Multiple sequence alignment - TraesCS2B01G288100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G288100 chr2B 100.000 4119 0 0 1 4119 397603491 397607609 0.000000e+00 7607.0
1 TraesCS2B01G288100 chr2B 81.242 789 103 27 1830 2580 697769205 697769986 2.740000e-166 595.0
2 TraesCS2B01G288100 chr2B 91.554 296 12 6 260 542 10376979 10377274 2.980000e-106 396.0
3 TraesCS2B01G288100 chr2B 90.572 297 14 6 260 542 400560449 400560153 8.360000e-102 381.0
4 TraesCS2B01G288100 chr2B 90.541 296 15 7 260 542 320660978 320660683 3.010000e-101 379.0
5 TraesCS2B01G288100 chr2B 87.143 140 11 5 3489 3622 772372347 772372485 7.130000e-33 152.0
6 TraesCS2B01G288100 chr2B 92.683 82 5 1 2480 2561 708797664 708797584 2.600000e-22 117.0
7 TraesCS2B01G288100 chr2A 92.990 1184 35 14 562 1737 434984269 434985412 0.000000e+00 1683.0
8 TraesCS2B01G288100 chr2A 95.464 926 31 5 2572 3493 434985422 434986340 0.000000e+00 1467.0
9 TraesCS2B01G288100 chr2A 84.025 482 42 14 3668 4119 434986339 434986815 8.180000e-117 431.0
10 TraesCS2B01G288100 chr2A 92.727 55 4 0 3623 3677 717292497 717292443 3.410000e-11 80.5
11 TraesCS2B01G288100 chr2D 92.289 1206 36 18 539 1724 328468456 328469624 0.000000e+00 1659.0
12 TraesCS2B01G288100 chr2D 95.811 931 24 5 2579 3494 328469775 328470705 0.000000e+00 1489.0
13 TraesCS2B01G288100 chr2D 90.610 213 14 4 3667 3879 328470706 328470912 1.130000e-70 278.0
14 TraesCS2B01G288100 chr2D 98.667 150 2 0 1612 1761 328469626 328469775 2.440000e-67 267.0
15 TraesCS2B01G288100 chr2D 86.585 246 19 9 25 261 328468219 328468459 4.080000e-65 259.0
16 TraesCS2B01G288100 chr2D 88.722 133 13 2 3492 3622 476917814 476917682 1.180000e-35 161.0
17 TraesCS2B01G288100 chr2D 83.425 181 16 6 3492 3671 621263983 621264150 5.510000e-34 156.0
18 TraesCS2B01G288100 chr2D 91.837 98 8 0 2486 2583 82905350 82905253 2.000000e-28 137.0
19 TraesCS2B01G288100 chr2D 79.558 181 24 5 3492 3672 446934355 446934188 2.600000e-22 117.0
20 TraesCS2B01G288100 chr2D 100.000 40 0 0 3631 3670 433717049 433717088 1.590000e-09 75.0
21 TraesCS2B01G288100 chr7D 82.730 857 100 29 1761 2580 113796203 113795358 0.000000e+00 719.0
22 TraesCS2B01G288100 chr3D 82.624 869 93 30 1760 2579 507775484 507776343 0.000000e+00 715.0
23 TraesCS2B01G288100 chr3D 82.503 863 105 26 1757 2580 553397735 553398590 0.000000e+00 715.0
24 TraesCS2B01G288100 chr3D 87.151 179 10 6 3492 3670 478643947 478644112 1.510000e-44 191.0
25 TraesCS2B01G288100 chr4B 82.346 861 105 25 1761 2582 667421027 667421879 0.000000e+00 704.0
26 TraesCS2B01G288100 chr4B 82.082 759 99 21 1761 2491 612203089 612202340 7.570000e-172 614.0
27 TraesCS2B01G288100 chr4B 91.582 297 12 6 259 542 400361521 400361225 8.300000e-107 398.0
28 TraesCS2B01G288100 chr4B 91.696 289 10 7 261 536 17081938 17082225 4.990000e-104 388.0
29 TraesCS2B01G288100 chr4B 91.176 102 8 1 2480 2580 623224268 623224369 2.000000e-28 137.0
30 TraesCS2B01G288100 chr4B 81.111 180 21 5 3492 3671 583756917 583756751 9.290000e-27 132.0
31 TraesCS2B01G288100 chr5B 81.100 873 107 25 1761 2580 51864499 51865366 0.000000e+00 645.0
32 TraesCS2B01G288100 chr5B 82.296 723 94 30 1787 2488 123023356 123024065 2.740000e-166 595.0
33 TraesCS2B01G288100 chr5B 82.353 714 99 22 1787 2481 123220749 123221454 2.740000e-166 595.0
34 TraesCS2B01G288100 chr1D 82.330 764 98 27 1751 2488 233337843 233338595 2.700000e-176 628.0
35 TraesCS2B01G288100 chr5A 83.183 666 95 14 1835 2491 504565026 504564369 9.860000e-166 593.0
36 TraesCS2B01G288100 chr5A 79.885 174 22 6 3496 3669 689384741 689384581 9.360000e-22 115.0
37 TraesCS2B01G288100 chr7B 80.060 667 88 22 1944 2580 70825632 70826283 1.750000e-123 453.0
38 TraesCS2B01G288100 chr7B 91.126 293 12 7 263 542 386091407 386091116 6.460000e-103 385.0
39 TraesCS2B01G288100 chr1B 91.096 292 13 6 258 536 126782388 126782679 2.320000e-102 383.0
40 TraesCS2B01G288100 chr3A 91.065 291 11 7 260 536 688694435 688694724 3.010000e-101 379.0
41 TraesCS2B01G288100 chr6A 88.112 286 27 5 260 542 593692465 593692746 2.370000e-87 333.0
42 TraesCS2B01G288100 chr6A 88.785 107 7 5 2478 2580 470072064 470072169 4.320000e-25 126.0
43 TraesCS2B01G288100 chr6D 85.955 178 12 6 3492 3669 8921591 8921427 1.180000e-40 178.0
44 TraesCS2B01G288100 chr6D 83.696 184 17 6 3487 3670 27494482 27494652 1.180000e-35 161.0
45 TraesCS2B01G288100 chr6D 88.722 133 13 2 3492 3622 366999260 366999128 1.180000e-35 161.0
46 TraesCS2B01G288100 chr5D 87.591 137 12 3 3491 3622 268936087 268936223 1.980000e-33 154.0
47 TraesCS2B01G288100 chr1A 87.143 140 13 1 3488 3622 295312713 295312852 1.980000e-33 154.0
48 TraesCS2B01G288100 chr1A 95.918 49 2 0 3623 3671 491646509 491646461 3.410000e-11 80.5
49 TraesCS2B01G288100 chr6B 82.143 196 18 11 3492 3684 651577189 651577008 7.130000e-33 152.0
50 TraesCS2B01G288100 chr4D 87.050 139 13 2 3489 3622 3371084 3370946 7.130000e-33 152.0
51 TraesCS2B01G288100 chr3B 81.081 185 19 10 3492 3676 661538504 661538336 2.580000e-27 134.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G288100 chr2B 397603491 397607609 4118 False 7607.000000 7607 100.000000 1 4119 1 chr2B.!!$F2 4118
1 TraesCS2B01G288100 chr2B 697769205 697769986 781 False 595.000000 595 81.242000 1830 2580 1 chr2B.!!$F3 750
2 TraesCS2B01G288100 chr2A 434984269 434986815 2546 False 1193.666667 1683 90.826333 562 4119 3 chr2A.!!$F1 3557
3 TraesCS2B01G288100 chr2D 328468219 328470912 2693 False 790.400000 1659 92.792400 25 3879 5 chr2D.!!$F3 3854
4 TraesCS2B01G288100 chr7D 113795358 113796203 845 True 719.000000 719 82.730000 1761 2580 1 chr7D.!!$R1 819
5 TraesCS2B01G288100 chr3D 507775484 507776343 859 False 715.000000 715 82.624000 1760 2579 1 chr3D.!!$F2 819
6 TraesCS2B01G288100 chr3D 553397735 553398590 855 False 715.000000 715 82.503000 1757 2580 1 chr3D.!!$F3 823
7 TraesCS2B01G288100 chr4B 667421027 667421879 852 False 704.000000 704 82.346000 1761 2582 1 chr4B.!!$F3 821
8 TraesCS2B01G288100 chr4B 612202340 612203089 749 True 614.000000 614 82.082000 1761 2491 1 chr4B.!!$R3 730
9 TraesCS2B01G288100 chr5B 51864499 51865366 867 False 645.000000 645 81.100000 1761 2580 1 chr5B.!!$F1 819
10 TraesCS2B01G288100 chr5B 123023356 123024065 709 False 595.000000 595 82.296000 1787 2488 1 chr5B.!!$F2 701
11 TraesCS2B01G288100 chr5B 123220749 123221454 705 False 595.000000 595 82.353000 1787 2481 1 chr5B.!!$F3 694
12 TraesCS2B01G288100 chr1D 233337843 233338595 752 False 628.000000 628 82.330000 1751 2488 1 chr1D.!!$F1 737
13 TraesCS2B01G288100 chr5A 504564369 504565026 657 True 593.000000 593 83.183000 1835 2491 1 chr5A.!!$R1 656
14 TraesCS2B01G288100 chr7B 70825632 70826283 651 False 453.000000 453 80.060000 1944 2580 1 chr7B.!!$F1 636

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
273 287 0.107508 TACAGTACTCCCTCCGTCGG 60.108 60.0 4.39 4.39 0.0 4.79 F
337 351 0.185175 AGGCCTCGTTTTGGAAAGGT 59.815 50.0 0.00 0.00 0.0 3.50 F
2010 2205 0.035820 TTAGTCCGGTGGCCATTGTC 60.036 55.0 9.72 0.00 0.0 3.18 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1785 1940 0.103390 TCACAAGTGAAGAACGGCGA 59.897 50.0 16.62 0.0 36.53 5.54 R
2089 2284 1.257750 TAAGCTGAGCGGGCAAGAGA 61.258 55.0 0.00 0.0 0.00 3.10 R
3144 3426 0.249073 CCGTCATCGAGTAGCCAAGG 60.249 60.0 0.00 0.0 39.71 3.61 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
39 40 3.067180 GCCATGATTTCCACGAATGACAT 59.933 43.478 0.00 0.00 0.00 3.06
41 42 5.276270 CCATGATTTCCACGAATGACATTC 58.724 41.667 16.80 16.80 35.94 2.67
42 43 5.066893 CCATGATTTCCACGAATGACATTCT 59.933 40.000 22.54 9.67 37.13 2.40
46 47 2.076100 TCCACGAATGACATTCTGTGC 58.924 47.619 28.51 9.48 39.80 4.57
60 61 5.235616 ACATTCTGTGCTGAAATTTTGCAAG 59.764 36.000 17.39 15.93 38.50 4.01
89 90 9.553064 TGCAAAATATTTGTCAAAGTTTACCAT 57.447 25.926 0.39 0.00 0.00 3.55
170 184 2.156098 GCAAATACTCCACGTCCCAAA 58.844 47.619 0.00 0.00 0.00 3.28
264 278 9.612620 CTTCAAAATTGAATTGTACAGTACTCC 57.387 33.333 12.07 0.00 45.26 3.85
265 279 8.106247 TCAAAATTGAATTGTACAGTACTCCC 57.894 34.615 12.07 0.25 33.55 4.30
266 280 7.942341 TCAAAATTGAATTGTACAGTACTCCCT 59.058 33.333 12.07 0.00 33.55 4.20
267 281 7.923414 AAATTGAATTGTACAGTACTCCCTC 57.077 36.000 12.07 4.48 0.00 4.30
268 282 5.416271 TTGAATTGTACAGTACTCCCTCC 57.584 43.478 12.07 0.00 0.00 4.30
269 283 3.446161 TGAATTGTACAGTACTCCCTCCG 59.554 47.826 12.07 0.00 0.00 4.63
270 284 2.592102 TTGTACAGTACTCCCTCCGT 57.408 50.000 12.07 0.00 0.00 4.69
271 285 2.119801 TGTACAGTACTCCCTCCGTC 57.880 55.000 12.07 0.00 0.00 4.79
272 286 1.012841 GTACAGTACTCCCTCCGTCG 58.987 60.000 3.19 0.00 0.00 5.12
273 287 0.107508 TACAGTACTCCCTCCGTCGG 60.108 60.000 4.39 4.39 0.00 4.79
274 288 2.119655 CAGTACTCCCTCCGTCGGG 61.120 68.421 12.29 1.87 46.13 5.14
275 289 2.832201 GTACTCCCTCCGTCGGGG 60.832 72.222 12.29 8.10 44.78 5.73
276 290 3.341629 TACTCCCTCCGTCGGGGT 61.342 66.667 10.99 5.37 44.78 4.95
277 291 2.922704 TACTCCCTCCGTCGGGGTT 61.923 63.158 10.99 0.16 44.78 4.11
278 292 2.445492 TACTCCCTCCGTCGGGGTTT 62.445 60.000 10.99 0.00 44.78 3.27
279 293 1.683365 CTCCCTCCGTCGGGGTTTA 60.683 63.158 10.99 0.00 44.78 2.01
280 294 1.002017 TCCCTCCGTCGGGGTTTAT 59.998 57.895 10.99 0.00 44.78 1.40
281 295 0.618393 TCCCTCCGTCGGGGTTTATT 60.618 55.000 10.99 0.00 44.78 1.40
282 296 1.122227 CCCTCCGTCGGGGTTTATTA 58.878 55.000 10.99 0.00 40.75 0.98
283 297 1.069668 CCCTCCGTCGGGGTTTATTAG 59.930 57.143 10.99 0.00 40.75 1.73
284 298 1.069668 CCTCCGTCGGGGTTTATTAGG 59.930 57.143 10.99 3.60 37.00 2.69
285 299 0.465287 TCCGTCGGGGTTTATTAGGC 59.535 55.000 12.29 0.00 37.00 3.93
286 300 0.533531 CCGTCGGGGTTTATTAGGCC 60.534 60.000 2.34 0.00 0.00 5.19
287 301 0.466963 CGTCGGGGTTTATTAGGCCT 59.533 55.000 11.78 11.78 0.00 5.19
288 302 1.539712 CGTCGGGGTTTATTAGGCCTC 60.540 57.143 9.68 0.00 0.00 4.70
289 303 1.767088 GTCGGGGTTTATTAGGCCTCT 59.233 52.381 9.68 0.00 0.00 3.69
290 304 2.044758 TCGGGGTTTATTAGGCCTCTC 58.955 52.381 9.68 0.00 0.00 3.20
291 305 1.766496 CGGGGTTTATTAGGCCTCTCA 59.234 52.381 9.68 0.00 0.00 3.27
292 306 2.224305 CGGGGTTTATTAGGCCTCTCAG 60.224 54.545 9.68 0.00 0.00 3.35
293 307 2.487445 GGGGTTTATTAGGCCTCTCAGC 60.487 54.545 9.68 0.00 0.00 4.26
294 308 2.172717 GGGTTTATTAGGCCTCTCAGCA 59.827 50.000 9.68 0.00 0.00 4.41
295 309 3.181439 GGGTTTATTAGGCCTCTCAGCAT 60.181 47.826 9.68 0.00 0.00 3.79
296 310 4.068599 GGTTTATTAGGCCTCTCAGCATC 58.931 47.826 9.68 0.00 0.00 3.91
297 311 4.444876 GGTTTATTAGGCCTCTCAGCATCA 60.445 45.833 9.68 0.00 0.00 3.07
298 312 2.926778 ATTAGGCCTCTCAGCATCAC 57.073 50.000 9.68 0.00 0.00 3.06
299 313 1.571955 TTAGGCCTCTCAGCATCACA 58.428 50.000 9.68 0.00 0.00 3.58
300 314 1.571955 TAGGCCTCTCAGCATCACAA 58.428 50.000 9.68 0.00 0.00 3.33
301 315 0.252479 AGGCCTCTCAGCATCACAAG 59.748 55.000 0.00 0.00 0.00 3.16
302 316 1.375098 GGCCTCTCAGCATCACAAGC 61.375 60.000 0.00 0.00 0.00 4.01
303 317 0.675837 GCCTCTCAGCATCACAAGCA 60.676 55.000 0.00 0.00 0.00 3.91
304 318 2.017623 GCCTCTCAGCATCACAAGCAT 61.018 52.381 0.00 0.00 0.00 3.79
305 319 1.671328 CCTCTCAGCATCACAAGCATG 59.329 52.381 0.00 0.00 0.00 4.06
306 320 2.357075 CTCTCAGCATCACAAGCATGT 58.643 47.619 0.00 0.00 41.61 3.21
307 321 2.352034 CTCTCAGCATCACAAGCATGTC 59.648 50.000 0.00 0.00 37.82 3.06
308 322 1.400846 CTCAGCATCACAAGCATGTCC 59.599 52.381 0.00 0.00 37.82 4.02
309 323 0.454600 CAGCATCACAAGCATGTCCC 59.545 55.000 0.00 0.00 37.82 4.46
310 324 0.330604 AGCATCACAAGCATGTCCCT 59.669 50.000 0.00 0.00 37.82 4.20
311 325 1.180029 GCATCACAAGCATGTCCCTT 58.820 50.000 0.00 0.00 37.82 3.95
312 326 1.547372 GCATCACAAGCATGTCCCTTT 59.453 47.619 0.00 0.00 37.82 3.11
313 327 2.028748 GCATCACAAGCATGTCCCTTTT 60.029 45.455 0.00 0.00 37.82 2.27
314 328 3.555586 GCATCACAAGCATGTCCCTTTTT 60.556 43.478 0.00 0.00 37.82 1.94
315 329 4.321899 GCATCACAAGCATGTCCCTTTTTA 60.322 41.667 0.00 0.00 37.82 1.52
316 330 5.625197 GCATCACAAGCATGTCCCTTTTTAT 60.625 40.000 0.00 0.00 37.82 1.40
317 331 6.405731 GCATCACAAGCATGTCCCTTTTTATA 60.406 38.462 0.00 0.00 37.82 0.98
318 332 7.546358 CATCACAAGCATGTCCCTTTTTATAA 58.454 34.615 0.00 0.00 37.82 0.98
319 333 7.156876 TCACAAGCATGTCCCTTTTTATAAG 57.843 36.000 0.00 0.00 37.82 1.73
320 334 6.152661 TCACAAGCATGTCCCTTTTTATAAGG 59.847 38.462 0.00 0.00 37.82 2.69
321 335 5.105351 ACAAGCATGTCCCTTTTTATAAGGC 60.105 40.000 0.00 0.00 33.41 4.35
322 336 3.960755 AGCATGTCCCTTTTTATAAGGCC 59.039 43.478 0.00 0.00 36.10 5.19
323 337 3.960755 GCATGTCCCTTTTTATAAGGCCT 59.039 43.478 0.00 0.00 36.10 5.19
324 338 4.038042 GCATGTCCCTTTTTATAAGGCCTC 59.962 45.833 5.23 0.00 36.10 4.70
325 339 3.881220 TGTCCCTTTTTATAAGGCCTCG 58.119 45.455 5.23 0.00 36.10 4.63
326 340 3.264964 TGTCCCTTTTTATAAGGCCTCGT 59.735 43.478 5.23 0.00 36.10 4.18
327 341 4.263594 TGTCCCTTTTTATAAGGCCTCGTT 60.264 41.667 5.23 0.00 36.10 3.85
328 342 4.703575 GTCCCTTTTTATAAGGCCTCGTTT 59.296 41.667 5.23 0.00 36.10 3.60
329 343 5.184479 GTCCCTTTTTATAAGGCCTCGTTTT 59.816 40.000 5.23 0.00 36.10 2.43
330 344 5.184287 TCCCTTTTTATAAGGCCTCGTTTTG 59.816 40.000 5.23 0.00 36.10 2.44
331 345 5.407502 CCTTTTTATAAGGCCTCGTTTTGG 58.592 41.667 5.23 0.00 0.00 3.28
332 346 5.184287 CCTTTTTATAAGGCCTCGTTTTGGA 59.816 40.000 5.23 0.00 0.00 3.53
333 347 6.294843 CCTTTTTATAAGGCCTCGTTTTGGAA 60.295 38.462 5.23 0.00 0.00 3.53
334 348 6.651975 TTTTATAAGGCCTCGTTTTGGAAA 57.348 33.333 5.23 0.00 0.00 3.13
335 349 5.890424 TTATAAGGCCTCGTTTTGGAAAG 57.110 39.130 5.23 0.00 0.00 2.62
336 350 1.328279 AAGGCCTCGTTTTGGAAAGG 58.672 50.000 5.23 0.00 0.00 3.11
337 351 0.185175 AGGCCTCGTTTTGGAAAGGT 59.815 50.000 0.00 0.00 0.00 3.50
338 352 0.313987 GGCCTCGTTTTGGAAAGGTG 59.686 55.000 0.00 0.00 0.00 4.00
339 353 0.318699 GCCTCGTTTTGGAAAGGTGC 60.319 55.000 0.00 0.00 0.00 5.01
340 354 1.028905 CCTCGTTTTGGAAAGGTGCA 58.971 50.000 0.00 0.00 0.00 4.57
341 355 1.613437 CCTCGTTTTGGAAAGGTGCAT 59.387 47.619 0.00 0.00 0.00 3.96
342 356 2.607771 CCTCGTTTTGGAAAGGTGCATG 60.608 50.000 0.00 0.00 0.00 4.06
343 357 1.139163 CGTTTTGGAAAGGTGCATGC 58.861 50.000 11.82 11.82 0.00 4.06
344 358 1.537776 CGTTTTGGAAAGGTGCATGCA 60.538 47.619 18.46 18.46 0.00 3.96
345 359 2.769893 GTTTTGGAAAGGTGCATGCAT 58.230 42.857 25.64 7.59 0.00 3.96
346 360 2.459060 TTTGGAAAGGTGCATGCATG 57.541 45.000 25.64 22.70 0.00 4.06
360 374 4.271590 CATGCATGCAACCATTTCATTG 57.728 40.909 26.68 10.40 0.00 2.82
361 375 2.701107 TGCATGCAACCATTTCATTGG 58.299 42.857 20.30 0.00 42.82 3.16
372 386 5.943706 CCATTTCATTGGTTGCATTGAAA 57.056 34.783 0.00 0.00 40.99 2.69
373 387 5.933790 CCATTTCATTGGTTGCATTGAAAG 58.066 37.500 1.50 0.00 40.32 2.62
374 388 5.470777 CCATTTCATTGGTTGCATTGAAAGT 59.529 36.000 1.50 0.00 40.32 2.66
375 389 6.347888 CCATTTCATTGGTTGCATTGAAAGTC 60.348 38.462 1.50 0.00 40.32 3.01
376 390 4.933505 TCATTGGTTGCATTGAAAGTCA 57.066 36.364 0.00 0.00 0.00 3.41
377 391 5.471556 TCATTGGTTGCATTGAAAGTCAT 57.528 34.783 0.00 0.00 0.00 3.06
378 392 5.856156 TCATTGGTTGCATTGAAAGTCATT 58.144 33.333 0.00 0.00 0.00 2.57
379 393 5.697178 TCATTGGTTGCATTGAAAGTCATTG 59.303 36.000 0.00 0.00 32.57 2.82
380 394 4.669206 TGGTTGCATTGAAAGTCATTGT 57.331 36.364 0.00 0.00 32.17 2.71
381 395 5.021033 TGGTTGCATTGAAAGTCATTGTT 57.979 34.783 0.00 0.00 32.17 2.83
382 396 4.809958 TGGTTGCATTGAAAGTCATTGTTG 59.190 37.500 0.00 0.00 32.17 3.33
383 397 4.810491 GGTTGCATTGAAAGTCATTGTTGT 59.190 37.500 0.00 0.00 32.17 3.32
384 398 5.294060 GGTTGCATTGAAAGTCATTGTTGTT 59.706 36.000 0.00 0.00 32.17 2.83
385 399 5.970140 TGCATTGAAAGTCATTGTTGTTG 57.030 34.783 0.00 0.00 32.17 3.33
386 400 4.809958 TGCATTGAAAGTCATTGTTGTTGG 59.190 37.500 0.00 0.00 32.17 3.77
387 401 4.810491 GCATTGAAAGTCATTGTTGTTGGT 59.190 37.500 0.00 0.00 32.17 3.67
388 402 5.276963 GCATTGAAAGTCATTGTTGTTGGTG 60.277 40.000 0.00 0.00 32.17 4.17
389 403 3.779759 TGAAAGTCATTGTTGTTGGTGC 58.220 40.909 0.00 0.00 0.00 5.01
390 404 2.888834 AAGTCATTGTTGTTGGTGCC 57.111 45.000 0.00 0.00 0.00 5.01
391 405 1.774110 AGTCATTGTTGTTGGTGCCA 58.226 45.000 0.00 0.00 0.00 4.92
392 406 2.318908 AGTCATTGTTGTTGGTGCCAT 58.681 42.857 0.00 0.00 0.00 4.40
393 407 2.036217 AGTCATTGTTGTTGGTGCCATG 59.964 45.455 0.00 0.00 0.00 3.66
394 408 2.035704 GTCATTGTTGTTGGTGCCATGA 59.964 45.455 0.00 0.00 0.00 3.07
395 409 2.035704 TCATTGTTGTTGGTGCCATGAC 59.964 45.455 0.00 0.00 0.00 3.06
396 410 1.774110 TTGTTGTTGGTGCCATGACT 58.226 45.000 0.00 0.00 0.00 3.41
397 411 1.031235 TGTTGTTGGTGCCATGACTG 58.969 50.000 0.00 0.00 0.00 3.51
398 412 0.314935 GTTGTTGGTGCCATGACTGG 59.685 55.000 0.00 0.00 46.17 4.00
399 413 0.827089 TTGTTGGTGCCATGACTGGG 60.827 55.000 0.00 0.00 43.36 4.45
400 414 1.074775 GTTGGTGCCATGACTGGGA 59.925 57.895 0.00 0.00 43.36 4.37
401 415 0.539438 GTTGGTGCCATGACTGGGAA 60.539 55.000 0.00 0.00 45.45 3.97
402 416 0.187117 TTGGTGCCATGACTGGGAAA 59.813 50.000 0.00 0.00 45.45 3.13
403 417 0.409092 TGGTGCCATGACTGGGAAAT 59.591 50.000 0.00 0.00 45.45 2.17
404 418 1.203162 TGGTGCCATGACTGGGAAATT 60.203 47.619 0.00 0.00 45.45 1.82
405 419 2.042297 TGGTGCCATGACTGGGAAATTA 59.958 45.455 0.00 0.00 45.45 1.40
406 420 3.096092 GGTGCCATGACTGGGAAATTAA 58.904 45.455 0.00 0.00 45.45 1.40
407 421 3.706086 GGTGCCATGACTGGGAAATTAAT 59.294 43.478 0.00 0.00 45.45 1.40
408 422 4.892934 GGTGCCATGACTGGGAAATTAATA 59.107 41.667 0.00 0.00 45.45 0.98
409 423 5.221244 GGTGCCATGACTGGGAAATTAATAC 60.221 44.000 0.00 0.00 45.45 1.89
410 424 5.359576 GTGCCATGACTGGGAAATTAATACA 59.640 40.000 0.00 0.00 45.45 2.29
411 425 5.359576 TGCCATGACTGGGAAATTAATACAC 59.640 40.000 0.00 0.00 40.37 2.90
412 426 5.594317 GCCATGACTGGGAAATTAATACACT 59.406 40.000 0.00 0.00 43.36 3.55
413 427 6.096846 GCCATGACTGGGAAATTAATACACTT 59.903 38.462 0.00 0.00 43.36 3.16
414 428 7.682021 GCCATGACTGGGAAATTAATACACTTC 60.682 40.741 0.00 0.00 43.36 3.01
415 429 7.339212 CCATGACTGGGAAATTAATACACTTCA 59.661 37.037 0.00 0.00 39.04 3.02
416 430 8.906867 CATGACTGGGAAATTAATACACTTCAT 58.093 33.333 0.00 0.00 0.00 2.57
417 431 8.279970 TGACTGGGAAATTAATACACTTCATG 57.720 34.615 0.00 0.00 0.00 3.07
418 432 7.100458 ACTGGGAAATTAATACACTTCATGC 57.900 36.000 0.00 0.00 0.00 4.06
419 433 6.130298 TGGGAAATTAATACACTTCATGCG 57.870 37.500 0.00 0.00 0.00 4.73
420 434 5.650266 TGGGAAATTAATACACTTCATGCGT 59.350 36.000 0.00 0.00 0.00 5.24
421 435 5.971202 GGGAAATTAATACACTTCATGCGTG 59.029 40.000 11.82 11.82 38.32 5.34
422 436 6.404293 GGGAAATTAATACACTTCATGCGTGT 60.404 38.462 19.70 19.70 46.45 4.49
423 437 7.027161 GGAAATTAATACACTTCATGCGTGTT 58.973 34.615 20.59 10.24 42.56 3.32
424 438 7.540745 GGAAATTAATACACTTCATGCGTGTTT 59.459 33.333 20.59 16.61 42.56 2.83
425 439 8.810652 AAATTAATACACTTCATGCGTGTTTT 57.189 26.923 20.59 19.84 42.56 2.43
426 440 8.810652 AATTAATACACTTCATGCGTGTTTTT 57.189 26.923 20.59 16.96 42.56 1.94
445 459 3.945981 TTTGATTGACTGCATGCATGT 57.054 38.095 26.79 20.37 0.00 3.21
446 460 2.931512 TGATTGACTGCATGCATGTG 57.068 45.000 26.79 21.02 0.00 3.21
447 461 2.438411 TGATTGACTGCATGCATGTGA 58.562 42.857 26.79 12.73 0.00 3.58
448 462 2.422127 TGATTGACTGCATGCATGTGAG 59.578 45.455 26.79 23.04 0.00 3.51
449 463 2.188062 TTGACTGCATGCATGTGAGA 57.812 45.000 26.79 8.79 0.00 3.27
450 464 1.734163 TGACTGCATGCATGTGAGAG 58.266 50.000 26.79 18.64 0.00 3.20
451 465 1.276989 TGACTGCATGCATGTGAGAGA 59.723 47.619 26.79 12.20 0.00 3.10
452 466 1.934525 GACTGCATGCATGTGAGAGAG 59.065 52.381 26.79 8.59 0.00 3.20
453 467 1.278413 ACTGCATGCATGTGAGAGAGT 59.722 47.619 26.79 9.30 0.00 3.24
454 468 1.666189 CTGCATGCATGTGAGAGAGTG 59.334 52.381 26.79 0.21 0.00 3.51
455 469 0.377554 GCATGCATGTGAGAGAGTGC 59.622 55.000 26.79 7.20 38.05 4.40
458 472 2.484742 TGCATGTGAGAGAGTGCATT 57.515 45.000 0.00 0.00 42.13 3.56
459 473 2.081462 TGCATGTGAGAGAGTGCATTG 58.919 47.619 0.00 0.00 42.13 2.82
460 474 1.400846 GCATGTGAGAGAGTGCATTGG 59.599 52.381 0.00 0.00 37.52 3.16
461 475 2.014857 CATGTGAGAGAGTGCATTGGG 58.985 52.381 0.00 0.00 0.00 4.12
462 476 1.351076 TGTGAGAGAGTGCATTGGGA 58.649 50.000 0.00 0.00 0.00 4.37
463 477 1.277273 TGTGAGAGAGTGCATTGGGAG 59.723 52.381 0.00 0.00 0.00 4.30
464 478 1.277557 GTGAGAGAGTGCATTGGGAGT 59.722 52.381 0.00 0.00 0.00 3.85
465 479 1.277273 TGAGAGAGTGCATTGGGAGTG 59.723 52.381 0.00 0.00 0.00 3.51
466 480 1.552337 GAGAGAGTGCATTGGGAGTGA 59.448 52.381 0.00 0.00 0.00 3.41
467 481 1.980765 AGAGAGTGCATTGGGAGTGAA 59.019 47.619 0.00 0.00 0.00 3.18
468 482 2.373169 AGAGAGTGCATTGGGAGTGAAA 59.627 45.455 0.00 0.00 0.00 2.69
469 483 3.009916 AGAGAGTGCATTGGGAGTGAAAT 59.990 43.478 0.00 0.00 0.00 2.17
470 484 3.087031 AGAGTGCATTGGGAGTGAAATG 58.913 45.455 0.00 0.00 36.95 2.32
471 485 2.165030 GAGTGCATTGGGAGTGAAATGG 59.835 50.000 0.00 0.00 34.90 3.16
472 486 2.170166 GTGCATTGGGAGTGAAATGGA 58.830 47.619 0.00 0.00 34.90 3.41
473 487 2.562298 GTGCATTGGGAGTGAAATGGAA 59.438 45.455 0.00 0.00 36.13 3.53
474 488 2.827322 TGCATTGGGAGTGAAATGGAAG 59.173 45.455 0.00 0.00 34.90 3.46
475 489 3.091545 GCATTGGGAGTGAAATGGAAGA 58.908 45.455 0.00 0.00 34.90 2.87
476 490 3.129988 GCATTGGGAGTGAAATGGAAGAG 59.870 47.826 0.00 0.00 34.90 2.85
477 491 4.338879 CATTGGGAGTGAAATGGAAGAGT 58.661 43.478 0.00 0.00 31.46 3.24
478 492 4.453480 TTGGGAGTGAAATGGAAGAGTT 57.547 40.909 0.00 0.00 0.00 3.01
479 493 5.576563 TTGGGAGTGAAATGGAAGAGTTA 57.423 39.130 0.00 0.00 0.00 2.24
480 494 5.576563 TGGGAGTGAAATGGAAGAGTTAA 57.423 39.130 0.00 0.00 0.00 2.01
481 495 5.313712 TGGGAGTGAAATGGAAGAGTTAAC 58.686 41.667 0.00 0.00 0.00 2.01
482 496 5.073144 TGGGAGTGAAATGGAAGAGTTAACT 59.927 40.000 8.13 8.13 0.00 2.24
483 497 6.271391 TGGGAGTGAAATGGAAGAGTTAACTA 59.729 38.462 8.42 0.00 0.00 2.24
484 498 7.037586 TGGGAGTGAAATGGAAGAGTTAACTAT 60.038 37.037 8.42 1.58 0.00 2.12
485 499 8.483758 GGGAGTGAAATGGAAGAGTTAACTATA 58.516 37.037 8.42 0.00 0.00 1.31
494 508 9.975218 ATGGAAGAGTTAACTATATGTTTTGGT 57.025 29.630 8.42 0.00 39.89 3.67
495 509 9.802039 TGGAAGAGTTAACTATATGTTTTGGTT 57.198 29.630 8.42 0.00 39.89 3.67
510 524 7.696992 TGTTTTGGTTTAAGAGAAGTTGTCT 57.303 32.000 0.00 0.00 40.25 3.41
511 525 8.117813 TGTTTTGGTTTAAGAGAAGTTGTCTT 57.882 30.769 18.27 18.27 36.41 3.01
512 526 8.581578 TGTTTTGGTTTAAGAGAAGTTGTCTTT 58.418 29.630 19.27 5.49 36.41 2.52
516 530 7.927048 TGGTTTAAGAGAAGTTGTCTTTAAGC 58.073 34.615 24.96 24.96 39.63 3.09
517 531 7.012989 TGGTTTAAGAGAAGTTGTCTTTAAGCC 59.987 37.037 26.92 22.67 38.97 4.35
518 532 7.228906 GGTTTAAGAGAAGTTGTCTTTAAGCCT 59.771 37.037 22.87 3.73 37.31 4.58
519 533 9.269453 GTTTAAGAGAAGTTGTCTTTAAGCCTA 57.731 33.333 19.27 0.00 36.41 3.93
520 534 9.841295 TTTAAGAGAAGTTGTCTTTAAGCCTAA 57.159 29.630 19.27 4.51 36.41 2.69
526 540 9.011095 AGAAGTTGTCTTTAAGCCTAATAAACC 57.989 33.333 0.00 0.00 29.66 3.27
527 541 7.698506 AGTTGTCTTTAAGCCTAATAAACCC 57.301 36.000 0.00 0.00 0.00 4.11
528 542 6.373495 AGTTGTCTTTAAGCCTAATAAACCCG 59.627 38.462 0.00 0.00 0.00 5.28
529 543 6.052405 TGTCTTTAAGCCTAATAAACCCGA 57.948 37.500 0.00 0.00 0.00 5.14
530 544 6.474630 TGTCTTTAAGCCTAATAAACCCGAA 58.525 36.000 0.00 0.00 0.00 4.30
531 545 6.372381 TGTCTTTAAGCCTAATAAACCCGAAC 59.628 38.462 0.00 0.00 0.00 3.95
532 546 5.581874 TCTTTAAGCCTAATAAACCCGAACG 59.418 40.000 0.00 0.00 0.00 3.95
533 547 2.320745 AGCCTAATAAACCCGAACGG 57.679 50.000 6.25 6.25 37.81 4.44
534 548 1.832998 AGCCTAATAAACCCGAACGGA 59.167 47.619 15.07 0.00 37.50 4.69
535 549 2.159000 AGCCTAATAAACCCGAACGGAG 60.159 50.000 15.07 7.41 37.50 4.63
536 550 2.159057 GCCTAATAAACCCGAACGGAGA 60.159 50.000 15.07 0.00 37.50 3.71
537 551 3.714391 CCTAATAAACCCGAACGGAGAG 58.286 50.000 15.07 0.74 37.50 3.20
538 552 3.382546 CCTAATAAACCCGAACGGAGAGA 59.617 47.826 15.07 0.00 37.50 3.10
539 553 3.521947 AATAAACCCGAACGGAGAGAG 57.478 47.619 15.07 0.00 37.50 3.20
540 554 1.915141 TAAACCCGAACGGAGAGAGT 58.085 50.000 15.07 0.64 37.50 3.24
541 555 1.915141 AAACCCGAACGGAGAGAGTA 58.085 50.000 15.07 0.00 37.50 2.59
542 556 2.140839 AACCCGAACGGAGAGAGTAT 57.859 50.000 15.07 0.00 37.50 2.12
543 557 1.390565 ACCCGAACGGAGAGAGTATG 58.609 55.000 15.07 0.00 37.50 2.39
544 558 1.064906 ACCCGAACGGAGAGAGTATGA 60.065 52.381 15.07 0.00 37.50 2.15
545 559 2.231529 CCCGAACGGAGAGAGTATGAT 58.768 52.381 15.07 0.00 37.50 2.45
546 560 3.181447 ACCCGAACGGAGAGAGTATGATA 60.181 47.826 15.07 0.00 37.50 2.15
547 561 3.437395 CCCGAACGGAGAGAGTATGATAG 59.563 52.174 15.07 0.00 37.50 2.08
556 570 6.485313 CGGAGAGAGTATGATAGATATGGGTC 59.515 46.154 0.00 0.00 0.00 4.46
585 599 8.185505 TGTCACAAATTTGGAGTAGTACAAAAC 58.814 33.333 21.74 5.47 39.69 2.43
586 600 7.646526 GTCACAAATTTGGAGTAGTACAAAACC 59.353 37.037 21.74 1.54 39.69 3.27
615 629 1.896660 GAACACCCCATGCGTGTGT 60.897 57.895 15.18 11.17 43.56 3.72
646 660 3.426117 ATAAGAGTGCCGGTCGCGG 62.426 63.158 6.13 0.00 42.08 6.46
689 703 2.048503 GCGAGCGTACACCAAGGT 60.049 61.111 0.00 0.00 0.00 3.50
694 708 1.134560 GAGCGTACACCAAGGTAGAGG 59.865 57.143 0.00 0.00 0.00 3.69
698 712 2.817665 GTACACCAAGGTAGAGGGAGT 58.182 52.381 0.00 0.00 0.00 3.85
699 713 3.623203 CGTACACCAAGGTAGAGGGAGTA 60.623 52.174 0.00 0.00 0.00 2.59
739 757 4.374702 CAACACGCAGCTGCCGAC 62.375 66.667 32.07 6.03 37.91 4.79
888 917 1.001248 TCGTCCCGATCCCCTTTCT 59.999 57.895 0.00 0.00 0.00 2.52
909 938 0.460722 TCAAGCAAGCAAGCAAGCAA 59.539 45.000 10.52 0.00 36.85 3.91
910 939 0.859232 CAAGCAAGCAAGCAAGCAAG 59.141 50.000 10.52 0.00 36.85 4.01
911 940 0.878961 AAGCAAGCAAGCAAGCAAGC 60.879 50.000 10.52 6.16 36.99 4.01
912 941 1.593209 GCAAGCAAGCAAGCAAGCA 60.593 52.632 10.52 0.00 36.81 3.91
948 977 0.612453 ACCGGGAGTGAGAGGAAGTC 60.612 60.000 6.32 0.00 0.00 3.01
1467 1496 3.499563 CCTGGATCGTCTTCCTCCTAGAT 60.500 52.174 0.00 0.00 36.68 1.98
1509 1538 2.564947 CTCCTCTGCCTTCACAACTACT 59.435 50.000 0.00 0.00 0.00 2.57
1510 1539 2.300152 TCCTCTGCCTTCACAACTACTG 59.700 50.000 0.00 0.00 0.00 2.74
1511 1540 2.037772 CCTCTGCCTTCACAACTACTGT 59.962 50.000 0.00 0.00 39.56 3.55
1512 1541 3.258372 CCTCTGCCTTCACAACTACTGTA 59.742 47.826 0.00 0.00 36.10 2.74
1513 1542 4.238514 CTCTGCCTTCACAACTACTGTAC 58.761 47.826 0.00 0.00 36.10 2.90
1514 1543 3.895656 TCTGCCTTCACAACTACTGTACT 59.104 43.478 0.00 0.00 36.10 2.73
1812 1970 6.725246 CCGTTCTTCACTTGTGAAATTAACT 58.275 36.000 15.70 0.00 0.00 2.24
1961 2154 7.436673 AGAGATGAGTTATTTGATGCGTAGTTC 59.563 37.037 0.00 0.00 0.00 3.01
1962 2155 7.041721 AGATGAGTTATTTGATGCGTAGTTCA 58.958 34.615 0.00 0.00 0.00 3.18
1986 2180 2.818130 TCTTTGCACATTTTGGCCTC 57.182 45.000 3.32 0.00 0.00 4.70
2003 2198 2.433664 CGGTGTTAGTCCGGTGGC 60.434 66.667 0.00 0.00 43.68 5.01
2004 2199 2.046604 GGTGTTAGTCCGGTGGCC 60.047 66.667 0.00 0.00 0.00 5.36
2010 2205 0.035820 TTAGTCCGGTGGCCATTGTC 60.036 55.000 9.72 0.00 0.00 3.18
2028 2223 1.349357 GTCTGAGCCTCTTGGGAGTTT 59.651 52.381 0.00 0.00 37.86 2.66
2054 2249 2.639065 TCACGCTAAACCCATGGAATC 58.361 47.619 15.22 0.00 0.00 2.52
2068 2263 1.000052 TGGAATCGTTACTGTGACGCA 60.000 47.619 18.77 9.18 40.16 5.24
2089 2284 5.065914 GCACATATGGGTCAGTACATGAAT 58.934 41.667 6.86 0.00 40.43 2.57
2097 2292 3.873952 GGTCAGTACATGAATCTCTTGCC 59.126 47.826 0.00 0.00 40.43 4.52
2108 2303 1.219124 CTCTTGCCCGCTCAGCTTA 59.781 57.895 0.00 0.00 0.00 3.09
2160 2356 4.546829 TTTCCGTTAAGTCCACTGCTAT 57.453 40.909 0.00 0.00 0.00 2.97
2165 2361 4.106197 CGTTAAGTCCACTGCTATCTCAC 58.894 47.826 0.00 0.00 0.00 3.51
2368 2570 6.055231 TCACAAACTTTAAATGACCGTGAG 57.945 37.500 0.00 0.00 0.00 3.51
2527 2797 1.623542 GGCCCTAGTGACCCGACAAT 61.624 60.000 0.00 0.00 0.00 2.71
2544 2814 2.026822 ACAATCCTCGAAGCACCAGAAT 60.027 45.455 0.00 0.00 0.00 2.40
2564 2834 2.440409 TGCTTCAATTTGAGGGAGCTC 58.560 47.619 17.84 4.71 0.00 4.09
2633 2910 8.982723 AGATAGTTGGAGTGAGTGTTTATACAT 58.017 33.333 0.00 0.00 36.50 2.29
2642 2919 8.994429 AGTGAGTGTTTATACATCAGAGAAAG 57.006 34.615 0.00 0.00 36.50 2.62
2688 2965 4.712337 TGTTTGCCCCGGACATAATTTTAT 59.288 37.500 0.73 0.00 0.00 1.40
2722 2999 3.370103 GGTATCGATTTGTCCACCCTCAA 60.370 47.826 1.71 0.00 0.00 3.02
2754 3031 0.671251 CGACCACCAGATCCTAGCTC 59.329 60.000 0.00 0.00 0.00 4.09
2809 3091 5.743636 AACAGTTGGCCATTTATTCATGT 57.256 34.783 6.09 0.00 0.00 3.21
3144 3426 1.227793 GGATCCCTAGCTGCTGTGC 60.228 63.158 13.43 0.00 0.00 4.57
3287 3572 5.048434 GTGCATCTGCCTCTCTTTTTACTTT 60.048 40.000 0.00 0.00 41.18 2.66
3391 3676 3.723097 TTCCGTTGCAGGCACCCAA 62.723 57.895 0.00 0.00 0.00 4.12
3421 3706 7.222161 TCTATGTAACTACGATGAGCTTCCTA 58.778 38.462 0.00 0.00 0.00 2.94
3480 3765 8.667076 AAGCAAAGCAAAATCAATACTCTTTT 57.333 26.923 0.00 0.00 0.00 2.27
3494 3779 9.268268 TCAATACTCTTTTCGTTCACAAATACT 57.732 29.630 0.00 0.00 0.00 2.12
3495 3780 9.530129 CAATACTCTTTTCGTTCACAAATACTC 57.470 33.333 0.00 0.00 0.00 2.59
3496 3781 6.541111 ACTCTTTTCGTTCACAAATACTCC 57.459 37.500 0.00 0.00 0.00 3.85
3497 3782 5.469084 ACTCTTTTCGTTCACAAATACTCCC 59.531 40.000 0.00 0.00 0.00 4.30
3498 3783 5.617252 TCTTTTCGTTCACAAATACTCCCT 58.383 37.500 0.00 0.00 0.00 4.20
3499 3784 5.699458 TCTTTTCGTTCACAAATACTCCCTC 59.301 40.000 0.00 0.00 0.00 4.30
3500 3785 3.604875 TCGTTCACAAATACTCCCTCC 57.395 47.619 0.00 0.00 0.00 4.30
3501 3786 2.094390 TCGTTCACAAATACTCCCTCCG 60.094 50.000 0.00 0.00 0.00 4.63
3502 3787 2.353406 CGTTCACAAATACTCCCTCCGT 60.353 50.000 0.00 0.00 0.00 4.69
3503 3788 3.671716 GTTCACAAATACTCCCTCCGTT 58.328 45.455 0.00 0.00 0.00 4.44
3504 3789 3.604875 TCACAAATACTCCCTCCGTTC 57.395 47.619 0.00 0.00 0.00 3.95
3505 3790 3.170717 TCACAAATACTCCCTCCGTTCT 58.829 45.455 0.00 0.00 0.00 3.01
3506 3791 3.581332 TCACAAATACTCCCTCCGTTCTT 59.419 43.478 0.00 0.00 0.00 2.52
3507 3792 4.773674 TCACAAATACTCCCTCCGTTCTTA 59.226 41.667 0.00 0.00 0.00 2.10
3508 3793 5.246656 TCACAAATACTCCCTCCGTTCTTAA 59.753 40.000 0.00 0.00 0.00 1.85
3509 3794 5.935789 CACAAATACTCCCTCCGTTCTTAAA 59.064 40.000 0.00 0.00 0.00 1.52
3510 3795 6.598064 CACAAATACTCCCTCCGTTCTTAAAT 59.402 38.462 0.00 0.00 0.00 1.40
3511 3796 7.767198 CACAAATACTCCCTCCGTTCTTAAATA 59.233 37.037 0.00 0.00 0.00 1.40
3512 3797 8.491958 ACAAATACTCCCTCCGTTCTTAAATAT 58.508 33.333 0.00 0.00 0.00 1.28
3513 3798 9.991906 CAAATACTCCCTCCGTTCTTAAATATA 57.008 33.333 0.00 0.00 0.00 0.86
3516 3801 7.672122 ACTCCCTCCGTTCTTAAATATAAGT 57.328 36.000 0.00 0.00 39.65 2.24
3517 3802 8.773033 ACTCCCTCCGTTCTTAAATATAAGTA 57.227 34.615 0.00 0.00 39.65 2.24
3518 3803 9.377238 ACTCCCTCCGTTCTTAAATATAAGTAT 57.623 33.333 0.00 0.00 39.65 2.12
3545 3830 9.567776 TTTTAGAGATTCCAACAAATGACTACA 57.432 29.630 0.00 0.00 0.00 2.74
3546 3831 9.739276 TTTAGAGATTCCAACAAATGACTACAT 57.261 29.630 0.00 0.00 38.50 2.29
3548 3833 8.723942 AGAGATTCCAACAAATGACTACATAC 57.276 34.615 0.00 0.00 35.50 2.39
3549 3834 7.492669 AGAGATTCCAACAAATGACTACATACG 59.507 37.037 0.00 0.00 35.50 3.06
3550 3835 7.327975 AGATTCCAACAAATGACTACATACGA 58.672 34.615 0.00 0.00 35.50 3.43
3551 3836 7.822334 AGATTCCAACAAATGACTACATACGAA 59.178 33.333 0.00 0.00 35.50 3.85
3552 3837 7.731882 TTCCAACAAATGACTACATACGAAA 57.268 32.000 0.00 0.00 35.50 3.46
3553 3838 7.915293 TCCAACAAATGACTACATACGAAAT 57.085 32.000 0.00 0.00 35.50 2.17
3554 3839 9.438228 TTCCAACAAATGACTACATACGAAATA 57.562 29.630 0.00 0.00 35.50 1.40
3555 3840 9.438228 TCCAACAAATGACTACATACGAAATAA 57.562 29.630 0.00 0.00 35.50 1.40
3564 3849 9.863845 TGACTACATACGAAATAAAATGAGTGA 57.136 29.630 0.00 0.00 0.00 3.41
3573 3858 9.838339 ACGAAATAAAATGAGTGAATCTATCCT 57.162 29.630 0.00 0.00 0.00 3.24
3663 3948 8.959705 AAAGAACTTATATTTAGGAACGGAGG 57.040 34.615 0.00 0.00 0.00 4.30
3664 3949 7.063934 AGAACTTATATTTAGGAACGGAGGG 57.936 40.000 0.00 0.00 0.00 4.30
3665 3950 6.842807 AGAACTTATATTTAGGAACGGAGGGA 59.157 38.462 0.00 0.00 0.00 4.20
3670 3955 4.957684 ATTTAGGAACGGAGGGAGTATG 57.042 45.455 0.00 0.00 0.00 2.39
3733 4018 8.450578 TGTTCACTCAACTCATTTTAGTTCAT 57.549 30.769 0.00 0.00 37.61 2.57
3734 4019 9.554395 TGTTCACTCAACTCATTTTAGTTCATA 57.446 29.630 0.00 0.00 37.61 2.15
3771 4056 7.587037 ATCCAGAACATCTTCTTTGTCAAAA 57.413 32.000 0.00 0.00 34.20 2.44
3783 4068 5.996644 TCTTTGTCAAAAGAGGGAGTGTTA 58.003 37.500 0.00 0.00 45.44 2.41
3794 4079 7.745620 AAGAGGGAGTGTTACACAAAATAAG 57.254 36.000 18.19 0.00 36.74 1.73
3822 4107 7.094933 ACGGAACTGAGCGTATAAAATCTTTTT 60.095 33.333 0.00 0.00 0.00 1.94
3852 4137 0.833287 ATACGCCAGATGACAAGGCT 59.167 50.000 13.08 0.00 46.14 4.58
3857 4142 0.957395 CCAGATGACAAGGCTGCGTT 60.957 55.000 1.08 1.08 0.00 4.84
3881 4166 4.944048 AGGAGTTAAATGCACAAAACCAC 58.056 39.130 0.00 0.00 0.00 4.16
3887 4172 3.625649 AATGCACAAAACCACCACTTT 57.374 38.095 0.00 0.00 0.00 2.66
3889 4174 3.512033 TGCACAAAACCACCACTTTAC 57.488 42.857 0.00 0.00 0.00 2.01
3895 4206 3.678915 AAACCACCACTTTACGTTTCG 57.321 42.857 0.00 0.00 0.00 3.46
3907 4218 6.032042 CACTTTACGTTTCGTGATATTTTGCC 59.968 38.462 0.00 0.00 41.39 4.52
3923 4234 2.246719 TGCCCCGAACCAAAAATTTG 57.753 45.000 0.00 0.00 37.90 2.32
3930 4241 5.053145 CCCGAACCAAAAATTTGACAATGA 58.947 37.500 7.44 0.00 40.55 2.57
3932 4243 5.521735 CCGAACCAAAAATTTGACAATGACA 59.478 36.000 7.44 0.00 40.55 3.58
3953 4264 0.182775 AAAACACCGAGCCCTTGTCT 59.817 50.000 0.00 0.00 0.00 3.41
3961 4272 0.915364 GAGCCCTTGTCTGATCCCTT 59.085 55.000 0.00 0.00 0.00 3.95
3970 4281 0.614697 TCTGATCCCTTGCTGTCCGA 60.615 55.000 0.00 0.00 0.00 4.55
3974 4285 0.321653 ATCCCTTGCTGTCCGACAAC 60.322 55.000 2.19 0.00 0.00 3.32
3975 4286 2.317609 CCCTTGCTGTCCGACAACG 61.318 63.158 2.19 0.00 39.43 4.10
4012 4323 0.603569 ACGACTCTGTCCAAAGCGAT 59.396 50.000 0.00 0.00 0.00 4.58
4063 4374 0.689412 CTCACTCCCCTCCCTTCCTC 60.689 65.000 0.00 0.00 0.00 3.71
4064 4375 1.156322 TCACTCCCCTCCCTTCCTCT 61.156 60.000 0.00 0.00 0.00 3.69
4085 4396 2.126882 CTCCCTCTCCTCTCTCTCTCA 58.873 57.143 0.00 0.00 0.00 3.27
4094 4410 1.039785 TCTCTCTCTCACGGGCATGG 61.040 60.000 0.00 0.00 0.00 3.66
4096 4412 4.147449 TCTCTCACGGGCATGGCG 62.147 66.667 13.76 11.05 0.00 5.69
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
12 13 4.327982 TTCGTGGAAATCATGGCAAAAA 57.672 36.364 0.00 0.00 33.31 1.94
13 14 4.021632 TCATTCGTGGAAATCATGGCAAAA 60.022 37.500 0.00 0.00 33.31 2.44
14 15 3.509184 TCATTCGTGGAAATCATGGCAAA 59.491 39.130 0.00 0.00 33.31 3.68
15 16 3.087781 TCATTCGTGGAAATCATGGCAA 58.912 40.909 0.00 0.00 33.31 4.52
16 17 2.423185 GTCATTCGTGGAAATCATGGCA 59.577 45.455 0.00 0.00 33.31 4.92
17 18 2.423185 TGTCATTCGTGGAAATCATGGC 59.577 45.455 0.00 0.00 33.31 4.40
18 19 4.906065 ATGTCATTCGTGGAAATCATGG 57.094 40.909 0.00 0.00 33.31 3.66
19 20 5.969435 CAGAATGTCATTCGTGGAAATCATG 59.031 40.000 17.81 5.16 43.92 3.07
20 21 6.127810 CAGAATGTCATTCGTGGAAATCAT 57.872 37.500 17.81 0.00 43.92 2.45
21 22 5.550232 CAGAATGTCATTCGTGGAAATCA 57.450 39.130 17.81 0.00 43.92 2.57
39 40 3.556775 GCTTGCAAAATTTCAGCACAGAA 59.443 39.130 15.38 3.57 38.11 3.02
41 42 2.867368 TGCTTGCAAAATTTCAGCACAG 59.133 40.909 15.38 15.36 38.11 3.66
42 43 2.902523 TGCTTGCAAAATTTCAGCACA 58.097 38.095 15.38 10.00 38.11 4.57
60 61 9.316859 GTAAACTTTGACAAATATTTTGCATGC 57.683 29.630 11.82 11.82 0.00 4.06
123 137 4.142752 CGAGCTCAAATGCTTTCTGATGAA 60.143 41.667 15.40 0.00 44.17 2.57
245 259 5.395324 CGGAGGGAGTACTGTACAATTCAAT 60.395 44.000 19.27 0.00 0.00 2.57
264 278 1.069668 CCTAATAAACCCCGACGGAGG 59.930 57.143 17.49 17.18 34.64 4.30
265 279 1.539712 GCCTAATAAACCCCGACGGAG 60.540 57.143 17.49 4.05 34.64 4.63
266 280 0.465287 GCCTAATAAACCCCGACGGA 59.535 55.000 17.49 0.00 34.64 4.69
267 281 0.533531 GGCCTAATAAACCCCGACGG 60.534 60.000 6.99 6.99 37.81 4.79
268 282 0.466963 AGGCCTAATAAACCCCGACG 59.533 55.000 1.29 0.00 0.00 5.12
269 283 1.767088 AGAGGCCTAATAAACCCCGAC 59.233 52.381 4.42 0.00 0.00 4.79
270 284 2.044758 GAGAGGCCTAATAAACCCCGA 58.955 52.381 4.42 0.00 0.00 5.14
271 285 1.766496 TGAGAGGCCTAATAAACCCCG 59.234 52.381 4.42 0.00 0.00 5.73
272 286 2.487445 GCTGAGAGGCCTAATAAACCCC 60.487 54.545 4.42 0.00 0.00 4.95
273 287 2.172717 TGCTGAGAGGCCTAATAAACCC 59.827 50.000 4.42 0.00 0.00 4.11
274 288 3.560636 TGCTGAGAGGCCTAATAAACC 57.439 47.619 4.42 0.00 0.00 3.27
275 289 4.513318 GTGATGCTGAGAGGCCTAATAAAC 59.487 45.833 4.42 0.00 0.00 2.01
276 290 4.164030 TGTGATGCTGAGAGGCCTAATAAA 59.836 41.667 4.42 0.00 0.00 1.40
277 291 3.711190 TGTGATGCTGAGAGGCCTAATAA 59.289 43.478 4.42 0.00 0.00 1.40
278 292 3.308401 TGTGATGCTGAGAGGCCTAATA 58.692 45.455 4.42 0.00 0.00 0.98
279 293 2.121948 TGTGATGCTGAGAGGCCTAAT 58.878 47.619 4.42 0.00 0.00 1.73
280 294 1.571955 TGTGATGCTGAGAGGCCTAA 58.428 50.000 4.42 0.00 0.00 2.69
281 295 1.483827 CTTGTGATGCTGAGAGGCCTA 59.516 52.381 4.42 0.00 0.00 3.93
282 296 0.252479 CTTGTGATGCTGAGAGGCCT 59.748 55.000 3.86 3.86 0.00 5.19
283 297 1.375098 GCTTGTGATGCTGAGAGGCC 61.375 60.000 0.00 0.00 0.00 5.19
284 298 0.675837 TGCTTGTGATGCTGAGAGGC 60.676 55.000 0.00 0.00 0.00 4.70
285 299 1.671328 CATGCTTGTGATGCTGAGAGG 59.329 52.381 0.00 0.00 0.00 3.69
286 300 2.352034 GACATGCTTGTGATGCTGAGAG 59.648 50.000 10.37 0.00 35.79 3.20
287 301 2.353323 GACATGCTTGTGATGCTGAGA 58.647 47.619 10.37 0.00 35.79 3.27
288 302 1.400846 GGACATGCTTGTGATGCTGAG 59.599 52.381 10.37 0.00 35.79 3.35
289 303 1.456296 GGACATGCTTGTGATGCTGA 58.544 50.000 10.37 0.00 35.79 4.26
290 304 0.454600 GGGACATGCTTGTGATGCTG 59.545 55.000 10.37 0.00 35.79 4.41
291 305 0.330604 AGGGACATGCTTGTGATGCT 59.669 50.000 10.37 0.00 35.79 3.79
292 306 1.180029 AAGGGACATGCTTGTGATGC 58.820 50.000 10.37 0.00 35.79 3.91
293 307 3.947910 AAAAGGGACATGCTTGTGATG 57.052 42.857 10.37 0.00 35.79 3.07
294 308 7.147846 CCTTATAAAAAGGGACATGCTTGTGAT 60.148 37.037 10.37 0.00 35.79 3.06
295 309 6.152661 CCTTATAAAAAGGGACATGCTTGTGA 59.847 38.462 10.37 0.00 35.79 3.58
296 310 6.332630 CCTTATAAAAAGGGACATGCTTGTG 58.667 40.000 10.37 0.00 35.79 3.33
297 311 5.105351 GCCTTATAAAAAGGGACATGCTTGT 60.105 40.000 4.68 4.68 37.88 3.16
298 312 5.351458 GCCTTATAAAAAGGGACATGCTTG 58.649 41.667 5.96 0.00 37.88 4.01
299 313 4.405680 GGCCTTATAAAAAGGGACATGCTT 59.594 41.667 0.00 0.00 37.88 3.91
300 314 3.960755 GGCCTTATAAAAAGGGACATGCT 59.039 43.478 0.00 0.00 37.88 3.79
301 315 3.960755 AGGCCTTATAAAAAGGGACATGC 59.039 43.478 0.00 0.00 37.88 4.06
302 316 4.275936 CGAGGCCTTATAAAAAGGGACATG 59.724 45.833 6.77 0.00 37.88 3.21
303 317 4.079958 ACGAGGCCTTATAAAAAGGGACAT 60.080 41.667 6.77 0.00 37.88 3.06
304 318 3.264964 ACGAGGCCTTATAAAAAGGGACA 59.735 43.478 6.77 0.00 37.88 4.02
305 319 3.882444 ACGAGGCCTTATAAAAAGGGAC 58.118 45.455 6.77 0.00 37.88 4.46
306 320 4.579647 AACGAGGCCTTATAAAAAGGGA 57.420 40.909 6.77 0.00 37.88 4.20
307 321 5.407502 CAAAACGAGGCCTTATAAAAAGGG 58.592 41.667 6.77 0.00 37.88 3.95
308 322 5.184287 TCCAAAACGAGGCCTTATAAAAAGG 59.816 40.000 6.77 3.07 40.39 3.11
309 323 6.262193 TCCAAAACGAGGCCTTATAAAAAG 57.738 37.500 6.77 0.00 0.00 2.27
310 324 6.651975 TTCCAAAACGAGGCCTTATAAAAA 57.348 33.333 6.77 0.00 0.00 1.94
311 325 6.294843 CCTTTCCAAAACGAGGCCTTATAAAA 60.295 38.462 6.77 0.00 0.00 1.52
312 326 5.184287 CCTTTCCAAAACGAGGCCTTATAAA 59.816 40.000 6.77 0.00 0.00 1.40
313 327 4.703093 CCTTTCCAAAACGAGGCCTTATAA 59.297 41.667 6.77 0.00 0.00 0.98
314 328 4.263594 ACCTTTCCAAAACGAGGCCTTATA 60.264 41.667 6.77 0.00 32.42 0.98
315 329 3.089284 CCTTTCCAAAACGAGGCCTTAT 58.911 45.455 6.77 0.00 0.00 1.73
316 330 2.158579 ACCTTTCCAAAACGAGGCCTTA 60.159 45.455 6.77 0.00 32.42 2.69
317 331 1.328279 CCTTTCCAAAACGAGGCCTT 58.672 50.000 6.77 0.00 0.00 4.35
318 332 0.185175 ACCTTTCCAAAACGAGGCCT 59.815 50.000 3.86 3.86 32.42 5.19
319 333 0.313987 CACCTTTCCAAAACGAGGCC 59.686 55.000 0.00 0.00 32.42 5.19
320 334 0.318699 GCACCTTTCCAAAACGAGGC 60.319 55.000 0.00 0.00 32.42 4.70
321 335 1.028905 TGCACCTTTCCAAAACGAGG 58.971 50.000 0.00 0.00 35.39 4.63
322 336 2.664916 CATGCACCTTTCCAAAACGAG 58.335 47.619 0.00 0.00 0.00 4.18
323 337 1.269517 GCATGCACCTTTCCAAAACGA 60.270 47.619 14.21 0.00 0.00 3.85
324 338 1.139163 GCATGCACCTTTCCAAAACG 58.861 50.000 14.21 0.00 0.00 3.60
325 339 2.237393 TGCATGCACCTTTCCAAAAC 57.763 45.000 18.46 0.00 0.00 2.43
326 340 2.768698 CATGCATGCACCTTTCCAAAA 58.231 42.857 25.37 0.00 0.00 2.44
327 341 2.459060 CATGCATGCACCTTTCCAAA 57.541 45.000 25.37 0.00 0.00 3.28
338 352 6.495892 CCAATGAAATGGTTGCATGCATGC 62.496 45.833 38.71 38.71 43.53 4.06
339 353 3.064682 CCAATGAAATGGTTGCATGCATG 59.935 43.478 23.37 22.70 35.65 4.06
340 354 3.275143 CCAATGAAATGGTTGCATGCAT 58.725 40.909 23.37 4.78 35.65 3.96
341 355 2.701107 CCAATGAAATGGTTGCATGCA 58.299 42.857 18.46 18.46 35.65 3.96
350 364 5.470777 ACTTTCAATGCAACCAATGAAATGG 59.529 36.000 12.32 0.00 45.06 3.16
351 365 6.203145 TGACTTTCAATGCAACCAATGAAATG 59.797 34.615 12.32 10.12 45.06 2.32
352 366 6.289834 TGACTTTCAATGCAACCAATGAAAT 58.710 32.000 12.32 6.35 45.06 2.17
353 367 5.668471 TGACTTTCAATGCAACCAATGAAA 58.332 33.333 0.00 2.84 44.40 2.69
354 368 5.273674 TGACTTTCAATGCAACCAATGAA 57.726 34.783 0.00 0.00 38.68 2.57
355 369 4.933505 TGACTTTCAATGCAACCAATGA 57.066 36.364 0.00 0.00 0.00 2.57
356 370 5.467399 ACAATGACTTTCAATGCAACCAATG 59.533 36.000 0.00 0.00 30.64 2.82
357 371 5.613329 ACAATGACTTTCAATGCAACCAAT 58.387 33.333 0.00 0.00 30.64 3.16
358 372 5.021033 ACAATGACTTTCAATGCAACCAA 57.979 34.783 0.00 0.00 30.64 3.67
359 373 4.669206 ACAATGACTTTCAATGCAACCA 57.331 36.364 0.00 0.00 30.64 3.67
360 374 4.810491 ACAACAATGACTTTCAATGCAACC 59.190 37.500 0.00 0.00 30.64 3.77
361 375 5.971895 ACAACAATGACTTTCAATGCAAC 57.028 34.783 0.00 0.00 30.64 4.17
362 376 5.293814 CCAACAACAATGACTTTCAATGCAA 59.706 36.000 0.00 0.00 30.64 4.08
363 377 4.809958 CCAACAACAATGACTTTCAATGCA 59.190 37.500 0.00 0.00 30.64 3.96
364 378 4.810491 ACCAACAACAATGACTTTCAATGC 59.190 37.500 0.00 0.00 30.64 3.56
365 379 5.276963 GCACCAACAACAATGACTTTCAATG 60.277 40.000 0.00 0.00 33.66 2.82
366 380 4.810491 GCACCAACAACAATGACTTTCAAT 59.190 37.500 0.00 0.00 0.00 2.57
367 381 4.180057 GCACCAACAACAATGACTTTCAA 58.820 39.130 0.00 0.00 0.00 2.69
368 382 3.430098 GGCACCAACAACAATGACTTTCA 60.430 43.478 0.00 0.00 0.00 2.69
369 383 3.123050 GGCACCAACAACAATGACTTTC 58.877 45.455 0.00 0.00 0.00 2.62
370 384 2.499289 TGGCACCAACAACAATGACTTT 59.501 40.909 0.00 0.00 0.00 2.66
371 385 2.106566 TGGCACCAACAACAATGACTT 58.893 42.857 0.00 0.00 0.00 3.01
372 386 1.774110 TGGCACCAACAACAATGACT 58.226 45.000 0.00 0.00 0.00 3.41
373 387 2.035704 TCATGGCACCAACAACAATGAC 59.964 45.455 0.00 0.00 0.00 3.06
374 388 2.035704 GTCATGGCACCAACAACAATGA 59.964 45.455 0.00 0.00 0.00 2.57
375 389 2.036217 AGTCATGGCACCAACAACAATG 59.964 45.455 0.00 0.00 0.00 2.82
376 390 2.036217 CAGTCATGGCACCAACAACAAT 59.964 45.455 0.00 0.00 0.00 2.71
377 391 1.408340 CAGTCATGGCACCAACAACAA 59.592 47.619 0.00 0.00 0.00 2.83
378 392 1.031235 CAGTCATGGCACCAACAACA 58.969 50.000 0.00 0.00 0.00 3.33
379 393 0.314935 CCAGTCATGGCACCAACAAC 59.685 55.000 0.00 0.00 40.52 3.32
380 394 0.827089 CCCAGTCATGGCACCAACAA 60.827 55.000 0.00 0.00 46.19 2.83
381 395 1.228521 CCCAGTCATGGCACCAACA 60.229 57.895 0.00 0.00 46.19 3.33
382 396 0.539438 TTCCCAGTCATGGCACCAAC 60.539 55.000 0.00 0.00 46.19 3.77
383 397 0.187117 TTTCCCAGTCATGGCACCAA 59.813 50.000 0.00 0.00 46.19 3.67
384 398 0.409092 ATTTCCCAGTCATGGCACCA 59.591 50.000 0.00 0.00 46.19 4.17
385 399 1.560505 AATTTCCCAGTCATGGCACC 58.439 50.000 0.00 0.00 46.19 5.01
386 400 5.359576 TGTATTAATTTCCCAGTCATGGCAC 59.640 40.000 0.00 0.00 46.19 5.01
387 401 5.359576 GTGTATTAATTTCCCAGTCATGGCA 59.640 40.000 0.00 0.00 46.19 4.92
388 402 5.594317 AGTGTATTAATTTCCCAGTCATGGC 59.406 40.000 0.00 0.00 46.19 4.40
390 404 8.279970 TGAAGTGTATTAATTTCCCAGTCATG 57.720 34.615 0.00 0.00 0.00 3.07
391 405 8.906867 CATGAAGTGTATTAATTTCCCAGTCAT 58.093 33.333 0.00 0.00 0.00 3.06
392 406 7.148086 GCATGAAGTGTATTAATTTCCCAGTCA 60.148 37.037 0.00 0.00 0.00 3.41
393 407 7.196331 GCATGAAGTGTATTAATTTCCCAGTC 58.804 38.462 0.00 0.00 0.00 3.51
394 408 6.183360 CGCATGAAGTGTATTAATTTCCCAGT 60.183 38.462 0.00 0.00 0.00 4.00
395 409 6.183360 ACGCATGAAGTGTATTAATTTCCCAG 60.183 38.462 0.00 0.00 39.69 4.45
396 410 5.650266 ACGCATGAAGTGTATTAATTTCCCA 59.350 36.000 0.00 0.00 39.69 4.37
397 411 5.971202 CACGCATGAAGTGTATTAATTTCCC 59.029 40.000 12.00 0.00 39.40 3.97
423 437 4.449405 CACATGCATGCAGTCAATCAAAAA 59.551 37.500 26.69 0.00 0.00 1.94
424 438 3.991121 CACATGCATGCAGTCAATCAAAA 59.009 39.130 26.69 0.00 0.00 2.44
425 439 3.256136 TCACATGCATGCAGTCAATCAAA 59.744 39.130 26.69 0.00 0.00 2.69
426 440 2.820787 TCACATGCATGCAGTCAATCAA 59.179 40.909 26.69 0.00 0.00 2.57
427 441 2.422127 CTCACATGCATGCAGTCAATCA 59.578 45.455 26.69 0.00 0.00 2.57
428 442 2.681344 TCTCACATGCATGCAGTCAATC 59.319 45.455 26.69 0.00 0.00 2.67
429 443 2.683362 CTCTCACATGCATGCAGTCAAT 59.317 45.455 26.69 5.62 0.00 2.57
430 444 2.081462 CTCTCACATGCATGCAGTCAA 58.919 47.619 26.69 10.65 0.00 3.18
431 445 1.276989 TCTCTCACATGCATGCAGTCA 59.723 47.619 26.69 9.89 0.00 3.41
432 446 1.934525 CTCTCTCACATGCATGCAGTC 59.065 52.381 26.69 0.00 0.00 3.51
433 447 1.278413 ACTCTCTCACATGCATGCAGT 59.722 47.619 26.69 19.79 0.00 4.40
434 448 1.666189 CACTCTCTCACATGCATGCAG 59.334 52.381 26.69 21.02 0.00 4.41
435 449 1.734163 CACTCTCTCACATGCATGCA 58.266 50.000 26.53 25.04 0.00 3.96
436 450 0.377554 GCACTCTCTCACATGCATGC 59.622 55.000 26.53 11.82 38.00 4.06
437 451 1.734163 TGCACTCTCTCACATGCATG 58.266 50.000 25.09 25.09 42.92 4.06
440 454 1.400846 CCAATGCACTCTCTCACATGC 59.599 52.381 0.00 0.00 38.59 4.06
441 455 2.014857 CCCAATGCACTCTCTCACATG 58.985 52.381 0.00 0.00 0.00 3.21
442 456 1.911357 TCCCAATGCACTCTCTCACAT 59.089 47.619 0.00 0.00 0.00 3.21
443 457 1.277273 CTCCCAATGCACTCTCTCACA 59.723 52.381 0.00 0.00 0.00 3.58
444 458 1.277557 ACTCCCAATGCACTCTCTCAC 59.722 52.381 0.00 0.00 0.00 3.51
445 459 1.277273 CACTCCCAATGCACTCTCTCA 59.723 52.381 0.00 0.00 0.00 3.27
446 460 1.552337 TCACTCCCAATGCACTCTCTC 59.448 52.381 0.00 0.00 0.00 3.20
447 461 1.649321 TCACTCCCAATGCACTCTCT 58.351 50.000 0.00 0.00 0.00 3.10
448 462 2.479566 TTCACTCCCAATGCACTCTC 57.520 50.000 0.00 0.00 0.00 3.20
449 463 2.957402 TTTCACTCCCAATGCACTCT 57.043 45.000 0.00 0.00 0.00 3.24
450 464 2.165030 CCATTTCACTCCCAATGCACTC 59.835 50.000 0.00 0.00 0.00 3.51
451 465 2.173519 CCATTTCACTCCCAATGCACT 58.826 47.619 0.00 0.00 0.00 4.40
452 466 2.170166 TCCATTTCACTCCCAATGCAC 58.830 47.619 0.00 0.00 0.00 4.57
453 467 2.601240 TCCATTTCACTCCCAATGCA 57.399 45.000 0.00 0.00 0.00 3.96
454 468 3.091545 TCTTCCATTTCACTCCCAATGC 58.908 45.455 0.00 0.00 0.00 3.56
455 469 4.338879 ACTCTTCCATTTCACTCCCAATG 58.661 43.478 0.00 0.00 0.00 2.82
456 470 4.664688 ACTCTTCCATTTCACTCCCAAT 57.335 40.909 0.00 0.00 0.00 3.16
457 471 4.453480 AACTCTTCCATTTCACTCCCAA 57.547 40.909 0.00 0.00 0.00 4.12
458 472 5.073144 AGTTAACTCTTCCATTTCACTCCCA 59.927 40.000 1.12 0.00 0.00 4.37
459 473 5.561679 AGTTAACTCTTCCATTTCACTCCC 58.438 41.667 1.12 0.00 0.00 4.30
468 482 9.975218 ACCAAAACATATAGTTAACTCTTCCAT 57.025 29.630 12.39 2.09 40.26 3.41
469 483 9.802039 AACCAAAACATATAGTTAACTCTTCCA 57.198 29.630 12.39 0.00 40.26 3.53
484 498 9.403583 AGACAACTTCTCTTAAACCAAAACATA 57.596 29.630 0.00 0.00 0.00 2.29
485 499 8.293699 AGACAACTTCTCTTAAACCAAAACAT 57.706 30.769 0.00 0.00 0.00 2.71
486 500 7.696992 AGACAACTTCTCTTAAACCAAAACA 57.303 32.000 0.00 0.00 0.00 2.83
487 501 8.981724 AAAGACAACTTCTCTTAAACCAAAAC 57.018 30.769 0.00 0.00 35.05 2.43
490 504 8.403236 GCTTAAAGACAACTTCTCTTAAACCAA 58.597 33.333 0.00 0.00 35.05 3.67
491 505 7.012989 GGCTTAAAGACAACTTCTCTTAAACCA 59.987 37.037 0.00 0.00 35.05 3.67
492 506 7.228906 AGGCTTAAAGACAACTTCTCTTAAACC 59.771 37.037 0.00 0.00 35.05 3.27
493 507 8.155821 AGGCTTAAAGACAACTTCTCTTAAAC 57.844 34.615 0.00 0.00 35.05 2.01
494 508 9.841295 TTAGGCTTAAAGACAACTTCTCTTAAA 57.159 29.630 0.00 0.00 35.05 1.52
500 514 9.011095 GGTTTATTAGGCTTAAAGACAACTTCT 57.989 33.333 0.00 0.00 35.05 2.85
501 515 8.242053 GGGTTTATTAGGCTTAAAGACAACTTC 58.758 37.037 0.00 0.00 35.05 3.01
502 516 7.094506 CGGGTTTATTAGGCTTAAAGACAACTT 60.095 37.037 0.00 0.00 38.05 2.66
503 517 6.373495 CGGGTTTATTAGGCTTAAAGACAACT 59.627 38.462 0.00 0.00 0.00 3.16
504 518 6.372381 TCGGGTTTATTAGGCTTAAAGACAAC 59.628 38.462 0.00 0.00 0.00 3.32
505 519 6.474630 TCGGGTTTATTAGGCTTAAAGACAA 58.525 36.000 0.00 0.00 0.00 3.18
506 520 6.052405 TCGGGTTTATTAGGCTTAAAGACA 57.948 37.500 0.00 0.00 0.00 3.41
507 521 6.456047 CGTTCGGGTTTATTAGGCTTAAAGAC 60.456 42.308 0.00 0.00 0.00 3.01
508 522 5.581874 CGTTCGGGTTTATTAGGCTTAAAGA 59.418 40.000 0.00 0.00 0.00 2.52
509 523 5.220719 CCGTTCGGGTTTATTAGGCTTAAAG 60.221 44.000 3.04 0.00 0.00 1.85
510 524 4.635324 CCGTTCGGGTTTATTAGGCTTAAA 59.365 41.667 3.04 0.00 0.00 1.52
511 525 4.081198 TCCGTTCGGGTTTATTAGGCTTAA 60.081 41.667 11.37 0.00 37.00 1.85
512 526 3.450457 TCCGTTCGGGTTTATTAGGCTTA 59.550 43.478 11.37 0.00 37.00 3.09
513 527 2.236893 TCCGTTCGGGTTTATTAGGCTT 59.763 45.455 11.37 0.00 37.00 4.35
514 528 1.832998 TCCGTTCGGGTTTATTAGGCT 59.167 47.619 11.37 0.00 37.00 4.58
515 529 2.159057 TCTCCGTTCGGGTTTATTAGGC 60.159 50.000 11.37 0.00 37.00 3.93
516 530 3.382546 TCTCTCCGTTCGGGTTTATTAGG 59.617 47.826 11.37 0.00 37.00 2.69
517 531 4.097589 ACTCTCTCCGTTCGGGTTTATTAG 59.902 45.833 11.37 0.00 37.00 1.73
518 532 4.019174 ACTCTCTCCGTTCGGGTTTATTA 58.981 43.478 11.37 0.00 37.00 0.98
519 533 2.830321 ACTCTCTCCGTTCGGGTTTATT 59.170 45.455 11.37 0.00 37.00 1.40
520 534 2.454538 ACTCTCTCCGTTCGGGTTTAT 58.545 47.619 11.37 0.00 37.00 1.40
521 535 1.915141 ACTCTCTCCGTTCGGGTTTA 58.085 50.000 11.37 0.00 37.00 2.01
522 536 1.915141 TACTCTCTCCGTTCGGGTTT 58.085 50.000 11.37 0.00 37.00 3.27
523 537 1.749634 CATACTCTCTCCGTTCGGGTT 59.250 52.381 11.37 0.00 37.00 4.11
524 538 1.064906 TCATACTCTCTCCGTTCGGGT 60.065 52.381 11.37 3.70 37.00 5.28
525 539 1.676746 TCATACTCTCTCCGTTCGGG 58.323 55.000 11.37 2.78 37.02 5.14
526 540 4.316645 TCTATCATACTCTCTCCGTTCGG 58.683 47.826 4.74 4.74 0.00 4.30
527 541 7.254624 CCATATCTATCATACTCTCTCCGTTCG 60.255 44.444 0.00 0.00 0.00 3.95
528 542 7.012894 CCCATATCTATCATACTCTCTCCGTTC 59.987 44.444 0.00 0.00 0.00 3.95
529 543 6.831353 CCCATATCTATCATACTCTCTCCGTT 59.169 42.308 0.00 0.00 0.00 4.44
530 544 6.069323 ACCCATATCTATCATACTCTCTCCGT 60.069 42.308 0.00 0.00 0.00 4.69
531 545 6.361433 ACCCATATCTATCATACTCTCTCCG 58.639 44.000 0.00 0.00 0.00 4.63
532 546 7.350382 TGACCCATATCTATCATACTCTCTCC 58.650 42.308 0.00 0.00 0.00 3.71
533 547 8.815565 TTGACCCATATCTATCATACTCTCTC 57.184 38.462 0.00 0.00 0.00 3.20
534 548 9.199645 CATTGACCCATATCTATCATACTCTCT 57.800 37.037 0.00 0.00 0.00 3.10
535 549 8.976353 ACATTGACCCATATCTATCATACTCTC 58.024 37.037 0.00 0.00 0.00 3.20
536 550 8.907829 ACATTGACCCATATCTATCATACTCT 57.092 34.615 0.00 0.00 0.00 3.24
537 551 8.753133 TGACATTGACCCATATCTATCATACTC 58.247 37.037 0.00 0.00 0.00 2.59
538 552 8.535335 GTGACATTGACCCATATCTATCATACT 58.465 37.037 0.00 0.00 0.00 2.12
539 553 8.314021 TGTGACATTGACCCATATCTATCATAC 58.686 37.037 0.00 0.00 0.00 2.39
540 554 8.434589 TGTGACATTGACCCATATCTATCATA 57.565 34.615 0.00 0.00 0.00 2.15
541 555 7.320384 TGTGACATTGACCCATATCTATCAT 57.680 36.000 0.00 0.00 0.00 2.45
542 556 6.745794 TGTGACATTGACCCATATCTATCA 57.254 37.500 0.00 0.00 0.00 2.15
543 557 8.627208 ATTTGTGACATTGACCCATATCTATC 57.373 34.615 0.00 0.00 0.00 2.08
544 558 9.425248 AAATTTGTGACATTGACCCATATCTAT 57.575 29.630 0.00 0.00 0.00 1.98
545 559 8.685427 CAAATTTGTGACATTGACCCATATCTA 58.315 33.333 10.15 0.00 0.00 1.98
546 560 7.364056 CCAAATTTGTGACATTGACCCATATCT 60.364 37.037 16.73 0.00 0.00 1.98
547 561 6.757947 CCAAATTTGTGACATTGACCCATATC 59.242 38.462 16.73 0.00 0.00 1.63
556 570 7.870826 TGTACTACTCCAAATTTGTGACATTG 58.129 34.615 16.73 0.11 0.00 2.82
585 599 1.069978 GGGGTGTTCAAAACATGTGGG 59.930 52.381 0.00 0.00 44.35 4.61
586 600 1.759445 TGGGGTGTTCAAAACATGTGG 59.241 47.619 0.00 0.00 44.35 4.17
615 629 3.447586 GCACTCTTATCCAGTGGTACTCA 59.552 47.826 9.54 0.00 41.49 3.41
646 660 4.088762 CGTGTGCCACATGCGTCC 62.089 66.667 3.75 0.00 45.60 4.79
689 703 2.032550 CGAATTCGCGTTACTCCCTCTA 59.967 50.000 15.93 0.00 0.00 2.43
739 757 1.442857 GCAGTGACGAGTCGACTGG 60.443 63.158 25.58 24.67 38.24 4.00
742 770 2.126424 GGGCAGTGACGAGTCGAC 60.126 66.667 21.50 14.39 0.00 4.20
888 917 1.134759 TGCTTGCTTGCTTGCTTGAAA 60.135 42.857 10.35 0.00 0.00 2.69
909 938 2.043450 CGGTCCCTCTCCTCTGCT 60.043 66.667 0.00 0.00 0.00 4.24
910 939 3.151022 CCGGTCCCTCTCCTCTGC 61.151 72.222 0.00 0.00 0.00 4.26
911 940 2.443016 CCCGGTCCCTCTCCTCTG 60.443 72.222 0.00 0.00 0.00 3.35
912 941 2.617538 TCCCGGTCCCTCTCCTCT 60.618 66.667 0.00 0.00 0.00 3.69
948 977 1.644780 GTCGACGAAGAAAAGAGCTCG 59.355 52.381 8.37 0.00 0.00 5.03
1053 1082 3.532155 GCGATCAGCCCGTCCTCT 61.532 66.667 0.00 0.00 40.81 3.69
1098 1127 3.045142 GTCTCCAACGGACGGACA 58.955 61.111 0.00 0.00 30.36 4.02
1284 1313 1.067635 CACGGCAAAGAGGGGAAATTG 60.068 52.381 0.00 0.00 0.00 2.32
1434 1463 2.765807 ATCCAGGAGCGGGACAGG 60.766 66.667 0.00 0.00 37.23 4.00
1467 1496 4.168101 AGAGGAACCAGTGAATAACCTGA 58.832 43.478 0.00 0.00 0.00 3.86
1785 1940 0.103390 TCACAAGTGAAGAACGGCGA 59.897 50.000 16.62 0.00 36.53 5.54
1832 1990 9.476202 AAAGCCAACACTGATAAAATAGAAAAC 57.524 29.630 0.00 0.00 0.00 2.43
1847 2032 7.680442 AAAATTAAAACACAAAGCCAACACT 57.320 28.000 0.00 0.00 0.00 3.55
1900 2088 3.876309 ACTCCAACAACAACCCTACAT 57.124 42.857 0.00 0.00 0.00 2.29
1928 2120 9.539825 GCATCAAATAACTCATCTCTTCTCTTA 57.460 33.333 0.00 0.00 0.00 2.10
1961 2154 4.083696 GGCCAAAATGTGCAAAGAATTCTG 60.084 41.667 9.17 0.00 0.00 3.02
1962 2155 4.067192 GGCCAAAATGTGCAAAGAATTCT 58.933 39.130 0.88 0.88 0.00 2.40
2003 2198 1.681166 CCCAAGAGGCTCAGACAATGG 60.681 57.143 18.26 13.46 0.00 3.16
2004 2199 1.280133 TCCCAAGAGGCTCAGACAATG 59.720 52.381 18.26 5.50 34.51 2.82
2010 2205 2.575805 AAAACTCCCAAGAGGCTCAG 57.424 50.000 18.26 8.64 45.11 3.35
2028 2223 5.010933 TCCATGGGTTTAGCGTGAAATAAA 58.989 37.500 13.02 0.00 0.00 1.40
2068 2263 6.556495 AGAGATTCATGTACTGACCCATATGT 59.444 38.462 1.24 0.00 32.17 2.29
2089 2284 1.257750 TAAGCTGAGCGGGCAAGAGA 61.258 55.000 0.00 0.00 0.00 3.10
2108 2303 1.684049 CGAGAGGAACAGGGAGCCT 60.684 63.158 0.00 0.00 33.97 4.58
2145 2341 5.738619 TTGTGAGATAGCAGTGGACTTAA 57.261 39.130 0.00 0.00 0.00 1.85
2147 2343 4.623932 TTTGTGAGATAGCAGTGGACTT 57.376 40.909 0.00 0.00 0.00 3.01
2522 2791 1.066858 TCTGGTGCTTCGAGGATTGTC 60.067 52.381 0.00 0.00 0.00 3.18
2527 2797 0.391661 GCATTCTGGTGCTTCGAGGA 60.392 55.000 0.00 0.00 41.82 3.71
2544 2814 2.224843 TGAGCTCCCTCAAATTGAAGCA 60.225 45.455 17.25 0.00 44.79 3.91
2606 2876 8.467598 TGTATAAACACTCACTCCAACTATCTC 58.532 37.037 0.00 0.00 0.00 2.75
2633 2910 8.457261 GTTTCTATTACGGTCTACTTTCTCTGA 58.543 37.037 0.00 0.00 0.00 3.27
2642 2919 8.699283 ACATTTCTGTTTCTATTACGGTCTAC 57.301 34.615 0.00 0.00 28.70 2.59
2688 2965 6.873997 ACAAATCGATACCAATACTGACAGA 58.126 36.000 10.08 0.00 0.00 3.41
2705 2982 3.081061 TGAATTGAGGGTGGACAAATCG 58.919 45.455 0.00 0.00 31.18 3.34
2722 2999 2.140717 GGTGGTCGAAGTCGTTTGAAT 58.859 47.619 0.00 0.00 40.80 2.57
2754 3031 4.238514 GTGCAAGTTCTACAGTACAGGAG 58.761 47.826 0.00 0.00 0.00 3.69
2832 3114 1.167851 CGTGAACACCTGCATCCATT 58.832 50.000 0.00 0.00 0.00 3.16
2890 3172 0.524862 CGTTGTACGCCAGGTAGAGT 59.475 55.000 0.00 0.00 33.65 3.24
3144 3426 0.249073 CCGTCATCGAGTAGCCAAGG 60.249 60.000 0.00 0.00 39.71 3.61
3298 3583 6.561614 CAGAAGATTCAAAGCTAGTACGGTA 58.438 40.000 0.00 0.00 0.00 4.02
3301 3586 5.005203 CAGCAGAAGATTCAAAGCTAGTACG 59.995 44.000 6.80 0.00 33.11 3.67
3391 3676 6.712998 AGCTCATCGTAGTTACATAGATCACT 59.287 38.462 0.00 0.00 0.00 3.41
3421 3706 6.715347 ACAAGCAACTGAACTCCTTAAATT 57.285 33.333 0.00 0.00 0.00 1.82
3480 3765 2.094390 CGGAGGGAGTATTTGTGAACGA 60.094 50.000 0.00 0.00 0.00 3.85
3519 3804 9.567776 TGTAGTCATTTGTTGGAATCTCTAAAA 57.432 29.630 0.00 0.00 0.00 1.52
3520 3805 9.739276 ATGTAGTCATTTGTTGGAATCTCTAAA 57.261 29.630 0.00 0.00 0.00 1.85
3522 3807 9.817809 GTATGTAGTCATTTGTTGGAATCTCTA 57.182 33.333 0.00 0.00 35.70 2.43
3523 3808 7.492669 CGTATGTAGTCATTTGTTGGAATCTCT 59.507 37.037 0.00 0.00 35.70 3.10
3524 3809 7.491372 TCGTATGTAGTCATTTGTTGGAATCTC 59.509 37.037 0.00 0.00 35.70 2.75
3525 3810 7.327975 TCGTATGTAGTCATTTGTTGGAATCT 58.672 34.615 0.00 0.00 35.70 2.40
3526 3811 7.534085 TCGTATGTAGTCATTTGTTGGAATC 57.466 36.000 0.00 0.00 35.70 2.52
3527 3812 7.915293 TTCGTATGTAGTCATTTGTTGGAAT 57.085 32.000 0.00 0.00 35.70 3.01
3528 3813 7.731882 TTTCGTATGTAGTCATTTGTTGGAA 57.268 32.000 0.00 0.00 35.70 3.53
3529 3814 7.915293 ATTTCGTATGTAGTCATTTGTTGGA 57.085 32.000 0.00 0.00 35.70 3.53
3538 3823 9.863845 TCACTCATTTTATTTCGTATGTAGTCA 57.136 29.630 0.00 0.00 0.00 3.41
3547 3832 9.838339 AGGATAGATTCACTCATTTTATTTCGT 57.162 29.630 0.00 0.00 0.00 3.85
3637 3922 9.392259 CCTCCGTTCCTAAATATAAGTTCTTTT 57.608 33.333 0.00 0.00 0.00 2.27
3638 3923 7.991460 CCCTCCGTTCCTAAATATAAGTTCTTT 59.009 37.037 0.00 0.00 0.00 2.52
3639 3924 7.346436 TCCCTCCGTTCCTAAATATAAGTTCTT 59.654 37.037 0.00 0.00 0.00 2.52
3640 3925 6.842807 TCCCTCCGTTCCTAAATATAAGTTCT 59.157 38.462 0.00 0.00 0.00 3.01
3641 3926 7.059202 TCCCTCCGTTCCTAAATATAAGTTC 57.941 40.000 0.00 0.00 0.00 3.01
3642 3927 6.614496 ACTCCCTCCGTTCCTAAATATAAGTT 59.386 38.462 0.00 0.00 0.00 2.66
3643 3928 6.141790 ACTCCCTCCGTTCCTAAATATAAGT 58.858 40.000 0.00 0.00 0.00 2.24
3644 3929 6.667558 ACTCCCTCCGTTCCTAAATATAAG 57.332 41.667 0.00 0.00 0.00 1.73
3645 3930 7.951806 TCATACTCCCTCCGTTCCTAAATATAA 59.048 37.037 0.00 0.00 0.00 0.98
3646 3931 7.472741 TCATACTCCCTCCGTTCCTAAATATA 58.527 38.462 0.00 0.00 0.00 0.86
3647 3932 6.320518 TCATACTCCCTCCGTTCCTAAATAT 58.679 40.000 0.00 0.00 0.00 1.28
3648 3933 5.708544 TCATACTCCCTCCGTTCCTAAATA 58.291 41.667 0.00 0.00 0.00 1.40
3649 3934 4.553678 TCATACTCCCTCCGTTCCTAAAT 58.446 43.478 0.00 0.00 0.00 1.40
3650 3935 3.958798 CTCATACTCCCTCCGTTCCTAAA 59.041 47.826 0.00 0.00 0.00 1.85
3651 3936 3.203710 TCTCATACTCCCTCCGTTCCTAA 59.796 47.826 0.00 0.00 0.00 2.69
3652 3937 2.781757 TCTCATACTCCCTCCGTTCCTA 59.218 50.000 0.00 0.00 0.00 2.94
3653 3938 1.569548 TCTCATACTCCCTCCGTTCCT 59.430 52.381 0.00 0.00 0.00 3.36
3654 3939 2.068834 TCTCATACTCCCTCCGTTCC 57.931 55.000 0.00 0.00 0.00 3.62
3655 3940 6.885376 TCTTATATCTCATACTCCCTCCGTTC 59.115 42.308 0.00 0.00 0.00 3.95
3656 3941 6.791371 TCTTATATCTCATACTCCCTCCGTT 58.209 40.000 0.00 0.00 0.00 4.44
3657 3942 6.390048 TCTTATATCTCATACTCCCTCCGT 57.610 41.667 0.00 0.00 0.00 4.69
3658 3943 6.831353 ACATCTTATATCTCATACTCCCTCCG 59.169 42.308 0.00 0.00 0.00 4.63
3659 3944 8.602472 AACATCTTATATCTCATACTCCCTCC 57.398 38.462 0.00 0.00 0.00 4.30
3660 3945 9.474313 AGAACATCTTATATCTCATACTCCCTC 57.526 37.037 0.00 0.00 0.00 4.30
3761 4046 5.588648 TGTAACACTCCCTCTTTTGACAAAG 59.411 40.000 0.10 0.00 40.91 2.77
3780 4065 8.075593 TCAGTTCCGTACTTATTTTGTGTAAC 57.924 34.615 0.00 0.00 33.85 2.50
3783 4068 5.178809 GCTCAGTTCCGTACTTATTTTGTGT 59.821 40.000 0.00 0.00 33.85 3.72
3794 4079 5.975939 AGATTTTATACGCTCAGTTCCGTAC 59.024 40.000 0.00 0.00 41.95 3.67
3822 4107 0.676466 CTGGCGTATGCAGGTTCCAA 60.676 55.000 9.59 0.00 45.35 3.53
3852 4137 2.225491 GTGCATTTAACTCCTCAACGCA 59.775 45.455 0.00 0.00 0.00 5.24
3857 4142 4.646945 TGGTTTTGTGCATTTAACTCCTCA 59.353 37.500 0.00 0.00 0.00 3.86
3881 4166 6.032042 GCAAAATATCACGAAACGTAAAGTGG 59.968 38.462 14.39 2.02 38.32 4.00
3887 4172 3.374678 GGGGCAAAATATCACGAAACGTA 59.625 43.478 0.00 0.00 38.32 3.57
3889 4174 2.789779 CGGGGCAAAATATCACGAAACG 60.790 50.000 0.00 0.00 0.00 3.60
3895 4206 2.096248 TGGTTCGGGGCAAAATATCAC 58.904 47.619 0.00 0.00 0.00 3.06
3907 4218 5.050431 GTCATTGTCAAATTTTTGGTTCGGG 60.050 40.000 3.38 0.00 38.66 5.14
3941 4252 1.144936 GGGATCAGACAAGGGCTCG 59.855 63.158 0.00 0.00 0.00 5.03
3953 4264 1.191489 TGTCGGACAGCAAGGGATCA 61.191 55.000 6.76 0.00 0.00 2.92
3987 4298 1.608055 TTGGACAGAGTCGTTACCGA 58.392 50.000 0.00 0.00 41.73 4.69
3990 4301 1.719780 CGCTTTGGACAGAGTCGTTAC 59.280 52.381 0.00 0.00 32.65 2.50
3996 4307 1.160137 GCAATCGCTTTGGACAGAGT 58.840 50.000 1.01 0.00 35.75 3.24
4004 4315 1.135315 CCCAGTCGCAATCGCTTTG 59.865 57.895 0.00 0.00 38.43 2.77
4012 4323 2.616797 TTTGGTCAGCCCAGTCGCAA 62.617 55.000 0.00 0.00 46.31 4.85
4022 4333 2.943653 CGTTCGGGTTTGGTCAGC 59.056 61.111 0.00 0.00 0.00 4.26
4063 4374 2.370189 GAGAGAGAGAGGAGAGGGAGAG 59.630 59.091 0.00 0.00 0.00 3.20
4064 4375 2.293519 TGAGAGAGAGAGGAGAGGGAGA 60.294 54.545 0.00 0.00 0.00 3.71


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.