Multiple sequence alignment - TraesCS2B01G280900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G280900 chr2B 100.000 2366 0 0 1 2366 387201353 387203718 0.000000e+00 4370.0
1 TraesCS2B01G280900 chr2B 78.607 402 66 10 1971 2356 756307133 756307530 5.050000e-62 248.0
2 TraesCS2B01G280900 chr2B 78.109 402 68 10 1971 2356 756321989 756322386 1.090000e-58 237.0
3 TraesCS2B01G280900 chr2B 82.576 132 16 5 1 132 518747698 518747822 2.490000e-20 110.0
4 TraesCS2B01G280900 chr2B 79.528 127 25 1 2187 2313 707619413 707619288 3.240000e-14 89.8
5 TraesCS2B01G280900 chr2B 85.507 69 10 0 342 410 17891769 17891837 3.260000e-09 73.1
6 TraesCS2B01G280900 chr2D 91.522 1038 55 16 651 1660 318818462 318819494 0.000000e+00 1399.0
7 TraesCS2B01G280900 chr2D 90.882 669 43 9 1 653 318817622 318818288 0.000000e+00 881.0
8 TraesCS2B01G280900 chr2D 81.818 132 17 5 1 132 440775066 440775190 1.160000e-18 104.0
9 TraesCS2B01G280900 chr2A 88.587 920 64 20 768 1660 412034301 412033396 0.000000e+00 1079.0
10 TraesCS2B01G280900 chr2A 87.214 524 42 12 145 654 412045558 412045046 7.340000e-160 573.0
11 TraesCS2B01G280900 chr2A 94.737 171 6 1 1658 1825 412033350 412033180 1.800000e-66 263.0
12 TraesCS2B01G280900 chr2A 96.774 124 4 0 1 124 412045675 412045552 8.570000e-50 207.0
13 TraesCS2B01G280900 chr2A 78.912 294 54 7 1 292 690726699 690726986 2.400000e-45 193.0
14 TraesCS2B01G280900 chr2A 96.364 110 3 1 667 776 412038405 412038297 1.870000e-41 180.0
15 TraesCS2B01G280900 chr1B 80.058 346 63 3 1971 2311 87966161 87966505 3.900000e-63 252.0
16 TraesCS2B01G280900 chr5B 81.518 303 52 4 2013 2313 529663523 529663223 1.820000e-61 246.0
17 TraesCS2B01G280900 chr4D 81.570 293 46 7 1 291 16671680 16671966 3.930000e-58 235.0
18 TraesCS2B01G280900 chr4D 83.607 122 15 4 1 121 16671551 16671668 2.490000e-20 110.0
19 TraesCS2B01G280900 chr3B 81.017 295 50 6 1 293 671380588 671380298 1.830000e-56 230.0
20 TraesCS2B01G280900 chr6A 76.253 379 70 14 1987 2358 584693535 584693900 1.440000e-42 183.0
21 TraesCS2B01G280900 chr5A 79.375 160 28 5 5 163 688524676 688524521 8.940000e-20 108.0
22 TraesCS2B01G280900 chr5A 96.774 31 1 0 237 267 326044603 326044633 4.000000e-03 52.8
23 TraesCS2B01G280900 chr7D 95.000 40 1 1 2320 2359 636340053 636340015 7.060000e-06 62.1
24 TraesCS2B01G280900 chr5D 91.111 45 1 3 2320 2363 463039017 463038975 9.130000e-05 58.4
25 TraesCS2B01G280900 chr1D 89.362 47 3 2 2314 2359 480367877 480367922 9.130000e-05 58.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G280900 chr2B 387201353 387203718 2365 False 4370.000000 4370 100.000000 1 2366 1 chr2B.!!$F2 2365
1 TraesCS2B01G280900 chr2D 318817622 318819494 1872 False 1140.000000 1399 91.202000 1 1660 2 chr2D.!!$F2 1659
2 TraesCS2B01G280900 chr2A 412033180 412038405 5225 True 507.333333 1079 93.229333 667 1825 3 chr2A.!!$R1 1158
3 TraesCS2B01G280900 chr2A 412045046 412045675 629 True 390.000000 573 91.994000 1 654 2 chr2A.!!$R2 653

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
874 5076 0.250295 TGGAGAACAAGCTTGACCGG 60.25 55.0 32.5 6.3 0.0 5.28 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2172 6460 0.029567 CCAGCTAGTTCGCTCCTACG 59.97 60.0 0.0 0.0 38.41 3.51 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
30 31 5.422331 TCAAACACACAAAAGGGTCCAAATA 59.578 36.000 0.00 0.00 0.00 1.40
46 47 9.797556 GGGTCCAAATAAAGTAAATAACATGAC 57.202 33.333 0.00 0.00 0.00 3.06
125 126 4.610333 TCTTGGAGGTGAGTATGAGCTTA 58.390 43.478 0.00 0.00 23.04 3.09
128 129 3.570125 TGGAGGTGAGTATGAGCTTATCG 59.430 47.826 0.00 0.00 23.04 2.92
147 148 2.346244 TCGGTTTTCGATACGTTGATGC 59.654 45.455 0.00 0.00 43.74 3.91
153 154 1.276844 GATACGTTGATGCGCTGCC 59.723 57.895 9.73 0.00 34.88 4.85
160 161 0.452987 TTGATGCGCTGCCAGAAATC 59.547 50.000 9.73 0.44 0.00 2.17
164 165 0.606130 TGCGCTGCCAGAAATCTTCA 60.606 50.000 9.73 0.00 0.00 3.02
171 172 5.555017 GCTGCCAGAAATCTTCATATCCTA 58.445 41.667 0.00 0.00 0.00 2.94
181 187 8.450578 AAATCTTCATATCCTATTTTGCGTCA 57.549 30.769 0.00 0.00 0.00 4.35
200 206 3.476552 TCATGTTCCAACTCAACAGGAC 58.523 45.455 0.00 0.00 39.09 3.85
236 242 9.427821 AGATATACCTAAAGTTCTCTGTCATGT 57.572 33.333 0.00 0.00 0.00 3.21
253 259 6.131961 TGTCATGTCTCTCTCATCTTCCATA 58.868 40.000 0.00 0.00 0.00 2.74
328 336 5.572211 ACGATCATGAAAATGGTCATTTCG 58.428 37.500 0.00 2.26 41.91 3.46
359 367 2.239681 TGTCTTCTTCCTCCTCCTCC 57.760 55.000 0.00 0.00 0.00 4.30
370 378 0.907486 TCCTCCTCCGACGAAGAGTA 59.093 55.000 0.00 0.00 0.00 2.59
373 381 2.688958 CCTCCTCCGACGAAGAGTAATT 59.311 50.000 0.00 0.00 0.00 1.40
393 401 2.317040 TGAAGAACGTCTCCCTCAACT 58.683 47.619 0.00 0.00 0.00 3.16
404 412 4.216472 GTCTCCCTCAACTTTTTCATCCAC 59.784 45.833 0.00 0.00 0.00 4.02
420 428 4.931601 TCATCCACGCTATGCAATATTCTC 59.068 41.667 0.00 0.00 0.00 2.87
504 517 3.959975 GCGAACACTTTGCGGGCA 61.960 61.111 0.00 0.00 0.00 5.36
587 606 2.435938 TTCGGCATGGGACTTCGC 60.436 61.111 0.00 0.00 0.00 4.70
589 608 2.739849 TTCGGCATGGGACTTCGCAA 62.740 55.000 0.00 0.00 42.15 4.85
647 668 1.593209 AAGCTCGTCGCGACCAAAA 60.593 52.632 31.84 14.77 45.59 2.44
652 849 0.876777 TCGTCGCGACCAAAATGTGT 60.877 50.000 31.84 0.00 0.00 3.72
714 912 1.128507 TGCTTACGTACGTACTCGGTG 59.871 52.381 26.83 13.52 41.85 4.94
806 5008 1.883084 CGCCTTGGAGACGGTATGC 60.883 63.158 0.00 0.00 0.00 3.14
844 5046 1.534175 GGTCGTGTCTGATGGATCGAC 60.534 57.143 0.00 0.00 44.56 4.20
851 5053 4.093556 GTGTCTGATGGATCGACCTTTTTC 59.906 45.833 0.00 0.00 39.86 2.29
874 5076 0.250295 TGGAGAACAAGCTTGACCGG 60.250 55.000 32.50 6.30 0.00 5.28
902 5106 2.348666 GGCAGGCATATATAAAGACGCG 59.651 50.000 3.53 3.53 0.00 6.01
921 5125 2.985847 GCAGCACGGCCTTCCTTT 60.986 61.111 0.00 0.00 0.00 3.11
986 5190 0.601841 GCTTCGTTCGAGAAACCCCA 60.602 55.000 0.00 0.00 34.11 4.96
1107 5311 1.051812 CAGCCGGGATCTGGTATCTT 58.948 55.000 2.18 0.00 0.00 2.40
1251 5455 1.477553 GTGTATGGACAGTACCCGGA 58.522 55.000 0.73 0.00 35.82 5.14
1278 5482 1.689575 GGTGCAGAGGAGGAGGTCATA 60.690 57.143 0.00 0.00 0.00 2.15
1362 5566 4.373116 GCGGCCACGAAGGAGACA 62.373 66.667 2.24 0.00 44.60 3.41
1363 5567 2.579201 CGGCCACGAAGGAGACAT 59.421 61.111 2.24 0.00 44.60 3.06
1364 5568 1.813859 CGGCCACGAAGGAGACATA 59.186 57.895 2.24 0.00 44.60 2.29
1365 5569 0.249073 CGGCCACGAAGGAGACATAG 60.249 60.000 2.24 0.00 44.60 2.23
1366 5570 1.112113 GGCCACGAAGGAGACATAGA 58.888 55.000 0.00 0.00 41.22 1.98
1367 5571 1.689273 GGCCACGAAGGAGACATAGAT 59.311 52.381 0.00 0.00 41.22 1.98
1368 5572 2.103263 GGCCACGAAGGAGACATAGATT 59.897 50.000 0.00 0.00 41.22 2.40
1405 5615 7.865706 TTAATGAAAAAGGAGATAGCAGGTC 57.134 36.000 0.00 0.00 0.00 3.85
1406 5616 4.222124 TGAAAAAGGAGATAGCAGGTCC 57.778 45.455 0.00 0.00 0.00 4.46
1411 5621 4.936685 AAGGAGATAGCAGGTCCTTTTT 57.063 40.909 4.34 0.00 46.57 1.94
1415 5625 4.445019 GGAGATAGCAGGTCCTTTTTAGGG 60.445 50.000 0.00 0.00 0.00 3.53
1416 5626 4.371681 AGATAGCAGGTCCTTTTTAGGGA 58.628 43.478 0.00 0.00 0.00 4.20
1417 5627 4.410555 AGATAGCAGGTCCTTTTTAGGGAG 59.589 45.833 0.00 0.00 33.04 4.30
1422 5639 4.324641 GCAGGTCCTTTTTAGGGAGAGAAT 60.325 45.833 0.00 0.00 33.04 2.40
1460 5679 7.116519 GCGGTTGTGCCAAATTAGTTAATTTAA 59.883 33.333 8.97 0.00 42.26 1.52
1495 5714 8.527567 ACAAACGTTTAATTATGGTTTGATGG 57.472 30.769 26.42 12.38 46.25 3.51
1496 5715 7.117092 ACAAACGTTTAATTATGGTTTGATGGC 59.883 33.333 26.42 0.00 46.25 4.40
1500 5719 7.032580 CGTTTAATTATGGTTTGATGGCAGAA 58.967 34.615 0.00 0.00 0.00 3.02
1519 5738 5.406477 GCAGAAAAATCTTTGTGAATGGGAC 59.594 40.000 0.00 0.00 37.89 4.46
1608 5845 9.940166 GCAAAAAGAACAATGATTTCTGAAAAT 57.060 25.926 6.95 0.00 37.80 1.82
1679 5964 2.044946 GCTCTGTTCCCCGCCATT 60.045 61.111 0.00 0.00 0.00 3.16
1735 6020 2.560981 ACAAAGTCGGCCCTTTTAATGG 59.439 45.455 4.40 0.00 32.42 3.16
1736 6021 2.560981 CAAAGTCGGCCCTTTTAATGGT 59.439 45.455 4.40 0.00 32.42 3.55
1768 6053 1.879380 GTGCACTTCATAGTTGGCACA 59.121 47.619 10.32 0.00 46.03 4.57
1813 6101 5.515270 CAGACGCACGTCAGATCTTAATTAA 59.485 40.000 23.59 0.00 46.76 1.40
1822 6110 6.144724 CGTCAGATCTTAATTAAGGCAGTAGC 59.855 42.308 22.11 7.93 41.10 3.58
1825 6113 7.069950 TCAGATCTTAATTAAGGCAGTAGCAGA 59.930 37.037 22.11 7.51 44.61 4.26
1826 6114 7.384660 CAGATCTTAATTAAGGCAGTAGCAGAG 59.615 40.741 22.11 0.00 44.61 3.35
1827 6115 5.918608 TCTTAATTAAGGCAGTAGCAGAGG 58.081 41.667 22.11 0.00 44.61 3.69
1828 6116 2.629336 ATTAAGGCAGTAGCAGAGGC 57.371 50.000 0.00 0.00 44.61 4.70
1829 6117 1.275666 TTAAGGCAGTAGCAGAGGCA 58.724 50.000 0.00 0.00 44.61 4.75
1830 6118 0.537188 TAAGGCAGTAGCAGAGGCAC 59.463 55.000 0.00 0.00 44.61 5.01
1831 6119 2.510238 GGCAGTAGCAGAGGCACG 60.510 66.667 0.00 0.00 44.61 5.34
1832 6120 2.573869 GCAGTAGCAGAGGCACGA 59.426 61.111 0.00 0.00 44.61 4.35
1833 6121 1.079819 GCAGTAGCAGAGGCACGAA 60.080 57.895 0.00 0.00 44.61 3.85
1834 6122 1.355066 GCAGTAGCAGAGGCACGAAC 61.355 60.000 0.00 0.00 44.61 3.95
1835 6123 0.244994 CAGTAGCAGAGGCACGAACT 59.755 55.000 0.00 0.00 44.61 3.01
1836 6124 0.244994 AGTAGCAGAGGCACGAACTG 59.755 55.000 0.00 0.00 44.61 3.16
1837 6125 0.737715 GTAGCAGAGGCACGAACTGG 60.738 60.000 0.00 0.00 44.61 4.00
1838 6126 1.888436 TAGCAGAGGCACGAACTGGG 61.888 60.000 0.00 0.00 44.61 4.45
1839 6127 2.743718 CAGAGGCACGAACTGGGT 59.256 61.111 0.00 0.00 0.00 4.51
1840 6128 1.071471 CAGAGGCACGAACTGGGTT 59.929 57.895 0.00 0.00 0.00 4.11
1841 6129 0.951040 CAGAGGCACGAACTGGGTTC 60.951 60.000 0.00 0.82 38.97 3.62
1842 6130 1.122019 AGAGGCACGAACTGGGTTCT 61.122 55.000 8.46 0.00 40.05 3.01
1843 6131 0.250338 GAGGCACGAACTGGGTTCTT 60.250 55.000 8.46 0.00 40.05 2.52
1844 6132 0.250338 AGGCACGAACTGGGTTCTTC 60.250 55.000 8.46 0.00 40.05 2.87
1845 6133 1.235281 GGCACGAACTGGGTTCTTCC 61.235 60.000 8.46 3.76 40.05 3.46
1846 6134 1.566018 GCACGAACTGGGTTCTTCCG 61.566 60.000 8.46 0.00 40.05 4.30
1847 6135 1.301479 ACGAACTGGGTTCTTCCGC 60.301 57.895 8.46 0.00 40.05 5.54
1848 6136 1.301401 CGAACTGGGTTCTTCCGCA 60.301 57.895 8.46 0.00 40.05 5.69
1849 6137 1.291877 CGAACTGGGTTCTTCCGCAG 61.292 60.000 8.46 3.99 40.05 5.18
1850 6138 1.578206 GAACTGGGTTCTTCCGCAGC 61.578 60.000 5.30 0.00 39.23 5.25
1851 6139 2.747855 CTGGGTTCTTCCGCAGCC 60.748 66.667 0.00 0.00 37.00 4.85
1852 6140 3.249189 TGGGTTCTTCCGCAGCCT 61.249 61.111 0.00 0.00 37.00 4.58
1853 6141 2.436824 GGGTTCTTCCGCAGCCTC 60.437 66.667 0.00 0.00 37.00 4.70
1854 6142 2.665603 GGTTCTTCCGCAGCCTCT 59.334 61.111 0.00 0.00 0.00 3.69
1855 6143 1.448717 GGTTCTTCCGCAGCCTCTC 60.449 63.158 0.00 0.00 0.00 3.20
1856 6144 1.594310 GTTCTTCCGCAGCCTCTCT 59.406 57.895 0.00 0.00 0.00 3.10
1857 6145 0.459411 GTTCTTCCGCAGCCTCTCTC 60.459 60.000 0.00 0.00 0.00 3.20
1858 6146 1.608717 TTCTTCCGCAGCCTCTCTCC 61.609 60.000 0.00 0.00 0.00 3.71
1859 6147 3.423162 CTTCCGCAGCCTCTCTCCG 62.423 68.421 0.00 0.00 0.00 4.63
1863 6151 4.567385 GCAGCCTCTCTCCGCGAG 62.567 72.222 8.23 3.02 41.30 5.03
1864 6152 4.567385 CAGCCTCTCTCCGCGAGC 62.567 72.222 8.23 0.00 39.70 5.03
1865 6153 4.813235 AGCCTCTCTCCGCGAGCT 62.813 66.667 8.23 0.49 39.70 4.09
1866 6154 4.567385 GCCTCTCTCCGCGAGCTG 62.567 72.222 8.23 0.00 39.70 4.24
1867 6155 4.567385 CCTCTCTCCGCGAGCTGC 62.567 72.222 8.23 0.00 39.70 5.25
1868 6156 4.567385 CTCTCTCCGCGAGCTGCC 62.567 72.222 8.23 0.00 42.08 4.85
1877 6165 4.849329 CGAGCTGCCGTCCGTACC 62.849 72.222 0.00 0.00 0.00 3.34
1878 6166 3.755628 GAGCTGCCGTCCGTACCA 61.756 66.667 0.00 0.00 0.00 3.25
1879 6167 3.984200 GAGCTGCCGTCCGTACCAC 62.984 68.421 0.00 0.00 0.00 4.16
1880 6168 4.065281 GCTGCCGTCCGTACCACT 62.065 66.667 0.00 0.00 0.00 4.00
1881 6169 2.181021 CTGCCGTCCGTACCACTC 59.819 66.667 0.00 0.00 0.00 3.51
1882 6170 3.678717 CTGCCGTCCGTACCACTCG 62.679 68.421 0.00 0.00 0.00 4.18
1883 6171 3.741476 GCCGTCCGTACCACTCGT 61.741 66.667 0.00 0.00 0.00 4.18
1884 6172 2.482374 CCGTCCGTACCACTCGTC 59.518 66.667 0.00 0.00 0.00 4.20
1885 6173 2.037136 CCGTCCGTACCACTCGTCT 61.037 63.158 0.00 0.00 0.00 4.18
1886 6174 1.423056 CGTCCGTACCACTCGTCTC 59.577 63.158 0.00 0.00 0.00 3.36
1887 6175 1.799383 GTCCGTACCACTCGTCTCC 59.201 63.158 0.00 0.00 0.00 3.71
1888 6176 0.957395 GTCCGTACCACTCGTCTCCA 60.957 60.000 0.00 0.00 0.00 3.86
1889 6177 0.675837 TCCGTACCACTCGTCTCCAG 60.676 60.000 0.00 0.00 0.00 3.86
1890 6178 0.959372 CCGTACCACTCGTCTCCAGT 60.959 60.000 0.00 0.00 0.00 4.00
1891 6179 0.447011 CGTACCACTCGTCTCCAGTC 59.553 60.000 0.00 0.00 0.00 3.51
1892 6180 0.447011 GTACCACTCGTCTCCAGTCG 59.553 60.000 0.00 0.00 0.00 4.18
1893 6181 0.035881 TACCACTCGTCTCCAGTCGT 59.964 55.000 0.00 0.00 0.00 4.34
1894 6182 1.235948 ACCACTCGTCTCCAGTCGTC 61.236 60.000 0.00 0.00 0.00 4.20
1895 6183 1.132844 CACTCGTCTCCAGTCGTCG 59.867 63.158 0.00 0.00 0.00 5.12
1896 6184 1.005275 ACTCGTCTCCAGTCGTCGA 60.005 57.895 0.00 0.00 0.00 4.20
1897 6185 0.391395 ACTCGTCTCCAGTCGTCGAT 60.391 55.000 0.00 0.00 0.00 3.59
1898 6186 1.134877 ACTCGTCTCCAGTCGTCGATA 60.135 52.381 0.00 0.00 0.00 2.92
1899 6187 2.136728 CTCGTCTCCAGTCGTCGATAT 58.863 52.381 0.00 0.00 0.00 1.63
1900 6188 2.133553 TCGTCTCCAGTCGTCGATATC 58.866 52.381 0.00 0.00 0.00 1.63
1901 6189 2.136728 CGTCTCCAGTCGTCGATATCT 58.863 52.381 0.00 0.00 0.00 1.98
1902 6190 2.156117 CGTCTCCAGTCGTCGATATCTC 59.844 54.545 0.00 0.00 0.00 2.75
1903 6191 2.481185 GTCTCCAGTCGTCGATATCTCC 59.519 54.545 0.00 0.00 0.00 3.71
1904 6192 1.807742 CTCCAGTCGTCGATATCTCCC 59.192 57.143 0.00 0.00 0.00 4.30
1905 6193 1.420514 TCCAGTCGTCGATATCTCCCT 59.579 52.381 0.00 0.00 0.00 4.20
1906 6194 1.537638 CCAGTCGTCGATATCTCCCTG 59.462 57.143 0.00 0.00 0.00 4.45
1907 6195 1.068885 CAGTCGTCGATATCTCCCTGC 60.069 57.143 0.00 0.00 0.00 4.85
1908 6196 1.202830 AGTCGTCGATATCTCCCTGCT 60.203 52.381 0.00 0.00 0.00 4.24
1909 6197 1.609555 GTCGTCGATATCTCCCTGCTT 59.390 52.381 0.00 0.00 0.00 3.91
1910 6198 1.880675 TCGTCGATATCTCCCTGCTTC 59.119 52.381 0.34 0.00 0.00 3.86
1911 6199 1.609072 CGTCGATATCTCCCTGCTTCA 59.391 52.381 0.34 0.00 0.00 3.02
1912 6200 2.034685 CGTCGATATCTCCCTGCTTCAA 59.965 50.000 0.34 0.00 0.00 2.69
1913 6201 3.385577 GTCGATATCTCCCTGCTTCAAC 58.614 50.000 0.34 0.00 0.00 3.18
1914 6202 3.031013 TCGATATCTCCCTGCTTCAACA 58.969 45.455 0.34 0.00 0.00 3.33
1915 6203 3.450817 TCGATATCTCCCTGCTTCAACAA 59.549 43.478 0.34 0.00 0.00 2.83
1916 6204 4.081142 TCGATATCTCCCTGCTTCAACAAA 60.081 41.667 0.34 0.00 0.00 2.83
1917 6205 4.635765 CGATATCTCCCTGCTTCAACAAAA 59.364 41.667 0.34 0.00 0.00 2.44
1918 6206 5.297776 CGATATCTCCCTGCTTCAACAAAAT 59.702 40.000 0.34 0.00 0.00 1.82
1919 6207 6.183360 CGATATCTCCCTGCTTCAACAAAATT 60.183 38.462 0.34 0.00 0.00 1.82
1920 6208 4.853924 TCTCCCTGCTTCAACAAAATTC 57.146 40.909 0.00 0.00 0.00 2.17
1921 6209 4.473444 TCTCCCTGCTTCAACAAAATTCT 58.527 39.130 0.00 0.00 0.00 2.40
1922 6210 4.279169 TCTCCCTGCTTCAACAAAATTCTG 59.721 41.667 0.00 0.00 0.00 3.02
1923 6211 3.062042 CCCTGCTTCAACAAAATTCTGC 58.938 45.455 0.00 0.00 0.00 4.26
1924 6212 3.493002 CCCTGCTTCAACAAAATTCTGCA 60.493 43.478 0.00 0.00 0.00 4.41
1925 6213 3.739300 CCTGCTTCAACAAAATTCTGCAG 59.261 43.478 7.63 7.63 44.09 4.41
1926 6214 3.125316 TGCTTCAACAAAATTCTGCAGC 58.875 40.909 9.47 0.00 0.00 5.25
1927 6215 2.154389 GCTTCAACAAAATTCTGCAGCG 59.846 45.455 9.47 0.00 0.00 5.18
1928 6216 1.769733 TCAACAAAATTCTGCAGCGC 58.230 45.000 9.47 0.00 0.00 5.92
1929 6217 0.431984 CAACAAAATTCTGCAGCGCG 59.568 50.000 9.47 0.00 0.00 6.86
1930 6218 0.030638 AACAAAATTCTGCAGCGCGT 59.969 45.000 9.47 0.00 0.00 6.01
1931 6219 0.661187 ACAAAATTCTGCAGCGCGTG 60.661 50.000 9.47 6.12 0.00 5.34
1940 6228 2.887568 CAGCGCGTGCCTAGGAAG 60.888 66.667 19.02 3.38 44.31 3.46
1941 6229 3.068691 AGCGCGTGCCTAGGAAGA 61.069 61.111 19.02 0.00 44.31 2.87
1942 6230 2.583593 GCGCGTGCCTAGGAAGAG 60.584 66.667 14.75 5.45 33.98 2.85
1943 6231 2.105128 CGCGTGCCTAGGAAGAGG 59.895 66.667 14.75 2.04 39.88 3.69
1944 6232 2.415608 CGCGTGCCTAGGAAGAGGA 61.416 63.158 14.75 0.00 39.15 3.71
1945 6233 1.898154 GCGTGCCTAGGAAGAGGAA 59.102 57.895 14.75 0.00 39.15 3.36
1946 6234 0.460459 GCGTGCCTAGGAAGAGGAAC 60.460 60.000 14.75 0.00 41.38 3.62
1947 6235 3.742983 GTGCCTAGGAAGAGGAACG 57.257 57.895 14.75 0.00 35.33 3.95
1948 6236 0.175989 GTGCCTAGGAAGAGGAACGG 59.824 60.000 14.75 0.00 35.33 4.44
1949 6237 0.976073 TGCCTAGGAAGAGGAACGGG 60.976 60.000 14.75 0.00 39.15 5.28
1950 6238 0.686769 GCCTAGGAAGAGGAACGGGA 60.687 60.000 14.75 0.00 39.15 5.14
1951 6239 2.035331 GCCTAGGAAGAGGAACGGGAT 61.035 57.143 14.75 0.00 39.15 3.85
1952 6240 1.689273 CCTAGGAAGAGGAACGGGATG 59.311 57.143 1.05 0.00 39.15 3.51
1953 6241 1.069358 CTAGGAAGAGGAACGGGATGC 59.931 57.143 0.00 0.00 0.00 3.91
1954 6242 0.618968 AGGAAGAGGAACGGGATGCT 60.619 55.000 0.00 0.00 0.00 3.79
1955 6243 0.462759 GGAAGAGGAACGGGATGCTG 60.463 60.000 0.00 0.00 0.00 4.41
1956 6244 1.078143 AAGAGGAACGGGATGCTGC 60.078 57.895 0.00 0.00 0.00 5.25
1957 6245 2.859273 AAGAGGAACGGGATGCTGCG 62.859 60.000 0.00 0.00 0.00 5.18
1958 6246 4.473520 AGGAACGGGATGCTGCGG 62.474 66.667 0.00 0.00 0.00 5.69
1966 6254 4.819761 GATGCTGCGGCTCCGTGA 62.820 66.667 20.27 0.00 42.09 4.35
1988 6276 2.263540 GGCGACGGGTGCTTTCTA 59.736 61.111 0.00 0.00 0.00 2.10
1989 6277 1.810030 GGCGACGGGTGCTTTCTAG 60.810 63.158 0.00 0.00 0.00 2.43
2000 6288 2.524569 GCTTTCTAGCTAGCTCCTGG 57.475 55.000 23.26 10.31 44.27 4.45
2001 6289 2.035632 GCTTTCTAGCTAGCTCCTGGA 58.964 52.381 23.26 12.51 44.27 3.86
2002 6290 2.632512 GCTTTCTAGCTAGCTCCTGGAT 59.367 50.000 23.26 0.00 44.27 3.41
2003 6291 3.306019 GCTTTCTAGCTAGCTCCTGGATC 60.306 52.174 23.26 2.75 44.27 3.36
2004 6292 2.192664 TCTAGCTAGCTCCTGGATCG 57.807 55.000 23.26 1.02 0.00 3.69
2005 6293 1.700186 TCTAGCTAGCTCCTGGATCGA 59.300 52.381 23.26 0.00 0.00 3.59
2006 6294 2.307392 TCTAGCTAGCTCCTGGATCGAT 59.693 50.000 23.26 0.00 0.00 3.59
2007 6295 1.544724 AGCTAGCTCCTGGATCGATC 58.455 55.000 17.36 17.36 0.00 3.69
2008 6296 0.170116 GCTAGCTCCTGGATCGATCG 59.830 60.000 18.81 9.36 0.00 3.69
2009 6297 1.814793 CTAGCTCCTGGATCGATCGA 58.185 55.000 21.86 21.86 0.00 3.59
2010 6298 2.364632 CTAGCTCCTGGATCGATCGAT 58.635 52.381 29.76 29.76 37.59 3.59
2011 6299 1.626686 AGCTCCTGGATCGATCGATT 58.373 50.000 29.89 14.96 34.60 3.34
2012 6300 2.796557 AGCTCCTGGATCGATCGATTA 58.203 47.619 29.89 20.55 34.60 1.75
2013 6301 2.752354 AGCTCCTGGATCGATCGATTAG 59.248 50.000 29.89 26.85 34.60 1.73
2014 6302 2.733858 GCTCCTGGATCGATCGATTAGC 60.734 54.545 29.89 25.34 34.60 3.09
2015 6303 2.752354 CTCCTGGATCGATCGATTAGCT 59.248 50.000 29.89 10.11 34.60 3.32
2016 6304 3.942115 CTCCTGGATCGATCGATTAGCTA 59.058 47.826 29.89 15.18 34.60 3.32
2017 6305 3.942115 TCCTGGATCGATCGATTAGCTAG 59.058 47.826 29.89 22.36 34.60 3.42
2018 6306 3.488384 CCTGGATCGATCGATTAGCTAGC 60.488 52.174 29.89 15.73 34.60 3.42
2019 6307 3.348119 TGGATCGATCGATTAGCTAGCT 58.652 45.455 29.89 23.12 34.60 3.32
2020 6308 4.514401 TGGATCGATCGATTAGCTAGCTA 58.486 43.478 29.89 20.67 34.60 3.32
2021 6309 4.572795 TGGATCGATCGATTAGCTAGCTAG 59.427 45.833 29.89 16.84 34.60 3.42
2022 6310 4.812091 GGATCGATCGATTAGCTAGCTAGA 59.188 45.833 29.89 17.62 34.60 2.43
2023 6311 5.468746 GGATCGATCGATTAGCTAGCTAGAT 59.531 44.000 29.89 21.06 34.60 1.98
2024 6312 6.647481 GGATCGATCGATTAGCTAGCTAGATA 59.353 42.308 29.89 19.87 34.60 1.98
2025 6313 7.148639 GGATCGATCGATTAGCTAGCTAGATAG 60.149 44.444 29.89 20.34 34.60 2.08
2026 6314 7.621426 GATCGATCGATTAGCTAGCTAGATAGC 60.621 44.444 29.89 28.52 40.59 2.97
2037 6325 2.717390 GCTAGATAGCTCCTGGATCGA 58.283 52.381 4.58 0.00 45.62 3.59
2038 6326 3.287222 GCTAGATAGCTCCTGGATCGAT 58.713 50.000 0.00 0.00 45.62 3.59
2039 6327 3.699038 GCTAGATAGCTCCTGGATCGATT 59.301 47.826 0.00 0.00 45.62 3.34
2040 6328 4.202010 GCTAGATAGCTCCTGGATCGATTC 60.202 50.000 0.00 0.00 45.62 2.52
2041 6329 3.096092 AGATAGCTCCTGGATCGATTCC 58.904 50.000 0.00 4.18 45.69 3.01
2048 6336 4.438346 GGATCGATTCCACACCGG 57.562 61.111 0.00 0.00 44.74 5.28
2049 6337 1.520666 GGATCGATTCCACACCGGT 59.479 57.895 0.00 0.00 44.74 5.28
2050 6338 0.810031 GGATCGATTCCACACCGGTG 60.810 60.000 32.83 32.83 44.74 4.94
2051 6339 1.429148 GATCGATTCCACACCGGTGC 61.429 60.000 34.26 15.70 43.88 5.01
2052 6340 1.899437 ATCGATTCCACACCGGTGCT 61.899 55.000 34.26 18.48 43.88 4.40
2053 6341 1.216977 CGATTCCACACCGGTGCTA 59.783 57.895 34.26 17.00 43.88 3.49
2054 6342 0.806102 CGATTCCACACCGGTGCTAG 60.806 60.000 34.26 22.87 43.88 3.42
2055 6343 1.078426 ATTCCACACCGGTGCTAGC 60.078 57.895 34.26 8.10 43.88 3.42
2056 6344 1.553690 ATTCCACACCGGTGCTAGCT 61.554 55.000 34.26 12.07 43.88 3.32
2057 6345 0.901114 TTCCACACCGGTGCTAGCTA 60.901 55.000 34.26 12.26 43.88 3.32
2058 6346 1.141881 CCACACCGGTGCTAGCTAG 59.858 63.158 34.26 16.84 43.88 3.42
2069 6357 2.403252 GCTAGCTAGCTTTTGGACCA 57.597 50.000 33.71 0.24 45.62 4.02
2070 6358 2.711542 GCTAGCTAGCTTTTGGACCAA 58.288 47.619 33.71 1.69 45.62 3.67
2071 6359 3.282885 GCTAGCTAGCTTTTGGACCAAT 58.717 45.455 33.71 0.00 45.62 3.16
2072 6360 3.696548 GCTAGCTAGCTTTTGGACCAATT 59.303 43.478 33.71 0.00 45.62 2.32
2073 6361 4.201960 GCTAGCTAGCTTTTGGACCAATTC 60.202 45.833 33.71 3.53 45.62 2.17
2074 6362 3.766545 AGCTAGCTTTTGGACCAATTCA 58.233 40.909 12.68 0.00 0.00 2.57
2075 6363 4.151883 AGCTAGCTTTTGGACCAATTCAA 58.848 39.130 12.68 0.00 0.00 2.69
2076 6364 4.219288 AGCTAGCTTTTGGACCAATTCAAG 59.781 41.667 12.68 10.05 0.00 3.02
2077 6365 3.391506 AGCTTTTGGACCAATTCAAGC 57.608 42.857 25.16 25.16 35.93 4.01
2078 6366 2.699846 AGCTTTTGGACCAATTCAAGCA 59.300 40.909 30.29 6.65 37.25 3.91
2079 6367 3.062042 GCTTTTGGACCAATTCAAGCAG 58.938 45.455 26.61 10.01 35.83 4.24
2080 6368 2.818130 TTTGGACCAATTCAAGCAGC 57.182 45.000 7.99 0.00 0.00 5.25
2081 6369 0.597568 TTGGACCAATTCAAGCAGCG 59.402 50.000 1.69 0.00 0.00 5.18
2082 6370 0.250684 TGGACCAATTCAAGCAGCGA 60.251 50.000 0.00 0.00 0.00 4.93
2083 6371 0.169009 GGACCAATTCAAGCAGCGAC 59.831 55.000 0.00 0.00 0.00 5.19
2084 6372 0.179215 GACCAATTCAAGCAGCGACG 60.179 55.000 0.00 0.00 0.00 5.12
2085 6373 0.602638 ACCAATTCAAGCAGCGACGA 60.603 50.000 0.00 0.00 0.00 4.20
2086 6374 0.179215 CCAATTCAAGCAGCGACGAC 60.179 55.000 0.00 0.00 0.00 4.34
2087 6375 0.517132 CAATTCAAGCAGCGACGACG 60.517 55.000 2.12 2.12 42.93 5.12
2088 6376 0.666274 AATTCAAGCAGCGACGACGA 60.666 50.000 12.29 0.00 42.66 4.20
2089 6377 1.073216 ATTCAAGCAGCGACGACGAG 61.073 55.000 12.29 3.58 42.66 4.18
2090 6378 3.175240 CAAGCAGCGACGACGAGG 61.175 66.667 12.29 2.78 42.66 4.63
2091 6379 4.421479 AAGCAGCGACGACGAGGG 62.421 66.667 12.29 0.11 42.66 4.30
2119 6407 4.819761 TGCCTCGTGCGAGCCATC 62.820 66.667 15.32 5.54 45.60 3.51
2121 6409 3.842923 CCTCGTGCGAGCCATCCT 61.843 66.667 15.32 0.00 40.69 3.24
2122 6410 2.490148 CCTCGTGCGAGCCATCCTA 61.490 63.158 15.32 0.00 40.69 2.94
2123 6411 1.007964 CTCGTGCGAGCCATCCTAG 60.008 63.158 8.71 0.00 35.31 3.02
2124 6412 2.028190 CGTGCGAGCCATCCTAGG 59.972 66.667 0.82 0.82 0.00 3.02
2131 6419 2.280457 GCCATCCTAGGCGTCAGC 60.280 66.667 2.96 0.00 46.12 4.26
2132 6420 2.028190 CCATCCTAGGCGTCAGCG 59.972 66.667 2.96 0.00 46.35 5.18
2133 6421 2.028190 CATCCTAGGCGTCAGCGG 59.972 66.667 2.96 0.00 46.35 5.52
2142 6430 2.508439 CGTCAGCGGCACCGTATT 60.508 61.111 11.27 0.00 42.09 1.89
2143 6431 2.098233 CGTCAGCGGCACCGTATTT 61.098 57.895 11.27 0.00 42.09 1.40
2144 6432 1.632046 CGTCAGCGGCACCGTATTTT 61.632 55.000 11.27 0.00 42.09 1.82
2145 6433 0.179200 GTCAGCGGCACCGTATTTTG 60.179 55.000 11.27 2.70 42.09 2.44
2146 6434 1.514014 CAGCGGCACCGTATTTTGC 60.514 57.895 11.27 0.00 42.09 3.68
2150 6438 2.874751 GCACCGTATTTTGCCGCT 59.125 55.556 0.00 0.00 32.21 5.52
2151 6439 1.211709 GCACCGTATTTTGCCGCTT 59.788 52.632 0.00 0.00 32.21 4.68
2152 6440 0.388006 GCACCGTATTTTGCCGCTTT 60.388 50.000 0.00 0.00 32.21 3.51
2153 6441 1.335935 CACCGTATTTTGCCGCTTTG 58.664 50.000 0.00 0.00 0.00 2.77
2154 6442 0.955905 ACCGTATTTTGCCGCTTTGT 59.044 45.000 0.00 0.00 0.00 2.83
2155 6443 1.335506 ACCGTATTTTGCCGCTTTGTG 60.336 47.619 0.00 0.00 0.00 3.33
2156 6444 0.707822 CGTATTTTGCCGCTTTGTGC 59.292 50.000 0.00 0.00 38.57 4.57
2165 6453 4.389576 GCTTTGTGCGCTGTCCGG 62.390 66.667 9.73 0.00 37.44 5.14
2166 6454 3.726517 CTTTGTGCGCTGTCCGGG 61.727 66.667 9.73 0.00 37.44 5.73
2175 6463 3.072468 CTGTCCGGGGGCTTCGTA 61.072 66.667 0.00 0.00 0.00 3.43
2176 6464 3.072468 TGTCCGGGGGCTTCGTAG 61.072 66.667 0.00 0.00 0.00 3.51
2177 6465 3.846430 GTCCGGGGGCTTCGTAGG 61.846 72.222 0.00 0.00 0.00 3.18
2178 6466 4.064768 TCCGGGGGCTTCGTAGGA 62.065 66.667 0.00 0.00 0.00 2.94
2179 6467 3.537874 CCGGGGGCTTCGTAGGAG 61.538 72.222 0.00 0.00 0.00 3.69
2180 6468 4.222847 CGGGGGCTTCGTAGGAGC 62.223 72.222 0.00 0.00 0.00 4.70
2181 6469 4.222847 GGGGGCTTCGTAGGAGCG 62.223 72.222 0.00 0.00 0.00 5.03
2182 6470 3.145551 GGGGCTTCGTAGGAGCGA 61.146 66.667 0.00 0.00 39.28 4.93
2183 6471 2.718073 GGGGCTTCGTAGGAGCGAA 61.718 63.158 1.08 1.08 46.78 4.70
2184 6472 1.518792 GGGCTTCGTAGGAGCGAAC 60.519 63.158 0.00 0.00 44.55 3.95
2185 6473 1.511768 GGCTTCGTAGGAGCGAACT 59.488 57.895 0.00 0.00 44.55 3.01
2186 6474 0.737219 GGCTTCGTAGGAGCGAACTA 59.263 55.000 0.00 0.00 44.55 2.24
2187 6475 1.268640 GGCTTCGTAGGAGCGAACTAG 60.269 57.143 0.00 0.00 44.55 2.57
2188 6476 1.860800 GCTTCGTAGGAGCGAACTAGC 60.861 57.143 0.00 0.00 44.55 3.42
2196 6484 3.188786 GCGAACTAGCTGGCCGTG 61.189 66.667 12.56 0.00 0.00 4.94
2197 6485 2.509336 CGAACTAGCTGGCCGTGG 60.509 66.667 0.00 0.00 0.00 4.94
2198 6486 2.978824 GAACTAGCTGGCCGTGGA 59.021 61.111 0.00 0.00 0.00 4.02
2199 6487 1.448013 GAACTAGCTGGCCGTGGAC 60.448 63.158 0.00 0.00 0.00 4.02
2200 6488 2.167398 GAACTAGCTGGCCGTGGACA 62.167 60.000 0.00 0.00 0.00 4.02
2201 6489 2.125512 CTAGCTGGCCGTGGACAC 60.126 66.667 0.00 0.00 0.00 3.67
2214 6502 3.861569 GTGGACACGAGTGAGAAAAAG 57.138 47.619 10.50 0.00 0.00 2.27
2215 6503 3.454375 GTGGACACGAGTGAGAAAAAGA 58.546 45.455 10.50 0.00 0.00 2.52
2216 6504 3.869246 GTGGACACGAGTGAGAAAAAGAA 59.131 43.478 10.50 0.00 0.00 2.52
2217 6505 4.025647 GTGGACACGAGTGAGAAAAAGAAG 60.026 45.833 10.50 0.00 0.00 2.85
2218 6506 4.142026 TGGACACGAGTGAGAAAAAGAAGA 60.142 41.667 10.50 0.00 0.00 2.87
2219 6507 4.809426 GGACACGAGTGAGAAAAAGAAGAA 59.191 41.667 10.50 0.00 0.00 2.52
2220 6508 5.050702 GGACACGAGTGAGAAAAAGAAGAAG 60.051 44.000 10.50 0.00 0.00 2.85
2221 6509 5.661458 ACACGAGTGAGAAAAAGAAGAAGA 58.339 37.500 10.50 0.00 0.00 2.87
2222 6510 6.106673 ACACGAGTGAGAAAAAGAAGAAGAA 58.893 36.000 10.50 0.00 0.00 2.52
2223 6511 6.256757 ACACGAGTGAGAAAAAGAAGAAGAAG 59.743 38.462 10.50 0.00 0.00 2.85
2224 6512 6.256757 CACGAGTGAGAAAAAGAAGAAGAAGT 59.743 38.462 0.00 0.00 0.00 3.01
2225 6513 6.256757 ACGAGTGAGAAAAAGAAGAAGAAGTG 59.743 38.462 0.00 0.00 0.00 3.16
2226 6514 6.292596 CGAGTGAGAAAAAGAAGAAGAAGTGG 60.293 42.308 0.00 0.00 0.00 4.00
2227 6515 5.825151 AGTGAGAAAAAGAAGAAGAAGTGGG 59.175 40.000 0.00 0.00 0.00 4.61
2228 6516 5.823045 GTGAGAAAAAGAAGAAGAAGTGGGA 59.177 40.000 0.00 0.00 0.00 4.37
2229 6517 6.318900 GTGAGAAAAAGAAGAAGAAGTGGGAA 59.681 38.462 0.00 0.00 0.00 3.97
2230 6518 6.889722 TGAGAAAAAGAAGAAGAAGTGGGAAA 59.110 34.615 0.00 0.00 0.00 3.13
2231 6519 7.067494 TGAGAAAAAGAAGAAGAAGTGGGAAAG 59.933 37.037 0.00 0.00 0.00 2.62
2232 6520 7.119387 AGAAAAAGAAGAAGAAGTGGGAAAGA 58.881 34.615 0.00 0.00 0.00 2.52
2233 6521 7.615757 AGAAAAAGAAGAAGAAGTGGGAAAGAA 59.384 33.333 0.00 0.00 0.00 2.52
2234 6522 7.904558 AAAAGAAGAAGAAGTGGGAAAGAAT 57.095 32.000 0.00 0.00 0.00 2.40
2235 6523 8.996651 AAAAGAAGAAGAAGTGGGAAAGAATA 57.003 30.769 0.00 0.00 0.00 1.75
2236 6524 9.593565 AAAAGAAGAAGAAGTGGGAAAGAATAT 57.406 29.630 0.00 0.00 0.00 1.28
2238 6526 9.674068 AAGAAGAAGAAGTGGGAAAGAATATAC 57.326 33.333 0.00 0.00 0.00 1.47
2239 6527 7.982354 AGAAGAAGAAGTGGGAAAGAATATACG 59.018 37.037 0.00 0.00 0.00 3.06
2240 6528 6.049790 AGAAGAAGTGGGAAAGAATATACGC 58.950 40.000 0.00 0.00 0.00 4.42
2241 6529 4.369182 AGAAGTGGGAAAGAATATACGCG 58.631 43.478 3.53 3.53 0.00 6.01
2242 6530 4.098960 AGAAGTGGGAAAGAATATACGCGA 59.901 41.667 15.93 0.00 0.00 5.87
2243 6531 4.395959 AGTGGGAAAGAATATACGCGAA 57.604 40.909 15.93 0.00 0.00 4.70
2244 6532 4.957296 AGTGGGAAAGAATATACGCGAAT 58.043 39.130 15.93 0.00 0.00 3.34
2245 6533 6.092955 AGTGGGAAAGAATATACGCGAATA 57.907 37.500 15.93 0.00 0.00 1.75
2246 6534 6.698380 AGTGGGAAAGAATATACGCGAATAT 58.302 36.000 15.93 3.33 0.00 1.28
2247 6535 7.833786 AGTGGGAAAGAATATACGCGAATATA 58.166 34.615 15.93 5.95 0.00 0.86
2248 6536 7.758528 AGTGGGAAAGAATATACGCGAATATAC 59.241 37.037 15.93 0.00 0.00 1.47
2249 6537 7.543172 GTGGGAAAGAATATACGCGAATATACA 59.457 37.037 15.93 0.00 0.00 2.29
2250 6538 7.758076 TGGGAAAGAATATACGCGAATATACAG 59.242 37.037 15.93 0.00 0.00 2.74
2251 6539 7.758528 GGGAAAGAATATACGCGAATATACAGT 59.241 37.037 15.93 0.00 0.00 3.55
2252 6540 9.136952 GGAAAGAATATACGCGAATATACAGTT 57.863 33.333 15.93 0.00 0.00 3.16
2281 6569 9.863845 ATAGTCTTAAGTTTAAAGAGTGAGCTC 57.136 33.333 6.82 6.82 41.94 4.09
2282 6570 6.864165 AGTCTTAAGTTTAAAGAGTGAGCTCG 59.136 38.462 9.64 0.00 46.03 5.03
2283 6571 6.089685 GTCTTAAGTTTAAAGAGTGAGCTCGG 59.910 42.308 9.64 0.00 46.03 4.63
2284 6572 4.338379 AAGTTTAAAGAGTGAGCTCGGT 57.662 40.909 9.64 0.00 46.03 4.69
2285 6573 3.915536 AGTTTAAAGAGTGAGCTCGGTC 58.084 45.455 9.64 8.13 46.03 4.79
2286 6574 3.321111 AGTTTAAAGAGTGAGCTCGGTCA 59.679 43.478 9.64 0.00 46.03 4.02
2287 6575 3.299340 TTAAAGAGTGAGCTCGGTCAC 57.701 47.619 18.61 18.61 46.03 3.67
2291 6579 2.433318 GTGAGCTCGGTCACAGCC 60.433 66.667 20.64 0.00 45.34 4.85
2292 6580 3.695606 TGAGCTCGGTCACAGCCC 61.696 66.667 9.64 0.00 37.63 5.19
2293 6581 3.695606 GAGCTCGGTCACAGCCCA 61.696 66.667 0.00 0.00 37.63 5.36
2294 6582 3.240134 GAGCTCGGTCACAGCCCAA 62.240 63.158 0.00 0.00 37.63 4.12
2295 6583 2.281484 GCTCGGTCACAGCCCAAA 60.281 61.111 0.00 0.00 0.00 3.28
2296 6584 2.617274 GCTCGGTCACAGCCCAAAC 61.617 63.158 0.00 0.00 0.00 2.93
2297 6585 1.966451 CTCGGTCACAGCCCAAACC 60.966 63.158 0.00 0.00 0.00 3.27
2298 6586 2.203280 CGGTCACAGCCCAAACCA 60.203 61.111 0.00 0.00 0.00 3.67
2299 6587 1.826054 CGGTCACAGCCCAAACCAA 60.826 57.895 0.00 0.00 0.00 3.67
2300 6588 1.739667 GGTCACAGCCCAAACCAAC 59.260 57.895 0.00 0.00 0.00 3.77
2301 6589 0.755327 GGTCACAGCCCAAACCAACT 60.755 55.000 0.00 0.00 0.00 3.16
2302 6590 0.668535 GTCACAGCCCAAACCAACTC 59.331 55.000 0.00 0.00 0.00 3.01
2303 6591 0.550914 TCACAGCCCAAACCAACTCT 59.449 50.000 0.00 0.00 0.00 3.24
2304 6592 1.064017 TCACAGCCCAAACCAACTCTT 60.064 47.619 0.00 0.00 0.00 2.85
2305 6593 1.338020 CACAGCCCAAACCAACTCTTC 59.662 52.381 0.00 0.00 0.00 2.87
2306 6594 1.064017 ACAGCCCAAACCAACTCTTCA 60.064 47.619 0.00 0.00 0.00 3.02
2307 6595 2.031120 CAGCCCAAACCAACTCTTCAA 58.969 47.619 0.00 0.00 0.00 2.69
2308 6596 2.430332 CAGCCCAAACCAACTCTTCAAA 59.570 45.455 0.00 0.00 0.00 2.69
2309 6597 3.070015 CAGCCCAAACCAACTCTTCAAAT 59.930 43.478 0.00 0.00 0.00 2.32
2310 6598 3.070015 AGCCCAAACCAACTCTTCAAATG 59.930 43.478 0.00 0.00 0.00 2.32
2311 6599 3.181466 GCCCAAACCAACTCTTCAAATGT 60.181 43.478 0.00 0.00 0.00 2.71
2312 6600 4.370917 CCCAAACCAACTCTTCAAATGTG 58.629 43.478 0.00 0.00 0.00 3.21
2313 6601 3.803778 CCAAACCAACTCTTCAAATGTGC 59.196 43.478 0.00 0.00 0.00 4.57
2314 6602 4.441913 CCAAACCAACTCTTCAAATGTGCT 60.442 41.667 0.00 0.00 0.00 4.40
2315 6603 5.111293 CAAACCAACTCTTCAAATGTGCTT 58.889 37.500 0.00 0.00 0.00 3.91
2316 6604 5.343307 AACCAACTCTTCAAATGTGCTTT 57.657 34.783 0.00 0.00 0.00 3.51
2317 6605 4.936891 ACCAACTCTTCAAATGTGCTTTC 58.063 39.130 0.00 0.00 0.00 2.62
2318 6606 4.202151 ACCAACTCTTCAAATGTGCTTTCC 60.202 41.667 0.00 0.00 0.00 3.13
2319 6607 4.301628 CAACTCTTCAAATGTGCTTTCCC 58.698 43.478 0.00 0.00 0.00 3.97
2320 6608 3.565307 ACTCTTCAAATGTGCTTTCCCA 58.435 40.909 0.00 0.00 0.00 4.37
2321 6609 3.571401 ACTCTTCAAATGTGCTTTCCCAG 59.429 43.478 0.00 0.00 0.00 4.45
2322 6610 3.565307 TCTTCAAATGTGCTTTCCCAGT 58.435 40.909 0.00 0.00 0.00 4.00
2323 6611 3.569701 TCTTCAAATGTGCTTTCCCAGTC 59.430 43.478 0.00 0.00 0.00 3.51
2324 6612 3.228188 TCAAATGTGCTTTCCCAGTCT 57.772 42.857 0.00 0.00 0.00 3.24
2325 6613 3.149196 TCAAATGTGCTTTCCCAGTCTC 58.851 45.455 0.00 0.00 0.00 3.36
2326 6614 1.813513 AATGTGCTTTCCCAGTCTCG 58.186 50.000 0.00 0.00 0.00 4.04
2327 6615 0.674895 ATGTGCTTTCCCAGTCTCGC 60.675 55.000 0.00 0.00 0.00 5.03
2328 6616 2.048222 TGCTTTCCCAGTCTCGCG 60.048 61.111 0.00 0.00 0.00 5.87
2329 6617 2.261671 GCTTTCCCAGTCTCGCGA 59.738 61.111 9.26 9.26 0.00 5.87
2330 6618 1.153549 GCTTTCCCAGTCTCGCGAT 60.154 57.895 10.36 0.00 0.00 4.58
2331 6619 0.741221 GCTTTCCCAGTCTCGCGATT 60.741 55.000 10.36 0.00 0.00 3.34
2332 6620 1.726853 CTTTCCCAGTCTCGCGATTT 58.273 50.000 10.36 0.00 0.00 2.17
2333 6621 2.888594 CTTTCCCAGTCTCGCGATTTA 58.111 47.619 10.36 0.00 0.00 1.40
2334 6622 3.259064 CTTTCCCAGTCTCGCGATTTAA 58.741 45.455 10.36 0.00 0.00 1.52
2335 6623 2.579207 TCCCAGTCTCGCGATTTAAG 57.421 50.000 10.36 0.00 0.00 1.85
2336 6624 1.136305 TCCCAGTCTCGCGATTTAAGG 59.864 52.381 10.36 8.85 0.00 2.69
2337 6625 1.571919 CCAGTCTCGCGATTTAAGGG 58.428 55.000 10.36 3.07 0.00 3.95
2338 6626 1.571919 CAGTCTCGCGATTTAAGGGG 58.428 55.000 10.36 0.00 0.00 4.79
2339 6627 1.134788 CAGTCTCGCGATTTAAGGGGT 60.135 52.381 10.36 0.00 0.00 4.95
2340 6628 1.136500 AGTCTCGCGATTTAAGGGGTC 59.864 52.381 10.36 0.00 0.00 4.46
2341 6629 1.136500 GTCTCGCGATTTAAGGGGTCT 59.864 52.381 10.36 0.00 0.00 3.85
2342 6630 1.136305 TCTCGCGATTTAAGGGGTCTG 59.864 52.381 10.36 0.00 0.00 3.51
2343 6631 0.461339 TCGCGATTTAAGGGGTCTGC 60.461 55.000 3.71 0.00 0.00 4.26
2344 6632 0.462047 CGCGATTTAAGGGGTCTGCT 60.462 55.000 0.00 0.00 0.00 4.24
2345 6633 1.202486 CGCGATTTAAGGGGTCTGCTA 60.202 52.381 0.00 0.00 0.00 3.49
2346 6634 2.484889 GCGATTTAAGGGGTCTGCTAG 58.515 52.381 0.00 0.00 0.00 3.42
2347 6635 2.102588 GCGATTTAAGGGGTCTGCTAGA 59.897 50.000 0.00 0.00 0.00 2.43
2348 6636 3.800604 GCGATTTAAGGGGTCTGCTAGAG 60.801 52.174 0.00 0.00 0.00 2.43
2349 6637 3.637229 CGATTTAAGGGGTCTGCTAGAGA 59.363 47.826 0.00 0.00 0.00 3.10
2350 6638 4.282195 CGATTTAAGGGGTCTGCTAGAGAT 59.718 45.833 0.00 0.00 31.63 2.75
2351 6639 5.546526 GATTTAAGGGGTCTGCTAGAGATG 58.453 45.833 0.00 0.00 31.63 2.90
2352 6640 1.127343 AAGGGGTCTGCTAGAGATGC 58.873 55.000 0.00 0.00 31.63 3.91
2353 6641 0.264359 AGGGGTCTGCTAGAGATGCT 59.736 55.000 0.00 0.00 31.63 3.79
2354 6642 0.678950 GGGGTCTGCTAGAGATGCTC 59.321 60.000 0.00 0.00 31.63 4.26
2355 6643 1.703411 GGGTCTGCTAGAGATGCTCT 58.297 55.000 0.00 2.22 43.83 4.09
2356 6644 2.489985 GGGGTCTGCTAGAGATGCTCTA 60.490 54.545 0.00 4.30 41.50 2.43
2357 6645 3.226777 GGGTCTGCTAGAGATGCTCTAA 58.773 50.000 5.75 0.00 41.74 2.10
2358 6646 3.255642 GGGTCTGCTAGAGATGCTCTAAG 59.744 52.174 5.75 2.25 41.74 2.18
2359 6647 3.305335 GGTCTGCTAGAGATGCTCTAAGC 60.305 52.174 5.75 10.60 41.74 3.09
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
30 31 8.165239 TGTGCTTCTGTCATGTTATTTACTTT 57.835 30.769 0.00 0.00 0.00 2.66
46 47 3.252701 AGCAGTTGATTCTTGTGCTTCTG 59.747 43.478 0.00 0.00 41.72 3.02
111 112 5.051641 CGAAAACCGATAAGCTCATACTCAC 60.052 44.000 0.00 0.00 41.76 3.51
128 129 2.689635 CGCATCAACGTATCGAAAACC 58.310 47.619 0.00 0.00 0.00 3.27
147 148 3.188048 GGATATGAAGATTTCTGGCAGCG 59.812 47.826 10.34 0.00 0.00 5.18
153 154 8.562892 ACGCAAAATAGGATATGAAGATTTCTG 58.437 33.333 0.00 0.00 0.00 3.02
160 161 7.194607 ACATGACGCAAAATAGGATATGAAG 57.805 36.000 0.00 0.00 0.00 3.02
164 165 6.061441 TGGAACATGACGCAAAATAGGATAT 58.939 36.000 0.00 0.00 0.00 1.63
171 172 3.317711 TGAGTTGGAACATGACGCAAAAT 59.682 39.130 0.00 0.00 39.30 1.82
181 187 2.489073 GGGTCCTGTTGAGTTGGAACAT 60.489 50.000 0.00 0.00 39.21 2.71
200 206 7.079451 ACTTTAGGTATATCTCCAATGTGGG 57.921 40.000 0.00 0.00 38.32 4.61
236 242 7.852550 ACATGATTATGGAAGATGAGAGAGA 57.147 36.000 0.00 0.00 38.66 3.10
328 336 9.183368 AGGAGGAAGAAGACAAAATATGATTTC 57.817 33.333 0.00 0.00 0.00 2.17
337 345 3.328050 GGAGGAGGAGGAAGAAGACAAAA 59.672 47.826 0.00 0.00 0.00 2.44
359 367 4.615961 ACGTTCTTCAATTACTCTTCGTCG 59.384 41.667 0.00 0.00 0.00 5.12
370 378 4.065789 GTTGAGGGAGACGTTCTTCAATT 58.934 43.478 12.42 0.00 34.40 2.32
373 381 2.317040 AGTTGAGGGAGACGTTCTTCA 58.683 47.619 0.00 0.00 0.00 3.02
393 401 4.717233 ATTGCATAGCGTGGATGAAAAA 57.283 36.364 0.00 0.00 0.00 1.94
404 412 5.768333 TCAATCGAGAATATTGCATAGCG 57.232 39.130 0.00 0.00 34.89 4.26
486 495 3.959975 GCCCGCAAAGTGTTCGCA 61.960 61.111 0.00 0.00 0.00 5.10
504 517 1.281419 TCGAGACTCTCACCTCCTCT 58.719 55.000 6.86 0.00 0.00 3.69
574 587 1.372087 CCTCTTGCGAAGTCCCATGC 61.372 60.000 0.00 0.00 0.00 4.06
587 606 6.033341 CACGACTAGAAGAATCTTCCTCTTG 58.967 44.000 18.46 10.86 37.10 3.02
589 608 4.642885 CCACGACTAGAAGAATCTTCCTCT 59.357 45.833 18.46 3.89 37.10 3.69
684 882 2.212687 CGTACGTAAGCAATGCGACTAC 59.787 50.000 7.22 2.53 39.78 2.73
806 5008 1.181098 CCCAACTCCCAAGGCACAAG 61.181 60.000 0.00 0.00 0.00 3.16
844 5046 3.632189 CTTGTTCTCCAAGCGAAAAAGG 58.368 45.455 0.00 0.00 43.84 3.11
874 5076 0.038744 ATATATGCCTGCCTGCCCAC 59.961 55.000 0.00 0.00 0.00 4.61
884 5086 2.677037 GCCCGCGTCTTTATATATGCCT 60.677 50.000 4.92 0.00 0.00 4.75
889 5091 1.341852 TGCTGCCCGCGTCTTTATATA 59.658 47.619 4.92 0.00 43.27 0.86
921 5125 2.037251 GTCTGCAGGTTGTAGTTGGAGA 59.963 50.000 15.13 0.00 37.03 3.71
977 5181 4.493618 TGCTAGCTATCTATGGGGTTTCT 58.506 43.478 17.23 0.00 0.00 2.52
978 5182 4.891992 TGCTAGCTATCTATGGGGTTTC 57.108 45.455 17.23 0.00 0.00 2.78
982 5186 4.679106 CGACATTGCTAGCTATCTATGGGG 60.679 50.000 17.23 9.33 0.00 4.96
986 5190 3.428180 CGCCGACATTGCTAGCTATCTAT 60.428 47.826 17.23 1.61 0.00 1.98
1089 5293 1.343069 GAAGATACCAGATCCCGGCT 58.657 55.000 0.00 0.00 0.00 5.52
1107 5311 1.467713 GGTTTGTCGCCGTTTTGTTGA 60.468 47.619 0.00 0.00 0.00 3.18
1251 5455 2.530151 TCCTCTGCACCCAGCCTT 60.530 61.111 0.00 0.00 44.83 4.35
1278 5482 0.951040 CCCGCTGCGTCTCTTTCTTT 60.951 55.000 21.59 0.00 0.00 2.52
1383 5592 5.044550 AGGACCTGCTATCTCCTTTTTCATT 60.045 40.000 0.00 0.00 29.41 2.57
1400 5609 4.910458 TTCTCTCCCTAAAAAGGACCTG 57.090 45.455 0.00 0.00 0.00 4.00
1411 5621 7.093465 CCGCCATTATAACTAATTCTCTCCCTA 60.093 40.741 0.00 0.00 0.00 3.53
1412 5622 6.295916 CCGCCATTATAACTAATTCTCTCCCT 60.296 42.308 0.00 0.00 0.00 4.20
1415 5625 7.441458 ACAACCGCCATTATAACTAATTCTCTC 59.559 37.037 0.00 0.00 0.00 3.20
1416 5626 7.226720 CACAACCGCCATTATAACTAATTCTCT 59.773 37.037 0.00 0.00 0.00 3.10
1417 5627 7.352739 CACAACCGCCATTATAACTAATTCTC 58.647 38.462 0.00 0.00 0.00 2.87
1422 5639 4.886247 GCACAACCGCCATTATAACTAA 57.114 40.909 0.00 0.00 0.00 2.24
1472 5691 7.155328 TGCCATCAAACCATAATTAAACGTTT 58.845 30.769 18.90 18.90 0.00 3.60
1495 5714 5.406477 GTCCCATTCACAAAGATTTTTCTGC 59.594 40.000 0.00 0.00 0.00 4.26
1496 5715 5.928264 GGTCCCATTCACAAAGATTTTTCTG 59.072 40.000 0.00 0.00 0.00 3.02
1500 5719 4.230455 TGGGTCCCATTCACAAAGATTTT 58.770 39.130 6.47 0.00 0.00 1.82
1519 5738 2.368221 TCCAAACTGCAAAAAGGATGGG 59.632 45.455 0.00 0.00 31.44 4.00
1578 5814 2.810439 TCATTGTTCTTTTTGCGGGG 57.190 45.000 0.00 0.00 0.00 5.73
1635 5872 3.259902 GAATCGGGGACACAAAGACTAC 58.740 50.000 0.00 0.00 0.00 2.73
1636 5873 2.235402 GGAATCGGGGACACAAAGACTA 59.765 50.000 0.00 0.00 0.00 2.59
1679 5964 0.981183 AGAATACCGAGCCACCAACA 59.019 50.000 0.00 0.00 0.00 3.33
1768 6053 3.197766 TGCTCGTTGAGGATGGACTAAAT 59.802 43.478 0.00 0.00 0.00 1.40
1813 6101 2.985456 GTGCCTCTGCTACTGCCT 59.015 61.111 0.00 0.00 38.71 4.75
1822 6110 0.951040 GAACCCAGTTCGTGCCTCTG 60.951 60.000 0.00 0.00 32.81 3.35
1825 6113 0.250338 GAAGAACCCAGTTCGTGCCT 60.250 55.000 0.62 0.00 45.96 4.75
1826 6114 1.235281 GGAAGAACCCAGTTCGTGCC 61.235 60.000 0.62 1.58 45.96 5.01
1827 6115 1.566018 CGGAAGAACCCAGTTCGTGC 61.566 60.000 0.62 3.12 45.96 5.34
1828 6116 1.566018 GCGGAAGAACCCAGTTCGTG 61.566 60.000 0.62 0.00 45.96 4.35
1829 6117 1.301479 GCGGAAGAACCCAGTTCGT 60.301 57.895 2.04 0.00 45.96 3.85
1830 6118 1.291877 CTGCGGAAGAACCCAGTTCG 61.292 60.000 2.04 0.00 45.96 3.95
1831 6119 1.578206 GCTGCGGAAGAACCCAGTTC 61.578 60.000 0.00 0.00 42.25 3.01
1832 6120 1.600916 GCTGCGGAAGAACCCAGTT 60.601 57.895 0.00 0.00 38.40 3.16
1833 6121 2.032681 GCTGCGGAAGAACCCAGT 59.967 61.111 0.00 0.00 38.40 4.00
1834 6122 2.747855 GGCTGCGGAAGAACCCAG 60.748 66.667 0.00 0.00 38.82 4.45
1835 6123 3.249189 AGGCTGCGGAAGAACCCA 61.249 61.111 0.00 0.00 34.64 4.51
1836 6124 2.436824 GAGGCTGCGGAAGAACCC 60.437 66.667 0.00 0.00 34.64 4.11
1837 6125 1.448717 GAGAGGCTGCGGAAGAACC 60.449 63.158 0.00 0.00 0.00 3.62
1838 6126 0.459411 GAGAGAGGCTGCGGAAGAAC 60.459 60.000 0.00 0.00 0.00 3.01
1839 6127 1.608717 GGAGAGAGGCTGCGGAAGAA 61.609 60.000 0.00 0.00 0.00 2.52
1840 6128 2.055042 GGAGAGAGGCTGCGGAAGA 61.055 63.158 0.00 0.00 0.00 2.87
1841 6129 2.498726 GGAGAGAGGCTGCGGAAG 59.501 66.667 0.00 0.00 0.00 3.46
1860 6148 4.849329 GGTACGGACGGCAGCTCG 62.849 72.222 0.00 0.00 0.00 5.03
1861 6149 3.755628 TGGTACGGACGGCAGCTC 61.756 66.667 0.00 0.00 0.00 4.09
1862 6150 4.065281 GTGGTACGGACGGCAGCT 62.065 66.667 0.00 0.00 0.00 4.24
1863 6151 3.984200 GAGTGGTACGGACGGCAGC 62.984 68.421 0.00 0.00 0.00 5.25
1864 6152 2.181021 GAGTGGTACGGACGGCAG 59.819 66.667 0.00 0.00 0.00 4.85
1865 6153 3.740397 CGAGTGGTACGGACGGCA 61.740 66.667 0.00 0.00 0.00 5.69
1866 6154 3.673867 GACGAGTGGTACGGACGGC 62.674 68.421 0.00 0.00 34.93 5.68
1867 6155 1.975363 GAGACGAGTGGTACGGACGG 61.975 65.000 0.00 0.00 34.93 4.79
1868 6156 1.423056 GAGACGAGTGGTACGGACG 59.577 63.158 0.00 0.00 34.93 4.79
1869 6157 0.957395 TGGAGACGAGTGGTACGGAC 60.957 60.000 0.00 0.00 34.93 4.79
1870 6158 0.675837 CTGGAGACGAGTGGTACGGA 60.676 60.000 0.00 0.00 34.93 4.69
1871 6159 0.959372 ACTGGAGACGAGTGGTACGG 60.959 60.000 0.00 0.00 34.93 4.02
1872 6160 0.447011 GACTGGAGACGAGTGGTACG 59.553 60.000 0.00 0.00 0.00 3.67
1873 6161 0.447011 CGACTGGAGACGAGTGGTAC 59.553 60.000 0.00 0.00 35.37 3.34
1874 6162 0.035881 ACGACTGGAGACGAGTGGTA 59.964 55.000 5.55 0.00 37.02 3.25
1875 6163 1.228184 ACGACTGGAGACGAGTGGT 60.228 57.895 5.55 0.00 37.02 4.16
1876 6164 1.502640 GACGACTGGAGACGAGTGG 59.497 63.158 5.55 0.00 37.02 4.00
1877 6165 1.132844 CGACGACTGGAGACGAGTG 59.867 63.158 5.55 0.00 37.02 3.51
1878 6166 0.391395 ATCGACGACTGGAGACGAGT 60.391 55.000 0.00 0.00 37.02 4.18
1879 6167 1.568606 TATCGACGACTGGAGACGAG 58.431 55.000 0.00 0.19 37.02 4.18
1880 6168 2.133553 GATATCGACGACTGGAGACGA 58.866 52.381 0.00 0.00 37.02 4.20
1881 6169 2.136728 AGATATCGACGACTGGAGACG 58.863 52.381 0.00 0.00 38.99 4.18
1882 6170 2.481185 GGAGATATCGACGACTGGAGAC 59.519 54.545 0.00 0.00 0.00 3.36
1883 6171 2.550423 GGGAGATATCGACGACTGGAGA 60.550 54.545 0.00 0.00 0.00 3.71
1884 6172 1.807742 GGGAGATATCGACGACTGGAG 59.192 57.143 0.00 0.00 0.00 3.86
1885 6173 1.420514 AGGGAGATATCGACGACTGGA 59.579 52.381 0.00 0.00 0.00 3.86
1886 6174 1.537638 CAGGGAGATATCGACGACTGG 59.462 57.143 0.00 0.00 0.00 4.00
1887 6175 1.068885 GCAGGGAGATATCGACGACTG 60.069 57.143 0.00 2.15 0.00 3.51
1888 6176 1.202830 AGCAGGGAGATATCGACGACT 60.203 52.381 0.00 0.00 0.00 4.18
1889 6177 1.240256 AGCAGGGAGATATCGACGAC 58.760 55.000 0.00 0.00 0.00 4.34
1890 6178 1.880675 GAAGCAGGGAGATATCGACGA 59.119 52.381 0.00 0.00 0.00 4.20
1891 6179 1.609072 TGAAGCAGGGAGATATCGACG 59.391 52.381 0.00 0.00 0.00 5.12
1892 6180 3.181475 TGTTGAAGCAGGGAGATATCGAC 60.181 47.826 0.00 0.00 0.00 4.20
1893 6181 3.031013 TGTTGAAGCAGGGAGATATCGA 58.969 45.455 0.00 0.00 0.00 3.59
1894 6182 3.459232 TGTTGAAGCAGGGAGATATCG 57.541 47.619 0.00 0.00 0.00 2.92
1895 6183 6.705863 ATTTTGTTGAAGCAGGGAGATATC 57.294 37.500 0.00 0.00 0.00 1.63
1896 6184 6.894103 AGAATTTTGTTGAAGCAGGGAGATAT 59.106 34.615 0.00 0.00 0.00 1.63
1897 6185 6.151648 CAGAATTTTGTTGAAGCAGGGAGATA 59.848 38.462 0.00 0.00 0.00 1.98
1898 6186 5.047519 CAGAATTTTGTTGAAGCAGGGAGAT 60.048 40.000 0.00 0.00 0.00 2.75
1899 6187 4.279169 CAGAATTTTGTTGAAGCAGGGAGA 59.721 41.667 0.00 0.00 0.00 3.71
1900 6188 4.553323 CAGAATTTTGTTGAAGCAGGGAG 58.447 43.478 0.00 0.00 0.00 4.30
1901 6189 3.243839 GCAGAATTTTGTTGAAGCAGGGA 60.244 43.478 0.00 0.00 0.00 4.20
1902 6190 3.062042 GCAGAATTTTGTTGAAGCAGGG 58.938 45.455 0.00 0.00 0.00 4.45
1903 6191 3.719924 TGCAGAATTTTGTTGAAGCAGG 58.280 40.909 0.00 0.00 0.00 4.85
1904 6192 4.966850 CTGCAGAATTTTGTTGAAGCAG 57.033 40.909 8.42 0.00 41.64 4.24
1905 6193 3.125316 GCTGCAGAATTTTGTTGAAGCA 58.875 40.909 20.43 0.00 0.00 3.91
1906 6194 2.154389 CGCTGCAGAATTTTGTTGAAGC 59.846 45.455 20.43 0.00 0.00 3.86
1907 6195 2.154389 GCGCTGCAGAATTTTGTTGAAG 59.846 45.455 20.43 0.00 0.00 3.02
1908 6196 2.126467 GCGCTGCAGAATTTTGTTGAA 58.874 42.857 20.43 0.00 0.00 2.69
1909 6197 1.769733 GCGCTGCAGAATTTTGTTGA 58.230 45.000 20.43 0.00 0.00 3.18
1910 6198 0.431984 CGCGCTGCAGAATTTTGTTG 59.568 50.000 20.43 0.00 0.00 3.33
1911 6199 0.030638 ACGCGCTGCAGAATTTTGTT 59.969 45.000 20.43 0.00 0.00 2.83
1912 6200 0.661187 CACGCGCTGCAGAATTTTGT 60.661 50.000 20.43 3.19 0.00 2.83
1913 6201 1.937196 GCACGCGCTGCAGAATTTTG 61.937 55.000 20.43 8.11 46.29 2.44
1914 6202 1.730547 GCACGCGCTGCAGAATTTT 60.731 52.632 20.43 0.00 46.29 1.82
1915 6203 2.126734 GCACGCGCTGCAGAATTT 60.127 55.556 20.43 0.00 46.29 1.82
1923 6211 2.887568 CTTCCTAGGCACGCGCTG 60.888 66.667 5.73 5.02 38.60 5.18
1924 6212 3.068691 TCTTCCTAGGCACGCGCT 61.069 61.111 5.73 0.00 38.60 5.92
1925 6213 2.583593 CTCTTCCTAGGCACGCGC 60.584 66.667 5.73 0.00 37.44 6.86
1926 6214 1.945354 TTCCTCTTCCTAGGCACGCG 61.945 60.000 3.53 3.53 36.51 6.01
1927 6215 0.460459 GTTCCTCTTCCTAGGCACGC 60.460 60.000 2.96 0.00 36.51 5.34
1928 6216 0.179134 CGTTCCTCTTCCTAGGCACG 60.179 60.000 2.96 0.96 46.84 5.34
1929 6217 0.175989 CCGTTCCTCTTCCTAGGCAC 59.824 60.000 2.96 0.00 36.51 5.01
1930 6218 0.976073 CCCGTTCCTCTTCCTAGGCA 60.976 60.000 2.96 0.00 36.51 4.75
1931 6219 0.686769 TCCCGTTCCTCTTCCTAGGC 60.687 60.000 2.96 0.00 36.51 3.93
1932 6220 1.689273 CATCCCGTTCCTCTTCCTAGG 59.311 57.143 0.82 0.82 38.06 3.02
1933 6221 1.069358 GCATCCCGTTCCTCTTCCTAG 59.931 57.143 0.00 0.00 0.00 3.02
1934 6222 1.120530 GCATCCCGTTCCTCTTCCTA 58.879 55.000 0.00 0.00 0.00 2.94
1935 6223 0.618968 AGCATCCCGTTCCTCTTCCT 60.619 55.000 0.00 0.00 0.00 3.36
1936 6224 0.462759 CAGCATCCCGTTCCTCTTCC 60.463 60.000 0.00 0.00 0.00 3.46
1937 6225 1.092345 GCAGCATCCCGTTCCTCTTC 61.092 60.000 0.00 0.00 0.00 2.87
1938 6226 1.078143 GCAGCATCCCGTTCCTCTT 60.078 57.895 0.00 0.00 0.00 2.85
1939 6227 2.586792 GCAGCATCCCGTTCCTCT 59.413 61.111 0.00 0.00 0.00 3.69
1940 6228 2.892425 CGCAGCATCCCGTTCCTC 60.892 66.667 0.00 0.00 0.00 3.71
1941 6229 4.473520 CCGCAGCATCCCGTTCCT 62.474 66.667 0.00 0.00 0.00 3.36
1949 6237 4.819761 TCACGGAGCCGCAGCATC 62.820 66.667 9.14 0.00 43.56 3.91
1970 6258 3.636313 TAGAAAGCACCCGTCGCCG 62.636 63.158 0.00 0.00 0.00 6.46
1971 6259 1.810030 CTAGAAAGCACCCGTCGCC 60.810 63.158 0.00 0.00 0.00 5.54
1972 6260 3.782042 CTAGAAAGCACCCGTCGC 58.218 61.111 0.00 0.00 0.00 5.19
1982 6270 3.057596 CGATCCAGGAGCTAGCTAGAAAG 60.058 52.174 25.15 6.07 0.00 2.62
1983 6271 2.887783 CGATCCAGGAGCTAGCTAGAAA 59.112 50.000 25.15 2.87 0.00 2.52
1984 6272 2.106684 TCGATCCAGGAGCTAGCTAGAA 59.893 50.000 25.15 2.09 0.00 2.10
1985 6273 1.700186 TCGATCCAGGAGCTAGCTAGA 59.300 52.381 25.15 12.63 0.00 2.43
1986 6274 2.192664 TCGATCCAGGAGCTAGCTAG 57.807 55.000 19.38 16.84 0.00 3.42
1987 6275 2.717390 GATCGATCCAGGAGCTAGCTA 58.283 52.381 19.38 0.97 0.00 3.32
1988 6276 1.544724 GATCGATCCAGGAGCTAGCT 58.455 55.000 19.45 19.45 0.00 3.32
1989 6277 0.170116 CGATCGATCCAGGAGCTAGC 59.830 60.000 19.51 6.62 0.00 3.42
1990 6278 1.814793 TCGATCGATCCAGGAGCTAG 58.185 55.000 19.51 2.52 0.00 3.42
1991 6279 2.498644 ATCGATCGATCCAGGAGCTA 57.501 50.000 24.60 0.00 0.00 3.32
1992 6280 1.626686 AATCGATCGATCCAGGAGCT 58.373 50.000 29.48 9.84 33.08 4.09
1993 6281 2.733858 GCTAATCGATCGATCCAGGAGC 60.734 54.545 29.48 24.88 33.08 4.70
1994 6282 2.752354 AGCTAATCGATCGATCCAGGAG 59.248 50.000 29.48 20.47 33.08 3.69
1995 6283 2.796557 AGCTAATCGATCGATCCAGGA 58.203 47.619 29.48 11.46 33.08 3.86
1996 6284 3.488384 GCTAGCTAATCGATCGATCCAGG 60.488 52.174 29.48 19.24 33.08 4.45
1997 6285 3.376859 AGCTAGCTAATCGATCGATCCAG 59.623 47.826 29.48 26.66 33.08 3.86
1998 6286 3.348119 AGCTAGCTAATCGATCGATCCA 58.652 45.455 29.48 19.12 33.08 3.41
1999 6287 4.812091 TCTAGCTAGCTAATCGATCGATCC 59.188 45.833 29.48 19.89 33.08 3.36
2000 6288 5.977171 TCTAGCTAGCTAATCGATCGATC 57.023 43.478 29.48 17.71 33.08 3.69
2001 6289 6.147164 GCTATCTAGCTAGCTAATCGATCGAT 59.853 42.308 24.60 24.60 45.62 3.59
2002 6290 5.464057 GCTATCTAGCTAGCTAATCGATCGA 59.536 44.000 24.20 21.86 45.62 3.59
2003 6291 5.675970 GCTATCTAGCTAGCTAATCGATCG 58.324 45.833 24.20 18.55 45.62 3.69
2018 6306 5.499139 GAATCGATCCAGGAGCTATCTAG 57.501 47.826 2.51 0.00 0.00 2.43
2032 6320 1.429148 GCACCGGTGTGGAATCGATC 61.429 60.000 33.92 10.94 42.99 3.69
2033 6321 1.449601 GCACCGGTGTGGAATCGAT 60.450 57.895 33.92 0.00 42.99 3.59
2034 6322 1.252215 TAGCACCGGTGTGGAATCGA 61.252 55.000 33.92 11.15 42.99 3.59
2035 6323 0.806102 CTAGCACCGGTGTGGAATCG 60.806 60.000 33.92 12.98 42.99 3.34
2036 6324 1.090052 GCTAGCACCGGTGTGGAATC 61.090 60.000 33.92 17.24 42.99 2.52
2037 6325 1.078426 GCTAGCACCGGTGTGGAAT 60.078 57.895 33.92 17.75 42.99 3.01
2038 6326 0.901114 TAGCTAGCACCGGTGTGGAA 60.901 55.000 33.92 16.60 42.99 3.53
2039 6327 1.304630 TAGCTAGCACCGGTGTGGA 60.305 57.895 33.92 18.87 42.99 4.02
2040 6328 1.141881 CTAGCTAGCACCGGTGTGG 59.858 63.158 33.92 23.64 42.99 4.17
2041 6329 4.814900 CTAGCTAGCACCGGTGTG 57.185 61.111 33.92 24.09 45.65 3.82
2051 6339 4.943705 TGAATTGGTCCAAAAGCTAGCTAG 59.056 41.667 19.70 16.84 0.00 3.42
2052 6340 4.917385 TGAATTGGTCCAAAAGCTAGCTA 58.083 39.130 19.70 0.00 0.00 3.32
2053 6341 3.766545 TGAATTGGTCCAAAAGCTAGCT 58.233 40.909 12.68 12.68 0.00 3.32
2054 6342 4.488879 CTTGAATTGGTCCAAAAGCTAGC 58.511 43.478 8.75 6.62 0.00 3.42
2055 6343 4.022068 TGCTTGAATTGGTCCAAAAGCTAG 60.022 41.667 27.82 18.14 36.37 3.42
2056 6344 3.894427 TGCTTGAATTGGTCCAAAAGCTA 59.106 39.130 27.82 17.49 36.37 3.32
2057 6345 2.699846 TGCTTGAATTGGTCCAAAAGCT 59.300 40.909 27.82 9.05 36.37 3.74
2058 6346 3.062042 CTGCTTGAATTGGTCCAAAAGC 58.938 45.455 23.94 23.94 36.12 3.51
2059 6347 3.062042 GCTGCTTGAATTGGTCCAAAAG 58.938 45.455 8.75 9.13 0.00 2.27
2060 6348 2.545532 CGCTGCTTGAATTGGTCCAAAA 60.546 45.455 8.75 0.00 0.00 2.44
2061 6349 1.000385 CGCTGCTTGAATTGGTCCAAA 60.000 47.619 8.75 0.00 0.00 3.28
2062 6350 0.597568 CGCTGCTTGAATTGGTCCAA 59.402 50.000 6.80 6.80 0.00 3.53
2063 6351 0.250684 TCGCTGCTTGAATTGGTCCA 60.251 50.000 0.00 0.00 0.00 4.02
2064 6352 0.169009 GTCGCTGCTTGAATTGGTCC 59.831 55.000 0.00 0.00 0.00 4.46
2065 6353 0.179215 CGTCGCTGCTTGAATTGGTC 60.179 55.000 0.00 0.00 0.00 4.02
2066 6354 0.602638 TCGTCGCTGCTTGAATTGGT 60.603 50.000 0.00 0.00 0.00 3.67
2067 6355 0.179215 GTCGTCGCTGCTTGAATTGG 60.179 55.000 0.00 0.00 0.00 3.16
2068 6356 0.517132 CGTCGTCGCTGCTTGAATTG 60.517 55.000 0.00 0.00 0.00 2.32
2069 6357 0.666274 TCGTCGTCGCTGCTTGAATT 60.666 50.000 0.00 0.00 36.96 2.17
2070 6358 1.073216 CTCGTCGTCGCTGCTTGAAT 61.073 55.000 0.00 0.00 36.96 2.57
2071 6359 1.729484 CTCGTCGTCGCTGCTTGAA 60.729 57.895 0.00 0.00 36.96 2.69
2072 6360 2.126850 CTCGTCGTCGCTGCTTGA 60.127 61.111 0.00 0.00 36.96 3.02
2073 6361 3.175240 CCTCGTCGTCGCTGCTTG 61.175 66.667 0.00 0.00 36.96 4.01
2074 6362 4.421479 CCCTCGTCGTCGCTGCTT 62.421 66.667 0.00 0.00 36.96 3.91
2104 6392 2.413437 CTAGGATGGCTCGCACGAGG 62.413 65.000 20.56 3.99 42.19 4.63
2105 6393 1.007964 CTAGGATGGCTCGCACGAG 60.008 63.158 15.50 15.50 44.56 4.18
2106 6394 2.490148 CCTAGGATGGCTCGCACGA 61.490 63.158 1.05 0.00 0.00 4.35
2107 6395 2.028190 CCTAGGATGGCTCGCACG 59.972 66.667 1.05 0.00 0.00 5.34
2115 6403 2.028190 CGCTGACGCCTAGGATGG 59.972 66.667 14.75 2.88 0.00 3.51
2116 6404 2.028190 CCGCTGACGCCTAGGATG 59.972 66.667 14.75 6.42 38.22 3.51
2117 6405 3.917760 GCCGCTGACGCCTAGGAT 61.918 66.667 14.75 0.00 38.22 3.24
2125 6413 1.632046 AAAATACGGTGCCGCTGACG 61.632 55.000 10.87 0.00 44.19 4.35
2126 6414 0.179200 CAAAATACGGTGCCGCTGAC 60.179 55.000 10.87 0.00 44.19 3.51
2127 6415 1.917782 GCAAAATACGGTGCCGCTGA 61.918 55.000 10.87 0.00 44.19 4.26
2128 6416 1.514014 GCAAAATACGGTGCCGCTG 60.514 57.895 10.87 2.29 44.19 5.18
2129 6417 2.874751 GCAAAATACGGTGCCGCT 59.125 55.556 10.87 1.06 44.19 5.52
2133 6421 0.388006 AAAGCGGCAAAATACGGTGC 60.388 50.000 1.45 0.00 40.99 5.01
2134 6422 1.335506 ACAAAGCGGCAAAATACGGTG 60.336 47.619 1.45 0.00 40.99 4.94
2135 6423 0.955905 ACAAAGCGGCAAAATACGGT 59.044 45.000 1.45 0.00 43.21 4.83
2136 6424 1.335935 CACAAAGCGGCAAAATACGG 58.664 50.000 1.45 0.00 0.00 4.02
2137 6425 0.707822 GCACAAAGCGGCAAAATACG 59.292 50.000 1.45 0.00 0.00 3.06
2148 6436 4.389576 CCGGACAGCGCACAAAGC 62.390 66.667 11.47 0.00 40.87 3.51
2149 6437 3.726517 CCCGGACAGCGCACAAAG 61.727 66.667 11.47 0.00 0.00 2.77
2158 6446 3.072468 TACGAAGCCCCCGGACAG 61.072 66.667 0.73 0.00 0.00 3.51
2159 6447 3.072468 CTACGAAGCCCCCGGACA 61.072 66.667 0.73 0.00 0.00 4.02
2160 6448 3.846430 CCTACGAAGCCCCCGGAC 61.846 72.222 0.73 0.00 0.00 4.79
2161 6449 4.064768 TCCTACGAAGCCCCCGGA 62.065 66.667 0.73 0.00 0.00 5.14
2162 6450 3.537874 CTCCTACGAAGCCCCCGG 61.538 72.222 0.00 0.00 0.00 5.73
2163 6451 4.222847 GCTCCTACGAAGCCCCCG 62.223 72.222 0.00 0.00 33.53 5.73
2164 6452 4.222847 CGCTCCTACGAAGCCCCC 62.223 72.222 0.00 0.00 36.36 5.40
2165 6453 2.718073 TTCGCTCCTACGAAGCCCC 61.718 63.158 0.00 0.00 46.39 5.80
2166 6454 2.890371 TTCGCTCCTACGAAGCCC 59.110 61.111 0.00 0.00 46.39 5.19
2171 6459 1.015109 CAGCTAGTTCGCTCCTACGA 58.985 55.000 0.00 0.00 38.41 3.43
2172 6460 0.029567 CCAGCTAGTTCGCTCCTACG 59.970 60.000 0.00 0.00 38.41 3.51
2173 6461 0.249114 GCCAGCTAGTTCGCTCCTAC 60.249 60.000 0.00 0.00 38.41 3.18
2174 6462 1.392710 GGCCAGCTAGTTCGCTCCTA 61.393 60.000 0.00 0.00 38.41 2.94
2175 6463 2.726351 GGCCAGCTAGTTCGCTCCT 61.726 63.158 0.00 0.00 38.41 3.69
2176 6464 2.202946 GGCCAGCTAGTTCGCTCC 60.203 66.667 0.00 0.00 38.41 4.70
2177 6465 2.583593 CGGCCAGCTAGTTCGCTC 60.584 66.667 2.24 0.00 38.41 5.03
2178 6466 3.382832 ACGGCCAGCTAGTTCGCT 61.383 61.111 2.24 0.00 41.90 4.93
2179 6467 3.188786 CACGGCCAGCTAGTTCGC 61.189 66.667 2.24 0.00 0.00 4.70
2180 6468 2.509336 CCACGGCCAGCTAGTTCG 60.509 66.667 2.24 0.00 0.00 3.95
2181 6469 1.448013 GTCCACGGCCAGCTAGTTC 60.448 63.158 2.24 0.00 0.00 3.01
2182 6470 2.214216 TGTCCACGGCCAGCTAGTT 61.214 57.895 2.24 0.00 0.00 2.24
2183 6471 2.603473 TGTCCACGGCCAGCTAGT 60.603 61.111 2.24 0.00 0.00 2.57
2184 6472 2.125512 GTGTCCACGGCCAGCTAG 60.126 66.667 2.24 0.00 0.00 3.42
2194 6482 3.454375 TCTTTTTCTCACTCGTGTCCAC 58.546 45.455 0.00 0.00 0.00 4.02
2195 6483 3.812156 TCTTTTTCTCACTCGTGTCCA 57.188 42.857 0.00 0.00 0.00 4.02
2196 6484 4.369182 TCTTCTTTTTCTCACTCGTGTCC 58.631 43.478 0.00 0.00 0.00 4.02
2197 6485 5.749109 TCTTCTTCTTTTTCTCACTCGTGTC 59.251 40.000 0.00 0.00 0.00 3.67
2198 6486 5.661458 TCTTCTTCTTTTTCTCACTCGTGT 58.339 37.500 0.00 0.00 0.00 4.49
2199 6487 6.256757 ACTTCTTCTTCTTTTTCTCACTCGTG 59.743 38.462 0.00 0.00 0.00 4.35
2200 6488 6.256757 CACTTCTTCTTCTTTTTCTCACTCGT 59.743 38.462 0.00 0.00 0.00 4.18
2201 6489 6.292596 CCACTTCTTCTTCTTTTTCTCACTCG 60.293 42.308 0.00 0.00 0.00 4.18
2202 6490 6.017523 CCCACTTCTTCTTCTTTTTCTCACTC 60.018 42.308 0.00 0.00 0.00 3.51
2203 6491 5.825151 CCCACTTCTTCTTCTTTTTCTCACT 59.175 40.000 0.00 0.00 0.00 3.41
2204 6492 5.823045 TCCCACTTCTTCTTCTTTTTCTCAC 59.177 40.000 0.00 0.00 0.00 3.51
2205 6493 6.001449 TCCCACTTCTTCTTCTTTTTCTCA 57.999 37.500 0.00 0.00 0.00 3.27
2206 6494 6.944234 TTCCCACTTCTTCTTCTTTTTCTC 57.056 37.500 0.00 0.00 0.00 2.87
2207 6495 7.119387 TCTTTCCCACTTCTTCTTCTTTTTCT 58.881 34.615 0.00 0.00 0.00 2.52
2208 6496 7.334844 TCTTTCCCACTTCTTCTTCTTTTTC 57.665 36.000 0.00 0.00 0.00 2.29
2209 6497 7.718334 TTCTTTCCCACTTCTTCTTCTTTTT 57.282 32.000 0.00 0.00 0.00 1.94
2210 6498 7.904558 ATTCTTTCCCACTTCTTCTTCTTTT 57.095 32.000 0.00 0.00 0.00 2.27
2212 6500 9.674068 GTATATTCTTTCCCACTTCTTCTTCTT 57.326 33.333 0.00 0.00 0.00 2.52
2213 6501 7.982354 CGTATATTCTTTCCCACTTCTTCTTCT 59.018 37.037 0.00 0.00 0.00 2.85
2214 6502 7.254488 GCGTATATTCTTTCCCACTTCTTCTTC 60.254 40.741 0.00 0.00 0.00 2.87
2215 6503 6.539103 GCGTATATTCTTTCCCACTTCTTCTT 59.461 38.462 0.00 0.00 0.00 2.52
2216 6504 6.049790 GCGTATATTCTTTCCCACTTCTTCT 58.950 40.000 0.00 0.00 0.00 2.85
2217 6505 5.050972 CGCGTATATTCTTTCCCACTTCTTC 60.051 44.000 0.00 0.00 0.00 2.87
2218 6506 4.809426 CGCGTATATTCTTTCCCACTTCTT 59.191 41.667 0.00 0.00 0.00 2.52
2219 6507 4.098960 TCGCGTATATTCTTTCCCACTTCT 59.901 41.667 5.77 0.00 0.00 2.85
2220 6508 4.365723 TCGCGTATATTCTTTCCCACTTC 58.634 43.478 5.77 0.00 0.00 3.01
2221 6509 4.395959 TCGCGTATATTCTTTCCCACTT 57.604 40.909 5.77 0.00 0.00 3.16
2222 6510 4.395959 TTCGCGTATATTCTTTCCCACT 57.604 40.909 5.77 0.00 0.00 4.00
2223 6511 6.963049 ATATTCGCGTATATTCTTTCCCAC 57.037 37.500 11.92 0.00 0.00 4.61
2224 6512 7.604549 TGTATATTCGCGTATATTCTTTCCCA 58.395 34.615 21.03 0.78 0.00 4.37
2225 6513 7.758528 ACTGTATATTCGCGTATATTCTTTCCC 59.241 37.037 21.03 4.73 0.00 3.97
2226 6514 8.684973 ACTGTATATTCGCGTATATTCTTTCC 57.315 34.615 21.03 6.10 0.00 3.13
2255 6543 9.863845 GAGCTCACTCTTTAAACTTAAGACTAT 57.136 33.333 9.40 0.00 40.03 2.12
2256 6544 8.021973 CGAGCTCACTCTTTAAACTTAAGACTA 58.978 37.037 15.40 0.00 41.09 2.59
2257 6545 6.864165 CGAGCTCACTCTTTAAACTTAAGACT 59.136 38.462 15.40 0.00 41.09 3.24
2258 6546 6.089685 CCGAGCTCACTCTTTAAACTTAAGAC 59.910 42.308 15.40 0.00 41.09 3.01
2259 6547 6.157211 CCGAGCTCACTCTTTAAACTTAAGA 58.843 40.000 15.40 0.00 41.09 2.10
2260 6548 5.927115 ACCGAGCTCACTCTTTAAACTTAAG 59.073 40.000 15.40 0.00 41.09 1.85
2261 6549 5.850614 ACCGAGCTCACTCTTTAAACTTAA 58.149 37.500 15.40 0.00 41.09 1.85
2262 6550 5.010314 TGACCGAGCTCACTCTTTAAACTTA 59.990 40.000 15.40 0.00 41.09 2.24
2263 6551 4.202223 TGACCGAGCTCACTCTTTAAACTT 60.202 41.667 15.40 0.00 41.09 2.66
2264 6552 3.321111 TGACCGAGCTCACTCTTTAAACT 59.679 43.478 15.40 0.00 41.09 2.66
2265 6553 3.429207 GTGACCGAGCTCACTCTTTAAAC 59.571 47.826 15.40 0.00 41.09 2.01
2266 6554 3.069016 TGTGACCGAGCTCACTCTTTAAA 59.931 43.478 15.40 0.00 41.15 1.52
2267 6555 2.626266 TGTGACCGAGCTCACTCTTTAA 59.374 45.455 15.40 0.00 41.15 1.52
2268 6556 2.229062 CTGTGACCGAGCTCACTCTTTA 59.771 50.000 15.40 0.00 41.15 1.85
2269 6557 1.000283 CTGTGACCGAGCTCACTCTTT 60.000 52.381 15.40 0.00 41.15 2.52
2270 6558 0.600557 CTGTGACCGAGCTCACTCTT 59.399 55.000 15.40 0.00 41.15 2.85
2271 6559 1.872197 GCTGTGACCGAGCTCACTCT 61.872 60.000 15.40 0.00 41.15 3.24
2272 6560 1.445238 GCTGTGACCGAGCTCACTC 60.445 63.158 15.40 7.59 41.15 3.51
2273 6561 2.653702 GCTGTGACCGAGCTCACT 59.346 61.111 15.40 0.00 41.15 3.41
2274 6562 2.433318 GGCTGTGACCGAGCTCAC 60.433 66.667 15.40 5.67 40.98 3.51
2275 6563 3.695606 GGGCTGTGACCGAGCTCA 61.696 66.667 15.40 0.00 36.87 4.26
2276 6564 2.731691 TTTGGGCTGTGACCGAGCTC 62.732 60.000 2.73 2.73 37.45 4.09
2277 6565 2.818169 TTTGGGCTGTGACCGAGCT 61.818 57.895 0.00 0.00 36.63 4.09
2278 6566 2.281484 TTTGGGCTGTGACCGAGC 60.281 61.111 0.00 0.00 29.56 5.03
2279 6567 1.966451 GGTTTGGGCTGTGACCGAG 60.966 63.158 0.00 0.00 29.56 4.63
2280 6568 2.112297 GGTTTGGGCTGTGACCGA 59.888 61.111 0.00 0.00 29.56 4.69
2281 6569 1.826054 TTGGTTTGGGCTGTGACCG 60.826 57.895 0.00 0.00 34.90 4.79
2282 6570 0.755327 AGTTGGTTTGGGCTGTGACC 60.755 55.000 0.00 0.00 0.00 4.02
2283 6571 0.668535 GAGTTGGTTTGGGCTGTGAC 59.331 55.000 0.00 0.00 0.00 3.67
2284 6572 0.550914 AGAGTTGGTTTGGGCTGTGA 59.449 50.000 0.00 0.00 0.00 3.58
2285 6573 1.338020 GAAGAGTTGGTTTGGGCTGTG 59.662 52.381 0.00 0.00 0.00 3.66
2286 6574 1.064017 TGAAGAGTTGGTTTGGGCTGT 60.064 47.619 0.00 0.00 0.00 4.40
2287 6575 1.691196 TGAAGAGTTGGTTTGGGCTG 58.309 50.000 0.00 0.00 0.00 4.85
2288 6576 2.452600 TTGAAGAGTTGGTTTGGGCT 57.547 45.000 0.00 0.00 0.00 5.19
2289 6577 3.181466 ACATTTGAAGAGTTGGTTTGGGC 60.181 43.478 0.00 0.00 0.00 5.36
2290 6578 4.370917 CACATTTGAAGAGTTGGTTTGGG 58.629 43.478 0.00 0.00 0.00 4.12
2291 6579 3.803778 GCACATTTGAAGAGTTGGTTTGG 59.196 43.478 0.00 0.00 0.00 3.28
2292 6580 4.685924 AGCACATTTGAAGAGTTGGTTTG 58.314 39.130 0.00 0.00 0.00 2.93
2293 6581 5.343307 AAGCACATTTGAAGAGTTGGTTT 57.657 34.783 0.00 0.00 0.00 3.27
2294 6582 5.343307 AAAGCACATTTGAAGAGTTGGTT 57.657 34.783 0.00 0.00 0.00 3.67
2295 6583 4.202151 GGAAAGCACATTTGAAGAGTTGGT 60.202 41.667 0.00 0.00 0.00 3.67
2296 6584 4.301628 GGAAAGCACATTTGAAGAGTTGG 58.698 43.478 0.00 0.00 0.00 3.77
2297 6585 4.202141 TGGGAAAGCACATTTGAAGAGTTG 60.202 41.667 0.00 0.00 0.00 3.16
2298 6586 3.960102 TGGGAAAGCACATTTGAAGAGTT 59.040 39.130 0.00 0.00 0.00 3.01
2299 6587 3.565307 TGGGAAAGCACATTTGAAGAGT 58.435 40.909 0.00 0.00 0.00 3.24
2300 6588 3.571401 ACTGGGAAAGCACATTTGAAGAG 59.429 43.478 0.00 0.00 0.00 2.85
2301 6589 3.565307 ACTGGGAAAGCACATTTGAAGA 58.435 40.909 0.00 0.00 0.00 2.87
2302 6590 3.571401 AGACTGGGAAAGCACATTTGAAG 59.429 43.478 0.00 0.00 0.00 3.02
2303 6591 3.565307 AGACTGGGAAAGCACATTTGAA 58.435 40.909 0.00 0.00 0.00 2.69
2304 6592 3.149196 GAGACTGGGAAAGCACATTTGA 58.851 45.455 0.00 0.00 0.00 2.69
2305 6593 2.095567 CGAGACTGGGAAAGCACATTTG 60.096 50.000 0.00 0.00 0.00 2.32
2306 6594 2.154462 CGAGACTGGGAAAGCACATTT 58.846 47.619 0.00 0.00 0.00 2.32
2307 6595 1.813513 CGAGACTGGGAAAGCACATT 58.186 50.000 0.00 0.00 0.00 2.71
2308 6596 0.674895 GCGAGACTGGGAAAGCACAT 60.675 55.000 0.00 0.00 0.00 3.21
2309 6597 1.301716 GCGAGACTGGGAAAGCACA 60.302 57.895 0.00 0.00 0.00 4.57
2310 6598 2.383527 CGCGAGACTGGGAAAGCAC 61.384 63.158 0.00 0.00 0.00 4.40
2311 6599 1.888436 ATCGCGAGACTGGGAAAGCA 61.888 55.000 16.66 0.00 46.97 3.91
2312 6600 0.741221 AATCGCGAGACTGGGAAAGC 60.741 55.000 16.66 0.00 46.97 3.51
2313 6601 1.726853 AAATCGCGAGACTGGGAAAG 58.273 50.000 16.66 0.00 46.97 2.62
2314 6602 3.259064 CTTAAATCGCGAGACTGGGAAA 58.741 45.455 16.66 0.00 46.97 3.13
2315 6603 2.418197 CCTTAAATCGCGAGACTGGGAA 60.418 50.000 16.66 0.73 46.97 3.97
2316 6604 1.136305 CCTTAAATCGCGAGACTGGGA 59.864 52.381 16.66 0.00 46.97 4.37
2317 6605 1.571919 CCTTAAATCGCGAGACTGGG 58.428 55.000 16.66 10.27 46.97 4.45
2318 6606 1.571919 CCCTTAAATCGCGAGACTGG 58.428 55.000 16.66 12.48 46.97 4.00
2319 6607 1.134788 ACCCCTTAAATCGCGAGACTG 60.135 52.381 16.66 3.43 46.97 3.51
2320 6608 1.136500 GACCCCTTAAATCGCGAGACT 59.864 52.381 16.66 3.57 46.97 3.24
2321 6609 1.136500 AGACCCCTTAAATCGCGAGAC 59.864 52.381 16.66 0.00 46.97 3.36
2323 6611 1.571919 CAGACCCCTTAAATCGCGAG 58.428 55.000 16.66 0.00 0.00 5.03
2324 6612 0.461339 GCAGACCCCTTAAATCGCGA 60.461 55.000 13.09 13.09 0.00 5.87
2325 6613 0.462047 AGCAGACCCCTTAAATCGCG 60.462 55.000 0.00 0.00 0.00 5.87
2326 6614 2.102588 TCTAGCAGACCCCTTAAATCGC 59.897 50.000 0.00 0.00 0.00 4.58
2327 6615 3.637229 TCTCTAGCAGACCCCTTAAATCG 59.363 47.826 0.00 0.00 0.00 3.34
2328 6616 5.546526 CATCTCTAGCAGACCCCTTAAATC 58.453 45.833 0.00 0.00 32.26 2.17
2329 6617 4.202409 GCATCTCTAGCAGACCCCTTAAAT 60.202 45.833 0.00 0.00 32.26 1.40
2330 6618 3.134804 GCATCTCTAGCAGACCCCTTAAA 59.865 47.826 0.00 0.00 32.26 1.52
2331 6619 2.700897 GCATCTCTAGCAGACCCCTTAA 59.299 50.000 0.00 0.00 32.26 1.85
2332 6620 2.091055 AGCATCTCTAGCAGACCCCTTA 60.091 50.000 0.00 0.00 32.26 2.69
2333 6621 1.127343 GCATCTCTAGCAGACCCCTT 58.873 55.000 0.00 0.00 32.26 3.95
2334 6622 0.264359 AGCATCTCTAGCAGACCCCT 59.736 55.000 0.00 0.00 32.26 4.79
2335 6623 0.678950 GAGCATCTCTAGCAGACCCC 59.321 60.000 0.00 0.00 32.26 4.95


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.