Multiple sequence alignment - TraesCS2B01G286300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G286300 chr2B 100.000 2792 0 0 1 2792 394316768 394319559 0.000000e+00 5156.0
1 TraesCS2B01G286300 chr2B 99.359 156 1 0 2138 2293 546207634 546207479 1.640000e-72 283.0
2 TraesCS2B01G286300 chr2B 94.631 149 5 1 159 304 726746969 726746821 7.780000e-56 228.0
3 TraesCS2B01G286300 chr2B 93.960 149 6 1 159 304 726706080 726705932 3.620000e-54 222.0
4 TraesCS2B01G286300 chr2B 85.484 62 8 1 18 78 402260105 402260166 2.320000e-06 63.9
5 TraesCS2B01G286300 chr2D 92.576 1778 73 30 311 2051 325321712 325323467 0.000000e+00 2497.0
6 TraesCS2B01G286300 chr2D 96.209 211 5 2 2563 2770 325323864 325324074 2.660000e-90 342.0
7 TraesCS2B01G286300 chr2A 91.700 1771 61 36 386 2098 392856692 392854950 0.000000e+00 2377.0
8 TraesCS2B01G286300 chr2A 88.249 434 20 13 2363 2770 392853830 392853402 8.990000e-135 490.0
9 TraesCS2B01G286300 chr2A 83.516 91 3 2 2292 2370 392854929 392854839 1.070000e-09 75.0
10 TraesCS2B01G286300 chr4D 100.000 153 0 0 2141 2293 347515993 347516145 1.640000e-72 283.0
11 TraesCS2B01G286300 chr4D 86.275 153 19 2 156 307 499294373 499294222 6.190000e-37 165.0
12 TraesCS2B01G286300 chr4D 91.525 59 4 1 250 307 365183953 365183895 2.310000e-11 80.5
13 TraesCS2B01G286300 chr1A 98.675 151 2 0 2141 2291 436421105 436420955 4.580000e-68 268.0
14 TraesCS2B01G286300 chr6D 95.455 154 7 0 2141 2294 420705959 420705806 2.150000e-61 246.0
15 TraesCS2B01G286300 chr6B 95.302 149 7 0 159 307 611346949 611346801 1.290000e-58 237.0
16 TraesCS2B01G286300 chr4A 94.231 156 8 1 2138 2292 614028555 614028710 1.290000e-58 237.0
17 TraesCS2B01G286300 chr4A 92.053 151 11 1 2141 2291 542783272 542783421 7.840000e-51 211.0
18 TraesCS2B01G286300 chr4A 88.136 59 6 1 21 78 603270044 603270102 4.990000e-08 69.4
19 TraesCS2B01G286300 chr3D 91.975 162 12 1 146 307 545807494 545807654 2.800000e-55 226.0
20 TraesCS2B01G286300 chr5A 91.071 112 9 1 22 132 213717840 213717951 1.730000e-32 150.0
21 TraesCS2B01G286300 chr3B 93.103 58 3 1 22 78 559343086 559343029 1.780000e-12 84.2
22 TraesCS2B01G286300 chr3B 97.368 38 0 1 2256 2292 794598892 794598855 2.320000e-06 63.9


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G286300 chr2B 394316768 394319559 2791 False 5156.000000 5156 100.000000 1 2792 1 chr2B.!!$F1 2791
1 TraesCS2B01G286300 chr2D 325321712 325324074 2362 False 1419.500000 2497 94.392500 311 2770 2 chr2D.!!$F1 2459
2 TraesCS2B01G286300 chr2A 392853402 392856692 3290 True 980.666667 2377 87.821667 386 2770 3 chr2A.!!$R1 2384

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
824 838 0.02877 CTCTCGTAGCCTTGCTCTCG 59.971 60.0 0.0 0.0 40.44 4.04 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2198 2282 0.031414 ACCCCAGCTAATCCTACGGT 60.031 55.0 0.0 0.0 0.0 4.83 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
31 32 6.401047 TTCATATTTGTACTACTCCCTCCG 57.599 41.667 0.00 0.00 0.00 4.63
32 33 4.280174 TCATATTTGTACTACTCCCTCCGC 59.720 45.833 0.00 0.00 0.00 5.54
33 34 1.188863 TTTGTACTACTCCCTCCGCC 58.811 55.000 0.00 0.00 0.00 6.13
34 35 0.685458 TTGTACTACTCCCTCCGCCC 60.685 60.000 0.00 0.00 0.00 6.13
35 36 2.192187 GTACTACTCCCTCCGCCCG 61.192 68.421 0.00 0.00 0.00 6.13
36 37 3.426309 TACTACTCCCTCCGCCCGG 62.426 68.421 0.00 0.00 0.00 5.73
37 38 4.517934 CTACTCCCTCCGCCCGGA 62.518 72.222 0.73 9.31 42.90 5.14
38 39 4.064768 TACTCCCTCCGCCCGGAA 62.065 66.667 0.73 0.00 44.66 4.30
39 40 3.605412 TACTCCCTCCGCCCGGAAA 62.605 63.158 0.73 0.00 44.66 3.13
40 41 2.884179 TACTCCCTCCGCCCGGAAAT 62.884 60.000 0.73 0.00 44.66 2.17
41 42 2.041715 TCCCTCCGCCCGGAAATA 60.042 61.111 0.73 0.00 44.66 1.40
42 43 2.110420 CCCTCCGCCCGGAAATAC 59.890 66.667 0.73 0.00 44.66 1.89
43 44 2.440817 CCCTCCGCCCGGAAATACT 61.441 63.158 0.73 0.00 44.66 2.12
44 45 1.525442 CCTCCGCCCGGAAATACTT 59.475 57.895 0.73 0.00 44.66 2.24
45 46 0.754472 CCTCCGCCCGGAAATACTTA 59.246 55.000 0.73 0.00 44.66 2.24
46 47 1.346722 CCTCCGCCCGGAAATACTTAT 59.653 52.381 0.73 0.00 44.66 1.73
47 48 2.612221 CCTCCGCCCGGAAATACTTATC 60.612 54.545 0.73 0.00 44.66 1.75
48 49 2.036733 CTCCGCCCGGAAATACTTATCA 59.963 50.000 0.73 0.00 44.66 2.15
49 50 2.635915 TCCGCCCGGAAATACTTATCAT 59.364 45.455 0.73 0.00 42.05 2.45
50 51 3.000727 CCGCCCGGAAATACTTATCATC 58.999 50.000 0.73 0.00 37.50 2.92
51 52 3.556213 CCGCCCGGAAATACTTATCATCA 60.556 47.826 0.73 0.00 37.50 3.07
52 53 4.062293 CGCCCGGAAATACTTATCATCAA 58.938 43.478 0.73 0.00 0.00 2.57
53 54 4.513692 CGCCCGGAAATACTTATCATCAAA 59.486 41.667 0.73 0.00 0.00 2.69
54 55 5.008217 CGCCCGGAAATACTTATCATCAAAA 59.992 40.000 0.73 0.00 0.00 2.44
55 56 6.293955 CGCCCGGAAATACTTATCATCAAAAT 60.294 38.462 0.73 0.00 0.00 1.82
56 57 6.863126 GCCCGGAAATACTTATCATCAAAATG 59.137 38.462 0.73 0.00 0.00 2.32
57 58 7.255451 GCCCGGAAATACTTATCATCAAAATGA 60.255 37.037 0.73 0.00 45.73 2.57
58 59 8.629158 CCCGGAAATACTTATCATCAAAATGAA 58.371 33.333 0.73 0.00 44.85 2.57
143 144 8.842358 ATGACAAGTATTTTTAAACGGAGAGA 57.158 30.769 0.00 0.00 0.00 3.10
144 145 8.306680 TGACAAGTATTTTTAAACGGAGAGAG 57.693 34.615 0.00 0.00 0.00 3.20
145 146 7.929785 TGACAAGTATTTTTAAACGGAGAGAGT 59.070 33.333 0.00 0.00 0.00 3.24
146 147 9.415544 GACAAGTATTTTTAAACGGAGAGAGTA 57.584 33.333 0.00 0.00 0.00 2.59
147 148 9.201127 ACAAGTATTTTTAAACGGAGAGAGTAC 57.799 33.333 0.00 0.00 0.00 2.73
148 149 9.199982 CAAGTATTTTTAAACGGAGAGAGTACA 57.800 33.333 0.00 0.00 0.00 2.90
149 150 9.939802 AAGTATTTTTAAACGGAGAGAGTACAT 57.060 29.630 0.00 0.00 0.00 2.29
150 151 9.939802 AGTATTTTTAAACGGAGAGAGTACATT 57.060 29.630 0.00 0.00 0.00 2.71
155 156 8.712285 TTTAAACGGAGAGAGTACATTATTGG 57.288 34.615 0.00 0.00 0.00 3.16
156 157 4.323553 ACGGAGAGAGTACATTATTGGC 57.676 45.455 0.00 0.00 0.00 4.52
157 158 3.961408 ACGGAGAGAGTACATTATTGGCT 59.039 43.478 0.00 0.00 0.00 4.75
158 159 4.038162 ACGGAGAGAGTACATTATTGGCTC 59.962 45.833 0.00 0.00 32.53 4.70
159 160 4.551388 GGAGAGAGTACATTATTGGCTCG 58.449 47.826 0.00 0.00 35.48 5.03
160 161 4.278669 GGAGAGAGTACATTATTGGCTCGA 59.721 45.833 0.00 0.00 35.48 4.04
161 162 5.221263 GGAGAGAGTACATTATTGGCTCGAA 60.221 44.000 0.00 0.00 35.48 3.71
162 163 6.222038 AGAGAGTACATTATTGGCTCGAAA 57.778 37.500 0.00 0.00 35.48 3.46
163 164 6.043411 AGAGAGTACATTATTGGCTCGAAAC 58.957 40.000 0.00 0.00 35.48 2.78
164 165 5.978814 AGAGTACATTATTGGCTCGAAACT 58.021 37.500 0.00 0.00 35.48 2.66
165 166 7.068348 AGAGAGTACATTATTGGCTCGAAACTA 59.932 37.037 0.00 0.00 35.48 2.24
166 167 7.727181 AGAGTACATTATTGGCTCGAAACTAT 58.273 34.615 0.00 0.00 35.48 2.12
167 168 8.204836 AGAGTACATTATTGGCTCGAAACTATT 58.795 33.333 0.00 0.00 35.48 1.73
168 169 8.366671 AGTACATTATTGGCTCGAAACTATTC 57.633 34.615 0.00 0.00 0.00 1.75
169 170 8.204836 AGTACATTATTGGCTCGAAACTATTCT 58.795 33.333 0.00 0.00 33.17 2.40
170 171 9.472361 GTACATTATTGGCTCGAAACTATTCTA 57.528 33.333 0.00 0.00 33.17 2.10
171 172 8.366671 ACATTATTGGCTCGAAACTATTCTAC 57.633 34.615 0.00 0.00 33.17 2.59
172 173 7.985184 ACATTATTGGCTCGAAACTATTCTACA 59.015 33.333 0.00 0.00 33.17 2.74
173 174 7.766219 TTATTGGCTCGAAACTATTCTACAC 57.234 36.000 0.00 0.00 33.17 2.90
174 175 4.794278 TGGCTCGAAACTATTCTACACA 57.206 40.909 0.00 0.00 33.17 3.72
175 176 4.491676 TGGCTCGAAACTATTCTACACAC 58.508 43.478 0.00 0.00 33.17 3.82
176 177 3.546670 GGCTCGAAACTATTCTACACACG 59.453 47.826 0.00 0.00 33.17 4.49
177 178 4.409570 GCTCGAAACTATTCTACACACGA 58.590 43.478 0.00 0.00 33.17 4.35
178 179 4.262510 GCTCGAAACTATTCTACACACGAC 59.737 45.833 0.00 0.00 33.17 4.34
179 180 5.618056 TCGAAACTATTCTACACACGACT 57.382 39.130 0.00 0.00 33.17 4.18
180 181 5.388111 TCGAAACTATTCTACACACGACTG 58.612 41.667 0.00 0.00 33.17 3.51
181 182 4.030306 CGAAACTATTCTACACACGACTGC 59.970 45.833 0.00 0.00 33.17 4.40
182 183 3.132629 ACTATTCTACACACGACTGCG 57.867 47.619 0.00 0.00 44.79 5.18
183 184 1.846782 CTATTCTACACACGACTGCGC 59.153 52.381 0.00 0.00 42.48 6.09
184 185 0.038618 ATTCTACACACGACTGCGCA 60.039 50.000 10.98 10.98 42.48 6.09
185 186 0.038618 TTCTACACACGACTGCGCAT 60.039 50.000 12.24 0.17 42.48 4.73
186 187 0.732538 TCTACACACGACTGCGCATG 60.733 55.000 12.24 9.22 42.48 4.06
187 188 2.283780 CTACACACGACTGCGCATGC 62.284 60.000 12.24 7.91 42.48 4.06
197 198 3.365955 GCGCATGCACGATGTTTG 58.634 55.556 19.57 0.00 42.15 2.93
198 199 2.153945 GCGCATGCACGATGTTTGG 61.154 57.895 19.57 0.00 42.15 3.28
199 200 1.501292 CGCATGCACGATGTTTGGA 59.499 52.632 19.57 0.00 34.14 3.53
200 201 0.794229 CGCATGCACGATGTTTGGAC 60.794 55.000 19.57 0.00 34.14 4.02
201 202 0.794229 GCATGCACGATGTTTGGACG 60.794 55.000 14.21 0.00 34.14 4.79
202 203 0.795698 CATGCACGATGTTTGGACGA 59.204 50.000 0.00 0.00 0.00 4.20
203 204 0.796312 ATGCACGATGTTTGGACGAC 59.204 50.000 0.00 0.00 0.00 4.34
204 205 1.129809 GCACGATGTTTGGACGACG 59.870 57.895 0.00 0.00 34.69 5.12
205 206 1.779061 CACGATGTTTGGACGACGG 59.221 57.895 0.00 0.00 33.51 4.79
206 207 2.025418 ACGATGTTTGGACGACGGC 61.025 57.895 0.00 0.00 33.51 5.68
207 208 2.024868 CGATGTTTGGACGACGGCA 61.025 57.895 1.63 0.00 0.00 5.69
208 209 1.358725 CGATGTTTGGACGACGGCAT 61.359 55.000 1.63 0.00 0.00 4.40
209 210 0.373716 GATGTTTGGACGACGGCATC 59.626 55.000 1.63 0.00 0.00 3.91
210 211 1.024579 ATGTTTGGACGACGGCATCC 61.025 55.000 1.63 0.00 35.37 3.51
211 212 1.375523 GTTTGGACGACGGCATCCT 60.376 57.895 4.35 0.00 35.86 3.24
212 213 0.953960 GTTTGGACGACGGCATCCTT 60.954 55.000 4.35 0.00 35.86 3.36
213 214 0.953471 TTTGGACGACGGCATCCTTG 60.953 55.000 4.35 0.00 35.86 3.61
214 215 1.822114 TTGGACGACGGCATCCTTGA 61.822 55.000 4.35 0.00 35.86 3.02
215 216 1.079405 GGACGACGGCATCCTTGAA 60.079 57.895 1.63 0.00 31.75 2.69
216 217 1.359459 GGACGACGGCATCCTTGAAC 61.359 60.000 1.63 0.00 31.75 3.18
217 218 1.683790 GACGACGGCATCCTTGAACG 61.684 60.000 0.00 0.00 0.00 3.95
218 219 2.452813 CGACGGCATCCTTGAACGG 61.453 63.158 0.00 0.00 0.00 4.44
219 220 1.375523 GACGGCATCCTTGAACGGT 60.376 57.895 0.00 0.00 0.00 4.83
220 221 1.635663 GACGGCATCCTTGAACGGTG 61.636 60.000 0.00 0.00 0.00 4.94
221 222 2.877691 GGCATCCTTGAACGGTGC 59.122 61.111 0.00 0.00 33.32 5.01
222 223 1.971167 GGCATCCTTGAACGGTGCA 60.971 57.895 2.10 0.00 34.73 4.57
223 224 1.503542 GCATCCTTGAACGGTGCAG 59.496 57.895 0.00 0.00 33.87 4.41
224 225 0.955428 GCATCCTTGAACGGTGCAGA 60.955 55.000 0.00 0.00 33.87 4.26
225 226 1.742761 CATCCTTGAACGGTGCAGAT 58.257 50.000 0.00 0.00 0.00 2.90
226 227 2.086869 CATCCTTGAACGGTGCAGATT 58.913 47.619 0.00 0.00 0.00 2.40
227 228 2.270352 TCCTTGAACGGTGCAGATTT 57.730 45.000 0.00 0.00 0.00 2.17
228 229 1.879380 TCCTTGAACGGTGCAGATTTG 59.121 47.619 0.00 0.00 0.00 2.32
229 230 1.608590 CCTTGAACGGTGCAGATTTGT 59.391 47.619 0.00 0.00 0.00 2.83
230 231 2.034558 CCTTGAACGGTGCAGATTTGTT 59.965 45.455 0.00 0.00 0.00 2.83
231 232 3.252215 CCTTGAACGGTGCAGATTTGTTA 59.748 43.478 0.00 0.00 0.00 2.41
232 233 4.261405 CCTTGAACGGTGCAGATTTGTTAA 60.261 41.667 0.00 0.00 0.00 2.01
233 234 4.902443 TGAACGGTGCAGATTTGTTAAA 57.098 36.364 0.00 0.00 0.00 1.52
234 235 4.602995 TGAACGGTGCAGATTTGTTAAAC 58.397 39.130 0.00 0.00 0.00 2.01
235 236 4.096532 TGAACGGTGCAGATTTGTTAAACA 59.903 37.500 0.00 0.00 0.00 2.83
236 237 4.640789 ACGGTGCAGATTTGTTAAACAA 57.359 36.364 0.00 0.00 36.11 2.83
237 238 5.195001 ACGGTGCAGATTTGTTAAACAAT 57.805 34.783 0.00 0.00 38.00 2.71
238 239 6.320494 ACGGTGCAGATTTGTTAAACAATA 57.680 33.333 0.00 0.00 38.00 1.90
239 240 6.146898 ACGGTGCAGATTTGTTAAACAATAC 58.853 36.000 0.00 0.00 38.00 1.89
240 241 6.016610 ACGGTGCAGATTTGTTAAACAATACT 60.017 34.615 0.00 0.00 38.00 2.12
241 242 7.173562 ACGGTGCAGATTTGTTAAACAATACTA 59.826 33.333 0.00 0.00 38.00 1.82
242 243 7.480542 CGGTGCAGATTTGTTAAACAATACTAC 59.519 37.037 0.00 0.00 38.00 2.73
243 244 8.512138 GGTGCAGATTTGTTAAACAATACTACT 58.488 33.333 0.00 0.00 38.00 2.57
244 245 9.543018 GTGCAGATTTGTTAAACAATACTACTC 57.457 33.333 0.00 0.00 38.00 2.59
245 246 9.278978 TGCAGATTTGTTAAACAATACTACTCA 57.721 29.630 0.00 0.00 38.00 3.41
249 250 9.537848 GATTTGTTAAACAATACTACTCAACGG 57.462 33.333 0.00 0.00 38.00 4.44
250 251 7.424227 TTGTTAAACAATACTACTCAACGGG 57.576 36.000 0.00 0.00 32.34 5.28
251 252 6.523840 TGTTAAACAATACTACTCAACGGGT 58.476 36.000 0.00 0.00 0.00 5.28
252 253 6.424509 TGTTAAACAATACTACTCAACGGGTG 59.575 38.462 0.00 0.00 0.00 4.61
253 254 2.968675 ACAATACTACTCAACGGGTGC 58.031 47.619 0.00 0.00 0.00 5.01
254 255 2.565834 ACAATACTACTCAACGGGTGCT 59.434 45.455 0.00 0.00 0.00 4.40
255 256 2.930040 CAATACTACTCAACGGGTGCTG 59.070 50.000 0.00 0.00 0.00 4.41
256 257 1.624336 TACTACTCAACGGGTGCTGT 58.376 50.000 0.00 0.00 0.00 4.40
257 258 0.756903 ACTACTCAACGGGTGCTGTT 59.243 50.000 0.00 0.00 32.65 3.16
259 260 0.466543 TACTCAACGGGTGCTGTTGT 59.533 50.000 0.00 0.00 46.97 3.32
260 261 0.814010 ACTCAACGGGTGCTGTTGTC 60.814 55.000 0.00 0.00 46.97 3.18
261 262 1.507141 CTCAACGGGTGCTGTTGTCC 61.507 60.000 0.00 0.00 46.97 4.02
262 263 1.821759 CAACGGGTGCTGTTGTCCA 60.822 57.895 0.00 0.00 43.40 4.02
263 264 1.150536 AACGGGTGCTGTTGTCCAT 59.849 52.632 0.00 0.00 31.12 3.41
264 265 0.889186 AACGGGTGCTGTTGTCCATC 60.889 55.000 0.00 0.00 31.12 3.51
265 266 2.390599 CGGGTGCTGTTGTCCATCG 61.391 63.158 0.00 0.00 0.00 3.84
266 267 1.302511 GGGTGCTGTTGTCCATCGT 60.303 57.895 0.00 0.00 0.00 3.73
267 268 1.298859 GGGTGCTGTTGTCCATCGTC 61.299 60.000 0.00 0.00 0.00 4.20
268 269 1.298859 GGTGCTGTTGTCCATCGTCC 61.299 60.000 0.00 0.00 0.00 4.79
269 270 0.602638 GTGCTGTTGTCCATCGTCCA 60.603 55.000 0.00 0.00 0.00 4.02
270 271 0.602638 TGCTGTTGTCCATCGTCCAC 60.603 55.000 0.00 0.00 0.00 4.02
271 272 0.602638 GCTGTTGTCCATCGTCCACA 60.603 55.000 0.00 0.00 0.00 4.17
272 273 1.877637 CTGTTGTCCATCGTCCACAA 58.122 50.000 0.00 0.00 0.00 3.33
273 274 2.217750 CTGTTGTCCATCGTCCACAAA 58.782 47.619 0.00 0.00 31.95 2.83
274 275 2.813754 CTGTTGTCCATCGTCCACAAAT 59.186 45.455 0.00 0.00 31.95 2.32
275 276 2.811431 TGTTGTCCATCGTCCACAAATC 59.189 45.455 0.00 0.00 31.95 2.17
276 277 1.720805 TGTCCATCGTCCACAAATCG 58.279 50.000 0.00 0.00 0.00 3.34
277 278 1.001520 TGTCCATCGTCCACAAATCGT 59.998 47.619 0.00 0.00 0.00 3.73
278 279 1.393539 GTCCATCGTCCACAAATCGTG 59.606 52.381 0.00 0.00 45.92 4.35
279 280 0.096976 CCATCGTCCACAAATCGTGC 59.903 55.000 0.00 0.00 44.91 5.34
280 281 0.795698 CATCGTCCACAAATCGTGCA 59.204 50.000 0.00 0.00 44.91 4.57
281 282 0.796312 ATCGTCCACAAATCGTGCAC 59.204 50.000 6.82 6.82 44.91 4.57
282 283 0.530870 TCGTCCACAAATCGTGCACA 60.531 50.000 18.64 4.45 44.91 4.57
283 284 0.306228 CGTCCACAAATCGTGCACAA 59.694 50.000 18.64 0.00 44.91 3.33
284 285 1.660052 CGTCCACAAATCGTGCACAAG 60.660 52.381 18.64 0.87 44.91 3.16
285 286 0.310543 TCCACAAATCGTGCACAAGC 59.689 50.000 18.64 0.00 44.91 4.01
286 287 0.311790 CCACAAATCGTGCACAAGCT 59.688 50.000 18.64 0.00 44.91 3.74
287 288 1.535028 CCACAAATCGTGCACAAGCTA 59.465 47.619 18.64 0.00 44.91 3.32
288 289 2.162208 CCACAAATCGTGCACAAGCTAT 59.838 45.455 18.64 0.00 44.91 2.97
289 290 3.419915 CACAAATCGTGCACAAGCTATC 58.580 45.455 18.64 0.00 42.74 2.08
290 291 2.094258 ACAAATCGTGCACAAGCTATCG 59.906 45.455 18.64 0.00 42.74 2.92
291 292 2.010145 AATCGTGCACAAGCTATCGT 57.990 45.000 18.64 0.00 42.74 3.73
292 293 1.560923 ATCGTGCACAAGCTATCGTC 58.439 50.000 18.64 0.00 42.74 4.20
293 294 0.526211 TCGTGCACAAGCTATCGTCT 59.474 50.000 18.64 0.00 42.74 4.18
294 295 0.642291 CGTGCACAAGCTATCGTCTG 59.358 55.000 18.64 0.00 42.74 3.51
295 296 1.714794 GTGCACAAGCTATCGTCTGT 58.285 50.000 13.17 0.00 42.74 3.41
296 297 1.391485 GTGCACAAGCTATCGTCTGTG 59.609 52.381 13.17 9.18 42.74 3.66
297 298 1.000843 TGCACAAGCTATCGTCTGTGT 59.999 47.619 13.85 0.00 42.74 3.72
298 299 2.230266 TGCACAAGCTATCGTCTGTGTA 59.770 45.455 13.85 7.98 42.74 2.90
299 300 2.854777 GCACAAGCTATCGTCTGTGTAG 59.145 50.000 13.85 0.00 37.91 2.74
300 301 2.854777 CACAAGCTATCGTCTGTGTAGC 59.145 50.000 5.91 0.00 40.79 3.58
301 302 2.492088 ACAAGCTATCGTCTGTGTAGCA 59.508 45.455 6.41 0.00 42.44 3.49
302 303 2.853731 AGCTATCGTCTGTGTAGCAC 57.146 50.000 6.41 0.00 42.44 4.40
303 304 2.370349 AGCTATCGTCTGTGTAGCACT 58.630 47.619 6.41 0.00 42.44 4.40
304 305 2.098280 AGCTATCGTCTGTGTAGCACTG 59.902 50.000 6.41 0.76 42.44 3.66
305 306 2.455032 CTATCGTCTGTGTAGCACTGC 58.545 52.381 0.00 0.00 35.11 4.40
306 307 0.891373 ATCGTCTGTGTAGCACTGCT 59.109 50.000 8.95 8.95 43.41 4.24
307 308 0.673985 TCGTCTGTGTAGCACTGCTT 59.326 50.000 9.30 0.00 40.44 3.91
308 309 1.068588 TCGTCTGTGTAGCACTGCTTT 59.931 47.619 9.30 0.00 40.44 3.51
309 310 1.867233 CGTCTGTGTAGCACTGCTTTT 59.133 47.619 9.30 0.00 40.44 2.27
313 314 5.385617 GTCTGTGTAGCACTGCTTTTATTG 58.614 41.667 9.30 0.00 40.44 1.90
342 343 6.088824 GCTATGCATGGAATAGTACATTTGC 58.911 40.000 15.09 0.00 31.43 3.68
365 366 8.583810 TGCATTCTTATATGTACTACGAAACC 57.416 34.615 0.00 0.00 0.00 3.27
382 385 9.511144 CTACGAAACCTTTCTTTTTACATGTTT 57.489 29.630 2.30 0.00 35.07 2.83
412 415 7.719871 ATGAACCTGTGAGTACAATACTACT 57.280 36.000 0.00 0.00 39.59 2.57
413 416 8.818622 ATGAACCTGTGAGTACAATACTACTA 57.181 34.615 0.00 0.00 39.59 1.82
644 652 1.519719 GGCAGCTCGTCTCCATCTT 59.480 57.895 0.00 0.00 0.00 2.40
652 660 1.531578 TCGTCTCCATCTTATCTCGCG 59.468 52.381 0.00 0.00 0.00 5.87
709 717 1.067142 GCACACGGAGATCCTACACAA 60.067 52.381 0.00 0.00 0.00 3.33
720 728 0.944386 CCTACACAACAAGTTGCGCT 59.056 50.000 9.73 0.00 44.03 5.92
824 838 0.028770 CTCTCGTAGCCTTGCTCTCG 59.971 60.000 0.00 0.00 40.44 4.04
924 946 9.128107 GTTGATTAAAAAGCTTCAATCATTCGA 57.872 29.630 21.94 11.29 37.28 3.71
985 1008 7.816945 TCTTTTCTTCTGTTTTCTTTGCTTG 57.183 32.000 0.00 0.00 0.00 4.01
1003 1031 3.057033 GCTTGCCATCCATCCATTCATAC 60.057 47.826 0.00 0.00 0.00 2.39
1007 1035 5.503002 TGCCATCCATCCATTCATACATAG 58.497 41.667 0.00 0.00 0.00 2.23
1008 1036 4.885907 GCCATCCATCCATTCATACATAGG 59.114 45.833 0.00 0.00 0.00 2.57
1009 1037 5.443283 CCATCCATCCATTCATACATAGGG 58.557 45.833 0.00 0.00 0.00 3.53
1010 1038 5.192321 CCATCCATCCATTCATACATAGGGA 59.808 44.000 0.00 0.00 0.00 4.20
1011 1039 6.297185 CCATCCATCCATTCATACATAGGGAA 60.297 42.308 0.00 0.00 0.00 3.97
1054 1082 3.447586 ACTCGCTAGCTAGTTGATTCCAA 59.552 43.478 21.62 0.00 0.00 3.53
1060 1088 5.825151 GCTAGCTAGTTGATTCCAATTTCCT 59.175 40.000 21.62 0.00 34.39 3.36
1063 1095 5.884792 AGCTAGTTGATTCCAATTTCCTGAG 59.115 40.000 0.00 0.00 34.39 3.35
1258 1290 2.847234 ACTCCAACCGCTCCACCA 60.847 61.111 0.00 0.00 0.00 4.17
1578 1616 2.593956 GGGGAGGACGCTGAAAGGT 61.594 63.158 0.00 0.00 0.00 3.50
1623 1661 2.358737 GTCTGGAGCAACACCGGG 60.359 66.667 6.32 0.00 34.80 5.73
1640 1678 1.530323 GGGTTCTTCGGCTAAGCAAA 58.470 50.000 0.00 0.00 34.97 3.68
1641 1679 1.468914 GGGTTCTTCGGCTAAGCAAAG 59.531 52.381 0.00 0.00 34.97 2.77
1642 1680 1.135660 GGTTCTTCGGCTAAGCAAAGC 60.136 52.381 1.86 1.86 41.99 3.51
1644 1682 1.890876 TCTTCGGCTAAGCAAAGCAA 58.109 45.000 11.81 0.00 44.64 3.91
1645 1683 1.806542 TCTTCGGCTAAGCAAAGCAAG 59.193 47.619 11.81 7.95 44.64 4.01
1647 1685 0.888736 TCGGCTAAGCAAAGCAAGCA 60.889 50.000 11.81 0.00 44.64 3.91
1648 1686 0.455633 CGGCTAAGCAAAGCAAGCAG 60.456 55.000 11.81 9.38 44.64 4.24
1651 1689 1.000938 GCTAAGCAAAGCAAGCAGTGT 60.001 47.619 5.51 0.00 42.30 3.55
1655 1693 0.039165 GCAAAGCAAGCAGTGTACCC 60.039 55.000 0.00 0.00 0.00 3.69
1676 1727 0.101399 ATCATCGTCTCGTGTCAGCC 59.899 55.000 0.00 0.00 0.00 4.85
1945 2029 3.507786 CCGATATCGTCAGTTTGTCACA 58.492 45.455 22.81 0.00 37.74 3.58
1946 2030 3.924073 CCGATATCGTCAGTTTGTCACAA 59.076 43.478 22.81 0.00 37.74 3.33
1962 2046 4.642885 TGTCACAAAACTTCTCCGGAAAAT 59.357 37.500 5.23 0.00 0.00 1.82
1965 2049 7.013846 TGTCACAAAACTTCTCCGGAAAATAAT 59.986 33.333 5.23 0.00 0.00 1.28
1966 2050 8.508875 GTCACAAAACTTCTCCGGAAAATAATA 58.491 33.333 5.23 0.00 0.00 0.98
1967 2051 9.069082 TCACAAAACTTCTCCGGAAAATAATAA 57.931 29.630 5.23 0.00 0.00 1.40
2020 2104 1.029408 TGTTGGCGTATGCATGGTCC 61.029 55.000 10.16 7.68 45.35 4.46
2032 2116 1.400494 GCATGGTCCGTTGGATTACAC 59.600 52.381 0.00 0.00 32.73 2.90
2033 2117 2.939640 GCATGGTCCGTTGGATTACACT 60.940 50.000 0.00 0.00 32.73 3.55
2036 2120 2.028476 TGGTCCGTTGGATTACACTCTG 60.028 50.000 0.00 0.00 32.73 3.35
2050 2134 3.545703 ACACTCTGACTGTTTTCCTTGG 58.454 45.455 0.00 0.00 0.00 3.61
2051 2135 2.880890 CACTCTGACTGTTTTCCTTGGG 59.119 50.000 0.00 0.00 0.00 4.12
2092 2176 4.457466 TGTATACACGCACTAGAGATGGA 58.543 43.478 0.08 0.00 0.00 3.41
2094 2178 1.840737 ACACGCACTAGAGATGGACT 58.159 50.000 0.00 0.00 0.00 3.85
2095 2179 3.000684 ACACGCACTAGAGATGGACTA 57.999 47.619 0.00 0.00 0.00 2.59
2096 2180 2.946329 ACACGCACTAGAGATGGACTAG 59.054 50.000 0.00 0.00 41.87 2.57
2102 2186 2.955660 ACTAGAGATGGACTAGTGCAGC 59.044 50.000 23.28 23.28 45.59 5.25
2103 2187 0.743688 AGAGATGGACTAGTGCAGCG 59.256 55.000 24.13 0.00 42.22 5.18
2104 2188 0.249238 GAGATGGACTAGTGCAGCGG 60.249 60.000 24.13 0.00 42.22 5.52
2105 2189 0.684479 AGATGGACTAGTGCAGCGGA 60.684 55.000 24.13 0.29 42.22 5.54
2106 2190 0.249238 GATGGACTAGTGCAGCGGAG 60.249 60.000 22.09 0.00 33.50 4.63
2110 2194 0.248702 GACTAGTGCAGCGGAGTAGC 60.249 60.000 0.00 0.00 37.41 3.58
2118 2202 2.279318 GCGGAGTAGCTTACGGGC 60.279 66.667 0.00 0.00 0.00 6.13
2131 2215 4.728102 CGGGCACGTACGCTCCAA 62.728 66.667 22.56 0.00 34.81 3.53
2132 2216 2.357760 GGGCACGTACGCTCCAAA 60.358 61.111 22.56 0.00 0.00 3.28
2133 2217 1.962306 GGGCACGTACGCTCCAAAA 60.962 57.895 22.56 0.00 0.00 2.44
2134 2218 1.205820 GGCACGTACGCTCCAAAAC 59.794 57.895 16.72 0.00 0.00 2.43
2135 2219 1.500512 GGCACGTACGCTCCAAAACA 61.501 55.000 16.72 0.00 0.00 2.83
2136 2220 0.110823 GCACGTACGCTCCAAAACAG 60.111 55.000 16.72 0.00 0.00 3.16
2137 2221 1.493772 CACGTACGCTCCAAAACAGA 58.506 50.000 16.72 0.00 0.00 3.41
2138 2222 1.862201 CACGTACGCTCCAAAACAGAA 59.138 47.619 16.72 0.00 0.00 3.02
2139 2223 2.285756 CACGTACGCTCCAAAACAGAAA 59.714 45.455 16.72 0.00 0.00 2.52
2140 2224 2.542595 ACGTACGCTCCAAAACAGAAAG 59.457 45.455 16.72 0.00 0.00 2.62
2141 2225 2.798283 CGTACGCTCCAAAACAGAAAGA 59.202 45.455 0.52 0.00 0.00 2.52
2142 2226 3.120991 CGTACGCTCCAAAACAGAAAGAG 60.121 47.826 0.52 0.00 0.00 2.85
2143 2227 1.604278 ACGCTCCAAAACAGAAAGAGC 59.396 47.619 0.00 0.00 45.10 4.09
2147 2231 4.220533 CTCCAAAACAGAAAGAGCACTG 57.779 45.455 0.00 0.00 39.65 3.66
2148 2232 2.358898 TCCAAAACAGAAAGAGCACTGC 59.641 45.455 0.00 0.00 37.61 4.40
2149 2233 2.360165 CCAAAACAGAAAGAGCACTGCT 59.640 45.455 2.22 2.22 43.88 4.24
2150 2234 3.565482 CCAAAACAGAAAGAGCACTGCTA 59.435 43.478 2.71 0.00 39.88 3.49
2151 2235 4.217118 CCAAAACAGAAAGAGCACTGCTAT 59.783 41.667 2.71 0.00 39.88 2.97
2152 2236 5.412594 CCAAAACAGAAAGAGCACTGCTATA 59.587 40.000 2.71 0.00 39.88 1.31
2153 2237 6.310197 CAAAACAGAAAGAGCACTGCTATAC 58.690 40.000 2.71 0.00 39.88 1.47
2154 2238 4.808414 ACAGAAAGAGCACTGCTATACA 57.192 40.909 2.71 0.00 39.88 2.29
2155 2239 4.499183 ACAGAAAGAGCACTGCTATACAC 58.501 43.478 2.71 0.00 39.88 2.90
2156 2240 4.021104 ACAGAAAGAGCACTGCTATACACA 60.021 41.667 2.71 0.00 39.88 3.72
2157 2241 4.328440 CAGAAAGAGCACTGCTATACACAC 59.672 45.833 2.71 0.00 39.88 3.82
2158 2242 2.568696 AGAGCACTGCTATACACACG 57.431 50.000 2.71 0.00 39.88 4.49
2159 2243 2.092323 AGAGCACTGCTATACACACGA 58.908 47.619 2.71 0.00 39.88 4.35
2160 2244 2.159366 AGAGCACTGCTATACACACGAC 60.159 50.000 2.71 0.00 39.88 4.34
2161 2245 0.914551 GCACTGCTATACACACGACG 59.085 55.000 0.00 0.00 0.00 5.12
2162 2246 1.545759 CACTGCTATACACACGACGG 58.454 55.000 0.00 0.00 0.00 4.79
2163 2247 1.131693 CACTGCTATACACACGACGGA 59.868 52.381 0.00 0.00 0.00 4.69
2164 2248 2.022195 ACTGCTATACACACGACGGAT 58.978 47.619 0.00 0.00 0.00 4.18
2165 2249 2.223502 ACTGCTATACACACGACGGATG 60.224 50.000 0.00 0.00 0.00 3.51
2166 2250 1.066454 TGCTATACACACGACGGATGG 59.934 52.381 0.00 0.00 0.00 3.51
2167 2251 1.335810 GCTATACACACGACGGATGGA 59.664 52.381 0.00 0.00 0.00 3.41
2168 2252 2.857489 GCTATACACACGACGGATGGAC 60.857 54.545 0.00 0.00 0.00 4.02
2169 2253 0.099968 ATACACACGACGGATGGACG 59.900 55.000 0.00 0.00 40.31 4.79
2170 2254 2.531927 TACACACGACGGATGGACGC 62.532 60.000 0.00 0.00 37.37 5.19
2171 2255 3.676605 ACACGACGGATGGACGCA 61.677 61.111 0.00 0.00 37.37 5.24
2172 2256 3.179265 CACGACGGATGGACGCAC 61.179 66.667 0.00 0.00 37.37 5.34
2173 2257 4.771356 ACGACGGATGGACGCACG 62.771 66.667 0.00 0.00 40.62 5.34
2174 2258 4.470170 CGACGGATGGACGCACGA 62.470 66.667 0.00 0.00 38.49 4.35
2175 2259 2.879462 GACGGATGGACGCACGAC 60.879 66.667 0.00 0.00 37.37 4.34
2176 2260 4.430765 ACGGATGGACGCACGACC 62.431 66.667 4.58 4.58 37.37 4.79
2178 2262 4.077184 GGATGGACGCACGACCCA 62.077 66.667 8.97 9.68 0.00 4.51
2179 2263 2.813908 GATGGACGCACGACCCAC 60.814 66.667 8.97 0.13 32.07 4.61
2180 2264 3.583276 GATGGACGCACGACCCACA 62.583 63.158 8.97 0.00 32.07 4.17
2181 2265 3.589654 ATGGACGCACGACCCACAG 62.590 63.158 8.97 0.00 32.07 3.66
2182 2266 3.986006 GGACGCACGACCCACAGA 61.986 66.667 0.00 0.00 0.00 3.41
2183 2267 2.733593 GACGCACGACCCACAGAC 60.734 66.667 0.00 0.00 0.00 3.51
2184 2268 4.640855 ACGCACGACCCACAGACG 62.641 66.667 0.00 0.00 0.00 4.18
2185 2269 4.337060 CGCACGACCCACAGACGA 62.337 66.667 0.00 0.00 0.00 4.20
2186 2270 2.733593 GCACGACCCACAGACGAC 60.734 66.667 0.00 0.00 0.00 4.34
2187 2271 2.725641 CACGACCCACAGACGACA 59.274 61.111 0.00 0.00 0.00 4.35
2188 2272 1.066752 CACGACCCACAGACGACAA 59.933 57.895 0.00 0.00 0.00 3.18
2189 2273 0.939577 CACGACCCACAGACGACAAG 60.940 60.000 0.00 0.00 0.00 3.16
2190 2274 1.362717 CGACCCACAGACGACAAGT 59.637 57.895 0.00 0.00 0.00 3.16
2220 2304 3.277142 CGTAGGATTAGCTGGGGTTTT 57.723 47.619 0.00 0.00 0.00 2.43
2221 2305 3.617284 CGTAGGATTAGCTGGGGTTTTT 58.383 45.455 0.00 0.00 0.00 1.94
2222 2306 4.773013 CGTAGGATTAGCTGGGGTTTTTA 58.227 43.478 0.00 0.00 0.00 1.52
2223 2307 5.187687 CGTAGGATTAGCTGGGGTTTTTAA 58.812 41.667 0.00 0.00 0.00 1.52
2224 2308 5.826208 CGTAGGATTAGCTGGGGTTTTTAAT 59.174 40.000 0.00 0.00 0.00 1.40
2225 2309 6.017357 CGTAGGATTAGCTGGGGTTTTTAATC 60.017 42.308 0.00 0.00 32.57 1.75
2226 2310 6.092346 AGGATTAGCTGGGGTTTTTAATCT 57.908 37.500 0.00 0.00 33.42 2.40
2227 2311 5.893824 AGGATTAGCTGGGGTTTTTAATCTG 59.106 40.000 0.00 0.00 33.42 2.90
2228 2312 5.656859 GGATTAGCTGGGGTTTTTAATCTGT 59.343 40.000 0.00 0.00 33.42 3.41
2229 2313 5.975693 TTAGCTGGGGTTTTTAATCTGTG 57.024 39.130 0.00 0.00 0.00 3.66
2230 2314 3.844640 AGCTGGGGTTTTTAATCTGTGT 58.155 40.909 0.00 0.00 0.00 3.72
2231 2315 3.573967 AGCTGGGGTTTTTAATCTGTGTG 59.426 43.478 0.00 0.00 0.00 3.82
2232 2316 3.306019 GCTGGGGTTTTTAATCTGTGTGG 60.306 47.826 0.00 0.00 0.00 4.17
2233 2317 2.630580 TGGGGTTTTTAATCTGTGTGGC 59.369 45.455 0.00 0.00 0.00 5.01
2234 2318 2.897326 GGGGTTTTTAATCTGTGTGGCT 59.103 45.455 0.00 0.00 0.00 4.75
2235 2319 3.056821 GGGGTTTTTAATCTGTGTGGCTC 60.057 47.826 0.00 0.00 0.00 4.70
2236 2320 3.056821 GGGTTTTTAATCTGTGTGGCTCC 60.057 47.826 0.00 0.00 0.00 4.70
2237 2321 3.826729 GGTTTTTAATCTGTGTGGCTCCT 59.173 43.478 0.00 0.00 0.00 3.69
2238 2322 4.321230 GGTTTTTAATCTGTGTGGCTCCTG 60.321 45.833 0.00 0.00 0.00 3.86
2239 2323 2.113860 TTAATCTGTGTGGCTCCTGC 57.886 50.000 0.00 0.00 38.76 4.85
2240 2324 1.279496 TAATCTGTGTGGCTCCTGCT 58.721 50.000 0.00 0.00 39.59 4.24
2241 2325 0.403271 AATCTGTGTGGCTCCTGCTT 59.597 50.000 0.00 0.00 39.59 3.91
2242 2326 0.035630 ATCTGTGTGGCTCCTGCTTC 60.036 55.000 0.00 0.00 39.59 3.86
2243 2327 1.673665 CTGTGTGGCTCCTGCTTCC 60.674 63.158 0.00 0.00 39.59 3.46
2244 2328 2.743928 GTGTGGCTCCTGCTTCCG 60.744 66.667 0.00 0.00 39.59 4.30
2245 2329 3.241530 TGTGGCTCCTGCTTCCGT 61.242 61.111 0.00 0.00 39.59 4.69
2246 2330 2.435059 GTGGCTCCTGCTTCCGTC 60.435 66.667 0.00 0.00 39.59 4.79
2247 2331 4.069232 TGGCTCCTGCTTCCGTCG 62.069 66.667 0.00 0.00 39.59 5.12
2248 2332 4.821589 GGCTCCTGCTTCCGTCGG 62.822 72.222 4.39 4.39 39.59 4.79
2249 2333 4.821589 GCTCCTGCTTCCGTCGGG 62.822 72.222 12.29 0.00 36.03 5.14
2250 2334 4.821589 CTCCTGCTTCCGTCGGGC 62.822 72.222 12.29 8.58 0.00 6.13
2253 2337 4.680237 CTGCTTCCGTCGGGCACA 62.680 66.667 12.29 6.16 32.33 4.57
2254 2338 4.980805 TGCTTCCGTCGGGCACAC 62.981 66.667 12.29 0.00 0.00 3.82
2255 2339 4.980805 GCTTCCGTCGGGCACACA 62.981 66.667 12.29 0.00 0.00 3.72
2256 2340 2.047274 CTTCCGTCGGGCACACAT 60.047 61.111 12.29 0.00 0.00 3.21
2257 2341 2.047655 TTCCGTCGGGCACACATC 60.048 61.111 12.29 0.00 0.00 3.06
2258 2342 3.925362 TTCCGTCGGGCACACATCG 62.925 63.158 12.29 0.00 0.00 3.84
2259 2343 4.735132 CCGTCGGGCACACATCGT 62.735 66.667 2.34 0.00 0.00 3.73
2260 2344 3.179265 CGTCGGGCACACATCGTC 61.179 66.667 0.00 0.00 0.00 4.20
2261 2345 2.813908 GTCGGGCACACATCGTCC 60.814 66.667 0.00 0.00 0.00 4.79
2262 2346 3.307108 TCGGGCACACATCGTCCA 61.307 61.111 0.00 0.00 0.00 4.02
2263 2347 2.815211 CGGGCACACATCGTCCAG 60.815 66.667 0.00 0.00 0.00 3.86
2264 2348 3.127533 GGGCACACATCGTCCAGC 61.128 66.667 0.00 0.00 0.00 4.85
2265 2349 2.358615 GGCACACATCGTCCAGCA 60.359 61.111 0.00 0.00 0.00 4.41
2266 2350 2.393768 GGCACACATCGTCCAGCAG 61.394 63.158 0.00 0.00 0.00 4.24
2267 2351 1.669115 GCACACATCGTCCAGCAGT 60.669 57.895 0.00 0.00 0.00 4.40
2268 2352 1.630244 GCACACATCGTCCAGCAGTC 61.630 60.000 0.00 0.00 0.00 3.51
2269 2353 0.319813 CACACATCGTCCAGCAGTCA 60.320 55.000 0.00 0.00 0.00 3.41
2270 2354 0.392706 ACACATCGTCCAGCAGTCAA 59.607 50.000 0.00 0.00 0.00 3.18
2271 2355 1.002430 ACACATCGTCCAGCAGTCAAT 59.998 47.619 0.00 0.00 0.00 2.57
2272 2356 1.662629 CACATCGTCCAGCAGTCAATC 59.337 52.381 0.00 0.00 0.00 2.67
2273 2357 0.926155 CATCGTCCAGCAGTCAATCG 59.074 55.000 0.00 0.00 0.00 3.34
2274 2358 0.532573 ATCGTCCAGCAGTCAATCGT 59.467 50.000 0.00 0.00 0.00 3.73
2275 2359 0.388520 TCGTCCAGCAGTCAATCGTG 60.389 55.000 0.00 0.00 0.00 4.35
2276 2360 0.667487 CGTCCAGCAGTCAATCGTGT 60.667 55.000 0.00 0.00 0.00 4.49
2277 2361 0.792640 GTCCAGCAGTCAATCGTGTG 59.207 55.000 0.00 0.00 0.00 3.82
2278 2362 0.950555 TCCAGCAGTCAATCGTGTGC 60.951 55.000 0.00 0.00 36.10 4.57
2279 2363 1.229975 CCAGCAGTCAATCGTGTGCA 61.230 55.000 0.00 0.00 38.44 4.57
2280 2364 0.165295 CAGCAGTCAATCGTGTGCAG 59.835 55.000 0.00 0.00 38.44 4.41
2281 2365 0.033920 AGCAGTCAATCGTGTGCAGA 59.966 50.000 0.00 0.00 38.44 4.26
2282 2366 0.441533 GCAGTCAATCGTGTGCAGAG 59.558 55.000 0.00 0.00 35.91 3.35
2283 2367 0.441533 CAGTCAATCGTGTGCAGAGC 59.558 55.000 0.00 0.00 0.00 4.09
2284 2368 0.033920 AGTCAATCGTGTGCAGAGCA 59.966 50.000 0.00 0.00 35.60 4.26
2330 2414 4.332819 GCGAATTAACCTGCATCAAGTAGT 59.667 41.667 0.00 0.00 0.00 2.73
2346 2442 1.422950 TAGTAATTGGCCGCGCGAAC 61.423 55.000 34.63 23.53 0.00 3.95
2413 3529 1.495584 TTGTGAAGTGAAGGACGCGC 61.496 55.000 5.73 0.00 0.00 6.86
2531 3662 3.390175 AGCTGATAGAGTGGTACTGGT 57.610 47.619 0.00 0.00 0.00 4.00
2532 3663 3.027412 AGCTGATAGAGTGGTACTGGTG 58.973 50.000 0.00 0.00 0.00 4.17
2574 3852 6.017192 AGGAATAGTTACACAGTGAAGGAGA 58.983 40.000 7.81 0.00 0.00 3.71
2749 4038 4.322385 GACGTGCACCCGCCAAAC 62.322 66.667 12.15 0.00 37.32 2.93
2770 4059 0.747644 CTCCAGCAACCACACACACA 60.748 55.000 0.00 0.00 0.00 3.72
2771 4060 1.029408 TCCAGCAACCACACACACAC 61.029 55.000 0.00 0.00 0.00 3.82
2772 4061 1.433064 CAGCAACCACACACACACC 59.567 57.895 0.00 0.00 0.00 4.16
2773 4062 1.001517 AGCAACCACACACACACCA 60.002 52.632 0.00 0.00 0.00 4.17
2774 4063 1.138671 GCAACCACACACACACCAC 59.861 57.895 0.00 0.00 0.00 4.16
2775 4064 1.590610 GCAACCACACACACACCACA 61.591 55.000 0.00 0.00 0.00 4.17
2776 4065 0.170116 CAACCACACACACACCACAC 59.830 55.000 0.00 0.00 0.00 3.82
2777 4066 1.302383 AACCACACACACACCACACG 61.302 55.000 0.00 0.00 0.00 4.49
2778 4067 2.468670 CCACACACACACCACACGG 61.469 63.158 0.00 0.00 38.77 4.94
2779 4068 2.124901 ACACACACACCACACGGG 60.125 61.111 0.00 0.00 44.81 5.28
2789 4078 2.263153 CCACACGGGTTGGAAATCC 58.737 57.895 0.00 0.00 46.23 3.01
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
5 6 7.767198 CGGAGGGAGTAGTACAAATATGAAAAA 59.233 37.037 2.52 0.00 0.00 1.94
6 7 7.270047 CGGAGGGAGTAGTACAAATATGAAAA 58.730 38.462 2.52 0.00 0.00 2.29
7 8 6.684613 GCGGAGGGAGTAGTACAAATATGAAA 60.685 42.308 2.52 0.00 0.00 2.69
8 9 5.221382 GCGGAGGGAGTAGTACAAATATGAA 60.221 44.000 2.52 0.00 0.00 2.57
9 10 4.280174 GCGGAGGGAGTAGTACAAATATGA 59.720 45.833 2.52 0.00 0.00 2.15
10 11 4.557205 GCGGAGGGAGTAGTACAAATATG 58.443 47.826 2.52 0.00 0.00 1.78
11 12 3.577415 GGCGGAGGGAGTAGTACAAATAT 59.423 47.826 2.52 0.00 0.00 1.28
12 13 2.961062 GGCGGAGGGAGTAGTACAAATA 59.039 50.000 2.52 0.00 0.00 1.40
13 14 1.761198 GGCGGAGGGAGTAGTACAAAT 59.239 52.381 2.52 0.00 0.00 2.32
14 15 1.188863 GGCGGAGGGAGTAGTACAAA 58.811 55.000 2.52 0.00 0.00 2.83
15 16 0.685458 GGGCGGAGGGAGTAGTACAA 60.685 60.000 2.52 0.00 0.00 2.41
16 17 1.076485 GGGCGGAGGGAGTAGTACA 60.076 63.158 2.52 0.00 0.00 2.90
17 18 2.192187 CGGGCGGAGGGAGTAGTAC 61.192 68.421 0.00 0.00 0.00 2.73
18 19 2.194056 CGGGCGGAGGGAGTAGTA 59.806 66.667 0.00 0.00 0.00 1.82
19 20 4.835891 CCGGGCGGAGGGAGTAGT 62.836 72.222 0.00 0.00 37.50 2.73
20 21 4.517934 TCCGGGCGGAGGGAGTAG 62.518 72.222 0.00 0.00 39.76 2.57
21 22 2.884179 ATTTCCGGGCGGAGGGAGTA 62.884 60.000 0.00 0.00 46.06 2.59
22 23 2.884179 TATTTCCGGGCGGAGGGAGT 62.884 60.000 0.00 0.00 46.06 3.85
23 24 2.138179 TATTTCCGGGCGGAGGGAG 61.138 63.158 0.00 0.00 46.06 4.30
24 25 2.041715 TATTTCCGGGCGGAGGGA 60.042 61.111 0.00 0.00 46.06 4.20
25 26 1.979619 AAGTATTTCCGGGCGGAGGG 61.980 60.000 0.00 0.00 46.06 4.30
26 27 0.754472 TAAGTATTTCCGGGCGGAGG 59.246 55.000 0.00 0.00 46.06 4.30
27 28 2.036733 TGATAAGTATTTCCGGGCGGAG 59.963 50.000 0.00 0.00 46.06 4.63
28 29 2.040939 TGATAAGTATTTCCGGGCGGA 58.959 47.619 0.00 0.00 43.52 5.54
29 30 2.536761 TGATAAGTATTTCCGGGCGG 57.463 50.000 0.00 0.00 0.00 6.13
30 31 3.659786 TGATGATAAGTATTTCCGGGCG 58.340 45.455 0.00 0.00 0.00 6.13
31 32 6.385649 TTTTGATGATAAGTATTTCCGGGC 57.614 37.500 0.00 0.00 0.00 6.13
32 33 8.165239 TCATTTTGATGATAAGTATTTCCGGG 57.835 34.615 0.00 0.00 0.00 5.73
117 118 9.280174 TCTCTCCGTTTAAAAATACTTGTCATT 57.720 29.630 0.00 0.00 0.00 2.57
118 119 8.842358 TCTCTCCGTTTAAAAATACTTGTCAT 57.158 30.769 0.00 0.00 0.00 3.06
119 120 7.929785 ACTCTCTCCGTTTAAAAATACTTGTCA 59.070 33.333 0.00 0.00 0.00 3.58
120 121 8.307921 ACTCTCTCCGTTTAAAAATACTTGTC 57.692 34.615 0.00 0.00 0.00 3.18
121 122 9.201127 GTACTCTCTCCGTTTAAAAATACTTGT 57.799 33.333 0.00 0.00 0.00 3.16
122 123 9.199982 TGTACTCTCTCCGTTTAAAAATACTTG 57.800 33.333 0.00 0.00 0.00 3.16
123 124 9.939802 ATGTACTCTCTCCGTTTAAAAATACTT 57.060 29.630 0.00 0.00 0.00 2.24
124 125 9.939802 AATGTACTCTCTCCGTTTAAAAATACT 57.060 29.630 0.00 0.00 0.00 2.12
129 130 9.158233 CCAATAATGTACTCTCTCCGTTTAAAA 57.842 33.333 0.00 0.00 0.00 1.52
130 131 7.279313 GCCAATAATGTACTCTCTCCGTTTAAA 59.721 37.037 0.00 0.00 0.00 1.52
131 132 6.759827 GCCAATAATGTACTCTCTCCGTTTAA 59.240 38.462 0.00 0.00 0.00 1.52
132 133 6.097839 AGCCAATAATGTACTCTCTCCGTTTA 59.902 38.462 0.00 0.00 0.00 2.01
133 134 5.104900 AGCCAATAATGTACTCTCTCCGTTT 60.105 40.000 0.00 0.00 0.00 3.60
134 135 4.406003 AGCCAATAATGTACTCTCTCCGTT 59.594 41.667 0.00 0.00 0.00 4.44
135 136 3.961408 AGCCAATAATGTACTCTCTCCGT 59.039 43.478 0.00 0.00 0.00 4.69
136 137 4.551388 GAGCCAATAATGTACTCTCTCCG 58.449 47.826 0.00 0.00 0.00 4.63
137 138 4.278669 TCGAGCCAATAATGTACTCTCTCC 59.721 45.833 0.00 0.00 0.00 3.71
138 139 5.440234 TCGAGCCAATAATGTACTCTCTC 57.560 43.478 0.00 0.00 0.00 3.20
139 140 5.854010 TTCGAGCCAATAATGTACTCTCT 57.146 39.130 0.00 0.00 0.00 3.10
140 141 6.043411 AGTTTCGAGCCAATAATGTACTCTC 58.957 40.000 0.00 0.00 0.00 3.20
141 142 5.978814 AGTTTCGAGCCAATAATGTACTCT 58.021 37.500 0.00 0.00 0.00 3.24
142 143 7.948278 ATAGTTTCGAGCCAATAATGTACTC 57.052 36.000 0.00 0.00 0.00 2.59
143 144 8.204836 AGAATAGTTTCGAGCCAATAATGTACT 58.795 33.333 0.00 0.00 36.93 2.73
144 145 8.366671 AGAATAGTTTCGAGCCAATAATGTAC 57.633 34.615 0.00 0.00 36.93 2.90
145 146 9.472361 GTAGAATAGTTTCGAGCCAATAATGTA 57.528 33.333 0.00 0.00 36.93 2.29
146 147 7.985184 TGTAGAATAGTTTCGAGCCAATAATGT 59.015 33.333 0.00 0.00 36.93 2.71
147 148 8.276325 GTGTAGAATAGTTTCGAGCCAATAATG 58.724 37.037 0.00 0.00 36.93 1.90
148 149 7.985184 TGTGTAGAATAGTTTCGAGCCAATAAT 59.015 33.333 0.00 0.00 36.93 1.28
149 150 7.277098 GTGTGTAGAATAGTTTCGAGCCAATAA 59.723 37.037 0.00 0.00 36.93 1.40
150 151 6.755141 GTGTGTAGAATAGTTTCGAGCCAATA 59.245 38.462 0.00 0.00 36.93 1.90
151 152 5.581085 GTGTGTAGAATAGTTTCGAGCCAAT 59.419 40.000 0.00 0.00 36.93 3.16
152 153 4.927425 GTGTGTAGAATAGTTTCGAGCCAA 59.073 41.667 0.00 0.00 36.93 4.52
153 154 4.491676 GTGTGTAGAATAGTTTCGAGCCA 58.508 43.478 0.00 0.00 36.93 4.75
154 155 3.546670 CGTGTGTAGAATAGTTTCGAGCC 59.453 47.826 0.00 0.00 36.93 4.70
155 156 4.262510 GTCGTGTGTAGAATAGTTTCGAGC 59.737 45.833 0.00 0.00 36.93 5.03
156 157 5.508573 CAGTCGTGTGTAGAATAGTTTCGAG 59.491 44.000 0.00 0.00 36.93 4.04
157 158 5.388111 CAGTCGTGTGTAGAATAGTTTCGA 58.612 41.667 0.00 0.00 36.93 3.71
158 159 4.030306 GCAGTCGTGTGTAGAATAGTTTCG 59.970 45.833 0.00 0.00 36.93 3.46
159 160 4.030306 CGCAGTCGTGTGTAGAATAGTTTC 59.970 45.833 0.00 0.00 0.00 2.78
160 161 3.918591 CGCAGTCGTGTGTAGAATAGTTT 59.081 43.478 0.00 0.00 0.00 2.66
161 162 3.499048 CGCAGTCGTGTGTAGAATAGTT 58.501 45.455 0.00 0.00 0.00 2.24
162 163 2.731341 GCGCAGTCGTGTGTAGAATAGT 60.731 50.000 0.30 0.00 36.48 2.12
163 164 1.846782 GCGCAGTCGTGTGTAGAATAG 59.153 52.381 0.30 0.00 36.48 1.73
164 165 1.200484 TGCGCAGTCGTGTGTAGAATA 59.800 47.619 5.66 0.00 36.48 1.75
165 166 0.038618 TGCGCAGTCGTGTGTAGAAT 60.039 50.000 5.66 0.00 36.48 2.40
166 167 0.038618 ATGCGCAGTCGTGTGTAGAA 60.039 50.000 18.32 0.00 36.48 2.10
167 168 0.732538 CATGCGCAGTCGTGTGTAGA 60.733 55.000 18.32 0.00 36.48 2.59
168 169 1.704010 CATGCGCAGTCGTGTGTAG 59.296 57.895 18.32 0.00 36.48 2.74
169 170 2.379634 GCATGCGCAGTCGTGTGTA 61.380 57.895 18.32 0.00 38.36 2.90
170 171 3.716006 GCATGCGCAGTCGTGTGT 61.716 61.111 18.32 0.00 38.36 3.72
171 172 3.714963 TGCATGCGCAGTCGTGTG 61.715 61.111 18.32 9.39 45.36 3.82
180 181 2.153945 CCAAACATCGTGCATGCGC 61.154 57.895 21.37 21.37 35.65 6.09
181 182 0.794229 GTCCAAACATCGTGCATGCG 60.794 55.000 14.09 0.00 35.65 4.73
182 183 0.794229 CGTCCAAACATCGTGCATGC 60.794 55.000 11.82 11.82 35.65 4.06
183 184 0.795698 TCGTCCAAACATCGTGCATG 59.204 50.000 0.00 0.00 38.64 4.06
184 185 0.796312 GTCGTCCAAACATCGTGCAT 59.204 50.000 0.00 0.00 0.00 3.96
185 186 1.553195 CGTCGTCCAAACATCGTGCA 61.553 55.000 0.00 0.00 0.00 4.57
186 187 1.129809 CGTCGTCCAAACATCGTGC 59.870 57.895 0.00 0.00 0.00 5.34
187 188 1.779061 CCGTCGTCCAAACATCGTG 59.221 57.895 0.00 0.00 0.00 4.35
188 189 2.025418 GCCGTCGTCCAAACATCGT 61.025 57.895 0.00 0.00 0.00 3.73
189 190 1.358725 ATGCCGTCGTCCAAACATCG 61.359 55.000 0.00 0.00 0.00 3.84
190 191 0.373716 GATGCCGTCGTCCAAACATC 59.626 55.000 0.00 0.00 0.00 3.06
191 192 1.024579 GGATGCCGTCGTCCAAACAT 61.025 55.000 0.00 0.00 45.71 2.71
192 193 1.669760 GGATGCCGTCGTCCAAACA 60.670 57.895 0.00 0.00 45.71 2.83
193 194 3.174788 GGATGCCGTCGTCCAAAC 58.825 61.111 0.00 0.00 45.71 2.93
197 198 1.079405 TTCAAGGATGCCGTCGTCC 60.079 57.895 0.00 0.00 46.57 4.79
198 199 1.683790 CGTTCAAGGATGCCGTCGTC 61.684 60.000 0.00 0.00 0.00 4.20
199 200 1.736645 CGTTCAAGGATGCCGTCGT 60.737 57.895 0.00 0.00 0.00 4.34
200 201 2.452813 CCGTTCAAGGATGCCGTCG 61.453 63.158 0.00 0.00 0.00 5.12
201 202 1.375523 ACCGTTCAAGGATGCCGTC 60.376 57.895 0.00 0.00 34.73 4.79
202 203 1.671054 CACCGTTCAAGGATGCCGT 60.671 57.895 0.00 0.00 34.73 5.68
203 204 3.039202 GCACCGTTCAAGGATGCCG 62.039 63.158 0.00 0.00 34.50 5.69
204 205 1.926511 CTGCACCGTTCAAGGATGCC 61.927 60.000 0.00 0.00 37.44 4.40
205 206 0.955428 TCTGCACCGTTCAAGGATGC 60.955 55.000 0.00 0.00 38.16 3.91
206 207 1.742761 ATCTGCACCGTTCAAGGATG 58.257 50.000 0.00 0.00 34.73 3.51
207 208 2.489329 CAAATCTGCACCGTTCAAGGAT 59.511 45.455 0.00 0.00 34.73 3.24
208 209 1.879380 CAAATCTGCACCGTTCAAGGA 59.121 47.619 0.00 0.00 34.73 3.36
209 210 1.608590 ACAAATCTGCACCGTTCAAGG 59.391 47.619 0.00 0.00 37.30 3.61
210 211 3.354089 AACAAATCTGCACCGTTCAAG 57.646 42.857 0.00 0.00 0.00 3.02
211 212 4.902443 TTAACAAATCTGCACCGTTCAA 57.098 36.364 0.00 0.00 0.00 2.69
212 213 4.096532 TGTTTAACAAATCTGCACCGTTCA 59.903 37.500 0.00 0.00 0.00 3.18
213 214 4.602995 TGTTTAACAAATCTGCACCGTTC 58.397 39.130 0.00 0.00 0.00 3.95
214 215 4.640789 TGTTTAACAAATCTGCACCGTT 57.359 36.364 0.00 0.00 0.00 4.44
215 216 4.640789 TTGTTTAACAAATCTGCACCGT 57.359 36.364 8.17 0.00 34.76 4.83
216 217 6.378582 AGTATTGTTTAACAAATCTGCACCG 58.621 36.000 14.70 0.00 41.96 4.94
217 218 8.512138 AGTAGTATTGTTTAACAAATCTGCACC 58.488 33.333 22.71 12.38 41.96 5.01
218 219 9.543018 GAGTAGTATTGTTTAACAAATCTGCAC 57.457 33.333 22.71 17.32 41.96 4.57
219 220 9.278978 TGAGTAGTATTGTTTAACAAATCTGCA 57.721 29.630 22.71 16.29 41.96 4.41
223 224 9.537848 CCGTTGAGTAGTATTGTTTAACAAATC 57.462 33.333 14.70 10.32 41.96 2.17
224 225 8.508875 CCCGTTGAGTAGTATTGTTTAACAAAT 58.491 33.333 14.70 6.69 41.96 2.32
225 226 7.498570 ACCCGTTGAGTAGTATTGTTTAACAAA 59.501 33.333 14.70 2.08 41.96 2.83
226 227 6.991531 ACCCGTTGAGTAGTATTGTTTAACAA 59.008 34.615 13.12 13.12 42.95 2.83
227 228 6.424509 CACCCGTTGAGTAGTATTGTTTAACA 59.575 38.462 0.00 0.00 0.00 2.41
228 229 6.619232 GCACCCGTTGAGTAGTATTGTTTAAC 60.619 42.308 0.00 0.00 0.00 2.01
229 230 5.409214 GCACCCGTTGAGTAGTATTGTTTAA 59.591 40.000 0.00 0.00 0.00 1.52
230 231 4.931002 GCACCCGTTGAGTAGTATTGTTTA 59.069 41.667 0.00 0.00 0.00 2.01
231 232 3.749609 GCACCCGTTGAGTAGTATTGTTT 59.250 43.478 0.00 0.00 0.00 2.83
232 233 3.007614 AGCACCCGTTGAGTAGTATTGTT 59.992 43.478 0.00 0.00 0.00 2.83
233 234 2.565834 AGCACCCGTTGAGTAGTATTGT 59.434 45.455 0.00 0.00 0.00 2.71
234 235 2.930040 CAGCACCCGTTGAGTAGTATTG 59.070 50.000 0.00 0.00 0.00 1.90
235 236 2.565834 ACAGCACCCGTTGAGTAGTATT 59.434 45.455 0.00 0.00 0.00 1.89
236 237 2.176889 ACAGCACCCGTTGAGTAGTAT 58.823 47.619 0.00 0.00 0.00 2.12
237 238 1.624336 ACAGCACCCGTTGAGTAGTA 58.376 50.000 0.00 0.00 0.00 1.82
238 239 0.756903 AACAGCACCCGTTGAGTAGT 59.243 50.000 0.00 0.00 0.00 2.73
239 240 1.148310 CAACAGCACCCGTTGAGTAG 58.852 55.000 0.00 0.00 45.30 2.57
240 241 0.466543 ACAACAGCACCCGTTGAGTA 59.533 50.000 9.81 0.00 45.30 2.59
241 242 0.814010 GACAACAGCACCCGTTGAGT 60.814 55.000 9.81 0.00 45.30 3.41
242 243 1.507141 GGACAACAGCACCCGTTGAG 61.507 60.000 9.81 0.00 45.30 3.02
243 244 1.525077 GGACAACAGCACCCGTTGA 60.525 57.895 9.81 0.00 45.30 3.18
245 246 0.889186 GATGGACAACAGCACCCGTT 60.889 55.000 0.00 0.00 35.03 4.44
246 247 1.302511 GATGGACAACAGCACCCGT 60.303 57.895 0.00 0.00 35.03 5.28
247 248 2.390599 CGATGGACAACAGCACCCG 61.391 63.158 0.00 0.00 34.42 5.28
248 249 1.298859 GACGATGGACAACAGCACCC 61.299 60.000 0.00 0.00 34.42 4.61
249 250 1.298859 GGACGATGGACAACAGCACC 61.299 60.000 0.00 0.00 34.42 5.01
250 251 0.602638 TGGACGATGGACAACAGCAC 60.603 55.000 0.00 0.00 34.42 4.40
251 252 0.602638 GTGGACGATGGACAACAGCA 60.603 55.000 0.00 0.00 34.42 4.41
252 253 0.602638 TGTGGACGATGGACAACAGC 60.603 55.000 0.00 0.00 0.00 4.40
253 254 1.877637 TTGTGGACGATGGACAACAG 58.122 50.000 0.00 0.00 0.00 3.16
254 255 2.333688 TTTGTGGACGATGGACAACA 57.666 45.000 0.00 0.00 29.44 3.33
255 256 2.159707 CGATTTGTGGACGATGGACAAC 60.160 50.000 0.00 0.00 29.44 3.32
256 257 2.073056 CGATTTGTGGACGATGGACAA 58.927 47.619 0.00 0.00 0.00 3.18
257 258 1.001520 ACGATTTGTGGACGATGGACA 59.998 47.619 0.00 0.00 0.00 4.02
258 259 1.393539 CACGATTTGTGGACGATGGAC 59.606 52.381 0.00 0.00 45.21 4.02
259 260 1.720805 CACGATTTGTGGACGATGGA 58.279 50.000 0.00 0.00 45.21 3.41
269 270 2.094258 CGATAGCTTGTGCACGATTTGT 59.906 45.455 13.13 0.00 42.74 2.83
270 271 2.094258 ACGATAGCTTGTGCACGATTTG 59.906 45.455 13.13 0.00 42.74 2.32
271 272 2.346803 ACGATAGCTTGTGCACGATTT 58.653 42.857 13.13 4.10 42.74 2.17
272 273 1.927174 GACGATAGCTTGTGCACGATT 59.073 47.619 13.13 4.47 42.74 3.34
273 274 1.135139 AGACGATAGCTTGTGCACGAT 59.865 47.619 13.13 0.00 42.74 3.73
274 275 0.526211 AGACGATAGCTTGTGCACGA 59.474 50.000 13.13 9.87 42.74 4.35
275 276 0.642291 CAGACGATAGCTTGTGCACG 59.358 55.000 13.13 0.00 42.74 5.34
276 277 1.391485 CACAGACGATAGCTTGTGCAC 59.609 52.381 10.75 10.75 43.50 4.57
277 278 1.713597 CACAGACGATAGCTTGTGCA 58.286 50.000 0.00 0.00 43.50 4.57
280 281 2.492088 TGCTACACAGACGATAGCTTGT 59.508 45.455 0.00 0.00 41.58 3.16
281 282 2.854777 GTGCTACACAGACGATAGCTTG 59.145 50.000 0.00 0.00 41.58 4.01
282 283 2.755655 AGTGCTACACAGACGATAGCTT 59.244 45.455 0.00 0.00 41.58 3.74
283 284 2.098280 CAGTGCTACACAGACGATAGCT 59.902 50.000 0.00 0.00 41.58 3.32
284 285 2.455032 CAGTGCTACACAGACGATAGC 58.545 52.381 0.00 0.00 41.44 2.97
285 286 2.098280 AGCAGTGCTACACAGACGATAG 59.902 50.000 18.11 0.00 36.99 2.08
286 287 2.092323 AGCAGTGCTACACAGACGATA 58.908 47.619 18.11 0.00 36.99 2.92
287 288 0.891373 AGCAGTGCTACACAGACGAT 59.109 50.000 18.11 0.00 36.99 3.73
288 289 0.673985 AAGCAGTGCTACACAGACGA 59.326 50.000 20.09 0.00 38.25 4.20
289 290 1.502231 AAAGCAGTGCTACACAGACG 58.498 50.000 20.09 0.00 38.25 4.18
290 291 5.385617 CAATAAAAGCAGTGCTACACAGAC 58.614 41.667 20.09 0.00 38.25 3.51
291 292 4.455533 CCAATAAAAGCAGTGCTACACAGA 59.544 41.667 20.09 1.21 38.25 3.41
292 293 4.726416 CCAATAAAAGCAGTGCTACACAG 58.274 43.478 20.09 7.20 38.25 3.66
293 294 3.057596 GCCAATAAAAGCAGTGCTACACA 60.058 43.478 20.09 4.53 38.25 3.72
294 295 3.191371 AGCCAATAAAAGCAGTGCTACAC 59.809 43.478 20.09 2.55 38.25 2.90
295 296 3.420893 AGCCAATAAAAGCAGTGCTACA 58.579 40.909 20.09 6.88 38.25 2.74
296 297 4.168760 CAAGCCAATAAAAGCAGTGCTAC 58.831 43.478 20.09 0.92 38.25 3.58
297 298 3.367292 GCAAGCCAATAAAAGCAGTGCTA 60.367 43.478 20.09 2.67 38.25 3.49
298 299 2.611224 GCAAGCCAATAAAAGCAGTGCT 60.611 45.455 13.14 13.14 42.56 4.40
299 300 1.728425 GCAAGCCAATAAAAGCAGTGC 59.272 47.619 7.13 7.13 35.87 4.40
300 301 3.308438 AGCAAGCCAATAAAAGCAGTG 57.692 42.857 0.00 0.00 0.00 3.66
301 302 4.678840 GCATAGCAAGCCAATAAAAGCAGT 60.679 41.667 0.00 0.00 0.00 4.40
302 303 3.800506 GCATAGCAAGCCAATAAAAGCAG 59.199 43.478 0.00 0.00 0.00 4.24
303 304 3.195182 TGCATAGCAAGCCAATAAAAGCA 59.805 39.130 0.00 0.00 34.76 3.91
304 305 3.784338 TGCATAGCAAGCCAATAAAAGC 58.216 40.909 0.00 0.00 34.76 3.51
305 306 4.748102 CCATGCATAGCAAGCCAATAAAAG 59.252 41.667 0.00 0.00 43.62 2.27
306 307 4.405036 TCCATGCATAGCAAGCCAATAAAA 59.595 37.500 0.00 0.00 43.62 1.52
307 308 3.959449 TCCATGCATAGCAAGCCAATAAA 59.041 39.130 0.00 0.00 43.62 1.40
308 309 3.564264 TCCATGCATAGCAAGCCAATAA 58.436 40.909 0.00 0.00 43.62 1.40
309 310 3.226682 TCCATGCATAGCAAGCCAATA 57.773 42.857 0.00 0.00 43.62 1.90
313 314 3.152341 ACTATTCCATGCATAGCAAGCC 58.848 45.455 0.00 0.00 43.62 4.35
374 375 9.161629 CTCACAGGTTCATACATAAAACATGTA 57.838 33.333 0.00 0.00 43.57 2.29
382 385 9.811995 GTATTGTACTCACAGGTTCATACATAA 57.188 33.333 0.00 0.00 35.67 1.90
514 522 1.969085 CTACAGGGTGCCACGTACA 59.031 57.895 0.00 0.00 0.00 2.90
652 660 3.490759 CATGACGTCGGCACAGCC 61.491 66.667 0.91 0.00 46.75 4.85
720 728 4.454847 GCTATATATATACAGCCGAGCGGA 59.545 45.833 13.94 0.00 37.50 5.54
924 946 5.146010 GCTACTGGCTAGCTAAGATGAAT 57.854 43.478 20.35 4.72 44.24 2.57
985 1008 4.885907 CCTATGTATGAATGGATGGATGGC 59.114 45.833 0.00 0.00 0.00 4.40
1003 1031 0.568192 TCCCTCCCTCCTTCCCTATG 59.432 60.000 0.00 0.00 0.00 2.23
1007 1035 2.040359 CCTCCCTCCCTCCTTCCC 60.040 72.222 0.00 0.00 0.00 3.97
1008 1036 2.040359 CCCTCCCTCCCTCCTTCC 60.040 72.222 0.00 0.00 0.00 3.46
1009 1037 1.074850 CTCCCTCCCTCCCTCCTTC 60.075 68.421 0.00 0.00 0.00 3.46
1010 1038 1.550374 TCTCCCTCCCTCCCTCCTT 60.550 63.158 0.00 0.00 0.00 3.36
1011 1039 2.018086 CTCTCCCTCCCTCCCTCCT 61.018 68.421 0.00 0.00 0.00 3.69
1350 1382 3.410628 TGATGATGGTGGCGCCCT 61.411 61.111 26.77 4.14 36.04 5.19
1423 1455 4.767255 GTGCTCGCCAGACCCAGG 62.767 72.222 0.00 0.00 0.00 4.45
1623 1661 1.535462 TGCTTTGCTTAGCCGAAGAAC 59.465 47.619 17.57 5.36 40.49 3.01
1640 1678 0.035056 GATGGGGTACACTGCTTGCT 60.035 55.000 0.00 0.00 0.00 3.91
1641 1679 0.322456 TGATGGGGTACACTGCTTGC 60.322 55.000 0.00 0.00 0.00 4.01
1642 1680 2.292267 GATGATGGGGTACACTGCTTG 58.708 52.381 0.00 0.00 0.00 4.01
1644 1682 0.465705 CGATGATGGGGTACACTGCT 59.534 55.000 0.00 0.00 0.00 4.24
1645 1683 0.178068 ACGATGATGGGGTACACTGC 59.822 55.000 0.00 0.00 0.00 4.40
1647 1685 2.032620 GAGACGATGATGGGGTACACT 58.967 52.381 0.00 0.00 0.00 3.55
1648 1686 1.269102 CGAGACGATGATGGGGTACAC 60.269 57.143 0.00 0.00 0.00 2.90
1651 1689 1.029681 CACGAGACGATGATGGGGTA 58.970 55.000 0.00 0.00 0.00 3.69
1655 1693 1.832600 CTGACACGAGACGATGATGG 58.167 55.000 0.00 0.00 0.00 3.51
1771 1832 5.261216 TCTTCTTCATATTTTCCCACACCC 58.739 41.667 0.00 0.00 0.00 4.61
1843 1906 1.137675 TCTACCTGCAGCAGCTACATG 59.862 52.381 17.81 4.69 42.74 3.21
1945 2029 9.250246 TGGATTATTATTTTCCGGAGAAGTTTT 57.750 29.630 13.45 0.00 32.35 2.43
1946 2030 8.817092 TGGATTATTATTTTCCGGAGAAGTTT 57.183 30.769 13.45 0.00 32.35 2.66
1991 2075 1.424403 TACGCCAACACGATCACTTG 58.576 50.000 0.00 0.00 36.70 3.16
2020 2104 3.914312 ACAGTCAGAGTGTAATCCAACG 58.086 45.455 9.33 0.00 28.20 4.10
2032 2116 2.158608 ACCCCAAGGAAAACAGTCAGAG 60.159 50.000 0.00 0.00 36.73 3.35
2033 2117 1.850345 ACCCCAAGGAAAACAGTCAGA 59.150 47.619 0.00 0.00 36.73 3.27
2036 2120 1.686587 CCAACCCCAAGGAAAACAGTC 59.313 52.381 0.00 0.00 36.73 3.51
2050 2134 3.009143 ACAGTGAGAAATACTCCCAACCC 59.991 47.826 0.00 0.00 44.34 4.11
2051 2135 4.287766 ACAGTGAGAAATACTCCCAACC 57.712 45.455 0.00 0.00 44.34 3.77
2092 2176 0.681564 AGCTACTCCGCTGCACTAGT 60.682 55.000 0.00 2.13 39.16 2.57
2094 2178 1.404391 GTAAGCTACTCCGCTGCACTA 59.596 52.381 0.00 0.00 40.79 2.74
2095 2179 0.173708 GTAAGCTACTCCGCTGCACT 59.826 55.000 0.00 0.00 40.79 4.40
2096 2180 1.140407 CGTAAGCTACTCCGCTGCAC 61.140 60.000 0.00 0.00 40.79 4.57
2097 2181 1.138883 CGTAAGCTACTCCGCTGCA 59.861 57.895 0.00 0.00 40.79 4.41
2098 2182 1.589196 CCGTAAGCTACTCCGCTGC 60.589 63.158 0.00 0.00 40.79 5.25
2099 2183 1.065928 CCCGTAAGCTACTCCGCTG 59.934 63.158 0.00 0.00 40.79 5.18
2100 2184 2.783288 GCCCGTAAGCTACTCCGCT 61.783 63.158 0.00 0.00 43.31 5.52
2101 2185 2.279318 GCCCGTAAGCTACTCCGC 60.279 66.667 0.00 0.00 0.00 5.54
2102 2186 1.226888 GTGCCCGTAAGCTACTCCG 60.227 63.158 0.00 0.00 0.00 4.63
2103 2187 1.226888 CGTGCCCGTAAGCTACTCC 60.227 63.158 0.00 0.00 0.00 3.85
2104 2188 4.396854 CGTGCCCGTAAGCTACTC 57.603 61.111 0.00 0.00 0.00 2.59
2118 2202 1.493772 TCTGTTTTGGAGCGTACGTG 58.506 50.000 17.90 0.00 0.00 4.49
2131 2215 5.409826 GTGTATAGCAGTGCTCTTTCTGTTT 59.590 40.000 23.64 0.00 40.44 2.83
2132 2216 4.932200 GTGTATAGCAGTGCTCTTTCTGTT 59.068 41.667 23.64 0.00 40.44 3.16
2133 2217 4.021104 TGTGTATAGCAGTGCTCTTTCTGT 60.021 41.667 23.64 0.00 40.44 3.41
2134 2218 4.328440 GTGTGTATAGCAGTGCTCTTTCTG 59.672 45.833 23.64 0.00 40.44 3.02
2135 2219 4.499183 GTGTGTATAGCAGTGCTCTTTCT 58.501 43.478 23.64 5.15 40.44 2.52
2136 2220 3.304559 CGTGTGTATAGCAGTGCTCTTTC 59.695 47.826 23.64 11.31 40.44 2.62
2137 2221 3.056821 TCGTGTGTATAGCAGTGCTCTTT 60.057 43.478 23.64 10.57 40.44 2.52
2138 2222 2.492088 TCGTGTGTATAGCAGTGCTCTT 59.508 45.455 23.64 13.27 40.44 2.85
2139 2223 2.092323 TCGTGTGTATAGCAGTGCTCT 58.908 47.619 23.64 15.19 40.44 4.09
2140 2224 2.186076 GTCGTGTGTATAGCAGTGCTC 58.814 52.381 23.64 8.26 40.44 4.26
2141 2225 1.467543 CGTCGTGTGTATAGCAGTGCT 60.468 52.381 23.44 23.44 43.41 4.40
2142 2226 0.914551 CGTCGTGTGTATAGCAGTGC 59.085 55.000 7.13 7.13 0.00 4.40
2143 2227 1.131693 TCCGTCGTGTGTATAGCAGTG 59.868 52.381 0.00 0.00 0.00 3.66
2144 2228 1.456296 TCCGTCGTGTGTATAGCAGT 58.544 50.000 0.00 0.00 0.00 4.40
2145 2229 2.385315 CATCCGTCGTGTGTATAGCAG 58.615 52.381 0.00 0.00 0.00 4.24
2146 2230 1.066454 CCATCCGTCGTGTGTATAGCA 59.934 52.381 0.00 0.00 0.00 3.49
2147 2231 1.335810 TCCATCCGTCGTGTGTATAGC 59.664 52.381 0.00 0.00 0.00 2.97
2148 2232 2.601504 CGTCCATCCGTCGTGTGTATAG 60.602 54.545 0.00 0.00 0.00 1.31
2149 2233 1.331447 CGTCCATCCGTCGTGTGTATA 59.669 52.381 0.00 0.00 0.00 1.47
2150 2234 0.099968 CGTCCATCCGTCGTGTGTAT 59.900 55.000 0.00 0.00 0.00 2.29
2151 2235 1.503091 CGTCCATCCGTCGTGTGTA 59.497 57.895 0.00 0.00 0.00 2.90
2152 2236 2.257371 CGTCCATCCGTCGTGTGT 59.743 61.111 0.00 0.00 0.00 3.72
2153 2237 3.179265 GCGTCCATCCGTCGTGTG 61.179 66.667 0.00 0.00 0.00 3.82
2154 2238 3.676605 TGCGTCCATCCGTCGTGT 61.677 61.111 0.00 0.00 0.00 4.49
2155 2239 3.179265 GTGCGTCCATCCGTCGTG 61.179 66.667 0.00 0.00 0.00 4.35
2156 2240 4.771356 CGTGCGTCCATCCGTCGT 62.771 66.667 0.00 0.00 0.00 4.34
2157 2241 4.470170 TCGTGCGTCCATCCGTCG 62.470 66.667 0.00 0.00 0.00 5.12
2158 2242 2.879462 GTCGTGCGTCCATCCGTC 60.879 66.667 0.00 0.00 0.00 4.79
2159 2243 4.430765 GGTCGTGCGTCCATCCGT 62.431 66.667 3.21 0.00 0.00 4.69
2161 2245 4.077184 TGGGTCGTGCGTCCATCC 62.077 66.667 9.71 0.00 0.00 3.51
2162 2246 2.813908 GTGGGTCGTGCGTCCATC 60.814 66.667 9.71 0.00 32.71 3.51
2163 2247 3.589654 CTGTGGGTCGTGCGTCCAT 62.590 63.158 9.71 0.00 32.71 3.41
2164 2248 4.293648 CTGTGGGTCGTGCGTCCA 62.294 66.667 9.71 7.54 0.00 4.02
2165 2249 3.986006 TCTGTGGGTCGTGCGTCC 61.986 66.667 0.00 0.00 0.00 4.79
2166 2250 2.733593 GTCTGTGGGTCGTGCGTC 60.734 66.667 0.00 0.00 0.00 5.19
2167 2251 4.640855 CGTCTGTGGGTCGTGCGT 62.641 66.667 0.00 0.00 0.00 5.24
2168 2252 4.337060 TCGTCTGTGGGTCGTGCG 62.337 66.667 0.00 0.00 0.00 5.34
2169 2253 2.733593 GTCGTCTGTGGGTCGTGC 60.734 66.667 0.00 0.00 0.00 5.34
2170 2254 0.939577 CTTGTCGTCTGTGGGTCGTG 60.940 60.000 0.00 0.00 0.00 4.35
2171 2255 1.362717 CTTGTCGTCTGTGGGTCGT 59.637 57.895 0.00 0.00 0.00 4.34
2172 2256 0.663568 GACTTGTCGTCTGTGGGTCG 60.664 60.000 0.00 0.00 39.61 4.79
2173 2257 0.387929 TGACTTGTCGTCTGTGGGTC 59.612 55.000 0.00 0.00 43.25 4.46
2174 2258 0.389391 CTGACTTGTCGTCTGTGGGT 59.611 55.000 0.00 0.00 43.25 4.51
2175 2259 0.319900 CCTGACTTGTCGTCTGTGGG 60.320 60.000 0.00 0.00 43.25 4.61
2176 2260 0.389391 ACCTGACTTGTCGTCTGTGG 59.611 55.000 0.00 0.00 43.25 4.17
2177 2261 2.552743 TCTACCTGACTTGTCGTCTGTG 59.447 50.000 0.00 0.00 43.25 3.66
2178 2262 2.553172 GTCTACCTGACTTGTCGTCTGT 59.447 50.000 0.00 0.00 43.25 3.41
2179 2263 2.095161 GGTCTACCTGACTTGTCGTCTG 60.095 54.545 0.00 0.00 44.74 3.51
2180 2264 2.161030 GGTCTACCTGACTTGTCGTCT 58.839 52.381 0.00 0.00 44.74 4.18
2181 2265 1.135746 CGGTCTACCTGACTTGTCGTC 60.136 57.143 0.00 0.00 44.74 4.20
2182 2266 0.879765 CGGTCTACCTGACTTGTCGT 59.120 55.000 0.00 0.00 44.74 4.34
2183 2267 0.879765 ACGGTCTACCTGACTTGTCG 59.120 55.000 0.00 0.00 44.74 4.35
2184 2268 2.422832 CCTACGGTCTACCTGACTTGTC 59.577 54.545 0.00 0.00 44.74 3.18
2185 2269 2.040813 TCCTACGGTCTACCTGACTTGT 59.959 50.000 0.00 0.00 44.74 3.16
2186 2270 2.719739 TCCTACGGTCTACCTGACTTG 58.280 52.381 0.00 0.00 44.74 3.16
2187 2271 3.666345 ATCCTACGGTCTACCTGACTT 57.334 47.619 0.00 0.00 44.74 3.01
2188 2272 3.666345 AATCCTACGGTCTACCTGACT 57.334 47.619 0.00 0.00 44.74 3.41
2189 2273 3.252944 GCTAATCCTACGGTCTACCTGAC 59.747 52.174 0.00 0.00 44.63 3.51
2190 2274 3.137913 AGCTAATCCTACGGTCTACCTGA 59.862 47.826 0.00 0.00 0.00 3.86
2191 2275 3.253677 CAGCTAATCCTACGGTCTACCTG 59.746 52.174 0.00 0.00 0.00 4.00
2192 2276 3.488363 CAGCTAATCCTACGGTCTACCT 58.512 50.000 0.00 0.00 0.00 3.08
2193 2277 2.557490 CCAGCTAATCCTACGGTCTACC 59.443 54.545 0.00 0.00 0.00 3.18
2194 2278 2.557490 CCCAGCTAATCCTACGGTCTAC 59.443 54.545 0.00 0.00 0.00 2.59
2195 2279 2.490351 CCCCAGCTAATCCTACGGTCTA 60.490 54.545 0.00 0.00 0.00 2.59
2196 2280 1.705873 CCCAGCTAATCCTACGGTCT 58.294 55.000 0.00 0.00 0.00 3.85
2197 2281 0.680061 CCCCAGCTAATCCTACGGTC 59.320 60.000 0.00 0.00 0.00 4.79
2198 2282 0.031414 ACCCCAGCTAATCCTACGGT 60.031 55.000 0.00 0.00 0.00 4.83
2199 2283 1.129058 AACCCCAGCTAATCCTACGG 58.871 55.000 0.00 0.00 0.00 4.02
2200 2284 3.277142 AAAACCCCAGCTAATCCTACG 57.723 47.619 0.00 0.00 0.00 3.51
2201 2285 7.013369 CAGATTAAAAACCCCAGCTAATCCTAC 59.987 40.741 0.00 0.00 31.97 3.18
2202 2286 7.060421 CAGATTAAAAACCCCAGCTAATCCTA 58.940 38.462 0.00 0.00 31.97 2.94
2203 2287 5.893824 CAGATTAAAAACCCCAGCTAATCCT 59.106 40.000 0.00 0.00 31.97 3.24
2204 2288 5.656859 ACAGATTAAAAACCCCAGCTAATCC 59.343 40.000 0.00 0.00 31.97 3.01
2205 2289 6.152831 ACACAGATTAAAAACCCCAGCTAATC 59.847 38.462 0.00 0.00 31.82 1.75
2206 2290 6.016555 ACACAGATTAAAAACCCCAGCTAAT 58.983 36.000 0.00 0.00 0.00 1.73
2207 2291 5.242838 CACACAGATTAAAAACCCCAGCTAA 59.757 40.000 0.00 0.00 0.00 3.09
2208 2292 4.764823 CACACAGATTAAAAACCCCAGCTA 59.235 41.667 0.00 0.00 0.00 3.32
2209 2293 3.573967 CACACAGATTAAAAACCCCAGCT 59.426 43.478 0.00 0.00 0.00 4.24
2210 2294 3.306019 CCACACAGATTAAAAACCCCAGC 60.306 47.826 0.00 0.00 0.00 4.85
2211 2295 3.306019 GCCACACAGATTAAAAACCCCAG 60.306 47.826 0.00 0.00 0.00 4.45
2212 2296 2.630580 GCCACACAGATTAAAAACCCCA 59.369 45.455 0.00 0.00 0.00 4.96
2213 2297 2.897326 AGCCACACAGATTAAAAACCCC 59.103 45.455 0.00 0.00 0.00 4.95
2214 2298 3.056821 GGAGCCACACAGATTAAAAACCC 60.057 47.826 0.00 0.00 0.00 4.11
2215 2299 3.826729 AGGAGCCACACAGATTAAAAACC 59.173 43.478 0.00 0.00 0.00 3.27
2216 2300 4.798574 CAGGAGCCACACAGATTAAAAAC 58.201 43.478 0.00 0.00 0.00 2.43
2217 2301 3.255642 GCAGGAGCCACACAGATTAAAAA 59.744 43.478 0.00 0.00 33.58 1.94
2218 2302 2.819608 GCAGGAGCCACACAGATTAAAA 59.180 45.455 0.00 0.00 33.58 1.52
2219 2303 2.040278 AGCAGGAGCCACACAGATTAAA 59.960 45.455 0.00 0.00 43.56 1.52
2220 2304 1.630369 AGCAGGAGCCACACAGATTAA 59.370 47.619 0.00 0.00 43.56 1.40
2221 2305 1.279496 AGCAGGAGCCACACAGATTA 58.721 50.000 0.00 0.00 43.56 1.75
2222 2306 0.403271 AAGCAGGAGCCACACAGATT 59.597 50.000 0.00 0.00 43.56 2.40
2223 2307 0.035630 GAAGCAGGAGCCACACAGAT 60.036 55.000 0.00 0.00 43.56 2.90
2224 2308 1.372683 GAAGCAGGAGCCACACAGA 59.627 57.895 0.00 0.00 43.56 3.41
2225 2309 1.673665 GGAAGCAGGAGCCACACAG 60.674 63.158 0.00 0.00 43.56 3.66
2226 2310 2.431683 GGAAGCAGGAGCCACACA 59.568 61.111 0.00 0.00 43.56 3.72
2227 2311 2.743928 CGGAAGCAGGAGCCACAC 60.744 66.667 0.00 0.00 43.56 3.82
2228 2312 3.240134 GACGGAAGCAGGAGCCACA 62.240 63.158 0.00 0.00 43.56 4.17
2229 2313 2.435059 GACGGAAGCAGGAGCCAC 60.435 66.667 0.00 0.00 43.56 5.01
2230 2314 4.069232 CGACGGAAGCAGGAGCCA 62.069 66.667 0.00 0.00 43.56 4.75
2231 2315 4.821589 CCGACGGAAGCAGGAGCC 62.822 72.222 8.64 0.00 43.56 4.70
2232 2316 4.821589 CCCGACGGAAGCAGGAGC 62.822 72.222 17.49 0.00 42.56 4.70
2233 2317 4.821589 GCCCGACGGAAGCAGGAG 62.822 72.222 17.49 0.00 33.43 3.69
2236 2320 4.680237 TGTGCCCGACGGAAGCAG 62.680 66.667 17.49 0.00 37.15 4.24
2237 2321 4.980805 GTGTGCCCGACGGAAGCA 62.981 66.667 17.49 14.91 0.00 3.91
2238 2322 4.980805 TGTGTGCCCGACGGAAGC 62.981 66.667 17.49 12.09 0.00 3.86
2239 2323 2.047274 ATGTGTGCCCGACGGAAG 60.047 61.111 17.49 0.00 0.00 3.46
2240 2324 2.047655 GATGTGTGCCCGACGGAA 60.048 61.111 17.49 0.00 0.00 4.30
2241 2325 4.429212 CGATGTGTGCCCGACGGA 62.429 66.667 17.49 0.00 0.00 4.69
2242 2326 4.735132 ACGATGTGTGCCCGACGG 62.735 66.667 6.99 6.99 0.00 4.79
2243 2327 3.179265 GACGATGTGTGCCCGACG 61.179 66.667 0.00 0.00 0.00 5.12
2244 2328 2.813908 GGACGATGTGTGCCCGAC 60.814 66.667 0.00 0.00 31.75 4.79
2245 2329 3.295304 CTGGACGATGTGTGCCCGA 62.295 63.158 0.00 0.00 38.31 5.14
2246 2330 2.815211 CTGGACGATGTGTGCCCG 60.815 66.667 0.00 0.00 38.31 6.13
2247 2331 3.127533 GCTGGACGATGTGTGCCC 61.128 66.667 0.00 0.00 38.31 5.36
2248 2332 2.358615 TGCTGGACGATGTGTGCC 60.359 61.111 0.00 0.00 38.31 5.01
2249 2333 1.630244 GACTGCTGGACGATGTGTGC 61.630 60.000 0.00 0.00 39.78 4.57
2250 2334 0.319813 TGACTGCTGGACGATGTGTG 60.320 55.000 0.00 0.00 0.00 3.82
2251 2335 0.392706 TTGACTGCTGGACGATGTGT 59.607 50.000 0.00 0.00 0.00 3.72
2252 2336 1.662629 GATTGACTGCTGGACGATGTG 59.337 52.381 0.00 0.00 0.00 3.21
2253 2337 1.737029 CGATTGACTGCTGGACGATGT 60.737 52.381 0.00 0.00 0.00 3.06
2254 2338 0.926155 CGATTGACTGCTGGACGATG 59.074 55.000 0.00 0.00 0.00 3.84
2255 2339 0.532573 ACGATTGACTGCTGGACGAT 59.467 50.000 0.00 0.00 0.00 3.73
2256 2340 0.388520 CACGATTGACTGCTGGACGA 60.389 55.000 0.00 0.00 0.00 4.20
2257 2341 0.667487 ACACGATTGACTGCTGGACG 60.667 55.000 0.00 0.00 0.00 4.79
2258 2342 0.792640 CACACGATTGACTGCTGGAC 59.207 55.000 0.00 0.00 0.00 4.02
2259 2343 0.950555 GCACACGATTGACTGCTGGA 60.951 55.000 0.00 0.00 0.00 3.86
2260 2344 1.229975 TGCACACGATTGACTGCTGG 61.230 55.000 0.00 0.00 0.00 4.85
2261 2345 0.165295 CTGCACACGATTGACTGCTG 59.835 55.000 0.00 0.00 0.00 4.41
2262 2346 0.033920 TCTGCACACGATTGACTGCT 59.966 50.000 0.00 0.00 0.00 4.24
2263 2347 0.441533 CTCTGCACACGATTGACTGC 59.558 55.000 0.00 0.00 0.00 4.40
2264 2348 0.441533 GCTCTGCACACGATTGACTG 59.558 55.000 0.00 0.00 0.00 3.51
2265 2349 0.033920 TGCTCTGCACACGATTGACT 59.966 50.000 0.00 0.00 31.71 3.41
2266 2350 2.532186 TGCTCTGCACACGATTGAC 58.468 52.632 0.00 0.00 31.71 3.18
2276 2360 1.599071 CTGTTTCGAAAGTGCTCTGCA 59.401 47.619 11.66 2.15 35.60 4.41
2277 2361 1.867233 TCTGTTTCGAAAGTGCTCTGC 59.133 47.619 11.66 0.00 0.00 4.26
2278 2362 4.536364 TTTCTGTTTCGAAAGTGCTCTG 57.464 40.909 11.66 3.59 0.00 3.35
2279 2363 6.706270 TCTTATTTCTGTTTCGAAAGTGCTCT 59.294 34.615 11.66 0.00 36.44 4.09
2280 2364 6.888430 TCTTATTTCTGTTTCGAAAGTGCTC 58.112 36.000 11.66 0.00 36.44 4.26
2281 2365 6.073003 CCTCTTATTTCTGTTTCGAAAGTGCT 60.073 38.462 11.66 0.00 36.44 4.40
2282 2366 6.080406 CCTCTTATTTCTGTTTCGAAAGTGC 58.920 40.000 11.66 0.00 36.44 4.40
2283 2367 6.603095 CCCTCTTATTTCTGTTTCGAAAGTG 58.397 40.000 11.66 7.26 36.44 3.16
2284 2368 5.181433 GCCCTCTTATTTCTGTTTCGAAAGT 59.819 40.000 11.66 0.00 36.44 2.66
2285 2369 5.631992 GCCCTCTTATTTCTGTTTCGAAAG 58.368 41.667 11.66 0.00 36.44 2.62
2286 2370 4.153475 CGCCCTCTTATTTCTGTTTCGAAA 59.847 41.667 6.47 6.47 37.31 3.46
2287 2371 3.682858 CGCCCTCTTATTTCTGTTTCGAA 59.317 43.478 0.00 0.00 0.00 3.71
2288 2372 3.056393 TCGCCCTCTTATTTCTGTTTCGA 60.056 43.478 0.00 0.00 0.00 3.71
2289 2373 3.259064 TCGCCCTCTTATTTCTGTTTCG 58.741 45.455 0.00 0.00 0.00 3.46
2290 2374 5.819825 ATTCGCCCTCTTATTTCTGTTTC 57.180 39.130 0.00 0.00 0.00 2.78
2330 2414 2.742760 TGTTCGCGCGGCCAATTA 60.743 55.556 31.69 5.26 0.00 1.40
2413 3529 1.004080 CAGTCCACACAGAGCTGGG 60.004 63.158 0.00 0.00 40.54 4.45
2502 3633 2.969238 CTATCAGCTTGCCGGCCG 60.969 66.667 26.77 21.04 0.00 6.13
2531 3662 2.031769 CCTGTTCACTCACGTACGTACA 60.032 50.000 22.34 18.63 0.00 2.90
2532 3663 2.224079 TCCTGTTCACTCACGTACGTAC 59.776 50.000 22.34 15.90 0.00 3.67
2574 3852 2.288948 GCTGATGATTCCTCGATGCTCT 60.289 50.000 0.00 0.00 0.00 4.09
2748 4037 0.748005 GTGTGTGGTTGCTGGAGTGT 60.748 55.000 0.00 0.00 0.00 3.55
2749 4038 0.747644 TGTGTGTGGTTGCTGGAGTG 60.748 55.000 0.00 0.00 0.00 3.51
2750 4039 0.748005 GTGTGTGTGGTTGCTGGAGT 60.748 55.000 0.00 0.00 0.00 3.85
2771 4060 0.538516 TGGATTTCCAACCCGTGTGG 60.539 55.000 0.00 0.00 44.35 4.17
2772 4061 3.028916 TGGATTTCCAACCCGTGTG 57.971 52.632 0.00 0.00 44.35 3.82


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.