Multiple sequence alignment - TraesCS2B01G289400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G289400 chr2B 100.000 8176 0 0 1 8176 399946087 399937912 0.000000e+00 15099.0
1 TraesCS2B01G289400 chr2B 81.068 412 56 20 7770 8176 681728589 681728983 7.970000e-80 309.0
2 TraesCS2B01G289400 chr2B 89.256 121 8 2 5359 5479 399940611 399940496 6.610000e-31 147.0
3 TraesCS2B01G289400 chr2B 89.256 121 8 2 5477 5592 399940729 399940609 6.610000e-31 147.0
4 TraesCS2B01G289400 chr2A 95.188 3741 104 17 3766 7489 439398277 439394596 0.000000e+00 5842.0
5 TraesCS2B01G289400 chr2A 96.125 2632 63 13 848 3470 439401665 439399064 0.000000e+00 4259.0
6 TraesCS2B01G289400 chr2A 96.337 273 8 2 3502 3772 439398752 439398480 1.620000e-121 448.0
7 TraesCS2B01G289400 chr2A 93.443 122 7 1 5359 5480 439396583 439396463 6.520000e-41 180.0
8 TraesCS2B01G289400 chr2A 90.517 116 6 2 5482 5592 439396696 439396581 1.840000e-31 148.0
9 TraesCS2B01G289400 chr2A 88.636 44 5 0 7770 7813 427335777 427335734 4.000000e-03 54.7
10 TraesCS2B01G289400 chr2D 95.873 3029 96 3 4465 7489 331757305 331754302 0.000000e+00 4874.0
11 TraesCS2B01G289400 chr2D 96.287 2936 72 18 848 3772 331766579 331763670 0.000000e+00 4783.0
12 TraesCS2B01G289400 chr2D 95.870 678 21 4 3766 4438 331763481 331762806 0.000000e+00 1090.0
13 TraesCS2B01G289400 chr2D 84.054 370 37 16 7814 8176 608381590 608381236 3.660000e-88 337.0
14 TraesCS2B01G289400 chr2D 90.083 121 7 2 5477 5592 331756411 331756291 1.420000e-32 152.0
15 TraesCS2B01G289400 chr2D 88.525 122 8 2 5359 5480 331756293 331756178 8.550000e-30 143.0
16 TraesCS2B01G289400 chr2D 90.000 60 6 0 785 844 331766702 331766643 2.450000e-10 78.7
17 TraesCS2B01G289400 chr5B 94.696 773 40 1 1 772 670784614 670783842 0.000000e+00 1199.0
18 TraesCS2B01G289400 chr5B 84.874 119 13 4 3655 3772 597851082 597850968 1.860000e-21 115.0
19 TraesCS2B01G289400 chr6B 92.516 775 51 4 1 772 262421830 262421060 0.000000e+00 1103.0
20 TraesCS2B01G289400 chr6B 95.294 85 3 1 3689 3772 224870734 224870650 5.150000e-27 134.0
21 TraesCS2B01G289400 chr6D 86.744 777 95 8 1 772 266413759 266414532 0.000000e+00 857.0
22 TraesCS2B01G289400 chr6D 84.677 620 89 4 1 616 266413141 266413758 1.510000e-171 614.0
23 TraesCS2B01G289400 chr6D 95.294 85 3 1 3689 3772 267532900 267532816 5.150000e-27 134.0
24 TraesCS2B01G289400 chr6D 93.258 89 5 1 3689 3776 249987127 249987215 6.660000e-26 130.0
25 TraesCS2B01G289400 chr3D 86.100 777 100 8 1 772 515680765 515679992 0.000000e+00 830.0
26 TraesCS2B01G289400 chr3D 80.409 342 65 2 66 406 120317946 120317606 8.140000e-65 259.0
27 TraesCS2B01G289400 chr5D 83.102 432 49 20 7751 8176 480964291 480963878 1.000000e-98 372.0
28 TraesCS2B01G289400 chr7A 82.452 416 50 21 7770 8176 647293448 647293047 7.860000e-90 342.0
29 TraesCS2B01G289400 chr7A 81.146 419 53 22 7769 8176 510904210 510904613 6.160000e-81 313.0
30 TraesCS2B01G289400 chr7A 92.701 137 9 1 4097 4232 201987162 201987026 6.470000e-46 196.0
31 TraesCS2B01G289400 chr7A 91.912 136 9 2 4099 4232 462978580 462978715 1.080000e-43 189.0
32 TraesCS2B01G289400 chr7A 94.318 88 4 1 3689 3775 386353709 386353622 5.150000e-27 134.0
33 TraesCS2B01G289400 chr7A 93.182 44 3 0 7770 7813 37377535 37377492 1.900000e-06 65.8
34 TraesCS2B01G289400 chr1D 83.651 367 45 11 7814 8176 249746219 249746574 1.700000e-86 331.0
35 TraesCS2B01G289400 chr7D 81.281 406 76 0 1 406 478184249 478183844 6.120000e-86 329.0
36 TraesCS2B01G289400 chr7D 94.531 128 7 0 4104 4231 42644592 42644719 1.800000e-46 198.0
37 TraesCS2B01G289400 chr7D 93.023 129 9 0 4104 4232 197927008 197927136 1.080000e-43 189.0
38 TraesCS2B01G289400 chr3B 81.234 389 73 0 15 403 446160550 446160162 1.710000e-81 315.0
39 TraesCS2B01G289400 chr3B 80.808 396 72 4 13 406 774791841 774791448 2.870000e-79 307.0
40 TraesCS2B01G289400 chr5A 82.415 381 46 18 7806 8176 59577724 59577355 6.160000e-81 313.0
41 TraesCS2B01G289400 chr5A 93.284 134 6 3 4101 4232 86662175 86662043 2.330000e-45 195.0
42 TraesCS2B01G289400 chr5A 88.816 152 14 1 4099 4247 358486305 358486456 5.040000e-42 183.0
43 TraesCS2B01G289400 chr5A 90.909 44 4 0 7770 7813 671440534 671440577 8.860000e-05 60.2
44 TraesCS2B01G289400 chr3A 82.609 368 44 17 7814 8176 602495336 602495688 2.870000e-79 307.0
45 TraesCS2B01G289400 chr4A 79.817 436 61 24 7750 8173 498270674 498271094 8.030000e-75 292.0
46 TraesCS2B01G289400 chr7B 91.971 137 11 0 4096 4232 155471327 155471191 8.370000e-45 193.0
47 TraesCS2B01G289400 chr7B 93.333 90 5 1 3689 3777 292832889 292832978 1.850000e-26 132.0
48 TraesCS2B01G289400 chr4B 91.473 129 11 0 4104 4232 106227561 106227433 2.340000e-40 178.0
49 TraesCS2B01G289400 chr6A 91.579 95 7 1 3689 3782 346585522 346585428 6.660000e-26 130.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G289400 chr2B 399937912 399946087 8175 True 15099.0 15099 100.000000 1 8176 1 chr2B.!!$R1 8175
1 TraesCS2B01G289400 chr2A 439394596 439401665 7069 True 2175.4 5842 94.322000 848 7489 5 chr2A.!!$R2 6641
2 TraesCS2B01G289400 chr2D 331762806 331766702 3896 True 1983.9 4783 94.052333 785 4438 3 chr2D.!!$R3 3653
3 TraesCS2B01G289400 chr2D 331754302 331757305 3003 True 1723.0 4874 91.493667 4465 7489 3 chr2D.!!$R2 3024
4 TraesCS2B01G289400 chr5B 670783842 670784614 772 True 1199.0 1199 94.696000 1 772 1 chr5B.!!$R2 771
5 TraesCS2B01G289400 chr6B 262421060 262421830 770 True 1103.0 1103 92.516000 1 772 1 chr6B.!!$R2 771
6 TraesCS2B01G289400 chr6D 266413141 266414532 1391 False 735.5 857 85.710500 1 772 2 chr6D.!!$F2 771
7 TraesCS2B01G289400 chr3D 515679992 515680765 773 True 830.0 830 86.100000 1 772 1 chr3D.!!$R2 771

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
779 1401 0.550638 TAAACCTAGGGGTGGGTGGG 60.551 60.000 14.81 0.0 46.67 4.61 F
1349 2032 0.320508 GTGTCCTCGTTCTGGGGTTC 60.321 60.000 0.00 0.0 0.00 3.62 F
1350 2033 1.080025 GTCCTCGTTCTGGGGTTCG 60.080 63.158 0.00 0.0 0.00 3.95 F
2390 3083 1.533625 TTGCCAACAAAGATCTCCCG 58.466 50.000 0.00 0.0 31.21 5.14 F
3781 4981 2.121291 TGTTCTGTTGAAGTGGCACA 57.879 45.000 21.41 0.0 32.15 4.57 F
5592 6808 0.621609 TTCCCTTGGGGTTCGTATGG 59.378 55.000 5.78 0.0 44.74 2.74 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1767 2455 1.555075 CTTCCTCGGTTTGGATGGAGA 59.445 52.381 0.00 0.0 33.09 3.71 R
3305 4001 1.154093 CACCAAAGATGCTGCTGCG 60.154 57.895 11.21 0.0 43.34 5.18 R
3368 4064 9.747898 ATTCCAAGTAAGTTACCAACAATGATA 57.252 29.630 9.46 0.0 0.00 2.15 R
4262 5471 1.736681 GCTCTGGCATGACTTTCTCAC 59.263 52.381 0.00 0.0 38.54 3.51 R
5747 6963 4.399219 GGCTACCCCTTGAAATATCCTTC 58.601 47.826 0.00 0.0 0.00 3.46 R
7502 8730 0.095935 CAAGCTCATCTGAAACGCGG 59.904 55.000 12.47 0.0 0.00 6.46 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
112 731 0.987294 ACTCTTGGATCACCACTGGG 59.013 55.000 0.00 0.00 46.80 4.45
265 884 1.014044 TCTGCTGAAGTAAAGCCGCG 61.014 55.000 0.00 0.00 40.06 6.46
397 1016 1.006281 AGCTTCATCCCTGCCAATTGA 59.994 47.619 7.12 0.00 0.00 2.57
411 1030 3.117888 GCCAATTGATCCTCCAGTCCTAA 60.118 47.826 7.12 0.00 0.00 2.69
480 1099 2.124693 CCCTCCTCTCCTCTGCGTC 61.125 68.421 0.00 0.00 0.00 5.19
501 1121 1.751927 GTCTCCCTCGCCCGTTCTA 60.752 63.158 0.00 0.00 0.00 2.10
506 1126 1.433879 CCTCGCCCGTTCTACTGAG 59.566 63.158 0.00 0.00 0.00 3.35
522 1142 1.194781 TGAGTCCCTCCACTTCCAGC 61.195 60.000 0.00 0.00 0.00 4.85
555 1175 0.882042 CCAGCATCCTTTCCGATCCG 60.882 60.000 0.00 0.00 0.00 4.18
569 1189 1.745320 GATCCGACATGCCCTACCGT 61.745 60.000 0.00 0.00 0.00 4.83
776 1398 3.430149 CCTAAACCTAGGGGTGGGT 57.570 57.895 14.81 0.00 46.67 4.51
777 1399 0.916809 CCTAAACCTAGGGGTGGGTG 59.083 60.000 14.81 0.00 46.67 4.61
778 1400 0.916809 CTAAACCTAGGGGTGGGTGG 59.083 60.000 14.81 0.00 46.67 4.61
779 1401 0.550638 TAAACCTAGGGGTGGGTGGG 60.551 60.000 14.81 0.00 46.67 4.61
780 1402 2.664652 AAACCTAGGGGTGGGTGGGT 62.665 60.000 14.81 0.00 46.67 4.51
781 1403 3.015145 CCTAGGGGTGGGTGGGTG 61.015 72.222 0.00 0.00 0.00 4.61
782 1404 3.015145 CTAGGGGTGGGTGGGTGG 61.015 72.222 0.00 0.00 0.00 4.61
783 1405 4.686437 TAGGGGTGGGTGGGTGGG 62.686 72.222 0.00 0.00 0.00 4.61
787 1409 2.761160 GGTGGGTGGGTGGGTTAG 59.239 66.667 0.00 0.00 0.00 2.34
791 1413 0.935194 TGGGTGGGTGGGTTAGTTTT 59.065 50.000 0.00 0.00 0.00 2.43
795 1417 3.564264 GGTGGGTGGGTTAGTTTTACAA 58.436 45.455 0.00 0.00 0.00 2.41
800 1422 6.480651 GTGGGTGGGTTAGTTTTACAATTTTG 59.519 38.462 0.00 0.00 0.00 2.44
803 1425 7.553402 GGGTGGGTTAGTTTTACAATTTTGTTT 59.447 33.333 0.63 0.00 42.35 2.83
807 1429 8.332464 GGGTTAGTTTTACAATTTTGTTTGAGC 58.668 33.333 0.63 0.00 42.35 4.26
844 1466 1.017701 GGACGCCGAACCCTAACTTG 61.018 60.000 0.00 0.00 0.00 3.16
845 1467 1.632948 GACGCCGAACCCTAACTTGC 61.633 60.000 0.00 0.00 0.00 4.01
846 1468 1.669760 CGCCGAACCCTAACTTGCA 60.670 57.895 0.00 0.00 0.00 4.08
895 1577 1.004436 GAATCCCCCAAACCCACCTA 58.996 55.000 0.00 0.00 0.00 3.08
896 1578 1.007607 AATCCCCCAAACCCACCTAG 58.992 55.000 0.00 0.00 0.00 3.02
1008 1690 2.186826 GCATCCCTAAATGCGCCGT 61.187 57.895 4.18 0.00 42.33 5.68
1053 1735 1.456518 CCTCCGCCTCCTCTCATCA 60.457 63.158 0.00 0.00 0.00 3.07
1304 1986 0.824759 ACCATCTCCCGCAGTAAGAC 59.175 55.000 0.00 0.00 0.00 3.01
1318 2001 0.834687 TAAGACCAGTGCCCCTTCGT 60.835 55.000 0.00 0.00 0.00 3.85
1349 2032 0.320508 GTGTCCTCGTTCTGGGGTTC 60.321 60.000 0.00 0.00 0.00 3.62
1350 2033 1.080025 GTCCTCGTTCTGGGGTTCG 60.080 63.158 0.00 0.00 0.00 3.95
1352 2035 1.080025 CCTCGTTCTGGGGTTCGTC 60.080 63.158 0.00 0.00 0.00 4.20
1494 2178 7.190871 TCCTTTTTGTTCTAAAAACTGCGTAG 58.809 34.615 0.00 0.00 0.00 3.51
1558 2246 3.131046 CGGCCATGCTTTTCTTAAGGAAT 59.869 43.478 2.24 0.00 33.53 3.01
1601 2289 9.547753 GTAATATACTTATGTGCTATGATGGGG 57.452 37.037 0.00 0.00 0.00 4.96
1636 2324 3.068165 TGCCTCTATATTGTGACTGGACG 59.932 47.826 0.00 0.00 0.00 4.79
1726 2414 8.674263 ATGCTTGAGAGGAAAATATTGTAGAG 57.326 34.615 0.00 0.00 0.00 2.43
1767 2455 6.814954 TTAGAGGACAGATGGAAGCTATTT 57.185 37.500 0.00 0.00 0.00 1.40
1995 2686 8.181904 TGCTTGAATTATTTCTCAAGGTTCTT 57.818 30.769 12.37 0.00 45.71 2.52
2248 2940 4.873746 TTCTTGACCTGGAGTGAAGTAG 57.126 45.455 0.00 0.00 40.29 2.57
2390 3083 1.533625 TTGCCAACAAAGATCTCCCG 58.466 50.000 0.00 0.00 31.21 5.14
2830 3525 6.204301 ACATTCACTATGCTGCATTAGTGATC 59.796 38.462 31.62 0.00 45.43 2.92
2863 3558 8.210946 TCGATCCTAATTGAAGGTGTTATTCAT 58.789 33.333 0.00 0.00 36.60 2.57
2875 3570 6.748132 AGGTGTTATTCATGAAAACCTGTTG 58.252 36.000 23.81 0.00 35.28 3.33
3305 4001 3.861840 TGCTGTTACAGGTCTTGCTATC 58.138 45.455 14.63 0.00 31.21 2.08
3368 4064 5.458654 CCCCATCTATGATCCAATTGGTTCT 60.459 44.000 27.81 18.67 35.47 3.01
3655 4645 2.280628 GCCATTTGAACTCTCTACCCG 58.719 52.381 0.00 0.00 0.00 5.28
3781 4981 2.121291 TGTTCTGTTGAAGTGGCACA 57.879 45.000 21.41 0.00 32.15 4.57
3951 5151 9.908152 AACTTTTATTTTGTAAGAGGTGCATAC 57.092 29.630 0.00 0.00 0.00 2.39
3967 5167 8.292444 AGGTGCATACTTTTATTTGATTGCTA 57.708 30.769 0.00 0.00 0.00 3.49
4112 5316 8.487028 CAACACTTCCTATTTATTACTCCCTCT 58.513 37.037 0.00 0.00 0.00 3.69
4262 5471 2.148768 GGAGTACCTGTGAAAAACCCG 58.851 52.381 0.00 0.00 0.00 5.28
4272 5481 3.375922 TGTGAAAAACCCGTGAGAAAGTC 59.624 43.478 0.00 0.00 0.00 3.01
4282 5491 1.736681 GTGAGAAAGTCATGCCAGAGC 59.263 52.381 0.00 0.00 37.56 4.09
4303 5512 3.911964 GCAACATGTTTGTTAGCCTAACG 59.088 43.478 8.77 0.00 44.24 3.18
4342 5551 9.676861 GTTTGGTTAGTATGGGATAAAACTAGT 57.323 33.333 0.00 0.00 0.00 2.57
4371 5580 7.836842 ACTACAACCAGTTTCACTTGAAAATT 58.163 30.769 5.98 0.00 44.58 1.82
4451 5661 5.892568 AGACTATTACAATGACTGTCGACC 58.107 41.667 14.12 0.00 39.64 4.79
4452 5662 5.417894 AGACTATTACAATGACTGTCGACCA 59.582 40.000 14.12 4.08 39.64 4.02
4552 5762 6.016943 CACAAATGGTTTCTGCAAAATCCATT 60.017 34.615 18.43 18.43 44.73 3.16
4646 5856 3.057033 GCATCTGTTTGTTCATTCCTGCT 60.057 43.478 0.00 0.00 0.00 4.24
4651 5861 3.890756 TGTTTGTTCATTCCTGCTCATGT 59.109 39.130 0.00 0.00 0.00 3.21
4759 5969 3.827817 AGGGCCATTGATGATCATGAT 57.172 42.857 14.30 8.25 0.00 2.45
4951 6161 9.859427 TTTAGATTCAAAGCAGAAATTGGTATG 57.141 29.630 0.00 0.00 36.24 2.39
5111 6321 6.587206 TCTATTTGTTGAATTGGCACATCA 57.413 33.333 0.00 0.00 39.30 3.07
5127 6339 7.921304 TGGCACATCATTCCTTAGTATATGAT 58.079 34.615 0.00 0.00 38.03 2.45
5268 6480 7.682459 TGGATGGCCCTATCATCTATTAACTTA 59.318 37.037 0.00 0.00 40.44 2.24
5592 6808 0.621609 TTCCCTTGGGGTTCGTATGG 59.378 55.000 5.78 0.00 44.74 2.74
5667 6883 4.404715 GTGCCAGTGAATACTAAGAGGGTA 59.595 45.833 0.00 0.00 34.74 3.69
5693 6909 6.317140 CCAAACTACTGCATGTGTATTCATCT 59.683 38.462 0.00 0.00 0.00 2.90
5706 6922 7.959733 TGTGTATTCATCTGTTATCACGAAAC 58.040 34.615 0.00 0.00 0.00 2.78
5747 6963 7.856556 TGGTATGCAAAACATGTATGTATACG 58.143 34.615 27.24 6.96 40.99 3.06
5843 7059 3.241701 GAGCTCATCTATACTCGCTTGC 58.758 50.000 9.40 0.00 0.00 4.01
5966 7182 1.305802 TGGACGTGGAGTATGGGCT 60.306 57.895 0.00 0.00 0.00 5.19
5993 7209 7.260558 ACAGGTGTCTTTTCTACTTTAAAGC 57.739 36.000 15.24 0.00 32.67 3.51
6135 7351 7.884816 TTGTCGAAATTCTAGGTAGTCTTTG 57.115 36.000 0.00 0.00 0.00 2.77
6213 7429 7.335422 AGTCAGTGATTGATGTTTAGTGGATTC 59.665 37.037 0.00 0.00 38.29 2.52
6302 7518 6.765989 TCATGCTAACTAGGCGTGATAAAAAT 59.234 34.615 9.51 0.00 46.54 1.82
6420 7636 8.624776 GTCTCAATAATCCTCCCAAAAATACAG 58.375 37.037 0.00 0.00 0.00 2.74
6563 7779 1.599576 GAGAGGAGGGGTTGCACTC 59.400 63.158 0.00 0.00 0.00 3.51
6961 8177 1.413077 GAGCTACGAAGGGTTATGGCT 59.587 52.381 0.00 0.00 0.00 4.75
6976 8192 2.916702 TGGCTGAGTATGGTATGCAG 57.083 50.000 0.00 0.00 0.00 4.41
7026 8242 5.181811 TGCTTGTTATCATGTTCTGACAAGG 59.818 40.000 20.46 10.53 39.66 3.61
7136 8352 2.012673 GTGCCTGGAATCAGACATGTC 58.987 52.381 18.47 18.47 43.49 3.06
7187 8403 5.344396 GCTTTCAGTTTAGAGCAGCAATTTC 59.656 40.000 0.00 0.00 35.29 2.17
7201 8417 9.143631 GAGCAGCAATTTCTGTACATTTTTATT 57.856 29.630 6.95 0.00 36.49 1.40
7267 8483 5.423015 TCTGATTTGTTCTATGACCTCTGC 58.577 41.667 0.00 0.00 0.00 4.26
7320 8536 3.427573 TGTCTCCCATGTAAGAACGAGA 58.572 45.455 0.00 0.00 0.00 4.04
7321 8537 4.023980 TGTCTCCCATGTAAGAACGAGAT 58.976 43.478 0.00 0.00 0.00 2.75
7322 8538 4.142160 TGTCTCCCATGTAAGAACGAGATG 60.142 45.833 0.00 0.00 0.00 2.90
7323 8539 3.126831 CTCCCATGTAAGAACGAGATGC 58.873 50.000 0.00 0.00 0.00 3.91
7324 8540 2.766263 TCCCATGTAAGAACGAGATGCT 59.234 45.455 0.00 0.00 0.00 3.79
7325 8541 3.197766 TCCCATGTAAGAACGAGATGCTT 59.802 43.478 0.00 0.00 0.00 3.91
7326 8542 4.404394 TCCCATGTAAGAACGAGATGCTTA 59.596 41.667 0.00 0.00 0.00 3.09
7327 8543 4.508124 CCCATGTAAGAACGAGATGCTTAC 59.492 45.833 0.00 0.00 42.52 2.34
7330 8546 5.386958 TGTAAGAACGAGATGCTTACAGT 57.613 39.130 9.78 0.00 45.17 3.55
7331 8547 6.505044 TGTAAGAACGAGATGCTTACAGTA 57.495 37.500 9.78 0.00 45.17 2.74
7381 8609 0.813610 TCTTGGTGCTCACGTGTTGG 60.814 55.000 16.51 8.37 0.00 3.77
7489 8717 4.342092 GCTGATAGGGTGGCAATTAAACAT 59.658 41.667 0.00 0.00 0.00 2.71
7490 8718 5.737063 GCTGATAGGGTGGCAATTAAACATG 60.737 44.000 0.00 0.00 0.00 3.21
7491 8719 5.268387 TGATAGGGTGGCAATTAAACATGT 58.732 37.500 0.00 0.00 0.00 3.21
7492 8720 5.719085 TGATAGGGTGGCAATTAAACATGTT 59.281 36.000 4.92 4.92 0.00 2.71
7493 8721 4.270245 AGGGTGGCAATTAAACATGTTG 57.730 40.909 12.82 0.36 0.00 3.33
7494 8722 3.007831 AGGGTGGCAATTAAACATGTTGG 59.992 43.478 12.82 1.26 0.00 3.77
7495 8723 3.244387 GGGTGGCAATTAAACATGTTGGT 60.244 43.478 12.82 0.00 0.00 3.67
7496 8724 4.384940 GGTGGCAATTAAACATGTTGGTT 58.615 39.130 12.82 4.77 0.00 3.67
7497 8725 4.450757 GGTGGCAATTAAACATGTTGGTTC 59.549 41.667 12.82 0.00 0.00 3.62
7498 8726 4.450757 GTGGCAATTAAACATGTTGGTTCC 59.549 41.667 12.82 9.44 0.00 3.62
7499 8727 4.000325 GGCAATTAAACATGTTGGTTCCC 59.000 43.478 12.82 3.62 0.00 3.97
7500 8728 4.000325 GCAATTAAACATGTTGGTTCCCC 59.000 43.478 12.82 0.00 0.00 4.81
7501 8729 4.241681 CAATTAAACATGTTGGTTCCCCG 58.758 43.478 12.82 0.00 0.00 5.73
7502 8730 1.249407 TAAACATGTTGGTTCCCCGC 58.751 50.000 12.82 0.00 0.00 6.13
7503 8731 1.468506 AAACATGTTGGTTCCCCGCC 61.469 55.000 12.82 0.00 0.00 6.13
7504 8732 3.439540 CATGTTGGTTCCCCGCCG 61.440 66.667 0.00 0.00 0.00 6.46
7515 8743 3.864686 CCCGCCGCGTTTCAGATG 61.865 66.667 12.58 0.00 0.00 2.90
7516 8744 2.813474 CCGCCGCGTTTCAGATGA 60.813 61.111 12.58 0.00 0.00 2.92
7517 8745 2.697425 CGCCGCGTTTCAGATGAG 59.303 61.111 4.92 0.00 0.00 2.90
7518 8746 2.401195 GCCGCGTTTCAGATGAGC 59.599 61.111 4.92 0.00 0.00 4.26
7519 8747 2.103042 GCCGCGTTTCAGATGAGCT 61.103 57.895 4.92 0.00 0.00 4.09
7520 8748 1.639298 GCCGCGTTTCAGATGAGCTT 61.639 55.000 4.92 0.00 0.00 3.74
7521 8749 0.095935 CCGCGTTTCAGATGAGCTTG 59.904 55.000 4.92 0.00 0.00 4.01
7522 8750 1.070821 CGCGTTTCAGATGAGCTTGA 58.929 50.000 0.00 0.00 0.00 3.02
7523 8751 1.060266 CGCGTTTCAGATGAGCTTGAG 59.940 52.381 0.00 0.00 0.00 3.02
7524 8752 2.072298 GCGTTTCAGATGAGCTTGAGT 58.928 47.619 0.00 0.00 0.00 3.41
7525 8753 3.254060 GCGTTTCAGATGAGCTTGAGTA 58.746 45.455 0.00 0.00 0.00 2.59
7526 8754 3.305629 GCGTTTCAGATGAGCTTGAGTAG 59.694 47.826 0.00 0.00 0.00 2.57
7544 8772 5.751243 AGTAGCAACTCAAAACAACGAAT 57.249 34.783 0.00 0.00 0.00 3.34
7545 8773 5.510671 AGTAGCAACTCAAAACAACGAATG 58.489 37.500 0.00 0.00 0.00 2.67
7546 8774 3.115554 AGCAACTCAAAACAACGAATGC 58.884 40.909 0.00 0.00 0.00 3.56
7547 8775 3.115554 GCAACTCAAAACAACGAATGCT 58.884 40.909 0.00 0.00 0.00 3.79
7548 8776 4.036262 AGCAACTCAAAACAACGAATGCTA 59.964 37.500 0.00 0.00 39.61 3.49
7549 8777 4.917415 GCAACTCAAAACAACGAATGCTAT 59.083 37.500 0.00 0.00 0.00 2.97
7550 8778 5.402270 GCAACTCAAAACAACGAATGCTATT 59.598 36.000 0.00 0.00 0.00 1.73
7551 8779 6.614162 GCAACTCAAAACAACGAATGCTATTG 60.614 38.462 0.00 0.00 0.00 1.90
7552 8780 6.312399 ACTCAAAACAACGAATGCTATTGA 57.688 33.333 0.00 0.00 31.46 2.57
7553 8781 6.734137 ACTCAAAACAACGAATGCTATTGAA 58.266 32.000 0.00 0.00 31.74 2.69
7554 8782 6.636850 ACTCAAAACAACGAATGCTATTGAAC 59.363 34.615 0.00 0.00 31.74 3.18
7555 8783 5.918011 TCAAAACAACGAATGCTATTGAACC 59.082 36.000 0.00 0.00 30.14 3.62
7556 8784 5.446143 AAACAACGAATGCTATTGAACCA 57.554 34.783 0.00 0.00 0.00 3.67
7557 8785 5.643379 AACAACGAATGCTATTGAACCAT 57.357 34.783 0.00 0.00 0.00 3.55
7558 8786 5.235305 ACAACGAATGCTATTGAACCATC 57.765 39.130 0.00 0.00 0.00 3.51
7559 8787 4.943705 ACAACGAATGCTATTGAACCATCT 59.056 37.500 0.00 0.00 0.00 2.90
7560 8788 6.112734 ACAACGAATGCTATTGAACCATCTA 58.887 36.000 0.00 0.00 0.00 1.98
7561 8789 6.767902 ACAACGAATGCTATTGAACCATCTAT 59.232 34.615 0.00 0.00 0.00 1.98
7562 8790 6.791887 ACGAATGCTATTGAACCATCTATG 57.208 37.500 0.00 0.00 0.00 2.23
7563 8791 5.180117 ACGAATGCTATTGAACCATCTATGC 59.820 40.000 0.00 0.00 0.00 3.14
7564 8792 5.410746 CGAATGCTATTGAACCATCTATGCT 59.589 40.000 0.00 0.00 0.00 3.79
7565 8793 6.591448 CGAATGCTATTGAACCATCTATGCTA 59.409 38.462 0.00 0.00 0.00 3.49
7566 8794 7.279536 CGAATGCTATTGAACCATCTATGCTAT 59.720 37.037 0.00 0.00 0.00 2.97
7567 8795 9.605275 GAATGCTATTGAACCATCTATGCTATA 57.395 33.333 0.00 0.00 0.00 1.31
7588 8816 8.179148 CTATATAAGCTGCTCGGAATTTACTG 57.821 38.462 1.00 0.00 0.00 2.74
7589 8817 2.029838 AGCTGCTCGGAATTTACTGG 57.970 50.000 0.00 0.00 0.00 4.00
7590 8818 1.279271 AGCTGCTCGGAATTTACTGGT 59.721 47.619 0.00 0.00 0.00 4.00
7591 8819 1.666189 GCTGCTCGGAATTTACTGGTC 59.334 52.381 0.00 0.00 0.00 4.02
7592 8820 2.935238 GCTGCTCGGAATTTACTGGTCA 60.935 50.000 0.00 0.00 0.00 4.02
7593 8821 3.535561 CTGCTCGGAATTTACTGGTCAT 58.464 45.455 0.00 0.00 0.00 3.06
7594 8822 4.693283 CTGCTCGGAATTTACTGGTCATA 58.307 43.478 0.00 0.00 0.00 2.15
7595 8823 5.290493 TGCTCGGAATTTACTGGTCATAT 57.710 39.130 0.00 0.00 0.00 1.78
7596 8824 5.056480 TGCTCGGAATTTACTGGTCATATG 58.944 41.667 0.00 0.00 0.00 1.78
7597 8825 4.452455 GCTCGGAATTTACTGGTCATATGG 59.548 45.833 2.13 0.00 0.00 2.74
7598 8826 4.968259 TCGGAATTTACTGGTCATATGGG 58.032 43.478 2.13 0.00 0.00 4.00
7599 8827 4.410883 TCGGAATTTACTGGTCATATGGGT 59.589 41.667 2.13 0.50 0.00 4.51
7600 8828 4.515191 CGGAATTTACTGGTCATATGGGTG 59.485 45.833 2.13 0.00 0.00 4.61
7601 8829 4.278419 GGAATTTACTGGTCATATGGGTGC 59.722 45.833 2.13 0.00 0.00 5.01
7602 8830 4.518278 ATTTACTGGTCATATGGGTGCA 57.482 40.909 2.13 0.00 0.00 4.57
7603 8831 4.518278 TTTACTGGTCATATGGGTGCAT 57.482 40.909 2.13 0.00 0.00 3.96
7604 8832 4.518278 TTACTGGTCATATGGGTGCATT 57.482 40.909 2.13 0.00 0.00 3.56
7605 8833 2.658285 ACTGGTCATATGGGTGCATTG 58.342 47.619 2.13 0.00 0.00 2.82
7606 8834 2.025037 ACTGGTCATATGGGTGCATTGT 60.025 45.455 2.13 0.00 0.00 2.71
7607 8835 3.201930 ACTGGTCATATGGGTGCATTGTA 59.798 43.478 2.13 0.00 0.00 2.41
7608 8836 4.141181 ACTGGTCATATGGGTGCATTGTAT 60.141 41.667 2.13 0.00 0.00 2.29
7609 8837 4.802307 TGGTCATATGGGTGCATTGTATT 58.198 39.130 2.13 0.00 0.00 1.89
7610 8838 5.207354 TGGTCATATGGGTGCATTGTATTT 58.793 37.500 2.13 0.00 0.00 1.40
7611 8839 5.301551 TGGTCATATGGGTGCATTGTATTTC 59.698 40.000 2.13 0.00 0.00 2.17
7612 8840 5.536161 GGTCATATGGGTGCATTGTATTTCT 59.464 40.000 2.13 0.00 0.00 2.52
7613 8841 6.441274 GTCATATGGGTGCATTGTATTTCTG 58.559 40.000 2.13 0.00 0.00 3.02
7614 8842 6.039717 GTCATATGGGTGCATTGTATTTCTGT 59.960 38.462 2.13 0.00 0.00 3.41
7615 8843 4.989279 ATGGGTGCATTGTATTTCTGTC 57.011 40.909 0.00 0.00 0.00 3.51
7616 8844 4.032960 TGGGTGCATTGTATTTCTGTCT 57.967 40.909 0.00 0.00 0.00 3.41
7617 8845 3.758023 TGGGTGCATTGTATTTCTGTCTG 59.242 43.478 0.00 0.00 0.00 3.51
7618 8846 3.129287 GGGTGCATTGTATTTCTGTCTGG 59.871 47.826 0.00 0.00 0.00 3.86
7619 8847 4.009675 GGTGCATTGTATTTCTGTCTGGA 58.990 43.478 0.00 0.00 0.00 3.86
7620 8848 4.458989 GGTGCATTGTATTTCTGTCTGGAA 59.541 41.667 0.00 0.00 0.00 3.53
7621 8849 5.126061 GGTGCATTGTATTTCTGTCTGGAAT 59.874 40.000 0.00 0.00 0.00 3.01
7622 8850 6.350445 GGTGCATTGTATTTCTGTCTGGAATT 60.350 38.462 0.00 0.00 0.00 2.17
7623 8851 7.148086 GGTGCATTGTATTTCTGTCTGGAATTA 60.148 37.037 0.00 0.00 0.00 1.40
7624 8852 7.912250 GTGCATTGTATTTCTGTCTGGAATTAG 59.088 37.037 0.00 0.00 0.00 1.73
7625 8853 7.828717 TGCATTGTATTTCTGTCTGGAATTAGA 59.171 33.333 0.00 0.00 0.00 2.10
7626 8854 8.341173 GCATTGTATTTCTGTCTGGAATTAGAG 58.659 37.037 0.00 0.00 0.00 2.43
7627 8855 9.388506 CATTGTATTTCTGTCTGGAATTAGAGT 57.611 33.333 0.00 0.00 0.00 3.24
7630 8858 9.871238 TGTATTTCTGTCTGGAATTAGAGTAAC 57.129 33.333 0.00 0.00 0.00 2.50
7631 8859 9.871238 GTATTTCTGTCTGGAATTAGAGTAACA 57.129 33.333 0.00 0.00 0.00 2.41
7632 8860 8.779354 ATTTCTGTCTGGAATTAGAGTAACAC 57.221 34.615 0.00 0.00 0.00 3.32
7633 8861 7.540474 TTCTGTCTGGAATTAGAGTAACACT 57.460 36.000 0.00 0.00 0.00 3.55
7634 8862 7.540474 TCTGTCTGGAATTAGAGTAACACTT 57.460 36.000 0.00 0.00 0.00 3.16
7635 8863 7.963532 TCTGTCTGGAATTAGAGTAACACTTT 58.036 34.615 0.00 0.00 0.00 2.66
7636 8864 7.872993 TCTGTCTGGAATTAGAGTAACACTTTG 59.127 37.037 0.00 0.00 0.00 2.77
7637 8865 6.934645 TGTCTGGAATTAGAGTAACACTTTGG 59.065 38.462 0.00 0.00 0.00 3.28
7638 8866 6.935208 GTCTGGAATTAGAGTAACACTTTGGT 59.065 38.462 0.00 0.00 0.00 3.67
7639 8867 7.117956 GTCTGGAATTAGAGTAACACTTTGGTC 59.882 40.741 0.00 0.00 0.00 4.02
7640 8868 6.833041 TGGAATTAGAGTAACACTTTGGTCA 58.167 36.000 0.00 0.00 0.00 4.02
7641 8869 7.458397 TGGAATTAGAGTAACACTTTGGTCAT 58.542 34.615 0.00 0.00 0.00 3.06
7642 8870 8.598916 TGGAATTAGAGTAACACTTTGGTCATA 58.401 33.333 0.00 0.00 0.00 2.15
7643 8871 8.880750 GGAATTAGAGTAACACTTTGGTCATAC 58.119 37.037 0.00 0.00 0.00 2.39
7644 8872 9.431887 GAATTAGAGTAACACTTTGGTCATACA 57.568 33.333 0.00 0.00 0.00 2.29
7645 8873 9.959721 AATTAGAGTAACACTTTGGTCATACAT 57.040 29.630 0.00 0.00 0.00 2.29
7646 8874 8.771920 TTAGAGTAACACTTTGGTCATACATG 57.228 34.615 0.00 0.00 0.00 3.21
7647 8875 6.173339 AGAGTAACACTTTGGTCATACATGG 58.827 40.000 0.00 0.00 0.00 3.66
7648 8876 5.253330 AGTAACACTTTGGTCATACATGGG 58.747 41.667 0.00 0.00 0.00 4.00
7649 8877 4.380843 AACACTTTGGTCATACATGGGA 57.619 40.909 0.00 0.00 0.00 4.37
7650 8878 4.591321 ACACTTTGGTCATACATGGGAT 57.409 40.909 0.00 0.00 0.00 3.85
7651 8879 4.934356 ACACTTTGGTCATACATGGGATT 58.066 39.130 0.00 0.00 0.00 3.01
7652 8880 5.332743 ACACTTTGGTCATACATGGGATTT 58.667 37.500 0.00 0.00 0.00 2.17
7653 8881 5.185635 ACACTTTGGTCATACATGGGATTTG 59.814 40.000 0.00 0.00 0.00 2.32
7654 8882 4.711355 ACTTTGGTCATACATGGGATTTGG 59.289 41.667 0.00 0.00 0.00 3.28
7655 8883 4.599720 TTGGTCATACATGGGATTTGGA 57.400 40.909 0.00 0.00 0.00 3.53
7656 8884 4.169059 TGGTCATACATGGGATTTGGAG 57.831 45.455 0.00 0.00 0.00 3.86
7657 8885 3.117550 TGGTCATACATGGGATTTGGAGG 60.118 47.826 0.00 0.00 0.00 4.30
7658 8886 3.117512 GGTCATACATGGGATTTGGAGGT 60.118 47.826 0.00 0.00 0.00 3.85
7659 8887 4.104102 GGTCATACATGGGATTTGGAGGTA 59.896 45.833 0.00 0.00 0.00 3.08
7660 8888 5.063880 GTCATACATGGGATTTGGAGGTAC 58.936 45.833 0.00 0.00 0.00 3.34
7662 8890 3.652057 ACATGGGATTTGGAGGTACTG 57.348 47.619 0.00 0.00 41.55 2.74
7663 8891 2.242196 ACATGGGATTTGGAGGTACTGG 59.758 50.000 0.00 0.00 41.55 4.00
7664 8892 1.295020 TGGGATTTGGAGGTACTGGG 58.705 55.000 0.00 0.00 41.55 4.45
7665 8893 1.203505 TGGGATTTGGAGGTACTGGGA 60.204 52.381 0.00 0.00 41.55 4.37
7666 8894 1.490910 GGGATTTGGAGGTACTGGGAG 59.509 57.143 0.00 0.00 41.55 4.30
7667 8895 2.478292 GGATTTGGAGGTACTGGGAGA 58.522 52.381 0.00 0.00 41.55 3.71
7668 8896 2.436173 GGATTTGGAGGTACTGGGAGAG 59.564 54.545 0.00 0.00 41.55 3.20
7669 8897 1.952621 TTTGGAGGTACTGGGAGAGG 58.047 55.000 0.00 0.00 41.55 3.69
7670 8898 1.089978 TTGGAGGTACTGGGAGAGGA 58.910 55.000 0.00 0.00 41.55 3.71
7671 8899 0.335361 TGGAGGTACTGGGAGAGGAC 59.665 60.000 0.00 0.00 41.55 3.85
7672 8900 0.632294 GGAGGTACTGGGAGAGGACT 59.368 60.000 0.00 0.00 41.55 3.85
7673 8901 1.007359 GGAGGTACTGGGAGAGGACTT 59.993 57.143 0.00 0.00 41.55 3.01
7674 8902 2.560158 GGAGGTACTGGGAGAGGACTTT 60.560 54.545 0.00 0.00 41.55 2.66
7675 8903 3.174779 GAGGTACTGGGAGAGGACTTTT 58.825 50.000 0.00 0.00 41.55 2.27
7676 8904 3.583526 GAGGTACTGGGAGAGGACTTTTT 59.416 47.826 0.00 0.00 41.55 1.94
7769 8997 2.193786 AAAAACGGGAGCACGGGT 59.806 55.556 0.00 0.00 38.39 5.28
7770 8998 1.454295 AAAAACGGGAGCACGGGTT 60.454 52.632 0.00 0.00 38.39 4.11
7771 8999 1.038681 AAAAACGGGAGCACGGGTTT 61.039 50.000 0.00 0.00 40.56 3.27
7772 9000 1.038681 AAAACGGGAGCACGGGTTTT 61.039 50.000 0.00 7.68 36.04 2.43
7773 9001 1.038681 AAACGGGAGCACGGGTTTTT 61.039 50.000 0.00 0.00 38.39 1.94
7790 9018 2.631160 TTTTCCTTCCGCAAGAGTCA 57.369 45.000 0.00 0.00 43.02 3.41
7791 9019 2.859165 TTTCCTTCCGCAAGAGTCAT 57.141 45.000 0.00 0.00 43.02 3.06
7792 9020 2.099141 TTCCTTCCGCAAGAGTCATG 57.901 50.000 0.00 0.00 43.02 3.07
7793 9021 0.250234 TCCTTCCGCAAGAGTCATGG 59.750 55.000 0.00 0.00 43.02 3.66
7794 9022 0.036010 CCTTCCGCAAGAGTCATGGT 60.036 55.000 0.00 0.00 43.02 3.55
7795 9023 1.611673 CCTTCCGCAAGAGTCATGGTT 60.612 52.381 0.00 0.00 43.02 3.67
7796 9024 2.154462 CTTCCGCAAGAGTCATGGTTT 58.846 47.619 0.00 0.00 43.02 3.27
7797 9025 2.270352 TCCGCAAGAGTCATGGTTTT 57.730 45.000 0.00 0.00 43.02 2.43
7798 9026 1.879380 TCCGCAAGAGTCATGGTTTTG 59.121 47.619 0.00 0.00 43.02 2.44
7799 9027 1.666888 CCGCAAGAGTCATGGTTTTGC 60.667 52.381 11.76 11.76 40.40 3.68
7800 9028 1.267806 CGCAAGAGTCATGGTTTTGCT 59.732 47.619 16.69 0.00 41.34 3.91
7801 9029 2.666619 CGCAAGAGTCATGGTTTTGCTC 60.667 50.000 16.69 6.50 41.34 4.26
7802 9030 2.352127 GCAAGAGTCATGGTTTTGCTCC 60.352 50.000 13.56 0.00 40.58 4.70
7803 9031 2.206576 AGAGTCATGGTTTTGCTCCC 57.793 50.000 0.00 0.00 0.00 4.30
7804 9032 0.804989 GAGTCATGGTTTTGCTCCCG 59.195 55.000 0.00 0.00 0.00 5.14
7805 9033 1.212751 GTCATGGTTTTGCTCCCGC 59.787 57.895 0.00 0.00 0.00 6.13
7806 9034 2.179018 CATGGTTTTGCTCCCGCG 59.821 61.111 0.00 0.00 39.65 6.46
7807 9035 2.033448 ATGGTTTTGCTCCCGCGA 59.967 55.556 8.23 0.00 39.65 5.87
7808 9036 2.040544 ATGGTTTTGCTCCCGCGAG 61.041 57.895 8.23 0.00 39.65 5.03
7809 9037 2.358247 GGTTTTGCTCCCGCGAGA 60.358 61.111 8.23 0.00 38.52 4.04
7810 9038 2.391389 GGTTTTGCTCCCGCGAGAG 61.391 63.158 13.96 13.96 38.52 3.20
7811 9039 2.047274 TTTTGCTCCCGCGAGAGG 60.047 61.111 19.76 6.66 38.52 3.69
7812 9040 4.760047 TTTGCTCCCGCGAGAGGC 62.760 66.667 19.76 11.85 38.52 4.70
7819 9047 4.379243 CCGCGAGAGGCCACAACT 62.379 66.667 8.23 0.00 38.94 3.16
7820 9048 3.114616 CGCGAGAGGCCACAACTG 61.115 66.667 5.01 0.00 38.94 3.16
7821 9049 2.031163 GCGAGAGGCCACAACTGT 59.969 61.111 5.01 0.00 34.80 3.55
7822 9050 2.320587 GCGAGAGGCCACAACTGTG 61.321 63.158 5.01 2.72 45.23 3.66
7823 9051 2.320587 CGAGAGGCCACAACTGTGC 61.321 63.158 5.01 0.71 44.34 4.57
7824 9052 1.968540 GAGAGGCCACAACTGTGCC 60.969 63.158 5.01 9.24 44.34 5.01
7826 9054 2.113986 AGGCCACAACTGTGCCTC 59.886 61.111 5.01 4.43 43.80 4.70
7827 9055 2.113986 GGCCACAACTGTGCCTCT 59.886 61.111 0.00 0.00 44.34 3.69
7828 9056 1.968540 GGCCACAACTGTGCCTCTC 60.969 63.158 0.00 0.00 44.34 3.20
7829 9057 2.320587 GCCACAACTGTGCCTCTCG 61.321 63.158 4.23 0.00 44.34 4.04
7830 9058 2.320587 CCACAACTGTGCCTCTCGC 61.321 63.158 4.23 0.00 44.34 5.03
7831 9059 2.356313 ACAACTGTGCCTCTCGCG 60.356 61.111 0.00 0.00 42.08 5.87
7832 9060 3.114616 CAACTGTGCCTCTCGCGG 61.115 66.667 6.13 0.00 42.08 6.46
7833 9061 4.379243 AACTGTGCCTCTCGCGGG 62.379 66.667 6.13 1.01 42.08 6.13
7835 9063 4.504916 CTGTGCCTCTCGCGGGAG 62.505 72.222 29.27 29.27 42.08 4.30
7847 9075 4.779475 CGGGAGCAAACTGTGACT 57.221 55.556 0.00 0.00 0.00 3.41
7848 9076 2.533318 CGGGAGCAAACTGTGACTC 58.467 57.895 0.00 0.00 32.66 3.36
7849 9077 0.034059 CGGGAGCAAACTGTGACTCT 59.966 55.000 5.36 0.00 33.46 3.24
7850 9078 1.802069 GGGAGCAAACTGTGACTCTC 58.198 55.000 5.36 0.00 33.46 3.20
7851 9079 1.423395 GGAGCAAACTGTGACTCTCG 58.577 55.000 5.36 0.00 33.46 4.04
7852 9080 0.787183 GAGCAAACTGTGACTCTCGC 59.213 55.000 0.00 0.00 31.50 5.03
7853 9081 0.941463 AGCAAACTGTGACTCTCGCG 60.941 55.000 0.00 0.00 0.00 5.87
7854 9082 1.891060 GCAAACTGTGACTCTCGCGG 61.891 60.000 6.13 0.00 39.10 6.46
7855 9083 0.318699 CAAACTGTGACTCTCGCGGA 60.319 55.000 6.13 1.01 36.77 5.54
7856 9084 0.387929 AAACTGTGACTCTCGCGGAA 59.612 50.000 6.13 0.00 36.77 4.30
7857 9085 0.039074 AACTGTGACTCTCGCGGAAG 60.039 55.000 6.13 6.70 36.77 3.46
7858 9086 1.153939 CTGTGACTCTCGCGGAAGG 60.154 63.158 6.13 0.00 35.34 3.46
7859 9087 2.182030 GTGACTCTCGCGGAAGGG 59.818 66.667 6.13 0.00 46.71 3.95
7884 9112 4.877323 AAAAGAAGAGAAAACGCGTTCT 57.123 36.364 26.77 19.54 40.62 3.01
7885 9113 4.877323 AAAGAAGAGAAAACGCGTTCTT 57.123 36.364 26.77 23.23 37.98 2.52
7886 9114 4.877323 AAGAAGAGAAAACGCGTTCTTT 57.123 36.364 26.77 17.13 37.98 2.52
7887 9115 4.877323 AGAAGAGAAAACGCGTTCTTTT 57.123 36.364 26.77 19.64 37.98 2.27
7888 9116 4.834234 AGAAGAGAAAACGCGTTCTTTTC 58.166 39.130 26.77 25.86 43.80 2.29
7889 9117 3.604065 AGAGAAAACGCGTTCTTTTCC 57.396 42.857 26.77 17.21 37.98 3.13
7890 9118 2.289820 AGAGAAAACGCGTTCTTTTCCC 59.710 45.455 26.77 15.91 37.98 3.97
7891 9119 1.003223 AGAAAACGCGTTCTTTTCCCG 60.003 47.619 26.77 0.00 38.05 5.14
7892 9120 0.734309 AAAACGCGTTCTTTTCCCGT 59.266 45.000 26.77 2.60 0.00 5.28
7893 9121 0.734309 AAACGCGTTCTTTTCCCGTT 59.266 45.000 26.77 1.74 43.03 4.44
7894 9122 0.734309 AACGCGTTCTTTTCCCGTTT 59.266 45.000 20.79 0.00 38.79 3.60
7895 9123 0.305617 ACGCGTTCTTTTCCCGTTTC 59.694 50.000 5.58 0.00 0.00 2.78
7896 9124 0.385098 CGCGTTCTTTTCCCGTTTCC 60.385 55.000 0.00 0.00 0.00 3.13
7897 9125 0.385098 GCGTTCTTTTCCCGTTTCCG 60.385 55.000 0.00 0.00 0.00 4.30
7898 9126 1.219646 CGTTCTTTTCCCGTTTCCGA 58.780 50.000 0.00 0.00 35.63 4.55
7899 9127 1.802365 CGTTCTTTTCCCGTTTCCGAT 59.198 47.619 0.00 0.00 35.63 4.18
7900 9128 2.412325 CGTTCTTTTCCCGTTTCCGATG 60.412 50.000 0.00 0.00 35.63 3.84
7901 9129 2.809696 GTTCTTTTCCCGTTTCCGATGA 59.190 45.455 0.00 0.00 35.63 2.92
7902 9130 2.695359 TCTTTTCCCGTTTCCGATGAG 58.305 47.619 0.00 0.00 35.63 2.90
7903 9131 1.737793 CTTTTCCCGTTTCCGATGAGG 59.262 52.381 0.00 0.00 42.97 3.86
7904 9132 0.675522 TTTCCCGTTTCCGATGAGGC 60.676 55.000 0.00 0.00 40.77 4.70
7905 9133 1.832719 TTCCCGTTTCCGATGAGGCA 61.833 55.000 0.00 0.00 40.77 4.75
7906 9134 1.153168 CCCGTTTCCGATGAGGCAT 60.153 57.895 0.00 0.00 40.77 4.40
7907 9135 1.439353 CCCGTTTCCGATGAGGCATG 61.439 60.000 0.00 0.00 40.77 4.06
7908 9136 1.439353 CCGTTTCCGATGAGGCATGG 61.439 60.000 0.00 0.00 40.77 3.66
7909 9137 1.729881 GTTTCCGATGAGGCATGGC 59.270 57.895 12.14 12.14 40.77 4.40
7910 9138 0.749454 GTTTCCGATGAGGCATGGCT 60.749 55.000 23.58 23.58 40.77 4.75
7911 9139 0.749091 TTTCCGATGAGGCATGGCTG 60.749 55.000 28.55 11.97 40.77 4.85
7912 9140 1.913951 TTCCGATGAGGCATGGCTGT 61.914 55.000 28.55 15.04 40.77 4.40
7913 9141 2.184830 CCGATGAGGCATGGCTGTG 61.185 63.158 28.55 12.56 0.00 3.66
7914 9142 1.153309 CGATGAGGCATGGCTGTGA 60.153 57.895 28.55 10.60 0.00 3.58
7915 9143 1.434622 CGATGAGGCATGGCTGTGAC 61.435 60.000 28.55 12.69 0.00 3.67
7916 9144 0.107312 GATGAGGCATGGCTGTGACT 60.107 55.000 28.55 0.18 41.12 3.41
7917 9145 0.330604 ATGAGGCATGGCTGTGACTT 59.669 50.000 28.55 7.38 37.66 3.01
7918 9146 0.111061 TGAGGCATGGCTGTGACTTT 59.889 50.000 28.55 0.00 37.66 2.66
7919 9147 0.807496 GAGGCATGGCTGTGACTTTC 59.193 55.000 28.55 5.78 37.66 2.62
7920 9148 0.957395 AGGCATGGCTGTGACTTTCG 60.957 55.000 22.69 0.00 32.09 3.46
7921 9149 1.154150 GCATGGCTGTGACTTTCGC 60.154 57.895 0.00 0.00 0.00 4.70
7922 9150 1.133253 CATGGCTGTGACTTTCGCG 59.867 57.895 0.00 0.00 0.00 5.87
7923 9151 1.005037 ATGGCTGTGACTTTCGCGA 60.005 52.632 3.71 3.71 0.00 5.87
7924 9152 0.602638 ATGGCTGTGACTTTCGCGAA 60.603 50.000 19.38 19.38 0.00 4.70
7925 9153 0.812014 TGGCTGTGACTTTCGCGAAA 60.812 50.000 30.47 30.47 0.00 3.46
7944 9172 2.639286 CACAACCGTGCCTCTTGC 59.361 61.111 0.00 0.00 36.06 4.01
7945 9173 2.972505 ACAACCGTGCCTCTTGCG 60.973 61.111 0.00 0.00 45.60 4.85
7961 9189 4.914291 CGGAAGCAAAACCGTGAC 57.086 55.556 0.00 0.00 43.53 3.67
7962 9190 2.317230 CGGAAGCAAAACCGTGACT 58.683 52.632 0.00 0.00 43.53 3.41
7963 9191 0.234884 CGGAAGCAAAACCGTGACTC 59.765 55.000 0.00 0.00 43.53 3.36
7964 9192 0.234884 GGAAGCAAAACCGTGACTCG 59.765 55.000 0.00 0.00 39.52 4.18
7965 9193 0.935196 GAAGCAAAACCGTGACTCGT 59.065 50.000 0.00 0.00 37.94 4.18
7966 9194 0.655733 AAGCAAAACCGTGACTCGTG 59.344 50.000 0.00 0.00 37.94 4.35
7967 9195 1.368850 GCAAAACCGTGACTCGTGC 60.369 57.895 0.00 0.00 37.94 5.34
7968 9196 2.010670 CAAAACCGTGACTCGTGCA 58.989 52.632 0.00 0.00 37.94 4.57
7969 9197 0.375454 CAAAACCGTGACTCGTGCAA 59.625 50.000 0.00 0.00 37.94 4.08
7970 9198 0.655733 AAAACCGTGACTCGTGCAAG 59.344 50.000 0.00 0.00 37.94 4.01
7971 9199 1.157870 AAACCGTGACTCGTGCAAGG 61.158 55.000 0.00 10.47 40.18 3.61
7972 9200 2.738521 CCGTGACTCGTGCAAGGG 60.739 66.667 0.00 0.00 37.94 3.95
7973 9201 2.338620 CGTGACTCGTGCAAGGGA 59.661 61.111 6.49 0.00 34.52 4.20
7974 9202 1.734477 CGTGACTCGTGCAAGGGAG 60.734 63.158 6.49 7.81 36.36 4.30
7975 9203 1.374758 GTGACTCGTGCAAGGGAGG 60.375 63.158 6.49 0.00 34.58 4.30
7976 9204 1.533033 TGACTCGTGCAAGGGAGGA 60.533 57.895 6.49 0.00 34.58 3.71
7977 9205 1.118965 TGACTCGTGCAAGGGAGGAA 61.119 55.000 6.49 0.00 34.58 3.36
7978 9206 0.034896 GACTCGTGCAAGGGAGGAAA 59.965 55.000 6.49 0.00 34.58 3.13
7979 9207 0.472471 ACTCGTGCAAGGGAGGAAAA 59.528 50.000 6.49 0.00 34.58 2.29
7980 9208 1.133915 ACTCGTGCAAGGGAGGAAAAA 60.134 47.619 6.49 0.00 34.58 1.94
8045 9273 8.871686 TTTTTGATCAAAAAGCTAAGGAAGAC 57.128 30.769 32.54 0.00 43.08 3.01
8046 9274 6.575162 TTGATCAAAAAGCTAAGGAAGACC 57.425 37.500 5.45 0.00 0.00 3.85
8047 9275 4.695455 TGATCAAAAAGCTAAGGAAGACCG 59.305 41.667 0.00 0.00 41.83 4.79
8048 9276 3.408634 TCAAAAAGCTAAGGAAGACCGG 58.591 45.455 0.00 0.00 41.83 5.28
8049 9277 3.146847 CAAAAAGCTAAGGAAGACCGGT 58.853 45.455 6.92 6.92 41.83 5.28
8050 9278 2.474410 AAAGCTAAGGAAGACCGGTG 57.526 50.000 14.63 0.00 41.83 4.94
8051 9279 0.613777 AAGCTAAGGAAGACCGGTGG 59.386 55.000 14.63 0.00 41.83 4.61
8052 9280 0.252103 AGCTAAGGAAGACCGGTGGA 60.252 55.000 14.63 0.00 41.83 4.02
8053 9281 0.611714 GCTAAGGAAGACCGGTGGAA 59.388 55.000 14.63 0.00 41.83 3.53
8054 9282 1.002773 GCTAAGGAAGACCGGTGGAAA 59.997 52.381 14.63 0.00 41.83 3.13
8055 9283 2.551504 GCTAAGGAAGACCGGTGGAAAA 60.552 50.000 14.63 0.00 41.83 2.29
8056 9284 1.977056 AAGGAAGACCGGTGGAAAAC 58.023 50.000 14.63 0.00 41.83 2.43
8057 9285 0.109913 AGGAAGACCGGTGGAAAACC 59.890 55.000 14.63 6.78 46.60 3.27
8070 9298 5.593183 GTGGAAAACCAAAACGTTGAAAA 57.407 34.783 0.00 0.00 36.83 2.29
8071 9299 5.986936 GTGGAAAACCAAAACGTTGAAAAA 58.013 33.333 0.00 0.00 36.83 1.94
8112 9340 2.222007 AAAAGCTGAAAACGCATGCA 57.778 40.000 19.57 0.00 0.00 3.96
8113 9341 2.222007 AAAGCTGAAAACGCATGCAA 57.778 40.000 19.57 0.00 0.00 4.08
8114 9342 2.222007 AAGCTGAAAACGCATGCAAA 57.778 40.000 19.57 0.00 0.00 3.68
8115 9343 2.222007 AGCTGAAAACGCATGCAAAA 57.778 40.000 19.57 0.00 0.00 2.44
8116 9344 2.548875 AGCTGAAAACGCATGCAAAAA 58.451 38.095 19.57 0.00 0.00 1.94
8164 9392 4.383602 GCGCGACACGTGGCAAAT 62.384 61.111 23.63 0.00 46.11 2.32
8165 9393 2.499520 CGCGACACGTGGCAAATG 60.500 61.111 23.63 5.86 36.87 2.32
8166 9394 2.126888 GCGACACGTGGCAAATGG 60.127 61.111 23.63 5.43 34.31 3.16
8167 9395 2.126888 CGACACGTGGCAAATGGC 60.127 61.111 23.63 0.00 43.74 4.40
8168 9396 2.616330 CGACACGTGGCAAATGGCT 61.616 57.895 23.63 0.00 44.01 4.75
8169 9397 1.081242 GACACGTGGCAAATGGCTG 60.081 57.895 18.77 3.73 44.01 4.85
8170 9398 1.514678 GACACGTGGCAAATGGCTGA 61.515 55.000 18.77 0.00 44.01 4.26
8171 9399 1.210931 CACGTGGCAAATGGCTGAG 59.789 57.895 7.95 2.59 44.01 3.35
8172 9400 1.073025 ACGTGGCAAATGGCTGAGA 59.927 52.632 8.50 0.00 44.01 3.27
8173 9401 0.957395 ACGTGGCAAATGGCTGAGAG 60.957 55.000 8.50 0.00 44.01 3.20
8174 9402 1.509923 GTGGCAAATGGCTGAGAGC 59.490 57.895 8.50 0.00 44.01 4.09
8175 9403 2.042259 TGGCAAATGGCTGAGAGCG 61.042 57.895 8.50 0.00 43.62 5.03
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
20 21 1.997874 CTAGGGTGAAGGGCCTGCT 60.998 63.158 14.07 0.00 0.00 4.24
112 731 1.228552 TTGGCTGTTCAGAAGGGCC 60.229 57.895 15.81 15.81 42.73 5.80
265 884 0.501435 CGACGAAACCGTTCAGTCAC 59.499 55.000 15.15 0.00 40.80 3.67
289 908 1.159098 GGTTGGCGTTGTTCCGTGTA 61.159 55.000 0.00 0.00 0.00 2.90
356 975 3.728385 ACATGGGAAGGAAGAAGAAGG 57.272 47.619 0.00 0.00 0.00 3.46
397 1016 2.292521 TGCTGACTTAGGACTGGAGGAT 60.293 50.000 0.00 0.00 0.00 3.24
411 1030 3.818180 GGAAATCTCCATGATGCTGACT 58.182 45.455 0.00 0.00 41.96 3.41
506 1126 0.907230 AGAGCTGGAAGTGGAGGGAC 60.907 60.000 0.00 0.00 35.30 4.46
555 1175 2.585247 GCGACGGTAGGGCATGTC 60.585 66.667 0.00 0.00 0.00 3.06
693 1313 1.148048 GCTGGGGGCTGATTCTCTC 59.852 63.158 0.00 0.00 38.06 3.20
697 1317 0.106318 ATCTTGCTGGGGGCTGATTC 60.106 55.000 0.00 0.00 42.39 2.52
715 1336 0.687354 AGCTGGAGTCCACGTGAAAT 59.313 50.000 19.30 0.00 0.00 2.17
772 1394 0.935194 AAAACTAACCCACCCACCCA 59.065 50.000 0.00 0.00 0.00 4.51
773 1395 2.158490 TGTAAAACTAACCCACCCACCC 60.158 50.000 0.00 0.00 0.00 4.61
774 1396 3.226682 TGTAAAACTAACCCACCCACC 57.773 47.619 0.00 0.00 0.00 4.61
775 1397 5.794726 AATTGTAAAACTAACCCACCCAC 57.205 39.130 0.00 0.00 0.00 4.61
776 1398 6.156429 ACAAAATTGTAAAACTAACCCACCCA 59.844 34.615 0.00 0.00 40.16 4.51
777 1399 6.584488 ACAAAATTGTAAAACTAACCCACCC 58.416 36.000 0.00 0.00 40.16 4.61
778 1400 8.391859 CAAACAAAATTGTAAAACTAACCCACC 58.608 33.333 0.00 0.00 41.31 4.61
779 1401 9.152595 TCAAACAAAATTGTAAAACTAACCCAC 57.847 29.630 0.00 0.00 41.31 4.61
780 1402 9.372369 CTCAAACAAAATTGTAAAACTAACCCA 57.628 29.630 0.00 0.00 41.31 4.51
781 1403 8.332464 GCTCAAACAAAATTGTAAAACTAACCC 58.668 33.333 0.00 0.00 41.31 4.11
782 1404 8.874816 TGCTCAAACAAAATTGTAAAACTAACC 58.125 29.630 0.00 0.00 41.31 2.85
787 1409 8.574627 GCTTTTGCTCAAACAAAATTGTAAAAC 58.425 29.630 0.00 0.00 45.66 2.43
791 1413 6.112058 AGGCTTTTGCTCAAACAAAATTGTA 58.888 32.000 0.00 0.00 45.66 2.41
795 1417 5.917462 ACTAGGCTTTTGCTCAAACAAAAT 58.083 33.333 0.00 0.00 45.66 1.82
800 1422 6.270064 TGTAAAACTAGGCTTTTGCTCAAAC 58.730 36.000 0.00 0.00 46.54 2.93
803 1425 4.518970 CCTGTAAAACTAGGCTTTTGCTCA 59.481 41.667 0.00 0.00 46.54 4.26
807 1429 4.612939 GCGTCCTGTAAAACTAGGCTTTTG 60.613 45.833 0.00 0.00 34.00 2.44
845 1467 4.767255 GGCTGGACTGGGCTCGTG 62.767 72.222 0.00 0.00 0.00 4.35
895 1577 0.248843 CGCAAAGGAAGGAGAGCTCT 59.751 55.000 18.28 18.28 0.00 4.09
896 1578 0.036858 ACGCAAAGGAAGGAGAGCTC 60.037 55.000 5.27 5.27 0.00 4.09
1304 1986 0.313987 GAAAAACGAAGGGGCACTGG 59.686 55.000 0.00 0.00 0.00 4.00
1318 2001 1.539496 CGAGGACACGGACAGGAAAAA 60.539 52.381 0.00 0.00 0.00 1.94
1350 2033 2.423577 ACCAAACGTAAGATGCCTGAC 58.576 47.619 0.00 0.00 43.62 3.51
1352 2035 4.394920 ACAATACCAAACGTAAGATGCCTG 59.605 41.667 0.00 0.00 43.62 4.85
1494 2178 4.963276 TGATTAATAGCAGTGTGCCAAC 57.037 40.909 0.00 0.00 46.52 3.77
1576 2264 8.210946 GCCCCATCATAGCACATAAGTATATTA 58.789 37.037 0.00 0.00 0.00 0.98
1733 2421 6.886459 CCATCTGTCCTCTAAAATGGAAAAGA 59.114 38.462 0.00 0.00 36.58 2.52
1767 2455 1.555075 CTTCCTCGGTTTGGATGGAGA 59.445 52.381 0.00 0.00 33.09 3.71
2248 2940 2.483889 GGCAGTTAGTCTCTGGGTATGC 60.484 54.545 0.00 0.00 33.98 3.14
2374 3067 4.584327 AAAAACGGGAGATCTTTGTTGG 57.416 40.909 0.00 0.00 0.00 3.77
2454 3148 7.397892 CAGTTATCACTGGTTCTCTAGAGAA 57.602 40.000 27.71 27.71 46.10 2.87
2830 3525 1.411246 TCAATTAGGATCGACCCACCG 59.589 52.381 0.00 0.00 40.05 4.94
2863 3558 9.495572 AAAACAAATAAAGACAACAGGTTTTCA 57.504 25.926 0.00 0.00 32.36 2.69
3224 3920 9.503399 GAAGGAATCAAGGAAGTTAAGAAGTAA 57.497 33.333 0.00 0.00 0.00 2.24
3305 4001 1.154093 CACCAAAGATGCTGCTGCG 60.154 57.895 11.21 0.00 43.34 5.18
3368 4064 9.747898 ATTCCAAGTAAGTTACCAACAATGATA 57.252 29.630 9.46 0.00 0.00 2.15
3499 4488 7.272084 GCATAATTCAAGTACAGAGCACAAAAG 59.728 37.037 0.00 0.00 0.00 2.27
3893 5093 6.831769 ACATACTTCAGACTTAACGCAATTG 58.168 36.000 0.00 0.00 0.00 2.32
4238 5447 3.072622 GGTTTTTCACAGGTACTCCCTCT 59.927 47.826 0.00 0.00 43.86 3.69
4256 5465 1.880027 GCATGACTTTCTCACGGGTTT 59.120 47.619 0.00 0.00 0.00 3.27
4262 5471 1.736681 GCTCTGGCATGACTTTCTCAC 59.263 52.381 0.00 0.00 38.54 3.51
4282 5491 5.103290 ACGTTAGGCTAACAAACATGTTG 57.897 39.130 30.67 16.65 38.57 3.33
4451 5661 7.439056 AGTGAAAACATTAATTGGTTGAAGCTG 59.561 33.333 0.00 0.00 34.73 4.24
4452 5662 7.500141 AGTGAAAACATTAATTGGTTGAAGCT 58.500 30.769 0.00 0.00 34.73 3.74
4646 5856 5.833406 TCTTGCTTTGAAACAAGACATGA 57.167 34.783 14.49 0.00 45.48 3.07
4759 5969 4.937620 AGAAATTCAAGAACTCGCTGCATA 59.062 37.500 0.00 0.00 0.00 3.14
5592 6808 6.532988 AACTCTATACAACACTCTTCCTCC 57.467 41.667 0.00 0.00 0.00 4.30
5667 6883 5.312895 TGAATACACATGCAGTAGTTTGGT 58.687 37.500 0.00 0.00 0.00 3.67
5742 6958 7.310237 GCTACCCCTTGAAATATCCTTCGTATA 60.310 40.741 0.00 0.00 0.00 1.47
5747 6963 4.399219 GGCTACCCCTTGAAATATCCTTC 58.601 47.826 0.00 0.00 0.00 3.46
5843 7059 9.393512 AGATCAGAAATGTAAGAGGAATTTCAG 57.606 33.333 9.33 2.79 40.95 3.02
5899 7115 6.611613 AGACTACTCCATTGAAATCTGTGA 57.388 37.500 0.00 0.00 0.00 3.58
6017 7233 9.060347 CAACAGAGCAATACCAATATACTCATT 57.940 33.333 0.00 0.00 31.14 2.57
6093 7309 5.008514 TCGACAAAGAAATTGAGTGATTGCA 59.991 36.000 0.00 0.00 41.85 4.08
6135 7351 7.095144 TGACTATACTAGCGAGAAGAGCAATAC 60.095 40.741 0.00 0.00 37.01 1.89
6213 7429 5.986004 AAGTTAAAGTCGGTGTCTTGAAG 57.014 39.130 0.00 0.00 0.00 3.02
6302 7518 6.403866 ACAAGGACATGCAGTTAATTCAAA 57.596 33.333 0.00 0.00 0.00 2.69
6563 7779 4.124970 TCATCTCAGAAAGGAATGCATCG 58.875 43.478 0.00 0.00 0.00 3.84
6617 7833 7.925483 CACTTGAAATTTTCCCATCTTACAACA 59.075 33.333 6.68 0.00 0.00 3.33
6903 8119 3.003763 AGGCCTCCCGGAACTGTC 61.004 66.667 0.73 0.00 35.76 3.51
6961 8177 5.056480 GCAACATACTGCATACCATACTCA 58.944 41.667 0.00 0.00 42.17 3.41
7026 8242 4.445545 GGCAGCAGTAACGCGTGC 62.446 66.667 14.98 12.66 40.17 5.34
7136 8352 2.809174 TTGTGCGCCTCGATGTCG 60.809 61.111 4.18 0.00 41.45 4.35
7201 8417 8.150296 AGTGTGATCAATCAACCGAATATATCA 58.850 33.333 0.00 0.00 38.75 2.15
7267 8483 8.801882 TGAATTACTGAGGGGTAAAAAGTATG 57.198 34.615 0.00 0.00 35.66 2.39
7320 8536 4.408921 TCTGTAGGGCATTACTGTAAGCAT 59.591 41.667 17.50 11.16 37.60 3.79
7321 8537 3.772572 TCTGTAGGGCATTACTGTAAGCA 59.227 43.478 17.50 4.97 37.60 3.91
7322 8538 4.402056 TCTGTAGGGCATTACTGTAAGC 57.598 45.455 6.40 9.27 37.60 3.09
7323 8539 6.407202 ACTTTCTGTAGGGCATTACTGTAAG 58.593 40.000 6.40 15.59 36.68 2.34
7324 8540 6.014070 TGACTTTCTGTAGGGCATTACTGTAA 60.014 38.462 2.26 2.26 0.00 2.41
7325 8541 5.482526 TGACTTTCTGTAGGGCATTACTGTA 59.517 40.000 0.00 0.00 0.00 2.74
7326 8542 4.286032 TGACTTTCTGTAGGGCATTACTGT 59.714 41.667 0.00 0.00 0.00 3.55
7327 8543 4.832248 TGACTTTCTGTAGGGCATTACTG 58.168 43.478 0.00 0.00 0.00 2.74
7328 8544 4.532521 ACTGACTTTCTGTAGGGCATTACT 59.467 41.667 0.00 0.00 0.00 2.24
7329 8545 4.631813 CACTGACTTTCTGTAGGGCATTAC 59.368 45.833 0.00 0.00 0.00 1.89
7330 8546 4.323485 CCACTGACTTTCTGTAGGGCATTA 60.323 45.833 0.00 0.00 0.00 1.90
7331 8547 3.560025 CCACTGACTTTCTGTAGGGCATT 60.560 47.826 0.00 0.00 0.00 3.56
7381 8609 0.657840 GCCGTGCCACAGAACATATC 59.342 55.000 0.00 0.00 0.00 1.63
7498 8726 3.864686 CATCTGAAACGCGGCGGG 61.865 66.667 27.37 23.00 0.00 6.13
7499 8727 2.802667 CTCATCTGAAACGCGGCGG 61.803 63.158 27.37 8.34 0.00 6.13
7500 8728 2.697425 CTCATCTGAAACGCGGCG 59.303 61.111 22.36 22.36 0.00 6.46
7501 8729 1.639298 AAGCTCATCTGAAACGCGGC 61.639 55.000 12.47 0.00 0.00 6.53
7502 8730 0.095935 CAAGCTCATCTGAAACGCGG 59.904 55.000 12.47 0.00 0.00 6.46
7503 8731 1.060266 CTCAAGCTCATCTGAAACGCG 59.940 52.381 3.53 3.53 0.00 6.01
7504 8732 2.072298 ACTCAAGCTCATCTGAAACGC 58.928 47.619 0.00 0.00 0.00 4.84
7522 8750 5.510671 CATTCGTTGTTTTGAGTTGCTACT 58.489 37.500 0.00 0.00 37.31 2.57
7523 8751 4.146443 GCATTCGTTGTTTTGAGTTGCTAC 59.854 41.667 0.00 0.00 0.00 3.58
7524 8752 4.036262 AGCATTCGTTGTTTTGAGTTGCTA 59.964 37.500 0.00 0.00 35.18 3.49
7525 8753 3.115554 GCATTCGTTGTTTTGAGTTGCT 58.884 40.909 0.00 0.00 0.00 3.91
7526 8754 3.115554 AGCATTCGTTGTTTTGAGTTGC 58.884 40.909 0.00 0.00 0.00 4.17
7527 8755 6.636447 TCAATAGCATTCGTTGTTTTGAGTTG 59.364 34.615 0.00 0.00 0.00 3.16
7528 8756 6.734137 TCAATAGCATTCGTTGTTTTGAGTT 58.266 32.000 0.00 0.00 0.00 3.01
7529 8757 6.312399 TCAATAGCATTCGTTGTTTTGAGT 57.688 33.333 0.00 0.00 0.00 3.41
7530 8758 6.088085 GGTTCAATAGCATTCGTTGTTTTGAG 59.912 38.462 0.00 0.00 0.00 3.02
7531 8759 5.918011 GGTTCAATAGCATTCGTTGTTTTGA 59.082 36.000 0.00 0.00 0.00 2.69
7532 8760 5.689514 TGGTTCAATAGCATTCGTTGTTTTG 59.310 36.000 0.00 0.00 0.00 2.44
7533 8761 5.837437 TGGTTCAATAGCATTCGTTGTTTT 58.163 33.333 0.00 0.00 0.00 2.43
7534 8762 5.446143 TGGTTCAATAGCATTCGTTGTTT 57.554 34.783 0.00 0.00 0.00 2.83
7535 8763 5.415701 AGATGGTTCAATAGCATTCGTTGTT 59.584 36.000 0.00 0.00 44.68 2.83
7536 8764 4.943705 AGATGGTTCAATAGCATTCGTTGT 59.056 37.500 0.00 0.00 44.68 3.32
7537 8765 5.490139 AGATGGTTCAATAGCATTCGTTG 57.510 39.130 0.00 0.00 44.68 4.10
7538 8766 6.293626 GCATAGATGGTTCAATAGCATTCGTT 60.294 38.462 0.00 0.00 44.68 3.85
7539 8767 5.180117 GCATAGATGGTTCAATAGCATTCGT 59.820 40.000 0.00 0.00 44.68 3.85
7540 8768 5.410746 AGCATAGATGGTTCAATAGCATTCG 59.589 40.000 0.00 0.00 44.68 3.34
7541 8769 6.814506 AGCATAGATGGTTCAATAGCATTC 57.185 37.500 0.00 0.00 44.68 2.67
7563 8791 7.276658 CCAGTAAATTCCGAGCAGCTTATATAG 59.723 40.741 0.00 0.00 0.00 1.31
7564 8792 7.097192 CCAGTAAATTCCGAGCAGCTTATATA 58.903 38.462 0.00 0.00 0.00 0.86
7565 8793 5.934625 CCAGTAAATTCCGAGCAGCTTATAT 59.065 40.000 0.00 0.00 0.00 0.86
7566 8794 5.163343 ACCAGTAAATTCCGAGCAGCTTATA 60.163 40.000 0.00 0.00 0.00 0.98
7567 8795 4.130118 CCAGTAAATTCCGAGCAGCTTAT 58.870 43.478 0.00 0.00 0.00 1.73
7568 8796 3.055385 ACCAGTAAATTCCGAGCAGCTTA 60.055 43.478 0.00 0.00 0.00 3.09
7569 8797 2.290323 ACCAGTAAATTCCGAGCAGCTT 60.290 45.455 0.00 0.00 0.00 3.74
7570 8798 1.279271 ACCAGTAAATTCCGAGCAGCT 59.721 47.619 0.00 0.00 0.00 4.24
7571 8799 1.666189 GACCAGTAAATTCCGAGCAGC 59.334 52.381 0.00 0.00 0.00 5.25
7572 8800 2.972625 TGACCAGTAAATTCCGAGCAG 58.027 47.619 0.00 0.00 0.00 4.24
7573 8801 3.627395 ATGACCAGTAAATTCCGAGCA 57.373 42.857 0.00 0.00 0.00 4.26
7574 8802 4.452455 CCATATGACCAGTAAATTCCGAGC 59.548 45.833 3.65 0.00 0.00 5.03
7575 8803 4.997395 CCCATATGACCAGTAAATTCCGAG 59.003 45.833 3.65 0.00 0.00 4.63
7576 8804 4.410883 ACCCATATGACCAGTAAATTCCGA 59.589 41.667 3.65 0.00 0.00 4.55
7577 8805 4.515191 CACCCATATGACCAGTAAATTCCG 59.485 45.833 3.65 0.00 0.00 4.30
7578 8806 4.278419 GCACCCATATGACCAGTAAATTCC 59.722 45.833 3.65 0.00 0.00 3.01
7579 8807 4.887071 TGCACCCATATGACCAGTAAATTC 59.113 41.667 3.65 0.00 0.00 2.17
7580 8808 4.865905 TGCACCCATATGACCAGTAAATT 58.134 39.130 3.65 0.00 0.00 1.82
7581 8809 4.518278 TGCACCCATATGACCAGTAAAT 57.482 40.909 3.65 0.00 0.00 1.40
7582 8810 4.518278 ATGCACCCATATGACCAGTAAA 57.482 40.909 3.65 0.00 0.00 2.01
7583 8811 4.206375 CAATGCACCCATATGACCAGTAA 58.794 43.478 3.65 0.00 0.00 2.24
7584 8812 3.201930 ACAATGCACCCATATGACCAGTA 59.798 43.478 3.65 0.00 0.00 2.74
7585 8813 2.025037 ACAATGCACCCATATGACCAGT 60.025 45.455 3.65 0.00 0.00 4.00
7586 8814 2.658285 ACAATGCACCCATATGACCAG 58.342 47.619 3.65 0.00 0.00 4.00
7587 8815 2.824689 ACAATGCACCCATATGACCA 57.175 45.000 3.65 0.00 0.00 4.02
7588 8816 5.536161 AGAAATACAATGCACCCATATGACC 59.464 40.000 3.65 0.00 0.00 4.02
7589 8817 6.039717 ACAGAAATACAATGCACCCATATGAC 59.960 38.462 3.65 0.00 0.00 3.06
7590 8818 6.128486 ACAGAAATACAATGCACCCATATGA 58.872 36.000 3.65 0.00 0.00 2.15
7591 8819 6.263842 AGACAGAAATACAATGCACCCATATG 59.736 38.462 0.00 0.00 0.00 1.78
7592 8820 6.263842 CAGACAGAAATACAATGCACCCATAT 59.736 38.462 0.00 0.00 0.00 1.78
7593 8821 5.589855 CAGACAGAAATACAATGCACCCATA 59.410 40.000 0.00 0.00 0.00 2.74
7594 8822 4.400251 CAGACAGAAATACAATGCACCCAT 59.600 41.667 0.00 0.00 0.00 4.00
7595 8823 3.758023 CAGACAGAAATACAATGCACCCA 59.242 43.478 0.00 0.00 0.00 4.51
7596 8824 3.129287 CCAGACAGAAATACAATGCACCC 59.871 47.826 0.00 0.00 0.00 4.61
7597 8825 4.009675 TCCAGACAGAAATACAATGCACC 58.990 43.478 0.00 0.00 0.00 5.01
7598 8826 5.627499 TTCCAGACAGAAATACAATGCAC 57.373 39.130 0.00 0.00 0.00 4.57
7599 8827 6.839124 AATTCCAGACAGAAATACAATGCA 57.161 33.333 0.00 0.00 0.00 3.96
7600 8828 8.213518 TCTAATTCCAGACAGAAATACAATGC 57.786 34.615 0.00 0.00 0.00 3.56
7601 8829 9.388506 ACTCTAATTCCAGACAGAAATACAATG 57.611 33.333 0.00 0.00 0.00 2.82
7604 8832 9.871238 GTTACTCTAATTCCAGACAGAAATACA 57.129 33.333 0.00 0.00 0.00 2.29
7605 8833 9.871238 TGTTACTCTAATTCCAGACAGAAATAC 57.129 33.333 0.00 0.00 0.00 1.89
7606 8834 9.871238 GTGTTACTCTAATTCCAGACAGAAATA 57.129 33.333 0.00 0.00 0.00 1.40
7607 8835 8.598041 AGTGTTACTCTAATTCCAGACAGAAAT 58.402 33.333 0.00 0.00 0.00 2.17
7608 8836 7.963532 AGTGTTACTCTAATTCCAGACAGAAA 58.036 34.615 0.00 0.00 0.00 2.52
7609 8837 7.540474 AGTGTTACTCTAATTCCAGACAGAA 57.460 36.000 0.00 0.00 0.00 3.02
7610 8838 7.540474 AAGTGTTACTCTAATTCCAGACAGA 57.460 36.000 0.00 0.00 0.00 3.41
7611 8839 7.118390 CCAAAGTGTTACTCTAATTCCAGACAG 59.882 40.741 0.00 0.00 0.00 3.51
7612 8840 6.934645 CCAAAGTGTTACTCTAATTCCAGACA 59.065 38.462 0.00 0.00 0.00 3.41
7613 8841 6.935208 ACCAAAGTGTTACTCTAATTCCAGAC 59.065 38.462 0.00 0.00 0.00 3.51
7614 8842 7.074653 ACCAAAGTGTTACTCTAATTCCAGA 57.925 36.000 0.00 0.00 0.00 3.86
7615 8843 6.934645 TGACCAAAGTGTTACTCTAATTCCAG 59.065 38.462 0.00 0.00 0.00 3.86
7616 8844 6.833041 TGACCAAAGTGTTACTCTAATTCCA 58.167 36.000 0.00 0.00 0.00 3.53
7617 8845 7.923414 ATGACCAAAGTGTTACTCTAATTCC 57.077 36.000 0.00 0.00 0.00 3.01
7618 8846 9.431887 TGTATGACCAAAGTGTTACTCTAATTC 57.568 33.333 0.00 0.00 0.00 2.17
7619 8847 9.959721 ATGTATGACCAAAGTGTTACTCTAATT 57.040 29.630 0.00 0.00 0.00 1.40
7620 8848 9.383519 CATGTATGACCAAAGTGTTACTCTAAT 57.616 33.333 0.00 0.00 0.00 1.73
7621 8849 7.822334 CCATGTATGACCAAAGTGTTACTCTAA 59.178 37.037 0.00 0.00 0.00 2.10
7622 8850 7.327975 CCATGTATGACCAAAGTGTTACTCTA 58.672 38.462 0.00 0.00 0.00 2.43
7623 8851 6.173339 CCATGTATGACCAAAGTGTTACTCT 58.827 40.000 0.00 0.00 0.00 3.24
7624 8852 5.354234 CCCATGTATGACCAAAGTGTTACTC 59.646 44.000 0.00 0.00 0.00 2.59
7625 8853 5.013704 TCCCATGTATGACCAAAGTGTTACT 59.986 40.000 0.00 0.00 0.00 2.24
7626 8854 5.250200 TCCCATGTATGACCAAAGTGTTAC 58.750 41.667 0.00 0.00 0.00 2.50
7627 8855 5.506730 TCCCATGTATGACCAAAGTGTTA 57.493 39.130 0.00 0.00 0.00 2.41
7628 8856 4.380843 TCCCATGTATGACCAAAGTGTT 57.619 40.909 0.00 0.00 0.00 3.32
7629 8857 4.591321 ATCCCATGTATGACCAAAGTGT 57.409 40.909 0.00 0.00 0.00 3.55
7630 8858 5.394443 CCAAATCCCATGTATGACCAAAGTG 60.394 44.000 0.00 0.00 0.00 3.16
7631 8859 4.711355 CCAAATCCCATGTATGACCAAAGT 59.289 41.667 0.00 0.00 0.00 2.66
7632 8860 4.955450 TCCAAATCCCATGTATGACCAAAG 59.045 41.667 0.00 0.00 0.00 2.77
7633 8861 4.940483 TCCAAATCCCATGTATGACCAAA 58.060 39.130 0.00 0.00 0.00 3.28
7634 8862 4.535781 CTCCAAATCCCATGTATGACCAA 58.464 43.478 0.00 0.00 0.00 3.67
7635 8863 3.117550 CCTCCAAATCCCATGTATGACCA 60.118 47.826 0.00 0.00 0.00 4.02
7636 8864 3.117512 ACCTCCAAATCCCATGTATGACC 60.118 47.826 0.00 0.00 0.00 4.02
7637 8865 4.170468 ACCTCCAAATCCCATGTATGAC 57.830 45.455 0.00 0.00 0.00 3.06
7638 8866 4.975147 AGTACCTCCAAATCCCATGTATGA 59.025 41.667 0.00 0.00 0.00 2.15
7639 8867 5.065914 CAGTACCTCCAAATCCCATGTATG 58.934 45.833 0.00 0.00 0.00 2.39
7640 8868 4.104738 CCAGTACCTCCAAATCCCATGTAT 59.895 45.833 0.00 0.00 0.00 2.29
7641 8869 3.458118 CCAGTACCTCCAAATCCCATGTA 59.542 47.826 0.00 0.00 0.00 2.29
7642 8870 2.242196 CCAGTACCTCCAAATCCCATGT 59.758 50.000 0.00 0.00 0.00 3.21
7643 8871 2.423373 CCCAGTACCTCCAAATCCCATG 60.423 54.545 0.00 0.00 0.00 3.66
7644 8872 1.852965 CCCAGTACCTCCAAATCCCAT 59.147 52.381 0.00 0.00 0.00 4.00
7645 8873 1.203505 TCCCAGTACCTCCAAATCCCA 60.204 52.381 0.00 0.00 0.00 4.37
7646 8874 1.490910 CTCCCAGTACCTCCAAATCCC 59.509 57.143 0.00 0.00 0.00 3.85
7647 8875 2.436173 CTCTCCCAGTACCTCCAAATCC 59.564 54.545 0.00 0.00 0.00 3.01
7648 8876 2.436173 CCTCTCCCAGTACCTCCAAATC 59.564 54.545 0.00 0.00 0.00 2.17
7649 8877 2.045885 TCCTCTCCCAGTACCTCCAAAT 59.954 50.000 0.00 0.00 0.00 2.32
7650 8878 1.435563 TCCTCTCCCAGTACCTCCAAA 59.564 52.381 0.00 0.00 0.00 3.28
7651 8879 1.089978 TCCTCTCCCAGTACCTCCAA 58.910 55.000 0.00 0.00 0.00 3.53
7652 8880 0.335361 GTCCTCTCCCAGTACCTCCA 59.665 60.000 0.00 0.00 0.00 3.86
7653 8881 0.632294 AGTCCTCTCCCAGTACCTCC 59.368 60.000 0.00 0.00 0.00 4.30
7654 8882 2.535836 AAGTCCTCTCCCAGTACCTC 57.464 55.000 0.00 0.00 0.00 3.85
7655 8883 3.277416 AAAAGTCCTCTCCCAGTACCT 57.723 47.619 0.00 0.00 0.00 3.08
7752 8980 1.038681 AAACCCGTGCTCCCGTTTTT 61.039 50.000 0.00 0.00 0.00 1.94
7753 8981 1.038681 AAAACCCGTGCTCCCGTTTT 61.039 50.000 5.30 5.30 34.46 2.43
7754 8982 1.038681 AAAAACCCGTGCTCCCGTTT 61.039 50.000 0.00 0.00 0.00 3.60
7755 8983 1.454295 AAAAACCCGTGCTCCCGTT 60.454 52.632 0.00 0.00 0.00 4.44
7756 8984 2.193786 AAAAACCCGTGCTCCCGT 59.806 55.556 0.00 0.00 0.00 5.28
7770 8998 2.925724 TGACTCTTGCGGAAGGAAAAA 58.074 42.857 17.16 0.00 42.23 1.94
7771 8999 2.631160 TGACTCTTGCGGAAGGAAAA 57.369 45.000 17.16 0.00 42.23 2.29
7772 9000 2.426522 CATGACTCTTGCGGAAGGAAA 58.573 47.619 17.16 1.00 42.23 3.13
7773 9001 1.339055 CCATGACTCTTGCGGAAGGAA 60.339 52.381 17.16 0.00 39.89 3.36
7774 9002 0.250234 CCATGACTCTTGCGGAAGGA 59.750 55.000 17.16 2.93 0.00 3.36
7775 9003 0.036010 ACCATGACTCTTGCGGAAGG 60.036 55.000 17.16 9.92 0.00 3.46
7776 9004 1.813513 AACCATGACTCTTGCGGAAG 58.186 50.000 10.87 10.87 0.00 3.46
7777 9005 2.270352 AAACCATGACTCTTGCGGAA 57.730 45.000 0.00 0.00 0.00 4.30
7778 9006 1.879380 CAAAACCATGACTCTTGCGGA 59.121 47.619 0.00 0.00 0.00 5.54
7779 9007 1.666888 GCAAAACCATGACTCTTGCGG 60.667 52.381 0.00 0.00 33.74 5.69
7780 9008 1.267806 AGCAAAACCATGACTCTTGCG 59.732 47.619 12.82 0.00 45.46 4.85
7781 9009 2.352127 GGAGCAAAACCATGACTCTTGC 60.352 50.000 11.49 11.49 42.10 4.01
7782 9010 2.229784 GGGAGCAAAACCATGACTCTTG 59.770 50.000 0.00 0.00 0.00 3.02
7783 9011 2.519013 GGGAGCAAAACCATGACTCTT 58.481 47.619 0.00 0.00 0.00 2.85
7784 9012 1.611673 CGGGAGCAAAACCATGACTCT 60.612 52.381 0.00 0.00 0.00 3.24
7785 9013 0.804989 CGGGAGCAAAACCATGACTC 59.195 55.000 0.00 0.00 0.00 3.36
7786 9014 2.946947 CGGGAGCAAAACCATGACT 58.053 52.632 0.00 0.00 0.00 3.41
7802 9030 4.379243 AGTTGTGGCCTCTCGCGG 62.379 66.667 6.13 0.00 38.94 6.46
7803 9031 3.114616 CAGTTGTGGCCTCTCGCG 61.115 66.667 3.32 0.00 38.94 5.87
7804 9032 2.031163 ACAGTTGTGGCCTCTCGC 59.969 61.111 3.32 0.00 0.00 5.03
7805 9033 2.320587 GCACAGTTGTGGCCTCTCG 61.321 63.158 13.63 0.00 45.72 4.04
7806 9034 3.660621 GCACAGTTGTGGCCTCTC 58.339 61.111 13.63 0.00 45.72 3.20
7812 9040 2.320587 GCGAGAGGCACAGTTGTGG 61.321 63.158 13.63 0.00 45.72 4.17
7814 9042 2.356313 CGCGAGAGGCACAGTTGT 60.356 61.111 0.00 0.00 43.84 3.32
7815 9043 3.114616 CCGCGAGAGGCACAGTTG 61.115 66.667 8.23 0.00 43.84 3.16
7816 9044 4.379243 CCCGCGAGAGGCACAGTT 62.379 66.667 8.23 0.00 43.84 3.16
7818 9046 4.504916 CTCCCGCGAGAGGCACAG 62.505 72.222 10.16 0.00 43.84 3.66
7822 9050 4.760047 TTTGCTCCCGCGAGAGGC 62.760 66.667 19.76 11.85 38.52 4.70
7823 9051 2.815647 GTTTGCTCCCGCGAGAGG 60.816 66.667 19.76 6.66 38.52 3.69
7824 9052 2.097038 CAGTTTGCTCCCGCGAGAG 61.097 63.158 13.96 13.96 38.52 3.20
7825 9053 2.048222 CAGTTTGCTCCCGCGAGA 60.048 61.111 8.23 0.00 38.52 4.04
7826 9054 2.357517 ACAGTTTGCTCCCGCGAG 60.358 61.111 8.23 0.00 39.65 5.03
7827 9055 2.664851 CACAGTTTGCTCCCGCGA 60.665 61.111 8.23 0.00 39.65 5.87
7828 9056 2.664851 TCACAGTTTGCTCCCGCG 60.665 61.111 0.00 0.00 39.65 6.46
7829 9057 1.569479 GAGTCACAGTTTGCTCCCGC 61.569 60.000 0.00 0.00 0.00 6.13
7830 9058 0.034059 AGAGTCACAGTTTGCTCCCG 59.966 55.000 0.00 0.00 32.02 5.14
7831 9059 1.802069 GAGAGTCACAGTTTGCTCCC 58.198 55.000 0.00 0.00 32.02 4.30
7832 9060 1.423395 CGAGAGTCACAGTTTGCTCC 58.577 55.000 0.00 0.00 32.02 4.70
7833 9061 0.787183 GCGAGAGTCACAGTTTGCTC 59.213 55.000 0.00 0.00 0.00 4.26
7834 9062 0.941463 CGCGAGAGTCACAGTTTGCT 60.941 55.000 0.00 0.00 0.00 3.91
7835 9063 1.488957 CGCGAGAGTCACAGTTTGC 59.511 57.895 0.00 0.00 0.00 3.68
7836 9064 0.318699 TCCGCGAGAGTCACAGTTTG 60.319 55.000 8.23 0.00 0.00 2.93
7837 9065 0.387929 TTCCGCGAGAGTCACAGTTT 59.612 50.000 8.23 0.00 0.00 2.66
7838 9066 0.039074 CTTCCGCGAGAGTCACAGTT 60.039 55.000 8.23 0.00 0.00 3.16
7839 9067 1.581954 CTTCCGCGAGAGTCACAGT 59.418 57.895 8.23 0.00 0.00 3.55
7840 9068 1.153939 CCTTCCGCGAGAGTCACAG 60.154 63.158 8.23 0.00 0.00 3.66
7841 9069 2.636412 CCCTTCCGCGAGAGTCACA 61.636 63.158 8.23 0.00 0.00 3.58
7842 9070 1.874345 TTCCCTTCCGCGAGAGTCAC 61.874 60.000 8.23 0.00 0.00 3.67
7843 9071 1.183030 TTTCCCTTCCGCGAGAGTCA 61.183 55.000 8.23 0.00 0.00 3.41
7844 9072 0.037605 TTTTCCCTTCCGCGAGAGTC 60.038 55.000 8.23 0.00 0.00 3.36
7845 9073 0.395312 TTTTTCCCTTCCGCGAGAGT 59.605 50.000 8.23 0.00 0.00 3.24
7846 9074 3.226884 TTTTTCCCTTCCGCGAGAG 57.773 52.632 8.23 4.45 0.00 3.20
7862 9090 5.231265 AGAACGCGTTTTCTCTTCTTTTT 57.769 34.783 27.32 0.00 29.24 1.94
7863 9091 4.877323 AGAACGCGTTTTCTCTTCTTTT 57.123 36.364 27.32 0.00 29.24 2.27
7864 9092 4.877323 AAGAACGCGTTTTCTCTTCTTT 57.123 36.364 27.32 0.00 34.60 2.52
7865 9093 4.877323 AAAGAACGCGTTTTCTCTTCTT 57.123 36.364 27.32 19.16 34.60 2.52
7866 9094 4.260661 GGAAAAGAACGCGTTTTCTCTTCT 60.261 41.667 27.32 13.90 41.63 2.85
7867 9095 3.966844 GGAAAAGAACGCGTTTTCTCTTC 59.033 43.478 27.32 20.35 41.63 2.87
7868 9096 3.242969 GGGAAAAGAACGCGTTTTCTCTT 60.243 43.478 27.32 21.03 40.06 2.85
7869 9097 2.289820 GGGAAAAGAACGCGTTTTCTCT 59.710 45.455 27.32 15.91 40.06 3.10
7870 9098 2.647337 GGGAAAAGAACGCGTTTTCTC 58.353 47.619 27.32 21.11 41.63 2.87
7871 9099 1.003223 CGGGAAAAGAACGCGTTTTCT 60.003 47.619 27.32 17.13 41.63 2.52
7872 9100 1.391787 CGGGAAAAGAACGCGTTTTC 58.608 50.000 27.32 23.63 41.33 2.29
7873 9101 3.537471 CGGGAAAAGAACGCGTTTT 57.463 47.368 27.32 18.61 38.51 2.43
7877 9105 0.385098 GGAAACGGGAAAAGAACGCG 60.385 55.000 3.53 3.53 46.19 6.01
7878 9106 3.467043 GGAAACGGGAAAAGAACGC 57.533 52.632 0.00 0.00 0.00 4.84
7891 9119 0.749454 AGCCATGCCTCATCGGAAAC 60.749 55.000 0.00 0.00 33.16 2.78
7892 9120 0.749091 CAGCCATGCCTCATCGGAAA 60.749 55.000 0.00 0.00 33.16 3.13
7893 9121 1.153107 CAGCCATGCCTCATCGGAA 60.153 57.895 0.00 0.00 33.16 4.30
7894 9122 2.369633 ACAGCCATGCCTCATCGGA 61.370 57.895 0.00 0.00 33.16 4.55
7895 9123 2.184830 CACAGCCATGCCTCATCGG 61.185 63.158 0.00 0.00 0.00 4.18
7896 9124 1.153309 TCACAGCCATGCCTCATCG 60.153 57.895 0.00 0.00 0.00 3.84
7897 9125 0.107312 AGTCACAGCCATGCCTCATC 60.107 55.000 0.00 0.00 0.00 2.92
7898 9126 0.330604 AAGTCACAGCCATGCCTCAT 59.669 50.000 0.00 0.00 0.00 2.90
7899 9127 0.111061 AAAGTCACAGCCATGCCTCA 59.889 50.000 0.00 0.00 0.00 3.86
7900 9128 0.807496 GAAAGTCACAGCCATGCCTC 59.193 55.000 0.00 0.00 0.00 4.70
7901 9129 0.957395 CGAAAGTCACAGCCATGCCT 60.957 55.000 0.00 0.00 0.00 4.75
7902 9130 1.503542 CGAAAGTCACAGCCATGCC 59.496 57.895 0.00 0.00 0.00 4.40
7903 9131 1.154150 GCGAAAGTCACAGCCATGC 60.154 57.895 0.00 0.00 0.00 4.06
7904 9132 1.133253 CGCGAAAGTCACAGCCATG 59.867 57.895 0.00 0.00 0.00 3.66
7905 9133 0.602638 TTCGCGAAAGTCACAGCCAT 60.603 50.000 21.14 0.00 0.00 4.40
7906 9134 0.812014 TTTCGCGAAAGTCACAGCCA 60.812 50.000 29.22 4.19 0.00 4.75
7907 9135 0.110644 CTTTCGCGAAAGTCACAGCC 60.111 55.000 40.16 0.00 42.02 4.85
7908 9136 3.351604 CTTTCGCGAAAGTCACAGC 57.648 52.632 40.16 0.00 42.02 4.40
7909 9137 4.178322 TGTGCTTTCGCGAAAGTCACAG 62.178 50.000 44.54 32.46 46.84 3.66
7916 9144 1.010574 CGGTTGTGCTTTCGCGAAA 60.011 52.632 30.47 30.47 39.65 3.46
7917 9145 2.174969 ACGGTTGTGCTTTCGCGAA 61.175 52.632 19.38 19.38 39.65 4.70
7918 9146 2.586635 ACGGTTGTGCTTTCGCGA 60.587 55.556 3.71 3.71 39.65 5.87
7919 9147 2.425124 CACGGTTGTGCTTTCGCG 60.425 61.111 0.00 0.00 39.67 5.87
7927 9155 3.240606 CGCAAGAGGCACGGTTGTG 62.241 63.158 0.00 0.00 45.55 3.33
7928 9156 2.972505 CGCAAGAGGCACGGTTGT 60.973 61.111 0.00 0.00 45.17 3.32
7929 9157 3.726517 CCGCAAGAGGCACGGTTG 61.727 66.667 0.00 0.00 45.17 3.77
7930 9158 3.469863 TTCCGCAAGAGGCACGGTT 62.470 57.895 0.00 0.00 46.92 4.44
7931 9159 3.883744 CTTCCGCAAGAGGCACGGT 62.884 63.158 0.00 0.00 46.92 4.83
7933 9161 3.793144 GCTTCCGCAAGAGGCACG 61.793 66.667 0.00 0.00 46.54 5.34
7945 9173 0.234884 CGAGTCACGGTTTTGCTTCC 59.765 55.000 0.00 0.00 38.46 3.46
7946 9174 3.729004 CGAGTCACGGTTTTGCTTC 57.271 52.632 0.00 0.00 38.46 3.86
7957 9185 1.374758 CCTCCCTTGCACGAGTCAC 60.375 63.158 0.00 0.00 0.00 3.67
7958 9186 1.118965 TTCCTCCCTTGCACGAGTCA 61.119 55.000 0.00 0.00 0.00 3.41
7959 9187 0.034896 TTTCCTCCCTTGCACGAGTC 59.965 55.000 0.00 0.00 0.00 3.36
7960 9188 0.472471 TTTTCCTCCCTTGCACGAGT 59.528 50.000 0.00 0.00 0.00 4.18
7961 9189 1.604604 TTTTTCCTCCCTTGCACGAG 58.395 50.000 0.00 0.00 0.00 4.18
7962 9190 3.811031 TTTTTCCTCCCTTGCACGA 57.189 47.368 0.00 0.00 0.00 4.35
7982 9210 1.843753 CGCAAAAGAACGCGTTTTCTT 59.156 42.857 27.32 22.15 45.84 2.52
7983 9211 1.462791 CGCAAAAGAACGCGTTTTCT 58.537 45.000 27.32 17.13 46.23 2.52
7984 9212 3.949582 CGCAAAAGAACGCGTTTTC 57.050 47.368 27.32 14.82 46.23 2.29
8020 9248 7.926018 GGTCTTCCTTAGCTTTTTGATCAAAAA 59.074 33.333 33.26 33.26 44.98 1.94
8021 9249 7.433680 GGTCTTCCTTAGCTTTTTGATCAAAA 58.566 34.615 26.01 26.01 38.40 2.44
8022 9250 6.293955 CGGTCTTCCTTAGCTTTTTGATCAAA 60.294 38.462 16.91 16.91 0.00 2.69
8023 9251 5.181245 CGGTCTTCCTTAGCTTTTTGATCAA 59.819 40.000 3.38 3.38 0.00 2.57
8024 9252 4.695455 CGGTCTTCCTTAGCTTTTTGATCA 59.305 41.667 0.00 0.00 0.00 2.92
8025 9253 4.095036 CCGGTCTTCCTTAGCTTTTTGATC 59.905 45.833 0.00 0.00 0.00 2.92
8026 9254 4.010349 CCGGTCTTCCTTAGCTTTTTGAT 58.990 43.478 0.00 0.00 0.00 2.57
8027 9255 3.181448 ACCGGTCTTCCTTAGCTTTTTGA 60.181 43.478 0.00 0.00 0.00 2.69
8028 9256 3.058224 CACCGGTCTTCCTTAGCTTTTTG 60.058 47.826 2.59 0.00 0.00 2.44
8029 9257 3.146847 CACCGGTCTTCCTTAGCTTTTT 58.853 45.455 2.59 0.00 0.00 1.94
8030 9258 2.552373 CCACCGGTCTTCCTTAGCTTTT 60.552 50.000 2.59 0.00 0.00 2.27
8031 9259 1.003233 CCACCGGTCTTCCTTAGCTTT 59.997 52.381 2.59 0.00 0.00 3.51
8032 9260 0.613777 CCACCGGTCTTCCTTAGCTT 59.386 55.000 2.59 0.00 0.00 3.74
8033 9261 0.252103 TCCACCGGTCTTCCTTAGCT 60.252 55.000 2.59 0.00 0.00 3.32
8034 9262 0.611714 TTCCACCGGTCTTCCTTAGC 59.388 55.000 2.59 0.00 0.00 3.09
8035 9263 3.072211 GTTTTCCACCGGTCTTCCTTAG 58.928 50.000 2.59 0.00 0.00 2.18
8036 9264 2.224597 GGTTTTCCACCGGTCTTCCTTA 60.225 50.000 2.59 0.00 40.31 2.69
8037 9265 1.478105 GGTTTTCCACCGGTCTTCCTT 60.478 52.381 2.59 0.00 40.31 3.36
8038 9266 0.109913 GGTTTTCCACCGGTCTTCCT 59.890 55.000 2.59 0.00 40.31 3.36
8039 9267 2.637521 GGTTTTCCACCGGTCTTCC 58.362 57.895 2.59 0.00 40.31 3.46
8092 9320 2.548875 TGCATGCGTTTTCAGCTTTTT 58.451 38.095 14.09 0.00 35.28 1.94
8093 9321 2.222007 TGCATGCGTTTTCAGCTTTT 57.778 40.000 14.09 0.00 35.28 2.27
8094 9322 2.222007 TTGCATGCGTTTTCAGCTTT 57.778 40.000 14.09 0.00 35.28 3.51
8095 9323 2.222007 TTTGCATGCGTTTTCAGCTT 57.778 40.000 14.09 0.00 35.28 3.74
8096 9324 2.222007 TTTTGCATGCGTTTTCAGCT 57.778 40.000 14.09 0.00 35.28 4.24
8147 9375 4.383602 ATTTGCCACGTGTCGCGC 62.384 61.111 15.65 11.15 46.11 6.86
8149 9377 2.126888 CCATTTGCCACGTGTCGC 60.127 61.111 15.65 12.30 0.00 5.19
8150 9378 2.126888 GCCATTTGCCACGTGTCG 60.127 61.111 15.65 0.51 0.00 4.35
8151 9379 1.081242 CAGCCATTTGCCACGTGTC 60.081 57.895 15.65 0.98 42.71 3.67
8152 9380 1.518056 CTCAGCCATTTGCCACGTGT 61.518 55.000 15.65 0.00 42.71 4.49
8153 9381 1.210931 CTCAGCCATTTGCCACGTG 59.789 57.895 9.08 9.08 42.71 4.49
8154 9382 0.957395 CTCTCAGCCATTTGCCACGT 60.957 55.000 0.00 0.00 42.71 4.49
8155 9383 1.798735 CTCTCAGCCATTTGCCACG 59.201 57.895 0.00 0.00 42.71 4.94
8156 9384 1.509923 GCTCTCAGCCATTTGCCAC 59.490 57.895 0.00 0.00 42.71 5.01
8157 9385 2.042259 CGCTCTCAGCCATTTGCCA 61.042 57.895 0.00 0.00 42.71 4.92
8158 9386 2.796651 CGCTCTCAGCCATTTGCC 59.203 61.111 0.00 0.00 42.71 4.52


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.