Multiple sequence alignment - TraesCS2B01G285300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G285300 chr2B 100.000 2682 0 0 1 2682 393024785 393022104 0.000000e+00 4953.0
1 TraesCS2B01G285300 chr2B 82.927 615 94 9 2052 2661 603425112 603424504 6.530000e-151 544.0
2 TraesCS2B01G285300 chr2B 83.031 607 91 10 2052 2653 21741071 21741670 8.450000e-150 540.0
3 TraesCS2B01G285300 chr2B 92.424 132 8 2 1 131 162616576 162616706 1.270000e-43 187.0
4 TraesCS2B01G285300 chr2B 92.913 127 8 1 1 126 783882946 783882820 1.640000e-42 183.0
5 TraesCS2B01G285300 chr2B 92.248 129 9 1 1 128 180328390 180328262 5.900000e-42 182.0
6 TraesCS2B01G285300 chr2D 92.673 1283 34 14 744 1998 324283644 324282394 0.000000e+00 1794.0
7 TraesCS2B01G285300 chr2D 88.383 637 64 4 2052 2680 324282402 324281768 0.000000e+00 758.0
8 TraesCS2B01G285300 chr2D 95.238 147 5 1 161 305 324284003 324283857 5.770000e-57 231.0
9 TraesCS2B01G285300 chr2D 94.355 124 5 2 348 470 324283764 324283642 3.520000e-44 189.0
10 TraesCS2B01G285300 chr2A 91.778 1119 45 13 899 1997 394395005 394396096 0.000000e+00 1513.0
11 TraesCS2B01G285300 chr2A 94.382 178 5 3 744 916 394394791 394394968 4.400000e-68 268.0
12 TraesCS2B01G285300 chr2A 92.667 150 6 1 321 470 394394649 394394793 7.520000e-51 211.0
13 TraesCS2B01G285300 chr2A 92.414 145 11 0 161 305 394394161 394394305 9.730000e-50 207.0
14 TraesCS2B01G285300 chr3B 86.667 615 71 9 2052 2661 778000905 778000297 0.000000e+00 671.0
15 TraesCS2B01G285300 chr3B 91.667 132 10 1 1 131 406552608 406552477 5.900000e-42 182.0
16 TraesCS2B01G285300 chr4D 84.715 615 85 8 2052 2659 19338983 19338371 8.210000e-170 606.0
17 TraesCS2B01G285300 chr4D 83.252 615 93 9 2052 2659 449386802 449386191 8.390000e-155 556.0
18 TraesCS2B01G285300 chr6B 88.340 506 53 5 2052 2553 712315429 712315932 1.060000e-168 603.0
19 TraesCS2B01G285300 chr6B 96.853 286 9 0 468 753 101440214 101439929 1.870000e-131 479.0
20 TraesCS2B01G285300 chr6B 92.913 127 8 1 1 126 592446649 592446523 1.640000e-42 183.0
21 TraesCS2B01G285300 chr6B 92.248 129 9 1 1 128 695267881 695268009 5.900000e-42 182.0
22 TraesCS2B01G285300 chr3D 82.792 616 87 10 2052 2661 497898119 497898721 1.410000e-147 532.0
23 TraesCS2B01G285300 chr4A 82.724 602 91 10 2063 2655 729107815 729107218 8.510000e-145 523.0
24 TraesCS2B01G285300 chr4A 98.545 275 4 0 470 744 572648696 572648970 1.120000e-133 486.0
25 TraesCS2B01G285300 chr5B 97.865 281 6 0 470 750 144034267 144033987 1.120000e-133 486.0
26 TraesCS2B01G285300 chr5B 95.652 299 9 3 449 744 580735065 580735362 6.720000e-131 477.0
27 TraesCS2B01G285300 chr5B 92.308 130 9 1 1 129 9280034 9279905 1.640000e-42 183.0
28 TraesCS2B01G285300 chr5B 89.855 138 12 2 1 137 223463348 223463484 2.740000e-40 176.0
29 TraesCS2B01G285300 chr4B 97.857 280 6 0 467 746 649704846 649704567 4.010000e-133 484.0
30 TraesCS2B01G285300 chr4B 95.455 44 1 1 2011 2053 5063458 5063501 4.790000e-08 69.4
31 TraesCS2B01G285300 chr5A 97.849 279 6 0 466 744 523569431 523569709 1.440000e-132 483.0
32 TraesCS2B01G285300 chr1B 96.875 288 8 1 461 748 615614585 615614871 5.190000e-132 481.0
33 TraesCS2B01G285300 chr1B 91.111 135 11 1 1 134 101517218 101517084 5.900000e-42 182.0
34 TraesCS2B01G285300 chr7A 95.918 294 9 3 451 744 570171977 570172267 8.690000e-130 473.0
35 TraesCS2B01G285300 chr6A 96.774 279 9 0 470 748 554871728 554872006 1.450000e-127 466.0
36 TraesCS2B01G285300 chr7B 97.561 41 1 0 2011 2051 750121149 750121109 1.330000e-08 71.3


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G285300 chr2B 393022104 393024785 2681 True 4953.00 4953 100.00000 1 2682 1 chr2B.!!$R2 2681
1 TraesCS2B01G285300 chr2B 603424504 603425112 608 True 544.00 544 82.92700 2052 2661 1 chr2B.!!$R3 609
2 TraesCS2B01G285300 chr2B 21741071 21741670 599 False 540.00 540 83.03100 2052 2653 1 chr2B.!!$F1 601
3 TraesCS2B01G285300 chr2D 324281768 324284003 2235 True 743.00 1794 92.66225 161 2680 4 chr2D.!!$R1 2519
4 TraesCS2B01G285300 chr2A 394394161 394396096 1935 False 549.75 1513 92.81025 161 1997 4 chr2A.!!$F1 1836
5 TraesCS2B01G285300 chr3B 778000297 778000905 608 True 671.00 671 86.66700 2052 2661 1 chr3B.!!$R2 609
6 TraesCS2B01G285300 chr4D 19338371 19338983 612 True 606.00 606 84.71500 2052 2659 1 chr4D.!!$R1 607
7 TraesCS2B01G285300 chr4D 449386191 449386802 611 True 556.00 556 83.25200 2052 2659 1 chr4D.!!$R2 607
8 TraesCS2B01G285300 chr6B 712315429 712315932 503 False 603.00 603 88.34000 2052 2553 1 chr6B.!!$F2 501
9 TraesCS2B01G285300 chr3D 497898119 497898721 602 False 532.00 532 82.79200 2052 2661 1 chr3D.!!$F1 609
10 TraesCS2B01G285300 chr4A 729107218 729107815 597 True 523.00 523 82.72400 2063 2655 1 chr4A.!!$R1 592

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
486 827 0.042581 TCAGGCTGGTCATAGTGGGA 59.957 55.0 15.73 0.0 0.0 4.37 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2345 2774 0.030235 GGCGTTTGTCTTTGGTGGAC 59.97 55.0 0.0 0.0 0.0 4.02 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 2.029369 TGGGTCGAAAACGGACGG 59.971 61.111 0.00 0.00 35.24 4.79
18 19 2.339712 GGGTCGAAAACGGACGGA 59.660 61.111 0.00 0.00 35.24 4.69
19 20 1.300853 GGGTCGAAAACGGACGGAA 60.301 57.895 0.00 0.00 35.24 4.30
20 21 0.671472 GGGTCGAAAACGGACGGAAT 60.671 55.000 0.00 0.00 35.24 3.01
21 22 0.717784 GGTCGAAAACGGACGGAATC 59.282 55.000 0.00 0.00 35.24 2.52
22 23 0.717784 GTCGAAAACGGACGGAATCC 59.282 55.000 0.00 0.00 45.20 3.01
43 44 3.692791 GGACATTTATCCGTTTGAGGC 57.307 47.619 0.00 0.00 0.00 4.70
44 45 2.357952 GGACATTTATCCGTTTGAGGCC 59.642 50.000 0.00 0.00 0.00 5.19
45 46 2.014128 ACATTTATCCGTTTGAGGCCG 58.986 47.619 0.00 0.00 0.00 6.13
46 47 2.014128 CATTTATCCGTTTGAGGCCGT 58.986 47.619 0.00 0.00 0.00 5.68
47 48 1.444836 TTTATCCGTTTGAGGCCGTG 58.555 50.000 0.00 0.00 0.00 4.94
48 49 1.022451 TTATCCGTTTGAGGCCGTGC 61.022 55.000 0.00 0.00 0.00 5.34
87 88 7.979115 TTTGTCTTTTTATTCCAAACAGACG 57.021 32.000 9.99 0.00 32.35 4.18
88 89 6.067263 TGTCTTTTTATTCCAAACAGACGG 57.933 37.500 9.99 0.00 32.35 4.79
89 90 5.823570 TGTCTTTTTATTCCAAACAGACGGA 59.176 36.000 9.99 0.00 32.35 4.69
90 91 6.017440 TGTCTTTTTATTCCAAACAGACGGAG 60.017 38.462 9.99 0.00 32.35 4.63
91 92 4.759516 TTTTATTCCAAACAGACGGAGC 57.240 40.909 0.00 0.00 31.51 4.70
92 93 2.396590 TATTCCAAACAGACGGAGCC 57.603 50.000 0.00 0.00 31.51 4.70
93 94 0.673644 ATTCCAAACAGACGGAGCCG 60.674 55.000 7.48 7.48 46.03 5.52
94 95 2.725203 TTCCAAACAGACGGAGCCGG 62.725 60.000 14.07 0.00 44.69 6.13
95 96 2.342279 CAAACAGACGGAGCCGGA 59.658 61.111 5.05 0.00 44.69 5.14
96 97 2.027625 CAAACAGACGGAGCCGGAC 61.028 63.158 5.05 7.03 44.69 4.79
97 98 2.504274 AAACAGACGGAGCCGGACA 61.504 57.895 5.05 0.00 44.69 4.02
98 99 2.436087 AAACAGACGGAGCCGGACAG 62.436 60.000 5.05 0.98 44.69 3.51
99 100 4.135153 CAGACGGAGCCGGACAGG 62.135 72.222 5.05 0.00 44.69 4.00
100 101 4.361971 AGACGGAGCCGGACAGGA 62.362 66.667 5.05 0.00 45.00 3.86
101 102 3.148279 GACGGAGCCGGACAGGAT 61.148 66.667 5.05 0.00 44.48 3.24
102 103 1.826921 GACGGAGCCGGACAGGATA 60.827 63.158 5.05 0.00 39.82 2.59
103 104 1.797211 GACGGAGCCGGACAGGATAG 61.797 65.000 5.05 0.00 39.82 2.08
104 105 2.565645 CGGAGCCGGACAGGATAGG 61.566 68.421 5.05 0.00 39.82 2.57
105 106 2.210711 GGAGCCGGACAGGATAGGG 61.211 68.421 5.05 0.00 39.82 3.53
106 107 1.457831 GAGCCGGACAGGATAGGGT 60.458 63.158 5.05 0.00 39.82 4.34
107 108 1.457831 AGCCGGACAGGATAGGGTC 60.458 63.158 5.05 0.00 45.00 4.46
108 109 2.857744 GCCGGACAGGATAGGGTCG 61.858 68.421 5.05 0.00 45.00 4.79
109 110 2.728817 CGGACAGGATAGGGTCGC 59.271 66.667 0.00 0.00 34.87 5.19
110 111 2.728817 GGACAGGATAGGGTCGCG 59.271 66.667 0.00 0.00 34.87 5.87
111 112 2.027751 GACAGGATAGGGTCGCGC 59.972 66.667 0.00 0.00 0.00 6.86
112 113 2.758327 ACAGGATAGGGTCGCGCA 60.758 61.111 8.75 0.00 0.00 6.09
113 114 2.028190 CAGGATAGGGTCGCGCAG 59.972 66.667 8.75 0.00 0.00 5.18
114 115 2.442272 AGGATAGGGTCGCGCAGT 60.442 61.111 8.75 0.00 0.00 4.40
115 116 2.279517 GGATAGGGTCGCGCAGTG 60.280 66.667 8.75 0.00 40.84 3.66
116 117 2.279517 GATAGGGTCGCGCAGTGG 60.280 66.667 8.75 0.00 39.32 4.00
117 118 2.758327 ATAGGGTCGCGCAGTGGA 60.758 61.111 8.75 0.00 39.32 4.02
118 119 2.685387 GATAGGGTCGCGCAGTGGAG 62.685 65.000 8.75 0.00 39.32 3.86
120 121 4.681978 GGGTCGCGCAGTGGAGTT 62.682 66.667 8.75 0.00 39.32 3.01
121 122 3.414700 GGTCGCGCAGTGGAGTTG 61.415 66.667 8.75 0.00 39.32 3.16
122 123 3.414700 GTCGCGCAGTGGAGTTGG 61.415 66.667 8.75 0.00 39.32 3.77
126 127 2.662596 CGCAGTGGAGTTGGCCTA 59.337 61.111 3.32 0.00 0.00 3.93
127 128 1.003839 CGCAGTGGAGTTGGCCTAA 60.004 57.895 3.32 0.00 0.00 2.69
128 129 1.298859 CGCAGTGGAGTTGGCCTAAC 61.299 60.000 3.32 7.14 39.65 2.34
129 130 0.960861 GCAGTGGAGTTGGCCTAACC 60.961 60.000 3.32 4.44 40.24 2.85
137 138 4.715523 TGGCCTAACCAGCGGTGC 62.716 66.667 9.63 0.00 46.36 5.01
138 139 4.410400 GGCCTAACCAGCGGTGCT 62.410 66.667 9.63 0.48 40.77 4.40
147 148 2.492090 AGCGGTGCTGATCGAGTC 59.508 61.111 0.00 0.00 37.57 3.36
148 149 2.181777 GCGGTGCTGATCGAGTCA 59.818 61.111 0.00 0.00 35.05 3.41
149 150 1.227089 GCGGTGCTGATCGAGTCAT 60.227 57.895 0.00 0.00 35.97 3.06
150 151 1.211818 GCGGTGCTGATCGAGTCATC 61.212 60.000 0.00 0.00 35.97 2.92
151 152 0.596083 CGGTGCTGATCGAGTCATCC 60.596 60.000 0.00 0.00 35.97 3.51
152 153 0.249657 GGTGCTGATCGAGTCATCCC 60.250 60.000 0.00 0.00 35.97 3.85
153 154 0.596083 GTGCTGATCGAGTCATCCCG 60.596 60.000 0.00 0.00 35.97 5.14
154 155 1.663074 GCTGATCGAGTCATCCCGC 60.663 63.158 0.00 0.00 35.97 6.13
155 156 1.006805 CTGATCGAGTCATCCCGCC 60.007 63.158 0.00 0.00 35.97 6.13
156 157 2.049985 GATCGAGTCATCCCGCCG 60.050 66.667 0.00 0.00 0.00 6.46
157 158 3.559657 GATCGAGTCATCCCGCCGG 62.560 68.421 0.00 0.00 0.00 6.13
159 160 4.570663 CGAGTCATCCCGCCGGTC 62.571 72.222 1.90 0.00 0.00 4.79
179 180 4.413087 GTCGTCAACTATGTGTACTCCAG 58.587 47.826 0.00 0.00 0.00 3.86
181 182 3.522553 GTCAACTATGTGTACTCCAGCC 58.477 50.000 0.00 0.00 0.00 4.85
193 194 4.286032 TGTACTCCAGCCAGTGAACTTTAT 59.714 41.667 0.00 0.00 0.00 1.40
200 201 4.764823 CAGCCAGTGAACTTTATTGGGTAA 59.235 41.667 0.28 0.00 37.53 2.85
341 681 5.487488 TCTGCTTAACTTATCTTTCCCTCCA 59.513 40.000 0.00 0.00 0.00 3.86
342 682 6.158695 TCTGCTTAACTTATCTTTCCCTCCAT 59.841 38.462 0.00 0.00 0.00 3.41
343 683 6.357367 TGCTTAACTTATCTTTCCCTCCATC 58.643 40.000 0.00 0.00 0.00 3.51
344 684 5.765677 GCTTAACTTATCTTTCCCTCCATCC 59.234 44.000 0.00 0.00 0.00 3.51
345 685 4.797912 AACTTATCTTTCCCTCCATCCC 57.202 45.455 0.00 0.00 0.00 3.85
346 686 2.706190 ACTTATCTTTCCCTCCATCCCG 59.294 50.000 0.00 0.00 0.00 5.14
347 687 2.489528 TATCTTTCCCTCCATCCCGT 57.510 50.000 0.00 0.00 0.00 5.28
348 688 1.132500 ATCTTTCCCTCCATCCCGTC 58.868 55.000 0.00 0.00 0.00 4.79
349 689 0.981277 TCTTTCCCTCCATCCCGTCC 60.981 60.000 0.00 0.00 0.00 4.79
350 690 1.984288 CTTTCCCTCCATCCCGTCCC 61.984 65.000 0.00 0.00 0.00 4.46
351 691 2.774322 TTTCCCTCCATCCCGTCCCA 62.774 60.000 0.00 0.00 0.00 4.37
352 692 2.448542 CCCTCCATCCCGTCCCAT 60.449 66.667 0.00 0.00 0.00 4.00
353 693 2.520536 CCCTCCATCCCGTCCCATC 61.521 68.421 0.00 0.00 0.00 3.51
354 694 2.520536 CCTCCATCCCGTCCCATCC 61.521 68.421 0.00 0.00 0.00 3.51
361 701 2.772191 CCGTCCCATCCCATCCCA 60.772 66.667 0.00 0.00 0.00 4.37
449 790 4.541482 GTGCCCATGTGCGCATCG 62.541 66.667 15.91 3.39 41.35 3.84
467 808 0.808453 CGTCCATCCGGCGTTAATGT 60.808 55.000 6.01 0.00 0.00 2.71
468 809 0.935196 GTCCATCCGGCGTTAATGTC 59.065 55.000 6.01 0.00 0.00 3.06
469 810 0.537653 TCCATCCGGCGTTAATGTCA 59.462 50.000 6.01 0.00 0.00 3.58
470 811 0.937304 CCATCCGGCGTTAATGTCAG 59.063 55.000 6.01 0.00 0.00 3.51
471 812 0.937304 CATCCGGCGTTAATGTCAGG 59.063 55.000 6.01 2.33 0.00 3.86
472 813 0.814010 ATCCGGCGTTAATGTCAGGC 60.814 55.000 6.01 0.00 0.00 4.85
473 814 1.449601 CCGGCGTTAATGTCAGGCT 60.450 57.895 6.01 0.00 0.00 4.58
474 815 1.705337 CCGGCGTTAATGTCAGGCTG 61.705 60.000 8.58 8.58 0.00 4.85
475 816 1.705337 CGGCGTTAATGTCAGGCTGG 61.705 60.000 15.73 0.00 0.00 4.85
476 817 0.676782 GGCGTTAATGTCAGGCTGGT 60.677 55.000 15.73 0.00 0.00 4.00
477 818 0.727398 GCGTTAATGTCAGGCTGGTC 59.273 55.000 15.73 9.03 0.00 4.02
478 819 1.943968 GCGTTAATGTCAGGCTGGTCA 60.944 52.381 15.73 14.44 0.00 4.02
479 820 2.632377 CGTTAATGTCAGGCTGGTCAT 58.368 47.619 15.73 16.00 0.00 3.06
480 821 3.792401 CGTTAATGTCAGGCTGGTCATA 58.208 45.455 15.73 3.72 0.00 2.15
481 822 3.804325 CGTTAATGTCAGGCTGGTCATAG 59.196 47.826 15.73 8.59 0.00 2.23
482 823 4.680708 CGTTAATGTCAGGCTGGTCATAGT 60.681 45.833 15.73 8.43 0.00 2.12
483 824 2.996249 ATGTCAGGCTGGTCATAGTG 57.004 50.000 15.73 0.00 0.00 2.74
484 825 0.904649 TGTCAGGCTGGTCATAGTGG 59.095 55.000 15.73 0.00 0.00 4.00
485 826 0.179000 GTCAGGCTGGTCATAGTGGG 59.821 60.000 15.73 0.00 0.00 4.61
486 827 0.042581 TCAGGCTGGTCATAGTGGGA 59.957 55.000 15.73 0.00 0.00 4.37
487 828 0.467384 CAGGCTGGTCATAGTGGGAG 59.533 60.000 6.61 0.00 0.00 4.30
488 829 0.043334 AGGCTGGTCATAGTGGGAGT 59.957 55.000 0.00 0.00 0.00 3.85
489 830 1.291033 AGGCTGGTCATAGTGGGAGTA 59.709 52.381 0.00 0.00 0.00 2.59
490 831 2.116238 GGCTGGTCATAGTGGGAGTAA 58.884 52.381 0.00 0.00 0.00 2.24
491 832 2.158943 GGCTGGTCATAGTGGGAGTAAC 60.159 54.545 0.00 0.00 0.00 2.50
492 833 2.500098 GCTGGTCATAGTGGGAGTAACA 59.500 50.000 0.00 0.00 0.00 2.41
493 834 3.134804 GCTGGTCATAGTGGGAGTAACAT 59.865 47.826 0.00 0.00 0.00 2.71
494 835 4.344102 GCTGGTCATAGTGGGAGTAACATA 59.656 45.833 0.00 0.00 0.00 2.29
495 836 5.509840 GCTGGTCATAGTGGGAGTAACATAG 60.510 48.000 0.00 0.00 0.00 2.23
496 837 4.899457 TGGTCATAGTGGGAGTAACATAGG 59.101 45.833 0.00 0.00 0.00 2.57
497 838 4.900054 GGTCATAGTGGGAGTAACATAGGT 59.100 45.833 0.00 0.00 0.00 3.08
498 839 6.073314 GGTCATAGTGGGAGTAACATAGGTA 58.927 44.000 0.00 0.00 0.00 3.08
499 840 6.208994 GGTCATAGTGGGAGTAACATAGGTAG 59.791 46.154 0.00 0.00 0.00 3.18
500 841 6.776603 GTCATAGTGGGAGTAACATAGGTAGT 59.223 42.308 0.00 0.00 0.00 2.73
501 842 7.941238 GTCATAGTGGGAGTAACATAGGTAGTA 59.059 40.741 0.00 0.00 0.00 1.82
502 843 8.505246 TCATAGTGGGAGTAACATAGGTAGTAA 58.495 37.037 0.00 0.00 0.00 2.24
503 844 8.574737 CATAGTGGGAGTAACATAGGTAGTAAC 58.425 40.741 0.00 0.00 0.00 2.50
504 845 6.496743 AGTGGGAGTAACATAGGTAGTAACA 58.503 40.000 0.00 0.00 0.00 2.41
505 846 7.130775 AGTGGGAGTAACATAGGTAGTAACAT 58.869 38.462 0.00 0.00 0.00 2.71
506 847 8.284435 AGTGGGAGTAACATAGGTAGTAACATA 58.716 37.037 0.00 0.00 0.00 2.29
507 848 8.917088 GTGGGAGTAACATAGGTAGTAACATAA 58.083 37.037 0.00 0.00 0.00 1.90
508 849 9.491406 TGGGAGTAACATAGGTAGTAACATAAA 57.509 33.333 0.00 0.00 0.00 1.40
512 853 9.774413 AGTAACATAGGTAGTAACATAAATGCC 57.226 33.333 0.00 0.00 0.00 4.40
513 854 9.550406 GTAACATAGGTAGTAACATAAATGCCA 57.450 33.333 0.00 0.00 0.00 4.92
514 855 8.446599 AACATAGGTAGTAACATAAATGCCAC 57.553 34.615 0.00 0.00 0.00 5.01
515 856 7.570132 ACATAGGTAGTAACATAAATGCCACA 58.430 34.615 0.00 0.00 0.00 4.17
516 857 8.217799 ACATAGGTAGTAACATAAATGCCACAT 58.782 33.333 0.00 0.00 0.00 3.21
517 858 9.719355 CATAGGTAGTAACATAAATGCCACATA 57.281 33.333 0.00 0.00 0.00 2.29
519 860 8.677148 AGGTAGTAACATAAATGCCACATAAG 57.323 34.615 0.00 0.00 0.00 1.73
520 861 7.228706 AGGTAGTAACATAAATGCCACATAAGC 59.771 37.037 0.00 0.00 0.00 3.09
521 862 7.012894 GGTAGTAACATAAATGCCACATAAGCA 59.987 37.037 0.00 0.00 45.94 3.91
522 863 7.403312 AGTAACATAAATGCCACATAAGCAA 57.597 32.000 0.00 0.00 44.83 3.91
523 864 7.835822 AGTAACATAAATGCCACATAAGCAAA 58.164 30.769 0.00 0.00 44.83 3.68
524 865 8.310382 AGTAACATAAATGCCACATAAGCAAAA 58.690 29.630 0.00 0.00 44.83 2.44
525 866 9.097257 GTAACATAAATGCCACATAAGCAAAAT 57.903 29.630 0.00 0.00 44.83 1.82
526 867 8.564509 AACATAAATGCCACATAAGCAAAATT 57.435 26.923 0.00 0.00 44.83 1.82
527 868 9.664332 AACATAAATGCCACATAAGCAAAATTA 57.336 25.926 0.00 0.00 44.83 1.40
528 869 9.316730 ACATAAATGCCACATAAGCAAAATTAG 57.683 29.630 0.00 0.00 44.83 1.73
529 870 9.316730 CATAAATGCCACATAAGCAAAATTAGT 57.683 29.630 0.00 0.00 44.83 2.24
530 871 7.599630 AAATGCCACATAAGCAAAATTAGTG 57.400 32.000 0.00 0.00 44.83 2.74
531 872 5.973899 TGCCACATAAGCAAAATTAGTGA 57.026 34.783 0.00 0.00 37.28 3.41
532 873 6.528537 TGCCACATAAGCAAAATTAGTGAT 57.471 33.333 0.00 0.00 37.28 3.06
533 874 6.331845 TGCCACATAAGCAAAATTAGTGATG 58.668 36.000 0.00 0.00 37.28 3.07
534 875 6.071447 TGCCACATAAGCAAAATTAGTGATGT 60.071 34.615 0.00 0.00 37.28 3.06
535 876 6.254157 GCCACATAAGCAAAATTAGTGATGTG 59.746 38.462 0.00 0.00 36.43 3.21
536 877 6.753279 CCACATAAGCAAAATTAGTGATGTGG 59.247 38.462 17.77 17.77 45.85 4.17
537 878 6.254157 CACATAAGCAAAATTAGTGATGTGGC 59.746 38.462 0.00 0.00 33.99 5.01
538 879 4.870123 AAGCAAAATTAGTGATGTGGCA 57.130 36.364 0.00 0.00 0.00 4.92
539 880 4.870123 AGCAAAATTAGTGATGTGGCAA 57.130 36.364 0.00 0.00 0.00 4.52
540 881 4.813027 AGCAAAATTAGTGATGTGGCAAG 58.187 39.130 0.00 0.00 0.00 4.01
541 882 4.281688 AGCAAAATTAGTGATGTGGCAAGT 59.718 37.500 0.00 0.00 0.00 3.16
542 883 5.476599 AGCAAAATTAGTGATGTGGCAAGTA 59.523 36.000 0.00 0.00 0.00 2.24
543 884 5.801947 GCAAAATTAGTGATGTGGCAAGTAG 59.198 40.000 0.00 0.00 0.00 2.57
544 885 6.570378 GCAAAATTAGTGATGTGGCAAGTAGT 60.570 38.462 0.00 0.00 0.00 2.73
545 886 7.370383 CAAAATTAGTGATGTGGCAAGTAGTT 58.630 34.615 0.00 0.00 0.00 2.24
546 887 8.511321 CAAAATTAGTGATGTGGCAAGTAGTTA 58.489 33.333 0.00 0.00 0.00 2.24
547 888 8.630054 AAATTAGTGATGTGGCAAGTAGTTAA 57.370 30.769 0.00 0.00 0.00 2.01
548 889 8.807948 AATTAGTGATGTGGCAAGTAGTTAAT 57.192 30.769 0.00 0.00 0.00 1.40
549 890 7.609760 TTAGTGATGTGGCAAGTAGTTAATG 57.390 36.000 0.00 0.00 0.00 1.90
550 891 5.804639 AGTGATGTGGCAAGTAGTTAATGA 58.195 37.500 0.00 0.00 0.00 2.57
551 892 5.877012 AGTGATGTGGCAAGTAGTTAATGAG 59.123 40.000 0.00 0.00 0.00 2.90
552 893 5.065218 GTGATGTGGCAAGTAGTTAATGAGG 59.935 44.000 0.00 0.00 0.00 3.86
553 894 4.901197 TGTGGCAAGTAGTTAATGAGGA 57.099 40.909 0.00 0.00 0.00 3.71
554 895 5.235850 TGTGGCAAGTAGTTAATGAGGAA 57.764 39.130 0.00 0.00 0.00 3.36
555 896 5.626142 TGTGGCAAGTAGTTAATGAGGAAA 58.374 37.500 0.00 0.00 0.00 3.13
556 897 5.705441 TGTGGCAAGTAGTTAATGAGGAAAG 59.295 40.000 0.00 0.00 0.00 2.62
557 898 5.938125 GTGGCAAGTAGTTAATGAGGAAAGA 59.062 40.000 0.00 0.00 0.00 2.52
558 899 6.092807 GTGGCAAGTAGTTAATGAGGAAAGAG 59.907 42.308 0.00 0.00 0.00 2.85
559 900 5.586643 GGCAAGTAGTTAATGAGGAAAGAGG 59.413 44.000 0.00 0.00 0.00 3.69
560 901 5.065346 GCAAGTAGTTAATGAGGAAAGAGGC 59.935 44.000 0.00 0.00 0.00 4.70
561 902 6.173339 CAAGTAGTTAATGAGGAAAGAGGCA 58.827 40.000 0.00 0.00 0.00 4.75
562 903 6.374417 AGTAGTTAATGAGGAAAGAGGCAA 57.626 37.500 0.00 0.00 0.00 4.52
563 904 6.779860 AGTAGTTAATGAGGAAAGAGGCAAA 58.220 36.000 0.00 0.00 0.00 3.68
564 905 7.406104 AGTAGTTAATGAGGAAAGAGGCAAAT 58.594 34.615 0.00 0.00 0.00 2.32
565 906 8.548877 AGTAGTTAATGAGGAAAGAGGCAAATA 58.451 33.333 0.00 0.00 0.00 1.40
566 907 7.872113 AGTTAATGAGGAAAGAGGCAAATAG 57.128 36.000 0.00 0.00 0.00 1.73
567 908 7.633789 AGTTAATGAGGAAAGAGGCAAATAGA 58.366 34.615 0.00 0.00 0.00 1.98
568 909 7.772757 AGTTAATGAGGAAAGAGGCAAATAGAG 59.227 37.037 0.00 0.00 0.00 2.43
569 910 5.707066 ATGAGGAAAGAGGCAAATAGAGT 57.293 39.130 0.00 0.00 0.00 3.24
570 911 6.814954 ATGAGGAAAGAGGCAAATAGAGTA 57.185 37.500 0.00 0.00 0.00 2.59
571 912 6.620877 TGAGGAAAGAGGCAAATAGAGTAA 57.379 37.500 0.00 0.00 0.00 2.24
572 913 6.407202 TGAGGAAAGAGGCAAATAGAGTAAC 58.593 40.000 0.00 0.00 0.00 2.50
573 914 6.013725 TGAGGAAAGAGGCAAATAGAGTAACA 60.014 38.462 0.00 0.00 0.00 2.41
574 915 6.963322 AGGAAAGAGGCAAATAGAGTAACAT 58.037 36.000 0.00 0.00 0.00 2.71
575 916 8.090788 AGGAAAGAGGCAAATAGAGTAACATA 57.909 34.615 0.00 0.00 0.00 2.29
576 917 8.548877 AGGAAAGAGGCAAATAGAGTAACATAA 58.451 33.333 0.00 0.00 0.00 1.90
577 918 9.343539 GGAAAGAGGCAAATAGAGTAACATAAT 57.656 33.333 0.00 0.00 0.00 1.28
596 937 8.479313 ACATAATATGTTACCATCACATAGCG 57.521 34.615 0.00 0.00 41.63 4.26
597 938 7.549134 ACATAATATGTTACCATCACATAGCGG 59.451 37.037 0.00 0.00 41.63 5.52
598 939 3.838244 ATGTTACCATCACATAGCGGT 57.162 42.857 0.00 0.00 32.88 5.68
599 940 3.620427 TGTTACCATCACATAGCGGTT 57.380 42.857 0.00 0.00 32.81 4.44
600 941 3.945346 TGTTACCATCACATAGCGGTTT 58.055 40.909 0.00 0.00 32.81 3.27
601 942 3.936453 TGTTACCATCACATAGCGGTTTC 59.064 43.478 0.00 0.00 32.81 2.78
602 943 2.038387 ACCATCACATAGCGGTTTCC 57.962 50.000 0.00 0.00 0.00 3.13
603 944 1.280710 ACCATCACATAGCGGTTTCCA 59.719 47.619 0.00 0.00 0.00 3.53
604 945 2.290641 ACCATCACATAGCGGTTTCCAA 60.291 45.455 0.00 0.00 0.00 3.53
605 946 2.951642 CCATCACATAGCGGTTTCCAAT 59.048 45.455 0.00 0.00 0.00 3.16
606 947 3.243168 CCATCACATAGCGGTTTCCAATG 60.243 47.826 0.00 0.00 0.00 2.82
607 948 1.742831 TCACATAGCGGTTTCCAATGC 59.257 47.619 0.00 0.00 0.00 3.56
608 949 1.472082 CACATAGCGGTTTCCAATGCA 59.528 47.619 0.00 0.00 0.00 3.96
609 950 2.099592 CACATAGCGGTTTCCAATGCAT 59.900 45.455 0.00 0.00 0.00 3.96
610 951 3.314913 CACATAGCGGTTTCCAATGCATA 59.685 43.478 0.00 0.00 0.00 3.14
611 952 3.951037 ACATAGCGGTTTCCAATGCATAA 59.049 39.130 0.00 0.00 0.00 1.90
612 953 4.584325 ACATAGCGGTTTCCAATGCATAAT 59.416 37.500 0.00 0.00 0.00 1.28
613 954 3.441496 AGCGGTTTCCAATGCATAATG 57.559 42.857 0.00 0.00 0.00 1.90
614 955 3.023119 AGCGGTTTCCAATGCATAATGA 58.977 40.909 0.00 0.00 0.00 2.57
615 956 3.067180 AGCGGTTTCCAATGCATAATGAG 59.933 43.478 0.00 0.00 0.00 2.90
616 957 3.181487 GCGGTTTCCAATGCATAATGAGT 60.181 43.478 0.00 0.00 0.00 3.41
617 958 4.601019 CGGTTTCCAATGCATAATGAGTC 58.399 43.478 0.00 0.00 0.00 3.36
618 959 4.336433 CGGTTTCCAATGCATAATGAGTCT 59.664 41.667 0.00 0.00 0.00 3.24
619 960 5.527214 CGGTTTCCAATGCATAATGAGTCTA 59.473 40.000 0.00 0.00 0.00 2.59
620 961 6.511767 CGGTTTCCAATGCATAATGAGTCTAC 60.512 42.308 0.00 0.00 0.00 2.59
621 962 6.318648 GGTTTCCAATGCATAATGAGTCTACA 59.681 38.462 0.00 0.00 0.00 2.74
622 963 7.148086 GGTTTCCAATGCATAATGAGTCTACAA 60.148 37.037 0.00 0.00 0.00 2.41
623 964 7.936496 TTCCAATGCATAATGAGTCTACAAA 57.064 32.000 0.00 0.00 0.00 2.83
624 965 7.558161 TCCAATGCATAATGAGTCTACAAAG 57.442 36.000 0.00 0.00 0.00 2.77
625 966 7.112122 TCCAATGCATAATGAGTCTACAAAGT 58.888 34.615 0.00 0.00 0.00 2.66
626 967 8.264347 TCCAATGCATAATGAGTCTACAAAGTA 58.736 33.333 0.00 0.00 0.00 2.24
627 968 8.892723 CCAATGCATAATGAGTCTACAAAGTAA 58.107 33.333 0.00 0.00 0.00 2.24
638 979 9.162764 TGAGTCTACAAAGTAATAAATGAAGGC 57.837 33.333 0.00 0.00 0.00 4.35
639 980 9.162764 GAGTCTACAAAGTAATAAATGAAGGCA 57.837 33.333 0.00 0.00 0.00 4.75
640 981 9.515226 AGTCTACAAAGTAATAAATGAAGGCAA 57.485 29.630 0.00 0.00 0.00 4.52
641 982 9.556030 GTCTACAAAGTAATAAATGAAGGCAAC 57.444 33.333 0.00 0.00 0.00 4.17
656 997 3.067684 GGCAACTATGTTACCACACCT 57.932 47.619 0.00 0.00 35.03 4.00
657 998 4.210724 GGCAACTATGTTACCACACCTA 57.789 45.455 0.00 0.00 35.03 3.08
658 999 4.777463 GGCAACTATGTTACCACACCTAT 58.223 43.478 0.00 0.00 35.03 2.57
659 1000 4.574828 GGCAACTATGTTACCACACCTATG 59.425 45.833 0.00 0.00 35.03 2.23
660 1001 5.424757 GCAACTATGTTACCACACCTATGA 58.575 41.667 0.00 0.00 35.03 2.15
661 1002 5.293569 GCAACTATGTTACCACACCTATGAC 59.706 44.000 0.00 0.00 35.03 3.06
662 1003 6.403049 CAACTATGTTACCACACCTATGACA 58.597 40.000 0.00 0.00 35.03 3.58
663 1004 5.974108 ACTATGTTACCACACCTATGACAC 58.026 41.667 0.00 0.00 35.03 3.67
664 1005 5.720041 ACTATGTTACCACACCTATGACACT 59.280 40.000 0.00 0.00 35.03 3.55
665 1006 6.893554 ACTATGTTACCACACCTATGACACTA 59.106 38.462 0.00 0.00 35.03 2.74
666 1007 5.395682 TGTTACCACACCTATGACACTAC 57.604 43.478 0.00 0.00 0.00 2.73
667 1008 4.221262 TGTTACCACACCTATGACACTACC 59.779 45.833 0.00 0.00 0.00 3.18
668 1009 2.185387 ACCACACCTATGACACTACCC 58.815 52.381 0.00 0.00 0.00 3.69
669 1010 2.184533 CCACACCTATGACACTACCCA 58.815 52.381 0.00 0.00 0.00 4.51
670 1011 2.093658 CCACACCTATGACACTACCCAC 60.094 54.545 0.00 0.00 0.00 4.61
671 1012 2.832129 CACACCTATGACACTACCCACT 59.168 50.000 0.00 0.00 0.00 4.00
672 1013 2.832129 ACACCTATGACACTACCCACTG 59.168 50.000 0.00 0.00 0.00 3.66
673 1014 2.832129 CACCTATGACACTACCCACTGT 59.168 50.000 0.00 0.00 0.00 3.55
674 1015 2.832129 ACCTATGACACTACCCACTGTG 59.168 50.000 0.00 0.00 39.80 3.66
675 1016 3.096852 CCTATGACACTACCCACTGTGA 58.903 50.000 9.86 0.00 37.59 3.58
676 1017 3.513912 CCTATGACACTACCCACTGTGAA 59.486 47.826 9.86 0.00 37.59 3.18
677 1018 3.685139 ATGACACTACCCACTGTGAAG 57.315 47.619 9.86 6.32 37.59 3.02
678 1019 1.691976 TGACACTACCCACTGTGAAGG 59.308 52.381 9.86 5.43 37.59 3.46
679 1020 1.692519 GACACTACCCACTGTGAAGGT 59.307 52.381 9.86 11.38 37.59 3.50
680 1021 2.895404 GACACTACCCACTGTGAAGGTA 59.105 50.000 9.86 11.91 37.59 3.08
685 1026 5.934402 CTACCCACTGTGAAGGTAGTAAT 57.066 43.478 23.95 2.54 45.39 1.89
687 1028 7.598759 CTACCCACTGTGAAGGTAGTAATAT 57.401 40.000 23.95 1.45 45.39 1.28
688 1029 8.701908 CTACCCACTGTGAAGGTAGTAATATA 57.298 38.462 23.95 4.07 45.39 0.86
689 1030 7.598759 ACCCACTGTGAAGGTAGTAATATAG 57.401 40.000 9.86 0.00 30.13 1.31
690 1031 7.359849 ACCCACTGTGAAGGTAGTAATATAGA 58.640 38.462 9.86 0.00 30.13 1.98
691 1032 7.287235 ACCCACTGTGAAGGTAGTAATATAGAC 59.713 40.741 9.86 0.00 30.13 2.59
692 1033 7.506261 CCCACTGTGAAGGTAGTAATATAGACT 59.494 40.741 9.86 0.00 0.00 3.24
693 1034 9.570468 CCACTGTGAAGGTAGTAATATAGACTA 57.430 37.037 9.86 0.00 0.00 2.59
731 1072 8.558973 TGTTACTAGTCTAAGTTACTCTCCAC 57.441 38.462 0.00 0.00 31.82 4.02
732 1073 8.381636 TGTTACTAGTCTAAGTTACTCTCCACT 58.618 37.037 0.00 0.00 31.82 4.00
733 1074 9.883142 GTTACTAGTCTAAGTTACTCTCCACTA 57.117 37.037 0.00 0.00 0.00 2.74
735 1076 8.967664 ACTAGTCTAAGTTACTCTCCACTATG 57.032 38.462 0.00 0.00 0.00 2.23
736 1077 8.770322 ACTAGTCTAAGTTACTCTCCACTATGA 58.230 37.037 0.00 0.00 0.00 2.15
737 1078 7.868906 AGTCTAAGTTACTCTCCACTATGAC 57.131 40.000 0.00 0.00 0.00 3.06
738 1079 6.829811 AGTCTAAGTTACTCTCCACTATGACC 59.170 42.308 0.00 0.00 31.22 4.02
739 1080 6.602406 GTCTAAGTTACTCTCCACTATGACCA 59.398 42.308 0.00 0.00 0.00 4.02
740 1081 5.923733 AAGTTACTCTCCACTATGACCAG 57.076 43.478 0.00 0.00 0.00 4.00
741 1082 3.702045 AGTTACTCTCCACTATGACCAGC 59.298 47.826 0.00 0.00 0.00 4.85
742 1083 1.490574 ACTCTCCACTATGACCAGCC 58.509 55.000 0.00 0.00 0.00 4.85
813 1154 2.520741 CCTCTCCTCTCTCCGCCC 60.521 72.222 0.00 0.00 0.00 6.13
868 1214 2.503331 CGCACCTCCATGCCATATTTA 58.497 47.619 0.00 0.00 42.99 1.40
878 1224 7.616935 CCTCCATGCCATATTTATTACTCCAAT 59.383 37.037 0.00 0.00 0.00 3.16
1122 1522 4.357947 GACGACAGCGGCTGGACA 62.358 66.667 31.38 0.00 43.91 4.02
1283 1683 1.371183 CAGGCACCGAGGAGAACAA 59.629 57.895 0.00 0.00 0.00 2.83
1397 1806 2.027561 TGCAGGTACGCTTACTCCATTT 60.028 45.455 0.00 0.00 0.00 2.32
1398 1807 3.196039 TGCAGGTACGCTTACTCCATTTA 59.804 43.478 0.00 0.00 0.00 1.40
1399 1808 4.186159 GCAGGTACGCTTACTCCATTTAA 58.814 43.478 0.00 0.00 0.00 1.52
1400 1809 4.270325 GCAGGTACGCTTACTCCATTTAAG 59.730 45.833 0.00 0.00 0.00 1.85
1488 1897 5.702670 GTGTCCTCTCTCATGAACAAATCAA 59.297 40.000 0.00 0.00 42.54 2.57
1529 1938 8.768019 TCTCAAATATTCATCAGTATGCTTTCG 58.232 33.333 0.00 0.00 34.76 3.46
1588 1997 1.406898 TGTGAGCAGAGATCATCGTCC 59.593 52.381 0.00 0.00 28.52 4.79
1766 2184 5.537295 TGTGTAGTTCTTCTACCTTAGTGCA 59.463 40.000 3.15 0.00 45.99 4.57
1767 2185 6.041182 TGTGTAGTTCTTCTACCTTAGTGCAA 59.959 38.462 0.00 0.00 45.99 4.08
1773 2191 8.376270 AGTTCTTCTACCTTAGTGCAAGTTTAT 58.624 33.333 0.00 0.00 31.77 1.40
1890 2308 2.798680 CTGCTGTAGCTTGTACTACCG 58.201 52.381 5.38 0.00 41.57 4.02
1912 2330 4.760204 CGGTTTGACAAATTTCTACTCCCT 59.240 41.667 3.49 0.00 0.00 4.20
1917 2335 4.182339 GACAAATTTCTACTCCCTCCGTC 58.818 47.826 0.00 0.00 0.00 4.79
1918 2336 3.055312 ACAAATTTCTACTCCCTCCGTCC 60.055 47.826 0.00 0.00 0.00 4.79
1919 2337 1.790818 ATTTCTACTCCCTCCGTCCC 58.209 55.000 0.00 0.00 0.00 4.46
1920 2338 0.682209 TTTCTACTCCCTCCGTCCCG 60.682 60.000 0.00 0.00 0.00 5.14
1955 2373 3.243234 CGAAGAGAGTAGCGTTGATGGAT 60.243 47.826 0.00 0.00 0.00 3.41
1985 2404 9.893305 TTTTCTCCGAAAAACTTTCATCTATTC 57.107 29.630 0.00 0.00 0.00 1.75
1986 2405 8.615878 TTCTCCGAAAAACTTTCATCTATTCA 57.384 30.769 0.52 0.00 0.00 2.57
1987 2406 8.792830 TCTCCGAAAAACTTTCATCTATTCAT 57.207 30.769 0.52 0.00 0.00 2.57
1988 2407 8.883731 TCTCCGAAAAACTTTCATCTATTCATC 58.116 33.333 0.52 0.00 0.00 2.92
1989 2408 8.560355 TCCGAAAAACTTTCATCTATTCATCA 57.440 30.769 0.52 0.00 0.00 3.07
1990 2409 9.008965 TCCGAAAAACTTTCATCTATTCATCAA 57.991 29.630 0.52 0.00 0.00 2.57
1991 2410 9.065871 CCGAAAAACTTTCATCTATTCATCAAC 57.934 33.333 0.52 0.00 0.00 3.18
1992 2411 8.779561 CGAAAAACTTTCATCTATTCATCAACG 58.220 33.333 0.52 0.00 0.00 4.10
1993 2412 8.970691 AAAAACTTTCATCTATTCATCAACGG 57.029 30.769 0.00 0.00 0.00 4.44
1994 2413 7.687941 AAACTTTCATCTATTCATCAACGGT 57.312 32.000 0.00 0.00 0.00 4.83
1995 2414 6.910536 ACTTTCATCTATTCATCAACGGTC 57.089 37.500 0.00 0.00 0.00 4.79
1996 2415 6.406370 ACTTTCATCTATTCATCAACGGTCA 58.594 36.000 0.00 0.00 0.00 4.02
1997 2416 6.878923 ACTTTCATCTATTCATCAACGGTCAA 59.121 34.615 0.00 0.00 0.00 3.18
1998 2417 6.662414 TTCATCTATTCATCAACGGTCAAC 57.338 37.500 0.00 0.00 0.00 3.18
1999 2418 5.977635 TCATCTATTCATCAACGGTCAACT 58.022 37.500 0.00 0.00 0.00 3.16
2000 2419 5.812127 TCATCTATTCATCAACGGTCAACTG 59.188 40.000 0.00 0.00 0.00 3.16
2001 2420 5.147330 TCTATTCATCAACGGTCAACTGT 57.853 39.130 0.00 0.00 36.96 3.55
2002 2421 5.168569 TCTATTCATCAACGGTCAACTGTC 58.831 41.667 0.00 0.00 33.61 3.51
2003 2422 2.900716 TCATCAACGGTCAACTGTCA 57.099 45.000 0.00 0.00 33.61 3.58
2004 2423 3.186702 TCATCAACGGTCAACTGTCAA 57.813 42.857 0.00 0.00 33.61 3.18
2005 2424 2.869801 TCATCAACGGTCAACTGTCAAC 59.130 45.455 0.00 0.00 33.61 3.18
2006 2425 1.282817 TCAACGGTCAACTGTCAACG 58.717 50.000 0.00 0.00 33.61 4.10
2007 2426 1.003851 CAACGGTCAACTGTCAACGT 58.996 50.000 0.00 0.00 33.61 3.99
2008 2427 2.159268 TCAACGGTCAACTGTCAACGTA 60.159 45.455 3.54 0.00 33.61 3.57
2009 2428 2.129823 ACGGTCAACTGTCAACGTAG 57.870 50.000 1.32 0.00 32.30 3.51
2010 2429 2.159198 AACGGTCAACTGTCAACGTAGT 60.159 45.455 3.54 0.00 36.91 2.73
2011 2430 1.784856 CGGTCAACTGTCAACGTAGTG 59.215 52.381 0.00 0.00 45.00 2.74
2012 2431 2.542205 CGGTCAACTGTCAACGTAGTGA 60.542 50.000 0.00 0.00 45.00 3.41
2013 2432 3.650139 GGTCAACTGTCAACGTAGTGAT 58.350 45.455 0.00 0.00 45.00 3.06
2014 2433 3.428870 GGTCAACTGTCAACGTAGTGATG 59.571 47.826 0.00 0.00 45.00 3.07
2015 2434 3.057019 TCAACTGTCAACGTAGTGATGC 58.943 45.455 0.00 0.00 45.00 3.91
2016 2435 2.799978 CAACTGTCAACGTAGTGATGCA 59.200 45.455 0.00 0.00 45.00 3.96
2017 2436 2.677199 ACTGTCAACGTAGTGATGCAG 58.323 47.619 0.00 6.40 45.00 4.41
2018 2437 2.296190 ACTGTCAACGTAGTGATGCAGA 59.704 45.455 12.36 0.00 45.00 4.26
2019 2438 2.919859 CTGTCAACGTAGTGATGCAGAG 59.080 50.000 0.00 0.00 45.00 3.35
2020 2439 2.263077 GTCAACGTAGTGATGCAGAGG 58.737 52.381 0.00 0.00 45.00 3.69
2021 2440 1.002366 CAACGTAGTGATGCAGAGGC 58.998 55.000 0.00 0.00 45.00 4.70
2022 2441 0.898320 AACGTAGTGATGCAGAGGCT 59.102 50.000 0.00 0.00 45.00 4.58
2023 2442 0.174389 ACGTAGTGATGCAGAGGCTG 59.826 55.000 0.00 0.00 42.51 4.85
2024 2443 0.529337 CGTAGTGATGCAGAGGCTGG 60.529 60.000 0.00 0.00 41.91 4.85
2025 2444 0.179062 GTAGTGATGCAGAGGCTGGG 60.179 60.000 0.00 0.00 41.91 4.45
2026 2445 1.340399 TAGTGATGCAGAGGCTGGGG 61.340 60.000 0.00 0.00 41.91 4.96
2027 2446 2.611800 TGATGCAGAGGCTGGGGT 60.612 61.111 0.00 0.00 41.91 4.95
2028 2447 1.306911 TGATGCAGAGGCTGGGGTA 60.307 57.895 0.00 0.00 41.91 3.69
2029 2448 0.913934 TGATGCAGAGGCTGGGGTAA 60.914 55.000 0.00 0.00 41.91 2.85
2030 2449 0.255890 GATGCAGAGGCTGGGGTAAA 59.744 55.000 0.00 0.00 41.91 2.01
2031 2450 0.704076 ATGCAGAGGCTGGGGTAAAA 59.296 50.000 0.00 0.00 41.91 1.52
2032 2451 0.251165 TGCAGAGGCTGGGGTAAAAC 60.251 55.000 0.00 0.00 41.91 2.43
2033 2452 0.965866 GCAGAGGCTGGGGTAAAACC 60.966 60.000 0.00 0.00 35.55 3.27
2074 2494 8.831000 AAAACTGTCAACGTAGTACAAAAATC 57.169 30.769 0.38 0.00 45.00 2.17
2178 2600 2.362120 GTCCCTCCCTCGTCGGAA 60.362 66.667 0.00 0.00 33.16 4.30
2199 2621 4.295857 ACCGGACAAACATTGTTGTAAC 57.704 40.909 9.46 1.04 45.52 2.50
2210 2632 3.804786 TTGTTGTAACAGACAGTCGGA 57.195 42.857 7.80 0.00 39.88 4.55
2509 2942 1.916651 CTCGTCTTCTTGAGCATGTCG 59.083 52.381 0.00 0.00 0.00 4.35
2596 3032 2.189499 GCGCCTCCATGGTCCAATC 61.189 63.158 12.58 0.00 38.35 2.67
2604 3044 4.762016 TGGTCCAATCACCATGGC 57.238 55.556 13.04 0.00 41.84 4.40
2623 3066 2.125106 GATGAGGTGGACCGGTGC 60.125 66.667 20.69 20.69 42.08 5.01
2624 3067 2.607750 ATGAGGTGGACCGGTGCT 60.608 61.111 27.28 6.88 42.08 4.40
2626 3069 3.311110 GAGGTGGACCGGTGCTGA 61.311 66.667 27.28 4.60 42.08 4.26
2638 3081 2.653115 TGCTGACGCAGGTGAGAG 59.347 61.111 8.57 0.00 42.25 3.20
2639 3082 2.125753 GCTGACGCAGGTGAGAGG 60.126 66.667 8.57 0.00 35.78 3.69
2640 3083 2.125753 CTGACGCAGGTGAGAGGC 60.126 66.667 0.00 0.00 27.44 4.70
2641 3084 2.917227 TGACGCAGGTGAGAGGCA 60.917 61.111 0.00 0.00 0.00 4.75
2642 3085 2.125753 GACGCAGGTGAGAGGCAG 60.126 66.667 0.00 0.00 0.00 4.85
2643 3086 3.655810 GACGCAGGTGAGAGGCAGG 62.656 68.421 0.00 0.00 0.00 4.85
2644 3087 4.463879 CGCAGGTGAGAGGCAGGG 62.464 72.222 0.00 0.00 0.00 4.45
2645 3088 3.005539 GCAGGTGAGAGGCAGGGA 61.006 66.667 0.00 0.00 0.00 4.20
2646 3089 2.596851 GCAGGTGAGAGGCAGGGAA 61.597 63.158 0.00 0.00 0.00 3.97
2647 3090 1.919600 GCAGGTGAGAGGCAGGGAAT 61.920 60.000 0.00 0.00 0.00 3.01
2648 3091 0.179936 CAGGTGAGAGGCAGGGAATC 59.820 60.000 0.00 0.00 0.00 2.52
2649 3092 0.985490 AGGTGAGAGGCAGGGAATCC 60.985 60.000 0.00 0.00 0.00 3.01
2650 3093 1.529309 GTGAGAGGCAGGGAATCCC 59.471 63.158 11.16 11.16 45.90 3.85
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
12 13 2.607631 TAAATGTCCGGATTCCGTCC 57.392 50.000 22.83 13.25 46.80 4.79
13 14 3.064931 GGATAAATGTCCGGATTCCGTC 58.935 50.000 22.83 15.53 46.80 4.79
14 15 3.121738 GGATAAATGTCCGGATTCCGT 57.878 47.619 22.83 6.62 46.80 4.69
23 24 2.357952 GGCCTCAAACGGATAAATGTCC 59.642 50.000 0.00 0.00 34.82 4.02
24 25 2.031683 CGGCCTCAAACGGATAAATGTC 59.968 50.000 0.00 0.00 0.00 3.06
25 26 2.014128 CGGCCTCAAACGGATAAATGT 58.986 47.619 0.00 0.00 0.00 2.71
26 27 2.014128 ACGGCCTCAAACGGATAAATG 58.986 47.619 0.00 0.00 0.00 2.32
27 28 2.014128 CACGGCCTCAAACGGATAAAT 58.986 47.619 0.00 0.00 0.00 1.40
28 29 1.444836 CACGGCCTCAAACGGATAAA 58.555 50.000 0.00 0.00 0.00 1.40
29 30 1.022451 GCACGGCCTCAAACGGATAA 61.022 55.000 0.00 0.00 0.00 1.75
30 31 1.448893 GCACGGCCTCAAACGGATA 60.449 57.895 0.00 0.00 0.00 2.59
31 32 2.746277 GCACGGCCTCAAACGGAT 60.746 61.111 0.00 0.00 0.00 4.18
61 62 8.865001 CGTCTGTTTGGAATAAAAAGACAAAAA 58.135 29.630 17.89 0.00 33.43 1.94
62 63 7.489757 CCGTCTGTTTGGAATAAAAAGACAAAA 59.510 33.333 17.89 0.00 33.43 2.44
63 64 6.975772 CCGTCTGTTTGGAATAAAAAGACAAA 59.024 34.615 17.89 0.00 32.60 2.83
64 65 6.319152 TCCGTCTGTTTGGAATAAAAAGACAA 59.681 34.615 17.89 6.95 32.60 3.18
65 66 5.823570 TCCGTCTGTTTGGAATAAAAAGACA 59.176 36.000 17.89 2.55 32.60 3.41
66 67 6.308371 TCCGTCTGTTTGGAATAAAAAGAC 57.692 37.500 11.05 11.05 31.31 3.01
67 68 5.048991 GCTCCGTCTGTTTGGAATAAAAAGA 60.049 40.000 0.00 0.00 32.89 2.52
68 69 5.154222 GCTCCGTCTGTTTGGAATAAAAAG 58.846 41.667 0.00 0.00 32.89 2.27
69 70 4.022676 GGCTCCGTCTGTTTGGAATAAAAA 60.023 41.667 0.00 0.00 32.89 1.94
70 71 3.504520 GGCTCCGTCTGTTTGGAATAAAA 59.495 43.478 0.00 0.00 32.89 1.52
71 72 3.078837 GGCTCCGTCTGTTTGGAATAAA 58.921 45.455 0.00 0.00 32.89 1.40
72 73 2.706890 GGCTCCGTCTGTTTGGAATAA 58.293 47.619 0.00 0.00 32.89 1.40
73 74 1.404986 CGGCTCCGTCTGTTTGGAATA 60.405 52.381 0.00 0.00 32.89 1.75
74 75 0.673644 CGGCTCCGTCTGTTTGGAAT 60.674 55.000 0.00 0.00 32.89 3.01
75 76 1.301401 CGGCTCCGTCTGTTTGGAA 60.301 57.895 0.00 0.00 32.89 3.53
76 77 2.342279 CGGCTCCGTCTGTTTGGA 59.658 61.111 0.00 0.00 34.35 3.53
77 78 2.742372 CCGGCTCCGTCTGTTTGG 60.742 66.667 7.59 0.00 37.81 3.28
78 79 2.027625 GTCCGGCTCCGTCTGTTTG 61.028 63.158 7.59 0.00 37.81 2.93
79 80 2.342648 GTCCGGCTCCGTCTGTTT 59.657 61.111 7.59 0.00 37.81 2.83
80 81 2.915659 TGTCCGGCTCCGTCTGTT 60.916 61.111 7.59 0.00 37.81 3.16
81 82 3.374402 CTGTCCGGCTCCGTCTGT 61.374 66.667 7.59 0.00 37.81 3.41
82 83 4.135153 CCTGTCCGGCTCCGTCTG 62.135 72.222 7.59 4.57 37.81 3.51
83 84 2.280404 TATCCTGTCCGGCTCCGTCT 62.280 60.000 7.59 0.00 37.81 4.18
84 85 1.797211 CTATCCTGTCCGGCTCCGTC 61.797 65.000 7.59 1.20 37.81 4.79
85 86 1.828660 CTATCCTGTCCGGCTCCGT 60.829 63.158 7.59 0.00 37.81 4.69
86 87 2.565645 CCTATCCTGTCCGGCTCCG 61.566 68.421 0.00 0.48 39.44 4.63
87 88 2.210711 CCCTATCCTGTCCGGCTCC 61.211 68.421 0.00 0.00 0.00 4.70
88 89 1.457831 ACCCTATCCTGTCCGGCTC 60.458 63.158 0.00 0.00 0.00 4.70
89 90 1.457831 GACCCTATCCTGTCCGGCT 60.458 63.158 0.00 0.00 0.00 5.52
90 91 2.857744 CGACCCTATCCTGTCCGGC 61.858 68.421 0.00 0.00 0.00 6.13
91 92 2.857744 GCGACCCTATCCTGTCCGG 61.858 68.421 0.00 0.00 0.00 5.14
92 93 2.728817 GCGACCCTATCCTGTCCG 59.271 66.667 0.00 0.00 0.00 4.79
93 94 2.728817 CGCGACCCTATCCTGTCC 59.271 66.667 0.00 0.00 0.00 4.02
94 95 2.027751 GCGCGACCCTATCCTGTC 59.972 66.667 12.10 0.00 0.00 3.51
95 96 2.758327 TGCGCGACCCTATCCTGT 60.758 61.111 12.10 0.00 0.00 4.00
96 97 2.028190 CTGCGCGACCCTATCCTG 59.972 66.667 12.10 0.00 0.00 3.86
97 98 2.442272 ACTGCGCGACCCTATCCT 60.442 61.111 12.10 0.00 0.00 3.24
98 99 2.279517 CACTGCGCGACCCTATCC 60.280 66.667 12.10 0.00 0.00 2.59
99 100 2.279517 CCACTGCGCGACCCTATC 60.280 66.667 12.10 0.00 0.00 2.08
100 101 2.758327 TCCACTGCGCGACCCTAT 60.758 61.111 12.10 0.00 0.00 2.57
101 102 3.449227 CTCCACTGCGCGACCCTA 61.449 66.667 12.10 0.00 0.00 3.53
103 104 4.681978 AACTCCACTGCGCGACCC 62.682 66.667 12.10 0.00 0.00 4.46
104 105 3.414700 CAACTCCACTGCGCGACC 61.415 66.667 12.10 0.00 0.00 4.79
105 106 3.414700 CCAACTCCACTGCGCGAC 61.415 66.667 12.10 0.88 0.00 5.19
108 109 3.605749 TAGGCCAACTCCACTGCGC 62.606 63.158 5.01 0.00 0.00 6.09
109 110 1.003839 TTAGGCCAACTCCACTGCG 60.004 57.895 5.01 0.00 0.00 5.18
110 111 0.960861 GGTTAGGCCAACTCCACTGC 60.961 60.000 5.01 0.00 37.30 4.40
111 112 0.400213 TGGTTAGGCCAACTCCACTG 59.600 55.000 5.01 0.00 45.94 3.66
112 113 2.862780 TGGTTAGGCCAACTCCACT 58.137 52.632 5.01 0.00 45.94 4.00
120 121 4.715523 GCACCGCTGGTTAGGCCA 62.716 66.667 5.01 0.00 46.95 5.36
121 122 4.410400 AGCACCGCTGGTTAGGCC 62.410 66.667 0.00 0.00 37.57 5.19
130 131 1.670949 ATGACTCGATCAGCACCGCT 61.671 55.000 0.00 0.00 41.91 5.52
131 132 1.211818 GATGACTCGATCAGCACCGC 61.212 60.000 7.82 0.00 43.60 5.68
132 133 0.596083 GGATGACTCGATCAGCACCG 60.596 60.000 12.76 0.00 46.10 4.94
133 134 0.249657 GGGATGACTCGATCAGCACC 60.250 60.000 12.76 8.90 46.10 5.01
134 135 0.596083 CGGGATGACTCGATCAGCAC 60.596 60.000 12.76 9.35 46.10 4.40
135 136 1.735973 CGGGATGACTCGATCAGCA 59.264 57.895 12.76 0.00 46.10 4.41
136 137 1.663074 GCGGGATGACTCGATCAGC 60.663 63.158 0.00 5.02 43.41 4.26
137 138 1.006805 GGCGGGATGACTCGATCAG 60.007 63.158 0.00 0.00 43.41 2.90
138 139 2.845550 CGGCGGGATGACTCGATCA 61.846 63.158 0.00 0.00 43.41 2.92
139 140 2.049985 CGGCGGGATGACTCGATC 60.050 66.667 0.00 0.00 43.41 3.69
140 141 3.606662 CCGGCGGGATGACTCGAT 61.607 66.667 20.56 0.00 43.41 3.59
142 143 4.570663 GACCGGCGGGATGACTCG 62.571 72.222 31.78 1.05 43.59 4.18
143 144 4.570663 CGACCGGCGGGATGACTC 62.571 72.222 31.78 16.27 36.97 3.36
145 146 4.867599 GACGACCGGCGGGATGAC 62.868 72.222 31.78 15.28 46.49 3.06
147 148 4.444838 TTGACGACCGGCGGGATG 62.445 66.667 31.78 20.91 46.49 3.51
148 149 4.446413 GTTGACGACCGGCGGGAT 62.446 66.667 31.78 15.17 46.49 3.85
150 151 3.072486 ATAGTTGACGACCGGCGGG 62.072 63.158 31.78 16.15 46.49 6.13
151 152 1.876714 CATAGTTGACGACCGGCGG 60.877 63.158 27.06 27.06 46.49 6.13
153 154 0.389426 ACACATAGTTGACGACCGGC 60.389 55.000 0.00 0.00 0.00 6.13
154 155 2.163010 AGTACACATAGTTGACGACCGG 59.837 50.000 0.00 0.00 0.00 5.28
155 156 3.423571 GAGTACACATAGTTGACGACCG 58.576 50.000 0.00 0.00 0.00 4.79
156 157 3.192001 TGGAGTACACATAGTTGACGACC 59.808 47.826 0.00 0.00 0.00 4.79
157 158 4.413087 CTGGAGTACACATAGTTGACGAC 58.587 47.826 0.00 0.00 0.00 4.34
158 159 3.119602 GCTGGAGTACACATAGTTGACGA 60.120 47.826 0.00 0.00 0.00 4.20
159 160 3.179830 GCTGGAGTACACATAGTTGACG 58.820 50.000 0.00 0.00 0.00 4.35
179 180 4.157840 CCTTACCCAATAAAGTTCACTGGC 59.842 45.833 0.00 0.00 0.00 4.85
181 182 4.142687 CGCCTTACCCAATAAAGTTCACTG 60.143 45.833 0.00 0.00 0.00 3.66
193 194 0.392461 CTGCTAAGCGCCTTACCCAA 60.392 55.000 2.29 0.00 38.05 4.12
200 201 0.826715 TCTTCATCTGCTAAGCGCCT 59.173 50.000 2.29 0.00 38.05 5.52
210 211 4.566545 ACTAGCTCGTCATCTTCATCTG 57.433 45.455 0.00 0.00 0.00 2.90
341 681 1.847968 GGATGGGATGGGACGGGAT 60.848 63.158 0.00 0.00 0.00 3.85
342 682 2.447765 GGATGGGATGGGACGGGA 60.448 66.667 0.00 0.00 0.00 5.14
343 683 3.570212 GGGATGGGATGGGACGGG 61.570 72.222 0.00 0.00 0.00 5.28
344 684 2.129555 GATGGGATGGGATGGGACGG 62.130 65.000 0.00 0.00 0.00 4.79
345 685 1.376466 GATGGGATGGGATGGGACG 59.624 63.158 0.00 0.00 0.00 4.79
346 686 1.067762 TGGATGGGATGGGATGGGAC 61.068 60.000 0.00 0.00 0.00 4.46
347 687 0.103228 ATGGATGGGATGGGATGGGA 60.103 55.000 0.00 0.00 0.00 4.37
348 688 0.333993 GATGGATGGGATGGGATGGG 59.666 60.000 0.00 0.00 0.00 4.00
349 689 0.333993 GGATGGATGGGATGGGATGG 59.666 60.000 0.00 0.00 0.00 3.51
350 690 1.078115 TGGATGGATGGGATGGGATG 58.922 55.000 0.00 0.00 0.00 3.51
351 691 1.644337 CATGGATGGATGGGATGGGAT 59.356 52.381 0.00 0.00 0.00 3.85
352 692 1.078115 CATGGATGGATGGGATGGGA 58.922 55.000 0.00 0.00 0.00 4.37
353 693 3.683885 CATGGATGGATGGGATGGG 57.316 57.895 0.00 0.00 0.00 4.00
449 790 0.935196 GACATTAACGCCGGATGGAC 59.065 55.000 5.05 0.00 37.49 4.02
467 808 0.042581 TCCCACTATGACCAGCCTGA 59.957 55.000 0.00 0.00 0.00 3.86
468 809 0.467384 CTCCCACTATGACCAGCCTG 59.533 60.000 0.00 0.00 0.00 4.85
469 810 0.043334 ACTCCCACTATGACCAGCCT 59.957 55.000 0.00 0.00 0.00 4.58
470 811 1.789523 TACTCCCACTATGACCAGCC 58.210 55.000 0.00 0.00 0.00 4.85
471 812 2.500098 TGTTACTCCCACTATGACCAGC 59.500 50.000 0.00 0.00 0.00 4.85
472 813 5.011125 CCTATGTTACTCCCACTATGACCAG 59.989 48.000 0.00 0.00 0.00 4.00
473 814 4.899457 CCTATGTTACTCCCACTATGACCA 59.101 45.833 0.00 0.00 0.00 4.02
474 815 4.900054 ACCTATGTTACTCCCACTATGACC 59.100 45.833 0.00 0.00 0.00 4.02
475 816 6.776603 ACTACCTATGTTACTCCCACTATGAC 59.223 42.308 0.00 0.00 0.00 3.06
476 817 6.919158 ACTACCTATGTTACTCCCACTATGA 58.081 40.000 0.00 0.00 0.00 2.15
477 818 8.574737 GTTACTACCTATGTTACTCCCACTATG 58.425 40.741 0.00 0.00 0.00 2.23
478 819 8.284435 TGTTACTACCTATGTTACTCCCACTAT 58.716 37.037 0.00 0.00 0.00 2.12
479 820 7.642186 TGTTACTACCTATGTTACTCCCACTA 58.358 38.462 0.00 0.00 0.00 2.74
480 821 6.496743 TGTTACTACCTATGTTACTCCCACT 58.503 40.000 0.00 0.00 0.00 4.00
481 822 6.780457 TGTTACTACCTATGTTACTCCCAC 57.220 41.667 0.00 0.00 0.00 4.61
482 823 9.491406 TTTATGTTACTACCTATGTTACTCCCA 57.509 33.333 0.00 0.00 0.00 4.37
486 827 9.774413 GGCATTTATGTTACTACCTATGTTACT 57.226 33.333 0.00 0.00 0.00 2.24
487 828 9.550406 TGGCATTTATGTTACTACCTATGTTAC 57.450 33.333 0.00 0.00 0.00 2.50
488 829 9.550406 GTGGCATTTATGTTACTACCTATGTTA 57.450 33.333 0.00 0.00 0.00 2.41
489 830 8.050325 TGTGGCATTTATGTTACTACCTATGTT 58.950 33.333 0.00 0.00 0.00 2.71
490 831 7.570132 TGTGGCATTTATGTTACTACCTATGT 58.430 34.615 0.00 0.00 0.00 2.29
491 832 8.621532 ATGTGGCATTTATGTTACTACCTATG 57.378 34.615 0.00 0.00 0.00 2.23
493 834 9.772973 CTTATGTGGCATTTATGTTACTACCTA 57.227 33.333 0.00 0.00 0.00 3.08
494 835 7.228706 GCTTATGTGGCATTTATGTTACTACCT 59.771 37.037 0.00 0.00 0.00 3.08
495 836 7.012894 TGCTTATGTGGCATTTATGTTACTACC 59.987 37.037 0.00 0.00 34.56 3.18
496 837 7.925993 TGCTTATGTGGCATTTATGTTACTAC 58.074 34.615 0.00 0.00 34.56 2.73
497 838 8.512966 TTGCTTATGTGGCATTTATGTTACTA 57.487 30.769 0.00 0.00 39.54 1.82
498 839 7.403312 TTGCTTATGTGGCATTTATGTTACT 57.597 32.000 0.00 0.00 39.54 2.24
499 840 8.472683 TTTTGCTTATGTGGCATTTATGTTAC 57.527 30.769 0.00 0.00 39.54 2.50
500 841 9.664332 AATTTTGCTTATGTGGCATTTATGTTA 57.336 25.926 0.00 0.00 39.54 2.41
501 842 8.564509 AATTTTGCTTATGTGGCATTTATGTT 57.435 26.923 0.00 0.00 39.54 2.71
502 843 9.316730 CTAATTTTGCTTATGTGGCATTTATGT 57.683 29.630 0.00 0.00 39.54 2.29
503 844 9.316730 ACTAATTTTGCTTATGTGGCATTTATG 57.683 29.630 0.00 0.00 39.54 1.90
504 845 9.316730 CACTAATTTTGCTTATGTGGCATTTAT 57.683 29.630 0.00 0.00 39.54 1.40
505 846 8.526978 TCACTAATTTTGCTTATGTGGCATTTA 58.473 29.630 0.00 0.00 39.54 1.40
506 847 7.385267 TCACTAATTTTGCTTATGTGGCATTT 58.615 30.769 0.00 0.00 39.54 2.32
507 848 6.934056 TCACTAATTTTGCTTATGTGGCATT 58.066 32.000 0.00 0.00 39.54 3.56
508 849 6.528537 TCACTAATTTTGCTTATGTGGCAT 57.471 33.333 0.00 0.00 39.54 4.40
509 850 5.973899 TCACTAATTTTGCTTATGTGGCA 57.026 34.783 0.00 0.00 37.97 4.92
510 851 6.254157 CACATCACTAATTTTGCTTATGTGGC 59.746 38.462 0.00 0.00 39.34 5.01
511 852 7.745022 CACATCACTAATTTTGCTTATGTGG 57.255 36.000 0.00 0.00 39.34 4.17
512 853 6.254157 GCCACATCACTAATTTTGCTTATGTG 59.746 38.462 0.00 0.00 41.50 3.21
513 854 6.071447 TGCCACATCACTAATTTTGCTTATGT 60.071 34.615 0.00 0.00 0.00 2.29
514 855 6.331845 TGCCACATCACTAATTTTGCTTATG 58.668 36.000 0.00 0.00 0.00 1.90
515 856 6.528537 TGCCACATCACTAATTTTGCTTAT 57.471 33.333 0.00 0.00 0.00 1.73
516 857 5.973899 TGCCACATCACTAATTTTGCTTA 57.026 34.783 0.00 0.00 0.00 3.09
517 858 4.870123 TGCCACATCACTAATTTTGCTT 57.130 36.364 0.00 0.00 0.00 3.91
518 859 4.281688 ACTTGCCACATCACTAATTTTGCT 59.718 37.500 0.00 0.00 0.00 3.91
519 860 4.559153 ACTTGCCACATCACTAATTTTGC 58.441 39.130 0.00 0.00 0.00 3.68
520 861 6.913170 ACTACTTGCCACATCACTAATTTTG 58.087 36.000 0.00 0.00 0.00 2.44
521 862 7.524717 AACTACTTGCCACATCACTAATTTT 57.475 32.000 0.00 0.00 0.00 1.82
522 863 8.630054 TTAACTACTTGCCACATCACTAATTT 57.370 30.769 0.00 0.00 0.00 1.82
523 864 8.677300 CATTAACTACTTGCCACATCACTAATT 58.323 33.333 0.00 0.00 0.00 1.40
524 865 8.046708 TCATTAACTACTTGCCACATCACTAAT 58.953 33.333 0.00 0.00 0.00 1.73
525 866 7.390823 TCATTAACTACTTGCCACATCACTAA 58.609 34.615 0.00 0.00 0.00 2.24
526 867 6.941857 TCATTAACTACTTGCCACATCACTA 58.058 36.000 0.00 0.00 0.00 2.74
527 868 5.804639 TCATTAACTACTTGCCACATCACT 58.195 37.500 0.00 0.00 0.00 3.41
528 869 5.065218 CCTCATTAACTACTTGCCACATCAC 59.935 44.000 0.00 0.00 0.00 3.06
529 870 5.045942 TCCTCATTAACTACTTGCCACATCA 60.046 40.000 0.00 0.00 0.00 3.07
530 871 5.428253 TCCTCATTAACTACTTGCCACATC 58.572 41.667 0.00 0.00 0.00 3.06
531 872 5.435686 TCCTCATTAACTACTTGCCACAT 57.564 39.130 0.00 0.00 0.00 3.21
532 873 4.901197 TCCTCATTAACTACTTGCCACA 57.099 40.909 0.00 0.00 0.00 4.17
533 874 5.938125 TCTTTCCTCATTAACTACTTGCCAC 59.062 40.000 0.00 0.00 0.00 5.01
534 875 6.121776 TCTTTCCTCATTAACTACTTGCCA 57.878 37.500 0.00 0.00 0.00 4.92
535 876 5.586643 CCTCTTTCCTCATTAACTACTTGCC 59.413 44.000 0.00 0.00 0.00 4.52
536 877 5.065346 GCCTCTTTCCTCATTAACTACTTGC 59.935 44.000 0.00 0.00 0.00 4.01
537 878 6.173339 TGCCTCTTTCCTCATTAACTACTTG 58.827 40.000 0.00 0.00 0.00 3.16
538 879 6.374417 TGCCTCTTTCCTCATTAACTACTT 57.626 37.500 0.00 0.00 0.00 2.24
539 880 6.374417 TTGCCTCTTTCCTCATTAACTACT 57.626 37.500 0.00 0.00 0.00 2.57
540 881 7.631717 ATTTGCCTCTTTCCTCATTAACTAC 57.368 36.000 0.00 0.00 0.00 2.73
541 882 8.768397 TCTATTTGCCTCTTTCCTCATTAACTA 58.232 33.333 0.00 0.00 0.00 2.24
542 883 7.633789 TCTATTTGCCTCTTTCCTCATTAACT 58.366 34.615 0.00 0.00 0.00 2.24
543 884 7.554476 ACTCTATTTGCCTCTTTCCTCATTAAC 59.446 37.037 0.00 0.00 0.00 2.01
544 885 7.633789 ACTCTATTTGCCTCTTTCCTCATTAA 58.366 34.615 0.00 0.00 0.00 1.40
545 886 7.200434 ACTCTATTTGCCTCTTTCCTCATTA 57.800 36.000 0.00 0.00 0.00 1.90
546 887 6.072199 ACTCTATTTGCCTCTTTCCTCATT 57.928 37.500 0.00 0.00 0.00 2.57
547 888 5.707066 ACTCTATTTGCCTCTTTCCTCAT 57.293 39.130 0.00 0.00 0.00 2.90
548 889 6.013725 TGTTACTCTATTTGCCTCTTTCCTCA 60.014 38.462 0.00 0.00 0.00 3.86
549 890 6.407202 TGTTACTCTATTTGCCTCTTTCCTC 58.593 40.000 0.00 0.00 0.00 3.71
550 891 6.374417 TGTTACTCTATTTGCCTCTTTCCT 57.626 37.500 0.00 0.00 0.00 3.36
551 892 8.732746 TTATGTTACTCTATTTGCCTCTTTCC 57.267 34.615 0.00 0.00 0.00 3.13
580 921 3.311596 GGAAACCGCTATGTGATGGTAAC 59.688 47.826 0.00 0.00 33.45 2.50
581 922 3.055021 TGGAAACCGCTATGTGATGGTAA 60.055 43.478 0.00 0.00 33.45 2.85
582 923 2.502130 TGGAAACCGCTATGTGATGGTA 59.498 45.455 0.00 0.00 33.45 3.25
583 924 1.280710 TGGAAACCGCTATGTGATGGT 59.719 47.619 0.00 0.00 35.90 3.55
584 925 2.036958 TGGAAACCGCTATGTGATGG 57.963 50.000 0.00 0.00 0.00 3.51
585 926 3.793129 GCATTGGAAACCGCTATGTGATG 60.793 47.826 0.00 0.00 0.00 3.07
586 927 2.358898 GCATTGGAAACCGCTATGTGAT 59.641 45.455 0.00 0.00 0.00 3.06
587 928 1.742831 GCATTGGAAACCGCTATGTGA 59.257 47.619 0.00 0.00 0.00 3.58
588 929 1.472082 TGCATTGGAAACCGCTATGTG 59.528 47.619 0.00 0.00 0.00 3.21
589 930 1.832883 TGCATTGGAAACCGCTATGT 58.167 45.000 0.00 0.00 0.00 2.29
590 931 4.566545 TTATGCATTGGAAACCGCTATG 57.433 40.909 3.54 0.00 0.00 2.23
591 932 4.826733 TCATTATGCATTGGAAACCGCTAT 59.173 37.500 3.54 0.00 0.00 2.97
592 933 4.203226 TCATTATGCATTGGAAACCGCTA 58.797 39.130 3.54 0.00 0.00 4.26
593 934 3.023119 TCATTATGCATTGGAAACCGCT 58.977 40.909 3.54 0.00 0.00 5.52
594 935 3.181487 ACTCATTATGCATTGGAAACCGC 60.181 43.478 3.54 0.00 0.00 5.68
595 936 4.336433 AGACTCATTATGCATTGGAAACCG 59.664 41.667 3.54 0.00 0.00 4.44
596 937 5.841957 AGACTCATTATGCATTGGAAACC 57.158 39.130 3.54 0.00 0.00 3.27
597 938 7.320443 TGTAGACTCATTATGCATTGGAAAC 57.680 36.000 3.54 0.00 0.00 2.78
598 939 7.936496 TTGTAGACTCATTATGCATTGGAAA 57.064 32.000 3.54 0.00 0.00 3.13
599 940 7.611467 ACTTTGTAGACTCATTATGCATTGGAA 59.389 33.333 3.54 0.00 0.00 3.53
600 941 7.112122 ACTTTGTAGACTCATTATGCATTGGA 58.888 34.615 3.54 0.00 0.00 3.53
601 942 7.325660 ACTTTGTAGACTCATTATGCATTGG 57.674 36.000 3.54 0.00 0.00 3.16
612 953 9.162764 GCCTTCATTTATTACTTTGTAGACTCA 57.837 33.333 0.00 0.00 0.00 3.41
613 954 9.162764 TGCCTTCATTTATTACTTTGTAGACTC 57.837 33.333 0.00 0.00 0.00 3.36
614 955 9.515226 TTGCCTTCATTTATTACTTTGTAGACT 57.485 29.630 0.00 0.00 0.00 3.24
615 956 9.556030 GTTGCCTTCATTTATTACTTTGTAGAC 57.444 33.333 0.00 0.00 0.00 2.59
616 957 9.515226 AGTTGCCTTCATTTATTACTTTGTAGA 57.485 29.630 0.00 0.00 0.00 2.59
624 965 9.946165 GGTAACATAGTTGCCTTCATTTATTAC 57.054 33.333 9.36 0.00 0.00 1.89
625 966 9.688091 TGGTAACATAGTTGCCTTCATTTATTA 57.312 29.630 16.08 0.00 46.17 0.98
626 967 8.588290 TGGTAACATAGTTGCCTTCATTTATT 57.412 30.769 16.08 0.00 46.17 1.40
645 986 4.382362 GGGTAGTGTCATAGGTGTGGTAAC 60.382 50.000 0.00 0.00 0.00 2.50
646 987 3.770933 GGGTAGTGTCATAGGTGTGGTAA 59.229 47.826 0.00 0.00 0.00 2.85
647 988 3.245694 TGGGTAGTGTCATAGGTGTGGTA 60.246 47.826 0.00 0.00 0.00 3.25
648 989 2.185387 GGGTAGTGTCATAGGTGTGGT 58.815 52.381 0.00 0.00 0.00 4.16
649 990 2.093658 GTGGGTAGTGTCATAGGTGTGG 60.094 54.545 0.00 0.00 0.00 4.17
650 991 2.832129 AGTGGGTAGTGTCATAGGTGTG 59.168 50.000 0.00 0.00 0.00 3.82
651 992 2.832129 CAGTGGGTAGTGTCATAGGTGT 59.168 50.000 0.00 0.00 0.00 4.16
652 993 2.832129 ACAGTGGGTAGTGTCATAGGTG 59.168 50.000 0.00 0.00 35.58 4.00
653 994 2.832129 CACAGTGGGTAGTGTCATAGGT 59.168 50.000 0.00 0.00 38.40 3.08
654 995 3.096852 TCACAGTGGGTAGTGTCATAGG 58.903 50.000 0.00 0.00 38.40 2.57
655 996 4.382040 CCTTCACAGTGGGTAGTGTCATAG 60.382 50.000 0.00 0.00 38.40 2.23
656 997 3.513912 CCTTCACAGTGGGTAGTGTCATA 59.486 47.826 0.00 0.00 38.40 2.15
657 998 2.303022 CCTTCACAGTGGGTAGTGTCAT 59.697 50.000 0.00 0.00 38.40 3.06
658 999 1.691976 CCTTCACAGTGGGTAGTGTCA 59.308 52.381 0.00 0.00 38.40 3.58
659 1000 1.692519 ACCTTCACAGTGGGTAGTGTC 59.307 52.381 0.00 0.00 38.40 3.67
660 1001 1.802553 ACCTTCACAGTGGGTAGTGT 58.197 50.000 0.00 0.00 41.09 3.55
661 1002 3.594603 CTACCTTCACAGTGGGTAGTG 57.405 52.381 20.36 5.01 44.30 2.74
664 1005 8.505246 TCTATATTACTACCTTCACAGTGGGTA 58.495 37.037 0.00 4.71 34.86 3.69
665 1006 7.287235 GTCTATATTACTACCTTCACAGTGGGT 59.713 40.741 0.00 3.68 37.16 4.51
666 1007 7.506261 AGTCTATATTACTACCTTCACAGTGGG 59.494 40.741 0.00 0.00 0.00 4.61
667 1008 8.466617 AGTCTATATTACTACCTTCACAGTGG 57.533 38.462 0.00 0.00 0.00 4.00
705 1046 9.176460 GTGGAGAGTAACTTAGACTAGTAACAT 57.824 37.037 0.00 0.00 0.00 2.71
706 1047 8.381636 AGTGGAGAGTAACTTAGACTAGTAACA 58.618 37.037 0.00 0.00 0.00 2.41
707 1048 8.791327 AGTGGAGAGTAACTTAGACTAGTAAC 57.209 38.462 0.00 0.00 0.00 2.50
710 1051 8.770322 TCATAGTGGAGAGTAACTTAGACTAGT 58.230 37.037 0.00 0.00 0.00 2.57
711 1052 9.048446 GTCATAGTGGAGAGTAACTTAGACTAG 57.952 40.741 0.00 0.00 31.58 2.57
712 1053 7.992033 GGTCATAGTGGAGAGTAACTTAGACTA 59.008 40.741 0.00 0.00 33.27 2.59
713 1054 6.829811 GGTCATAGTGGAGAGTAACTTAGACT 59.170 42.308 0.00 0.00 33.27 3.24
714 1055 6.602406 TGGTCATAGTGGAGAGTAACTTAGAC 59.398 42.308 0.00 0.00 32.58 2.59
715 1056 6.728411 TGGTCATAGTGGAGAGTAACTTAGA 58.272 40.000 0.00 0.00 0.00 2.10
716 1057 6.460399 GCTGGTCATAGTGGAGAGTAACTTAG 60.460 46.154 0.00 0.00 0.00 2.18
717 1058 5.360144 GCTGGTCATAGTGGAGAGTAACTTA 59.640 44.000 0.00 0.00 0.00 2.24
718 1059 4.160626 GCTGGTCATAGTGGAGAGTAACTT 59.839 45.833 0.00 0.00 0.00 2.66
719 1060 3.702045 GCTGGTCATAGTGGAGAGTAACT 59.298 47.826 0.00 0.00 0.00 2.24
720 1061 3.181474 GGCTGGTCATAGTGGAGAGTAAC 60.181 52.174 0.00 0.00 0.00 2.50
721 1062 3.031736 GGCTGGTCATAGTGGAGAGTAA 58.968 50.000 0.00 0.00 0.00 2.24
722 1063 2.245028 AGGCTGGTCATAGTGGAGAGTA 59.755 50.000 0.00 0.00 0.00 2.59
723 1064 1.007721 AGGCTGGTCATAGTGGAGAGT 59.992 52.381 0.00 0.00 0.00 3.24
724 1065 1.686052 GAGGCTGGTCATAGTGGAGAG 59.314 57.143 0.00 0.00 0.00 3.20
725 1066 1.007118 TGAGGCTGGTCATAGTGGAGA 59.993 52.381 0.00 0.00 0.00 3.71
726 1067 1.489481 TGAGGCTGGTCATAGTGGAG 58.511 55.000 0.00 0.00 0.00 3.86
727 1068 1.555075 GTTGAGGCTGGTCATAGTGGA 59.445 52.381 0.00 0.00 0.00 4.02
728 1069 1.740380 CGTTGAGGCTGGTCATAGTGG 60.740 57.143 0.00 0.00 0.00 4.00
729 1070 1.204704 TCGTTGAGGCTGGTCATAGTG 59.795 52.381 0.00 0.00 0.00 2.74
730 1071 1.204941 GTCGTTGAGGCTGGTCATAGT 59.795 52.381 0.00 0.00 0.00 2.12
731 1072 1.204704 TGTCGTTGAGGCTGGTCATAG 59.795 52.381 0.00 0.00 0.00 2.23
732 1073 1.067142 GTGTCGTTGAGGCTGGTCATA 60.067 52.381 0.00 0.00 0.00 2.15
733 1074 0.320771 GTGTCGTTGAGGCTGGTCAT 60.321 55.000 0.00 0.00 0.00 3.06
734 1075 1.069090 GTGTCGTTGAGGCTGGTCA 59.931 57.895 0.00 0.00 0.00 4.02
735 1076 0.249911 AAGTGTCGTTGAGGCTGGTC 60.250 55.000 0.00 0.00 0.00 4.02
736 1077 0.249911 GAAGTGTCGTTGAGGCTGGT 60.250 55.000 0.00 0.00 0.00 4.00
737 1078 0.249868 TGAAGTGTCGTTGAGGCTGG 60.250 55.000 0.00 0.00 0.00 4.85
738 1079 0.861837 GTGAAGTGTCGTTGAGGCTG 59.138 55.000 0.00 0.00 0.00 4.85
739 1080 0.753262 AGTGAAGTGTCGTTGAGGCT 59.247 50.000 0.00 0.00 0.00 4.58
740 1081 0.861837 CAGTGAAGTGTCGTTGAGGC 59.138 55.000 0.00 0.00 0.00 4.70
741 1082 2.225068 ACAGTGAAGTGTCGTTGAGG 57.775 50.000 0.00 0.00 0.00 3.86
742 1083 3.489785 GGTTACAGTGAAGTGTCGTTGAG 59.510 47.826 0.00 0.00 31.46 3.02
813 1154 5.049680 GCGGTTGGTGATGGTGTTATATAAG 60.050 44.000 0.00 0.00 0.00 1.73
850 1196 6.375455 GGAGTAATAAATATGGCATGGAGGTG 59.625 42.308 10.98 0.00 0.00 4.00
868 1214 7.554118 CAGTGTTGTAGAATGGATTGGAGTAAT 59.446 37.037 0.00 0.00 0.00 1.89
878 1224 4.910195 AGATTGCAGTGTTGTAGAATGGA 58.090 39.130 0.00 0.00 0.00 3.41
886 1232 5.128919 AGAAGAAGAAGATTGCAGTGTTGT 58.871 37.500 0.00 0.00 0.00 3.32
970 1370 2.605097 CGTACGTATGTGTGTGTGGACA 60.605 50.000 7.22 0.00 0.00 4.02
1040 1440 0.246635 GCCGTCCAAGACTGAAGCTA 59.753 55.000 0.00 0.00 0.00 3.32
1122 1522 1.437986 GCCGTCGATGAAGTAGGCT 59.562 57.895 6.11 0.00 41.21 4.58
1283 1683 3.409026 AACGAGGCATCTTCTTCTTGT 57.591 42.857 0.00 0.00 0.00 3.16
1488 1897 8.954950 AATATTTGAGAGAGACGATCAACATT 57.045 30.769 0.00 0.00 32.91 2.71
1497 1906 9.127006 CATACTGATGAATATTTGAGAGAGACG 57.873 37.037 0.00 0.00 34.73 4.18
1529 1938 3.534056 GCCATCCTGCATGCCCAC 61.534 66.667 16.68 0.00 0.00 4.61
1708 2126 2.301346 CAGTTTGGTCTTTGGTCTGCT 58.699 47.619 0.00 0.00 0.00 4.24
1766 2184 8.303876 AGAACATGCGGATAAACAAATAAACTT 58.696 29.630 0.00 0.00 0.00 2.66
1767 2185 7.754924 CAGAACATGCGGATAAACAAATAAACT 59.245 33.333 0.00 0.00 0.00 2.66
1773 2191 3.832276 GCAGAACATGCGGATAAACAAA 58.168 40.909 0.00 0.00 46.99 2.83
1796 2214 0.578683 CGCACGCATGAGATTAGTGG 59.421 55.000 2.50 0.00 33.80 4.00
1824 2242 1.269726 GCACATGACAACAGGGGTTTG 60.270 52.381 0.00 0.00 34.21 2.93
1890 2308 5.183331 GGAGGGAGTAGAAATTTGTCAAACC 59.817 44.000 0.00 0.00 0.00 3.27
1920 2338 7.447430 GCTACTCTCTTCGTCTCGTAATATAC 58.553 42.308 0.00 0.00 0.00 1.47
1967 2386 9.065871 CCGTTGATGAATAGATGAAAGTTTTTC 57.934 33.333 0.00 0.00 0.00 2.29
1969 2388 8.110860 ACCGTTGATGAATAGATGAAAGTTTT 57.889 30.769 0.00 0.00 0.00 2.43
1979 2398 5.147330 ACAGTTGACCGTTGATGAATAGA 57.853 39.130 0.00 0.00 0.00 1.98
1980 2399 4.929211 TGACAGTTGACCGTTGATGAATAG 59.071 41.667 0.00 0.00 0.00 1.73
1982 2401 3.738982 TGACAGTTGACCGTTGATGAAT 58.261 40.909 0.00 0.00 0.00 2.57
1983 2402 3.186702 TGACAGTTGACCGTTGATGAA 57.813 42.857 0.00 0.00 0.00 2.57
1985 2404 2.348498 CGTTGACAGTTGACCGTTGATG 60.348 50.000 0.00 0.00 0.00 3.07
1986 2405 1.864711 CGTTGACAGTTGACCGTTGAT 59.135 47.619 0.00 0.00 0.00 2.57
1987 2406 1.282817 CGTTGACAGTTGACCGTTGA 58.717 50.000 0.00 0.00 0.00 3.18
1988 2407 1.003851 ACGTTGACAGTTGACCGTTG 58.996 50.000 0.00 0.00 0.00 4.10
1989 2408 2.159198 ACTACGTTGACAGTTGACCGTT 60.159 45.455 3.44 0.00 0.00 4.44
1990 2409 1.406539 ACTACGTTGACAGTTGACCGT 59.593 47.619 3.44 0.00 0.00 4.83
1991 2410 1.784856 CACTACGTTGACAGTTGACCG 59.215 52.381 3.44 0.00 0.00 4.79
1992 2411 3.088194 TCACTACGTTGACAGTTGACC 57.912 47.619 3.44 0.00 0.00 4.02
1993 2412 3.120991 GCATCACTACGTTGACAGTTGAC 60.121 47.826 3.44 0.00 0.00 3.18
1994 2413 3.057019 GCATCACTACGTTGACAGTTGA 58.943 45.455 3.44 0.00 0.00 3.18
1995 2414 2.799978 TGCATCACTACGTTGACAGTTG 59.200 45.455 3.44 0.00 0.00 3.16
1996 2415 3.059884 CTGCATCACTACGTTGACAGTT 58.940 45.455 3.44 0.00 0.00 3.16
1997 2416 2.296190 TCTGCATCACTACGTTGACAGT 59.704 45.455 3.44 0.00 0.00 3.55
1998 2417 2.919859 CTCTGCATCACTACGTTGACAG 59.080 50.000 3.44 3.07 0.00 3.51
1999 2418 2.352715 CCTCTGCATCACTACGTTGACA 60.353 50.000 3.44 0.00 0.00 3.58
2000 2419 2.263077 CCTCTGCATCACTACGTTGAC 58.737 52.381 3.44 0.00 0.00 3.18
2001 2420 1.404181 GCCTCTGCATCACTACGTTGA 60.404 52.381 3.44 0.00 37.47 3.18
2002 2421 1.002366 GCCTCTGCATCACTACGTTG 58.998 55.000 0.00 0.00 37.47 4.10
2003 2422 0.898320 AGCCTCTGCATCACTACGTT 59.102 50.000 0.00 0.00 41.13 3.99
2004 2423 0.174389 CAGCCTCTGCATCACTACGT 59.826 55.000 0.00 0.00 41.13 3.57
2005 2424 0.529337 CCAGCCTCTGCATCACTACG 60.529 60.000 0.00 0.00 41.13 3.51
2006 2425 0.179062 CCCAGCCTCTGCATCACTAC 60.179 60.000 0.00 0.00 41.13 2.73
2007 2426 1.340399 CCCCAGCCTCTGCATCACTA 61.340 60.000 0.00 0.00 41.13 2.74
2008 2427 2.677289 CCCCAGCCTCTGCATCACT 61.677 63.158 0.00 0.00 41.13 3.41
2009 2428 1.626356 TACCCCAGCCTCTGCATCAC 61.626 60.000 0.00 0.00 41.13 3.06
2010 2429 0.913934 TTACCCCAGCCTCTGCATCA 60.914 55.000 0.00 0.00 41.13 3.07
2011 2430 0.255890 TTTACCCCAGCCTCTGCATC 59.744 55.000 0.00 0.00 41.13 3.91
2012 2431 0.704076 TTTTACCCCAGCCTCTGCAT 59.296 50.000 0.00 0.00 41.13 3.96
2013 2432 0.251165 GTTTTACCCCAGCCTCTGCA 60.251 55.000 0.00 0.00 41.13 4.41
2014 2433 0.965866 GGTTTTACCCCAGCCTCTGC 60.966 60.000 0.00 0.00 32.07 4.26
2015 2434 3.266240 GGTTTTACCCCAGCCTCTG 57.734 57.895 0.00 0.00 30.04 3.35
2048 2467 9.281075 GATTTTTGTACTACGTTGACAGTTTTT 57.719 29.630 3.44 0.00 0.00 1.94
2049 2468 8.452534 TGATTTTTGTACTACGTTGACAGTTTT 58.547 29.630 3.44 0.00 0.00 2.43
2050 2469 7.976826 TGATTTTTGTACTACGTTGACAGTTT 58.023 30.769 3.44 0.00 0.00 2.66
2074 2494 8.624776 GGACCTGGATCAATTTTTACTTCTATG 58.375 37.037 0.00 0.00 0.00 2.23
2113 2534 1.344438 TCCAGTGCTTGAAGTCATCGT 59.656 47.619 0.00 0.00 0.00 3.73
2178 2600 3.695060 TGTTACAACAATGTTTGTCCGGT 59.305 39.130 0.00 0.00 44.59 5.28
2199 2621 1.787155 CAACGACTTTCCGACTGTCTG 59.213 52.381 6.21 0.00 0.00 3.51
2210 2632 1.235724 GGCCTTAGCACAACGACTTT 58.764 50.000 0.00 0.00 42.56 2.66
2267 2695 7.341769 CCTTCCGATCTATCCTTCTCTTCATAT 59.658 40.741 0.00 0.00 0.00 1.78
2268 2696 6.661377 CCTTCCGATCTATCCTTCTCTTCATA 59.339 42.308 0.00 0.00 0.00 2.15
2345 2774 0.030235 GGCGTTTGTCTTTGGTGGAC 59.970 55.000 0.00 0.00 0.00 4.02
2507 2940 2.875933 CTGAGTTTGTTAGGGTTTGCGA 59.124 45.455 0.00 0.00 0.00 5.10
2509 2942 4.911514 TTCTGAGTTTGTTAGGGTTTGC 57.088 40.909 0.00 0.00 0.00 3.68
2596 3032 0.750546 CCACCTCATCTGCCATGGTG 60.751 60.000 14.67 7.08 45.42 4.17
2604 3044 1.219124 CACCGGTCCACCTCATCTG 59.781 63.158 2.59 0.00 0.00 2.90
2623 3066 2.125753 GCCTCTCACCTGCGTCAG 60.126 66.667 0.52 0.52 0.00 3.51
2624 3067 2.917227 TGCCTCTCACCTGCGTCA 60.917 61.111 0.00 0.00 0.00 4.35
2626 3069 3.699894 CCTGCCTCTCACCTGCGT 61.700 66.667 0.00 0.00 0.00 5.24
2629 3072 0.179936 GATTCCCTGCCTCTCACCTG 59.820 60.000 0.00 0.00 0.00 4.00
2630 3073 0.985490 GGATTCCCTGCCTCTCACCT 60.985 60.000 0.00 0.00 0.00 4.00
2631 3074 1.529309 GGATTCCCTGCCTCTCACC 59.471 63.158 0.00 0.00 0.00 4.02
2632 3075 1.529309 GGGATTCCCTGCCTCTCAC 59.471 63.158 14.98 0.00 41.34 3.51
2633 3076 4.073201 GGGATTCCCTGCCTCTCA 57.927 61.111 14.98 0.00 41.34 3.27
2642 3085 1.623163 CCTCTCGTCTAGGGATTCCC 58.377 60.000 14.42 14.42 45.90 3.97
2643 3086 0.963225 GCCTCTCGTCTAGGGATTCC 59.037 60.000 0.00 0.00 34.46 3.01
2644 3087 1.611491 CTGCCTCTCGTCTAGGGATTC 59.389 57.143 0.00 0.00 33.56 2.52
2645 3088 1.698506 CTGCCTCTCGTCTAGGGATT 58.301 55.000 0.00 0.00 33.56 3.01
2646 3089 0.178975 CCTGCCTCTCGTCTAGGGAT 60.179 60.000 0.00 0.00 33.56 3.85
2647 3090 1.227664 CCTGCCTCTCGTCTAGGGA 59.772 63.158 0.00 0.00 34.46 4.20
2648 3091 1.830408 CCCTGCCTCTCGTCTAGGG 60.830 68.421 0.00 0.00 41.90 3.53
2649 3092 0.395862 TTCCCTGCCTCTCGTCTAGG 60.396 60.000 0.00 0.00 37.17 3.02
2650 3093 1.135333 GTTTCCCTGCCTCTCGTCTAG 59.865 57.143 0.00 0.00 0.00 2.43
2651 3094 1.183549 GTTTCCCTGCCTCTCGTCTA 58.816 55.000 0.00 0.00 0.00 2.59
2652 3095 1.545706 GGTTTCCCTGCCTCTCGTCT 61.546 60.000 0.00 0.00 0.00 4.18
2653 3096 1.079057 GGTTTCCCTGCCTCTCGTC 60.079 63.158 0.00 0.00 0.00 4.20
2654 3097 2.593956 GGGTTTCCCTGCCTCTCGT 61.594 63.158 0.00 0.00 41.34 4.18


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.