Multiple sequence alignment - TraesCS2B01G281800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G281800 chr2B 100.000 4030 0 0 1 4030 390119121 390115092 0.000000e+00 7443.0
1 TraesCS2B01G281800 chr2B 91.649 970 60 10 537 1496 390144728 390143770 0.000000e+00 1323.0
2 TraesCS2B01G281800 chr2B 92.241 464 32 4 2 465 787285789 787286248 0.000000e+00 654.0
3 TraesCS2B01G281800 chr2B 92.241 464 32 4 2 465 787319066 787319525 0.000000e+00 654.0
4 TraesCS2B01G281800 chr2B 95.556 45 2 0 1527 1571 390143757 390143713 5.590000e-09 73.1
5 TraesCS2B01G281800 chr2B 97.297 37 1 0 3036 3072 390143712 390143676 3.360000e-06 63.9
6 TraesCS2B01G281800 chr2A 95.312 3392 104 17 682 4030 409639389 409642768 0.000000e+00 5332.0
7 TraesCS2B01G281800 chr2A 91.803 61 4 1 624 684 409637217 409637276 2.580000e-12 84.2
8 TraesCS2B01G281800 chr2D 95.007 2944 93 24 511 3420 321915208 321912285 0.000000e+00 4573.0
9 TraesCS2B01G281800 chr2D 94.991 559 24 2 3475 4030 321912284 321911727 0.000000e+00 874.0
10 TraesCS2B01G281800 chr2D 92.719 467 24 6 2 467 374155916 374155459 0.000000e+00 665.0
11 TraesCS2B01G281800 chr3B 93.860 456 25 3 6 461 772911409 772911861 0.000000e+00 684.0
12 TraesCS2B01G281800 chr4A 92.826 460 29 4 3 461 613575185 613574729 0.000000e+00 664.0
13 TraesCS2B01G281800 chr6A 92.241 464 32 4 2 465 521993915 521993456 0.000000e+00 654.0
14 TraesCS2B01G281800 chr4B 91.915 470 34 4 2 471 201689674 201689209 0.000000e+00 654.0
15 TraesCS2B01G281800 chr1D 92.094 468 31 4 2 465 34662565 34662100 0.000000e+00 654.0
16 TraesCS2B01G281800 chr1D 92.258 465 30 6 2 465 415227673 415227214 0.000000e+00 654.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G281800 chr2B 390115092 390119121 4029 True 7443.000000 7443 100.0000 1 4030 1 chr2B.!!$R1 4029
1 TraesCS2B01G281800 chr2B 390143676 390144728 1052 True 486.666667 1323 94.8340 537 3072 3 chr2B.!!$R2 2535
2 TraesCS2B01G281800 chr2A 409637217 409642768 5551 False 2708.100000 5332 93.5575 624 4030 2 chr2A.!!$F1 3406
3 TraesCS2B01G281800 chr2D 321911727 321915208 3481 True 2723.500000 4573 94.9990 511 4030 2 chr2D.!!$R2 3519

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
270 271 0.034896 ACGGCGTCATTTGAGGAGTT 59.965 50.0 6.77 0.0 32.08 3.01 F
618 620 0.035152 AGATCCGGCTGAACATTGCA 60.035 50.0 0.00 0.0 0.00 4.08 F
619 621 0.810648 GATCCGGCTGAACATTGCAA 59.189 50.0 0.00 0.0 0.00 4.08 F
708 2827 0.820871 ACCTGCGTTTTCCTTTTGCA 59.179 45.0 0.00 0.0 0.00 4.08 F
1765 3909 0.898320 GAGTGGAAGTAGCAGGAGCA 59.102 55.0 0.00 0.0 45.49 4.26 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1748 3892 0.107945 CCTGCTCCTGCTACTTCCAC 60.108 60.000 0.0 0.0 40.48 4.02 R
1751 3895 0.179086 GCTCCTGCTCCTGCTACTTC 60.179 60.000 0.0 0.0 40.48 3.01 R
1752 3896 0.906756 TGCTCCTGCTCCTGCTACTT 60.907 55.000 0.0 0.0 40.48 2.24 R
2384 4528 1.285373 TCTCTTCTAGTCCGCTTCCCT 59.715 52.381 0.0 0.0 0.00 4.20 R
3445 5604 0.590195 GCTCCTTGCAATATCCTGCG 59.410 55.000 0.0 0.0 45.74 5.18 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
18 19 3.458579 CGTCGCCGAGTGTTCGTG 61.459 66.667 0.00 0.00 45.28 4.35
19 20 3.103911 GTCGCCGAGTGTTCGTGG 61.104 66.667 0.00 0.00 45.28 4.94
22 23 2.665185 GCCGAGTGTTCGTGGCTT 60.665 61.111 0.00 0.00 45.28 4.35
23 24 2.668280 GCCGAGTGTTCGTGGCTTC 61.668 63.158 0.00 0.00 45.28 3.86
24 25 2.372690 CCGAGTGTTCGTGGCTTCG 61.373 63.158 0.00 0.00 45.28 3.79
25 26 2.853914 GAGTGTTCGTGGCTTCGC 59.146 61.111 0.00 0.00 0.00 4.70
36 37 3.052082 GCTTCGCCAGCTGCTTCA 61.052 61.111 8.66 0.00 46.27 3.02
37 38 3.036783 GCTTCGCCAGCTGCTTCAG 62.037 63.158 8.66 2.47 46.27 3.02
38 39 2.359107 TTCGCCAGCTGCTTCAGG 60.359 61.111 8.66 0.00 38.05 3.86
39 40 2.793160 CTTCGCCAGCTGCTTCAGGA 62.793 60.000 8.66 0.00 38.05 3.86
40 41 2.793160 TTCGCCAGCTGCTTCAGGAG 62.793 60.000 8.66 5.42 38.05 3.69
52 53 3.979101 CTTCAGGAGCTCTCTTTCCTT 57.021 47.619 14.64 0.00 41.86 3.36
53 54 3.598299 CTTCAGGAGCTCTCTTTCCTTG 58.402 50.000 14.64 0.00 41.86 3.61
54 55 2.614259 TCAGGAGCTCTCTTTCCTTGT 58.386 47.619 14.64 0.00 41.86 3.16
55 56 2.975489 TCAGGAGCTCTCTTTCCTTGTT 59.025 45.455 14.64 0.00 41.86 2.83
56 57 3.072944 CAGGAGCTCTCTTTCCTTGTTG 58.927 50.000 14.64 0.00 41.86 3.33
57 58 2.975489 AGGAGCTCTCTTTCCTTGTTGA 59.025 45.455 14.64 0.00 40.96 3.18
58 59 3.586618 AGGAGCTCTCTTTCCTTGTTGAT 59.413 43.478 14.64 0.00 40.96 2.57
59 60 3.938334 GGAGCTCTCTTTCCTTGTTGATC 59.062 47.826 14.64 0.00 0.00 2.92
60 61 3.594134 AGCTCTCTTTCCTTGTTGATCG 58.406 45.455 0.00 0.00 0.00 3.69
61 62 3.007398 AGCTCTCTTTCCTTGTTGATCGT 59.993 43.478 0.00 0.00 0.00 3.73
62 63 3.124297 GCTCTCTTTCCTTGTTGATCGTG 59.876 47.826 0.00 0.00 0.00 4.35
63 64 3.067106 TCTCTTTCCTTGTTGATCGTGC 58.933 45.455 0.00 0.00 0.00 5.34
64 65 2.151202 TCTTTCCTTGTTGATCGTGCC 58.849 47.619 0.00 0.00 0.00 5.01
65 66 1.879380 CTTTCCTTGTTGATCGTGCCA 59.121 47.619 0.00 0.00 0.00 4.92
66 67 1.234821 TTCCTTGTTGATCGTGCCAC 58.765 50.000 0.00 0.00 0.00 5.01
67 68 0.948623 TCCTTGTTGATCGTGCCACG 60.949 55.000 11.80 11.80 44.19 4.94
75 76 4.005902 TCGTGCCACGATGGTCTA 57.994 55.556 17.22 0.00 46.73 2.59
76 77 1.509463 TCGTGCCACGATGGTCTAC 59.491 57.895 17.22 0.00 46.73 2.59
77 78 0.963856 TCGTGCCACGATGGTCTACT 60.964 55.000 17.22 0.00 46.73 2.57
78 79 0.802222 CGTGCCACGATGGTCTACTG 60.802 60.000 12.85 0.00 46.05 2.74
79 80 1.084370 GTGCCACGATGGTCTACTGC 61.084 60.000 0.00 0.00 40.46 4.40
80 81 1.878522 GCCACGATGGTCTACTGCG 60.879 63.158 0.00 0.00 40.46 5.18
81 82 1.807226 CCACGATGGTCTACTGCGA 59.193 57.895 0.00 0.00 31.35 5.10
82 83 0.525668 CCACGATGGTCTACTGCGAC 60.526 60.000 0.00 0.00 31.35 5.19
83 84 0.170339 CACGATGGTCTACTGCGACA 59.830 55.000 0.00 0.00 35.63 4.35
84 85 0.885879 ACGATGGTCTACTGCGACAA 59.114 50.000 0.00 0.00 35.63 3.18
85 86 1.135373 ACGATGGTCTACTGCGACAAG 60.135 52.381 0.00 0.00 35.63 3.16
86 87 1.799181 CGATGGTCTACTGCGACAAGG 60.799 57.143 0.00 0.00 35.63 3.61
87 88 1.204941 GATGGTCTACTGCGACAAGGT 59.795 52.381 0.00 0.00 35.63 3.50
88 89 0.601558 TGGTCTACTGCGACAAGGTC 59.398 55.000 0.00 0.00 35.63 3.85
89 90 0.889306 GGTCTACTGCGACAAGGTCT 59.111 55.000 0.00 0.00 35.63 3.85
90 91 1.135344 GGTCTACTGCGACAAGGTCTC 60.135 57.143 0.00 0.00 35.63 3.36
91 92 0.803117 TCTACTGCGACAAGGTCTCG 59.197 55.000 0.00 0.00 0.00 4.04
92 93 0.179161 CTACTGCGACAAGGTCTCGG 60.179 60.000 0.00 0.00 30.91 4.63
93 94 2.209064 TACTGCGACAAGGTCTCGGC 62.209 60.000 0.00 0.00 27.86 5.54
94 95 4.717629 TGCGACAAGGTCTCGGCG 62.718 66.667 0.00 0.00 0.00 6.46
96 97 4.052229 CGACAAGGTCTCGGCGGT 62.052 66.667 7.21 0.00 0.00 5.68
97 98 2.126031 GACAAGGTCTCGGCGGTC 60.126 66.667 7.21 0.04 0.00 4.79
98 99 2.600769 ACAAGGTCTCGGCGGTCT 60.601 61.111 7.21 0.00 0.00 3.85
99 100 1.303888 ACAAGGTCTCGGCGGTCTA 60.304 57.895 7.21 0.00 0.00 2.59
100 101 1.139095 CAAGGTCTCGGCGGTCTAC 59.861 63.158 7.21 0.00 0.00 2.59
101 102 2.050934 AAGGTCTCGGCGGTCTACC 61.051 63.158 7.21 9.79 0.00 3.18
102 103 2.439883 GGTCTCGGCGGTCTACCT 60.440 66.667 7.21 0.00 0.00 3.08
103 104 2.479750 GGTCTCGGCGGTCTACCTC 61.480 68.421 7.21 0.00 0.00 3.85
104 105 1.451747 GTCTCGGCGGTCTACCTCT 60.452 63.158 7.21 0.00 0.00 3.69
105 106 1.031029 GTCTCGGCGGTCTACCTCTT 61.031 60.000 7.21 0.00 0.00 2.85
106 107 0.747283 TCTCGGCGGTCTACCTCTTC 60.747 60.000 7.21 0.00 0.00 2.87
107 108 2.049475 CTCGGCGGTCTACCTCTTCG 62.049 65.000 7.21 0.00 0.00 3.79
108 109 2.104530 GGCGGTCTACCTCTTCGC 59.895 66.667 0.00 0.00 44.80 4.70
109 110 2.416432 GGCGGTCTACCTCTTCGCT 61.416 63.158 0.00 0.00 44.88 4.93
110 111 1.099879 GGCGGTCTACCTCTTCGCTA 61.100 60.000 0.00 0.00 44.88 4.26
111 112 0.737219 GCGGTCTACCTCTTCGCTAA 59.263 55.000 0.00 0.00 42.62 3.09
112 113 1.533547 GCGGTCTACCTCTTCGCTAAC 60.534 57.143 0.00 0.00 42.62 2.34
113 114 1.065251 CGGTCTACCTCTTCGCTAACC 59.935 57.143 0.00 0.00 0.00 2.85
114 115 1.408340 GGTCTACCTCTTCGCTAACCC 59.592 57.143 0.00 0.00 0.00 4.11
115 116 1.065251 GTCTACCTCTTCGCTAACCCG 59.935 57.143 0.00 0.00 0.00 5.28
116 117 0.384669 CTACCTCTTCGCTAACCCGG 59.615 60.000 0.00 0.00 0.00 5.73
117 118 0.323725 TACCTCTTCGCTAACCCGGT 60.324 55.000 0.00 0.00 0.00 5.28
118 119 1.153628 CCTCTTCGCTAACCCGGTG 60.154 63.158 0.00 0.00 0.00 4.94
119 120 1.810030 CTCTTCGCTAACCCGGTGC 60.810 63.158 0.00 0.00 0.00 5.01
120 121 2.047655 CTTCGCTAACCCGGTGCA 60.048 61.111 0.00 0.00 0.00 4.57
121 122 1.449601 CTTCGCTAACCCGGTGCAT 60.450 57.895 0.00 0.00 0.00 3.96
122 123 1.429148 CTTCGCTAACCCGGTGCATC 61.429 60.000 0.00 0.00 0.00 3.91
123 124 2.125310 CGCTAACCCGGTGCATCA 60.125 61.111 0.00 0.00 0.00 3.07
124 125 1.523711 CGCTAACCCGGTGCATCAT 60.524 57.895 0.00 0.00 0.00 2.45
125 126 1.498865 CGCTAACCCGGTGCATCATC 61.499 60.000 0.00 0.00 0.00 2.92
126 127 1.498865 GCTAACCCGGTGCATCATCG 61.499 60.000 0.00 0.00 37.76 3.84
127 128 0.104120 CTAACCCGGTGCATCATCGA 59.896 55.000 0.00 0.00 40.81 3.59
128 129 0.179094 TAACCCGGTGCATCATCGAC 60.179 55.000 0.00 0.00 40.81 4.20
129 130 2.961721 CCCGGTGCATCATCGACG 60.962 66.667 0.00 0.00 40.81 5.12
130 131 2.961721 CCGGTGCATCATCGACGG 60.962 66.667 0.00 0.00 40.81 4.79
131 132 2.104132 CGGTGCATCATCGACGGA 59.896 61.111 0.00 0.00 40.81 4.69
132 133 2.230940 CGGTGCATCATCGACGGAC 61.231 63.158 0.00 0.00 40.81 4.79
133 134 1.883084 GGTGCATCATCGACGGACC 60.883 63.158 0.00 0.00 0.00 4.46
134 135 1.153647 GTGCATCATCGACGGACCA 60.154 57.895 0.00 0.00 0.00 4.02
135 136 0.739462 GTGCATCATCGACGGACCAA 60.739 55.000 0.00 0.00 0.00 3.67
136 137 0.460109 TGCATCATCGACGGACCAAG 60.460 55.000 0.00 0.00 0.00 3.61
137 138 1.766143 GCATCATCGACGGACCAAGC 61.766 60.000 0.00 0.00 0.00 4.01
138 139 0.460109 CATCATCGACGGACCAAGCA 60.460 55.000 0.00 0.00 0.00 3.91
139 140 0.465705 ATCATCGACGGACCAAGCAT 59.534 50.000 0.00 0.00 0.00 3.79
140 141 1.107945 TCATCGACGGACCAAGCATA 58.892 50.000 0.00 0.00 0.00 3.14
141 142 1.686587 TCATCGACGGACCAAGCATAT 59.313 47.619 0.00 0.00 0.00 1.78
142 143 2.102420 TCATCGACGGACCAAGCATATT 59.898 45.455 0.00 0.00 0.00 1.28
143 144 1.934589 TCGACGGACCAAGCATATTG 58.065 50.000 0.00 0.00 0.00 1.90
144 145 1.478916 TCGACGGACCAAGCATATTGA 59.521 47.619 0.00 0.00 0.00 2.57
145 146 1.860950 CGACGGACCAAGCATATTGAG 59.139 52.381 0.00 0.00 0.00 3.02
146 147 2.738643 CGACGGACCAAGCATATTGAGT 60.739 50.000 0.00 0.00 0.00 3.41
147 148 3.270877 GACGGACCAAGCATATTGAGTT 58.729 45.455 0.00 0.00 0.00 3.01
148 149 3.009723 ACGGACCAAGCATATTGAGTTG 58.990 45.455 0.00 0.00 0.00 3.16
149 150 2.355756 CGGACCAAGCATATTGAGTTGG 59.644 50.000 0.00 0.00 44.34 3.77
150 151 3.620488 GGACCAAGCATATTGAGTTGGA 58.380 45.455 6.95 0.00 41.82 3.53
151 152 4.210331 GGACCAAGCATATTGAGTTGGAT 58.790 43.478 6.95 0.00 41.82 3.41
152 153 5.376625 GGACCAAGCATATTGAGTTGGATA 58.623 41.667 6.95 0.00 41.82 2.59
153 154 6.006449 GGACCAAGCATATTGAGTTGGATAT 58.994 40.000 6.95 0.00 41.82 1.63
154 155 6.150140 GGACCAAGCATATTGAGTTGGATATC 59.850 42.308 6.95 0.00 41.82 1.63
155 156 6.006449 ACCAAGCATATTGAGTTGGATATCC 58.994 40.000 15.39 15.39 41.82 2.59
156 157 6.005823 CCAAGCATATTGAGTTGGATATCCA 58.994 40.000 20.98 20.98 45.94 3.41
157 158 6.662234 CCAAGCATATTGAGTTGGATATCCAT 59.338 38.462 25.07 11.55 46.97 3.41
158 159 7.177921 CCAAGCATATTGAGTTGGATATCCATT 59.822 37.037 25.07 16.13 46.97 3.16
159 160 8.582437 CAAGCATATTGAGTTGGATATCCATTT 58.418 33.333 25.07 15.77 46.97 2.32
160 161 8.716674 AGCATATTGAGTTGGATATCCATTTT 57.283 30.769 25.07 13.29 46.97 1.82
161 162 8.582437 AGCATATTGAGTTGGATATCCATTTTG 58.418 33.333 25.07 14.05 46.97 2.44
162 163 8.362639 GCATATTGAGTTGGATATCCATTTTGT 58.637 33.333 25.07 12.12 46.97 2.83
165 166 6.435430 TGAGTTGGATATCCATTTTGTTCG 57.565 37.500 25.07 0.00 46.97 3.95
166 167 5.356751 TGAGTTGGATATCCATTTTGTTCGG 59.643 40.000 25.07 0.00 46.97 4.30
167 168 4.644685 AGTTGGATATCCATTTTGTTCGGG 59.355 41.667 25.07 0.00 46.97 5.14
168 169 4.511786 TGGATATCCATTTTGTTCGGGA 57.488 40.909 20.98 0.00 42.01 5.14
169 170 4.861196 TGGATATCCATTTTGTTCGGGAA 58.139 39.130 20.98 0.00 42.01 3.97
170 171 4.642885 TGGATATCCATTTTGTTCGGGAAC 59.357 41.667 20.98 4.63 42.01 3.62
171 172 4.642885 GGATATCCATTTTGTTCGGGAACA 59.357 41.667 17.34 10.04 41.61 3.18
172 173 5.221048 GGATATCCATTTTGTTCGGGAACAG 60.221 44.000 17.34 3.46 42.89 3.16
173 174 8.123601 GGATATCCATTTTGTTCGGGAACAGG 62.124 46.154 17.34 11.47 42.89 4.00
177 178 2.112297 TGTTCGGGAACAGGTGGC 59.888 61.111 10.04 0.00 45.42 5.01
178 179 2.671963 GTTCGGGAACAGGTGGCC 60.672 66.667 6.68 0.00 40.84 5.36
179 180 3.961414 TTCGGGAACAGGTGGCCC 61.961 66.667 0.00 0.00 38.53 5.80
180 181 4.974438 TCGGGAACAGGTGGCCCT 62.974 66.667 0.00 0.00 44.02 5.19
181 182 3.966543 CGGGAACAGGTGGCCCTT 61.967 66.667 0.00 0.00 39.89 3.95
182 183 2.283173 GGGAACAGGTGGCCCTTG 60.283 66.667 0.00 0.38 39.89 3.61
183 184 2.283173 GGAACAGGTGGCCCTTGG 60.283 66.667 0.00 0.00 39.89 3.61
193 194 4.579127 GCCCTTGGCCATATTCGT 57.421 55.556 6.09 0.00 44.06 3.85
194 195 2.032981 GCCCTTGGCCATATTCGTG 58.967 57.895 6.09 0.00 44.06 4.35
195 196 0.751643 GCCCTTGGCCATATTCGTGT 60.752 55.000 6.09 0.00 44.06 4.49
196 197 1.762708 CCCTTGGCCATATTCGTGTT 58.237 50.000 6.09 0.00 0.00 3.32
197 198 2.099405 CCCTTGGCCATATTCGTGTTT 58.901 47.619 6.09 0.00 0.00 2.83
198 199 2.495669 CCCTTGGCCATATTCGTGTTTT 59.504 45.455 6.09 0.00 0.00 2.43
199 200 3.697045 CCCTTGGCCATATTCGTGTTTTA 59.303 43.478 6.09 0.00 0.00 1.52
200 201 4.439563 CCCTTGGCCATATTCGTGTTTTAC 60.440 45.833 6.09 0.00 0.00 2.01
201 202 4.156922 CCTTGGCCATATTCGTGTTTTACA 59.843 41.667 6.09 0.00 0.00 2.41
202 203 4.688511 TGGCCATATTCGTGTTTTACAC 57.311 40.909 0.00 0.00 45.26 2.90
213 214 4.979564 GTGTTTTACACGTCCCTACTTC 57.020 45.455 0.00 0.00 39.53 3.01
214 215 3.742882 GTGTTTTACACGTCCCTACTTCC 59.257 47.826 0.00 0.00 39.53 3.46
215 216 3.244181 TGTTTTACACGTCCCTACTTCCC 60.244 47.826 0.00 0.00 0.00 3.97
216 217 2.307496 TTACACGTCCCTACTTCCCA 57.693 50.000 0.00 0.00 0.00 4.37
217 218 2.307496 TACACGTCCCTACTTCCCAA 57.693 50.000 0.00 0.00 0.00 4.12
218 219 0.683412 ACACGTCCCTACTTCCCAAC 59.317 55.000 0.00 0.00 0.00 3.77
219 220 0.682852 CACGTCCCTACTTCCCAACA 59.317 55.000 0.00 0.00 0.00 3.33
220 221 1.071071 CACGTCCCTACTTCCCAACAA 59.929 52.381 0.00 0.00 0.00 2.83
221 222 1.982958 ACGTCCCTACTTCCCAACAAT 59.017 47.619 0.00 0.00 0.00 2.71
222 223 2.374170 ACGTCCCTACTTCCCAACAATT 59.626 45.455 0.00 0.00 0.00 2.32
223 224 3.181437 ACGTCCCTACTTCCCAACAATTT 60.181 43.478 0.00 0.00 0.00 1.82
224 225 3.190535 CGTCCCTACTTCCCAACAATTTG 59.809 47.826 0.00 0.00 0.00 2.32
225 226 3.056821 GTCCCTACTTCCCAACAATTTGC 60.057 47.826 0.00 0.00 0.00 3.68
226 227 2.233676 CCCTACTTCCCAACAATTTGCC 59.766 50.000 0.00 0.00 0.00 4.52
227 228 2.094752 CCTACTTCCCAACAATTTGCCG 60.095 50.000 0.00 0.00 0.00 5.69
228 229 1.698506 ACTTCCCAACAATTTGCCGA 58.301 45.000 0.00 0.00 0.00 5.54
229 230 2.247358 ACTTCCCAACAATTTGCCGAT 58.753 42.857 0.00 0.00 0.00 4.18
230 231 3.426615 ACTTCCCAACAATTTGCCGATA 58.573 40.909 0.00 0.00 0.00 2.92
231 232 4.023291 ACTTCCCAACAATTTGCCGATAT 58.977 39.130 0.00 0.00 0.00 1.63
232 233 4.097892 ACTTCCCAACAATTTGCCGATATC 59.902 41.667 0.00 0.00 0.00 1.63
233 234 3.625853 TCCCAACAATTTGCCGATATCA 58.374 40.909 3.12 0.00 0.00 2.15
234 235 4.214310 TCCCAACAATTTGCCGATATCAT 58.786 39.130 3.12 0.00 0.00 2.45
235 236 4.037803 TCCCAACAATTTGCCGATATCATG 59.962 41.667 3.12 0.00 0.00 3.07
236 237 4.037803 CCCAACAATTTGCCGATATCATGA 59.962 41.667 0.00 0.00 0.00 3.07
237 238 5.279106 CCCAACAATTTGCCGATATCATGAT 60.279 40.000 13.81 13.81 0.00 2.45
238 239 5.860182 CCAACAATTTGCCGATATCATGATC 59.140 40.000 12.53 0.00 0.00 2.92
239 240 6.440436 CAACAATTTGCCGATATCATGATCA 58.560 36.000 12.53 0.00 0.00 2.92
240 241 6.638096 ACAATTTGCCGATATCATGATCAA 57.362 33.333 12.53 7.07 0.00 2.57
241 242 6.675026 ACAATTTGCCGATATCATGATCAAG 58.325 36.000 12.53 4.44 0.00 3.02
242 243 5.892160 ATTTGCCGATATCATGATCAAGG 57.108 39.130 12.53 14.19 0.00 3.61
243 244 3.339253 TGCCGATATCATGATCAAGGG 57.661 47.619 12.53 10.61 0.00 3.95
244 245 2.012673 GCCGATATCATGATCAAGGGC 58.987 52.381 12.53 16.31 0.00 5.19
245 246 2.355513 GCCGATATCATGATCAAGGGCT 60.356 50.000 22.69 0.72 35.25 5.19
246 247 3.871463 GCCGATATCATGATCAAGGGCTT 60.871 47.826 22.69 0.10 35.25 4.35
247 248 3.688185 CCGATATCATGATCAAGGGCTTG 59.312 47.826 12.53 0.00 41.71 4.01
248 249 3.126514 CGATATCATGATCAAGGGCTTGC 59.873 47.826 12.53 0.00 40.24 4.01
249 250 2.750141 ATCATGATCAAGGGCTTGCT 57.250 45.000 1.18 0.00 40.24 3.91
250 251 2.519771 TCATGATCAAGGGCTTGCTT 57.480 45.000 0.00 0.00 40.24 3.91
251 252 3.650281 TCATGATCAAGGGCTTGCTTA 57.350 42.857 0.00 0.00 40.24 3.09
252 253 3.282021 TCATGATCAAGGGCTTGCTTAC 58.718 45.455 0.00 0.00 40.24 2.34
253 254 1.737838 TGATCAAGGGCTTGCTTACG 58.262 50.000 0.00 0.00 40.24 3.18
254 255 1.017387 GATCAAGGGCTTGCTTACGG 58.983 55.000 0.00 0.00 40.24 4.02
255 256 1.032114 ATCAAGGGCTTGCTTACGGC 61.032 55.000 0.00 0.00 40.24 5.68
256 257 2.746277 AAGGGCTTGCTTACGGCG 60.746 61.111 4.80 4.80 45.43 6.46
257 258 3.546714 AAGGGCTTGCTTACGGCGT 62.547 57.895 19.64 19.64 45.43 5.68
258 259 3.497031 GGGCTTGCTTACGGCGTC 61.497 66.667 19.21 2.21 45.43 5.19
259 260 2.740826 GGCTTGCTTACGGCGTCA 60.741 61.111 19.21 4.20 45.43 4.35
260 261 2.106683 GGCTTGCTTACGGCGTCAT 61.107 57.895 19.21 0.00 45.43 3.06
261 262 1.644786 GGCTTGCTTACGGCGTCATT 61.645 55.000 19.21 0.00 45.43 2.57
262 263 0.168128 GCTTGCTTACGGCGTCATTT 59.832 50.000 19.21 0.00 45.43 2.32
263 264 1.882198 CTTGCTTACGGCGTCATTTG 58.118 50.000 19.21 4.50 45.43 2.32
264 265 1.463056 CTTGCTTACGGCGTCATTTGA 59.537 47.619 19.21 0.00 45.43 2.69
265 266 1.075542 TGCTTACGGCGTCATTTGAG 58.924 50.000 19.21 7.42 45.43 3.02
266 267 0.373716 GCTTACGGCGTCATTTGAGG 59.626 55.000 19.21 0.00 0.00 3.86
267 268 2.004583 CTTACGGCGTCATTTGAGGA 57.995 50.000 19.21 0.00 32.08 3.71
268 269 1.927174 CTTACGGCGTCATTTGAGGAG 59.073 52.381 19.21 0.00 32.08 3.69
269 270 0.892755 TACGGCGTCATTTGAGGAGT 59.107 50.000 19.21 5.94 32.08 3.85
270 271 0.034896 ACGGCGTCATTTGAGGAGTT 59.965 50.000 6.77 0.00 32.08 3.01
271 272 0.721718 CGGCGTCATTTGAGGAGTTC 59.278 55.000 0.00 0.00 32.08 3.01
272 273 1.087501 GGCGTCATTTGAGGAGTTCC 58.912 55.000 4.54 0.00 32.08 3.62
273 274 0.721718 GCGTCATTTGAGGAGTTCCG 59.278 55.000 4.54 0.00 42.08 4.30
274 275 1.359848 CGTCATTTGAGGAGTTCCGG 58.640 55.000 0.00 0.00 42.08 5.14
275 276 1.337823 CGTCATTTGAGGAGTTCCGGT 60.338 52.381 0.00 0.00 42.08 5.28
276 277 2.347731 GTCATTTGAGGAGTTCCGGTC 58.652 52.381 0.00 0.00 42.08 4.79
277 278 1.278127 TCATTTGAGGAGTTCCGGTCC 59.722 52.381 0.00 0.22 42.08 4.46
278 279 1.003118 CATTTGAGGAGTTCCGGTCCA 59.997 52.381 11.86 0.00 42.08 4.02
279 280 0.685097 TTTGAGGAGTTCCGGTCCAG 59.315 55.000 11.86 0.00 42.08 3.86
280 281 0.471211 TTGAGGAGTTCCGGTCCAGT 60.471 55.000 11.86 0.00 42.08 4.00
281 282 0.898789 TGAGGAGTTCCGGTCCAGTC 60.899 60.000 11.86 5.10 42.08 3.51
282 283 0.612453 GAGGAGTTCCGGTCCAGTCT 60.612 60.000 11.86 0.00 42.08 3.24
283 284 0.178929 AGGAGTTCCGGTCCAGTCTT 60.179 55.000 11.86 0.00 42.08 3.01
284 285 0.685660 GGAGTTCCGGTCCAGTCTTT 59.314 55.000 0.00 0.00 33.84 2.52
285 286 1.608283 GGAGTTCCGGTCCAGTCTTTG 60.608 57.143 0.00 0.00 33.84 2.77
286 287 0.250338 AGTTCCGGTCCAGTCTTTGC 60.250 55.000 0.00 0.00 0.00 3.68
287 288 1.301401 TTCCGGTCCAGTCTTTGCG 60.301 57.895 0.00 0.00 0.00 4.85
288 289 2.030562 CCGGTCCAGTCTTTGCGT 59.969 61.111 0.00 0.00 0.00 5.24
289 290 2.027625 CCGGTCCAGTCTTTGCGTC 61.028 63.158 0.00 0.00 0.00 5.19
290 291 1.300620 CGGTCCAGTCTTTGCGTCA 60.301 57.895 0.00 0.00 0.00 4.35
291 292 1.284982 CGGTCCAGTCTTTGCGTCAG 61.285 60.000 0.00 0.00 0.00 3.51
292 293 1.569479 GGTCCAGTCTTTGCGTCAGC 61.569 60.000 0.00 0.00 45.41 4.26
293 294 1.301716 TCCAGTCTTTGCGTCAGCC 60.302 57.895 0.00 0.00 44.33 4.85
294 295 1.597854 CCAGTCTTTGCGTCAGCCA 60.598 57.895 0.00 0.00 44.33 4.75
295 296 1.571460 CAGTCTTTGCGTCAGCCAC 59.429 57.895 0.00 0.00 44.33 5.01
304 305 4.008933 GTCAGCCACGGTGCCTCT 62.009 66.667 1.68 0.00 0.00 3.69
305 306 3.241530 TCAGCCACGGTGCCTCTT 61.242 61.111 1.68 0.00 0.00 2.85
306 307 2.743928 CAGCCACGGTGCCTCTTC 60.744 66.667 1.68 0.00 0.00 2.87
307 308 4.379243 AGCCACGGTGCCTCTTCG 62.379 66.667 1.68 0.00 0.00 3.79
308 309 4.373116 GCCACGGTGCCTCTTCGA 62.373 66.667 1.68 0.00 0.00 3.71
309 310 2.432628 CCACGGTGCCTCTTCGAC 60.433 66.667 1.68 0.00 0.00 4.20
310 311 2.651361 CACGGTGCCTCTTCGACT 59.349 61.111 0.00 0.00 0.00 4.18
311 312 1.734477 CACGGTGCCTCTTCGACTG 60.734 63.158 0.00 0.00 0.00 3.51
312 313 2.811317 CGGTGCCTCTTCGACTGC 60.811 66.667 0.00 0.00 0.00 4.40
313 314 2.811317 GGTGCCTCTTCGACTGCG 60.811 66.667 0.00 0.00 39.35 5.18
314 315 3.482783 GTGCCTCTTCGACTGCGC 61.483 66.667 0.00 0.00 37.46 6.09
317 318 3.175240 CCTCTTCGACTGCGCGTG 61.175 66.667 8.43 3.52 37.46 5.34
318 319 3.175240 CTCTTCGACTGCGCGTGG 61.175 66.667 8.43 8.56 37.46 4.94
319 320 4.717629 TCTTCGACTGCGCGTGGG 62.718 66.667 8.43 0.23 37.46 4.61
348 349 5.562298 GGGGGTGAGTATATGTGTTATGT 57.438 43.478 0.00 0.00 0.00 2.29
349 350 6.675413 GGGGGTGAGTATATGTGTTATGTA 57.325 41.667 0.00 0.00 0.00 2.29
350 351 6.461640 GGGGGTGAGTATATGTGTTATGTAC 58.538 44.000 0.00 0.00 0.00 2.90
351 352 6.042322 GGGGGTGAGTATATGTGTTATGTACA 59.958 42.308 0.00 0.00 0.00 2.90
352 353 7.256547 GGGGGTGAGTATATGTGTTATGTACAT 60.257 40.741 13.93 13.93 39.39 2.29
353 354 8.809066 GGGGTGAGTATATGTGTTATGTACATA 58.191 37.037 11.62 11.62 43.05 2.29
359 360 9.923143 AGTATATGTGTTATGTACATATTGCGT 57.077 29.630 16.16 11.96 44.92 5.24
364 365 7.856556 TGTGTTATGTACATATTGCGTATTGG 58.143 34.615 16.16 0.00 39.39 3.16
365 366 7.041712 TGTGTTATGTACATATTGCGTATTGGG 60.042 37.037 16.16 0.00 39.39 4.12
366 367 6.072948 TGTTATGTACATATTGCGTATTGGGC 60.073 38.462 16.16 0.00 0.00 5.36
367 368 3.142951 TGTACATATTGCGTATTGGGCC 58.857 45.455 0.00 0.00 0.00 5.80
368 369 1.616159 ACATATTGCGTATTGGGCCC 58.384 50.000 17.59 17.59 0.00 5.80
369 370 0.521291 CATATTGCGTATTGGGCCCG 59.479 55.000 19.37 5.50 0.00 6.13
374 375 4.929707 CGTATTGGGCCCGCCTCC 62.930 72.222 19.37 2.46 36.10 4.30
375 376 3.489513 GTATTGGGCCCGCCTCCT 61.490 66.667 19.37 0.00 36.10 3.69
376 377 2.144738 GTATTGGGCCCGCCTCCTA 61.145 63.158 19.37 0.00 36.10 2.94
377 378 1.384783 TATTGGGCCCGCCTCCTAA 60.385 57.895 19.37 3.69 36.10 2.69
378 379 0.770557 TATTGGGCCCGCCTCCTAAT 60.771 55.000 19.37 11.89 38.21 1.73
379 380 1.655114 ATTGGGCCCGCCTCCTAATT 61.655 55.000 19.37 0.00 31.81 1.40
380 381 1.869824 TTGGGCCCGCCTCCTAATTT 61.870 55.000 19.37 0.00 36.10 1.82
381 382 1.528542 GGGCCCGCCTCCTAATTTC 60.529 63.158 5.69 0.00 36.10 2.17
382 383 1.532238 GGCCCGCCTCCTAATTTCT 59.468 57.895 0.00 0.00 0.00 2.52
383 384 0.106669 GGCCCGCCTCCTAATTTCTT 60.107 55.000 0.00 0.00 0.00 2.52
384 385 1.025041 GCCCGCCTCCTAATTTCTTG 58.975 55.000 0.00 0.00 0.00 3.02
385 386 1.682087 GCCCGCCTCCTAATTTCTTGT 60.682 52.381 0.00 0.00 0.00 3.16
386 387 2.420967 GCCCGCCTCCTAATTTCTTGTA 60.421 50.000 0.00 0.00 0.00 2.41
387 388 3.747708 GCCCGCCTCCTAATTTCTTGTAT 60.748 47.826 0.00 0.00 0.00 2.29
388 389 4.504340 GCCCGCCTCCTAATTTCTTGTATA 60.504 45.833 0.00 0.00 0.00 1.47
389 390 5.238583 CCCGCCTCCTAATTTCTTGTATAG 58.761 45.833 0.00 0.00 0.00 1.31
390 391 5.221661 CCCGCCTCCTAATTTCTTGTATAGT 60.222 44.000 0.00 0.00 0.00 2.12
391 392 6.289064 CCGCCTCCTAATTTCTTGTATAGTT 58.711 40.000 0.00 0.00 0.00 2.24
392 393 6.202954 CCGCCTCCTAATTTCTTGTATAGTTG 59.797 42.308 0.00 0.00 0.00 3.16
393 394 6.984474 CGCCTCCTAATTTCTTGTATAGTTGA 59.016 38.462 0.00 0.00 0.00 3.18
394 395 7.169982 CGCCTCCTAATTTCTTGTATAGTTGAG 59.830 40.741 0.00 0.00 0.00 3.02
395 396 8.204836 GCCTCCTAATTTCTTGTATAGTTGAGA 58.795 37.037 0.00 0.00 0.00 3.27
399 400 9.197694 CCTAATTTCTTGTATAGTTGAGATCCG 57.802 37.037 0.00 0.00 0.00 4.18
400 401 9.751542 CTAATTTCTTGTATAGTTGAGATCCGT 57.248 33.333 0.00 0.00 0.00 4.69
401 402 8.425577 AATTTCTTGTATAGTTGAGATCCGTG 57.574 34.615 0.00 0.00 0.00 4.94
402 403 5.515797 TCTTGTATAGTTGAGATCCGTGG 57.484 43.478 0.00 0.00 0.00 4.94
403 404 3.728076 TGTATAGTTGAGATCCGTGGC 57.272 47.619 0.00 0.00 0.00 5.01
404 405 2.364324 TGTATAGTTGAGATCCGTGGCC 59.636 50.000 0.00 0.00 0.00 5.36
405 406 0.759346 ATAGTTGAGATCCGTGGCCC 59.241 55.000 0.00 0.00 0.00 5.80
406 407 0.616395 TAGTTGAGATCCGTGGCCCA 60.616 55.000 0.00 0.00 0.00 5.36
407 408 1.224592 GTTGAGATCCGTGGCCCAT 59.775 57.895 0.00 0.00 0.00 4.00
408 409 0.815615 GTTGAGATCCGTGGCCCATC 60.816 60.000 0.00 0.00 0.00 3.51
409 410 0.982852 TTGAGATCCGTGGCCCATCT 60.983 55.000 0.00 1.33 0.00 2.90
410 411 0.982852 TGAGATCCGTGGCCCATCTT 60.983 55.000 0.00 0.00 0.00 2.40
411 412 0.181350 GAGATCCGTGGCCCATCTTT 59.819 55.000 0.00 0.00 0.00 2.52
412 413 0.107017 AGATCCGTGGCCCATCTTTG 60.107 55.000 0.00 0.00 0.00 2.77
413 414 0.394352 GATCCGTGGCCCATCTTTGT 60.394 55.000 0.00 0.00 0.00 2.83
414 415 0.916086 ATCCGTGGCCCATCTTTGTA 59.084 50.000 0.00 0.00 0.00 2.41
415 416 0.035820 TCCGTGGCCCATCTTTGTAC 60.036 55.000 0.00 0.00 0.00 2.90
416 417 0.322098 CCGTGGCCCATCTTTGTACA 60.322 55.000 0.00 0.00 0.00 2.90
417 418 1.681780 CCGTGGCCCATCTTTGTACAT 60.682 52.381 0.00 0.00 0.00 2.29
418 419 1.670811 CGTGGCCCATCTTTGTACATC 59.329 52.381 0.00 0.00 0.00 3.06
419 420 2.722094 GTGGCCCATCTTTGTACATCA 58.278 47.619 0.00 0.00 0.00 3.07
420 421 3.290710 GTGGCCCATCTTTGTACATCAT 58.709 45.455 0.00 0.00 0.00 2.45
421 422 4.460263 GTGGCCCATCTTTGTACATCATA 58.540 43.478 0.00 0.00 0.00 2.15
422 423 5.072741 GTGGCCCATCTTTGTACATCATAT 58.927 41.667 0.00 0.00 0.00 1.78
423 424 6.237901 GTGGCCCATCTTTGTACATCATATA 58.762 40.000 0.00 0.00 0.00 0.86
424 425 6.886459 GTGGCCCATCTTTGTACATCATATAT 59.114 38.462 0.00 0.00 0.00 0.86
425 426 8.046708 GTGGCCCATCTTTGTACATCATATATA 58.953 37.037 0.00 0.00 0.00 0.86
426 427 8.046708 TGGCCCATCTTTGTACATCATATATAC 58.953 37.037 0.00 0.00 0.00 1.47
427 428 7.224753 GGCCCATCTTTGTACATCATATATACG 59.775 40.741 0.00 0.00 0.00 3.06
428 429 7.764443 GCCCATCTTTGTACATCATATATACGT 59.236 37.037 0.00 0.00 0.00 3.57
429 430 9.087424 CCCATCTTTGTACATCATATATACGTG 57.913 37.037 0.00 0.00 0.00 4.49
430 431 8.595533 CCATCTTTGTACATCATATATACGTGC 58.404 37.037 0.00 0.00 0.00 5.34
431 432 9.139174 CATCTTTGTACATCATATATACGTGCA 57.861 33.333 0.00 0.00 0.00 4.57
432 433 9.875691 ATCTTTGTACATCATATATACGTGCAT 57.124 29.630 0.00 0.00 0.00 3.96
436 437 8.574196 TGTACATCATATATACGTGCATATGC 57.426 34.615 21.09 21.09 35.82 3.14
452 453 6.712241 GCATATGCACGAAGAGTAATACAT 57.288 37.500 22.84 0.00 41.59 2.29
453 454 6.756176 GCATATGCACGAAGAGTAATACATC 58.244 40.000 22.84 0.00 41.59 3.06
454 455 6.453003 GCATATGCACGAAGAGTAATACATCG 60.453 42.308 22.84 10.27 41.59 3.84
455 456 4.365899 TGCACGAAGAGTAATACATCGT 57.634 40.909 11.27 11.27 46.54 3.73
458 459 4.365899 ACGAAGAGTAATACATCGTGCA 57.634 40.909 14.71 0.00 44.20 4.57
459 460 4.740268 ACGAAGAGTAATACATCGTGCAA 58.260 39.130 14.71 0.00 44.20 4.08
460 461 5.348986 ACGAAGAGTAATACATCGTGCAAT 58.651 37.500 14.71 0.00 44.20 3.56
461 462 5.459107 ACGAAGAGTAATACATCGTGCAATC 59.541 40.000 14.71 0.00 44.20 2.67
462 463 5.458779 CGAAGAGTAATACATCGTGCAATCA 59.541 40.000 0.00 0.00 0.00 2.57
463 464 6.144563 CGAAGAGTAATACATCGTGCAATCAT 59.855 38.462 0.00 0.00 0.00 2.45
464 465 7.326063 CGAAGAGTAATACATCGTGCAATCATA 59.674 37.037 0.00 0.00 0.00 2.15
465 466 7.875316 AGAGTAATACATCGTGCAATCATAC 57.125 36.000 0.00 0.00 0.00 2.39
466 467 7.433680 AGAGTAATACATCGTGCAATCATACA 58.566 34.615 0.00 0.00 0.00 2.29
467 468 7.926018 AGAGTAATACATCGTGCAATCATACAA 59.074 33.333 0.00 0.00 0.00 2.41
468 469 8.076714 AGTAATACATCGTGCAATCATACAAG 57.923 34.615 0.00 0.00 0.00 3.16
469 470 6.925610 AATACATCGTGCAATCATACAAGT 57.074 33.333 0.00 0.00 0.00 3.16
470 471 8.974408 GTAATACATCGTGCAATCATACAAGTA 58.026 33.333 0.00 0.00 0.00 2.24
471 472 5.973651 ACATCGTGCAATCATACAAGTAG 57.026 39.130 0.00 0.00 0.00 2.57
472 473 4.271049 ACATCGTGCAATCATACAAGTAGC 59.729 41.667 0.00 0.00 0.00 3.58
473 474 3.855858 TCGTGCAATCATACAAGTAGCA 58.144 40.909 0.00 0.00 0.00 3.49
474 475 4.249661 TCGTGCAATCATACAAGTAGCAA 58.750 39.130 0.00 0.00 31.78 3.91
475 476 4.693095 TCGTGCAATCATACAAGTAGCAAA 59.307 37.500 0.00 0.00 31.78 3.68
476 477 5.180304 TCGTGCAATCATACAAGTAGCAAAA 59.820 36.000 0.00 0.00 31.78 2.44
477 478 5.855925 CGTGCAATCATACAAGTAGCAAAAA 59.144 36.000 0.00 0.00 31.78 1.94
495 496 0.598065 AAAAGGATGACGTTGGCTGC 59.402 50.000 0.00 0.00 0.00 5.25
496 497 1.244019 AAAGGATGACGTTGGCTGCC 61.244 55.000 12.87 12.87 0.00 4.85
497 498 3.134127 GGATGACGTTGGCTGCCC 61.134 66.667 17.53 0.00 0.00 5.36
498 499 3.499737 GATGACGTTGGCTGCCCG 61.500 66.667 17.53 15.79 0.00 6.13
499 500 4.329545 ATGACGTTGGCTGCCCGT 62.330 61.111 20.33 20.33 37.56 5.28
502 503 4.555709 ACGTTGGCTGCCCGTCAA 62.556 61.111 17.53 0.00 34.19 3.18
505 506 3.884774 TTGGCTGCCCGTCAACCT 61.885 61.111 17.53 0.00 30.95 3.50
506 507 2.521451 TTGGCTGCCCGTCAACCTA 61.521 57.895 17.53 0.00 30.95 3.08
507 508 2.436115 GGCTGCCCGTCAACCTAC 60.436 66.667 7.66 0.00 0.00 3.18
508 509 2.345991 GCTGCCCGTCAACCTACA 59.654 61.111 0.00 0.00 0.00 2.74
509 510 1.302192 GCTGCCCGTCAACCTACAA 60.302 57.895 0.00 0.00 0.00 2.41
510 511 1.574702 GCTGCCCGTCAACCTACAAC 61.575 60.000 0.00 0.00 0.00 3.32
511 512 1.289109 CTGCCCGTCAACCTACAACG 61.289 60.000 0.00 0.00 36.22 4.10
514 515 3.152703 CGTCAACCTACAACGGCG 58.847 61.111 4.80 4.80 32.96 6.46
515 516 2.377310 CGTCAACCTACAACGGCGG 61.377 63.158 13.24 0.00 32.96 6.13
516 517 1.301165 GTCAACCTACAACGGCGGT 60.301 57.895 13.24 0.00 0.00 5.68
517 518 0.038343 GTCAACCTACAACGGCGGTA 60.038 55.000 13.24 3.63 0.00 4.02
518 519 0.038343 TCAACCTACAACGGCGGTAC 60.038 55.000 13.24 0.00 0.00 3.34
543 544 1.228190 ACAACCCTACCACCAACCTT 58.772 50.000 0.00 0.00 0.00 3.50
550 551 1.073923 CTACCACCAACCTTCTTGGCT 59.926 52.381 0.00 0.00 43.23 4.75
553 554 1.402787 CACCAACCTTCTTGGCTGTT 58.597 50.000 0.00 0.00 43.23 3.16
554 555 1.756538 CACCAACCTTCTTGGCTGTTT 59.243 47.619 0.00 0.00 43.23 2.83
559 560 1.410153 ACCTTCTTGGCTGTTTGCAAG 59.590 47.619 0.00 0.00 45.15 4.01
563 564 0.319297 CTTGGCTGTTTGCAAGAGGC 60.319 55.000 20.81 20.81 45.96 4.70
566 567 0.892814 GGCTGTTTGCAAGAGGCTCT 60.893 55.000 12.24 12.24 43.00 4.09
618 620 0.035152 AGATCCGGCTGAACATTGCA 60.035 50.000 0.00 0.00 0.00 4.08
619 621 0.810648 GATCCGGCTGAACATTGCAA 59.189 50.000 0.00 0.00 0.00 4.08
620 622 1.202114 GATCCGGCTGAACATTGCAAA 59.798 47.619 1.71 0.00 0.00 3.68
708 2827 0.820871 ACCTGCGTTTTCCTTTTGCA 59.179 45.000 0.00 0.00 0.00 4.08
709 2828 1.412343 ACCTGCGTTTTCCTTTTGCAT 59.588 42.857 0.00 0.00 34.66 3.96
720 2844 5.885230 TTCCTTTTGCATATGTCTCACAG 57.115 39.130 4.29 0.00 0.00 3.66
806 2933 4.537015 AGAACTTTGCCGAAAAAGAATCG 58.463 39.130 14.36 0.00 39.12 3.34
1227 3371 6.112058 AGATTTCAGACAGAGAATTAGCACC 58.888 40.000 0.00 0.00 0.00 5.01
1270 3414 2.027625 CGCTGTGTTCTTCGGGGAC 61.028 63.158 0.00 0.00 0.00 4.46
1467 3611 4.904241 AGAAGATTGTTGACAAGAGGAGG 58.096 43.478 2.77 0.00 39.47 4.30
1578 3722 2.919856 AGTCACTCCCGCTGCAGT 60.920 61.111 16.64 0.00 0.00 4.40
1765 3909 0.898320 GAGTGGAAGTAGCAGGAGCA 59.102 55.000 0.00 0.00 45.49 4.26
1808 3952 2.554032 GCAAGAGCAAAAGTAGGAAGCA 59.446 45.455 0.00 0.00 41.58 3.91
1920 4064 5.592054 TCTGTTGAGGATGTTTATAGCGAG 58.408 41.667 0.00 0.00 0.00 5.03
2161 4305 4.607239 TGGTACAGGGAAGGAAGTACTAG 58.393 47.826 0.00 0.00 37.55 2.57
2242 4386 1.583556 TCAGAGGCAGGGAAGCAATA 58.416 50.000 0.00 0.00 35.83 1.90
2280 4424 6.097554 ACTCTACTCGATCACCTGAATTTGAT 59.902 38.462 0.00 0.00 35.08 2.57
2376 4520 2.494471 TGGTGATACTTGTGGTCCTACG 59.506 50.000 0.00 0.00 0.00 3.51
2384 4528 1.301401 GTGGTCCTACGCAACAGCA 60.301 57.895 0.00 0.00 0.00 4.41
2406 4550 2.696187 GGGAAGCGGACTAGAAGAGATT 59.304 50.000 0.00 0.00 0.00 2.40
2624 4768 7.606456 CAGTACATTTACAACAATCCCTACAGT 59.394 37.037 0.00 0.00 0.00 3.55
2737 4881 6.942005 TGATAGAAAGATTGGTGAAGCTTCAA 59.058 34.615 29.99 15.96 36.79 2.69
3122 5280 2.623889 ACTCTTGTAGCACGTGAACTCT 59.376 45.455 22.23 9.30 0.00 3.24
3140 5298 7.383843 GTGAACTCTCTTTTGTTCCTTCTAGAG 59.616 40.741 0.00 0.00 41.10 2.43
3158 5316 4.839668 AGAGATCCTGCACGACTAATAC 57.160 45.455 0.00 0.00 0.00 1.89
3161 5319 4.683832 AGATCCTGCACGACTAATACAAC 58.316 43.478 0.00 0.00 0.00 3.32
3383 5542 7.284074 TGGATTCTTGTAACCAGTAAACTTGA 58.716 34.615 0.00 0.00 0.00 3.02
3432 5591 7.789026 ACTGGTCTACTACTTAAAACTGTTGT 58.211 34.615 0.00 0.00 0.00 3.32
3541 5700 4.515567 GGAATAATCCGTGGTTTGGAGATC 59.484 45.833 0.00 0.00 39.30 2.75
3595 5762 5.446143 TTGTTTATTTGGCGTTGATCACT 57.554 34.783 0.00 0.00 0.00 3.41
3597 5764 4.277174 TGTTTATTTGGCGTTGATCACTGT 59.723 37.500 0.00 0.00 0.00 3.55
3600 5767 2.831685 TTGGCGTTGATCACTGTAGT 57.168 45.000 0.00 0.00 0.00 2.73
3619 5786 7.174772 ACTGTAGTTGTATGTTTGCATCATGAA 59.825 33.333 0.00 5.40 36.58 2.57
3705 5882 0.108424 CGCTAGCCTGCCCAGATATC 60.108 60.000 9.66 0.00 0.00 1.63
3895 6073 7.062839 GCTGCTGTAACAGTATATGATTAGAGC 59.937 40.741 11.75 11.75 39.48 4.09
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
32 33 3.007831 ACAAGGAAAGAGAGCTCCTGAAG 59.992 47.826 10.93 0.00 41.40 3.02
33 34 2.975489 ACAAGGAAAGAGAGCTCCTGAA 59.025 45.455 10.93 0.00 41.40 3.02
34 35 2.614259 ACAAGGAAAGAGAGCTCCTGA 58.386 47.619 10.93 0.00 41.40 3.86
35 36 3.072944 CAACAAGGAAAGAGAGCTCCTG 58.927 50.000 10.93 0.00 41.40 3.86
36 37 2.975489 TCAACAAGGAAAGAGAGCTCCT 59.025 45.455 10.93 4.36 44.26 3.69
37 38 3.409026 TCAACAAGGAAAGAGAGCTCC 57.591 47.619 10.93 1.70 0.00 4.70
38 39 3.616379 CGATCAACAAGGAAAGAGAGCTC 59.384 47.826 5.27 5.27 0.00 4.09
39 40 3.007398 ACGATCAACAAGGAAAGAGAGCT 59.993 43.478 0.00 0.00 0.00 4.09
40 41 3.124297 CACGATCAACAAGGAAAGAGAGC 59.876 47.826 0.00 0.00 0.00 4.09
41 42 3.124297 GCACGATCAACAAGGAAAGAGAG 59.876 47.826 0.00 0.00 0.00 3.20
42 43 3.067106 GCACGATCAACAAGGAAAGAGA 58.933 45.455 0.00 0.00 0.00 3.10
43 44 2.160417 GGCACGATCAACAAGGAAAGAG 59.840 50.000 0.00 0.00 0.00 2.85
44 45 2.151202 GGCACGATCAACAAGGAAAGA 58.849 47.619 0.00 0.00 0.00 2.52
45 46 1.879380 TGGCACGATCAACAAGGAAAG 59.121 47.619 0.00 0.00 0.00 2.62
46 47 1.606668 GTGGCACGATCAACAAGGAAA 59.393 47.619 0.00 0.00 0.00 3.13
47 48 1.234821 GTGGCACGATCAACAAGGAA 58.765 50.000 0.00 0.00 0.00 3.36
48 49 0.948623 CGTGGCACGATCAACAAGGA 60.949 55.000 34.85 0.00 46.05 3.36
49 50 0.948623 TCGTGGCACGATCAACAAGG 60.949 55.000 36.29 7.06 46.73 3.61
50 51 2.527671 TCGTGGCACGATCAACAAG 58.472 52.632 36.29 7.84 46.73 3.16
51 52 4.760757 TCGTGGCACGATCAACAA 57.239 50.000 36.29 14.88 46.73 2.83
59 60 0.802222 CAGTAGACCATCGTGGCACG 60.802 60.000 32.75 32.75 42.67 5.34
60 61 1.084370 GCAGTAGACCATCGTGGCAC 61.084 60.000 7.79 7.79 42.67 5.01
61 62 1.218047 GCAGTAGACCATCGTGGCA 59.782 57.895 4.23 0.00 42.67 4.92
62 63 1.878522 CGCAGTAGACCATCGTGGC 60.879 63.158 4.23 0.00 42.67 5.01
63 64 0.525668 GTCGCAGTAGACCATCGTGG 60.526 60.000 2.92 2.92 45.02 4.94
64 65 0.170339 TGTCGCAGTAGACCATCGTG 59.830 55.000 0.00 0.00 40.26 4.35
65 66 0.885879 TTGTCGCAGTAGACCATCGT 59.114 50.000 0.00 0.00 40.26 3.73
66 67 1.550065 CTTGTCGCAGTAGACCATCG 58.450 55.000 0.00 0.00 40.26 3.84
67 68 1.204941 ACCTTGTCGCAGTAGACCATC 59.795 52.381 0.00 0.00 40.26 3.51
68 69 1.204941 GACCTTGTCGCAGTAGACCAT 59.795 52.381 0.00 0.00 40.26 3.55
69 70 0.601558 GACCTTGTCGCAGTAGACCA 59.398 55.000 0.00 0.00 40.26 4.02
70 71 0.889306 AGACCTTGTCGCAGTAGACC 59.111 55.000 0.00 0.00 40.26 3.85
71 72 1.466024 CGAGACCTTGTCGCAGTAGAC 60.466 57.143 0.00 0.00 41.30 2.59
72 73 0.803117 CGAGACCTTGTCGCAGTAGA 59.197 55.000 0.00 0.00 37.67 2.59
73 74 0.179161 CCGAGACCTTGTCGCAGTAG 60.179 60.000 0.00 0.00 37.67 2.57
74 75 1.880894 CCGAGACCTTGTCGCAGTA 59.119 57.895 0.00 0.00 37.67 2.74
75 76 2.651361 CCGAGACCTTGTCGCAGT 59.349 61.111 0.00 0.00 37.67 4.40
76 77 2.811317 GCCGAGACCTTGTCGCAG 60.811 66.667 0.00 0.00 37.67 5.18
77 78 4.717629 CGCCGAGACCTTGTCGCA 62.718 66.667 0.00 0.00 37.67 5.10
79 80 3.966026 GACCGCCGAGACCTTGTCG 62.966 68.421 0.00 0.00 37.67 4.35
80 81 1.310933 TAGACCGCCGAGACCTTGTC 61.311 60.000 0.00 0.00 0.00 3.18
81 82 1.303888 TAGACCGCCGAGACCTTGT 60.304 57.895 0.00 0.00 0.00 3.16
82 83 1.139095 GTAGACCGCCGAGACCTTG 59.861 63.158 0.00 0.00 0.00 3.61
83 84 2.050934 GGTAGACCGCCGAGACCTT 61.051 63.158 0.00 0.00 0.00 3.50
84 85 2.439883 GGTAGACCGCCGAGACCT 60.440 66.667 0.00 0.00 0.00 3.85
85 86 2.439883 AGGTAGACCGCCGAGACC 60.440 66.667 0.00 0.00 42.08 3.85
86 87 1.031029 AAGAGGTAGACCGCCGAGAC 61.031 60.000 0.00 0.00 42.08 3.36
87 88 0.747283 GAAGAGGTAGACCGCCGAGA 60.747 60.000 0.00 0.00 42.08 4.04
88 89 1.728672 GAAGAGGTAGACCGCCGAG 59.271 63.158 0.00 0.00 42.08 4.63
89 90 2.110967 CGAAGAGGTAGACCGCCGA 61.111 63.158 0.00 0.00 42.08 5.54
90 91 2.408022 CGAAGAGGTAGACCGCCG 59.592 66.667 0.00 0.00 42.08 6.46
91 92 1.099879 TAGCGAAGAGGTAGACCGCC 61.100 60.000 0.00 0.00 46.09 6.13
92 93 0.737219 TTAGCGAAGAGGTAGACCGC 59.263 55.000 0.00 0.00 45.39 5.68
93 94 1.065251 GGTTAGCGAAGAGGTAGACCG 59.935 57.143 0.00 0.00 42.08 4.79
94 95 1.408340 GGGTTAGCGAAGAGGTAGACC 59.592 57.143 0.00 0.00 35.36 3.85
95 96 1.065251 CGGGTTAGCGAAGAGGTAGAC 59.935 57.143 0.00 0.00 33.95 2.59
96 97 1.386533 CGGGTTAGCGAAGAGGTAGA 58.613 55.000 0.00 0.00 33.95 2.59
97 98 0.384669 CCGGGTTAGCGAAGAGGTAG 59.615 60.000 0.00 0.00 33.95 3.18
98 99 0.323725 ACCGGGTTAGCGAAGAGGTA 60.324 55.000 6.32 0.00 0.00 3.08
99 100 1.608627 ACCGGGTTAGCGAAGAGGT 60.609 57.895 6.32 0.00 0.00 3.85
100 101 1.153628 CACCGGGTTAGCGAAGAGG 60.154 63.158 6.32 0.00 0.00 3.69
101 102 1.810030 GCACCGGGTTAGCGAAGAG 60.810 63.158 6.32 0.00 0.00 2.85
102 103 1.895020 ATGCACCGGGTTAGCGAAGA 61.895 55.000 6.32 0.00 0.00 2.87
103 104 1.429148 GATGCACCGGGTTAGCGAAG 61.429 60.000 6.32 0.00 0.00 3.79
104 105 1.448893 GATGCACCGGGTTAGCGAA 60.449 57.895 6.32 0.00 0.00 4.70
105 106 1.966901 ATGATGCACCGGGTTAGCGA 61.967 55.000 6.32 0.00 0.00 4.93
106 107 1.498865 GATGATGCACCGGGTTAGCG 61.499 60.000 6.32 0.00 0.00 4.26
107 108 1.498865 CGATGATGCACCGGGTTAGC 61.499 60.000 6.32 4.80 0.00 3.09
108 109 0.104120 TCGATGATGCACCGGGTTAG 59.896 55.000 6.32 0.00 0.00 2.34
109 110 0.179094 GTCGATGATGCACCGGGTTA 60.179 55.000 6.32 0.00 0.00 2.85
110 111 1.449601 GTCGATGATGCACCGGGTT 60.450 57.895 6.32 0.00 0.00 4.11
111 112 2.186903 GTCGATGATGCACCGGGT 59.813 61.111 6.32 0.00 0.00 5.28
112 113 2.961721 CGTCGATGATGCACCGGG 60.962 66.667 6.32 0.00 0.00 5.73
113 114 2.961721 CCGTCGATGATGCACCGG 60.962 66.667 6.11 0.00 0.00 5.28
114 115 2.104132 TCCGTCGATGATGCACCG 59.896 61.111 6.11 0.00 0.00 4.94
115 116 1.883084 GGTCCGTCGATGATGCACC 60.883 63.158 6.11 2.93 0.00 5.01
116 117 0.739462 TTGGTCCGTCGATGATGCAC 60.739 55.000 6.11 0.00 0.00 4.57
117 118 0.460109 CTTGGTCCGTCGATGATGCA 60.460 55.000 6.11 0.00 0.00 3.96
118 119 1.766143 GCTTGGTCCGTCGATGATGC 61.766 60.000 6.11 0.00 0.00 3.91
119 120 0.460109 TGCTTGGTCCGTCGATGATG 60.460 55.000 6.11 0.00 0.00 3.07
120 121 0.465705 ATGCTTGGTCCGTCGATGAT 59.534 50.000 6.11 0.00 0.00 2.45
121 122 1.107945 TATGCTTGGTCCGTCGATGA 58.892 50.000 6.11 0.00 0.00 2.92
122 123 2.154854 ATATGCTTGGTCCGTCGATG 57.845 50.000 0.00 0.00 0.00 3.84
123 124 2.102420 TCAATATGCTTGGTCCGTCGAT 59.898 45.455 0.00 0.00 0.00 3.59
124 125 1.478916 TCAATATGCTTGGTCCGTCGA 59.521 47.619 0.00 0.00 0.00 4.20
125 126 1.860950 CTCAATATGCTTGGTCCGTCG 59.139 52.381 0.00 0.00 0.00 5.12
126 127 2.906354 ACTCAATATGCTTGGTCCGTC 58.094 47.619 0.00 0.00 0.00 4.79
127 128 3.009723 CAACTCAATATGCTTGGTCCGT 58.990 45.455 0.00 0.00 0.00 4.69
128 129 2.355756 CCAACTCAATATGCTTGGTCCG 59.644 50.000 0.00 0.00 0.00 4.79
129 130 3.620488 TCCAACTCAATATGCTTGGTCC 58.380 45.455 0.00 0.00 35.58 4.46
130 131 6.150140 GGATATCCAACTCAATATGCTTGGTC 59.850 42.308 17.34 0.00 35.58 4.02
131 132 6.006449 GGATATCCAACTCAATATGCTTGGT 58.994 40.000 17.34 0.00 35.58 3.67
132 133 6.005823 TGGATATCCAACTCAATATGCTTGG 58.994 40.000 22.52 0.00 44.35 3.61
144 145 8.976694 GTTCCCGAACAAAATGGATATCCAACT 61.977 40.741 27.89 15.39 44.02 3.16
145 146 6.899613 GTTCCCGAACAAAATGGATATCCAAC 60.900 42.308 27.89 12.80 44.02 3.77
146 147 5.126384 GTTCCCGAACAAAATGGATATCCAA 59.874 40.000 27.89 12.01 44.02 3.53
147 148 4.642885 GTTCCCGAACAAAATGGATATCCA 59.357 41.667 26.49 26.49 44.48 3.41
148 149 5.183014 GTTCCCGAACAAAATGGATATCC 57.817 43.478 15.39 15.39 40.84 2.59
161 162 2.671963 GGCCACCTGTTCCCGAAC 60.672 66.667 0.00 0.46 41.50 3.95
162 163 3.961414 GGGCCACCTGTTCCCGAA 61.961 66.667 4.39 0.00 0.00 4.30
177 178 1.762708 AACACGAATATGGCCAAGGG 58.237 50.000 10.96 2.53 0.00 3.95
178 179 3.866883 AAAACACGAATATGGCCAAGG 57.133 42.857 10.96 0.00 0.00 3.61
179 180 5.092781 GTGTAAAACACGAATATGGCCAAG 58.907 41.667 10.96 1.30 39.53 3.61
180 181 5.049398 GTGTAAAACACGAATATGGCCAA 57.951 39.130 10.96 0.00 39.53 4.52
181 182 4.688511 GTGTAAAACACGAATATGGCCA 57.311 40.909 8.56 8.56 39.53 5.36
192 193 3.742882 GGAAGTAGGGACGTGTAAAACAC 59.257 47.826 0.00 0.01 45.26 3.32
193 194 3.244181 GGGAAGTAGGGACGTGTAAAACA 60.244 47.826 0.00 0.00 0.00 2.83
194 195 3.244181 TGGGAAGTAGGGACGTGTAAAAC 60.244 47.826 0.00 0.00 0.00 2.43
195 196 2.971330 TGGGAAGTAGGGACGTGTAAAA 59.029 45.455 0.00 0.00 0.00 1.52
196 197 2.607499 TGGGAAGTAGGGACGTGTAAA 58.393 47.619 0.00 0.00 0.00 2.01
197 198 2.299867 GTTGGGAAGTAGGGACGTGTAA 59.700 50.000 0.00 0.00 0.00 2.41
198 199 1.895131 GTTGGGAAGTAGGGACGTGTA 59.105 52.381 0.00 0.00 0.00 2.90
199 200 0.683412 GTTGGGAAGTAGGGACGTGT 59.317 55.000 0.00 0.00 0.00 4.49
200 201 0.682852 TGTTGGGAAGTAGGGACGTG 59.317 55.000 0.00 0.00 0.00 4.49
201 202 1.426751 TTGTTGGGAAGTAGGGACGT 58.573 50.000 0.00 0.00 0.00 4.34
202 203 2.781681 ATTGTTGGGAAGTAGGGACG 57.218 50.000 0.00 0.00 0.00 4.79
203 204 3.056821 GCAAATTGTTGGGAAGTAGGGAC 60.057 47.826 0.00 0.00 35.10 4.46
204 205 3.161866 GCAAATTGTTGGGAAGTAGGGA 58.838 45.455 0.00 0.00 35.10 4.20
205 206 2.233676 GGCAAATTGTTGGGAAGTAGGG 59.766 50.000 0.00 0.00 35.10 3.53
206 207 2.094752 CGGCAAATTGTTGGGAAGTAGG 60.095 50.000 0.00 0.00 35.10 3.18
207 208 2.817258 TCGGCAAATTGTTGGGAAGTAG 59.183 45.455 0.00 0.00 35.10 2.57
208 209 2.865079 TCGGCAAATTGTTGGGAAGTA 58.135 42.857 0.00 0.00 35.10 2.24
209 210 1.698506 TCGGCAAATTGTTGGGAAGT 58.301 45.000 0.00 0.00 35.10 3.01
210 211 4.097741 TGATATCGGCAAATTGTTGGGAAG 59.902 41.667 0.00 0.00 35.10 3.46
211 212 4.019858 TGATATCGGCAAATTGTTGGGAA 58.980 39.130 0.00 0.00 35.10 3.97
212 213 3.625853 TGATATCGGCAAATTGTTGGGA 58.374 40.909 0.00 0.00 35.10 4.37
213 214 4.037803 TCATGATATCGGCAAATTGTTGGG 59.962 41.667 0.00 0.00 35.10 4.12
214 215 5.185668 TCATGATATCGGCAAATTGTTGG 57.814 39.130 0.00 0.00 35.10 3.77
215 216 6.440436 TGATCATGATATCGGCAAATTGTTG 58.560 36.000 8.54 0.00 37.83 3.33
216 217 6.638096 TGATCATGATATCGGCAAATTGTT 57.362 33.333 8.54 0.00 0.00 2.83
217 218 6.294342 CCTTGATCATGATATCGGCAAATTGT 60.294 38.462 8.54 0.00 0.00 2.71
218 219 6.090783 CCTTGATCATGATATCGGCAAATTG 58.909 40.000 8.54 0.00 0.00 2.32
219 220 5.184479 CCCTTGATCATGATATCGGCAAATT 59.816 40.000 8.54 0.00 0.00 1.82
220 221 4.703575 CCCTTGATCATGATATCGGCAAAT 59.296 41.667 8.54 0.00 0.00 2.32
221 222 4.074259 CCCTTGATCATGATATCGGCAAA 58.926 43.478 8.54 0.00 0.00 3.68
222 223 3.678289 CCCTTGATCATGATATCGGCAA 58.322 45.455 8.54 7.34 0.00 4.52
223 224 2.616256 GCCCTTGATCATGATATCGGCA 60.616 50.000 21.79 9.46 32.94 5.69
224 225 2.012673 GCCCTTGATCATGATATCGGC 58.987 52.381 8.54 13.14 0.00 5.54
225 226 3.623906 AGCCCTTGATCATGATATCGG 57.376 47.619 8.54 8.72 0.00 4.18
226 227 3.126514 GCAAGCCCTTGATCATGATATCG 59.873 47.826 8.54 0.00 42.93 2.92
227 228 4.333690 AGCAAGCCCTTGATCATGATATC 58.666 43.478 8.54 0.00 42.93 1.63
228 229 4.383931 AGCAAGCCCTTGATCATGATAT 57.616 40.909 8.54 0.00 42.93 1.63
229 230 3.870538 AGCAAGCCCTTGATCATGATA 57.129 42.857 8.54 0.00 42.93 2.15
230 231 2.750141 AGCAAGCCCTTGATCATGAT 57.250 45.000 8.25 8.25 42.93 2.45
231 232 2.519771 AAGCAAGCCCTTGATCATGA 57.480 45.000 11.96 0.00 42.93 3.07
232 233 2.032550 CGTAAGCAAGCCCTTGATCATG 59.967 50.000 11.96 0.00 42.93 3.07
233 234 2.292267 CGTAAGCAAGCCCTTGATCAT 58.708 47.619 11.96 0.00 42.93 2.45
234 235 1.678728 CCGTAAGCAAGCCCTTGATCA 60.679 52.381 11.96 0.00 42.93 2.92
235 236 1.017387 CCGTAAGCAAGCCCTTGATC 58.983 55.000 11.96 0.00 42.93 2.92
236 237 1.032114 GCCGTAAGCAAGCCCTTGAT 61.032 55.000 11.96 2.41 42.93 2.57
237 238 1.674322 GCCGTAAGCAAGCCCTTGA 60.674 57.895 11.96 0.00 42.93 3.02
238 239 2.877691 GCCGTAAGCAAGCCCTTG 59.122 61.111 3.70 3.70 42.97 3.61
239 240 2.746277 CGCCGTAAGCAAGCCCTT 60.746 61.111 0.00 0.00 44.04 3.95
240 241 3.952628 GACGCCGTAAGCAAGCCCT 62.953 63.158 0.00 0.00 44.04 5.19
241 242 3.497031 GACGCCGTAAGCAAGCCC 61.497 66.667 0.00 0.00 44.04 5.19
242 243 1.644786 AATGACGCCGTAAGCAAGCC 61.645 55.000 0.00 0.00 44.04 4.35
243 244 0.168128 AAATGACGCCGTAAGCAAGC 59.832 50.000 0.00 0.00 44.04 4.01
244 245 1.463056 TCAAATGACGCCGTAAGCAAG 59.537 47.619 0.00 0.00 44.04 4.01
245 246 1.463056 CTCAAATGACGCCGTAAGCAA 59.537 47.619 0.00 0.00 44.04 3.91
246 247 1.075542 CTCAAATGACGCCGTAAGCA 58.924 50.000 0.00 0.00 44.04 3.91
247 248 0.373716 CCTCAAATGACGCCGTAAGC 59.626 55.000 0.00 0.00 38.52 3.09
248 249 1.927174 CTCCTCAAATGACGCCGTAAG 59.073 52.381 0.00 0.00 0.00 2.34
249 250 1.274167 ACTCCTCAAATGACGCCGTAA 59.726 47.619 0.00 0.00 0.00 3.18
250 251 0.892755 ACTCCTCAAATGACGCCGTA 59.107 50.000 0.00 0.00 0.00 4.02
251 252 0.034896 AACTCCTCAAATGACGCCGT 59.965 50.000 0.00 0.00 0.00 5.68
252 253 0.721718 GAACTCCTCAAATGACGCCG 59.278 55.000 0.00 0.00 0.00 6.46
253 254 1.087501 GGAACTCCTCAAATGACGCC 58.912 55.000 0.00 0.00 0.00 5.68
254 255 0.721718 CGGAACTCCTCAAATGACGC 59.278 55.000 0.00 0.00 0.00 5.19
255 256 1.337823 ACCGGAACTCCTCAAATGACG 60.338 52.381 9.46 0.00 0.00 4.35
256 257 2.347731 GACCGGAACTCCTCAAATGAC 58.652 52.381 9.46 0.00 0.00 3.06
257 258 1.278127 GGACCGGAACTCCTCAAATGA 59.722 52.381 9.46 0.00 0.00 2.57
258 259 1.003118 TGGACCGGAACTCCTCAAATG 59.997 52.381 9.46 0.00 0.00 2.32
259 260 1.279271 CTGGACCGGAACTCCTCAAAT 59.721 52.381 9.46 0.00 0.00 2.32
260 261 0.685097 CTGGACCGGAACTCCTCAAA 59.315 55.000 9.46 0.00 0.00 2.69
261 262 0.471211 ACTGGACCGGAACTCCTCAA 60.471 55.000 9.46 0.00 0.00 3.02
262 263 0.898789 GACTGGACCGGAACTCCTCA 60.899 60.000 9.46 0.00 0.00 3.86
263 264 0.612453 AGACTGGACCGGAACTCCTC 60.612 60.000 9.46 0.00 0.00 3.71
264 265 0.178929 AAGACTGGACCGGAACTCCT 60.179 55.000 9.46 0.00 0.00 3.69
265 266 0.685660 AAAGACTGGACCGGAACTCC 59.314 55.000 9.46 5.31 0.00 3.85
266 267 1.797025 CAAAGACTGGACCGGAACTC 58.203 55.000 9.46 0.00 0.00 3.01
267 268 0.250338 GCAAAGACTGGACCGGAACT 60.250 55.000 9.46 3.15 0.00 3.01
268 269 1.566018 CGCAAAGACTGGACCGGAAC 61.566 60.000 9.46 0.00 0.00 3.62
269 270 1.301401 CGCAAAGACTGGACCGGAA 60.301 57.895 9.46 0.00 0.00 4.30
270 271 2.342279 CGCAAAGACTGGACCGGA 59.658 61.111 9.46 0.00 0.00 5.14
271 272 2.027625 GACGCAAAGACTGGACCGG 61.028 63.158 0.00 0.00 0.00 5.28
272 273 1.284982 CTGACGCAAAGACTGGACCG 61.285 60.000 0.00 0.00 0.00 4.79
273 274 1.569479 GCTGACGCAAAGACTGGACC 61.569 60.000 0.00 0.00 35.78 4.46
274 275 1.569479 GGCTGACGCAAAGACTGGAC 61.569 60.000 0.00 0.00 38.10 4.02
275 276 1.301716 GGCTGACGCAAAGACTGGA 60.302 57.895 0.00 0.00 38.10 3.86
276 277 1.597854 TGGCTGACGCAAAGACTGG 60.598 57.895 0.00 0.00 38.10 4.00
277 278 1.571460 GTGGCTGACGCAAAGACTG 59.429 57.895 0.00 0.00 38.10 3.51
278 279 1.956170 CGTGGCTGACGCAAAGACT 60.956 57.895 0.00 0.00 42.21 3.24
279 280 2.551270 CGTGGCTGACGCAAAGAC 59.449 61.111 0.00 0.00 42.21 3.01
291 292 4.373116 TCGAAGAGGCACCGTGGC 62.373 66.667 17.05 17.05 44.10 5.01
292 293 2.432628 GTCGAAGAGGCACCGTGG 60.433 66.667 0.00 0.00 36.95 4.94
293 294 1.734477 CAGTCGAAGAGGCACCGTG 60.734 63.158 0.00 0.00 36.95 4.94
294 295 2.651361 CAGTCGAAGAGGCACCGT 59.349 61.111 0.00 0.00 36.95 4.83
295 296 2.811317 GCAGTCGAAGAGGCACCG 60.811 66.667 0.00 0.00 37.86 4.94
296 297 2.811317 CGCAGTCGAAGAGGCACC 60.811 66.667 0.00 0.00 37.82 5.01
297 298 3.482783 GCGCAGTCGAAGAGGCAC 61.483 66.667 0.30 0.00 37.82 5.01
300 301 3.175240 CACGCGCAGTCGAAGAGG 61.175 66.667 5.73 0.00 36.95 3.69
301 302 3.175240 CCACGCGCAGTCGAAGAG 61.175 66.667 5.73 0.00 36.95 2.85
302 303 4.717629 CCCACGCGCAGTCGAAGA 62.718 66.667 5.73 0.00 38.10 2.87
326 327 5.562298 ACATAACACATATACTCACCCCC 57.438 43.478 0.00 0.00 0.00 5.40
327 328 7.058023 TGTACATAACACATATACTCACCCC 57.942 40.000 0.00 0.00 31.43 4.95
333 334 9.923143 ACGCAATATGTACATAACACATATACT 57.077 29.630 19.11 0.00 44.81 2.12
338 339 8.503196 CCAATACGCAATATGTACATAACACAT 58.497 33.333 19.11 8.26 42.09 3.21
339 340 7.041712 CCCAATACGCAATATGTACATAACACA 60.042 37.037 19.11 0.00 42.09 3.72
340 341 7.295201 CCCAATACGCAATATGTACATAACAC 58.705 38.462 19.11 10.22 42.09 3.32
341 342 6.072948 GCCCAATACGCAATATGTACATAACA 60.073 38.462 19.11 0.00 43.86 2.41
342 343 6.311723 GCCCAATACGCAATATGTACATAAC 58.688 40.000 19.11 10.86 0.00 1.89
343 344 5.413213 GGCCCAATACGCAATATGTACATAA 59.587 40.000 19.11 2.53 0.00 1.90
344 345 4.938832 GGCCCAATACGCAATATGTACATA 59.061 41.667 17.65 17.65 0.00 2.29
345 346 3.756434 GGCCCAATACGCAATATGTACAT 59.244 43.478 13.93 13.93 0.00 2.29
346 347 3.142951 GGCCCAATACGCAATATGTACA 58.857 45.455 0.00 0.00 0.00 2.90
347 348 2.486592 GGGCCCAATACGCAATATGTAC 59.513 50.000 19.95 0.00 0.00 2.90
348 349 2.785562 GGGCCCAATACGCAATATGTA 58.214 47.619 19.95 0.00 0.00 2.29
349 350 1.616159 GGGCCCAATACGCAATATGT 58.384 50.000 19.95 0.00 0.00 2.29
350 351 0.521291 CGGGCCCAATACGCAATATG 59.479 55.000 24.92 0.00 0.00 1.78
351 352 2.941210 CGGGCCCAATACGCAATAT 58.059 52.632 24.92 0.00 0.00 1.28
352 353 4.466133 CGGGCCCAATACGCAATA 57.534 55.556 24.92 0.00 0.00 1.90
357 358 4.929707 GGAGGCGGGCCCAATACG 62.930 72.222 24.92 8.49 36.58 3.06
358 359 1.702022 TTAGGAGGCGGGCCCAATAC 61.702 60.000 24.92 7.37 36.58 1.89
359 360 0.770557 ATTAGGAGGCGGGCCCAATA 60.771 55.000 24.92 1.29 36.58 1.90
360 361 1.655114 AATTAGGAGGCGGGCCCAAT 61.655 55.000 24.92 9.18 36.58 3.16
361 362 1.869824 AAATTAGGAGGCGGGCCCAA 61.870 55.000 24.92 6.77 36.58 4.12
362 363 2.279037 GAAATTAGGAGGCGGGCCCA 62.279 60.000 24.92 0.00 36.58 5.36
363 364 1.528542 GAAATTAGGAGGCGGGCCC 60.529 63.158 13.57 13.57 36.58 5.80
364 365 0.106669 AAGAAATTAGGAGGCGGGCC 60.107 55.000 0.18 0.18 0.00 5.80
365 366 1.025041 CAAGAAATTAGGAGGCGGGC 58.975 55.000 0.00 0.00 0.00 6.13
366 367 2.420058 ACAAGAAATTAGGAGGCGGG 57.580 50.000 0.00 0.00 0.00 6.13
367 368 5.855045 ACTATACAAGAAATTAGGAGGCGG 58.145 41.667 0.00 0.00 0.00 6.13
368 369 6.984474 TCAACTATACAAGAAATTAGGAGGCG 59.016 38.462 0.00 0.00 0.00 5.52
369 370 8.204836 TCTCAACTATACAAGAAATTAGGAGGC 58.795 37.037 0.00 0.00 0.00 4.70
373 374 9.197694 CGGATCTCAACTATACAAGAAATTAGG 57.802 37.037 0.00 0.00 0.00 2.69
374 375 9.751542 ACGGATCTCAACTATACAAGAAATTAG 57.248 33.333 0.00 0.00 0.00 1.73
375 376 9.529325 CACGGATCTCAACTATACAAGAAATTA 57.471 33.333 0.00 0.00 0.00 1.40
376 377 7.495934 CCACGGATCTCAACTATACAAGAAATT 59.504 37.037 0.00 0.00 0.00 1.82
377 378 6.986817 CCACGGATCTCAACTATACAAGAAAT 59.013 38.462 0.00 0.00 0.00 2.17
378 379 6.338146 CCACGGATCTCAACTATACAAGAAA 58.662 40.000 0.00 0.00 0.00 2.52
379 380 5.681437 GCCACGGATCTCAACTATACAAGAA 60.681 44.000 0.00 0.00 0.00 2.52
380 381 4.202121 GCCACGGATCTCAACTATACAAGA 60.202 45.833 0.00 0.00 0.00 3.02
381 382 4.051922 GCCACGGATCTCAACTATACAAG 58.948 47.826 0.00 0.00 0.00 3.16
382 383 3.181469 GGCCACGGATCTCAACTATACAA 60.181 47.826 0.00 0.00 0.00 2.41
383 384 2.364324 GGCCACGGATCTCAACTATACA 59.636 50.000 0.00 0.00 0.00 2.29
384 385 2.288886 GGGCCACGGATCTCAACTATAC 60.289 54.545 4.39 0.00 0.00 1.47
385 386 1.968493 GGGCCACGGATCTCAACTATA 59.032 52.381 4.39 0.00 0.00 1.31
386 387 0.759346 GGGCCACGGATCTCAACTAT 59.241 55.000 4.39 0.00 0.00 2.12
387 388 0.616395 TGGGCCACGGATCTCAACTA 60.616 55.000 0.00 0.00 0.00 2.24
388 389 1.274703 ATGGGCCACGGATCTCAACT 61.275 55.000 9.28 0.00 0.00 3.16
389 390 0.815615 GATGGGCCACGGATCTCAAC 60.816 60.000 9.28 0.00 0.00 3.18
390 391 0.982852 AGATGGGCCACGGATCTCAA 60.983 55.000 9.28 0.00 0.00 3.02
391 392 0.982852 AAGATGGGCCACGGATCTCA 60.983 55.000 9.28 0.00 0.00 3.27
392 393 0.181350 AAAGATGGGCCACGGATCTC 59.819 55.000 9.28 0.15 0.00 2.75
393 394 0.107017 CAAAGATGGGCCACGGATCT 60.107 55.000 9.28 4.60 0.00 2.75
394 395 0.394352 ACAAAGATGGGCCACGGATC 60.394 55.000 9.28 1.55 0.00 3.36
395 396 0.916086 TACAAAGATGGGCCACGGAT 59.084 50.000 9.28 0.00 0.00 4.18
396 397 0.035820 GTACAAAGATGGGCCACGGA 60.036 55.000 9.28 0.00 0.00 4.69
397 398 0.322098 TGTACAAAGATGGGCCACGG 60.322 55.000 9.28 0.00 0.00 4.94
398 399 1.670811 GATGTACAAAGATGGGCCACG 59.329 52.381 9.28 0.00 0.00 4.94
399 400 2.722094 TGATGTACAAAGATGGGCCAC 58.278 47.619 9.28 2.67 0.00 5.01
400 401 3.668141 ATGATGTACAAAGATGGGCCA 57.332 42.857 9.61 9.61 0.00 5.36
401 402 7.224753 CGTATATATGATGTACAAAGATGGGCC 59.775 40.741 0.00 0.00 0.00 5.80
402 403 7.764443 ACGTATATATGATGTACAAAGATGGGC 59.236 37.037 8.98 0.00 0.00 5.36
403 404 9.087424 CACGTATATATGATGTACAAAGATGGG 57.913 37.037 8.98 0.00 0.00 4.00
404 405 8.595533 GCACGTATATATGATGTACAAAGATGG 58.404 37.037 8.98 0.00 0.00 3.51
405 406 9.139174 TGCACGTATATATGATGTACAAAGATG 57.861 33.333 8.98 0.00 0.00 2.90
406 407 9.875691 ATGCACGTATATATGATGTACAAAGAT 57.124 29.630 8.98 0.00 0.00 2.40
410 411 9.030301 GCATATGCACGTATATATGATGTACAA 57.970 33.333 22.84 0.00 38.80 2.41
411 412 8.574196 GCATATGCACGTATATATGATGTACA 57.426 34.615 22.84 0.00 38.80 2.90
429 430 6.453003 CGATGTATTACTCTTCGTGCATATGC 60.453 42.308 21.09 21.09 42.50 3.14
430 431 6.582672 ACGATGTATTACTCTTCGTGCATATG 59.417 38.462 14.66 0.00 41.56 1.78
431 432 6.678878 ACGATGTATTACTCTTCGTGCATAT 58.321 36.000 14.66 0.00 41.56 1.78
432 433 6.068473 ACGATGTATTACTCTTCGTGCATA 57.932 37.500 14.66 0.00 41.56 3.14
433 434 4.933330 ACGATGTATTACTCTTCGTGCAT 58.067 39.130 14.66 0.00 41.56 3.96
434 435 4.365899 ACGATGTATTACTCTTCGTGCA 57.634 40.909 14.66 0.00 41.56 4.57
437 438 4.365899 TGCACGATGTATTACTCTTCGT 57.634 40.909 11.55 11.55 43.01 3.85
438 439 5.458779 TGATTGCACGATGTATTACTCTTCG 59.541 40.000 0.00 10.64 38.06 3.79
439 440 6.828502 TGATTGCACGATGTATTACTCTTC 57.171 37.500 0.00 0.00 0.00 2.87
440 441 7.926018 TGTATGATTGCACGATGTATTACTCTT 59.074 33.333 0.00 0.00 0.00 2.85
441 442 7.433680 TGTATGATTGCACGATGTATTACTCT 58.566 34.615 0.00 0.00 0.00 3.24
442 443 7.637709 TGTATGATTGCACGATGTATTACTC 57.362 36.000 0.00 0.00 0.00 2.59
443 444 7.710907 ACTTGTATGATTGCACGATGTATTACT 59.289 33.333 0.00 0.00 0.00 2.24
444 445 7.851508 ACTTGTATGATTGCACGATGTATTAC 58.148 34.615 0.00 0.00 0.00 1.89
445 446 9.191995 CTACTTGTATGATTGCACGATGTATTA 57.808 33.333 0.00 0.00 0.00 0.98
446 447 6.925610 ACTTGTATGATTGCACGATGTATT 57.074 33.333 0.00 0.00 0.00 1.89
447 448 6.146184 GCTACTTGTATGATTGCACGATGTAT 59.854 38.462 0.00 0.00 0.00 2.29
448 449 5.462068 GCTACTTGTATGATTGCACGATGTA 59.538 40.000 0.00 0.00 0.00 2.29
449 450 4.271049 GCTACTTGTATGATTGCACGATGT 59.729 41.667 0.00 0.00 0.00 3.06
450 451 4.270808 TGCTACTTGTATGATTGCACGATG 59.729 41.667 0.00 0.00 0.00 3.84
451 452 4.441792 TGCTACTTGTATGATTGCACGAT 58.558 39.130 0.00 0.00 0.00 3.73
452 453 3.855858 TGCTACTTGTATGATTGCACGA 58.144 40.909 0.00 0.00 0.00 4.35
453 454 4.598406 TTGCTACTTGTATGATTGCACG 57.402 40.909 0.00 0.00 0.00 5.34
475 476 1.000274 GCAGCCAACGTCATCCTTTTT 60.000 47.619 0.00 0.00 0.00 1.94
476 477 0.598065 GCAGCCAACGTCATCCTTTT 59.402 50.000 0.00 0.00 0.00 2.27
477 478 1.244019 GGCAGCCAACGTCATCCTTT 61.244 55.000 6.55 0.00 0.00 3.11
478 479 1.675641 GGCAGCCAACGTCATCCTT 60.676 57.895 6.55 0.00 0.00 3.36
479 480 2.045926 GGCAGCCAACGTCATCCT 60.046 61.111 6.55 0.00 0.00 3.24
480 481 3.134127 GGGCAGCCAACGTCATCC 61.134 66.667 15.19 0.00 0.00 3.51
481 482 3.499737 CGGGCAGCCAACGTCATC 61.500 66.667 15.19 0.00 0.00 2.92
482 483 4.329545 ACGGGCAGCCAACGTCAT 62.330 61.111 15.19 0.00 35.77 3.06
485 486 4.555709 TTGACGGGCAGCCAACGT 62.556 61.111 15.19 14.99 44.35 3.99
486 487 4.025401 GTTGACGGGCAGCCAACG 62.025 66.667 15.19 11.39 33.73 4.10
487 488 3.670377 GGTTGACGGGCAGCCAAC 61.670 66.667 15.19 8.85 46.26 3.77
491 492 1.302192 TTGTAGGTTGACGGGCAGC 60.302 57.895 0.00 0.00 0.00 5.25
492 493 1.289109 CGTTGTAGGTTGACGGGCAG 61.289 60.000 0.00 0.00 33.45 4.85
493 494 1.301087 CGTTGTAGGTTGACGGGCA 60.301 57.895 0.00 0.00 33.45 5.36
494 495 3.557824 CGTTGTAGGTTGACGGGC 58.442 61.111 0.00 0.00 33.45 6.13
497 498 2.377310 CCGCCGTTGTAGGTTGACG 61.377 63.158 0.00 0.00 36.61 4.35
498 499 0.038343 TACCGCCGTTGTAGGTTGAC 60.038 55.000 0.00 0.00 39.31 3.18
499 500 0.038343 GTACCGCCGTTGTAGGTTGA 60.038 55.000 0.00 0.00 39.31 3.18
500 501 1.346378 CGTACCGCCGTTGTAGGTTG 61.346 60.000 0.00 0.00 39.31 3.77
501 502 1.080569 CGTACCGCCGTTGTAGGTT 60.081 57.895 0.00 0.00 39.31 3.50
502 503 2.268076 ACGTACCGCCGTTGTAGGT 61.268 57.895 0.00 0.00 37.96 3.08
503 504 2.568090 ACGTACCGCCGTTGTAGG 59.432 61.111 0.00 0.00 37.96 3.18
509 510 1.469079 GGTTGTATAACGTACCGCCGT 60.469 52.381 0.00 0.00 44.23 5.68
510 511 1.199624 GGTTGTATAACGTACCGCCG 58.800 55.000 0.00 0.00 37.69 6.46
511 512 1.136891 AGGGTTGTATAACGTACCGCC 59.863 52.381 0.00 0.00 37.69 6.13
512 513 2.584492 AGGGTTGTATAACGTACCGC 57.416 50.000 0.00 0.00 37.69 5.68
513 514 3.380004 TGGTAGGGTTGTATAACGTACCG 59.620 47.826 19.15 0.00 43.40 4.02
514 515 4.441495 GGTGGTAGGGTTGTATAACGTACC 60.441 50.000 18.31 18.31 42.17 3.34
515 516 4.159506 TGGTGGTAGGGTTGTATAACGTAC 59.840 45.833 0.00 1.51 37.69 3.67
516 517 4.348486 TGGTGGTAGGGTTGTATAACGTA 58.652 43.478 0.00 0.00 37.69 3.57
517 518 3.172339 TGGTGGTAGGGTTGTATAACGT 58.828 45.455 0.00 0.00 37.69 3.99
518 519 3.891422 TGGTGGTAGGGTTGTATAACG 57.109 47.619 0.00 0.00 37.69 3.18
523 524 2.121478 AGGTTGGTGGTAGGGTTGTA 57.879 50.000 0.00 0.00 0.00 2.41
530 531 1.073923 AGCCAAGAAGGTTGGTGGTAG 59.926 52.381 5.70 0.00 41.53 3.18
543 544 1.321474 CCTCTTGCAAACAGCCAAGA 58.679 50.000 0.00 3.43 44.83 3.02
550 551 2.430465 GATCAGAGCCTCTTGCAAACA 58.570 47.619 0.00 0.00 44.83 2.83
553 554 1.065636 CAGGATCAGAGCCTCTTGCAA 60.066 52.381 3.48 0.00 44.83 4.08
554 555 0.540454 CAGGATCAGAGCCTCTTGCA 59.460 55.000 3.48 0.00 44.83 4.08
598 600 0.379669 GCAATGTTCAGCCGGATCTG 59.620 55.000 5.05 3.68 35.46 2.90
641 643 5.766174 ACAATAATATACGGGCCGAATTTGT 59.234 36.000 35.78 24.50 0.00 2.83
648 650 5.472148 TGTAAGACAATAATATACGGGCCG 58.528 41.667 27.06 27.06 0.00 6.13
708 2827 6.968263 ACATGTAGCTACTGTGAGACATAT 57.032 37.500 26.13 8.09 0.00 1.78
709 2828 6.775594 AACATGTAGCTACTGTGAGACATA 57.224 37.500 26.13 6.33 0.00 2.29
720 2844 8.454106 AGATTTTGTGATCAAACATGTAGCTAC 58.546 33.333 17.30 17.30 42.28 3.58
776 2900 5.616488 TTTCGGCAAAGTTCTATGTTACC 57.384 39.130 0.00 0.00 0.00 2.85
921 3061 2.033141 TCCTCTGCAGCTGTTGGC 59.967 61.111 16.64 0.34 42.19 4.52
1227 3371 0.313043 GAAGAATCGGGCATGGCATG 59.687 55.000 22.99 22.99 0.00 4.06
1467 3611 1.000171 CCACTGCCCTTGCTCTTTTTC 60.000 52.381 0.00 0.00 38.71 2.29
1573 3717 2.093021 TGCTAATGCTATGGTGACTGCA 60.093 45.455 0.00 0.00 40.48 4.41
1578 3722 2.842457 CTGCTGCTAATGCTATGGTGA 58.158 47.619 0.00 0.00 40.48 4.02
1626 3770 2.971598 GCTCTTGGGCAGTGGGCTA 61.972 63.158 0.00 0.00 44.01 3.93
1748 3892 0.107945 CCTGCTCCTGCTACTTCCAC 60.108 60.000 0.00 0.00 40.48 4.02
1749 3893 0.252239 TCCTGCTCCTGCTACTTCCA 60.252 55.000 0.00 0.00 40.48 3.53
1750 3894 0.463620 CTCCTGCTCCTGCTACTTCC 59.536 60.000 0.00 0.00 40.48 3.46
1751 3895 0.179086 GCTCCTGCTCCTGCTACTTC 60.179 60.000 0.00 0.00 40.48 3.01
1752 3896 0.906756 TGCTCCTGCTCCTGCTACTT 60.907 55.000 0.00 0.00 40.48 2.24
1753 3897 1.305633 TGCTCCTGCTCCTGCTACT 60.306 57.895 0.00 0.00 40.48 2.57
1756 3900 3.400928 CCTGCTCCTGCTCCTGCT 61.401 66.667 0.00 0.00 40.48 4.24
1761 3905 2.187424 CTGCTCCTGCTCCTGCTC 59.813 66.667 0.00 0.00 40.48 4.26
1765 3909 3.082701 GCTCCTGCTCCTGCTCCT 61.083 66.667 0.00 0.00 40.48 3.69
1831 3975 2.238646 CAACCCTGTCCCTACTTGCATA 59.761 50.000 0.00 0.00 0.00 3.14
1920 4064 4.373116 TCAGCAACCGCGTCCTCC 62.373 66.667 4.92 0.00 45.49 4.30
1996 4140 4.225267 AGGTAAGATCTCACCCGTTTCATT 59.775 41.667 11.80 0.00 35.25 2.57
2040 4184 2.238395 GAGCTCCAAATCCTCCTCAACT 59.762 50.000 0.87 0.00 0.00 3.16
2161 4305 1.981495 AGTATTCTGGGGGCTATCTGC 59.019 52.381 0.00 0.00 41.94 4.26
2280 4424 7.020827 AGGACTTCTACCATTCTCAAAATCA 57.979 36.000 0.00 0.00 0.00 2.57
2376 4520 3.741476 CCGCTTCCCTGCTGTTGC 61.741 66.667 0.00 0.00 40.20 4.17
2384 4528 1.285373 TCTCTTCTAGTCCGCTTCCCT 59.715 52.381 0.00 0.00 0.00 4.20
2406 4550 6.586463 GTGAAGTGATATGAGAAGTTGAACGA 59.414 38.462 0.00 0.00 0.00 3.85
2624 4768 2.373169 ACAGAGGCAGGATTCTCACAAA 59.627 45.455 0.00 0.00 32.76 2.83
2737 4881 4.322567 GACAAAACAGAGCTCTCAGGAAT 58.677 43.478 14.96 0.00 0.00 3.01
2793 4937 3.648067 ACTGAGAACCATCTTTGTCCTCA 59.352 43.478 0.00 0.00 35.54 3.86
2909 5054 7.503230 ACAATGCATATGATTGACCTTGTGATA 59.497 33.333 23.26 0.00 35.23 2.15
3122 5280 6.575254 GCAGGATCTCTAGAAGGAACAAAAGA 60.575 42.308 0.00 0.00 0.00 2.52
3140 5298 4.267928 GTGTTGTATTAGTCGTGCAGGATC 59.732 45.833 12.93 6.63 0.00 3.36
3158 5316 1.591594 ACGACGTGAGCAGGTGTTG 60.592 57.895 0.00 0.00 0.00 3.33
3161 5319 2.016704 GTCACGACGTGAGCAGGTG 61.017 63.158 29.86 0.89 43.57 4.00
3383 5542 3.210232 CTGCATCACAGGATCCAAGAT 57.790 47.619 15.82 10.91 43.19 2.40
3445 5604 0.590195 GCTCCTTGCAATATCCTGCG 59.410 55.000 0.00 0.00 45.74 5.18
3529 5688 3.264193 ACTGCACATAGATCTCCAAACCA 59.736 43.478 0.00 0.00 0.00 3.67
3595 5762 7.446001 TTCATGATGCAAACATACAACTACA 57.554 32.000 0.00 0.00 36.35 2.74
3619 5786 8.606830 GGTCAAGATAGGAACCCATCTATTTAT 58.393 37.037 2.57 0.00 31.25 1.40
3705 5882 0.612174 TGGAGGTTCTCTCACCCTCG 60.612 60.000 0.00 0.00 44.71 4.63
3895 6073 1.940613 GCCTTGCCTAATCTGTTACCG 59.059 52.381 0.00 0.00 0.00 4.02


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.