.33
363 668 6.092955 TCAAACACCTATCTTACGACTGTT 57.907 37.500 0.00 0.00 0.00 3.16
364 669 5.717078 TCAAACACCTATCTTACGACTGT 57.283 39.130 0.00 0.00 0.00 3.55
365 670 8.873215 ATTATCAAACACCTATCTTACGACTG 57.127 34.615 0.00 0.00 0.00 3.51
366 671 9.886132 AAATTATCAAACACCTATCTTACGACT 57.114 29.630 0.00 0.00 0.00 4.18
367 672 9.916397 CAAATTATCAAACACCTATCTTACGAC 57.084 33.333 0.00 0.00 0.00 4.34
368 673 9.661563 ACAAATTATCAAACACCTATCTTACGA 57.338 29.630 0.00 0.00 0.00 3.43
369 674 9.916397 GACAAATTATCAAACACCTATCTTACG 57.084 33.333 0.00 0.00 0.00 3.18
373 678 9.911788 AGATGACAAATTATCAAACACCTATCT 57.088 29.630 0.00 0.00 0.00 1.98
377 682 9.739276 TTCTAGATGACAAATTATCAAACACCT 57.261 29.630 0.00 0.00 0.00 4.00
378 683 9.774742 GTTCTAGATGACAAATTATCAAACACC 57.225 33.333 0.00 0.00 0.00 4.16
390 695 9.538508 CATCATCACTATGTTCTAGATGACAAA 57.461 33.333 5.65 0.00 45.29 2.83
391 696 8.699130 ACATCATCACTATGTTCTAGATGACAA 58.301 33.333 5.65 0.00 45.29 3.18
392 697 8.139989 CACATCATCACTATGTTCTAGATGACA 58.860 37.037 5.65 0.00 45.29 3.58
393 698 8.355913 TCACATCATCACTATGTTCTAGATGAC 58.644 37.037 5.65 0.00 45.29 3.06
394 699 8.355913 GTCACATCATCACTATGTTCTAGATGA 58.644 37.037 0.00 0.00 46.16 2.92
395 700 8.139989 TGTCACATCATCACTATGTTCTAGATG 58.860 37.037 0.00 0.00 35.39 2.90
396 701 8.242729 TGTCACATCATCACTATGTTCTAGAT 57.757 34.615 0.00 0.00 35.39 1.98
397 702 7.645058 TGTCACATCATCACTATGTTCTAGA 57.355 36.000 0.00 0.00 35.39 2.43
431 736 9.628500 TCTACATACAACTTTGCTCTCTCTATA 57.372 33.333 0.00 0.00 0.00 1.31
432 737 8.526667 TCTACATACAACTTTGCTCTCTCTAT 57.473 34.615 0.00 0.00 0.00 1.98
433 738 7.939784 TCTACATACAACTTTGCTCTCTCTA 57.060 36.000 0.00 0.00 0.00 2.43
434 739 6.842437 TCTACATACAACTTTGCTCTCTCT 57.158 37.500 0.00 0.00 0.00 3.10
435 740 9.587772 TTAATCTACATACAACTTTGCTCTCTC 57.412 33.333 0.00 0.00 0.00 3.20
438 743 9.890629 TGATTAATCTACATACAACTTTGCTCT 57.109 29.630 16.24 0.00 0.00 4.09
452 757 9.237187 TGTGCAAAGGTTATTGATTAATCTACA 57.763 29.630 16.24 0.00 29.58 2.74
455 760 7.761249 GCTTGTGCAAAGGTTATTGATTAATCT 59.239 33.333 16.24 0.00 39.41 2.40
456 761 7.761249 AGCTTGTGCAAAGGTTATTGATTAATC 59.239 33.333 8.60 8.60 42.74 1.75
457 762 7.614494 AGCTTGTGCAAAGGTTATTGATTAAT 58.386 30.769 7.29 0.00 42.74 1.40
458 763 6.991938 AGCTTGTGCAAAGGTTATTGATTAA 58.008 32.000 7.29 0.00 42.74 1.40
459 764 6.350110 GGAGCTTGTGCAAAGGTTATTGATTA 60.350 38.462 12.42 0.00 42.74 1.75
460 765 5.473039 GAGCTTGTGCAAAGGTTATTGATT 58.527 37.500 12.42 0.00 42.74 2.57
461 766 4.082026 GGAGCTTGTGCAAAGGTTATTGAT 60.082 41.667 12.42 0.00 42.74 2.57
462 767 3.255642 GGAGCTTGTGCAAAGGTTATTGA 59.744 43.478 12.42 0.00 42.74 2.57
463 768 3.005684 TGGAGCTTGTGCAAAGGTTATTG 59.994 43.478 12.42 0.00 42.74 1.90
464 769 3.230134 TGGAGCTTGTGCAAAGGTTATT 58.770 40.909 12.42 0.00 42.74 1.40
465 770 2.875296 TGGAGCTTGTGCAAAGGTTAT 58.125 42.857 12.42 0.00 42.74 1.89
466 771 2.356665 TGGAGCTTGTGCAAAGGTTA 57.643 45.000 12.42 5.34 42.74 2.85
467 772 1.410153 CTTGGAGCTTGTGCAAAGGTT 59.590 47.619 12.42 0.00 42.74 3.50
468 773 1.035139 CTTGGAGCTTGTGCAAAGGT 58.965 50.000 11.42 11.42 42.74 3.50
469 774 0.316204 CCTTGGAGCTTGTGCAAAGG 59.684 55.000 9.63 3.57 42.74 3.11
470 775 1.035139 ACCTTGGAGCTTGTGCAAAG 58.965 50.000 0.00 0.00 42.74 2.77
471 776 0.746063 CACCTTGGAGCTTGTGCAAA 59.254 50.000 0.00 0.00 42.74 3.68
472 777 0.106769 TCACCTTGGAGCTTGTGCAA 60.107 50.000 0.00 0.00 42.74 4.08
473 778 0.106769 TTCACCTTGGAGCTTGTGCA 60.107 50.000 0.00 0.00 42.74 4.57
474 779 1.032014 TTTCACCTTGGAGCTTGTGC 58.968 50.000 0.00 0.00 40.05 4.57
475 780 3.318839 TCAATTTCACCTTGGAGCTTGTG 59.681 43.478 0.00 0.00 0.00 3.33
476 781 3.565307 TCAATTTCACCTTGGAGCTTGT 58.435 40.909 0.00 0.00 0.00 3.16
477 782 4.589216 TTCAATTTCACCTTGGAGCTTG 57.411 40.909 0.00 0.00 0.00 4.01
478 783 5.105595 GCTATTCAATTTCACCTTGGAGCTT 60.106 40.000 0.00 0.00 0.00 3.74
479 784 4.400567 GCTATTCAATTTCACCTTGGAGCT 59.599 41.667 0.00 0.00 0.00 4.09
480 785 4.400567 AGCTATTCAATTTCACCTTGGAGC 59.599 41.667 0.00 0.00 0.00 4.70
481 786 6.521151 AAGCTATTCAATTTCACCTTGGAG 57.479 37.500 0.00 0.00 0.00 3.86
482 787 6.945435 TGTAAGCTATTCAATTTCACCTTGGA 59.055 34.615 0.00 0.00 0.00 3.53
483 788 7.156876 TGTAAGCTATTCAATTTCACCTTGG 57.843 36.000 0.00 0.00 0.00 3.61
484 789 9.722056 GTATGTAAGCTATTCAATTTCACCTTG 57.278 33.333 0.00 0.00 0.00 3.61
485 790 9.461312 TGTATGTAAGCTATTCAATTTCACCTT 57.539 29.630 0.00 0.00 0.00 3.50
486 791 9.461312 TTGTATGTAAGCTATTCAATTTCACCT 57.539 29.630 0.00 0.00 0.00 4.00
516 821 9.672673 AACAAGCTATCATACAACTACTTCAAT 57.327 29.630 0.00 0.00 0.00 2.57
517 822 8.935844 CAACAAGCTATCATACAACTACTTCAA 58.064 33.333 0.00 0.00 0.00 2.69
518 823 7.549134 CCAACAAGCTATCATACAACTACTTCA 59.451 37.037 0.00 0.00 0.00 3.02
519 824 7.549488 ACCAACAAGCTATCATACAACTACTTC 59.451 37.037 0.00 0.00 0.00 3.01
520 825 7.394816 ACCAACAAGCTATCATACAACTACTT 58.605 34.615 0.00 0.00 0.00 2.24
521 826 6.947464 ACCAACAAGCTATCATACAACTACT 58.053 36.000 0.00 0.00 0.00 2.57
522 827 7.333423 TCAACCAACAAGCTATCATACAACTAC 59.667 37.037 0.00 0.00 0.00 2.73
523 828 7.390823 TCAACCAACAAGCTATCATACAACTA 58.609 34.615 0.00 0.00 0.00 2.24
524 829 6.237901 TCAACCAACAAGCTATCATACAACT 58.762 36.000 0.00 0.00 0.00 3.16
525 830 6.494893 TCAACCAACAAGCTATCATACAAC 57.505 37.500 0.00 0.00 0.00 3.32
526 831 6.883756 TCATCAACCAACAAGCTATCATACAA 59.116 34.615 0.00 0.00 0.00 2.41
527 832 6.316140 GTCATCAACCAACAAGCTATCATACA 59.684 38.462 0.00 0.00 0.00 2.29
528 833 6.316140 TGTCATCAACCAACAAGCTATCATAC 59.684 38.462 0.00 0.00 0.00 2.39
529 834 6.413892 TGTCATCAACCAACAAGCTATCATA 58.586 36.000 0.00 0.00 0.00 2.15
530 835 5.255687 TGTCATCAACCAACAAGCTATCAT 58.744 37.500 0.00 0.00 0.00 2.45
531 836 4.650734 TGTCATCAACCAACAAGCTATCA 58.349 39.130 0.00 0.00 0.00 2.15
532 837 5.355071 TCATGTCATCAACCAACAAGCTATC 59.645 40.000 0.00 0.00 0.00 2.08
533 838 5.255687 TCATGTCATCAACCAACAAGCTAT 58.744 37.500 0.00 0.00 0.00 2.97
534 839 4.650734 TCATGTCATCAACCAACAAGCTA 58.349 39.130 0.00 0.00 0.00 3.32
535 840 3.489355 TCATGTCATCAACCAACAAGCT 58.511 40.909 0.00 0.00 0.00 3.74
536 841 3.921119 TCATGTCATCAACCAACAAGC 57.079 42.857 0.00 0.00 0.00 4.01
537 842 8.991243 AAATATTCATGTCATCAACCAACAAG 57.009 30.769 0.00 0.00 0.00 3.16
539 844 9.853555 GTAAAATATTCATGTCATCAACCAACA 57.146 29.630 0.00 0.00 0.00 3.33
540 845 9.301153 GGTAAAATATTCATGTCATCAACCAAC 57.699 33.333 0.00 0.00 0.00 3.77
541 846 9.029368 TGGTAAAATATTCATGTCATCAACCAA 57.971 29.630 0.00 0.00 0.00 3.67
542 847 8.586879 TGGTAAAATATTCATGTCATCAACCA 57.413 30.769 0.00 0.00 0.00 3.67
543 848 9.301153 GTTGGTAAAATATTCATGTCATCAACC 57.699 33.333 0.00 0.00 0.00 3.77
544 849 9.853555 TGTTGGTAAAATATTCATGTCATCAAC 57.146 29.630 0.00 0.00 0.00 3.18
547 852 9.023967 GCTTGTTGGTAAAATATTCATGTCATC 57.976 33.333 0.00 0.00 0.00 2.92
548 853 7.981225 GGCTTGTTGGTAAAATATTCATGTCAT 59.019 33.333 0.00 0.00 0.00 3.06
549 854 7.178274 AGGCTTGTTGGTAAAATATTCATGTCA 59.822 33.333 0.00 0.00 0.00 3.58
550 855 7.547227 AGGCTTGTTGGTAAAATATTCATGTC 58.453 34.615 0.00 0.00 0.00 3.06
551 856 7.480760 AGGCTTGTTGGTAAAATATTCATGT 57.519 32.000 0.00 0.00 0.00 3.21
552 857 9.301153 GTTAGGCTTGTTGGTAAAATATTCATG 57.699 33.333 0.00 0.00 0.00 3.07
553 858 9.030452 TGTTAGGCTTGTTGGTAAAATATTCAT 57.970 29.630 0.00 0.00 0.00 2.57
554 859 8.410673 TGTTAGGCTTGTTGGTAAAATATTCA 57.589 30.769 0.00 0.00 0.00 2.57
557 862 9.469097 TGTATGTTAGGCTTGTTGGTAAAATAT 57.531 29.630 0.00 0.00 0.00 1.28
558 863 8.865420 TGTATGTTAGGCTTGTTGGTAAAATA 57.135 30.769 0.00 0.00 0.00 1.40
559 864 7.768807 TGTATGTTAGGCTTGTTGGTAAAAT 57.231 32.000 0.00 0.00 0.00 1.82
560 865 7.427214 GTTGTATGTTAGGCTTGTTGGTAAAA 58.573 34.615 0.00 0.00 0.00 1.52
561 866 6.016108 GGTTGTATGTTAGGCTTGTTGGTAAA 60.016 38.462 0.00 0.00 0.00 2.01
562 867 5.474189 GGTTGTATGTTAGGCTTGTTGGTAA 59.526 40.000 0.00 0.00 0.00 2.85
563 868 5.005094 GGTTGTATGTTAGGCTTGTTGGTA 58.995 41.667 0.00 0.00 0.00 3.25
564 869 3.824443 GGTTGTATGTTAGGCTTGTTGGT 59.176 43.478 0.00 0.00 0.00 3.67
565 870 4.079253 AGGTTGTATGTTAGGCTTGTTGG 58.921 43.478 0.00 0.00 0.00 3.77
566 871 4.518970 ACAGGTTGTATGTTAGGCTTGTTG 59.481 41.667 0.00 0.00 0.00 3.33
567 872 4.725490 ACAGGTTGTATGTTAGGCTTGTT 58.275 39.130 0.00 0.00 0.00 2.83
568 873 4.367039 ACAGGTTGTATGTTAGGCTTGT 57.633 40.909 0.00 0.00 0.00 3.16
569 874 6.811253 TTAACAGGTTGTATGTTAGGCTTG 57.189 37.500 0.00 0.00 42.40 4.01
570 875 7.228590 TCTTTAACAGGTTGTATGTTAGGCTT 58.771 34.615 0.00 0.00 42.40 4.35
571 876 6.775708 TCTTTAACAGGTTGTATGTTAGGCT 58.224 36.000 0.00 0.00 42.40 4.58
572 877 7.472543 CATCTTTAACAGGTTGTATGTTAGGC 58.527 38.462 0.00 0.00 42.40 3.93
573 878 7.415206 GGCATCTTTAACAGGTTGTATGTTAGG 60.415 40.741 0.00 0.00 42.40 2.69
574 879 7.415206 GGGCATCTTTAACAGGTTGTATGTTAG 60.415 40.741 0.00 0.00 42.40 2.34
575 880 6.376018 GGGCATCTTTAACAGGTTGTATGTTA 59.624 38.462 0.00 0.00 41.08 2.41
576 881 5.185056 GGGCATCTTTAACAGGTTGTATGTT 59.815 40.000 0.00 0.00 43.15 2.71
577 882 4.705023 GGGCATCTTTAACAGGTTGTATGT 59.295 41.667 0.00 0.00 0.00 2.29
578 883 4.949856 AGGGCATCTTTAACAGGTTGTATG 59.050 41.667 0.00 0.00 0.00 2.39
579 884 4.949856 CAGGGCATCTTTAACAGGTTGTAT 59.050 41.667 0.00 0.00 0.00 2.29
580 885 4.042311 TCAGGGCATCTTTAACAGGTTGTA 59.958 41.667 0.00 0.00 0.00 2.41
581 886 3.157087 CAGGGCATCTTTAACAGGTTGT 58.843 45.455 0.00 0.00 0.00 3.32
582 887 3.420893 TCAGGGCATCTTTAACAGGTTG 58.579 45.455 0.00 0.00 0.00 3.77
583 888 3.330701 TCTCAGGGCATCTTTAACAGGTT 59.669 43.478 0.00 0.00 0.00 3.50
584 889 2.912956 TCTCAGGGCATCTTTAACAGGT 59.087 45.455 0.00 0.00 0.00 4.00
585 890 3.634397 TCTCAGGGCATCTTTAACAGG 57.366 47.619 0.00 0.00 0.00 4.00
586 891 5.188434 TCATTCTCAGGGCATCTTTAACAG 58.812 41.667 0.00 0.00 0.00 3.16
587 892 5.045651 TCTCATTCTCAGGGCATCTTTAACA 60.046 40.000 0.00 0.00 0.00 2.41
588 893 5.431765 TCTCATTCTCAGGGCATCTTTAAC 58.568 41.667 0.00 0.00 0.00 2.01
589 894 5.678583 CTCTCATTCTCAGGGCATCTTTAA 58.321 41.667 0.00 0.00 0.00 1.52
590 895 4.444022 GCTCTCATTCTCAGGGCATCTTTA 60.444 45.833 0.00 0.00 37.32 1.85
591 896 3.684981 GCTCTCATTCTCAGGGCATCTTT 60.685 47.826 0.00 0.00 37.32 2.52
592 897 2.158784 GCTCTCATTCTCAGGGCATCTT 60.159 50.000 0.00 0.00 37.32 2.40
593 898 1.417145 GCTCTCATTCTCAGGGCATCT 59.583 52.381 0.00 0.00 37.32 2.90
594 899 1.873069 CGCTCTCATTCTCAGGGCATC 60.873 57.143 0.00 0.00 37.18 3.91
595 900 0.106335 CGCTCTCATTCTCAGGGCAT 59.894 55.000 0.00 0.00 37.18 4.40
596 901 1.519246 CGCTCTCATTCTCAGGGCA 59.481 57.895 0.00 0.00 37.18 5.36
597 902 1.227497 CCGCTCTCATTCTCAGGGC 60.227 63.158 0.00 0.00 33.58 5.19
598 903 0.388659 CTCCGCTCTCATTCTCAGGG 59.611 60.000 0.00 0.00 0.00 4.45
599 904 0.249405 GCTCCGCTCTCATTCTCAGG 60.249 60.000 0.00 0.00 0.00 3.86
600 905 0.249405 GGCTCCGCTCTCATTCTCAG 60.249 60.000 0.00 0.00 0.00 3.35
601 906 0.685785 AGGCTCCGCTCTCATTCTCA 60.686 55.000 0.00 0.00 0.00 3.27
602 907 0.249405 CAGGCTCCGCTCTCATTCTC 60.249 60.000 0.00 0.00 0.00 2.87
603 908 0.685785 TCAGGCTCCGCTCTCATTCT 60.686 55.000 0.00 0.00 0.00 2.40
604 909 0.529555 GTCAGGCTCCGCTCTCATTC 60.530 60.000 0.00 0.00 0.00 2.67
605 910 1.519719 GTCAGGCTCCGCTCTCATT 59.480 57.895 0.00 0.00 0.00 2.57
606 911 2.780094 CGTCAGGCTCCGCTCTCAT 61.780 63.158 0.00 0.00 0.00 2.90
607 912 3.443925 CGTCAGGCTCCGCTCTCA 61.444 66.667 0.00 0.00 0.00 3.27
608 913 4.200283 CCGTCAGGCTCCGCTCTC 62.200 72.222 0.00 0.00 0.00 3.20
788 1126 1.995484 CGTGATCACTGTGGTAGCTTG 59.005 52.381 22.95 0.00 0.00 4.01
789 1127 1.673033 GCGTGATCACTGTGGTAGCTT 60.673 52.381 22.95 0.00 0.00 3.74
790 1128 0.108615 GCGTGATCACTGTGGTAGCT 60.109 55.000 22.95 0.00 0.00 3.32
791 1129 1.084370 GGCGTGATCACTGTGGTAGC 61.084 60.000 22.95 16.05 0.00 3.58
792 1130 0.532573 AGGCGTGATCACTGTGGTAG 59.467 55.000 22.95 7.23 0.00 3.18
793 1131 1.475280 GTAGGCGTGATCACTGTGGTA 59.525 52.381 22.95 5.42 0.00 3.25
794 1132 0.246635 GTAGGCGTGATCACTGTGGT 59.753 55.000 22.95 0.00 0.00 4.16
795 1133 0.246360 TGTAGGCGTGATCACTGTGG 59.754 55.000 22.95 9.02 0.00 4.17
796 1134 1.067565 ACTGTAGGCGTGATCACTGTG 60.068 52.381 22.95 9.37 0.00 3.66
982 1329 1.037579 ATCACTCGATCGGCTGTCCA 61.038 55.000 16.41 2.05 0.00 4.02
1332 1679 3.127352 GACGAGCGAGGAGGCGAAT 62.127 63.158 0.00 0.00 38.18 3.34
2132 2482 3.687102 CCACGGGGCTGTACGACA 61.687 66.667 0.00 0.00 0.00 4.35
2419 2769 0.717784 CAGCTGTCGTGCATGTAGTG 59.282 55.000 5.25 4.17 34.99 2.74
2420 2770 1.016130 GCAGCTGTCGTGCATGTAGT 61.016 55.000 16.64 0.00 40.86 2.73
2421 2771 1.015607 TGCAGCTGTCGTGCATGTAG 61.016 55.000 16.64 7.15 45.96 2.74
2422 2772 1.005156 TGCAGCTGTCGTGCATGTA 60.005 52.632 16.64 0.00 45.96 2.29
2423 2773 2.281002 TGCAGCTGTCGTGCATGT 60.281 55.556 16.64 0.00 45.96 3.21
2427 2777 3.114616 ATCGTGCAGCTGTCGTGC 61.115 61.111 24.17 10.01 41.59 5.34
2428 2778 1.949015 GACATCGTGCAGCTGTCGTG 61.949 60.000 24.17 22.26 36.44 4.35
2429 2779 1.734477 GACATCGTGCAGCTGTCGT 60.734 57.895 24.17 14.00 36.44 4.34
2430 2780 1.284297 TTGACATCGTGCAGCTGTCG 61.284 55.000 16.64 19.39 46.01 4.35
2431 2781 1.061711 GATTGACATCGTGCAGCTGTC 59.938 52.381 16.64 13.62 44.02 3.51
2432 2782 1.081892 GATTGACATCGTGCAGCTGT 58.918 50.000 16.64 0.00 30.94 4.40
2433 2783 1.366679 AGATTGACATCGTGCAGCTG 58.633 50.000 10.11 10.11 34.17 4.24
2434 2784 2.819115 CTAGATTGACATCGTGCAGCT 58.181 47.619 0.00 0.00 34.17 4.24
2435 2785 1.260033 GCTAGATTGACATCGTGCAGC 59.740 52.381 0.00 0.00 34.61 5.25
2436 2786 1.863454 GGCTAGATTGACATCGTGCAG 59.137 52.381 0.00 0.00 35.52 4.41
2437 2787 1.206849 TGGCTAGATTGACATCGTGCA 59.793 47.619 0.00 0.00 35.52 4.57
2438 2788 1.939974 TGGCTAGATTGACATCGTGC 58.060 50.000 0.00 0.00 34.17 5.34
2443 2793 3.881688 GCAACAGATGGCTAGATTGACAT 59.118 43.478 0.00 0.00 38.59 3.06
2444 2794 3.273434 GCAACAGATGGCTAGATTGACA 58.727 45.455 0.00 0.00 0.00 3.58
2445 2795 3.064545 GTGCAACAGATGGCTAGATTGAC 59.935 47.826 0.00 0.00 36.32 3.18
2446 2796 3.054875 AGTGCAACAGATGGCTAGATTGA 60.055 43.478 0.00 0.00 41.43 2.57
2447 2797 3.276857 AGTGCAACAGATGGCTAGATTG 58.723 45.455 0.00 0.00 41.43 2.67
2448 2798 3.641434 AGTGCAACAGATGGCTAGATT 57.359 42.857 0.00 0.00 41.43 2.40
2449 2799 3.641434 AAGTGCAACAGATGGCTAGAT 57.359 42.857 0.00 0.00 41.43 1.98
2450 2800 3.769300 TCTAAGTGCAACAGATGGCTAGA 59.231 43.478 0.00 0.00 41.43 2.43
2451 2801 4.128925 TCTAAGTGCAACAGATGGCTAG 57.871 45.455 0.00 0.00 41.43 3.42
2452 2802 4.760530 ATCTAAGTGCAACAGATGGCTA 57.239 40.909 5.42 0.00 41.43 3.93
2453 2803 3.641434 ATCTAAGTGCAACAGATGGCT 57.359 42.857 5.42 0.00 41.43 4.75
2454 2804 7.524912 CATATTATCTAAGTGCAACAGATGGC 58.475 38.462 13.52 0.00 41.43 4.40
2455 2805 7.173735 TGCATATTATCTAAGTGCAACAGATGG 59.826 37.037 13.52 3.21 41.43 3.51
2456 2806 8.013947 GTGCATATTATCTAAGTGCAACAGATG 58.986 37.037 13.52 2.85 40.20 2.90
2457 2807 7.095481 CGTGCATATTATCTAAGTGCAACAGAT 60.095 37.037 11.85 9.98 40.20 2.90
2458 2808 6.200854 CGTGCATATTATCTAAGTGCAACAGA 59.799 38.462 11.85 0.00 40.20 3.41
2459 2809 6.357980 CGTGCATATTATCTAAGTGCAACAG 58.642 40.000 11.85 0.00 40.20 3.16
2460 2810 5.236263 CCGTGCATATTATCTAAGTGCAACA 59.764 40.000 11.85 0.00 40.20 3.33
2461 2811 5.465390 TCCGTGCATATTATCTAAGTGCAAC 59.535 40.000 11.85 7.72 40.20 4.17
2462 2812 5.465390 GTCCGTGCATATTATCTAAGTGCAA 59.535 40.000 11.85 0.00 40.20 4.08
2463 2813 4.988540 GTCCGTGCATATTATCTAAGTGCA 59.011 41.667 0.00 8.06 37.96 4.57
2464 2814 4.090066 CGTCCGTGCATATTATCTAAGTGC 59.910 45.833 0.00 0.00 33.80 4.40
2465 2815 4.090066 GCGTCCGTGCATATTATCTAAGTG 59.910 45.833 0.00 0.00 34.15 3.16
2466 2816 4.235360 GCGTCCGTGCATATTATCTAAGT 58.765 43.478 0.00 0.00 34.15 2.24
2467 2817 4.234574 TGCGTCCGTGCATATTATCTAAG 58.765 43.478 0.00 0.00 40.62 2.18
2468 2818 4.245845 TGCGTCCGTGCATATTATCTAA 57.754 40.909 0.00 0.00 40.62 2.10
2469 2819 3.926821 TGCGTCCGTGCATATTATCTA 57.073 42.857 0.00 0.00 40.62 1.98
2470 2820 2.812358 TGCGTCCGTGCATATTATCT 57.188 45.000 0.00 0.00 40.62 1.98
2478 2828 2.738139 CATCAGTGCGTCCGTGCA 60.738 61.111 0.00 0.00 43.95 4.57
2479 2829 2.738521 ACATCAGTGCGTCCGTGC 60.739 61.111 0.00 0.00 0.00 5.34
2480 2830 3.159070 CACATCAGTGCGTCCGTG 58.841 61.111 0.00 0.00 39.21 4.94
2489 2839 1.066929 TGCACGATACAGCACATCAGT 60.067 47.619 0.00 0.00 35.51 3.41
2490 2840 1.643880 TGCACGATACAGCACATCAG 58.356 50.000 0.00 0.00 35.51 2.90
2491 2841 3.830679 TGCACGATACAGCACATCA 57.169 47.368 0.00 0.00 35.51 3.07
2496 2846 1.393196 CGATTTGTGCACGATACAGCA 59.607 47.619 13.13 0.00 38.65 4.41
2497 2847 1.393539 ACGATTTGTGCACGATACAGC 59.606 47.619 13.13 0.00 0.00 4.40
2498 2848 2.923655 AGACGATTTGTGCACGATACAG 59.076 45.455 13.13 4.49 0.00 2.74
2499 2849 2.666022 CAGACGATTTGTGCACGATACA 59.334 45.455 13.13 0.00 0.00 2.29
2500 2850 2.534939 GCAGACGATTTGTGCACGATAC 60.535 50.000 13.13 6.65 37.16 2.24
2501 2851 1.658596 GCAGACGATTTGTGCACGATA 59.341 47.619 13.13 0.00 37.16 2.92
2502 2852 0.443869 GCAGACGATTTGTGCACGAT 59.556 50.000 13.13 8.85 37.16 3.73
2503 2853 0.599991 AGCAGACGATTTGTGCACGA 60.600 50.000 13.13 7.71 39.80 4.35
2504 2854 1.067693 TAGCAGACGATTTGTGCACG 58.932 50.000 13.13 1.70 39.80 5.34
2505 2855 2.789092 GCATAGCAGACGATTTGTGCAC 60.789 50.000 10.75 10.75 39.80 4.57
2506 2856 1.398041 GCATAGCAGACGATTTGTGCA 59.602 47.619 0.00 0.00 39.80 4.57
2507 2857 1.593070 CGCATAGCAGACGATTTGTGC 60.593 52.381 0.00 0.00 37.48 4.57
2508 2858 1.660607 ACGCATAGCAGACGATTTGTG 59.339 47.619 0.00 0.00 0.00 3.33
2509 2859 1.927174 GACGCATAGCAGACGATTTGT 59.073 47.619 0.00 0.00 0.00 2.83
2510 2860 1.071894 CGACGCATAGCAGACGATTTG 60.072 52.381 0.00 0.00 0.00 2.32
2511 2861 1.200483 CGACGCATAGCAGACGATTT 58.800 50.000 0.00 0.00 0.00 2.17
2512 2862 0.100682 ACGACGCATAGCAGACGATT 59.899 50.000 0.00 0.00 0.00 3.34
2513 2863 0.592500 CACGACGCATAGCAGACGAT 60.593 55.000 0.00 0.00 0.00 3.73
2514 2864 1.226295 CACGACGCATAGCAGACGA 60.226 57.895 0.00 0.00 0.00 4.20
2515 2865 1.514228 ACACGACGCATAGCAGACG 60.514 57.895 0.00 0.00 0.00 4.18
2516 2866 1.991430 CACACGACGCATAGCAGAC 59.009 57.895 0.00 0.00 0.00 3.51
2517 2867 1.805539 GCACACGACGCATAGCAGA 60.806 57.895 0.00 0.00 0.00 4.26
2518 2868 2.094066 TGCACACGACGCATAGCAG 61.094 57.895 0.00 0.00 33.55 4.24
2519 2869 2.048690 TGCACACGACGCATAGCA 60.049 55.556 0.00 0.00 33.55 3.49
2524 2874 2.048690 TGCTATGCACACGACGCA 60.049 55.556 0.00 0.00 44.94 5.24
2525 2875 2.697425 CTGCTATGCACACGACGC 59.303 61.111 0.00 0.00 33.79 5.19
2526 2876 1.746727 GAGCTGCTATGCACACGACG 61.747 60.000 0.15 0.00 33.79 5.12
2527 2877 0.459237 AGAGCTGCTATGCACACGAC 60.459 55.000 0.15 0.00 33.79 4.34
2528 2878 0.179127 GAGAGCTGCTATGCACACGA 60.179 55.000 0.00 0.00 33.79 4.35
2529 2879 0.459063 TGAGAGCTGCTATGCACACG 60.459 55.000 0.00 0.00 33.79 4.49
2530 2880 1.396301 GTTGAGAGCTGCTATGCACAC 59.604 52.381 0.00 0.00 33.79 3.82
2531 2881 1.676916 GGTTGAGAGCTGCTATGCACA 60.677 52.381 0.00 0.00 33.79 4.57
2532 2882 1.012841 GGTTGAGAGCTGCTATGCAC 58.987 55.000 0.00 0.00 33.79 4.57
2533 2883 0.614812 TGGTTGAGAGCTGCTATGCA 59.385 50.000 0.00 0.00 36.92 3.96
2534 2884 1.669779 CTTGGTTGAGAGCTGCTATGC 59.330 52.381 0.00 0.00 0.00 3.14
2535 2885 3.257469 TCTTGGTTGAGAGCTGCTATG 57.743 47.619 0.00 0.00 0.00 2.23
2536 2886 3.988976 TTCTTGGTTGAGAGCTGCTAT 57.011 42.857 0.15 0.00 0.00 2.97
2537 2887 3.181455 TGTTTCTTGGTTGAGAGCTGCTA 60.181 43.478 0.15 0.00 0.00 3.49
2538 2888 2.225467 GTTTCTTGGTTGAGAGCTGCT 58.775 47.619 0.00 0.00 0.00 4.24
2539 2889 1.949525 TGTTTCTTGGTTGAGAGCTGC 59.050 47.619 0.00 0.00 0.00 5.25
2540 2890 3.611057 GCATGTTTCTTGGTTGAGAGCTG 60.611 47.826 0.00 0.00 0.00 4.24
2541 2891 2.555757 GCATGTTTCTTGGTTGAGAGCT 59.444 45.455 0.00 0.00 0.00 4.09
2542 2892 2.352127 GGCATGTTTCTTGGTTGAGAGC 60.352 50.000 0.00 0.00 0.00 4.09
2543 2893 3.152341 AGGCATGTTTCTTGGTTGAGAG 58.848 45.455 0.00 0.00 0.00 3.20
2544 2894 3.149196 GAGGCATGTTTCTTGGTTGAGA 58.851 45.455 0.00 0.00 0.00 3.27
2545 2895 2.229784 GGAGGCATGTTTCTTGGTTGAG 59.770 50.000 0.00 0.00 0.00 3.02
2546 2896 2.238521 GGAGGCATGTTTCTTGGTTGA 58.761 47.619 0.00 0.00 0.00 3.18
2547 2897 1.273327 GGGAGGCATGTTTCTTGGTTG 59.727 52.381 0.00 0.00 0.00 3.77
2548 2898 1.632589 GGGAGGCATGTTTCTTGGTT 58.367 50.000 0.00 0.00 0.00 3.67
2549 2899 0.251787 GGGGAGGCATGTTTCTTGGT 60.252 55.000 0.00 0.00 0.00 3.67
2550 2900 0.972471 GGGGGAGGCATGTTTCTTGG 60.972 60.000 0.00 0.00 0.00 3.61
2551 2901 0.040204 AGGGGGAGGCATGTTTCTTG 59.960 55.000 0.00 0.00 0.00 3.02
2552 2902 1.285078 GTAGGGGGAGGCATGTTTCTT 59.715 52.381 0.00 0.00 0.00 2.52
2553 2903 0.919710 GTAGGGGGAGGCATGTTTCT 59.080 55.000 0.00 0.00 0.00 2.52
2554 2904 0.623723 TGTAGGGGGAGGCATGTTTC 59.376 55.000 0.00 0.00 0.00 2.78
2555 2905 0.625849 CTGTAGGGGGAGGCATGTTT 59.374 55.000 0.00 0.00 0.00 2.83
2556 2906 0.550147 ACTGTAGGGGGAGGCATGTT 60.550 55.000 0.00 0.00 0.00 2.71
2598 2948 0.688087 GGGAAGGGAGGACACGAGAT 60.688 60.000 0.00 0.00 0.00 2.75
2736 3090 1.522569 GGGCTAGTGGTGCAGGTAG 59.477 63.158 0.00 0.00 0.00 3.18
2737 3091 2.355986 CGGGCTAGTGGTGCAGGTA 61.356 63.158 0.00 0.00 0.00 3.08
2738 3092 3.706373 CGGGCTAGTGGTGCAGGT 61.706 66.667 0.00 0.00 0.00 4.00
2761 3115 8.042515 GTCTAGTAGTATGGAGGGTACAGATAG 58.957 44.444 0.00 0.00 0.00 2.08
2776 3130 9.438163 ACTACTCTACTTGAGGTCTAGTAGTAT 57.562 37.037 20.78 15.03 45.03 2.12
2947 3302 9.971922 CAAAAATAACACTCTTTTTCTCTCCAT 57.028 29.630 0.00 0.00 33.49 3.41
2963 3318 4.699257 GCATTGCATTCCCCAAAAATAACA 59.301 37.500 3.15 0.00 0.00 2.41
3022 3377 0.461548 CCGAGCATGCAGAGAACCTA 59.538 55.000 21.98 0.00 0.00 3.08
3186 3541 7.455008 CCATCCCCATCTACTACTACAAATACT 59.545 40.741 0.00 0.00 0.00 2.12
3187 3542 7.234988 ACCATCCCCATCTACTACTACAAATAC 59.765 40.741 0.00 0.00 0.00 1.89
3189 3544 6.151049 ACCATCCCCATCTACTACTACAAAT 58.849 40.000 0.00 0.00 0.00 2.32
3191 3546 5.152306 ACCATCCCCATCTACTACTACAA 57.848 43.478 0.00 0.00 0.00 2.41
3367 3786 5.494632 AGTTTTTACAGGTACAAGCACAC 57.505 39.130 0.00 0.00 0.00 3.82
3368 3787 5.648526 TGAAGTTTTTACAGGTACAAGCACA 59.351 36.000 0.00 0.00 0.00 4.57
3369 3788 6.126568 TGAAGTTTTTACAGGTACAAGCAC 57.873 37.500 0.00 0.00 0.00 4.40
3370 3789 6.761099 TTGAAGTTTTTACAGGTACAAGCA 57.239 33.333 0.00 0.00 0.00 3.91
3371 3790 9.738832 TTATTTGAAGTTTTTACAGGTACAAGC 57.261 29.630 0.00 0.00 0.00 4.01
3421 3840 2.682856 ACAAAACGATGTCAAGCACACT 59.317 40.909 0.00 0.00 38.04 3.55
3741 4187 6.677431 GCAATGAAATGTTCTGTCTGATCTCC 60.677 42.308 0.00 0.00 0.00 3.71
3749 4195 5.766222 AGAAGTGCAATGAAATGTTCTGTC 58.234 37.500 0.00 0.00 0.00 3.51
3754 4200 7.496591 ACATTTGAAGAAGTGCAATGAAATGTT 59.503 29.630 12.07 0.00 38.84 2.71
3768 4214 7.587629 TGAACTATGAAGCACATTTGAAGAAG 58.412 34.615 2.03 0.00 40.07 2.85
3783 4229 5.576447 TCGCTGTGAGTATGAACTATGAA 57.424 39.130 0.00 0.00 35.56 2.57
3784 4230 5.576447 TTCGCTGTGAGTATGAACTATGA 57.424 39.130 0.00 0.00 35.56 2.15
3785 4231 6.699204 AGATTTCGCTGTGAGTATGAACTATG 59.301 38.462 0.00 0.00 35.56 2.23
3786 4232 6.810911 AGATTTCGCTGTGAGTATGAACTAT 58.189 36.000 0.00 0.00 35.56 2.12
3787 4233 6.208988 AGATTTCGCTGTGAGTATGAACTA 57.791 37.500 0.00 0.00 35.56 2.24
3788 4234 5.078411 AGATTTCGCTGTGAGTATGAACT 57.922 39.130 0.00 0.00 39.21 3.01
3789 4235 6.563010 GCATAGATTTCGCTGTGAGTATGAAC 60.563 42.308 12.35 0.00 0.00 3.18
3790 4236 5.463392 GCATAGATTTCGCTGTGAGTATGAA 59.537 40.000 12.35 0.00 0.00 2.57
3796 4242 2.543012 CTGGCATAGATTTCGCTGTGAG 59.457 50.000 0.00 0.00 0.00 3.51
3804 4250 8.937634 ATTCAAATCAAACTGGCATAGATTTC 57.062 30.769 11.25 0.00 36.94 2.17
3812 4258 4.952071 TCCAATTCAAATCAAACTGGCA 57.048 36.364 0.00 0.00 0.00 4.92
3820 4266 8.277197 AGGAGATAAGACATCCAATTCAAATCA 58.723 33.333 0.00 0.00 35.45 2.57
3823 4269 8.884124 AAAGGAGATAAGACATCCAATTCAAA 57.116 30.769 0.00 0.00 35.45 2.69
3824 4270 8.884124 AAAAGGAGATAAGACATCCAATTCAA 57.116 30.769 0.00 0.00 35.45 2.69
3825 4271 8.884124 AAAAAGGAGATAAGACATCCAATTCA 57.116 30.769 0.00 0.00 35.45 2.57
3867 4313 1.486310 TCGATCAGATGGTTTCCCTGG 59.514 52.381 0.00 0.00 0.00 4.45
3873 4319 5.152623 TCTTGAGTTCGATCAGATGGTTT 57.847 39.130 0.00 0.00 0.00 3.27
3877 4323 4.645762 TCCTCTTGAGTTCGATCAGATG 57.354 45.455 0.00 0.00 0.00 2.90
3946 4392 0.181350 GAAGGGGAGCACGGATCATT 59.819 55.000 0.00 0.00 0.00 2.57
4071 4517 1.649271 GGTGCCCCATCAATCCCTCT 61.649 60.000 0.00 0.00 0.00 3.69
4085 4531 4.666253 TGCTGCTCCTTGGGTGCC 62.666 66.667 0.00 0.00 40.96 5.01
4089 4535 2.750637 CTGCTGCTGCTCCTTGGG 60.751 66.667 17.00 0.00 40.48 4.12
4090 4536 2.750637 CCTGCTGCTGCTCCTTGG 60.751 66.667 17.00 7.30 40.48 3.61
4242 4688 3.017771 ATGCGCCACTCCATCGTGA 62.018 57.895 4.18 0.00 37.06 4.35
4359 4805 1.629043 AGAACAGACAGACGCCCTTA 58.371 50.000 0.00 0.00 0.00 2.69
4450 4896 0.244721 TCCGCGGCTATGATCTGATG 59.755 55.000 23.51 0.00 0.00 3.07
4535 4981 0.040958 GAGCACGAACCTGTTGCAAG 60.041 55.000 0.00 0.00 0.00 4.01
4541 4987 0.388649 GATGACGAGCACGAACCTGT 60.389 55.000 11.40 0.00 42.66 4.00
5047 5499 2.659610 GTCGAGCTGCACCTCCTT 59.340 61.111 1.02 0.00 0.00 3.36
5048 5500 3.753434 CGTCGAGCTGCACCTCCT 61.753 66.667 1.02 0.00 0.00 3.69
5391 5843 5.741982 GTGAAATCGAACAATTAAATCCCCG 59.258 40.000 0.00 0.00 0.00 5.73
5433 5885 3.869832 CACATGAGCGAATCTGAGACAAT 59.130 43.478 0.00 0.00 0.00 2.71
5511 5963 6.858993 CGCTTGCCTTTGTACTGTATTAAAAA 59.141 34.615 0.00 0.00 0.00 1.94
5512 5964 6.375377 CGCTTGCCTTTGTACTGTATTAAAA 58.625 36.000 0.00 0.00 0.00 1.52
5513 5965 5.618195 GCGCTTGCCTTTGTACTGTATTAAA 60.618 40.000 0.00 0.00 0.00 1.52
5515 5967 3.372822 GCGCTTGCCTTTGTACTGTATTA 59.627 43.478 0.00 0.00 0.00 0.98
5516 5968 2.161609 GCGCTTGCCTTTGTACTGTATT 59.838 45.455 0.00 0.00 0.00 1.89
5517 5969 1.737793 GCGCTTGCCTTTGTACTGTAT 59.262 47.619 0.00 0.00 0.00 2.29
5518 5970 1.153353 GCGCTTGCCTTTGTACTGTA 58.847 50.000 0.00 0.00 0.00 2.74
5519 5971 0.535102 AGCGCTTGCCTTTGTACTGT 60.535 50.000 2.64 0.00 40.41 3.55
5520 5972 0.166814 GAGCGCTTGCCTTTGTACTG 59.833 55.000 13.26 0.00 40.41 2.74
5521 5973 0.035458 AGAGCGCTTGCCTTTGTACT 59.965 50.000 13.26 0.00 40.41 2.73
5523 5975 2.465860 TAAGAGCGCTTGCCTTTGTA 57.534 45.000 13.26 0.00 40.41 2.41
5526 5978 2.678336 GTGTATAAGAGCGCTTGCCTTT 59.322 45.455 13.26 4.36 40.41 3.11
5527 5979 2.280628 GTGTATAAGAGCGCTTGCCTT 58.719 47.619 13.26 13.47 40.41 4.35
5529 5981 0.577269 CGTGTATAAGAGCGCTTGCC 59.423 55.000 13.26 0.00 40.41 4.52
5530 5982 1.005975 CACGTGTATAAGAGCGCTTGC 60.006 52.381 13.26 0.00 35.56 4.01
5532 5984 1.278238 GCACGTGTATAAGAGCGCTT 58.722 50.000 13.26 8.09 38.15 4.68
5533 5985 0.172578 TGCACGTGTATAAGAGCGCT 59.827 50.000 11.27 11.27 0.00 5.92
5535 5987 3.179795 GTGTATGCACGTGTATAAGAGCG 59.820 47.826 25.04 0.00 35.75 5.03
5536 5988 4.694012 GTGTATGCACGTGTATAAGAGC 57.306 45.455 25.04 14.55 35.75 4.09
5548 6000 5.235186 GTGTTCATAGGATGAGTGTATGCAC 59.765 44.000 5.71 5.71 45.57 4.57
5549 6001 5.104982 TGTGTTCATAGGATGAGTGTATGCA 60.105 40.000 0.00 0.00 40.94 3.96
5551 6003 6.256539 GTGTGTGTTCATAGGATGAGTGTATG 59.743 42.308 0.00 0.00 40.94 2.39
5552 6004 6.070824 TGTGTGTGTTCATAGGATGAGTGTAT 60.071 38.462 0.00 0.00 40.94 2.29
5553 6005 5.245075 TGTGTGTGTTCATAGGATGAGTGTA 59.755 40.000 0.00 0.00 40.94 2.90
5554 6006 4.040339 TGTGTGTGTTCATAGGATGAGTGT 59.960 41.667 0.00 0.00 40.94 3.55
5555 6007 4.389992 GTGTGTGTGTTCATAGGATGAGTG 59.610 45.833 0.00 0.00 40.94 3.51
5556 6008 4.569943 GTGTGTGTGTTCATAGGATGAGT 58.430 43.478 0.00 0.00 40.94 3.41
5559 6011 2.094258 GCGTGTGTGTGTTCATAGGATG 59.906 50.000 0.00 0.00 0.00 3.51
5561 6013 1.069358 TGCGTGTGTGTGTTCATAGGA 59.931 47.619 0.00 0.00 0.00 2.94
5563 6015 1.864082 TGTGCGTGTGTGTGTTCATAG 59.136 47.619 0.00 0.00 0.00 2.23
5564 6016 1.595328 GTGTGCGTGTGTGTGTTCATA 59.405 47.619 0.00 0.00 0.00 2.15
5565 6017 0.376852 GTGTGCGTGTGTGTGTTCAT 59.623 50.000 0.00 0.00 0.00 2.57
5566 6018 1.640210 GGTGTGCGTGTGTGTGTTCA 61.640 55.000 0.00 0.00 0.00 3.18
5567 6019 1.061887 GGTGTGCGTGTGTGTGTTC 59.938 57.895 0.00 0.00 0.00 3.18
5568 6020 2.403378 GGGTGTGCGTGTGTGTGTT 61.403 57.895 0.00 0.00 0.00 3.32
5569 6021 1.962321 TAGGGTGTGCGTGTGTGTGT 61.962 55.000 0.00 0.00 0.00 3.72
5570 6022 1.227409 TAGGGTGTGCGTGTGTGTG 60.227 57.895 0.00 0.00 0.00 3.82
5571 6023 1.227438 GTAGGGTGTGCGTGTGTGT 60.227 57.895 0.00 0.00 0.00 3.72
5572 6024 1.959226 GGTAGGGTGTGCGTGTGTG 60.959 63.158 0.00 0.00 0.00 3.82
5573 6025 2.424302 GGTAGGGTGTGCGTGTGT 59.576 61.111 0.00 0.00 0.00 3.72
5574 6026 2.358247 GGGTAGGGTGTGCGTGTG 60.358 66.667 0.00 0.00 0.00 3.82
5576 6028 1.335132 ATAGGGGTAGGGTGTGCGTG 61.335 60.000 0.00 0.00 0.00 5.34
5577 6029 1.002533 ATAGGGGTAGGGTGTGCGT 59.997 57.895 0.00 0.00 0.00 5.24
5578 6030 1.046472 TCATAGGGGTAGGGTGTGCG 61.046 60.000 0.00 0.00 0.00 5.34
5581 6033 0.341961 TGCTCATAGGGGTAGGGTGT 59.658 55.000 0.00 0.00 0.00 4.16
5582 6034 0.759346 GTGCTCATAGGGGTAGGGTG 59.241 60.000 0.00 0.00 0.00 4.61
5584 6036 1.625818 GATGTGCTCATAGGGGTAGGG 59.374 57.143 0.32 0.00 34.06 3.53
5585 6037 1.273606 CGATGTGCTCATAGGGGTAGG 59.726 57.143 0.32 0.00 34.06 3.18
5586 6038 1.337260 GCGATGTGCTCATAGGGGTAG 60.337 57.143 10.28 0.00 41.73 3.18
5587 6039 0.679505 GCGATGTGCTCATAGGGGTA 59.320 55.000 10.28 0.00 41.73 3.69
5589 6041 1.302033 GGCGATGTGCTCATAGGGG 60.302 63.158 10.28 0.00 45.43 4.79
5590 6042 1.665916 CGGCGATGTGCTCATAGGG 60.666 63.158 0.00 1.40 45.43 3.53
5591 6043 1.665916 CCGGCGATGTGCTCATAGG 60.666 63.158 9.30 4.82 45.43 2.57
5592 6044 0.249447 TTCCGGCGATGTGCTCATAG 60.249 55.000 9.30 2.79 45.43 2.23
5593 6045 0.176910 TTTCCGGCGATGTGCTCATA 59.823 50.000 9.30 0.00 45.43 2.15
5594 6046 0.464373 ATTTCCGGCGATGTGCTCAT 60.464 50.000 9.30 0.00 45.43 2.90
5596 6048 1.643832 GATTTCCGGCGATGTGCTC 59.356 57.895 9.30 0.00 45.43 4.26
5597 6049 1.819632 GGATTTCCGGCGATGTGCT 60.820 57.895 9.30 0.00 45.43 4.40
5598 6050 1.819632 AGGATTTCCGGCGATGTGC 60.820 57.895 9.30 0.00 42.08 4.57
5600 6052 0.251916 TTCAGGATTTCCGGCGATGT 59.748 50.000 9.30 0.00 42.08 3.06
5601 6053 1.378531 TTTCAGGATTTCCGGCGATG 58.621 50.000 9.30 0.00 42.08 3.84
5604 6056 4.568152 AATTATTTCAGGATTTCCGGCG 57.432 40.909 0.00 0.00 42.08 6.46
5605 6057 5.901552 TGAAATTATTTCAGGATTTCCGGC 58.098 37.500 15.46 0.00 44.21 6.13
5606 6058 7.771183 TCTTGAAATTATTTCAGGATTTCCGG 58.229 34.615 22.73 0.00 46.59 5.14
5618 6070 9.585099 TGCTCGCATTTATTCTTGAAATTATTT 57.415 25.926 0.00 0.00 0.00 1.40
5619 6071 9.023967 GTGCTCGCATTTATTCTTGAAATTATT 57.976 29.630 0.00 0.00 0.00 1.40
5622 6074 5.807011 GGTGCTCGCATTTATTCTTGAAATT 59.193 36.000 0.00 0.00 0.00 1.82
5623 6075 5.105797 TGGTGCTCGCATTTATTCTTGAAAT 60.106 36.000 0.00 0.00 0.00 2.17
5624 6076 4.217334 TGGTGCTCGCATTTATTCTTGAAA 59.783 37.500 0.00 0.00 0.00 2.69
5625 6077 3.755905 TGGTGCTCGCATTTATTCTTGAA 59.244 39.130 0.00 0.00 0.00 2.69
5626 6078 3.342719 TGGTGCTCGCATTTATTCTTGA 58.657 40.909 0.00 0.00 0.00 3.02
5627 6079 3.374988 TCTGGTGCTCGCATTTATTCTTG 59.625 43.478 0.00 0.00 0.00 3.02
5628 6080 3.609853 TCTGGTGCTCGCATTTATTCTT 58.390 40.909 0.00 0.00 0.00 2.52
5629 6081 3.266510 TCTGGTGCTCGCATTTATTCT 57.733 42.857 0.00 0.00 0.00 2.40
5630 6082 3.375299 AGTTCTGGTGCTCGCATTTATTC 59.625 43.478 0.00 0.00 0.00 1.75
5631 6083 3.347216 AGTTCTGGTGCTCGCATTTATT 58.653 40.909 0.00 0.00 0.00 1.40
5632 6084 2.991250 AGTTCTGGTGCTCGCATTTAT 58.009 42.857 0.00 0.00 0.00 1.40
5633 6085 2.472695 AGTTCTGGTGCTCGCATTTA 57.527 45.000 0.00 0.00 0.00 1.40
5634 6086 1.267806 CAAGTTCTGGTGCTCGCATTT 59.732 47.619 0.00 0.00 0.00 2.32
5635 6087 0.877071 CAAGTTCTGGTGCTCGCATT 59.123 50.000 0.00 0.00 0.00 3.56
5636 6088 0.035317 TCAAGTTCTGGTGCTCGCAT 59.965 50.000 0.00 0.00 0.00 4.73
5637 6089 0.179059 TTCAAGTTCTGGTGCTCGCA 60.179 50.000 0.00 0.00 0.00 5.10
5638 6090 0.235926 GTTCAAGTTCTGGTGCTCGC 59.764 55.000 0.00 0.00 0.00 5.03
5639 6091 0.868406 GGTTCAAGTTCTGGTGCTCG 59.132 55.000 0.00 0.00 0.00 5.03
5640 6092 1.202818 AGGGTTCAAGTTCTGGTGCTC 60.203 52.381 0.00 0.00 0.00 4.26
5641 6093 0.846693 AGGGTTCAAGTTCTGGTGCT 59.153 50.000 0.00 0.00 0.00 4.40
5642 6094 0.954452 CAGGGTTCAAGTTCTGGTGC 59.046 55.000 0.00 0.00 0.00 5.01
5643 6095 1.609208 CCAGGGTTCAAGTTCTGGTG 58.391 55.000 0.00 0.00 41.21 4.17
5646 6098 1.609208 CCACCAGGGTTCAAGTTCTG 58.391 55.000 0.00 0.00 0.00 3.02
5658 6110 0.689623 GATATCTCCAGCCCACCAGG 59.310 60.000 0.00 0.00 39.47 4.45
5671 6123 5.144159 TGGTTAGAGGGACTGTGATATCT 57.856 43.478 3.98 0.00 41.55 1.98
5672 6124 5.046950 GGATGGTTAGAGGGACTGTGATATC 60.047 48.000 0.00 0.00 41.55 1.63
5673 6125 4.841246 GGATGGTTAGAGGGACTGTGATAT 59.159 45.833 0.00 0.00 41.55 1.63
5674 6126 4.223953 GGATGGTTAGAGGGACTGTGATA 58.776 47.826 0.00 0.00 41.55 2.15
5675 6127 3.041946 GGATGGTTAGAGGGACTGTGAT 58.958 50.000 0.00 0.00 41.55 3.06
5676 6128 2.225522 TGGATGGTTAGAGGGACTGTGA 60.226 50.000 0.00 0.00 41.55 3.58
5677 6129 2.187958 TGGATGGTTAGAGGGACTGTG 58.812 52.381 0.00 0.00 41.55 3.66
5678 6130 2.572104 GTTGGATGGTTAGAGGGACTGT 59.428 50.000 0.00 0.00 41.55 3.55
5681 6133 1.913419 TGGTTGGATGGTTAGAGGGAC 59.087 52.381 0.00 0.00 0.00 4.46
5683 6135 1.633432 TGTGGTTGGATGGTTAGAGGG 59.367 52.381 0.00 0.00 0.00 4.30
5684 6136 2.356125 CCTGTGGTTGGATGGTTAGAGG 60.356 54.545 0.00 0.00 0.00 3.69
5685 6137 2.305927 ACCTGTGGTTGGATGGTTAGAG 59.694 50.000 0.00 0.00 27.29 2.43
5686 6138 2.344592 ACCTGTGGTTGGATGGTTAGA 58.655 47.619 0.00 0.00 27.29 2.10
5687 6139 2.879103 ACCTGTGGTTGGATGGTTAG 57.121 50.000 0.00 0.00 27.29 2.34
5700 6152 2.113139 AGGGCGAACCAACCTGTG 59.887 61.111 0.00 0.00 43.89 3.66
5701 6153 2.113139 CAGGGCGAACCAACCTGT 59.887 61.111 0.00 0.00 45.21 4.00
5703 6155 2.763645 AACCAGGGCGAACCAACCT 61.764 57.895 0.00 0.00 43.89 3.50
5704 6156 2.203437 AACCAGGGCGAACCAACC 60.203 61.111 0.00 0.00 43.89 3.77
5706 6158 2.075355 ATCCAACCAGGGCGAACCAA 62.075 55.000 0.00 0.00 43.89 3.67
5707 6159 1.202099 TATCCAACCAGGGCGAACCA 61.202 55.000 0.00 0.00 43.89 3.67
5708 6160 0.463833 CTATCCAACCAGGGCGAACC 60.464 60.000 0.00 0.00 38.24 3.62
5711 6163 1.760613 CTAACTATCCAACCAGGGCGA 59.239 52.381 0.00 0.00 38.24 5.54
5712 6164 1.485066 ACTAACTATCCAACCAGGGCG 59.515 52.381 0.00 0.00 38.24 6.13
5713 6165 3.071167 CCTACTAACTATCCAACCAGGGC 59.929 52.174 0.00 0.00 38.24 5.19
5714 6166 4.296056 ACCTACTAACTATCCAACCAGGG 58.704 47.826 0.00 0.00 38.24 4.45
5715 6167 4.960469 TGACCTACTAACTATCCAACCAGG 59.040 45.833 0.00 0.00 39.47 4.45
5716 6168 6.732896 ATGACCTACTAACTATCCAACCAG 57.267 41.667 0.00 0.00 0.00 4.00
5736 6191 5.955961 TTGATGGACTGAGGTATCAATGA 57.044 39.130 0.00 0.00 35.34 2.57
5739 6194 5.762179 ACTTTGATGGACTGAGGTATCAA 57.238 39.130 0.00 0.00 37.66 2.57
5745 6200 4.392940 ACTTGAACTTTGATGGACTGAGG 58.607 43.478 0.00 0.00 0.00 3.86
5763 6218 9.612620 GACCATCAGTGTTAAATTTAGAACTTG 57.387 33.333 10.56 8.53 0.00 3.16
5768 6223 5.935206 TGCGACCATCAGTGTTAAATTTAGA 59.065 36.000 0.00 0.00 0.00 2.10
5774 6229 5.446143 AAAATGCGACCATCAGTGTTAAA 57.554 34.783 0.00 0.00 0.00 1.52
5787 6242 6.551736 TGGAATAAAGCTAGAAAAATGCGAC 58.448 36.000 0.00 0.00 0.00 5.19
5802 6257 7.985476 ACATTACCGAAAGTCATGGAATAAAG 58.015 34.615 0.00 0.00 34.86 1.85
5812 6267 5.845103 TGACAAGTACATTACCGAAAGTCA 58.155 37.500 0.00 0.00 0.00 3.41
5823 6278 8.890718 CATCATCTTGAGATTGACAAGTACATT 58.109 33.333 0.00 0.00 43.30 2.71
5894 6394 4.702131 AGCTGGCAAGTTAACCTTAGAATG 59.298 41.667 0.88 0.00 0.00 2.67
5898 6398 5.453567 AAAAGCTGGCAAGTTAACCTTAG 57.546 39.130 0.88 0.00 0.00 2.18
5920 6420 2.924290 CGTCCTTTTCCAAACGCAAAAA 59.076 40.909 0.00 0.00 0.00 1.94
5921 6421 2.163815 TCGTCCTTTTCCAAACGCAAAA 59.836 40.909 0.00 0.00 35.22 2.44
5932 6434 3.881220 TCCCCATATTGTCGTCCTTTTC 58.119 45.455 0.00 0.00 0.00 2.29
5978 6480 5.552178 AGCTCTTTTGTAGGTAACCTTCAG 58.448 41.667 0.00 0.00 32.76 3.02
5979 6481 5.548406 GAGCTCTTTTGTAGGTAACCTTCA 58.452 41.667 6.43 0.00 34.61 3.02
5991 6493 2.906354 ACAACTCACGAGCTCTTTTGT 58.094 42.857 12.85 7.50 0.00 2.83
6006 6508 9.220767 GTGGTATTTCTTTCTCTCATTACAACT 57.779 33.333 0.00 0.00 0.00 3.16
6045 6548 4.785914 TGGGGTCTTGACTCATGGTTATTA 59.214 41.667 2.89 0.00 0.00 0.98
6081 6584 8.985315 ATGAGATGCCATATGTTAAAGAAAGA 57.015 30.769 1.24 0.00 0.00 2.52
6082 6585 9.064706 AGATGAGATGCCATATGTTAAAGAAAG 57.935 33.333 1.24 0.00 0.00 2.62
6086 6589 9.445878 ACATAGATGAGATGCCATATGTTAAAG 57.554 33.333 1.24 0.00 27.19 1.85
6094 6597 6.676990 AGACAACATAGATGAGATGCCATA 57.323 37.500 0.00 0.00 0.00 2.74
6098 6601 8.502387 GGATAAAAGACAACATAGATGAGATGC 58.498 37.037 0.00 0.00 0.00 3.91
6143 6646 0.739112 GTGAGCACTGAGGCTACAGC 60.739 60.000 12.08 3.79 45.99 4.40
6145 6648 0.318441 GTGTGAGCACTGAGGCTACA 59.682 55.000 1.99 0.00 45.99 2.74
6175 6678 8.164153 CGCCTTAAGATTGACAAAATTCAAATG 58.836 33.333 3.36 0.00 38.95 2.32
6176 6679 7.872483 ACGCCTTAAGATTGACAAAATTCAAAT 59.128 29.630 3.36 0.00 38.95 2.32
6184 6687 3.078837 GGGACGCCTTAAGATTGACAAA 58.921 45.455 3.36 0.00 0.00 2.83
6204 6707 3.153130 TCTCATCTAATGCCGAGAGAGG 58.847 50.000 0.00 0.00 31.11 3.69
6216 6719 9.799106 AGGAAAAAGAACAGATTTCTCATCTAA 57.201 29.630 0.00 0.00 34.34 2.10
6231 6734 4.363138 CAAAGCCTCACAGGAAAAAGAAC 58.637 43.478 0.00 0.00 37.67 3.01
6249 6752 0.524816 GCATGCACATCTCGCCAAAG 60.525 55.000 14.21 0.00 0.00 2.77



Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.