Multiple sequence alignment - TraesCS2B01G280200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G280200 chr2B 100.000 5125 0 0 1 5125 386317472 386312348 0.000000e+00 9465.0
1 TraesCS2B01G280200 chr2B 83.871 62 10 0 4725 4786 351749145 351749206 5.540000e-05 60.2
2 TraesCS2B01G280200 chr2D 95.463 3747 97 21 777 4493 318340503 318336800 0.000000e+00 5910.0
3 TraesCS2B01G280200 chr2D 93.994 716 30 9 1 713 318353289 318352584 0.000000e+00 1072.0
4 TraesCS2B01G280200 chr2D 94.541 458 17 3 4673 5125 318336723 318336269 0.000000e+00 701.0
5 TraesCS2B01G280200 chr2D 77.530 1077 229 9 2846 3911 621559508 621558434 2.010000e-178 636.0
6 TraesCS2B01G280200 chr2D 91.429 105 3 3 4484 4583 179354469 179354572 6.920000e-29 139.0
7 TraesCS2B01G280200 chr2D 91.346 104 3 3 4485 4583 67559330 67559228 2.490000e-28 137.0
8 TraesCS2B01G280200 chr2D 97.403 77 2 0 730 806 318340584 318340508 1.160000e-26 132.0
9 TraesCS2B01G280200 chr2D 91.954 87 6 1 2068 2154 425742654 425742569 2.510000e-23 121.0
10 TraesCS2B01G280200 chr2D 97.297 37 1 0 4580 4616 318336803 318336767 4.280000e-06 63.9
11 TraesCS2B01G280200 chr2A 97.741 1859 38 3 2638 4493 413323796 413325653 0.000000e+00 3197.0
12 TraesCS2B01G280200 chr2A 93.389 1785 57 18 888 2644 413321965 413323716 0.000000e+00 2586.0
13 TraesCS2B01G280200 chr2A 93.617 611 34 2 1176 1781 293051507 293052117 0.000000e+00 907.0
14 TraesCS2B01G280200 chr2A 90.353 539 45 6 4579 5116 413325649 413326181 0.000000e+00 701.0
15 TraesCS2B01G280200 chr2A 89.259 270 16 8 489 757 413321505 413321762 4.950000e-85 326.0
16 TraesCS2B01G280200 chr5D 94.910 609 26 3 1178 1782 84787593 84788200 0.000000e+00 948.0
17 TraesCS2B01G280200 chr5D 93.000 100 4 2 4489 4585 107561837 107561936 5.350000e-30 143.0
18 TraesCS2B01G280200 chr7B 93.268 609 38 1 1176 1781 454620944 454620336 0.000000e+00 894.0
19 TraesCS2B01G280200 chr7B 92.787 610 38 2 1176 1781 362412992 362412385 0.000000e+00 878.0
20 TraesCS2B01G280200 chr7B 91.667 84 7 0 2072 2155 198938430 198938347 3.240000e-22 117.0
21 TraesCS2B01G280200 chr1A 92.611 609 42 1 1176 1781 534668991 534668383 0.000000e+00 872.0
22 TraesCS2B01G280200 chr1A 95.181 83 4 0 2072 2154 567970007 567969925 1.160000e-26 132.0
23 TraesCS2B01G280200 chr3B 92.447 609 43 1 1176 1781 503717514 503718122 0.000000e+00 867.0
24 TraesCS2B01G280200 chr5A 92.295 610 43 2 1176 1781 37179472 37178863 0.000000e+00 863.0
25 TraesCS2B01G280200 chr5A 76.122 1047 224 20 2877 3906 622782251 622781214 4.550000e-145 525.0
26 TraesCS2B01G280200 chr1B 90.909 110 4 3 4484 4588 132296906 132296798 5.350000e-30 143.0
27 TraesCS2B01G280200 chr1B 96.386 83 3 0 2072 2154 658497511 658497429 2.490000e-28 137.0
28 TraesCS2B01G280200 chr1B 93.258 89 4 2 2068 2154 470003262 470003174 4.160000e-26 130.0
29 TraesCS2B01G280200 chr3D 91.346 104 4 2 4489 4587 79532553 79532656 2.490000e-28 137.0
30 TraesCS2B01G280200 chr4B 89.189 111 6 2 4476 4580 250706903 250707013 3.220000e-27 134.0
31 TraesCS2B01G280200 chr4B 91.765 85 6 1 2072 2155 486282365 486282281 3.240000e-22 117.0
32 TraesCS2B01G280200 chr6A 88.034 117 7 7 4477 4588 19879017 19879131 1.160000e-26 132.0
33 TraesCS2B01G280200 chr4A 89.091 110 6 3 4489 4593 653333684 653333576 1.160000e-26 132.0
34 TraesCS2B01G280200 chr7D 87.288 118 9 3 4469 4581 180531488 180531372 4.160000e-26 130.0
35 TraesCS2B01G280200 chr1D 91.667 84 7 0 2072 2155 279101378 279101461 3.240000e-22 117.0
36 TraesCS2B01G280200 chr1D 89.888 89 7 2 2068 2155 22976619 22976532 4.190000e-21 113.0
37 TraesCS2B01G280200 chr3A 90.000 90 8 1 2065 2154 599793015 599793103 1.170000e-21 115.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G280200 chr2B 386312348 386317472 5124 True 9465.000 9465 100.0000 1 5125 1 chr2B.!!$R1 5124
1 TraesCS2B01G280200 chr2D 318336269 318340584 4315 True 1701.725 5910 96.1760 730 5125 4 chr2D.!!$R5 4395
2 TraesCS2B01G280200 chr2D 318352584 318353289 705 True 1072.000 1072 93.9940 1 713 1 chr2D.!!$R2 712
3 TraesCS2B01G280200 chr2D 621558434 621559508 1074 True 636.000 636 77.5300 2846 3911 1 chr2D.!!$R4 1065
4 TraesCS2B01G280200 chr2A 413321505 413326181 4676 False 1702.500 3197 92.6855 489 5116 4 chr2A.!!$F2 4627
5 TraesCS2B01G280200 chr2A 293051507 293052117 610 False 907.000 907 93.6170 1176 1781 1 chr2A.!!$F1 605
6 TraesCS2B01G280200 chr5D 84787593 84788200 607 False 948.000 948 94.9100 1178 1782 1 chr5D.!!$F1 604
7 TraesCS2B01G280200 chr7B 454620336 454620944 608 True 894.000 894 93.2680 1176 1781 1 chr7B.!!$R3 605
8 TraesCS2B01G280200 chr7B 362412385 362412992 607 True 878.000 878 92.7870 1176 1781 1 chr7B.!!$R2 605
9 TraesCS2B01G280200 chr1A 534668383 534668991 608 True 872.000 872 92.6110 1176 1781 1 chr1A.!!$R1 605
10 TraesCS2B01G280200 chr3B 503717514 503718122 608 False 867.000 867 92.4470 1176 1781 1 chr3B.!!$F1 605
11 TraesCS2B01G280200 chr5A 37178863 37179472 609 True 863.000 863 92.2950 1176 1781 1 chr5A.!!$R1 605
12 TraesCS2B01G280200 chr5A 622781214 622782251 1037 True 525.000 525 76.1220 2877 3906 1 chr5A.!!$R2 1029

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
939 1070 0.109342 CCTTCCAGCTGGTTGTGACT 59.891 55.0 31.58 0.0 36.34 3.41 F
942 1073 0.546122 TCCAGCTGGTTGTGACTTGT 59.454 50.0 31.58 0.0 36.34 3.16 F
2176 2483 0.397254 GGACAGCCTAGGCCTCACTA 60.397 60.0 30.42 0.0 43.17 2.74 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2176 2483 1.402259 CGCCAGTTCAGACGATCTACT 59.598 52.381 0.0 0.0 0.00 2.57 R
2717 3192 1.945394 GACTATGTCTTCGACGGCCTA 59.055 52.381 0.0 0.0 34.95 3.93 R
4136 4620 0.321671 TCTGAAGGCGAAGGGACAAG 59.678 55.000 0.0 0.0 0.00 3.16 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
32 33 5.283457 AGGTTATCTTGAGATACACTGCC 57.717 43.478 0.28 0.40 36.81 4.85
33 34 4.101741 AGGTTATCTTGAGATACACTGCCC 59.898 45.833 0.28 0.00 36.81 5.36
34 35 4.101741 GGTTATCTTGAGATACACTGCCCT 59.898 45.833 0.28 0.00 36.81 5.19
35 36 5.293560 GTTATCTTGAGATACACTGCCCTC 58.706 45.833 0.28 0.00 36.81 4.30
36 37 2.111384 TCTTGAGATACACTGCCCTCC 58.889 52.381 0.00 0.00 0.00 4.30
37 38 1.833630 CTTGAGATACACTGCCCTCCA 59.166 52.381 0.00 0.00 0.00 3.86
38 39 1.951209 TGAGATACACTGCCCTCCAA 58.049 50.000 0.00 0.00 0.00 3.53
39 40 2.481441 TGAGATACACTGCCCTCCAAT 58.519 47.619 0.00 0.00 0.00 3.16
40 41 2.171237 TGAGATACACTGCCCTCCAATG 59.829 50.000 0.00 0.00 0.00 2.82
41 42 2.435805 GAGATACACTGCCCTCCAATGA 59.564 50.000 0.00 0.00 0.00 2.57
42 43 2.846206 AGATACACTGCCCTCCAATGAA 59.154 45.455 0.00 0.00 0.00 2.57
43 44 3.266772 AGATACACTGCCCTCCAATGAAA 59.733 43.478 0.00 0.00 0.00 2.69
44 45 2.610438 ACACTGCCCTCCAATGAAAT 57.390 45.000 0.00 0.00 0.00 2.17
45 46 2.893424 ACACTGCCCTCCAATGAAATT 58.107 42.857 0.00 0.00 36.63 1.82
46 47 4.046286 ACACTGCCCTCCAATGAAATTA 57.954 40.909 0.00 0.00 32.46 1.40
47 48 4.613437 ACACTGCCCTCCAATGAAATTAT 58.387 39.130 0.00 0.00 32.46 1.28
48 49 4.646492 ACACTGCCCTCCAATGAAATTATC 59.354 41.667 0.00 0.00 32.46 1.75
49 50 4.646040 CACTGCCCTCCAATGAAATTATCA 59.354 41.667 0.00 0.00 43.67 2.15
50 51 5.127519 CACTGCCCTCCAATGAAATTATCAA 59.872 40.000 0.00 0.00 42.54 2.57
51 52 5.721000 ACTGCCCTCCAATGAAATTATCAAA 59.279 36.000 0.00 0.00 42.54 2.69
52 53 6.127253 ACTGCCCTCCAATGAAATTATCAAAG 60.127 38.462 0.00 0.00 42.54 2.77
53 54 5.052481 GCCCTCCAATGAAATTATCAAAGC 58.948 41.667 0.00 0.00 42.54 3.51
54 55 5.163374 GCCCTCCAATGAAATTATCAAAGCT 60.163 40.000 0.00 0.00 42.54 3.74
55 56 6.040842 GCCCTCCAATGAAATTATCAAAGCTA 59.959 38.462 0.00 0.00 42.54 3.32
56 57 7.417797 GCCCTCCAATGAAATTATCAAAGCTAA 60.418 37.037 0.00 0.00 42.54 3.09
57 58 7.922811 CCCTCCAATGAAATTATCAAAGCTAAC 59.077 37.037 0.00 0.00 42.54 2.34
58 59 8.469200 CCTCCAATGAAATTATCAAAGCTAACA 58.531 33.333 0.00 0.00 42.54 2.41
59 60 9.859427 CTCCAATGAAATTATCAAAGCTAACAA 57.141 29.630 0.00 0.00 42.54 2.83
60 61 9.859427 TCCAATGAAATTATCAAAGCTAACAAG 57.141 29.630 0.00 0.00 42.54 3.16
61 62 9.643693 CCAATGAAATTATCAAAGCTAACAAGT 57.356 29.630 0.00 0.00 42.54 3.16
72 73 9.686683 ATCAAAGCTAACAAGTGATAATACCTT 57.313 29.630 0.00 0.00 0.00 3.50
92 93 7.466746 ACCTTAAATGTGTTTATGCATGAGT 57.533 32.000 10.16 0.00 30.34 3.41
93 94 7.895759 ACCTTAAATGTGTTTATGCATGAGTT 58.104 30.769 10.16 0.00 30.34 3.01
94 95 8.367156 ACCTTAAATGTGTTTATGCATGAGTTT 58.633 29.630 10.16 3.78 30.34 2.66
95 96 9.206870 CCTTAAATGTGTTTATGCATGAGTTTT 57.793 29.630 10.16 3.19 30.34 2.43
97 98 6.470557 AATGTGTTTATGCATGAGTTTTGC 57.529 33.333 10.16 0.00 40.55 3.68
98 99 5.199024 TGTGTTTATGCATGAGTTTTGCT 57.801 34.783 10.16 0.00 40.77 3.91
99 100 6.324561 TGTGTTTATGCATGAGTTTTGCTA 57.675 33.333 10.16 0.00 40.77 3.49
100 101 6.380995 TGTGTTTATGCATGAGTTTTGCTAG 58.619 36.000 10.16 0.00 40.77 3.42
101 102 5.287035 GTGTTTATGCATGAGTTTTGCTAGC 59.713 40.000 10.16 8.10 40.77 3.42
102 103 4.637483 TTATGCATGAGTTTTGCTAGCC 57.363 40.909 13.29 0.00 40.77 3.93
103 104 2.205022 TGCATGAGTTTTGCTAGCCT 57.795 45.000 13.29 0.86 40.77 4.58
104 105 1.814394 TGCATGAGTTTTGCTAGCCTG 59.186 47.619 13.29 0.00 40.77 4.85
105 106 1.133790 GCATGAGTTTTGCTAGCCTGG 59.866 52.381 13.29 0.00 37.14 4.45
106 107 2.715046 CATGAGTTTTGCTAGCCTGGA 58.285 47.619 13.29 0.00 0.00 3.86
107 108 2.949177 TGAGTTTTGCTAGCCTGGAA 57.051 45.000 13.29 0.00 0.00 3.53
108 109 3.222173 TGAGTTTTGCTAGCCTGGAAA 57.778 42.857 13.29 2.82 0.00 3.13
109 110 3.149196 TGAGTTTTGCTAGCCTGGAAAG 58.851 45.455 13.29 0.00 0.00 2.62
110 111 1.889170 AGTTTTGCTAGCCTGGAAAGC 59.111 47.619 13.29 8.04 36.77 3.51
111 112 1.613437 GTTTTGCTAGCCTGGAAAGCA 59.387 47.619 13.29 16.57 44.15 3.91
112 113 2.220653 TTTGCTAGCCTGGAAAGCAT 57.779 45.000 19.86 0.00 45.09 3.79
113 114 2.220653 TTGCTAGCCTGGAAAGCATT 57.779 45.000 19.86 0.00 45.09 3.56
114 115 3.364460 TTGCTAGCCTGGAAAGCATTA 57.636 42.857 19.86 7.39 45.09 1.90
115 116 3.582998 TGCTAGCCTGGAAAGCATTAT 57.417 42.857 13.29 0.00 41.15 1.28
116 117 3.216800 TGCTAGCCTGGAAAGCATTATG 58.783 45.455 13.29 0.00 41.15 1.90
117 118 3.217626 GCTAGCCTGGAAAGCATTATGT 58.782 45.455 2.29 0.00 36.26 2.29
118 119 4.141505 TGCTAGCCTGGAAAGCATTATGTA 60.142 41.667 13.29 0.00 41.15 2.29
119 120 5.006386 GCTAGCCTGGAAAGCATTATGTAT 58.994 41.667 2.29 0.00 36.26 2.29
120 121 5.474876 GCTAGCCTGGAAAGCATTATGTATT 59.525 40.000 2.29 0.00 36.26 1.89
121 122 5.779529 AGCCTGGAAAGCATTATGTATTG 57.220 39.130 0.00 0.00 0.00 1.90
122 123 5.203528 AGCCTGGAAAGCATTATGTATTGT 58.796 37.500 0.00 0.00 0.00 2.71
123 124 5.068198 AGCCTGGAAAGCATTATGTATTGTG 59.932 40.000 0.00 0.00 0.00 3.33
124 125 5.067674 GCCTGGAAAGCATTATGTATTGTGA 59.932 40.000 0.00 0.00 0.00 3.58
125 126 6.405731 GCCTGGAAAGCATTATGTATTGTGAA 60.406 38.462 0.00 0.00 0.00 3.18
126 127 7.198390 CCTGGAAAGCATTATGTATTGTGAAG 58.802 38.462 0.00 0.00 0.00 3.02
127 128 7.099266 TGGAAAGCATTATGTATTGTGAAGG 57.901 36.000 0.00 0.00 0.00 3.46
128 129 6.889177 TGGAAAGCATTATGTATTGTGAAGGA 59.111 34.615 0.00 0.00 0.00 3.36
129 130 7.560991 TGGAAAGCATTATGTATTGTGAAGGAT 59.439 33.333 0.00 0.00 0.00 3.24
130 131 8.078596 GGAAAGCATTATGTATTGTGAAGGATC 58.921 37.037 0.00 0.00 0.00 3.36
131 132 7.516198 AAGCATTATGTATTGTGAAGGATCC 57.484 36.000 2.48 2.48 0.00 3.36
132 133 6.604171 AGCATTATGTATTGTGAAGGATCCA 58.396 36.000 15.82 0.00 0.00 3.41
133 134 7.236529 AGCATTATGTATTGTGAAGGATCCAT 58.763 34.615 15.82 0.17 0.00 3.41
134 135 7.727186 AGCATTATGTATTGTGAAGGATCCATT 59.273 33.333 15.82 5.29 0.00 3.16
135 136 8.025445 GCATTATGTATTGTGAAGGATCCATTC 58.975 37.037 15.82 14.60 0.00 2.67
136 137 9.070179 CATTATGTATTGTGAAGGATCCATTCA 57.930 33.333 15.82 16.91 34.37 2.57
137 138 9.645128 ATTATGTATTGTGAAGGATCCATTCAA 57.355 29.630 21.09 16.54 38.34 2.69
138 139 7.578310 ATGTATTGTGAAGGATCCATTCAAG 57.422 36.000 21.09 0.00 38.34 3.02
139 140 6.720309 TGTATTGTGAAGGATCCATTCAAGA 58.280 36.000 21.09 15.25 38.34 3.02
140 141 7.348815 TGTATTGTGAAGGATCCATTCAAGAT 58.651 34.615 21.09 18.98 38.34 2.40
141 142 6.710597 ATTGTGAAGGATCCATTCAAGATG 57.289 37.500 21.09 0.00 38.34 2.90
142 143 5.183530 TGTGAAGGATCCATTCAAGATGT 57.816 39.130 21.09 0.00 38.34 3.06
143 144 5.573219 TGTGAAGGATCCATTCAAGATGTT 58.427 37.500 21.09 2.44 38.34 2.71
144 145 6.720309 TGTGAAGGATCCATTCAAGATGTTA 58.280 36.000 21.09 2.05 38.34 2.41
145 146 7.348815 TGTGAAGGATCCATTCAAGATGTTAT 58.651 34.615 21.09 0.00 38.34 1.89
146 147 7.835682 TGTGAAGGATCCATTCAAGATGTTATT 59.164 33.333 21.09 1.42 38.34 1.40
147 148 8.689972 GTGAAGGATCCATTCAAGATGTTATTT 58.310 33.333 21.09 0.84 38.34 1.40
148 149 8.906867 TGAAGGATCCATTCAAGATGTTATTTC 58.093 33.333 15.82 3.52 33.85 2.17
149 150 7.502120 AGGATCCATTCAAGATGTTATTTCG 57.498 36.000 15.82 0.00 0.00 3.46
150 151 7.056635 AGGATCCATTCAAGATGTTATTTCGT 58.943 34.615 15.82 0.00 0.00 3.85
151 152 7.012704 AGGATCCATTCAAGATGTTATTTCGTG 59.987 37.037 15.82 0.00 0.00 4.35
152 153 7.201732 GGATCCATTCAAGATGTTATTTCGTGT 60.202 37.037 6.95 0.00 0.00 4.49
153 154 7.072177 TCCATTCAAGATGTTATTTCGTGTC 57.928 36.000 0.00 0.00 0.00 3.67
154 155 6.093495 TCCATTCAAGATGTTATTTCGTGTCC 59.907 38.462 0.00 0.00 0.00 4.02
155 156 6.094048 CCATTCAAGATGTTATTTCGTGTCCT 59.906 38.462 0.00 0.00 0.00 3.85
156 157 7.362056 CCATTCAAGATGTTATTTCGTGTCCTT 60.362 37.037 0.00 0.00 0.00 3.36
157 158 7.504924 TTCAAGATGTTATTTCGTGTCCTTT 57.495 32.000 0.00 0.00 0.00 3.11
158 159 7.504924 TCAAGATGTTATTTCGTGTCCTTTT 57.495 32.000 0.00 0.00 0.00 2.27
159 160 7.936584 TCAAGATGTTATTTCGTGTCCTTTTT 58.063 30.769 0.00 0.00 0.00 1.94
182 183 8.458573 TTTTACACATTTAGAAGTGGACATGT 57.541 30.769 0.00 0.00 39.99 3.21
183 184 5.947228 ACACATTTAGAAGTGGACATGTG 57.053 39.130 1.15 8.24 44.62 3.21
184 185 5.376625 ACACATTTAGAAGTGGACATGTGT 58.623 37.500 1.15 9.40 46.22 3.72
185 186 6.317789 CACATTTAGAAGTGGACATGTGTT 57.682 37.500 1.15 0.00 37.69 3.32
186 187 7.433708 CACATTTAGAAGTGGACATGTGTTA 57.566 36.000 1.15 0.00 37.69 2.41
187 188 8.044060 CACATTTAGAAGTGGACATGTGTTAT 57.956 34.615 1.15 0.00 37.69 1.89
188 189 8.177663 CACATTTAGAAGTGGACATGTGTTATC 58.822 37.037 1.15 0.00 37.69 1.75
189 190 8.103305 ACATTTAGAAGTGGACATGTGTTATCT 58.897 33.333 1.15 3.09 0.00 1.98
190 191 8.950210 CATTTAGAAGTGGACATGTGTTATCTT 58.050 33.333 1.15 0.55 0.00 2.40
191 192 8.918202 TTTAGAAGTGGACATGTGTTATCTTT 57.082 30.769 1.15 0.00 0.00 2.52
192 193 8.547967 TTAGAAGTGGACATGTGTTATCTTTC 57.452 34.615 1.15 0.00 0.00 2.62
193 194 6.533730 AGAAGTGGACATGTGTTATCTTTCA 58.466 36.000 1.15 0.00 0.00 2.69
194 195 6.428159 AGAAGTGGACATGTGTTATCTTTCAC 59.572 38.462 1.15 0.00 35.43 3.18
195 196 5.620206 AGTGGACATGTGTTATCTTTCACA 58.380 37.500 1.15 0.00 46.23 3.58
205 206 8.846943 TGTGTTATCTTTCACATGACATAGTT 57.153 30.769 0.00 0.00 39.23 2.24
206 207 9.936759 TGTGTTATCTTTCACATGACATAGTTA 57.063 29.630 0.00 0.00 39.23 2.24
208 209 9.083080 TGTTATCTTTCACATGACATAGTTACG 57.917 33.333 0.00 0.00 0.00 3.18
209 210 9.084164 GTTATCTTTCACATGACATAGTTACGT 57.916 33.333 0.00 0.00 0.00 3.57
210 211 6.944557 TCTTTCACATGACATAGTTACGTG 57.055 37.500 0.00 0.00 0.00 4.49
211 212 5.867174 TCTTTCACATGACATAGTTACGTGG 59.133 40.000 0.00 0.00 0.00 4.94
212 213 4.794278 TCACATGACATAGTTACGTGGT 57.206 40.909 0.00 0.00 0.00 4.16
213 214 5.900865 TCACATGACATAGTTACGTGGTA 57.099 39.130 0.00 0.00 0.00 3.25
214 215 5.886992 TCACATGACATAGTTACGTGGTAG 58.113 41.667 0.00 0.00 0.00 3.18
215 216 5.648960 TCACATGACATAGTTACGTGGTAGA 59.351 40.000 0.00 0.00 0.00 2.59
216 217 6.151480 TCACATGACATAGTTACGTGGTAGAA 59.849 38.462 0.00 0.00 0.00 2.10
217 218 6.809689 CACATGACATAGTTACGTGGTAGAAA 59.190 38.462 0.00 0.00 0.00 2.52
218 219 7.329962 CACATGACATAGTTACGTGGTAGAAAA 59.670 37.037 0.00 0.00 0.00 2.29
219 220 8.038944 ACATGACATAGTTACGTGGTAGAAAAT 58.961 33.333 0.00 0.00 0.00 1.82
220 221 7.821595 TGACATAGTTACGTGGTAGAAAATG 57.178 36.000 0.00 0.00 0.00 2.32
221 222 7.380536 TGACATAGTTACGTGGTAGAAAATGT 58.619 34.615 0.00 0.00 0.00 2.71
222 223 7.874016 TGACATAGTTACGTGGTAGAAAATGTT 59.126 33.333 0.00 0.00 0.00 2.71
223 224 8.248117 ACATAGTTACGTGGTAGAAAATGTTC 57.752 34.615 0.00 0.00 0.00 3.18
224 225 7.874016 ACATAGTTACGTGGTAGAAAATGTTCA 59.126 33.333 0.00 0.00 36.09 3.18
225 226 8.879759 CATAGTTACGTGGTAGAAAATGTTCAT 58.120 33.333 0.00 0.00 36.09 2.57
226 227 7.129109 AGTTACGTGGTAGAAAATGTTCATG 57.871 36.000 0.00 0.00 36.09 3.07
227 228 6.148811 AGTTACGTGGTAGAAAATGTTCATGG 59.851 38.462 0.00 0.00 36.09 3.66
228 229 4.647611 ACGTGGTAGAAAATGTTCATGGA 58.352 39.130 0.00 0.00 36.09 3.41
229 230 4.695455 ACGTGGTAGAAAATGTTCATGGAG 59.305 41.667 0.00 0.00 36.09 3.86
230 231 4.437390 CGTGGTAGAAAATGTTCATGGAGC 60.437 45.833 0.00 0.00 36.09 4.70
231 232 3.689161 TGGTAGAAAATGTTCATGGAGCG 59.311 43.478 0.00 0.00 36.09 5.03
232 233 3.689649 GGTAGAAAATGTTCATGGAGCGT 59.310 43.478 0.00 0.00 36.09 5.07
233 234 4.201822 GGTAGAAAATGTTCATGGAGCGTC 60.202 45.833 0.00 0.00 36.09 5.19
234 235 3.679389 AGAAAATGTTCATGGAGCGTCT 58.321 40.909 0.00 0.00 36.09 4.18
235 236 4.832248 AGAAAATGTTCATGGAGCGTCTA 58.168 39.130 0.00 0.00 36.09 2.59
236 237 5.431765 AGAAAATGTTCATGGAGCGTCTAT 58.568 37.500 0.00 0.00 36.09 1.98
237 238 6.582636 AGAAAATGTTCATGGAGCGTCTATA 58.417 36.000 0.00 0.00 36.09 1.31
238 239 6.480320 AGAAAATGTTCATGGAGCGTCTATAC 59.520 38.462 0.00 0.00 36.09 1.47
239 240 4.937201 ATGTTCATGGAGCGTCTATACA 57.063 40.909 0.00 0.00 0.00 2.29
240 241 4.937201 TGTTCATGGAGCGTCTATACAT 57.063 40.909 0.00 0.00 0.00 2.29
241 242 4.620982 TGTTCATGGAGCGTCTATACATG 58.379 43.478 0.00 0.00 40.06 3.21
242 243 4.340950 TGTTCATGGAGCGTCTATACATGA 59.659 41.667 0.00 0.00 44.20 3.07
244 245 5.728637 TCATGGAGCGTCTATACATGAAT 57.271 39.130 0.00 0.00 43.29 2.57
245 246 6.834168 TCATGGAGCGTCTATACATGAATA 57.166 37.500 0.00 0.00 43.29 1.75
246 247 7.227049 TCATGGAGCGTCTATACATGAATAA 57.773 36.000 0.00 0.00 43.29 1.40
247 248 7.315890 TCATGGAGCGTCTATACATGAATAAG 58.684 38.462 0.00 0.00 43.29 1.73
248 249 6.894339 TGGAGCGTCTATACATGAATAAGA 57.106 37.500 0.00 0.00 0.00 2.10
249 250 6.914259 TGGAGCGTCTATACATGAATAAGAG 58.086 40.000 0.00 0.00 0.00 2.85
250 251 6.071896 TGGAGCGTCTATACATGAATAAGAGG 60.072 42.308 0.00 3.86 0.00 3.69
251 252 6.071840 GGAGCGTCTATACATGAATAAGAGGT 60.072 42.308 0.00 0.00 0.00 3.85
252 253 7.291411 AGCGTCTATACATGAATAAGAGGTT 57.709 36.000 0.00 0.00 0.00 3.50
253 254 7.371936 AGCGTCTATACATGAATAAGAGGTTC 58.628 38.462 0.00 0.00 0.00 3.62
254 255 7.231722 AGCGTCTATACATGAATAAGAGGTTCT 59.768 37.037 0.00 0.00 0.00 3.01
255 256 8.512956 GCGTCTATACATGAATAAGAGGTTCTA 58.487 37.037 0.00 0.00 0.00 2.10
292 293 7.475137 AGAAGAATCTTAGTCTGCACTTACT 57.525 36.000 0.00 0.00 33.62 2.24
293 294 7.902087 AGAAGAATCTTAGTCTGCACTTACTT 58.098 34.615 0.00 0.00 33.62 2.24
294 295 8.371699 AGAAGAATCTTAGTCTGCACTTACTTT 58.628 33.333 0.00 0.00 33.62 2.66
295 296 8.541133 AAGAATCTTAGTCTGCACTTACTTTC 57.459 34.615 0.00 0.00 33.62 2.62
296 297 6.809196 AGAATCTTAGTCTGCACTTACTTTCG 59.191 38.462 0.00 0.00 33.62 3.46
297 298 5.449107 TCTTAGTCTGCACTTACTTTCGT 57.551 39.130 0.00 0.00 33.62 3.85
298 299 6.564709 TCTTAGTCTGCACTTACTTTCGTA 57.435 37.500 0.00 0.00 33.62 3.43
299 300 6.609533 TCTTAGTCTGCACTTACTTTCGTAG 58.390 40.000 0.00 0.00 33.62 3.51
300 301 3.576648 AGTCTGCACTTACTTTCGTAGC 58.423 45.455 0.00 0.00 0.00 3.58
301 302 3.256136 AGTCTGCACTTACTTTCGTAGCT 59.744 43.478 0.00 0.00 0.00 3.32
302 303 3.988517 GTCTGCACTTACTTTCGTAGCTT 59.011 43.478 0.00 0.00 0.00 3.74
303 304 5.048224 AGTCTGCACTTACTTTCGTAGCTTA 60.048 40.000 0.00 0.00 0.00 3.09
304 305 5.805994 GTCTGCACTTACTTTCGTAGCTTAT 59.194 40.000 0.00 0.00 0.00 1.73
305 306 6.310711 GTCTGCACTTACTTTCGTAGCTTATT 59.689 38.462 0.00 0.00 0.00 1.40
306 307 7.487189 GTCTGCACTTACTTTCGTAGCTTATTA 59.513 37.037 0.00 0.00 0.00 0.98
307 308 7.701078 TCTGCACTTACTTTCGTAGCTTATTAG 59.299 37.037 0.00 0.00 0.00 1.73
308 309 7.541162 TGCACTTACTTTCGTAGCTTATTAGA 58.459 34.615 0.00 0.00 0.00 2.10
309 310 8.195436 TGCACTTACTTTCGTAGCTTATTAGAT 58.805 33.333 0.00 0.00 0.00 1.98
310 311 8.480853 GCACTTACTTTCGTAGCTTATTAGATG 58.519 37.037 0.00 0.00 0.00 2.90
311 312 9.517609 CACTTACTTTCGTAGCTTATTAGATGT 57.482 33.333 0.00 0.00 0.00 3.06
319 320 9.947669 TTCGTAGCTTATTAGATGTACTTTCTC 57.052 33.333 0.00 0.00 0.00 2.87
320 321 9.339850 TCGTAGCTTATTAGATGTACTTTCTCT 57.660 33.333 0.00 0.00 0.00 3.10
321 322 9.388346 CGTAGCTTATTAGATGTACTTTCTCTG 57.612 37.037 0.00 0.00 0.00 3.35
399 400 8.850007 ACAAAGAGAGTATTTTAAAGGAGGTC 57.150 34.615 0.00 0.00 0.00 3.85
400 401 8.437575 ACAAAGAGAGTATTTTAAAGGAGGTCA 58.562 33.333 0.00 0.00 0.00 4.02
401 402 9.284968 CAAAGAGAGTATTTTAAAGGAGGTCAA 57.715 33.333 0.00 0.00 0.00 3.18
402 403 9.508642 AAAGAGAGTATTTTAAAGGAGGTCAAG 57.491 33.333 0.00 0.00 0.00 3.02
403 404 7.106890 AGAGAGTATTTTAAAGGAGGTCAAGC 58.893 38.462 0.00 0.00 0.00 4.01
404 405 7.021998 AGAGTATTTTAAAGGAGGTCAAGCT 57.978 36.000 0.00 0.00 0.00 3.74
405 406 7.462590 AGAGTATTTTAAAGGAGGTCAAGCTT 58.537 34.615 0.00 0.00 0.00 3.74
406 407 7.608376 AGAGTATTTTAAAGGAGGTCAAGCTTC 59.392 37.037 0.00 0.00 0.00 3.86
407 408 7.231467 AGTATTTTAAAGGAGGTCAAGCTTCA 58.769 34.615 0.00 0.00 0.00 3.02
408 409 6.581171 ATTTTAAAGGAGGTCAAGCTTCAG 57.419 37.500 0.00 0.00 0.00 3.02
409 410 4.974645 TTAAAGGAGGTCAAGCTTCAGA 57.025 40.909 0.00 0.00 0.00 3.27
410 411 5.505181 TTAAAGGAGGTCAAGCTTCAGAT 57.495 39.130 0.00 0.00 0.00 2.90
411 412 3.347077 AAGGAGGTCAAGCTTCAGATG 57.653 47.619 0.00 0.00 0.00 2.90
412 413 2.544721 AGGAGGTCAAGCTTCAGATGA 58.455 47.619 0.00 0.00 0.00 2.92
413 414 2.909006 AGGAGGTCAAGCTTCAGATGAA 59.091 45.455 0.00 0.00 0.00 2.57
414 415 3.522750 AGGAGGTCAAGCTTCAGATGAAT 59.477 43.478 0.00 0.00 33.01 2.57
415 416 4.018597 AGGAGGTCAAGCTTCAGATGAATT 60.019 41.667 0.00 0.00 33.01 2.17
416 417 4.704057 GGAGGTCAAGCTTCAGATGAATTT 59.296 41.667 0.00 0.00 33.01 1.82
417 418 5.392811 GGAGGTCAAGCTTCAGATGAATTTG 60.393 44.000 0.00 11.05 33.52 2.32
418 419 5.075493 AGGTCAAGCTTCAGATGAATTTGT 58.925 37.500 0.00 1.00 33.74 2.83
419 420 5.048224 AGGTCAAGCTTCAGATGAATTTGTG 60.048 40.000 0.00 5.30 33.74 3.33
420 421 4.620184 GTCAAGCTTCAGATGAATTTGTGC 59.380 41.667 0.00 7.39 33.74 4.57
421 422 3.482722 AGCTTCAGATGAATTTGTGCG 57.517 42.857 0.00 0.00 33.01 5.34
422 423 2.816087 AGCTTCAGATGAATTTGTGCGT 59.184 40.909 0.00 0.00 33.01 5.24
423 424 4.002982 AGCTTCAGATGAATTTGTGCGTA 58.997 39.130 0.00 0.00 33.01 4.42
424 425 4.637534 AGCTTCAGATGAATTTGTGCGTAT 59.362 37.500 0.00 0.00 33.01 3.06
425 426 4.966366 GCTTCAGATGAATTTGTGCGTATC 59.034 41.667 0.00 0.00 33.01 2.24
426 427 5.447683 GCTTCAGATGAATTTGTGCGTATCA 60.448 40.000 0.00 0.00 33.01 2.15
427 428 6.682423 TTCAGATGAATTTGTGCGTATCAT 57.318 33.333 0.00 0.00 33.64 2.45
428 429 6.682423 TCAGATGAATTTGTGCGTATCATT 57.318 33.333 0.00 0.00 31.24 2.57
429 430 7.784633 TCAGATGAATTTGTGCGTATCATTA 57.215 32.000 0.00 0.00 31.24 1.90
430 431 7.854534 TCAGATGAATTTGTGCGTATCATTAG 58.145 34.615 0.00 0.00 31.24 1.73
431 432 7.710475 TCAGATGAATTTGTGCGTATCATTAGA 59.290 33.333 0.00 0.00 31.24 2.10
432 433 8.501580 CAGATGAATTTGTGCGTATCATTAGAT 58.498 33.333 0.00 0.00 38.29 1.98
433 434 8.501580 AGATGAATTTGTGCGTATCATTAGATG 58.498 33.333 0.00 0.00 35.67 2.90
434 435 6.429624 TGAATTTGTGCGTATCATTAGATGC 58.570 36.000 0.00 0.00 35.67 3.91
435 436 6.038050 TGAATTTGTGCGTATCATTAGATGCA 59.962 34.615 0.00 0.00 36.76 3.96
436 437 4.794248 TTGTGCGTATCATTAGATGCAC 57.206 40.909 11.11 11.11 46.39 4.57
438 439 4.794248 GTGCGTATCATTAGATGCACAA 57.206 40.909 12.75 0.00 45.91 3.33
439 440 5.155509 GTGCGTATCATTAGATGCACAAA 57.844 39.130 12.75 0.00 45.91 2.83
440 441 5.751680 GTGCGTATCATTAGATGCACAAAT 58.248 37.500 12.75 0.00 45.91 2.32
441 442 6.201517 GTGCGTATCATTAGATGCACAAATT 58.798 36.000 12.75 0.00 45.91 1.82
442 443 7.351981 GTGCGTATCATTAGATGCACAAATTA 58.648 34.615 12.75 0.00 45.91 1.40
443 444 8.017373 GTGCGTATCATTAGATGCACAAATTAT 58.983 33.333 12.75 0.00 45.91 1.28
444 445 8.567104 TGCGTATCATTAGATGCACAAATTATT 58.433 29.630 0.00 0.00 36.76 1.40
477 478 9.912634 TTCTTGAAATAATGACTTCAAATGGTC 57.087 29.630 0.00 0.00 40.16 4.02
478 479 9.076781 TCTTGAAATAATGACTTCAAATGGTCA 57.923 29.630 0.00 0.00 44.84 4.02
479 480 9.350357 CTTGAAATAATGACTTCAAATGGTCAG 57.650 33.333 0.00 0.00 44.13 3.51
480 481 8.408043 TGAAATAATGACTTCAAATGGTCAGT 57.592 30.769 0.00 0.00 44.13 3.41
481 482 8.859090 TGAAATAATGACTTCAAATGGTCAGTT 58.141 29.630 0.00 0.00 44.13 3.16
482 483 9.346725 GAAATAATGACTTCAAATGGTCAGTTC 57.653 33.333 0.00 0.00 44.13 3.01
483 484 8.408043 AATAATGACTTCAAATGGTCAGTTCA 57.592 30.769 0.00 0.00 44.13 3.18
484 485 6.906157 AATGACTTCAAATGGTCAGTTCAT 57.094 33.333 0.00 0.00 44.13 2.57
485 486 6.906157 ATGACTTCAAATGGTCAGTTCATT 57.094 33.333 0.00 0.00 44.13 2.57
486 487 6.075762 TGACTTCAAATGGTCAGTTCATTG 57.924 37.500 0.00 0.00 37.52 2.82
487 488 5.593909 TGACTTCAAATGGTCAGTTCATTGT 59.406 36.000 0.00 0.00 37.52 2.71
505 506 6.666417 TCATTGTTAAATTTTTGCATGGCAC 58.334 32.000 0.00 0.00 38.71 5.01
507 508 3.496130 TGTTAAATTTTTGCATGGCACGG 59.504 39.130 0.00 0.00 38.71 4.94
520 521 3.951775 TGGCACGGCTGAATTTAAATT 57.048 38.095 13.24 13.24 0.00 1.82
522 523 3.186909 GGCACGGCTGAATTTAAATTCC 58.813 45.455 29.31 18.40 43.19 3.01
523 524 3.186909 GCACGGCTGAATTTAAATTCCC 58.813 45.455 29.31 23.82 43.19 3.97
524 525 3.119137 GCACGGCTGAATTTAAATTCCCT 60.119 43.478 29.31 15.46 43.19 4.20
528 529 5.130350 CGGCTGAATTTAAATTCCCTCCTA 58.870 41.667 29.31 14.49 43.19 2.94
530 531 6.129874 GGCTGAATTTAAATTCCCTCCTACT 58.870 40.000 29.31 0.54 43.19 2.57
531 532 6.039829 GGCTGAATTTAAATTCCCTCCTACTG 59.960 42.308 29.31 13.47 43.19 2.74
542 543 2.101582 CCCTCCTACTGTACATGTGAGC 59.898 54.545 9.11 0.00 0.00 4.26
574 575 5.508200 AAGCTTGTTCGATTTGTTTACCA 57.492 34.783 0.00 0.00 0.00 3.25
575 576 4.855531 AGCTTGTTCGATTTGTTTACCAC 58.144 39.130 0.00 0.00 0.00 4.16
576 577 4.336993 AGCTTGTTCGATTTGTTTACCACA 59.663 37.500 0.00 0.00 0.00 4.17
577 578 5.009610 AGCTTGTTCGATTTGTTTACCACAT 59.990 36.000 0.00 0.00 34.43 3.21
578 579 6.205853 AGCTTGTTCGATTTGTTTACCACATA 59.794 34.615 0.00 0.00 34.43 2.29
605 606 9.745018 ACATATTCCACCAAATTCAGATATAGG 57.255 33.333 0.00 0.00 0.00 2.57
615 616 7.654520 CCAAATTCAGATATAGGCATTTGTTGG 59.345 37.037 8.99 0.00 32.19 3.77
623 624 3.942130 AGGCATTTGTTGGTTTAGCTC 57.058 42.857 0.00 0.00 0.00 4.09
640 641 6.892658 TTAGCTCTGGTTGCTCAATTTTTA 57.107 33.333 0.00 0.00 41.46 1.52
649 650 7.056635 TGGTTGCTCAATTTTTAAATGGGAAA 58.943 30.769 0.00 0.00 0.00 3.13
656 658 8.900983 TCAATTTTTAAATGGGAAAGTTGGAG 57.099 30.769 0.00 0.00 34.90 3.86
677 679 9.631257 TTGGAGTTGTAATATCACATGATCATT 57.369 29.630 5.16 0.00 36.05 2.57
678 680 9.631257 TGGAGTTGTAATATCACATGATCATTT 57.369 29.630 5.16 0.00 36.05 2.32
733 735 9.814899 TTTGTAAATGTCTGATCAACACAAAAT 57.185 25.926 10.43 4.19 0.00 1.82
813 944 6.372659 ACAGTTTGTGCTAATCTTGATCGATT 59.627 34.615 0.00 2.08 37.40 3.34
882 1013 7.096065 GCATGTTGGACTTCTGTTTCATAAAAC 60.096 37.037 0.00 0.00 44.18 2.43
936 1067 0.466189 ACACCTTCCAGCTGGTTGTG 60.466 55.000 31.72 31.72 33.75 3.33
937 1068 0.179020 CACCTTCCAGCTGGTTGTGA 60.179 55.000 30.81 14.75 33.75 3.58
938 1069 0.179018 ACCTTCCAGCTGGTTGTGAC 60.179 55.000 31.58 0.00 36.34 3.67
939 1070 0.109342 CCTTCCAGCTGGTTGTGACT 59.891 55.000 31.58 0.00 36.34 3.41
940 1071 1.477558 CCTTCCAGCTGGTTGTGACTT 60.478 52.381 31.58 0.00 36.34 3.01
941 1072 1.605710 CTTCCAGCTGGTTGTGACTTG 59.394 52.381 31.58 8.97 36.34 3.16
942 1073 0.546122 TCCAGCTGGTTGTGACTTGT 59.454 50.000 31.58 0.00 36.34 3.16
943 1074 0.664761 CCAGCTGGTTGTGACTTGTG 59.335 55.000 25.53 0.00 0.00 3.33
972 1103 1.276421 CATCTTTCTCCACGTCCACCT 59.724 52.381 0.00 0.00 0.00 4.00
1532 1666 0.976073 TACGGGCTTGAGAAGGAGGG 60.976 60.000 0.00 0.00 0.00 4.30
1542 1676 1.083141 GAAGGAGGGGGAGAAGGGT 59.917 63.158 0.00 0.00 0.00 4.34
1830 1971 7.771826 TCAGATGCATTTAGAGATTGATGTTCA 59.228 33.333 0.00 0.00 0.00 3.18
1879 2020 9.458374 GTGTGAGCTAGAGAATATTTCTAGTTC 57.542 37.037 24.64 24.64 46.79 3.01
1906 2047 8.908903 CAGAAGATAGTTCAACCTATGTAGACT 58.091 37.037 0.00 0.00 0.00 3.24
1972 2113 1.580059 CTAAGGTGGCCCTGAACCTA 58.420 55.000 12.68 1.96 46.29 3.08
1984 2125 3.600388 CCTGAACCTATGAACCACAGTC 58.400 50.000 0.00 0.00 0.00 3.51
1993 2134 1.416401 TGAACCACAGTCAGACCCTTC 59.584 52.381 0.00 0.00 0.00 3.46
1997 2138 2.222027 CCACAGTCAGACCCTTCAAAC 58.778 52.381 0.00 0.00 0.00 2.93
2012 2153 8.877864 ACCCTTCAAACATAATTCTACATCAA 57.122 30.769 0.00 0.00 0.00 2.57
2094 2401 5.221581 GCTCCCTCCGTACCAAAATATAAGA 60.222 44.000 0.00 0.00 0.00 2.10
2095 2402 6.165700 TCCCTCCGTACCAAAATATAAGAC 57.834 41.667 0.00 0.00 0.00 3.01
2096 2403 4.986659 CCCTCCGTACCAAAATATAAGACG 59.013 45.833 0.00 0.00 0.00 4.18
2098 2405 6.044682 CCTCCGTACCAAAATATAAGACGTT 58.955 40.000 0.00 0.00 0.00 3.99
2100 2407 7.064966 CCTCCGTACCAAAATATAAGACGTTTT 59.935 37.037 0.00 0.00 0.00 2.43
2176 2483 0.397254 GGACAGCCTAGGCCTCACTA 60.397 60.000 30.42 0.00 43.17 2.74
2191 2498 4.260866 GCCTCACTAGTAGATCGTCTGAAC 60.261 50.000 3.59 0.00 0.00 3.18
2218 2526 6.129194 GGCGTCAAAGTCAAAATCAATGTAAC 60.129 38.462 0.00 0.00 0.00 2.50
2220 2528 6.915300 CGTCAAAGTCAAAATCAATGTAACCA 59.085 34.615 0.00 0.00 0.00 3.67
2328 2636 7.918076 ACTGAGTTCTAGGGATGTATCAAAAA 58.082 34.615 0.00 0.00 0.00 1.94
2329 2637 8.043710 ACTGAGTTCTAGGGATGTATCAAAAAG 58.956 37.037 0.00 0.00 0.00 2.27
2330 2638 7.338710 TGAGTTCTAGGGATGTATCAAAAAGG 58.661 38.462 0.00 0.00 0.00 3.11
2331 2639 6.663734 AGTTCTAGGGATGTATCAAAAAGGG 58.336 40.000 0.00 0.00 0.00 3.95
2332 2640 6.447084 AGTTCTAGGGATGTATCAAAAAGGGA 59.553 38.462 0.00 0.00 0.00 4.20
2389 2715 6.866248 ACACCCAAATAATGCTTAAAGTTTCG 59.134 34.615 0.00 0.00 0.00 3.46
2390 2716 6.310224 CACCCAAATAATGCTTAAAGTTTCGG 59.690 38.462 0.00 0.00 0.00 4.30
2411 2737 6.072649 TCGGAACACAATATAGAGTGGGATA 58.927 40.000 0.00 0.00 39.99 2.59
2471 2805 9.478019 GAAATTAATGACGTGAAGTTCTGTATG 57.522 33.333 4.17 0.00 0.00 2.39
2544 2930 5.514274 TTTGAGTTGTGATGGAAAGAACC 57.486 39.130 0.00 0.00 0.00 3.62
2552 2938 5.003160 TGTGATGGAAAGAACCACATACAG 58.997 41.667 0.00 0.00 43.03 2.74
2555 2941 6.016276 GTGATGGAAAGAACCACATACAGTTT 60.016 38.462 0.00 0.00 43.03 2.66
2614 3000 5.065090 TGACATTTCCTACGCATTTGATCAG 59.935 40.000 0.00 0.00 0.00 2.90
2615 3001 5.185454 ACATTTCCTACGCATTTGATCAGA 58.815 37.500 0.00 0.00 0.00 3.27
2636 3022 6.944290 TCAGAAAATCTCCAGAACATGATGTT 59.056 34.615 11.10 11.10 44.37 2.71
2674 3147 6.077961 GTGAAACAAATTATAAGCGGTTGC 57.922 37.500 10.73 0.00 38.06 4.17
2691 3164 1.571955 TGCATCTCTCTGGCTTACCA 58.428 50.000 0.00 0.00 46.51 3.25
2717 3192 9.638176 ATCTATGCTCAGTCCTCATAAAAATTT 57.362 29.630 0.00 0.00 0.00 1.82
2754 3229 5.949354 ACATAGTCTAGAGCCATAAGCCTAG 59.051 44.000 0.00 0.00 45.47 3.02
3144 3619 1.065636 TCTTCAGCCAGATTGAGCCTG 60.066 52.381 0.00 0.00 0.00 4.85
3424 3908 3.357079 GGGCAGCGACCAACACAG 61.357 66.667 0.29 0.00 0.00 3.66
3479 3963 4.277423 CGAAGTAGAACCCCATTTGTTGTT 59.723 41.667 0.00 0.00 0.00 2.83
3569 4053 0.036732 TCCAGCATCTTGAACCGCTT 59.963 50.000 0.00 0.00 30.72 4.68
3725 4209 2.919043 GGGATGGCCGGACAAGAT 59.081 61.111 17.77 0.00 33.83 2.40
4130 4614 3.570550 AGAACGAGGAATCCTAAGGATCG 59.429 47.826 0.00 3.03 42.27 3.69
4136 4620 5.065474 CGAGGAATCCTAAGGATCGTAGATC 59.935 48.000 0.00 1.63 42.27 2.75
4292 4777 1.403679 GGCTGCGTTTGTATATGCCAA 59.596 47.619 0.00 0.00 38.79 4.52
4317 4802 0.823356 GGCAACACAGCTTTCTCCCA 60.823 55.000 0.00 0.00 34.17 4.37
4496 4981 4.137116 TGGCACAACATCATACTACCTC 57.863 45.455 0.00 0.00 31.92 3.85
4497 4982 3.118408 TGGCACAACATCATACTACCTCC 60.118 47.826 0.00 0.00 31.92 4.30
4498 4983 3.123804 GCACAACATCATACTACCTCCG 58.876 50.000 0.00 0.00 0.00 4.63
4499 4984 3.430374 GCACAACATCATACTACCTCCGT 60.430 47.826 0.00 0.00 0.00 4.69
4500 4985 4.360563 CACAACATCATACTACCTCCGTC 58.639 47.826 0.00 0.00 0.00 4.79
4501 4986 3.383825 ACAACATCATACTACCTCCGTCC 59.616 47.826 0.00 0.00 0.00 4.79
4502 4987 2.595238 ACATCATACTACCTCCGTCCC 58.405 52.381 0.00 0.00 0.00 4.46
4503 4988 2.091499 ACATCATACTACCTCCGTCCCA 60.091 50.000 0.00 0.00 0.00 4.37
4504 4989 2.832643 TCATACTACCTCCGTCCCAA 57.167 50.000 0.00 0.00 0.00 4.12
4505 4990 3.104519 TCATACTACCTCCGTCCCAAA 57.895 47.619 0.00 0.00 0.00 3.28
4506 4991 3.443052 TCATACTACCTCCGTCCCAAAA 58.557 45.455 0.00 0.00 0.00 2.44
4507 4992 4.035112 TCATACTACCTCCGTCCCAAAAT 58.965 43.478 0.00 0.00 0.00 1.82
4508 4993 5.210430 TCATACTACCTCCGTCCCAAAATA 58.790 41.667 0.00 0.00 0.00 1.40
4509 4994 5.662208 TCATACTACCTCCGTCCCAAAATAA 59.338 40.000 0.00 0.00 0.00 1.40
4510 4995 4.482952 ACTACCTCCGTCCCAAAATAAG 57.517 45.455 0.00 0.00 0.00 1.73
4511 4996 3.842436 ACTACCTCCGTCCCAAAATAAGT 59.158 43.478 0.00 0.00 0.00 2.24
4512 4997 3.067684 ACCTCCGTCCCAAAATAAGTG 57.932 47.619 0.00 0.00 0.00 3.16
4513 4998 2.640826 ACCTCCGTCCCAAAATAAGTGA 59.359 45.455 0.00 0.00 0.00 3.41
4514 4999 3.007635 CCTCCGTCCCAAAATAAGTGAC 58.992 50.000 0.00 0.00 0.00 3.67
4515 5000 3.307480 CCTCCGTCCCAAAATAAGTGACT 60.307 47.826 0.00 0.00 0.00 3.41
4516 5001 3.933332 CTCCGTCCCAAAATAAGTGACTC 59.067 47.826 0.00 0.00 0.00 3.36
4517 5002 3.325425 TCCGTCCCAAAATAAGTGACTCA 59.675 43.478 0.00 0.00 0.00 3.41
4518 5003 4.069304 CCGTCCCAAAATAAGTGACTCAA 58.931 43.478 0.00 0.00 0.00 3.02
4519 5004 4.083484 CCGTCCCAAAATAAGTGACTCAAC 60.083 45.833 0.00 0.00 0.00 3.18
4520 5005 4.755123 CGTCCCAAAATAAGTGACTCAACT 59.245 41.667 0.00 0.00 0.00 3.16
4521 5006 5.238650 CGTCCCAAAATAAGTGACTCAACTT 59.761 40.000 0.00 0.00 42.89 2.66
4522 5007 6.238648 CGTCCCAAAATAAGTGACTCAACTTT 60.239 38.462 0.00 0.00 40.77 2.66
4523 5008 6.918022 GTCCCAAAATAAGTGACTCAACTTTG 59.082 38.462 0.00 0.00 40.77 2.77
4524 5009 6.605594 TCCCAAAATAAGTGACTCAACTTTGT 59.394 34.615 0.00 0.00 40.77 2.83
4525 5010 7.776030 TCCCAAAATAAGTGACTCAACTTTGTA 59.224 33.333 0.00 0.00 40.77 2.41
4526 5011 8.576442 CCCAAAATAAGTGACTCAACTTTGTAT 58.424 33.333 0.00 0.00 40.77 2.29
4527 5012 9.965824 CCAAAATAAGTGACTCAACTTTGTATT 57.034 29.630 0.00 0.00 40.77 1.89
4531 5016 9.726438 AATAAGTGACTCAACTTTGTATTAGCT 57.274 29.630 0.00 0.00 40.77 3.32
4532 5017 9.726438 ATAAGTGACTCAACTTTGTATTAGCTT 57.274 29.630 0.00 0.00 40.77 3.74
4533 5018 8.451908 AAGTGACTCAACTTTGTATTAGCTTT 57.548 30.769 0.00 0.00 37.05 3.51
4534 5019 9.555727 AAGTGACTCAACTTTGTATTAGCTTTA 57.444 29.630 0.00 0.00 37.05 1.85
4535 5020 9.209175 AGTGACTCAACTTTGTATTAGCTTTAG 57.791 33.333 0.00 0.00 0.00 1.85
4536 5021 8.989980 GTGACTCAACTTTGTATTAGCTTTAGT 58.010 33.333 0.00 0.00 0.00 2.24
4539 5024 9.991906 ACTCAACTTTGTATTAGCTTTAGTACA 57.008 29.630 0.00 0.00 0.00 2.90
4554 5039 9.828039 AGCTTTAGTACAAAGTTAGTACAAACT 57.172 29.630 14.90 0.00 43.24 2.66
4567 5052 9.063615 AGTTAGTACAAACTCACTTATTTTGGG 57.936 33.333 0.00 0.00 36.93 4.12
4568 5053 9.059260 GTTAGTACAAACTCACTTATTTTGGGA 57.941 33.333 0.00 0.00 37.15 4.37
4569 5054 7.506328 AGTACAAACTCACTTATTTTGGGAC 57.494 36.000 0.00 0.00 33.28 4.46
4570 5055 5.432885 ACAAACTCACTTATTTTGGGACG 57.567 39.130 0.00 0.00 33.28 4.79
4571 5056 4.277423 ACAAACTCACTTATTTTGGGACGG 59.723 41.667 0.00 0.00 33.28 4.79
4572 5057 4.360951 AACTCACTTATTTTGGGACGGA 57.639 40.909 0.00 0.00 0.00 4.69
4573 5058 3.939066 ACTCACTTATTTTGGGACGGAG 58.061 45.455 0.00 0.00 0.00 4.63
4574 5059 3.270877 CTCACTTATTTTGGGACGGAGG 58.729 50.000 0.00 0.00 0.00 4.30
4575 5060 2.026636 TCACTTATTTTGGGACGGAGGG 60.027 50.000 0.00 0.00 0.00 4.30
4576 5061 2.026636 CACTTATTTTGGGACGGAGGGA 60.027 50.000 0.00 0.00 0.00 4.20
4577 5062 2.238898 ACTTATTTTGGGACGGAGGGAG 59.761 50.000 0.00 0.00 0.00 4.30
4578 5063 1.961133 TATTTTGGGACGGAGGGAGT 58.039 50.000 0.00 0.00 0.00 3.85
4579 5064 1.961133 ATTTTGGGACGGAGGGAGTA 58.039 50.000 0.00 0.00 0.00 2.59
4580 5065 0.978907 TTTTGGGACGGAGGGAGTAC 59.021 55.000 0.00 0.00 0.00 2.73
4581 5066 0.115745 TTTGGGACGGAGGGAGTACT 59.884 55.000 0.00 0.00 0.00 2.73
4625 5110 3.242936 GGCATCAATGGAAAAATGCATGC 60.243 43.478 11.82 11.82 44.90 4.06
4640 5125 2.948323 TGCGTGCATGCACTTCTG 59.052 55.556 39.46 27.97 44.16 3.02
4643 5128 1.951510 CGTGCATGCACTTCTGGTT 59.048 52.632 39.46 0.00 44.16 3.67
4648 5133 2.162681 GCATGCACTTCTGGTTACCTT 58.837 47.619 14.21 0.00 0.00 3.50
4658 5143 4.261578 TCTGGTTACCTTGAGTTTACCG 57.738 45.455 2.07 0.00 35.66 4.02
4721 5217 3.835395 AGCAAGCTTCTCCACTAACTAGT 59.165 43.478 0.00 0.00 36.90 2.57
4723 5219 4.390297 GCAAGCTTCTCCACTAACTAGTTG 59.610 45.833 18.56 10.41 33.46 3.16
4812 5312 3.961477 TGTTTGGAACAGATTGTGTCG 57.039 42.857 0.00 0.00 42.39 4.35
4820 5320 1.464608 ACAGATTGTGTCGCGGATTTG 59.535 47.619 6.13 1.71 31.90 2.32
4959 5459 8.518430 TTGATATGCCTACACATAAACACAAT 57.482 30.769 0.00 0.00 36.17 2.71
5021 5521 4.055360 GGGTAAAAATCAACACTGTTGGC 58.945 43.478 19.60 4.42 0.00 4.52
5037 5538 1.186917 TGGCCCAGCAACAATGAAGG 61.187 55.000 0.00 0.00 0.00 3.46
5070 5571 2.034879 GTGGTGGTGTGGCTCGATG 61.035 63.158 0.00 0.00 0.00 3.84
5074 5575 0.602638 GTGGTGTGGCTCGATGTCAA 60.603 55.000 0.00 0.00 28.98 3.18
5092 5593 2.123982 CTGGCCTTCATGGGAGCC 60.124 66.667 3.32 12.27 45.96 4.70
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
9 10 5.396884 GGGCAGTGTATCTCAAGATAACCTT 60.397 44.000 1.35 0.00 38.60 3.50
10 11 4.101741 GGGCAGTGTATCTCAAGATAACCT 59.898 45.833 1.35 0.00 38.60 3.50
11 12 4.101741 AGGGCAGTGTATCTCAAGATAACC 59.898 45.833 1.35 0.30 38.60 2.85
12 13 5.283457 AGGGCAGTGTATCTCAAGATAAC 57.717 43.478 1.35 3.68 38.60 1.89
13 14 4.345257 GGAGGGCAGTGTATCTCAAGATAA 59.655 45.833 1.35 0.00 38.60 1.75
14 15 3.898123 GGAGGGCAGTGTATCTCAAGATA 59.102 47.826 10.19 0.00 36.05 1.98
15 16 2.703007 GGAGGGCAGTGTATCTCAAGAT 59.297 50.000 10.19 0.00 38.51 2.40
16 17 2.111384 GGAGGGCAGTGTATCTCAAGA 58.889 52.381 10.19 0.00 0.00 3.02
17 18 1.833630 TGGAGGGCAGTGTATCTCAAG 59.166 52.381 10.19 0.00 0.00 3.02
18 19 1.951209 TGGAGGGCAGTGTATCTCAA 58.049 50.000 10.19 0.00 0.00 3.02
19 20 1.951209 TTGGAGGGCAGTGTATCTCA 58.049 50.000 10.19 0.00 0.00 3.27
20 21 2.435805 TCATTGGAGGGCAGTGTATCTC 59.564 50.000 0.00 0.00 0.00 2.75
21 22 2.481441 TCATTGGAGGGCAGTGTATCT 58.519 47.619 0.00 0.00 0.00 1.98
22 23 3.281727 TTCATTGGAGGGCAGTGTATC 57.718 47.619 0.00 0.00 0.00 2.24
23 24 3.737559 TTTCATTGGAGGGCAGTGTAT 57.262 42.857 0.00 0.00 0.00 2.29
24 25 3.737559 ATTTCATTGGAGGGCAGTGTA 57.262 42.857 0.00 0.00 0.00 2.90
25 26 2.610438 ATTTCATTGGAGGGCAGTGT 57.390 45.000 0.00 0.00 0.00 3.55
26 27 4.646040 TGATAATTTCATTGGAGGGCAGTG 59.354 41.667 0.00 0.00 0.00 3.66
27 28 4.870636 TGATAATTTCATTGGAGGGCAGT 58.129 39.130 0.00 0.00 0.00 4.40
28 29 5.857471 TTGATAATTTCATTGGAGGGCAG 57.143 39.130 0.00 0.00 33.34 4.85
29 30 5.395546 GCTTTGATAATTTCATTGGAGGGCA 60.396 40.000 0.00 0.00 33.34 5.36
30 31 5.052481 GCTTTGATAATTTCATTGGAGGGC 58.948 41.667 0.00 0.00 33.34 5.19
31 32 6.475596 AGCTTTGATAATTTCATTGGAGGG 57.524 37.500 0.00 0.00 33.34 4.30
32 33 8.469200 TGTTAGCTTTGATAATTTCATTGGAGG 58.531 33.333 0.00 0.00 33.34 4.30
33 34 9.859427 TTGTTAGCTTTGATAATTTCATTGGAG 57.141 29.630 0.00 0.00 33.34 3.86
34 35 9.859427 CTTGTTAGCTTTGATAATTTCATTGGA 57.141 29.630 0.00 0.00 33.34 3.53
35 36 9.643693 ACTTGTTAGCTTTGATAATTTCATTGG 57.356 29.630 0.00 0.00 33.34 3.16
46 47 9.686683 AAGGTATTATCACTTGTTAGCTTTGAT 57.313 29.630 0.00 0.00 29.06 2.57
66 67 9.189156 ACTCATGCATAAACACATTTAAGGTAT 57.811 29.630 0.00 0.00 33.98 2.73
67 68 8.574251 ACTCATGCATAAACACATTTAAGGTA 57.426 30.769 0.00 0.00 33.98 3.08
68 69 7.466746 ACTCATGCATAAACACATTTAAGGT 57.533 32.000 0.00 0.00 33.98 3.50
69 70 8.761575 AAACTCATGCATAAACACATTTAAGG 57.238 30.769 0.00 0.00 33.98 2.69
71 72 8.494347 GCAAAACTCATGCATAAACACATTTAA 58.506 29.630 0.00 0.00 43.29 1.52
72 73 7.871973 AGCAAAACTCATGCATAAACACATTTA 59.128 29.630 0.00 0.00 46.22 1.40
73 74 6.707161 AGCAAAACTCATGCATAAACACATTT 59.293 30.769 0.00 0.00 46.22 2.32
74 75 6.225318 AGCAAAACTCATGCATAAACACATT 58.775 32.000 0.00 0.00 46.22 2.71
75 76 5.786311 AGCAAAACTCATGCATAAACACAT 58.214 33.333 0.00 0.00 46.22 3.21
76 77 5.199024 AGCAAAACTCATGCATAAACACA 57.801 34.783 0.00 0.00 46.22 3.72
77 78 5.287035 GCTAGCAAAACTCATGCATAAACAC 59.713 40.000 10.63 0.00 46.22 3.32
78 79 5.401550 GCTAGCAAAACTCATGCATAAACA 58.598 37.500 10.63 0.00 46.22 2.83
79 80 4.800471 GGCTAGCAAAACTCATGCATAAAC 59.200 41.667 18.24 0.00 46.22 2.01
80 81 4.706476 AGGCTAGCAAAACTCATGCATAAA 59.294 37.500 18.24 0.00 46.22 1.40
81 82 4.096833 CAGGCTAGCAAAACTCATGCATAA 59.903 41.667 18.24 0.00 46.22 1.90
82 83 3.628942 CAGGCTAGCAAAACTCATGCATA 59.371 43.478 18.24 0.00 46.22 3.14
83 84 2.426024 CAGGCTAGCAAAACTCATGCAT 59.574 45.455 18.24 0.00 46.22 3.96
84 85 1.814394 CAGGCTAGCAAAACTCATGCA 59.186 47.619 18.24 0.00 46.22 3.96
85 86 1.133790 CCAGGCTAGCAAAACTCATGC 59.866 52.381 18.24 0.00 44.15 4.06
86 87 2.715046 TCCAGGCTAGCAAAACTCATG 58.285 47.619 18.24 1.73 0.00 3.07
87 88 3.439857 TTCCAGGCTAGCAAAACTCAT 57.560 42.857 18.24 0.00 0.00 2.90
88 89 2.949177 TTCCAGGCTAGCAAAACTCA 57.051 45.000 18.24 0.00 0.00 3.41
89 90 2.095008 GCTTTCCAGGCTAGCAAAACTC 60.095 50.000 18.24 0.00 35.05 3.01
90 91 1.889170 GCTTTCCAGGCTAGCAAAACT 59.111 47.619 18.24 0.57 35.05 2.66
91 92 1.613437 TGCTTTCCAGGCTAGCAAAAC 59.387 47.619 18.24 4.49 41.57 2.43
92 93 1.993956 TGCTTTCCAGGCTAGCAAAA 58.006 45.000 18.24 9.88 41.57 2.44
93 94 2.220653 ATGCTTTCCAGGCTAGCAAA 57.779 45.000 18.24 7.40 46.78 3.68
94 95 2.220653 AATGCTTTCCAGGCTAGCAA 57.779 45.000 18.24 0.00 46.78 3.91
96 97 3.217626 ACATAATGCTTTCCAGGCTAGC 58.782 45.455 6.04 6.04 35.50 3.42
97 98 6.488006 ACAATACATAATGCTTTCCAGGCTAG 59.512 38.462 0.00 0.00 0.00 3.42
98 99 6.262944 CACAATACATAATGCTTTCCAGGCTA 59.737 38.462 0.00 0.00 0.00 3.93
99 100 5.068198 CACAATACATAATGCTTTCCAGGCT 59.932 40.000 0.00 0.00 0.00 4.58
100 101 5.067674 TCACAATACATAATGCTTTCCAGGC 59.932 40.000 0.00 0.00 0.00 4.85
101 102 6.698008 TCACAATACATAATGCTTTCCAGG 57.302 37.500 0.00 0.00 0.00 4.45
102 103 7.067372 TCCTTCACAATACATAATGCTTTCCAG 59.933 37.037 0.00 0.00 0.00 3.86
103 104 6.889177 TCCTTCACAATACATAATGCTTTCCA 59.111 34.615 0.00 0.00 0.00 3.53
104 105 7.333528 TCCTTCACAATACATAATGCTTTCC 57.666 36.000 0.00 0.00 0.00 3.13
105 106 8.078596 GGATCCTTCACAATACATAATGCTTTC 58.921 37.037 3.84 0.00 0.00 2.62
106 107 7.560991 TGGATCCTTCACAATACATAATGCTTT 59.439 33.333 14.23 0.00 0.00 3.51
107 108 7.062322 TGGATCCTTCACAATACATAATGCTT 58.938 34.615 14.23 0.00 0.00 3.91
108 109 6.604171 TGGATCCTTCACAATACATAATGCT 58.396 36.000 14.23 0.00 0.00 3.79
109 110 6.882610 TGGATCCTTCACAATACATAATGC 57.117 37.500 14.23 0.00 0.00 3.56
110 111 9.070179 TGAATGGATCCTTCACAATACATAATG 57.930 33.333 14.23 0.00 0.00 1.90
111 112 9.645128 TTGAATGGATCCTTCACAATACATAAT 57.355 29.630 19.90 0.00 32.57 1.28
112 113 9.123902 CTTGAATGGATCCTTCACAATACATAA 57.876 33.333 19.90 7.24 32.57 1.90
113 114 8.493607 TCTTGAATGGATCCTTCACAATACATA 58.506 33.333 19.90 7.74 32.57 2.29
114 115 7.348815 TCTTGAATGGATCCTTCACAATACAT 58.651 34.615 19.90 0.00 32.57 2.29
115 116 6.720309 TCTTGAATGGATCCTTCACAATACA 58.280 36.000 19.90 8.76 32.57 2.29
116 117 7.284034 ACATCTTGAATGGATCCTTCACAATAC 59.716 37.037 19.90 2.51 32.57 1.89
117 118 7.348815 ACATCTTGAATGGATCCTTCACAATA 58.651 34.615 19.90 13.30 32.57 1.90
118 119 6.192773 ACATCTTGAATGGATCCTTCACAAT 58.807 36.000 19.90 14.94 32.57 2.71
119 120 5.573219 ACATCTTGAATGGATCCTTCACAA 58.427 37.500 19.90 17.14 32.57 3.33
120 121 5.183530 ACATCTTGAATGGATCCTTCACA 57.816 39.130 19.90 12.38 32.57 3.58
121 122 7.814264 ATAACATCTTGAATGGATCCTTCAC 57.186 36.000 19.90 10.45 32.57 3.18
122 123 8.827832 AAATAACATCTTGAATGGATCCTTCA 57.172 30.769 14.23 16.31 0.00 3.02
123 124 8.072567 CGAAATAACATCTTGAATGGATCCTTC 58.927 37.037 14.23 14.00 0.00 3.46
124 125 7.557719 ACGAAATAACATCTTGAATGGATCCTT 59.442 33.333 14.23 3.29 0.00 3.36
125 126 7.012704 CACGAAATAACATCTTGAATGGATCCT 59.987 37.037 14.23 0.00 0.00 3.24
126 127 7.134815 CACGAAATAACATCTTGAATGGATCC 58.865 38.462 4.20 4.20 0.00 3.36
127 128 7.697691 ACACGAAATAACATCTTGAATGGATC 58.302 34.615 0.00 0.00 0.00 3.36
128 129 7.201732 GGACACGAAATAACATCTTGAATGGAT 60.202 37.037 0.00 0.00 0.00 3.41
129 130 6.093495 GGACACGAAATAACATCTTGAATGGA 59.907 38.462 0.00 0.00 0.00 3.41
130 131 6.094048 AGGACACGAAATAACATCTTGAATGG 59.906 38.462 0.00 0.00 0.00 3.16
131 132 7.076842 AGGACACGAAATAACATCTTGAATG 57.923 36.000 0.00 0.00 0.00 2.67
132 133 7.687941 AAGGACACGAAATAACATCTTGAAT 57.312 32.000 0.00 0.00 0.00 2.57
133 134 7.504924 AAAGGACACGAAATAACATCTTGAA 57.495 32.000 0.00 0.00 0.00 2.69
134 135 7.504924 AAAAGGACACGAAATAACATCTTGA 57.495 32.000 0.00 0.00 0.00 3.02
156 157 8.908903 ACATGTCCACTTCTAAATGTGTAAAAA 58.091 29.630 0.00 0.00 32.76 1.94
157 158 8.349245 CACATGTCCACTTCTAAATGTGTAAAA 58.651 33.333 0.00 0.00 39.84 1.52
158 159 7.870826 CACATGTCCACTTCTAAATGTGTAAA 58.129 34.615 0.00 0.00 39.84 2.01
159 160 7.433708 CACATGTCCACTTCTAAATGTGTAA 57.566 36.000 0.00 0.00 39.84 2.41
161 162 5.947228 CACATGTCCACTTCTAAATGTGT 57.053 39.130 0.00 0.00 39.84 3.72
162 163 5.947228 ACACATGTCCACTTCTAAATGTG 57.053 39.130 11.03 11.03 46.47 3.21
163 164 8.103305 AGATAACACATGTCCACTTCTAAATGT 58.897 33.333 0.00 0.00 0.00 2.71
164 165 8.498054 AGATAACACATGTCCACTTCTAAATG 57.502 34.615 0.00 0.00 0.00 2.32
165 166 9.520515 AAAGATAACACATGTCCACTTCTAAAT 57.479 29.630 0.00 0.00 0.00 1.40
166 167 8.918202 AAAGATAACACATGTCCACTTCTAAA 57.082 30.769 0.00 0.00 0.00 1.85
167 168 8.154203 TGAAAGATAACACATGTCCACTTCTAA 58.846 33.333 0.00 0.00 0.00 2.10
168 169 7.602644 GTGAAAGATAACACATGTCCACTTCTA 59.397 37.037 0.00 0.00 37.05 2.10
169 170 6.428159 GTGAAAGATAACACATGTCCACTTCT 59.572 38.462 0.00 0.00 37.05 2.85
170 171 6.204688 TGTGAAAGATAACACATGTCCACTTC 59.795 38.462 0.00 0.00 41.19 3.01
171 172 6.061441 TGTGAAAGATAACACATGTCCACTT 58.939 36.000 0.00 0.00 41.19 3.16
172 173 5.620206 TGTGAAAGATAACACATGTCCACT 58.380 37.500 0.00 0.00 41.19 4.00
173 174 5.940192 TGTGAAAGATAACACATGTCCAC 57.060 39.130 0.00 0.00 41.19 4.02
182 183 9.083080 CGTAACTATGTCATGTGAAAGATAACA 57.917 33.333 0.00 0.00 0.00 2.41
183 184 9.084164 ACGTAACTATGTCATGTGAAAGATAAC 57.916 33.333 0.00 0.00 0.00 1.89
184 185 9.083080 CACGTAACTATGTCATGTGAAAGATAA 57.917 33.333 0.00 0.00 0.00 1.75
185 186 7.704899 CCACGTAACTATGTCATGTGAAAGATA 59.295 37.037 0.00 0.00 0.00 1.98
186 187 6.535150 CCACGTAACTATGTCATGTGAAAGAT 59.465 38.462 0.00 0.00 0.00 2.40
187 188 5.867174 CCACGTAACTATGTCATGTGAAAGA 59.133 40.000 0.00 0.00 0.00 2.52
188 189 5.637810 ACCACGTAACTATGTCATGTGAAAG 59.362 40.000 0.00 0.00 0.00 2.62
189 190 5.543714 ACCACGTAACTATGTCATGTGAAA 58.456 37.500 0.00 0.00 0.00 2.69
190 191 5.142061 ACCACGTAACTATGTCATGTGAA 57.858 39.130 0.00 0.00 0.00 3.18
191 192 4.794278 ACCACGTAACTATGTCATGTGA 57.206 40.909 0.00 0.00 0.00 3.58
192 193 5.886992 TCTACCACGTAACTATGTCATGTG 58.113 41.667 0.00 0.00 0.00 3.21
193 194 6.519679 TTCTACCACGTAACTATGTCATGT 57.480 37.500 0.00 0.00 0.00 3.21
194 195 7.821595 TTTTCTACCACGTAACTATGTCATG 57.178 36.000 0.00 0.00 0.00 3.07
195 196 8.038944 ACATTTTCTACCACGTAACTATGTCAT 58.961 33.333 0.00 0.00 0.00 3.06
196 197 7.380536 ACATTTTCTACCACGTAACTATGTCA 58.619 34.615 0.00 0.00 0.00 3.58
197 198 7.823149 ACATTTTCTACCACGTAACTATGTC 57.177 36.000 0.00 0.00 0.00 3.06
198 199 7.874016 TGAACATTTTCTACCACGTAACTATGT 59.126 33.333 0.00 0.00 32.36 2.29
199 200 8.246908 TGAACATTTTCTACCACGTAACTATG 57.753 34.615 0.00 0.00 32.36 2.23
200 201 8.879759 CATGAACATTTTCTACCACGTAACTAT 58.120 33.333 0.00 0.00 32.36 2.12
201 202 7.332430 CCATGAACATTTTCTACCACGTAACTA 59.668 37.037 0.00 0.00 32.36 2.24
202 203 6.148811 CCATGAACATTTTCTACCACGTAACT 59.851 38.462 0.00 0.00 32.36 2.24
203 204 6.148150 TCCATGAACATTTTCTACCACGTAAC 59.852 38.462 0.00 0.00 32.36 2.50
204 205 6.231951 TCCATGAACATTTTCTACCACGTAA 58.768 36.000 0.00 0.00 32.36 3.18
205 206 5.795972 TCCATGAACATTTTCTACCACGTA 58.204 37.500 0.00 0.00 32.36 3.57
206 207 4.647611 TCCATGAACATTTTCTACCACGT 58.352 39.130 0.00 0.00 32.36 4.49
207 208 4.437390 GCTCCATGAACATTTTCTACCACG 60.437 45.833 0.00 0.00 32.36 4.94
208 209 4.437390 CGCTCCATGAACATTTTCTACCAC 60.437 45.833 0.00 0.00 32.36 4.16
209 210 3.689161 CGCTCCATGAACATTTTCTACCA 59.311 43.478 0.00 0.00 32.36 3.25
210 211 3.689649 ACGCTCCATGAACATTTTCTACC 59.310 43.478 0.00 0.00 32.36 3.18
211 212 4.631813 AGACGCTCCATGAACATTTTCTAC 59.368 41.667 0.00 0.00 32.36 2.59
212 213 4.832248 AGACGCTCCATGAACATTTTCTA 58.168 39.130 0.00 0.00 32.36 2.10
213 214 3.679389 AGACGCTCCATGAACATTTTCT 58.321 40.909 0.00 0.00 32.36 2.52
214 215 5.741388 ATAGACGCTCCATGAACATTTTC 57.259 39.130 0.00 0.00 0.00 2.29
215 216 6.112734 TGTATAGACGCTCCATGAACATTTT 58.887 36.000 0.00 0.00 0.00 1.82
216 217 5.670485 TGTATAGACGCTCCATGAACATTT 58.330 37.500 0.00 0.00 0.00 2.32
217 218 5.276461 TGTATAGACGCTCCATGAACATT 57.724 39.130 0.00 0.00 0.00 2.71
218 219 4.937201 TGTATAGACGCTCCATGAACAT 57.063 40.909 0.00 0.00 0.00 2.71
219 220 4.340950 TCATGTATAGACGCTCCATGAACA 59.659 41.667 0.00 0.00 39.02 3.18
220 221 4.871513 TCATGTATAGACGCTCCATGAAC 58.128 43.478 0.00 0.00 39.02 3.18
221 222 5.529581 TTCATGTATAGACGCTCCATGAA 57.470 39.130 8.77 8.77 45.32 2.57
222 223 5.728637 ATTCATGTATAGACGCTCCATGA 57.271 39.130 0.00 0.00 39.92 3.07
223 224 7.315890 TCTTATTCATGTATAGACGCTCCATG 58.684 38.462 0.00 0.00 35.39 3.66
224 225 7.363355 CCTCTTATTCATGTATAGACGCTCCAT 60.363 40.741 0.00 0.00 0.00 3.41
225 226 6.071896 CCTCTTATTCATGTATAGACGCTCCA 60.072 42.308 0.00 0.00 0.00 3.86
226 227 6.071840 ACCTCTTATTCATGTATAGACGCTCC 60.072 42.308 0.00 0.00 0.00 4.70
227 228 6.915349 ACCTCTTATTCATGTATAGACGCTC 58.085 40.000 0.00 0.00 0.00 5.03
228 229 6.902771 ACCTCTTATTCATGTATAGACGCT 57.097 37.500 0.00 0.00 0.00 5.07
229 230 7.371936 AGAACCTCTTATTCATGTATAGACGC 58.628 38.462 0.00 0.00 0.00 5.19
266 267 9.196139 AGTAAGTGCAGACTAAGATTCTTCTAT 57.804 33.333 1.27 0.00 0.00 1.98
267 268 8.582657 AGTAAGTGCAGACTAAGATTCTTCTA 57.417 34.615 1.27 0.00 0.00 2.10
268 269 7.475137 AGTAAGTGCAGACTAAGATTCTTCT 57.525 36.000 1.27 0.00 0.00 2.85
269 270 8.541133 AAAGTAAGTGCAGACTAAGATTCTTC 57.459 34.615 1.27 0.00 0.00 2.87
270 271 7.329717 CGAAAGTAAGTGCAGACTAAGATTCTT 59.670 37.037 4.03 4.03 0.00 2.52
271 272 6.809196 CGAAAGTAAGTGCAGACTAAGATTCT 59.191 38.462 0.00 0.00 0.00 2.40
272 273 6.586844 ACGAAAGTAAGTGCAGACTAAGATTC 59.413 38.462 0.00 0.00 46.88 2.52
273 274 6.456501 ACGAAAGTAAGTGCAGACTAAGATT 58.543 36.000 0.00 0.00 46.88 2.40
274 275 6.026947 ACGAAAGTAAGTGCAGACTAAGAT 57.973 37.500 0.00 0.00 46.88 2.40
275 276 5.449107 ACGAAAGTAAGTGCAGACTAAGA 57.551 39.130 0.00 0.00 46.88 2.10
293 294 9.947669 GAGAAAGTACATCTAATAAGCTACGAA 57.052 33.333 0.00 0.00 0.00 3.85
294 295 9.339850 AGAGAAAGTACATCTAATAAGCTACGA 57.660 33.333 0.00 0.00 0.00 3.43
295 296 9.388346 CAGAGAAAGTACATCTAATAAGCTACG 57.612 37.037 0.00 0.00 0.00 3.51
373 374 9.939802 GACCTCCTTTAAAATACTCTCTTTGTA 57.060 33.333 0.00 0.00 0.00 2.41
374 375 8.437575 TGACCTCCTTTAAAATACTCTCTTTGT 58.562 33.333 0.00 0.00 0.00 2.83
375 376 8.848474 TGACCTCCTTTAAAATACTCTCTTTG 57.152 34.615 0.00 0.00 0.00 2.77
376 377 9.508642 CTTGACCTCCTTTAAAATACTCTCTTT 57.491 33.333 0.00 0.00 0.00 2.52
377 378 7.608376 GCTTGACCTCCTTTAAAATACTCTCTT 59.392 37.037 0.00 0.00 0.00 2.85
378 379 7.037945 AGCTTGACCTCCTTTAAAATACTCTCT 60.038 37.037 0.00 0.00 0.00 3.10
379 380 7.106890 AGCTTGACCTCCTTTAAAATACTCTC 58.893 38.462 0.00 0.00 0.00 3.20
380 381 7.021998 AGCTTGACCTCCTTTAAAATACTCT 57.978 36.000 0.00 0.00 0.00 3.24
381 382 7.390718 TGAAGCTTGACCTCCTTTAAAATACTC 59.609 37.037 2.10 0.00 0.00 2.59
382 383 7.231467 TGAAGCTTGACCTCCTTTAAAATACT 58.769 34.615 2.10 0.00 0.00 2.12
383 384 7.390718 TCTGAAGCTTGACCTCCTTTAAAATAC 59.609 37.037 2.10 0.00 0.00 1.89
384 385 7.458397 TCTGAAGCTTGACCTCCTTTAAAATA 58.542 34.615 2.10 0.00 0.00 1.40
385 386 6.306987 TCTGAAGCTTGACCTCCTTTAAAAT 58.693 36.000 2.10 0.00 0.00 1.82
386 387 5.690865 TCTGAAGCTTGACCTCCTTTAAAA 58.309 37.500 2.10 0.00 0.00 1.52
387 388 5.304686 TCTGAAGCTTGACCTCCTTTAAA 57.695 39.130 2.10 0.00 0.00 1.52
388 389 4.974645 TCTGAAGCTTGACCTCCTTTAA 57.025 40.909 2.10 0.00 0.00 1.52
389 390 4.532126 TCATCTGAAGCTTGACCTCCTTTA 59.468 41.667 2.10 0.00 0.00 1.85
390 391 3.328931 TCATCTGAAGCTTGACCTCCTTT 59.671 43.478 2.10 0.00 0.00 3.11
391 392 2.909006 TCATCTGAAGCTTGACCTCCTT 59.091 45.455 2.10 0.00 0.00 3.36
392 393 2.544721 TCATCTGAAGCTTGACCTCCT 58.455 47.619 2.10 0.00 0.00 3.69
393 394 3.340814 TTCATCTGAAGCTTGACCTCC 57.659 47.619 2.10 0.00 0.00 4.30
394 395 5.182760 ACAAATTCATCTGAAGCTTGACCTC 59.817 40.000 2.10 0.00 37.48 3.85
395 396 5.048224 CACAAATTCATCTGAAGCTTGACCT 60.048 40.000 2.10 0.00 37.48 3.85
396 397 5.159209 CACAAATTCATCTGAAGCTTGACC 58.841 41.667 2.10 0.00 37.48 4.02
397 398 4.620184 GCACAAATTCATCTGAAGCTTGAC 59.380 41.667 2.10 0.00 37.48 3.18
398 399 4.614306 CGCACAAATTCATCTGAAGCTTGA 60.614 41.667 2.10 0.00 37.48 3.02
399 400 3.606777 CGCACAAATTCATCTGAAGCTTG 59.393 43.478 2.10 12.51 37.48 4.01
400 401 3.254166 ACGCACAAATTCATCTGAAGCTT 59.746 39.130 0.00 0.00 37.48 3.74
401 402 2.816087 ACGCACAAATTCATCTGAAGCT 59.184 40.909 0.00 0.00 37.48 3.74
402 403 3.207474 ACGCACAAATTCATCTGAAGC 57.793 42.857 0.00 0.00 37.48 3.86
403 404 6.110543 TGATACGCACAAATTCATCTGAAG 57.889 37.500 0.00 0.00 37.48 3.02
404 405 6.682423 ATGATACGCACAAATTCATCTGAA 57.318 33.333 0.00 0.00 38.56 3.02
405 406 6.682423 AATGATACGCACAAATTCATCTGA 57.318 33.333 0.00 0.00 0.00 3.27
406 407 7.854534 TCTAATGATACGCACAAATTCATCTG 58.145 34.615 0.00 0.00 0.00 2.90
407 408 8.501580 CATCTAATGATACGCACAAATTCATCT 58.498 33.333 0.00 0.00 0.00 2.90
408 409 7.269937 GCATCTAATGATACGCACAAATTCATC 59.730 37.037 0.00 0.00 0.00 2.92
409 410 7.080099 GCATCTAATGATACGCACAAATTCAT 58.920 34.615 0.00 0.00 0.00 2.57
410 411 6.038050 TGCATCTAATGATACGCACAAATTCA 59.962 34.615 0.00 0.00 30.04 2.57
411 412 6.358030 GTGCATCTAATGATACGCACAAATTC 59.642 38.462 13.13 0.00 44.82 2.17
412 413 6.201517 GTGCATCTAATGATACGCACAAATT 58.798 36.000 13.13 0.00 44.82 1.82
413 414 5.751680 GTGCATCTAATGATACGCACAAAT 58.248 37.500 13.13 0.00 44.82 2.32
414 415 5.155509 GTGCATCTAATGATACGCACAAA 57.844 39.130 13.13 0.00 44.82 2.83
415 416 4.794248 GTGCATCTAATGATACGCACAA 57.206 40.909 13.13 0.00 44.82 3.33
417 418 4.794248 TTGTGCATCTAATGATACGCAC 57.206 40.909 11.85 11.85 45.26 5.34
418 419 6.375945 AATTTGTGCATCTAATGATACGCA 57.624 33.333 0.00 0.00 35.41 5.24
419 420 8.955061 AATAATTTGTGCATCTAATGATACGC 57.045 30.769 0.00 0.00 0.00 4.42
451 452 9.912634 GACCATTTGAAGTCATTATTTCAAGAA 57.087 29.630 0.00 0.00 40.90 2.52
452 453 9.076781 TGACCATTTGAAGTCATTATTTCAAGA 57.923 29.630 0.00 0.00 40.90 3.02
453 454 9.350357 CTGACCATTTGAAGTCATTATTTCAAG 57.650 33.333 0.00 0.00 40.90 3.02
454 455 8.859090 ACTGACCATTTGAAGTCATTATTTCAA 58.141 29.630 0.00 0.00 41.90 2.69
455 456 8.408043 ACTGACCATTTGAAGTCATTATTTCA 57.592 30.769 0.00 0.00 41.90 2.69
456 457 9.346725 GAACTGACCATTTGAAGTCATTATTTC 57.653 33.333 0.00 0.00 41.90 2.17
457 458 8.859090 TGAACTGACCATTTGAAGTCATTATTT 58.141 29.630 0.00 0.00 41.90 1.40
458 459 8.408043 TGAACTGACCATTTGAAGTCATTATT 57.592 30.769 0.00 0.00 41.90 1.40
459 460 8.585471 ATGAACTGACCATTTGAAGTCATTAT 57.415 30.769 0.00 0.00 41.90 1.28
460 461 8.298854 CAATGAACTGACCATTTGAAGTCATTA 58.701 33.333 0.00 0.00 41.90 1.90
461 462 6.906157 ATGAACTGACCATTTGAAGTCATT 57.094 33.333 0.00 0.00 41.90 2.57
462 463 6.266103 ACAATGAACTGACCATTTGAAGTCAT 59.734 34.615 0.00 0.00 41.90 3.06
463 464 5.593909 ACAATGAACTGACCATTTGAAGTCA 59.406 36.000 0.00 0.00 40.61 3.41
464 465 6.076981 ACAATGAACTGACCATTTGAAGTC 57.923 37.500 0.00 0.00 32.40 3.01
465 466 6.469782 AACAATGAACTGACCATTTGAAGT 57.530 33.333 0.00 0.00 32.40 3.01
466 467 8.870160 TTTAACAATGAACTGACCATTTGAAG 57.130 30.769 0.00 0.00 32.40 3.02
467 468 9.829507 AATTTAACAATGAACTGACCATTTGAA 57.170 25.926 0.00 0.00 32.40 2.69
468 469 9.829507 AAATTTAACAATGAACTGACCATTTGA 57.170 25.926 0.00 0.00 32.40 2.69
472 473 8.558700 GCAAAAATTTAACAATGAACTGACCAT 58.441 29.630 0.00 0.00 0.00 3.55
473 474 7.550551 TGCAAAAATTTAACAATGAACTGACCA 59.449 29.630 0.00 0.00 0.00 4.02
474 475 7.914465 TGCAAAAATTTAACAATGAACTGACC 58.086 30.769 0.00 0.00 0.00 4.02
475 476 9.372541 CATGCAAAAATTTAACAATGAACTGAC 57.627 29.630 0.00 0.00 0.00 3.51
476 477 8.557864 CCATGCAAAAATTTAACAATGAACTGA 58.442 29.630 0.00 0.00 0.00 3.41
477 478 7.324135 GCCATGCAAAAATTTAACAATGAACTG 59.676 33.333 0.00 0.00 0.00 3.16
478 479 7.013083 TGCCATGCAAAAATTTAACAATGAACT 59.987 29.630 0.00 0.00 34.76 3.01
479 480 7.113264 GTGCCATGCAAAAATTTAACAATGAAC 59.887 33.333 0.00 0.00 41.47 3.18
480 481 7.137426 GTGCCATGCAAAAATTTAACAATGAA 58.863 30.769 0.00 0.00 41.47 2.57
481 482 6.565435 CGTGCCATGCAAAAATTTAACAATGA 60.565 34.615 0.00 0.00 41.47 2.57
482 483 5.564504 CGTGCCATGCAAAAATTTAACAATG 59.435 36.000 0.00 0.00 41.47 2.82
483 484 5.334724 CCGTGCCATGCAAAAATTTAACAAT 60.335 36.000 0.00 0.00 41.47 2.71
484 485 4.024556 CCGTGCCATGCAAAAATTTAACAA 60.025 37.500 0.00 0.00 41.47 2.83
485 486 3.496130 CCGTGCCATGCAAAAATTTAACA 59.504 39.130 0.00 0.00 41.47 2.41
486 487 3.666638 GCCGTGCCATGCAAAAATTTAAC 60.667 43.478 0.00 0.00 41.47 2.01
487 488 2.481952 GCCGTGCCATGCAAAAATTTAA 59.518 40.909 0.00 0.00 41.47 1.52
505 506 3.954258 AGGAGGGAATTTAAATTCAGCCG 59.046 43.478 31.78 0.00 45.10 5.52
507 508 6.603599 ACAGTAGGAGGGAATTTAAATTCAGC 59.396 38.462 31.78 22.37 45.10 4.26
520 521 3.632333 CTCACATGTACAGTAGGAGGGA 58.368 50.000 0.00 0.00 0.00 4.20
522 523 2.101582 GGCTCACATGTACAGTAGGAGG 59.898 54.545 0.00 0.00 0.00 4.30
523 524 2.760650 TGGCTCACATGTACAGTAGGAG 59.239 50.000 0.00 6.94 0.00 3.69
524 525 2.496070 GTGGCTCACATGTACAGTAGGA 59.504 50.000 0.00 0.00 34.08 2.94
542 543 6.851222 AATCGAACAAGCTTATAGATGTGG 57.149 37.500 0.00 0.00 0.00 4.17
574 575 8.821686 TCTGAATTTGGTGGAATATGTTATGT 57.178 30.769 0.00 0.00 0.00 2.29
586 587 6.906157 AATGCCTATATCTGAATTTGGTGG 57.094 37.500 0.00 0.00 0.00 4.61
603 604 3.256631 CAGAGCTAAACCAACAAATGCCT 59.743 43.478 0.00 0.00 0.00 4.75
605 606 3.005791 ACCAGAGCTAAACCAACAAATGC 59.994 43.478 0.00 0.00 0.00 3.56
615 616 4.773323 AATTGAGCAACCAGAGCTAAAC 57.227 40.909 0.00 0.00 43.58 2.01
623 624 6.229733 TCCCATTTAAAAATTGAGCAACCAG 58.770 36.000 0.00 0.00 0.00 4.00
640 641 6.994421 ATTACAACTCCAACTTTCCCATTT 57.006 33.333 0.00 0.00 0.00 2.32
649 650 8.267183 TGATCATGTGATATTACAACTCCAACT 58.733 33.333 4.23 0.00 34.37 3.16
813 944 3.339061 CGTGCAAGACGTATAGCCA 57.661 52.632 0.00 0.00 43.50 4.75
936 1067 3.983044 AGATGGTTACCCTCACAAGTC 57.017 47.619 9.25 0.00 0.00 3.01
937 1068 4.351111 AGAAAGATGGTTACCCTCACAAGT 59.649 41.667 9.25 0.00 0.00 3.16
938 1069 4.911390 AGAAAGATGGTTACCCTCACAAG 58.089 43.478 9.25 0.00 0.00 3.16
939 1070 4.263331 GGAGAAAGATGGTTACCCTCACAA 60.263 45.833 9.25 0.00 0.00 3.33
940 1071 3.263425 GGAGAAAGATGGTTACCCTCACA 59.737 47.826 9.25 0.00 0.00 3.58
941 1072 3.263425 TGGAGAAAGATGGTTACCCTCAC 59.737 47.826 9.25 1.09 0.00 3.51
942 1073 3.263425 GTGGAGAAAGATGGTTACCCTCA 59.737 47.826 9.25 0.00 0.00 3.86
943 1074 3.679083 CGTGGAGAAAGATGGTTACCCTC 60.679 52.174 0.00 0.00 0.00 4.30
1497 1631 1.218316 GTACCTGACGGCCCTCTTG 59.782 63.158 0.00 0.00 0.00 3.02
1532 1666 1.900545 CTCCGTCCAACCCTTCTCCC 61.901 65.000 0.00 0.00 0.00 4.30
1542 1676 3.948719 GTGCCCACCTCCGTCCAA 61.949 66.667 0.00 0.00 0.00 3.53
1830 1971 3.244009 CCAGACTCGAATCCTATGCACAT 60.244 47.826 0.00 0.00 0.00 3.21
1879 2020 8.138712 GTCTACATAGGTTGAACTATCTTCTGG 58.861 40.741 0.00 0.00 31.47 3.86
1906 2047 3.826157 AGCTGCTTTGCAATTACCTGTAA 59.174 39.130 0.00 0.00 38.41 2.41
1972 2113 1.734655 AGGGTCTGACTGTGGTTCAT 58.265 50.000 7.85 0.00 0.00 2.57
1984 2125 7.921786 TGTAGAATTATGTTTGAAGGGTCTG 57.078 36.000 0.00 0.00 0.00 3.51
2070 2377 2.994186 TATTTTGGTACGGAGGGAGC 57.006 50.000 0.00 0.00 0.00 4.70
2176 2483 1.402259 CGCCAGTTCAGACGATCTACT 59.598 52.381 0.00 0.00 0.00 2.57
2191 2498 3.624326 TGATTTTGACTTTGACGCCAG 57.376 42.857 0.00 0.00 0.00 4.85
2218 2526 7.011295 GGTTGTATGGCATTAATTTGTCAATGG 59.989 37.037 4.78 0.00 34.38 3.16
2220 2528 7.850193 AGGTTGTATGGCATTAATTTGTCAAT 58.150 30.769 4.78 0.00 34.38 2.57
2328 2636 3.244911 ACCGATGAAAACTGATGTTCCCT 60.245 43.478 0.00 0.00 34.96 4.20
2329 2637 3.081804 ACCGATGAAAACTGATGTTCCC 58.918 45.455 0.00 0.00 34.96 3.97
2330 2638 4.094442 GGTACCGATGAAAACTGATGTTCC 59.906 45.833 0.00 0.00 34.96 3.62
2331 2639 4.693566 TGGTACCGATGAAAACTGATGTTC 59.306 41.667 7.57 0.00 34.96 3.18
2332 2640 4.647611 TGGTACCGATGAAAACTGATGTT 58.352 39.130 7.57 0.00 38.16 2.71
2389 2715 7.062749 TGTATCCCACTCTATATTGTGTTCC 57.937 40.000 0.00 0.00 32.76 3.62
2390 2716 7.727181 ACTGTATCCCACTCTATATTGTGTTC 58.273 38.462 0.00 0.00 32.76 3.18
2445 2779 9.478019 CATACAGAACTTCACGTCATTAATTTC 57.522 33.333 0.00 0.00 0.00 2.17
2471 2805 6.369890 TGCTCTTAAAGATTGTGATCACACTC 59.630 38.462 29.31 29.31 46.07 3.51
2590 2976 4.940654 TGATCAAATGCGTAGGAAATGTCA 59.059 37.500 0.00 0.00 0.00 3.58
2591 2977 5.294306 TCTGATCAAATGCGTAGGAAATGTC 59.706 40.000 0.00 0.00 0.00 3.06
2614 3000 6.917533 ACAACATCATGTTCTGGAGATTTTC 58.082 36.000 0.00 0.00 38.77 2.29
2615 3001 6.906157 ACAACATCATGTTCTGGAGATTTT 57.094 33.333 0.00 0.00 38.77 1.82
2691 3164 9.638176 AAATTTTTATGAGGACTGAGCATAGAT 57.362 29.630 0.00 0.00 0.00 1.98
2717 3192 1.945394 GACTATGTCTTCGACGGCCTA 59.055 52.381 0.00 0.00 34.95 3.93
3144 3619 2.618709 GGTATGGAGTATTGGCTGCAAC 59.381 50.000 0.50 0.00 40.11 4.17
3326 3810 6.123651 AGAGTAATAGAGATTCCGTGTGTCT 58.876 40.000 0.00 0.00 0.00 3.41
3424 3908 3.751518 TCCAGGTCAGCTTTTAGGAAAC 58.248 45.455 0.00 0.00 0.00 2.78
3569 4053 3.823873 GGGTCACATTGTACATCACCAAA 59.176 43.478 0.00 0.00 0.00 3.28
3725 4209 1.228398 TTGCCAGATCGGTTGCCAA 60.228 52.632 5.66 0.00 36.97 4.52
4130 4614 1.757699 AGGCGAAGGGACAAGATCTAC 59.242 52.381 0.00 0.00 0.00 2.59
4136 4620 0.321671 TCTGAAGGCGAAGGGACAAG 59.678 55.000 0.00 0.00 0.00 3.16
4292 4777 2.934363 AAAGCTGTGTTGCCCAGGCT 62.934 55.000 10.58 0.00 42.51 4.58
4317 4802 5.755409 TTGGATGACTATTGTACACTGGT 57.245 39.130 1.73 1.73 0.00 4.00
4392 4877 7.491372 CGTGTTACATTATGATACAGGTCAACT 59.509 37.037 0.00 0.00 0.00 3.16
4451 4936 7.067372 CCATAGATGAACCAGCTGACATAAAAA 59.933 37.037 17.39 5.06 30.76 1.94
4492 4977 2.640826 TCACTTATTTTGGGACGGAGGT 59.359 45.455 0.00 0.00 0.00 3.85
4493 4978 3.007635 GTCACTTATTTTGGGACGGAGG 58.992 50.000 0.00 0.00 0.00 4.30
4494 4979 3.933332 GAGTCACTTATTTTGGGACGGAG 59.067 47.826 0.00 0.00 33.84 4.63
4495 4980 3.325425 TGAGTCACTTATTTTGGGACGGA 59.675 43.478 0.00 0.00 33.84 4.69
4496 4981 3.670625 TGAGTCACTTATTTTGGGACGG 58.329 45.455 0.00 0.00 33.84 4.79
4497 4982 4.755123 AGTTGAGTCACTTATTTTGGGACG 59.245 41.667 0.00 0.00 33.84 4.79
4498 4983 6.635030 AAGTTGAGTCACTTATTTTGGGAC 57.365 37.500 0.00 0.00 35.10 4.46
4499 4984 6.605594 ACAAAGTTGAGTCACTTATTTTGGGA 59.394 34.615 12.94 0.00 35.87 4.37
4500 4985 6.805713 ACAAAGTTGAGTCACTTATTTTGGG 58.194 36.000 12.94 0.00 35.87 4.12
4501 4986 9.965824 AATACAAAGTTGAGTCACTTATTTTGG 57.034 29.630 12.94 0.78 35.87 3.28
4505 4990 9.726438 AGCTAATACAAAGTTGAGTCACTTATT 57.274 29.630 0.00 0.90 35.87 1.40
4506 4991 9.726438 AAGCTAATACAAAGTTGAGTCACTTAT 57.274 29.630 0.00 0.00 35.87 1.73
4507 4992 9.555727 AAAGCTAATACAAAGTTGAGTCACTTA 57.444 29.630 0.00 0.00 35.87 2.24
4508 4993 8.451908 AAAGCTAATACAAAGTTGAGTCACTT 57.548 30.769 0.00 0.00 38.74 3.16
4509 4994 9.209175 CTAAAGCTAATACAAAGTTGAGTCACT 57.791 33.333 0.00 0.00 0.00 3.41
4510 4995 8.989980 ACTAAAGCTAATACAAAGTTGAGTCAC 58.010 33.333 0.00 0.00 0.00 3.67
4513 4998 9.991906 TGTACTAAAGCTAATACAAAGTTGAGT 57.008 29.630 0.00 0.00 0.00 3.41
4528 5013 9.828039 AGTTTGTACTAACTTTGTACTAAAGCT 57.172 29.630 15.68 7.77 40.44 3.74
4541 5026 9.063615 CCCAAAATAAGTGAGTTTGTACTAACT 57.936 33.333 20.40 20.40 46.31 2.24
4542 5027 9.059260 TCCCAAAATAAGTGAGTTTGTACTAAC 57.941 33.333 11.62 11.62 40.69 2.34
4543 5028 9.059260 GTCCCAAAATAAGTGAGTTTGTACTAA 57.941 33.333 0.00 0.00 40.69 2.24
4544 5029 7.385752 CGTCCCAAAATAAGTGAGTTTGTACTA 59.614 37.037 0.00 0.00 40.69 1.82
4545 5030 6.204108 CGTCCCAAAATAAGTGAGTTTGTACT 59.796 38.462 0.00 0.00 40.69 2.73
4546 5031 6.368213 CGTCCCAAAATAAGTGAGTTTGTAC 58.632 40.000 0.00 0.00 40.69 2.90
4547 5032 5.470777 CCGTCCCAAAATAAGTGAGTTTGTA 59.529 40.000 0.00 0.00 40.69 2.41
4548 5033 4.277423 CCGTCCCAAAATAAGTGAGTTTGT 59.723 41.667 0.00 0.00 40.69 2.83
4549 5034 4.517453 TCCGTCCCAAAATAAGTGAGTTTG 59.483 41.667 0.00 0.00 41.70 2.93
4550 5035 4.721132 TCCGTCCCAAAATAAGTGAGTTT 58.279 39.130 0.00 0.00 0.00 2.66
4551 5036 4.324267 CTCCGTCCCAAAATAAGTGAGTT 58.676 43.478 0.00 0.00 0.00 3.01
4552 5037 3.307480 CCTCCGTCCCAAAATAAGTGAGT 60.307 47.826 0.00 0.00 0.00 3.41
4553 5038 3.270877 CCTCCGTCCCAAAATAAGTGAG 58.729 50.000 0.00 0.00 0.00 3.51
4554 5039 2.026636 CCCTCCGTCCCAAAATAAGTGA 60.027 50.000 0.00 0.00 0.00 3.41
4555 5040 2.026636 TCCCTCCGTCCCAAAATAAGTG 60.027 50.000 0.00 0.00 0.00 3.16
4556 5041 2.238898 CTCCCTCCGTCCCAAAATAAGT 59.761 50.000 0.00 0.00 0.00 2.24
4557 5042 2.238898 ACTCCCTCCGTCCCAAAATAAG 59.761 50.000 0.00 0.00 0.00 1.73
4558 5043 2.271777 ACTCCCTCCGTCCCAAAATAA 58.728 47.619 0.00 0.00 0.00 1.40
4559 5044 1.961133 ACTCCCTCCGTCCCAAAATA 58.039 50.000 0.00 0.00 0.00 1.40
4560 5045 1.558294 GTACTCCCTCCGTCCCAAAAT 59.442 52.381 0.00 0.00 0.00 1.82
4561 5046 0.978907 GTACTCCCTCCGTCCCAAAA 59.021 55.000 0.00 0.00 0.00 2.44
4562 5047 0.115745 AGTACTCCCTCCGTCCCAAA 59.884 55.000 0.00 0.00 0.00 3.28
4563 5048 1.002069 TAGTACTCCCTCCGTCCCAA 58.998 55.000 0.00 0.00 0.00 4.12
4564 5049 1.229131 ATAGTACTCCCTCCGTCCCA 58.771 55.000 0.00 0.00 0.00 4.37
4565 5050 3.735720 ATATAGTACTCCCTCCGTCCC 57.264 52.381 0.00 0.00 0.00 4.46
4566 5051 6.491403 TGTTTAATATAGTACTCCCTCCGTCC 59.509 42.308 0.00 0.00 0.00 4.79
4567 5052 7.516198 TGTTTAATATAGTACTCCCTCCGTC 57.484 40.000 0.00 0.00 0.00 4.79
4568 5053 7.902920 TTGTTTAATATAGTACTCCCTCCGT 57.097 36.000 0.00 0.00 0.00 4.69
4569 5054 9.774413 ATTTTGTTTAATATAGTACTCCCTCCG 57.226 33.333 0.00 0.00 0.00 4.63
4632 5117 3.127425 ACTCAAGGTAACCAGAAGTGC 57.873 47.619 0.00 0.00 37.17 4.40
4637 5122 3.007182 CCGGTAAACTCAAGGTAACCAGA 59.993 47.826 0.00 0.00 35.20 3.86
4639 5124 2.038820 CCCGGTAAACTCAAGGTAACCA 59.961 50.000 0.00 0.00 35.20 3.67
4640 5125 2.038952 ACCCGGTAAACTCAAGGTAACC 59.961 50.000 0.00 0.00 33.34 2.85
4643 5128 2.328319 ACACCCGGTAAACTCAAGGTA 58.672 47.619 0.00 0.00 0.00 3.08
4648 5133 4.420522 AGTTTAACACCCGGTAAACTCA 57.579 40.909 17.70 0.00 38.03 3.41
4658 5143 4.401202 CCCACATCCAATAGTTTAACACCC 59.599 45.833 0.00 0.00 0.00 4.61
4721 5217 5.404466 AGTTGCAATAATTTGGCTAGCAA 57.596 34.783 18.24 0.85 38.07 3.91
4723 5219 4.363138 GGAGTTGCAATAATTTGGCTAGC 58.637 43.478 6.04 6.04 33.22 3.42
4812 5312 1.741145 ACCGTAATCAACCAAATCCGC 59.259 47.619 0.00 0.00 0.00 5.54
4820 5320 2.541588 GCATGCATGACCGTAATCAACC 60.542 50.000 30.64 3.61 30.82 3.77
4862 5362 3.310774 CGAAACCTGATCATGTGTCCATC 59.689 47.826 13.79 4.30 0.00 3.51
4911 5411 3.244146 GCAGTAGCAGATCATCCATGACT 60.244 47.826 0.00 0.00 39.20 3.41
4959 5459 5.221986 CCTCCAACATTGATCATCAGGGATA 60.222 44.000 0.00 0.00 0.00 2.59
5021 5521 1.270550 GTGACCTTCATTGTTGCTGGG 59.729 52.381 0.00 0.00 0.00 4.45
5037 5538 1.201429 ACCACCTCCTCCCATGTGAC 61.201 60.000 0.00 0.00 0.00 3.67
5070 5571 0.038166 TCCCATGAAGGCCAGTTGAC 59.962 55.000 5.01 0.00 35.39 3.18
5074 5575 2.679716 GCTCCCATGAAGGCCAGT 59.320 61.111 5.01 0.00 35.39 4.00
5092 5593 3.356290 CCCAATGAAGGGTTTACTCCAG 58.644 50.000 0.00 0.00 44.24 3.86


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.