Multiple sequence alignment - TraesCS2B01G280000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G280000 chr2B 100.000 4228 0 0 1 4228 386284961 386289188 0.000000e+00 7808.0
1 TraesCS2B01G280000 chr2B 88.710 62 5 2 1358 1417 726688941 726689002 1.630000e-09 75.0
2 TraesCS2B01G280000 chr2D 93.582 2088 80 17 1614 3694 318323836 318325876 0.000000e+00 3064.0
3 TraesCS2B01G280000 chr2D 90.491 1651 98 24 1 1611 318322173 318323804 0.000000e+00 2124.0
4 TraesCS2B01G280000 chr2A 94.919 1732 65 10 2033 3751 413337863 413336142 0.000000e+00 2689.0
5 TraesCS2B01G280000 chr2A 93.716 907 44 7 473 1371 413339518 413338617 0.000000e+00 1347.0
6 TraesCS2B01G280000 chr2A 86.957 483 35 8 1412 1866 413338614 413338132 6.270000e-143 518.0
7 TraesCS2B01G280000 chr2A 89.125 423 14 7 1616 2034 413338380 413337986 8.160000e-137 497.0
8 TraesCS2B01G280000 chr2A 81.818 495 63 11 1 469 413341291 413340798 1.430000e-104 390.0
9 TraesCS2B01G280000 chr2A 97.368 38 1 0 3778 3815 413336093 413336056 9.810000e-07 65.8
10 TraesCS2B01G280000 chr5B 91.781 292 22 2 3938 4228 524328402 524328692 5.090000e-109 405.0
11 TraesCS2B01G280000 chr1A 94.643 56 1 2 1367 1420 13315350 13315405 7.530000e-13 86.1
12 TraesCS2B01G280000 chr7A 94.444 54 2 1 1368 1420 628840004 628840057 9.740000e-12 82.4
13 TraesCS2B01G280000 chr4D 96.000 50 2 0 1370 1419 77121830 77121781 9.740000e-12 82.4
14 TraesCS2B01G280000 chr7D 94.340 53 1 2 1370 1420 168580862 168580914 3.500000e-11 80.5
15 TraesCS2B01G280000 chr5D 94.340 53 1 2 1370 1420 494775529 494775477 3.500000e-11 80.5
16 TraesCS2B01G280000 chr3A 92.982 57 1 3 1366 1420 7457503 7457448 3.500000e-11 80.5
17 TraesCS2B01G280000 chr3A 92.982 57 1 3 1366 1420 7464048 7463993 3.500000e-11 80.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G280000 chr2B 386284961 386289188 4227 False 7808.0 7808 100.0000 1 4228 1 chr2B.!!$F1 4227
1 TraesCS2B01G280000 chr2D 318322173 318325876 3703 False 2594.0 3064 92.0365 1 3694 2 chr2D.!!$F1 3693
2 TraesCS2B01G280000 chr2A 413336056 413341291 5235 True 917.8 2689 90.6505 1 3815 6 chr2A.!!$R1 3814

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
113 115 0.608035 TTGCCCCTCGGTGATTTCAC 60.608 55.0 1.99 1.99 45.72 3.18 F
201 204 0.618981 AGGGGAAAAGGTCCTAAGCG 59.381 55.0 0.00 0.00 46.92 4.68 F
1299 2627 0.243636 CGCGATTTGCCTTCCCTTTT 59.756 50.0 0.00 0.00 42.08 2.27 F
1640 2998 0.527565 CAAGGAGCAACAATTCCCCG 59.472 55.0 0.00 0.00 33.83 5.73 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1101 2428 0.032952 AGTTGAACAGCGCCGACTAA 59.967 50.0 2.29 0.0 0.00 2.24 R
1621 2979 0.527565 CGGGGAATTGTTGCTCCTTG 59.472 55.0 0.00 0.0 31.88 3.61 R
2808 4296 0.909133 TCCACATGACAGCTAGGGCA 60.909 55.0 0.00 0.0 41.70 5.36 R
3392 4893 0.950555 TGCAACGACCTGAGTGCATC 60.951 55.0 0.00 0.0 0.00 3.91 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
99 101 6.878389 TCAATGAAAACTGGATTTATTTGCCC 59.122 34.615 0.00 0.00 0.00 5.36
113 115 0.608035 TTGCCCCTCGGTGATTTCAC 60.608 55.000 1.99 1.99 45.72 3.18
201 204 0.618981 AGGGGAAAAGGTCCTAAGCG 59.381 55.000 0.00 0.00 46.92 4.68
211 214 0.796927 GTCCTAAGCGTTGTTGGAGC 59.203 55.000 0.00 0.00 0.00 4.70
222 225 2.813754 GTTGTTGGAGCAGCAACTATCA 59.186 45.455 0.00 0.00 46.68 2.15
235 258 2.649331 ACTATCACCGTGGAAAGTCG 57.351 50.000 0.00 0.00 0.00 4.18
286 312 5.024768 CAACAACCGTTGTCGATTAATCA 57.975 39.130 17.11 0.39 46.20 2.57
287 313 5.627172 CAACAACCGTTGTCGATTAATCAT 58.373 37.500 17.11 0.00 46.20 2.45
288 314 6.767080 CAACAACCGTTGTCGATTAATCATA 58.233 36.000 17.11 0.03 46.20 2.15
301 327 7.262772 TCGATTAATCATACGACAACCTCTTT 58.737 34.615 15.57 0.00 0.00 2.52
302 328 7.762615 TCGATTAATCATACGACAACCTCTTTT 59.237 33.333 15.57 0.00 0.00 2.27
303 329 8.388103 CGATTAATCATACGACAACCTCTTTTT 58.612 33.333 15.57 0.00 0.00 1.94
306 332 7.687941 AATCATACGACAACCTCTTTTTGAT 57.312 32.000 0.00 0.00 0.00 2.57
332 358 1.689813 TCTTCACCCGCACAGAAACTA 59.310 47.619 0.00 0.00 0.00 2.24
364 391 1.279025 TGGTCCTTAGGTGCATCCCC 61.279 60.000 0.00 0.00 36.75 4.81
385 412 4.195308 GGCAACGTCGGCTATTCA 57.805 55.556 11.34 0.00 0.00 2.57
466 493 2.551721 CCACATGAGGGATGACTATGGC 60.552 54.545 0.00 0.00 35.80 4.40
514 1817 4.838152 ATCGGCAGGCGCGTTGAT 62.838 61.111 12.43 8.70 39.92 2.57
757 2067 6.702716 TTTTAGGGTTAGTGTTGGAGTTTG 57.297 37.500 0.00 0.00 0.00 2.93
761 2071 5.757988 AGGGTTAGTGTTGGAGTTTGTTTA 58.242 37.500 0.00 0.00 0.00 2.01
764 2074 7.343574 AGGGTTAGTGTTGGAGTTTGTTTATTT 59.656 33.333 0.00 0.00 0.00 1.40
937 2264 2.144078 CAAACCCCAACCCCAACCC 61.144 63.158 0.00 0.00 0.00 4.11
938 2265 3.413915 AAACCCCAACCCCAACCCC 62.414 63.158 0.00 0.00 0.00 4.95
940 2267 3.851184 CCCCAACCCCAACCCCAA 61.851 66.667 0.00 0.00 0.00 4.12
941 2268 2.203773 CCCAACCCCAACCCCAAG 60.204 66.667 0.00 0.00 0.00 3.61
942 2269 2.922503 CCAACCCCAACCCCAAGC 60.923 66.667 0.00 0.00 0.00 4.01
1037 2364 2.490217 CCCGCGTCGAACTCATCT 59.510 61.111 4.92 0.00 0.00 2.90
1289 2617 2.089734 CGATCTGATCTACGCGATTTGC 59.910 50.000 15.93 0.00 41.47 3.68
1293 2621 2.201732 TGATCTACGCGATTTGCCTTC 58.798 47.619 15.93 0.00 42.08 3.46
1298 2626 0.893727 ACGCGATTTGCCTTCCCTTT 60.894 50.000 15.93 0.00 42.08 3.11
1299 2627 0.243636 CGCGATTTGCCTTCCCTTTT 59.756 50.000 0.00 0.00 42.08 2.27
1336 2664 4.495422 AGGCAAATAGTCGTACTGTCAAG 58.505 43.478 0.00 0.00 0.00 3.02
1344 2672 3.119673 AGTCGTACTGTCAAGATCAGCAG 60.120 47.826 0.00 0.03 36.50 4.24
1493 2821 2.158385 TGTTGGGTCTAGGGCATTTTGT 60.158 45.455 0.00 0.00 0.00 2.83
1503 2831 4.703379 AGGGCATTTTGTTTTTGATCCA 57.297 36.364 0.00 0.00 0.00 3.41
1508 2836 7.723172 AGGGCATTTTGTTTTTGATCCATAAAA 59.277 29.630 0.00 0.00 0.00 1.52
1509 2837 8.022550 GGGCATTTTGTTTTTGATCCATAAAAG 58.977 33.333 0.00 0.00 0.00 2.27
1555 2883 1.200948 GTTCAGAGCTGATTGCAACCC 59.799 52.381 0.00 0.00 45.94 4.11
1582 2910 5.662674 ATCCTATAGTCGGATTAAGCACC 57.337 43.478 0.00 0.00 38.05 5.01
1611 2939 3.555966 AGAACTGTGAAACTCCCCTTTG 58.444 45.455 0.00 0.00 38.04 2.77
1621 2979 3.397849 ACTCCCCTTTGTAAACTCGAC 57.602 47.619 0.00 0.00 0.00 4.20
1632 2990 2.325583 AAACTCGACAAGGAGCAACA 57.674 45.000 0.00 0.00 37.57 3.33
1639 2997 1.546029 GACAAGGAGCAACAATTCCCC 59.454 52.381 0.00 0.00 33.83 4.81
1640 2998 0.527565 CAAGGAGCAACAATTCCCCG 59.472 55.000 0.00 0.00 33.83 5.73
1650 3008 4.261867 GCAACAATTCCCCGAAAAAGTAGT 60.262 41.667 0.00 0.00 0.00 2.73
1651 3009 5.048573 GCAACAATTCCCCGAAAAAGTAGTA 60.049 40.000 0.00 0.00 0.00 1.82
1652 3010 6.608610 CAACAATTCCCCGAAAAAGTAGTAG 58.391 40.000 0.00 0.00 0.00 2.57
1680 3038 8.270744 AGAAAGATAAGGAACAAGATATGCAGT 58.729 33.333 0.00 0.00 0.00 4.40
1814 3173 8.081633 TGAATCTGAATAAAAGCATGTTTCGTT 58.918 29.630 0.00 0.00 0.00 3.85
1864 3223 5.804692 TTGCAAGAAGTTTAGTCAACGAA 57.195 34.783 0.00 0.00 40.75 3.85
2012 3374 4.521146 AGGTCCTCAATGCTATTTGTCAG 58.479 43.478 0.00 0.00 0.00 3.51
2017 3379 5.587443 TCCTCAATGCTATTTGTCAGTGATG 59.413 40.000 0.00 0.00 36.82 3.07
2025 3387 2.070262 TTGTCAGTGATGTCTCTGCG 57.930 50.000 0.00 0.00 37.38 5.18
2085 3571 5.385198 AGATTTCAAAAGCACAGGGTTCTA 58.615 37.500 0.00 0.00 32.58 2.10
2199 3686 4.749099 CAGAATAGGTATGCTTCTGTCTGC 59.251 45.833 3.88 0.00 40.50 4.26
2202 3689 0.740868 GGTATGCTTCTGTCTGCGCA 60.741 55.000 10.98 10.98 36.75 6.09
2218 3705 1.133790 GCGCATCCAGCTCAAATTCTT 59.866 47.619 0.30 0.00 42.61 2.52
2269 3756 5.734503 GCTGCATATTTCCTAGTTCCTTTGC 60.735 44.000 0.00 0.00 0.00 3.68
2361 3848 7.129457 TGTAGACATTAGCTGAGGAATCAAT 57.871 36.000 0.00 0.00 0.00 2.57
2535 4023 5.755409 TTAGAACAGGGTGCAATCTCTAA 57.245 39.130 0.00 0.00 0.00 2.10
2669 4157 8.682936 AAATACCTACATTGAGAAATAGCTGG 57.317 34.615 0.00 0.00 0.00 4.85
2763 4251 7.167968 CCAGTGACAATCAACTACAATTTGTTG 59.832 37.037 7.45 8.36 43.28 3.33
2798 4286 8.945195 TCTATATATTAGGGGAAACTCGTGAA 57.055 34.615 0.00 0.00 34.16 3.18
2808 4296 5.176592 GGGAAACTCGTGAAGTAAAGCTAT 58.823 41.667 0.00 0.00 37.17 2.97
2810 4298 5.446073 GGAAACTCGTGAAGTAAAGCTATGC 60.446 44.000 0.00 0.00 37.17 3.14
2863 4351 4.282703 AGCATTGGTTTCTGCTTTCTGATT 59.717 37.500 0.00 0.00 46.22 2.57
3052 4552 6.646240 GGTGTGTCAAACTTATGCAATGAAAT 59.354 34.615 0.00 0.00 0.00 2.17
3128 4629 5.786311 CATCCTTTTCATTTCAAGCCTTCA 58.214 37.500 0.00 0.00 0.00 3.02
3238 4739 1.136329 TTCTTCTGAAGGCCTGGGCT 61.136 55.000 18.27 18.27 41.24 5.19
3332 4833 0.255318 ATGCCTCCAGAGAAGCCTTG 59.745 55.000 0.00 0.00 0.00 3.61
3392 4893 1.224075 CGAGCATGCAGGTTAGATGG 58.776 55.000 21.98 0.00 0.00 3.51
3407 4908 0.176680 GATGGATGCACTCAGGTCGT 59.823 55.000 0.00 0.00 0.00 4.34
3417 4918 0.882042 CTCAGGTCGTTGCACTTGCT 60.882 55.000 2.33 0.00 42.66 3.91
3529 5030 0.168128 GTTCGGATCCTGCAAAACCG 59.832 55.000 10.75 10.21 44.09 4.44
3531 5032 0.251916 TCGGATCCTGCAAAACCGAT 59.748 50.000 10.75 0.00 45.87 4.18
3665 5166 6.605471 AATAAAATTTCCCAGTGAACCTCC 57.395 37.500 0.00 0.00 31.05 4.30
3725 5226 1.623359 GTCAGAGCGTGCTAGACTTG 58.377 55.000 15.62 2.89 32.14 3.16
3729 5230 0.737715 GAGCGTGCTAGACTTGGGTG 60.738 60.000 0.00 0.00 0.00 4.61
3769 5297 5.776173 TTGAACGCCTCAAATTCCTTTTA 57.224 34.783 0.00 0.00 41.21 1.52
3770 5298 5.975693 TGAACGCCTCAAATTCCTTTTAT 57.024 34.783 0.00 0.00 0.00 1.40
3771 5299 7.455641 TTGAACGCCTCAAATTCCTTTTATA 57.544 32.000 0.00 0.00 41.21 0.98
3772 5300 7.639113 TGAACGCCTCAAATTCCTTTTATAT 57.361 32.000 0.00 0.00 0.00 0.86
3773 5301 7.479980 TGAACGCCTCAAATTCCTTTTATATG 58.520 34.615 0.00 0.00 0.00 1.78
3774 5302 5.831997 ACGCCTCAAATTCCTTTTATATGC 58.168 37.500 0.00 0.00 0.00 3.14
3775 5303 5.221244 ACGCCTCAAATTCCTTTTATATGCC 60.221 40.000 0.00 0.00 0.00 4.40
3776 5304 5.541845 GCCTCAAATTCCTTTTATATGCCC 58.458 41.667 0.00 0.00 0.00 5.36
3780 5308 1.989706 TTCCTTTTATATGCCCGGCC 58.010 50.000 7.03 0.00 0.00 6.13
3815 5343 0.798776 GTCAGTGCTCAAATCCCACG 59.201 55.000 0.00 0.00 34.79 4.94
3816 5344 0.321564 TCAGTGCTCAAATCCCACGG 60.322 55.000 0.00 0.00 34.79 4.94
3817 5345 1.002134 AGTGCTCAAATCCCACGGG 60.002 57.895 0.00 0.00 34.79 5.28
3818 5346 2.361104 TGCTCAAATCCCACGGGC 60.361 61.111 0.00 0.00 34.68 6.13
3819 5347 3.508840 GCTCAAATCCCACGGGCG 61.509 66.667 0.00 0.00 34.68 6.13
3820 5348 2.824041 CTCAAATCCCACGGGCGG 60.824 66.667 0.00 0.00 34.68 6.13
3821 5349 3.323286 TCAAATCCCACGGGCGGA 61.323 61.111 0.00 0.00 34.68 5.54
3822 5350 3.131478 CAAATCCCACGGGCGGAC 61.131 66.667 0.00 0.00 34.68 4.79
3823 5351 3.642503 AAATCCCACGGGCGGACA 61.643 61.111 0.00 0.00 34.68 4.02
3824 5352 3.622060 AAATCCCACGGGCGGACAG 62.622 63.158 0.00 0.00 34.68 3.51
3834 5362 4.225497 GCGGACAGCTTGGCTAAT 57.775 55.556 0.00 0.00 44.04 1.73
3835 5363 2.017752 GCGGACAGCTTGGCTAATC 58.982 57.895 0.00 0.00 44.04 1.75
3836 5364 1.766143 GCGGACAGCTTGGCTAATCG 61.766 60.000 0.00 0.00 44.04 3.34
3837 5365 0.460284 CGGACAGCTTGGCTAATCGT 60.460 55.000 0.00 0.00 36.40 3.73
3838 5366 1.009829 GGACAGCTTGGCTAATCGTG 58.990 55.000 0.00 0.00 36.40 4.35
3839 5367 1.405526 GGACAGCTTGGCTAATCGTGA 60.406 52.381 0.00 0.00 36.40 4.35
3840 5368 2.346803 GACAGCTTGGCTAATCGTGAA 58.653 47.619 0.00 0.00 36.40 3.18
3841 5369 2.742053 GACAGCTTGGCTAATCGTGAAA 59.258 45.455 0.00 0.00 36.40 2.69
3842 5370 3.146066 ACAGCTTGGCTAATCGTGAAAA 58.854 40.909 0.00 0.00 36.40 2.29
3843 5371 3.758554 ACAGCTTGGCTAATCGTGAAAAT 59.241 39.130 0.00 0.00 36.40 1.82
3844 5372 4.941263 ACAGCTTGGCTAATCGTGAAAATA 59.059 37.500 0.00 0.00 36.40 1.40
3845 5373 5.590259 ACAGCTTGGCTAATCGTGAAAATAT 59.410 36.000 0.00 0.00 36.40 1.28
3846 5374 5.911280 CAGCTTGGCTAATCGTGAAAATATG 59.089 40.000 0.00 0.00 36.40 1.78
3847 5375 5.822519 AGCTTGGCTAATCGTGAAAATATGA 59.177 36.000 0.00 0.00 36.99 2.15
3848 5376 5.909610 GCTTGGCTAATCGTGAAAATATGAC 59.090 40.000 0.00 0.00 0.00 3.06
3849 5377 6.371809 TTGGCTAATCGTGAAAATATGACC 57.628 37.500 0.00 0.00 0.00 4.02
3850 5378 4.819630 TGGCTAATCGTGAAAATATGACCC 59.180 41.667 0.00 0.00 0.00 4.46
3851 5379 4.819630 GGCTAATCGTGAAAATATGACCCA 59.180 41.667 0.00 0.00 0.00 4.51
3852 5380 5.298276 GGCTAATCGTGAAAATATGACCCAA 59.702 40.000 0.00 0.00 0.00 4.12
3853 5381 6.199393 GCTAATCGTGAAAATATGACCCAAC 58.801 40.000 0.00 0.00 0.00 3.77
3854 5382 5.576447 AATCGTGAAAATATGACCCAACC 57.424 39.130 0.00 0.00 0.00 3.77
3855 5383 4.295141 TCGTGAAAATATGACCCAACCT 57.705 40.909 0.00 0.00 0.00 3.50
3856 5384 4.258543 TCGTGAAAATATGACCCAACCTC 58.741 43.478 0.00 0.00 0.00 3.85
3857 5385 3.063452 CGTGAAAATATGACCCAACCTCG 59.937 47.826 0.00 0.00 0.00 4.63
3858 5386 4.258543 GTGAAAATATGACCCAACCTCGA 58.741 43.478 0.00 0.00 0.00 4.04
3859 5387 4.698304 GTGAAAATATGACCCAACCTCGAA 59.302 41.667 0.00 0.00 0.00 3.71
3860 5388 4.698304 TGAAAATATGACCCAACCTCGAAC 59.302 41.667 0.00 0.00 0.00 3.95
3861 5389 3.277142 AATATGACCCAACCTCGAACC 57.723 47.619 0.00 0.00 0.00 3.62
3862 5390 0.906775 TATGACCCAACCTCGAACCC 59.093 55.000 0.00 0.00 0.00 4.11
3863 5391 1.131303 ATGACCCAACCTCGAACCCA 61.131 55.000 0.00 0.00 0.00 4.51
3864 5392 1.003718 GACCCAACCTCGAACCCAG 60.004 63.158 0.00 0.00 0.00 4.45
3865 5393 1.460689 ACCCAACCTCGAACCCAGA 60.461 57.895 0.00 0.00 0.00 3.86
3866 5394 1.057851 ACCCAACCTCGAACCCAGAA 61.058 55.000 0.00 0.00 0.00 3.02
3867 5395 0.605589 CCCAACCTCGAACCCAGAAC 60.606 60.000 0.00 0.00 0.00 3.01
3868 5396 0.107831 CCAACCTCGAACCCAGAACA 59.892 55.000 0.00 0.00 0.00 3.18
3869 5397 1.271379 CCAACCTCGAACCCAGAACAT 60.271 52.381 0.00 0.00 0.00 2.71
3870 5398 2.027561 CCAACCTCGAACCCAGAACATA 60.028 50.000 0.00 0.00 0.00 2.29
3871 5399 3.370527 CCAACCTCGAACCCAGAACATAT 60.371 47.826 0.00 0.00 0.00 1.78
3872 5400 4.261801 CAACCTCGAACCCAGAACATATT 58.738 43.478 0.00 0.00 0.00 1.28
3873 5401 4.569719 ACCTCGAACCCAGAACATATTT 57.430 40.909 0.00 0.00 0.00 1.40
3874 5402 4.261801 ACCTCGAACCCAGAACATATTTG 58.738 43.478 0.00 0.00 0.00 2.32
3875 5403 3.627577 CCTCGAACCCAGAACATATTTGG 59.372 47.826 0.00 0.00 0.00 3.28
3880 5408 2.034124 CCCAGAACATATTTGGGCAGG 58.966 52.381 0.00 0.00 44.63 4.85
3881 5409 2.624029 CCCAGAACATATTTGGGCAGGT 60.624 50.000 0.00 0.00 44.63 4.00
3882 5410 3.099141 CCAGAACATATTTGGGCAGGTT 58.901 45.455 0.00 0.00 0.00 3.50
3883 5411 3.131046 CCAGAACATATTTGGGCAGGTTC 59.869 47.826 0.00 0.00 35.95 3.62
3884 5412 4.019174 CAGAACATATTTGGGCAGGTTCT 58.981 43.478 0.00 0.00 43.99 3.01
3885 5413 4.463891 CAGAACATATTTGGGCAGGTTCTT 59.536 41.667 0.00 0.00 42.00 2.52
3886 5414 4.706962 AGAACATATTTGGGCAGGTTCTTC 59.293 41.667 0.00 0.00 41.36 2.87
3887 5415 4.046286 ACATATTTGGGCAGGTTCTTCA 57.954 40.909 0.00 0.00 0.00 3.02
3888 5416 4.415596 ACATATTTGGGCAGGTTCTTCAA 58.584 39.130 0.00 0.00 0.00 2.69
3889 5417 5.025453 ACATATTTGGGCAGGTTCTTCAAT 58.975 37.500 0.00 0.00 0.00 2.57
3890 5418 5.127682 ACATATTTGGGCAGGTTCTTCAATC 59.872 40.000 0.00 0.00 0.00 2.67
3891 5419 2.978156 TTGGGCAGGTTCTTCAATCT 57.022 45.000 0.00 0.00 0.00 2.40
3892 5420 2.205022 TGGGCAGGTTCTTCAATCTG 57.795 50.000 0.00 0.00 42.95 2.90
3896 5424 2.888513 CAGGTTCTTCAATCTGCGTG 57.111 50.000 0.00 0.00 33.89 5.34
3897 5425 2.416747 CAGGTTCTTCAATCTGCGTGA 58.583 47.619 0.00 0.00 33.89 4.35
3898 5426 2.414481 CAGGTTCTTCAATCTGCGTGAG 59.586 50.000 0.00 0.00 33.89 3.51
3936 5464 2.202892 GGCGACCAGGGATCGAAC 60.203 66.667 3.65 0.00 42.25 3.95
3937 5465 2.202892 GCGACCAGGGATCGAACC 60.203 66.667 2.47 2.47 42.25 3.62
3938 5466 2.722201 GCGACCAGGGATCGAACCT 61.722 63.158 11.90 8.93 42.25 3.50
3944 5472 2.596776 AGGGATCGAACCTGTCAGG 58.403 57.895 17.88 17.88 42.49 3.86
3945 5473 0.041238 AGGGATCGAACCTGTCAGGA 59.959 55.000 26.18 2.86 37.67 3.86
3946 5474 0.175989 GGGATCGAACCTGTCAGGAC 59.824 60.000 26.18 16.47 37.67 3.85
3947 5475 0.175989 GGATCGAACCTGTCAGGACC 59.824 60.000 26.18 14.36 37.67 4.46
3948 5476 1.187087 GATCGAACCTGTCAGGACCT 58.813 55.000 26.18 9.13 37.67 3.85
3949 5477 0.898320 ATCGAACCTGTCAGGACCTG 59.102 55.000 26.18 15.99 37.67 4.00
3950 5478 0.178973 TCGAACCTGTCAGGACCTGA 60.179 55.000 26.18 20.74 37.67 3.86
3951 5479 0.679505 CGAACCTGTCAGGACCTGAA 59.320 55.000 25.93 14.56 42.46 3.02
3952 5480 1.605712 CGAACCTGTCAGGACCTGAAC 60.606 57.143 25.93 18.84 42.46 3.18
3953 5481 0.765510 AACCTGTCAGGACCTGAACC 59.234 55.000 25.93 14.85 42.46 3.62
3954 5482 0.104934 ACCTGTCAGGACCTGAACCT 60.105 55.000 25.93 6.12 42.46 3.50
3955 5483 0.610687 CCTGTCAGGACCTGAACCTC 59.389 60.000 25.93 13.77 42.46 3.85
3956 5484 0.244994 CTGTCAGGACCTGAACCTCG 59.755 60.000 25.93 8.75 42.46 4.63
3957 5485 1.079750 GTCAGGACCTGAACCTCGC 60.080 63.158 25.93 8.72 42.46 5.03
3958 5486 1.228894 TCAGGACCTGAACCTCGCT 60.229 57.895 22.30 0.00 37.57 4.93
3959 5487 1.079543 CAGGACCTGAACCTCGCTG 60.080 63.158 17.22 0.00 35.35 5.18
3960 5488 1.534235 AGGACCTGAACCTCGCTGT 60.534 57.895 0.00 0.00 31.43 4.40
3961 5489 1.122019 AGGACCTGAACCTCGCTGTT 61.122 55.000 0.00 0.00 31.43 3.16
3962 5490 0.606604 GGACCTGAACCTCGCTGTTA 59.393 55.000 0.00 0.00 0.00 2.41
3963 5491 1.672145 GGACCTGAACCTCGCTGTTAC 60.672 57.143 0.00 0.00 0.00 2.50
3964 5492 1.272769 GACCTGAACCTCGCTGTTACT 59.727 52.381 0.00 0.00 0.00 2.24
3965 5493 1.000955 ACCTGAACCTCGCTGTTACTG 59.999 52.381 0.00 0.00 0.00 2.74
3966 5494 1.272490 CCTGAACCTCGCTGTTACTGA 59.728 52.381 0.00 0.00 0.00 3.41
3967 5495 2.288825 CCTGAACCTCGCTGTTACTGAA 60.289 50.000 0.00 0.00 0.00 3.02
3968 5496 2.989840 CTGAACCTCGCTGTTACTGAAG 59.010 50.000 0.00 0.00 0.00 3.02
3969 5497 2.626266 TGAACCTCGCTGTTACTGAAGA 59.374 45.455 0.00 0.00 0.00 2.87
3970 5498 3.069016 TGAACCTCGCTGTTACTGAAGAA 59.931 43.478 0.00 0.00 0.00 2.52
3971 5499 3.746045 ACCTCGCTGTTACTGAAGAAA 57.254 42.857 0.00 0.00 0.00 2.52
3972 5500 3.654414 ACCTCGCTGTTACTGAAGAAAG 58.346 45.455 0.00 0.00 0.00 2.62
3973 5501 3.321111 ACCTCGCTGTTACTGAAGAAAGA 59.679 43.478 0.00 0.00 0.00 2.52
3974 5502 4.202223 ACCTCGCTGTTACTGAAGAAAGAA 60.202 41.667 0.00 0.00 0.00 2.52
3975 5503 4.387256 CCTCGCTGTTACTGAAGAAAGAAG 59.613 45.833 0.00 0.00 0.00 2.85
3976 5504 5.196341 TCGCTGTTACTGAAGAAAGAAGA 57.804 39.130 0.00 0.00 0.00 2.87
3977 5505 4.982916 TCGCTGTTACTGAAGAAAGAAGAC 59.017 41.667 0.00 0.00 0.00 3.01
3978 5506 4.143514 CGCTGTTACTGAAGAAAGAAGACG 60.144 45.833 0.00 0.00 0.00 4.18
3979 5507 4.982916 GCTGTTACTGAAGAAAGAAGACGA 59.017 41.667 0.00 0.00 0.00 4.20
3980 5508 5.107798 GCTGTTACTGAAGAAAGAAGACGAC 60.108 44.000 0.00 0.00 0.00 4.34
3981 5509 4.974275 TGTTACTGAAGAAAGAAGACGACG 59.026 41.667 0.00 0.00 0.00 5.12
3982 5510 2.395654 ACTGAAGAAAGAAGACGACGC 58.604 47.619 0.00 0.00 0.00 5.19
3983 5511 2.223735 ACTGAAGAAAGAAGACGACGCA 60.224 45.455 0.00 0.00 0.00 5.24
3984 5512 2.794910 CTGAAGAAAGAAGACGACGCAA 59.205 45.455 0.00 0.00 0.00 4.85
3986 5514 2.795175 AGAAAGAAGACGACGCAAGA 57.205 45.000 0.00 0.00 43.62 3.02
3987 5515 2.395654 AGAAAGAAGACGACGCAAGAC 58.604 47.619 0.00 0.00 43.62 3.01
3988 5516 2.124903 GAAAGAAGACGACGCAAGACA 58.875 47.619 0.00 0.00 43.62 3.41
3989 5517 2.218953 AAGAAGACGACGCAAGACAA 57.781 45.000 0.00 0.00 43.62 3.18
3990 5518 1.772182 AGAAGACGACGCAAGACAAG 58.228 50.000 0.00 0.00 43.62 3.16
3991 5519 1.067212 AGAAGACGACGCAAGACAAGT 59.933 47.619 0.00 0.00 43.62 3.16
3992 5520 1.859080 GAAGACGACGCAAGACAAGTT 59.141 47.619 0.00 0.00 43.62 2.66
3993 5521 1.488527 AGACGACGCAAGACAAGTTC 58.511 50.000 0.00 0.00 43.62 3.01
3994 5522 1.202371 AGACGACGCAAGACAAGTTCA 60.202 47.619 0.00 0.00 43.62 3.18
3995 5523 1.190323 GACGACGCAAGACAAGTTCAG 59.810 52.381 0.00 0.00 43.62 3.02
3996 5524 1.209128 CGACGCAAGACAAGTTCAGT 58.791 50.000 0.00 0.00 43.62 3.41
3997 5525 1.593006 CGACGCAAGACAAGTTCAGTT 59.407 47.619 0.00 0.00 43.62 3.16
3998 5526 2.792674 CGACGCAAGACAAGTTCAGTTA 59.207 45.455 0.00 0.00 43.62 2.24
3999 5527 3.428870 CGACGCAAGACAAGTTCAGTTAT 59.571 43.478 0.00 0.00 43.62 1.89
4000 5528 4.433022 CGACGCAAGACAAGTTCAGTTATC 60.433 45.833 0.00 0.00 43.62 1.75
4001 5529 3.746492 ACGCAAGACAAGTTCAGTTATCC 59.254 43.478 0.00 0.00 43.62 2.59
4002 5530 3.745975 CGCAAGACAAGTTCAGTTATCCA 59.254 43.478 0.00 0.00 43.02 3.41
4003 5531 4.213270 CGCAAGACAAGTTCAGTTATCCAA 59.787 41.667 0.00 0.00 43.02 3.53
4004 5532 5.452777 GCAAGACAAGTTCAGTTATCCAAC 58.547 41.667 0.00 0.00 34.67 3.77
4005 5533 5.008613 GCAAGACAAGTTCAGTTATCCAACA 59.991 40.000 0.00 0.00 37.10 3.33
4006 5534 6.662616 CAAGACAAGTTCAGTTATCCAACAG 58.337 40.000 0.00 0.00 37.10 3.16
4007 5535 4.757149 AGACAAGTTCAGTTATCCAACAGC 59.243 41.667 0.00 0.00 37.10 4.40
4008 5536 3.498397 ACAAGTTCAGTTATCCAACAGCG 59.502 43.478 0.00 0.00 37.10 5.18
4009 5537 2.076863 AGTTCAGTTATCCAACAGCGC 58.923 47.619 0.00 0.00 37.10 5.92
4010 5538 1.804151 GTTCAGTTATCCAACAGCGCA 59.196 47.619 11.47 0.00 37.10 6.09
4011 5539 1.725641 TCAGTTATCCAACAGCGCAG 58.274 50.000 11.47 3.33 37.10 5.18
4012 5540 1.275010 TCAGTTATCCAACAGCGCAGA 59.725 47.619 11.47 0.00 37.10 4.26
4013 5541 1.394917 CAGTTATCCAACAGCGCAGAC 59.605 52.381 11.47 0.00 37.10 3.51
4014 5542 0.370273 GTTATCCAACAGCGCAGACG 59.630 55.000 11.47 0.00 37.17 4.18
4015 5543 0.245266 TTATCCAACAGCGCAGACGA 59.755 50.000 11.47 0.01 43.93 4.20
4016 5544 0.457853 TATCCAACAGCGCAGACGAC 60.458 55.000 11.47 0.00 43.93 4.34
4017 5545 2.434658 ATCCAACAGCGCAGACGACA 62.435 55.000 11.47 0.00 43.93 4.35
4018 5546 2.243957 CCAACAGCGCAGACGACAA 61.244 57.895 11.47 0.00 43.93 3.18
4019 5547 1.202568 CAACAGCGCAGACGACAAG 59.797 57.895 11.47 0.00 43.93 3.16
4020 5548 1.067416 AACAGCGCAGACGACAAGA 59.933 52.632 11.47 0.00 43.93 3.02
4021 5549 0.319900 AACAGCGCAGACGACAAGAT 60.320 50.000 11.47 0.00 43.93 2.40
4022 5550 0.526211 ACAGCGCAGACGACAAGATA 59.474 50.000 11.47 0.00 43.93 1.98
4023 5551 0.917259 CAGCGCAGACGACAAGATAC 59.083 55.000 11.47 0.00 43.93 2.24
4024 5552 0.179134 AGCGCAGACGACAAGATACC 60.179 55.000 11.47 0.00 43.93 2.73
4025 5553 1.472276 GCGCAGACGACAAGATACCG 61.472 60.000 0.30 0.00 43.93 4.02
4026 5554 0.179171 CGCAGACGACAAGATACCGT 60.179 55.000 0.00 0.00 43.93 4.83
4027 5555 1.731424 CGCAGACGACAAGATACCGTT 60.731 52.381 0.00 0.00 43.93 4.44
4028 5556 2.334838 GCAGACGACAAGATACCGTTT 58.665 47.619 0.00 0.00 36.60 3.60
4029 5557 2.344741 GCAGACGACAAGATACCGTTTC 59.655 50.000 0.00 0.00 36.60 2.78
4030 5558 3.571571 CAGACGACAAGATACCGTTTCA 58.428 45.455 0.00 0.00 36.60 2.69
4031 5559 3.608506 CAGACGACAAGATACCGTTTCAG 59.391 47.826 0.00 0.00 36.60 3.02
4032 5560 3.504906 AGACGACAAGATACCGTTTCAGA 59.495 43.478 0.00 0.00 36.60 3.27
4033 5561 3.572584 ACGACAAGATACCGTTTCAGAC 58.427 45.455 0.00 0.00 32.03 3.51
4034 5562 2.921754 CGACAAGATACCGTTTCAGACC 59.078 50.000 0.00 0.00 0.00 3.85
4035 5563 3.613193 CGACAAGATACCGTTTCAGACCA 60.613 47.826 0.00 0.00 0.00 4.02
4036 5564 3.926616 ACAAGATACCGTTTCAGACCAG 58.073 45.455 0.00 0.00 0.00 4.00
4037 5565 3.576982 ACAAGATACCGTTTCAGACCAGA 59.423 43.478 0.00 0.00 0.00 3.86
4038 5566 4.223032 ACAAGATACCGTTTCAGACCAGAT 59.777 41.667 0.00 0.00 0.00 2.90
4039 5567 4.657436 AGATACCGTTTCAGACCAGATC 57.343 45.455 0.00 0.00 0.00 2.75
4040 5568 4.023980 AGATACCGTTTCAGACCAGATCA 58.976 43.478 0.00 0.00 0.00 2.92
4041 5569 4.466370 AGATACCGTTTCAGACCAGATCAA 59.534 41.667 0.00 0.00 0.00 2.57
4042 5570 2.767505 ACCGTTTCAGACCAGATCAAC 58.232 47.619 0.00 0.00 0.00 3.18
4043 5571 1.726791 CCGTTTCAGACCAGATCAACG 59.273 52.381 0.00 0.00 35.23 4.10
4044 5572 1.726791 CGTTTCAGACCAGATCAACGG 59.273 52.381 0.00 0.00 33.06 4.44
4045 5573 1.464997 GTTTCAGACCAGATCAACGGC 59.535 52.381 0.00 0.00 0.00 5.68
4046 5574 0.976641 TTCAGACCAGATCAACGGCT 59.023 50.000 0.00 0.00 0.00 5.52
4047 5575 0.532573 TCAGACCAGATCAACGGCTC 59.467 55.000 0.00 0.00 0.00 4.70
4048 5576 0.803768 CAGACCAGATCAACGGCTCG 60.804 60.000 0.00 0.00 0.00 5.03
4049 5577 1.519455 GACCAGATCAACGGCTCGG 60.519 63.158 0.00 0.00 0.00 4.63
4050 5578 1.945354 GACCAGATCAACGGCTCGGA 61.945 60.000 0.00 0.00 0.00 4.55
4051 5579 1.330655 ACCAGATCAACGGCTCGGAT 61.331 55.000 0.00 0.00 0.00 4.18
4052 5580 0.877649 CCAGATCAACGGCTCGGATG 60.878 60.000 0.00 0.00 0.00 3.51
4053 5581 1.227380 AGATCAACGGCTCGGATGC 60.227 57.895 0.00 0.00 0.00 3.91
4054 5582 2.586079 ATCAACGGCTCGGATGCG 60.586 61.111 0.00 0.00 0.00 4.73
4055 5583 3.371097 ATCAACGGCTCGGATGCGT 62.371 57.895 6.49 0.00 0.00 5.24
4056 5584 3.554692 CAACGGCTCGGATGCGTC 61.555 66.667 6.49 0.00 0.00 5.19
4057 5585 4.814294 AACGGCTCGGATGCGTCC 62.814 66.667 15.54 15.54 41.40 4.79
4059 5587 4.933064 CGGCTCGGATGCGTCCTC 62.933 72.222 22.53 11.12 42.73 3.71
4060 5588 4.933064 GGCTCGGATGCGTCCTCG 62.933 72.222 22.53 13.69 42.73 4.63
4070 5598 3.466879 CGTCCTCGCCGTTTTACC 58.533 61.111 0.00 0.00 0.00 2.85
4071 5599 2.096442 CGTCCTCGCCGTTTTACCC 61.096 63.158 0.00 0.00 0.00 3.69
4072 5600 1.004679 GTCCTCGCCGTTTTACCCA 60.005 57.895 0.00 0.00 0.00 4.51
4073 5601 0.603439 GTCCTCGCCGTTTTACCCAA 60.603 55.000 0.00 0.00 0.00 4.12
4074 5602 0.325602 TCCTCGCCGTTTTACCCAAT 59.674 50.000 0.00 0.00 0.00 3.16
4075 5603 0.450184 CCTCGCCGTTTTACCCAATG 59.550 55.000 0.00 0.00 0.00 2.82
4076 5604 1.444836 CTCGCCGTTTTACCCAATGA 58.555 50.000 0.00 0.00 0.00 2.57
4077 5605 1.396996 CTCGCCGTTTTACCCAATGAG 59.603 52.381 0.00 0.00 0.00 2.90
4078 5606 1.161843 CGCCGTTTTACCCAATGAGT 58.838 50.000 0.00 0.00 0.00 3.41
4079 5607 1.538075 CGCCGTTTTACCCAATGAGTT 59.462 47.619 0.00 0.00 0.00 3.01
4080 5608 2.030628 CGCCGTTTTACCCAATGAGTTT 60.031 45.455 0.00 0.00 0.00 2.66
4081 5609 3.188873 CGCCGTTTTACCCAATGAGTTTA 59.811 43.478 0.00 0.00 0.00 2.01
4082 5610 4.320348 CGCCGTTTTACCCAATGAGTTTAA 60.320 41.667 0.00 0.00 0.00 1.52
4083 5611 5.530712 GCCGTTTTACCCAATGAGTTTAAA 58.469 37.500 0.00 0.00 0.00 1.52
4084 5612 5.403166 GCCGTTTTACCCAATGAGTTTAAAC 59.597 40.000 10.47 10.47 0.00 2.01
4085 5613 5.921976 CCGTTTTACCCAATGAGTTTAAACC 59.078 40.000 14.72 7.22 0.00 3.27
4086 5614 5.626132 CGTTTTACCCAATGAGTTTAAACCG 59.374 40.000 14.72 2.55 0.00 4.44
4087 5615 6.513066 CGTTTTACCCAATGAGTTTAAACCGA 60.513 38.462 14.72 2.12 0.00 4.69
4088 5616 6.956202 TTTACCCAATGAGTTTAAACCGAA 57.044 33.333 14.72 1.41 0.00 4.30
4089 5617 4.841443 ACCCAATGAGTTTAAACCGAAC 57.159 40.909 14.72 5.33 0.00 3.95
4090 5618 4.208746 ACCCAATGAGTTTAAACCGAACA 58.791 39.130 14.72 10.34 0.00 3.18
4091 5619 4.830600 ACCCAATGAGTTTAAACCGAACAT 59.169 37.500 14.72 11.94 0.00 2.71
4092 5620 5.303333 ACCCAATGAGTTTAAACCGAACATT 59.697 36.000 14.72 16.20 0.00 2.71
4093 5621 5.633182 CCCAATGAGTTTAAACCGAACATTG 59.367 40.000 27.74 27.74 41.12 2.82
4094 5622 6.212955 CCAATGAGTTTAAACCGAACATTGT 58.787 36.000 29.49 11.41 40.39 2.71
4095 5623 7.364200 CCAATGAGTTTAAACCGAACATTGTA 58.636 34.615 29.49 9.00 40.39 2.41
4096 5624 7.863375 CCAATGAGTTTAAACCGAACATTGTAA 59.137 33.333 29.49 7.30 40.39 2.41
4097 5625 9.405587 CAATGAGTTTAAACCGAACATTGTAAT 57.594 29.630 27.13 8.07 38.56 1.89
4098 5626 8.964420 ATGAGTTTAAACCGAACATTGTAATG 57.036 30.769 14.72 3.17 42.10 1.90
4115 5643 8.869897 CATTGTAATGTAGTCGTTAATCACTGT 58.130 33.333 0.00 0.00 0.00 3.55
4116 5644 7.806149 TGTAATGTAGTCGTTAATCACTGTG 57.194 36.000 0.17 0.17 0.00 3.66
4117 5645 7.372714 TGTAATGTAGTCGTTAATCACTGTGT 58.627 34.615 7.79 0.00 0.00 3.72
4118 5646 7.868922 TGTAATGTAGTCGTTAATCACTGTGTT 59.131 33.333 7.79 4.51 0.00 3.32
4119 5647 9.345517 GTAATGTAGTCGTTAATCACTGTGTTA 57.654 33.333 7.79 3.58 0.00 2.41
4120 5648 7.807687 ATGTAGTCGTTAATCACTGTGTTAC 57.192 36.000 7.79 1.74 0.00 2.50
4121 5649 6.151691 TGTAGTCGTTAATCACTGTGTTACC 58.848 40.000 7.79 0.00 0.00 2.85
4122 5650 4.232221 AGTCGTTAATCACTGTGTTACCG 58.768 43.478 7.79 9.87 0.00 4.02
4123 5651 2.988493 TCGTTAATCACTGTGTTACCGC 59.012 45.455 7.79 0.00 0.00 5.68
4124 5652 2.222420 CGTTAATCACTGTGTTACCGCG 60.222 50.000 7.79 0.00 0.00 6.46
4125 5653 2.988493 GTTAATCACTGTGTTACCGCGA 59.012 45.455 8.23 0.00 0.00 5.87
4126 5654 2.380084 AATCACTGTGTTACCGCGAT 57.620 45.000 8.23 0.00 0.00 4.58
4127 5655 1.640428 ATCACTGTGTTACCGCGATG 58.360 50.000 8.23 0.00 0.00 3.84
4128 5656 0.599060 TCACTGTGTTACCGCGATGA 59.401 50.000 8.23 0.00 0.00 2.92
4129 5657 0.992072 CACTGTGTTACCGCGATGAG 59.008 55.000 8.23 0.00 0.00 2.90
4130 5658 0.736325 ACTGTGTTACCGCGATGAGC 60.736 55.000 8.23 0.00 43.95 4.26
4131 5659 0.458543 CTGTGTTACCGCGATGAGCT 60.459 55.000 8.23 0.00 45.59 4.09
4132 5660 0.735978 TGTGTTACCGCGATGAGCTG 60.736 55.000 8.23 0.00 45.59 4.24
4133 5661 1.153647 TGTTACCGCGATGAGCTGG 60.154 57.895 8.23 0.00 45.59 4.85
4134 5662 1.141019 GTTACCGCGATGAGCTGGA 59.859 57.895 8.23 0.00 45.59 3.86
4135 5663 0.459585 GTTACCGCGATGAGCTGGAA 60.460 55.000 8.23 0.00 45.59 3.53
4136 5664 0.248012 TTACCGCGATGAGCTGGAAA 59.752 50.000 8.23 0.00 45.59 3.13
4137 5665 0.179111 TACCGCGATGAGCTGGAAAG 60.179 55.000 8.23 0.00 45.59 2.62
4138 5666 2.176273 CCGCGATGAGCTGGAAAGG 61.176 63.158 8.23 0.00 45.59 3.11
4139 5667 2.176273 CGCGATGAGCTGGAAAGGG 61.176 63.158 0.00 0.00 45.59 3.95
4140 5668 1.221840 GCGATGAGCTGGAAAGGGA 59.778 57.895 0.00 0.00 44.04 4.20
4141 5669 0.179034 GCGATGAGCTGGAAAGGGAT 60.179 55.000 0.00 0.00 44.04 3.85
4142 5670 1.748591 GCGATGAGCTGGAAAGGGATT 60.749 52.381 0.00 0.00 44.04 3.01
4143 5671 2.648059 CGATGAGCTGGAAAGGGATTT 58.352 47.619 0.00 0.00 0.00 2.17
4144 5672 3.808728 CGATGAGCTGGAAAGGGATTTA 58.191 45.455 0.00 0.00 0.00 1.40
4145 5673 4.392940 CGATGAGCTGGAAAGGGATTTAT 58.607 43.478 0.00 0.00 0.00 1.40
4146 5674 5.551233 CGATGAGCTGGAAAGGGATTTATA 58.449 41.667 0.00 0.00 0.00 0.98
4147 5675 6.176183 CGATGAGCTGGAAAGGGATTTATAT 58.824 40.000 0.00 0.00 0.00 0.86
4148 5676 6.093219 CGATGAGCTGGAAAGGGATTTATATG 59.907 42.308 0.00 0.00 0.00 1.78
4149 5677 6.266131 TGAGCTGGAAAGGGATTTATATGT 57.734 37.500 0.00 0.00 0.00 2.29
4150 5678 6.672593 TGAGCTGGAAAGGGATTTATATGTT 58.327 36.000 0.00 0.00 0.00 2.71
4151 5679 6.547141 TGAGCTGGAAAGGGATTTATATGTTG 59.453 38.462 0.00 0.00 0.00 3.33
4152 5680 5.835280 AGCTGGAAAGGGATTTATATGTTGG 59.165 40.000 0.00 0.00 0.00 3.77
4153 5681 5.011023 GCTGGAAAGGGATTTATATGTTGGG 59.989 44.000 0.00 0.00 0.00 4.12
4154 5682 4.898861 TGGAAAGGGATTTATATGTTGGGC 59.101 41.667 0.00 0.00 0.00 5.36
4155 5683 4.898861 GGAAAGGGATTTATATGTTGGGCA 59.101 41.667 0.00 0.00 0.00 5.36
4156 5684 5.221441 GGAAAGGGATTTATATGTTGGGCAC 60.221 44.000 0.00 0.00 0.00 5.01
4168 5696 2.413765 GGGCACCGAGACGAGATC 59.586 66.667 0.00 0.00 40.86 2.75
4169 5697 2.024871 GGCACCGAGACGAGATCG 59.975 66.667 0.00 0.00 46.33 3.69
4174 5702 2.329690 CGAGACGAGATCGGGCAG 59.670 66.667 7.22 0.00 44.95 4.85
4175 5703 2.725008 GAGACGAGATCGGGCAGG 59.275 66.667 7.22 0.00 44.95 4.85
4176 5704 2.043852 AGACGAGATCGGGCAGGT 60.044 61.111 7.22 0.00 44.95 4.00
4177 5705 1.668101 GAGACGAGATCGGGCAGGTT 61.668 60.000 7.22 0.00 44.95 3.50
4178 5706 1.519455 GACGAGATCGGGCAGGTTG 60.519 63.158 7.22 0.00 44.95 3.77
4179 5707 2.227089 GACGAGATCGGGCAGGTTGT 62.227 60.000 7.22 0.00 44.95 3.32
4180 5708 0.968901 ACGAGATCGGGCAGGTTGTA 60.969 55.000 7.22 0.00 44.95 2.41
4181 5709 0.174845 CGAGATCGGGCAGGTTGTAA 59.825 55.000 0.00 0.00 35.37 2.41
4182 5710 1.202533 CGAGATCGGGCAGGTTGTAAT 60.203 52.381 0.00 0.00 35.37 1.89
4183 5711 2.741878 CGAGATCGGGCAGGTTGTAATT 60.742 50.000 0.00 0.00 35.37 1.40
4184 5712 2.614057 GAGATCGGGCAGGTTGTAATTG 59.386 50.000 0.00 0.00 0.00 2.32
4185 5713 1.676006 GATCGGGCAGGTTGTAATTGG 59.324 52.381 0.00 0.00 0.00 3.16
4186 5714 0.693622 TCGGGCAGGTTGTAATTGGA 59.306 50.000 0.00 0.00 0.00 3.53
4187 5715 1.283613 TCGGGCAGGTTGTAATTGGAT 59.716 47.619 0.00 0.00 0.00 3.41
4188 5716 2.506231 TCGGGCAGGTTGTAATTGGATA 59.494 45.455 0.00 0.00 0.00 2.59
4189 5717 3.054287 TCGGGCAGGTTGTAATTGGATAA 60.054 43.478 0.00 0.00 0.00 1.75
4190 5718 3.315191 CGGGCAGGTTGTAATTGGATAAG 59.685 47.826 0.00 0.00 0.00 1.73
4191 5719 4.278310 GGGCAGGTTGTAATTGGATAAGT 58.722 43.478 0.00 0.00 0.00 2.24
4192 5720 4.338400 GGGCAGGTTGTAATTGGATAAGTC 59.662 45.833 0.00 0.00 0.00 3.01
4193 5721 4.947388 GGCAGGTTGTAATTGGATAAGTCA 59.053 41.667 0.00 0.00 0.00 3.41
4194 5722 5.594317 GGCAGGTTGTAATTGGATAAGTCAT 59.406 40.000 0.00 0.00 0.00 3.06
4195 5723 6.096846 GGCAGGTTGTAATTGGATAAGTCATT 59.903 38.462 0.00 0.00 0.00 2.57
4196 5724 6.974622 GCAGGTTGTAATTGGATAAGTCATTG 59.025 38.462 0.00 0.00 0.00 2.82
4197 5725 7.362920 GCAGGTTGTAATTGGATAAGTCATTGT 60.363 37.037 0.00 0.00 0.00 2.71
4198 5726 9.173021 CAGGTTGTAATTGGATAAGTCATTGTA 57.827 33.333 0.00 0.00 0.00 2.41
4199 5727 9.396022 AGGTTGTAATTGGATAAGTCATTGTAG 57.604 33.333 0.00 0.00 0.00 2.74
4200 5728 8.621286 GGTTGTAATTGGATAAGTCATTGTAGG 58.379 37.037 0.00 0.00 0.00 3.18
4201 5729 9.174166 GTTGTAATTGGATAAGTCATTGTAGGT 57.826 33.333 0.00 0.00 0.00 3.08
4204 5732 8.989980 GTAATTGGATAAGTCATTGTAGGTAGC 58.010 37.037 0.00 0.00 0.00 3.58
4205 5733 6.808321 TTGGATAAGTCATTGTAGGTAGCT 57.192 37.500 0.00 0.00 0.00 3.32
4206 5734 7.907841 TTGGATAAGTCATTGTAGGTAGCTA 57.092 36.000 0.00 0.00 0.00 3.32
4207 5735 7.526142 TGGATAAGTCATTGTAGGTAGCTAG 57.474 40.000 0.86 0.00 0.00 3.42
4208 5736 7.295340 TGGATAAGTCATTGTAGGTAGCTAGA 58.705 38.462 0.86 0.00 0.00 2.43
4209 5737 7.783119 TGGATAAGTCATTGTAGGTAGCTAGAA 59.217 37.037 13.23 13.23 0.00 2.10
4210 5738 8.083462 GGATAAGTCATTGTAGGTAGCTAGAAC 58.917 40.741 13.14 2.96 0.00 3.01
4211 5739 5.855740 AGTCATTGTAGGTAGCTAGAACC 57.144 43.478 13.14 6.59 37.27 3.62
4212 5740 4.650131 AGTCATTGTAGGTAGCTAGAACCC 59.350 45.833 13.14 5.24 37.77 4.11
4213 5741 4.650131 GTCATTGTAGGTAGCTAGAACCCT 59.350 45.833 13.14 5.97 37.77 4.34
4214 5742 5.832060 GTCATTGTAGGTAGCTAGAACCCTA 59.168 44.000 13.14 4.17 37.77 3.53
4215 5743 6.016108 GTCATTGTAGGTAGCTAGAACCCTAG 60.016 46.154 13.14 3.18 44.08 3.02
4216 5744 4.450305 TGTAGGTAGCTAGAACCCTAGG 57.550 50.000 0.06 0.06 42.05 3.02
4222 5750 1.760192 GCTAGAACCCTAGGTCGTGA 58.240 55.000 8.29 0.00 42.05 4.35
4223 5751 1.677052 GCTAGAACCCTAGGTCGTGAG 59.323 57.143 8.29 0.52 42.05 3.51
4224 5752 1.677052 CTAGAACCCTAGGTCGTGAGC 59.323 57.143 8.29 0.00 38.93 4.26
4225 5753 0.251653 AGAACCCTAGGTCGTGAGCA 60.252 55.000 8.29 0.00 33.12 4.26
4226 5754 0.606604 GAACCCTAGGTCGTGAGCAA 59.393 55.000 8.29 0.00 33.12 3.91
4227 5755 0.608640 AACCCTAGGTCGTGAGCAAG 59.391 55.000 8.29 0.00 33.12 4.01
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 20 6.559810 TGTGGTGTTTGTGTATTTTCTTCAG 58.440 36.000 0.00 0.00 0.00 3.02
39 41 1.881324 TGCACTTGTGATGTGATGTGG 59.119 47.619 4.79 0.00 37.60 4.17
85 87 1.286553 ACCGAGGGGCAAATAAATCCA 59.713 47.619 0.00 0.00 36.48 3.41
96 98 3.905249 GTGAAATCACCGAGGGGC 58.095 61.111 2.04 0.00 40.85 5.80
113 115 2.686816 GCGTCCCCAACATGTTCGG 61.687 63.158 14.75 14.75 0.00 4.30
146 148 1.202313 GGACCAGTAGACATCACTCGC 60.202 57.143 0.00 0.00 0.00 5.03
201 204 2.813754 TGATAGTTGCTGCTCCAACAAC 59.186 45.455 17.93 10.02 45.73 3.32
211 214 2.093306 TTCCACGGTGATAGTTGCTG 57.907 50.000 10.28 0.00 0.00 4.41
220 223 2.029964 GGCGACTTTCCACGGTGA 59.970 61.111 10.28 0.00 0.00 4.02
222 225 3.450043 AACGGCGACTTTCCACGGT 62.450 57.895 16.62 0.00 0.00 4.83
276 302 6.387041 AGAGGTTGTCGTATGATTAATCGA 57.613 37.500 10.80 2.12 0.00 3.59
281 307 8.664798 CATCAAAAAGAGGTTGTCGTATGATTA 58.335 33.333 0.00 0.00 0.00 1.75
286 312 5.411669 GGTCATCAAAAAGAGGTTGTCGTAT 59.588 40.000 0.00 0.00 0.00 3.06
287 313 4.753107 GGTCATCAAAAAGAGGTTGTCGTA 59.247 41.667 0.00 0.00 0.00 3.43
288 314 3.564225 GGTCATCAAAAAGAGGTTGTCGT 59.436 43.478 0.00 0.00 0.00 4.34
294 320 5.532779 GTGAAGAAGGTCATCAAAAAGAGGT 59.467 40.000 0.00 0.00 0.00 3.85
301 327 2.778299 CGGGTGAAGAAGGTCATCAAA 58.222 47.619 0.00 0.00 29.55 2.69
302 328 1.610624 GCGGGTGAAGAAGGTCATCAA 60.611 52.381 0.00 0.00 29.55 2.57
303 329 0.036388 GCGGGTGAAGAAGGTCATCA 60.036 55.000 0.00 0.00 29.55 3.07
306 332 1.070786 GTGCGGGTGAAGAAGGTCA 59.929 57.895 0.00 0.00 0.00 4.02
372 399 0.530650 CTGCCATGAATAGCCGACGT 60.531 55.000 0.00 0.00 0.00 4.34
457 484 4.529219 CCGCCGCAGCCATAGTCA 62.529 66.667 0.00 0.00 34.57 3.41
503 1806 3.204827 GGCATCATCAACGCGCCT 61.205 61.111 5.73 0.00 39.73 5.52
546 1849 1.538047 TCGCCTTCTACTACAACCGT 58.462 50.000 0.00 0.00 0.00 4.83
633 1936 3.005684 TGCCCAAAAGATTGCTACAACTG 59.994 43.478 0.00 0.00 35.10 3.16
706 2009 0.948623 GGTCGCCAACAAAAATGCCC 60.949 55.000 0.00 0.00 0.00 5.36
707 2010 1.281566 CGGTCGCCAACAAAAATGCC 61.282 55.000 0.00 0.00 0.00 4.40
815 2134 2.731587 ATCAACACGCGCTGTTTGCC 62.732 55.000 19.61 0.00 41.50 4.52
937 2264 3.495806 GGAATCTGGATCTACTGGCTTGG 60.496 52.174 0.00 0.00 0.00 3.61
938 2265 3.390639 AGGAATCTGGATCTACTGGCTTG 59.609 47.826 0.00 0.00 0.00 4.01
939 2266 3.390639 CAGGAATCTGGATCTACTGGCTT 59.609 47.826 0.00 0.00 37.36 4.35
940 2267 2.971330 CAGGAATCTGGATCTACTGGCT 59.029 50.000 0.00 0.00 37.36 4.75
941 2268 2.703007 ACAGGAATCTGGATCTACTGGC 59.297 50.000 0.00 0.00 44.99 4.85
942 2269 4.222336 AGACAGGAATCTGGATCTACTGG 58.778 47.826 0.00 0.00 44.99 4.00
1101 2428 0.032952 AGTTGAACAGCGCCGACTAA 59.967 50.000 2.29 0.00 0.00 2.24
1319 2647 5.125578 TGCTGATCTTGACAGTACGACTATT 59.874 40.000 0.00 0.00 37.64 1.73
1336 2664 2.223203 CGTGCAATTCTTCCTGCTGATC 60.223 50.000 0.00 0.00 39.38 2.92
1344 2672 2.109425 AGGTACCGTGCAATTCTTCC 57.891 50.000 6.18 0.00 0.00 3.46
1394 2722 8.351461 GGATACTACTTAGTGATCTAAACGCTT 58.649 37.037 0.00 0.00 37.10 4.68
1493 2821 9.001542 CATCCAAAAGCTTTTATGGATCAAAAA 57.998 29.630 30.19 12.71 33.28 1.94
1530 2858 2.751259 TGCAATCAGCTCTGAACCATTC 59.249 45.455 3.47 0.00 43.58 2.67
1531 2859 2.799017 TGCAATCAGCTCTGAACCATT 58.201 42.857 3.47 0.00 43.58 3.16
1532 2860 2.490903 GTTGCAATCAGCTCTGAACCAT 59.509 45.455 0.59 0.00 43.58 3.55
1582 2910 5.507985 GGGAGTTTCACAGTTCTTCCAAATG 60.508 44.000 0.00 0.00 0.00 2.32
1611 2939 3.128349 TGTTGCTCCTTGTCGAGTTTAC 58.872 45.455 0.00 0.00 32.11 2.01
1621 2979 0.527565 CGGGGAATTGTTGCTCCTTG 59.472 55.000 0.00 0.00 31.88 3.61
1632 2990 7.486407 TCTACTACTACTTTTTCGGGGAATT 57.514 36.000 0.00 0.00 0.00 2.17
1651 3009 9.771534 GCATATCTTGTTCCTTATCTTTCTACT 57.228 33.333 0.00 0.00 0.00 2.57
1652 3010 9.547753 TGCATATCTTGTTCCTTATCTTTCTAC 57.452 33.333 0.00 0.00 0.00 2.59
1680 3038 1.421268 ACCACACAGATCAAAGAGGCA 59.579 47.619 0.00 0.00 0.00 4.75
1743 3102 6.183360 TGCTTAGAGAAGACACAGCACTATAG 60.183 42.308 0.00 0.00 34.25 1.31
1746 3105 3.826729 TGCTTAGAGAAGACACAGCACTA 59.173 43.478 0.00 0.00 34.25 2.74
1814 3173 6.630203 ACCACTGTATTTCCTATGGTGTAA 57.370 37.500 0.00 0.00 38.99 2.41
1881 3240 5.450818 TTCTAAGGGTTCCATTGCACTAT 57.549 39.130 0.00 0.00 0.00 2.12
2012 3374 1.375908 TTGGCCGCAGAGACATCAC 60.376 57.895 0.00 0.00 0.00 3.06
2017 3379 1.739067 AAATAGTTGGCCGCAGAGAC 58.261 50.000 0.00 0.00 0.00 3.36
2025 3387 8.817100 GCTAATTGAATACAAAAATAGTTGGCC 58.183 33.333 0.00 0.00 39.54 5.36
2085 3571 2.407562 AGGTTTGCCTGAATTTGGGTT 58.592 42.857 1.47 0.00 45.05 4.11
2142 3629 1.202651 AGAAACCACGGAACCTGTCAG 60.203 52.381 0.00 0.00 0.00 3.51
2199 3686 3.498927 AAAGAATTTGAGCTGGATGCG 57.501 42.857 0.00 0.00 41.78 4.73
2313 3800 7.230510 ACAATACAGTTTGGCAGATGAAACTAA 59.769 33.333 1.48 0.00 39.79 2.24
2513 4001 5.755409 TTAGAGATTGCACCCTGTTCTAA 57.245 39.130 0.00 0.00 0.00 2.10
2521 4009 5.643379 TGACAAAATTAGAGATTGCACCC 57.357 39.130 0.00 0.00 0.00 4.61
2535 4023 8.090214 CCACACCAATAAGAAAGATGACAAAAT 58.910 33.333 0.00 0.00 0.00 1.82
2656 4144 6.240894 ACAAATCAAGTCCAGCTATTTCTCA 58.759 36.000 0.00 0.00 0.00 3.27
2658 4146 8.680903 CATAACAAATCAAGTCCAGCTATTTCT 58.319 33.333 0.00 0.00 0.00 2.52
2669 4157 8.968242 GTCTGTTTTTCCATAACAAATCAAGTC 58.032 33.333 0.00 0.00 35.28 3.01
2808 4296 0.909133 TCCACATGACAGCTAGGGCA 60.909 55.000 0.00 0.00 41.70 5.36
2810 4298 2.787473 TTTCCACATGACAGCTAGGG 57.213 50.000 0.00 0.00 0.00 3.53
3128 4629 6.285990 AGCAGCACAAGAAAGATTGAATTTT 58.714 32.000 0.00 0.00 34.20 1.82
3257 4758 7.873505 CCTATATTTAACTCTGGCAACCTAGAC 59.126 40.741 0.00 0.00 0.00 2.59
3332 4833 2.287009 GCCACAACAGTAACTGAAGCAC 60.287 50.000 0.00 0.00 35.18 4.40
3392 4893 0.950555 TGCAACGACCTGAGTGCATC 60.951 55.000 0.00 0.00 0.00 3.91
3407 4908 3.999001 CTCTGTCTTATCAGCAAGTGCAA 59.001 43.478 6.00 0.00 45.16 4.08
3417 4918 7.888250 ACACAGTATCATCTCTGTCTTATCA 57.112 36.000 0.00 0.00 42.05 2.15
3467 4968 4.970662 AATCCTCCATCATTTCGTTGTG 57.029 40.909 0.00 0.00 0.00 3.33
3513 5014 1.094785 AATCGGTTTTGCAGGATCCG 58.905 50.000 5.98 12.79 42.12 4.18
3630 5131 9.895138 CTGGGAAATTTTATTTCATTCCATTCT 57.105 29.630 12.63 0.00 41.03 2.40
3665 5166 1.269102 ACTCCGAACTGAACTGTGTCG 60.269 52.381 0.00 0.00 0.00 4.35
3725 5226 1.776034 GAAGATCGCATTCCGCACCC 61.776 60.000 0.00 0.00 42.60 4.61
3729 5230 2.032054 TCAATTGAAGATCGCATTCCGC 59.968 45.455 5.45 0.00 36.73 5.54
3766 5294 2.432563 CCGGGCCGGGCATATAAA 59.567 61.111 37.27 0.00 44.15 1.40
3815 5343 2.893682 ATTAGCCAAGCTGTCCGCCC 62.894 60.000 0.00 0.00 40.10 6.13
3816 5344 1.440145 GATTAGCCAAGCTGTCCGCC 61.440 60.000 0.00 0.00 40.10 6.13
3817 5345 1.766143 CGATTAGCCAAGCTGTCCGC 61.766 60.000 0.00 0.00 40.10 5.54
3818 5346 0.460284 ACGATTAGCCAAGCTGTCCG 60.460 55.000 0.00 2.53 40.10 4.79
3819 5347 1.009829 CACGATTAGCCAAGCTGTCC 58.990 55.000 0.00 0.00 40.10 4.02
3820 5348 2.010145 TCACGATTAGCCAAGCTGTC 57.990 50.000 0.00 0.00 40.10 3.51
3821 5349 2.472695 TTCACGATTAGCCAAGCTGT 57.527 45.000 0.00 0.00 40.10 4.40
3822 5350 3.829886 TTTTCACGATTAGCCAAGCTG 57.170 42.857 0.00 0.00 40.10 4.24
3823 5351 5.822519 TCATATTTTCACGATTAGCCAAGCT 59.177 36.000 0.00 0.00 43.41 3.74
3824 5352 5.909610 GTCATATTTTCACGATTAGCCAAGC 59.090 40.000 0.00 0.00 0.00 4.01
3825 5353 6.430451 GGTCATATTTTCACGATTAGCCAAG 58.570 40.000 0.00 0.00 0.00 3.61
3826 5354 5.298276 GGGTCATATTTTCACGATTAGCCAA 59.702 40.000 0.00 0.00 0.00 4.52
3827 5355 4.819630 GGGTCATATTTTCACGATTAGCCA 59.180 41.667 0.00 0.00 0.00 4.75
3828 5356 4.819630 TGGGTCATATTTTCACGATTAGCC 59.180 41.667 0.00 0.00 0.00 3.93
3829 5357 6.199393 GTTGGGTCATATTTTCACGATTAGC 58.801 40.000 0.00 0.00 0.00 3.09
3830 5358 6.542370 AGGTTGGGTCATATTTTCACGATTAG 59.458 38.462 0.00 0.00 0.00 1.73
3831 5359 6.419791 AGGTTGGGTCATATTTTCACGATTA 58.580 36.000 0.00 0.00 0.00 1.75
3832 5360 5.261216 AGGTTGGGTCATATTTTCACGATT 58.739 37.500 0.00 0.00 0.00 3.34
3833 5361 4.855340 AGGTTGGGTCATATTTTCACGAT 58.145 39.130 0.00 0.00 0.00 3.73
3834 5362 4.258543 GAGGTTGGGTCATATTTTCACGA 58.741 43.478 0.00 0.00 0.00 4.35
3835 5363 3.063452 CGAGGTTGGGTCATATTTTCACG 59.937 47.826 0.00 0.00 0.00 4.35
3836 5364 4.258543 TCGAGGTTGGGTCATATTTTCAC 58.741 43.478 0.00 0.00 0.00 3.18
3837 5365 4.561500 TCGAGGTTGGGTCATATTTTCA 57.438 40.909 0.00 0.00 0.00 2.69
3838 5366 4.095932 GGTTCGAGGTTGGGTCATATTTTC 59.904 45.833 0.00 0.00 0.00 2.29
3839 5367 4.014406 GGTTCGAGGTTGGGTCATATTTT 58.986 43.478 0.00 0.00 0.00 1.82
3840 5368 3.617284 GGTTCGAGGTTGGGTCATATTT 58.383 45.455 0.00 0.00 0.00 1.40
3841 5369 2.092592 GGGTTCGAGGTTGGGTCATATT 60.093 50.000 0.00 0.00 0.00 1.28
3842 5370 1.489230 GGGTTCGAGGTTGGGTCATAT 59.511 52.381 0.00 0.00 0.00 1.78
3843 5371 0.906775 GGGTTCGAGGTTGGGTCATA 59.093 55.000 0.00 0.00 0.00 2.15
3844 5372 1.131303 TGGGTTCGAGGTTGGGTCAT 61.131 55.000 0.00 0.00 0.00 3.06
3845 5373 1.764571 CTGGGTTCGAGGTTGGGTCA 61.765 60.000 0.00 0.00 0.00 4.02
3846 5374 1.003718 CTGGGTTCGAGGTTGGGTC 60.004 63.158 0.00 0.00 0.00 4.46
3847 5375 1.057851 TTCTGGGTTCGAGGTTGGGT 61.058 55.000 0.00 0.00 0.00 4.51
3848 5376 0.605589 GTTCTGGGTTCGAGGTTGGG 60.606 60.000 0.00 0.00 0.00 4.12
3849 5377 0.107831 TGTTCTGGGTTCGAGGTTGG 59.892 55.000 0.00 0.00 0.00 3.77
3850 5378 2.185004 ATGTTCTGGGTTCGAGGTTG 57.815 50.000 0.00 0.00 0.00 3.77
3851 5379 4.569719 AATATGTTCTGGGTTCGAGGTT 57.430 40.909 0.00 0.00 0.00 3.50
3852 5380 4.261801 CAAATATGTTCTGGGTTCGAGGT 58.738 43.478 0.00 0.00 0.00 3.85
3853 5381 3.627577 CCAAATATGTTCTGGGTTCGAGG 59.372 47.826 0.00 0.00 0.00 4.63
3854 5382 3.627577 CCCAAATATGTTCTGGGTTCGAG 59.372 47.826 11.69 0.00 44.24 4.04
3855 5383 3.616219 CCCAAATATGTTCTGGGTTCGA 58.384 45.455 11.69 0.00 44.24 3.71
3861 5389 2.738743 ACCTGCCCAAATATGTTCTGG 58.261 47.619 0.00 0.00 0.00 3.86
3862 5390 4.019174 AGAACCTGCCCAAATATGTTCTG 58.981 43.478 0.00 0.00 40.47 3.02
3863 5391 4.322057 AGAACCTGCCCAAATATGTTCT 57.678 40.909 0.00 0.00 38.02 3.01
3864 5392 4.462483 TGAAGAACCTGCCCAAATATGTTC 59.538 41.667 0.00 0.00 33.94 3.18
3865 5393 4.415596 TGAAGAACCTGCCCAAATATGTT 58.584 39.130 0.00 0.00 0.00 2.71
3866 5394 4.046286 TGAAGAACCTGCCCAAATATGT 57.954 40.909 0.00 0.00 0.00 2.29
3867 5395 5.361857 AGATTGAAGAACCTGCCCAAATATG 59.638 40.000 0.00 0.00 0.00 1.78
3868 5396 5.361857 CAGATTGAAGAACCTGCCCAAATAT 59.638 40.000 0.00 0.00 0.00 1.28
3869 5397 4.706476 CAGATTGAAGAACCTGCCCAAATA 59.294 41.667 0.00 0.00 0.00 1.40
3870 5398 3.512724 CAGATTGAAGAACCTGCCCAAAT 59.487 43.478 0.00 0.00 0.00 2.32
3871 5399 2.892852 CAGATTGAAGAACCTGCCCAAA 59.107 45.455 0.00 0.00 0.00 3.28
3872 5400 2.517959 CAGATTGAAGAACCTGCCCAA 58.482 47.619 0.00 0.00 0.00 4.12
3873 5401 1.887956 GCAGATTGAAGAACCTGCCCA 60.888 52.381 0.00 0.00 44.39 5.36
3874 5402 0.813821 GCAGATTGAAGAACCTGCCC 59.186 55.000 0.00 0.00 44.39 5.36
3875 5403 0.449388 CGCAGATTGAAGAACCTGCC 59.551 55.000 0.00 0.00 46.61 4.85
3876 5404 1.135859 CACGCAGATTGAAGAACCTGC 60.136 52.381 0.00 0.00 46.05 4.85
3877 5405 2.414481 CTCACGCAGATTGAAGAACCTG 59.586 50.000 0.00 0.00 0.00 4.00
3878 5406 2.693069 CTCACGCAGATTGAAGAACCT 58.307 47.619 0.00 0.00 0.00 3.50
3879 5407 1.129437 GCTCACGCAGATTGAAGAACC 59.871 52.381 0.00 0.00 35.78 3.62
3880 5408 1.800586 TGCTCACGCAGATTGAAGAAC 59.199 47.619 0.00 0.00 42.25 3.01
3881 5409 2.168326 TGCTCACGCAGATTGAAGAA 57.832 45.000 0.00 0.00 42.25 2.52
3882 5410 3.912899 TGCTCACGCAGATTGAAGA 57.087 47.368 0.00 0.00 42.25 2.87
3918 5446 3.467226 TTCGATCCCTGGTCGCCC 61.467 66.667 2.10 0.00 38.88 6.13
3919 5447 2.202892 GTTCGATCCCTGGTCGCC 60.203 66.667 2.10 0.00 38.88 5.54
3920 5448 2.202892 GGTTCGATCCCTGGTCGC 60.203 66.667 0.63 0.00 38.88 5.19
3921 5449 1.141881 CAGGTTCGATCCCTGGTCG 59.858 63.158 19.19 0.60 44.77 4.79
3926 5454 0.041238 TCCTGACAGGTTCGATCCCT 59.959 55.000 21.06 3.61 36.53 4.20
3927 5455 0.175989 GTCCTGACAGGTTCGATCCC 59.824 60.000 21.06 1.08 36.53 3.85
3928 5456 0.175989 GGTCCTGACAGGTTCGATCC 59.824 60.000 21.06 4.21 36.53 3.36
3929 5457 1.134965 CAGGTCCTGACAGGTTCGATC 60.135 57.143 21.06 2.11 36.53 3.69
3930 5458 0.898320 CAGGTCCTGACAGGTTCGAT 59.102 55.000 21.06 5.86 36.53 3.59
3931 5459 0.178973 TCAGGTCCTGACAGGTTCGA 60.179 55.000 18.15 10.76 35.39 3.71
3932 5460 0.679505 TTCAGGTCCTGACAGGTTCG 59.320 55.000 21.73 8.69 40.46 3.95
3933 5461 1.270893 GGTTCAGGTCCTGACAGGTTC 60.271 57.143 21.73 14.57 40.46 3.62
3934 5462 0.765510 GGTTCAGGTCCTGACAGGTT 59.234 55.000 21.73 5.80 40.46 3.50
3935 5463 0.104934 AGGTTCAGGTCCTGACAGGT 60.105 55.000 21.73 3.84 40.46 4.00
3936 5464 0.610687 GAGGTTCAGGTCCTGACAGG 59.389 60.000 21.73 15.99 40.46 4.00
3937 5465 0.244994 CGAGGTTCAGGTCCTGACAG 59.755 60.000 21.73 7.37 40.46 3.51
3938 5466 1.816863 GCGAGGTTCAGGTCCTGACA 61.817 60.000 21.73 10.03 40.46 3.58
3939 5467 1.079750 GCGAGGTTCAGGTCCTGAC 60.080 63.158 21.73 15.43 40.46 3.51
3940 5468 1.228894 AGCGAGGTTCAGGTCCTGA 60.229 57.895 18.15 18.15 38.87 3.86
3941 5469 1.079543 CAGCGAGGTTCAGGTCCTG 60.080 63.158 13.21 13.21 35.20 3.86
3942 5470 1.122019 AACAGCGAGGTTCAGGTCCT 61.122 55.000 0.00 0.00 38.09 3.85
3943 5471 0.606604 TAACAGCGAGGTTCAGGTCC 59.393 55.000 0.00 0.00 32.29 4.46
3944 5472 1.272769 AGTAACAGCGAGGTTCAGGTC 59.727 52.381 0.00 0.00 32.29 3.85
3945 5473 1.000955 CAGTAACAGCGAGGTTCAGGT 59.999 52.381 0.00 0.00 32.29 4.00
3946 5474 1.272490 TCAGTAACAGCGAGGTTCAGG 59.728 52.381 0.00 0.00 32.29 3.86
3947 5475 2.724977 TCAGTAACAGCGAGGTTCAG 57.275 50.000 0.00 0.00 32.29 3.02
3948 5476 2.626266 TCTTCAGTAACAGCGAGGTTCA 59.374 45.455 0.00 0.00 32.29 3.18
3949 5477 3.299340 TCTTCAGTAACAGCGAGGTTC 57.701 47.619 0.00 0.00 32.29 3.62
3950 5478 3.746045 TTCTTCAGTAACAGCGAGGTT 57.254 42.857 0.00 0.00 34.81 3.50
3951 5479 3.321111 TCTTTCTTCAGTAACAGCGAGGT 59.679 43.478 0.00 0.00 0.00 3.85
3952 5480 3.914312 TCTTTCTTCAGTAACAGCGAGG 58.086 45.455 0.00 0.00 0.00 4.63
3953 5481 5.117897 GTCTTCTTTCTTCAGTAACAGCGAG 59.882 44.000 0.00 0.00 0.00 5.03
3954 5482 4.982916 GTCTTCTTTCTTCAGTAACAGCGA 59.017 41.667 0.00 0.00 0.00 4.93
3955 5483 4.143514 CGTCTTCTTTCTTCAGTAACAGCG 60.144 45.833 0.00 0.00 0.00 5.18
3956 5484 4.982916 TCGTCTTCTTTCTTCAGTAACAGC 59.017 41.667 0.00 0.00 0.00 4.40
3957 5485 5.115773 CGTCGTCTTCTTTCTTCAGTAACAG 59.884 44.000 0.00 0.00 0.00 3.16
3958 5486 4.974275 CGTCGTCTTCTTTCTTCAGTAACA 59.026 41.667 0.00 0.00 0.00 2.41
3959 5487 4.143577 GCGTCGTCTTCTTTCTTCAGTAAC 60.144 45.833 0.00 0.00 0.00 2.50
3960 5488 3.979495 GCGTCGTCTTCTTTCTTCAGTAA 59.021 43.478 0.00 0.00 0.00 2.24
3961 5489 3.004002 TGCGTCGTCTTCTTTCTTCAGTA 59.996 43.478 0.00 0.00 0.00 2.74
3962 5490 2.223735 TGCGTCGTCTTCTTTCTTCAGT 60.224 45.455 0.00 0.00 0.00 3.41
3963 5491 2.394708 TGCGTCGTCTTCTTTCTTCAG 58.605 47.619 0.00 0.00 0.00 3.02
3964 5492 2.502213 TGCGTCGTCTTCTTTCTTCA 57.498 45.000 0.00 0.00 0.00 3.02
3965 5493 3.050619 TCTTGCGTCGTCTTCTTTCTTC 58.949 45.455 0.00 0.00 0.00 2.87
3966 5494 2.795470 GTCTTGCGTCGTCTTCTTTCTT 59.205 45.455 0.00 0.00 0.00 2.52
3967 5495 2.223735 TGTCTTGCGTCGTCTTCTTTCT 60.224 45.455 0.00 0.00 0.00 2.52
3968 5496 2.124903 TGTCTTGCGTCGTCTTCTTTC 58.875 47.619 0.00 0.00 0.00 2.62
3969 5497 2.218953 TGTCTTGCGTCGTCTTCTTT 57.781 45.000 0.00 0.00 0.00 2.52
3970 5498 2.128035 CTTGTCTTGCGTCGTCTTCTT 58.872 47.619 0.00 0.00 0.00 2.52
3971 5499 1.067212 ACTTGTCTTGCGTCGTCTTCT 59.933 47.619 0.00 0.00 0.00 2.85
3972 5500 1.488527 ACTTGTCTTGCGTCGTCTTC 58.511 50.000 0.00 0.00 0.00 2.87
3973 5501 1.859080 GAACTTGTCTTGCGTCGTCTT 59.141 47.619 0.00 0.00 0.00 3.01
3974 5502 1.202371 TGAACTTGTCTTGCGTCGTCT 60.202 47.619 0.00 0.00 0.00 4.18
3975 5503 1.190323 CTGAACTTGTCTTGCGTCGTC 59.810 52.381 0.00 0.00 0.00 4.20
3976 5504 1.209128 CTGAACTTGTCTTGCGTCGT 58.791 50.000 0.00 0.00 0.00 4.34
3977 5505 1.209128 ACTGAACTTGTCTTGCGTCG 58.791 50.000 0.00 0.00 0.00 5.12
3978 5506 4.143094 GGATAACTGAACTTGTCTTGCGTC 60.143 45.833 0.00 0.00 0.00 5.19
3979 5507 3.746492 GGATAACTGAACTTGTCTTGCGT 59.254 43.478 0.00 0.00 0.00 5.24
3980 5508 3.745975 TGGATAACTGAACTTGTCTTGCG 59.254 43.478 0.00 0.00 0.00 4.85
3981 5509 5.008613 TGTTGGATAACTGAACTTGTCTTGC 59.991 40.000 0.00 0.00 37.68 4.01
3982 5510 6.618287 TGTTGGATAACTGAACTTGTCTTG 57.382 37.500 0.00 0.00 37.68 3.02
3983 5511 5.239525 GCTGTTGGATAACTGAACTTGTCTT 59.760 40.000 0.00 0.00 37.79 3.01
3984 5512 4.757149 GCTGTTGGATAACTGAACTTGTCT 59.243 41.667 0.00 0.00 37.79 3.41
3985 5513 4.377431 CGCTGTTGGATAACTGAACTTGTC 60.377 45.833 0.00 0.00 37.79 3.18
3986 5514 3.498397 CGCTGTTGGATAACTGAACTTGT 59.502 43.478 0.00 0.00 37.79 3.16
3987 5515 3.667960 GCGCTGTTGGATAACTGAACTTG 60.668 47.826 0.00 0.00 37.79 3.16
3988 5516 2.484264 GCGCTGTTGGATAACTGAACTT 59.516 45.455 0.00 0.00 37.79 2.66
3989 5517 2.076863 GCGCTGTTGGATAACTGAACT 58.923 47.619 0.00 0.00 37.79 3.01
3990 5518 1.804151 TGCGCTGTTGGATAACTGAAC 59.196 47.619 9.73 0.00 37.79 3.18
3991 5519 2.076100 CTGCGCTGTTGGATAACTGAA 58.924 47.619 9.73 0.00 37.79 3.02
3992 5520 1.275010 TCTGCGCTGTTGGATAACTGA 59.725 47.619 9.73 0.00 37.79 3.41
3993 5521 1.394917 GTCTGCGCTGTTGGATAACTG 59.605 52.381 9.73 0.00 37.68 3.16
3994 5522 1.726853 GTCTGCGCTGTTGGATAACT 58.273 50.000 9.73 0.00 37.68 2.24
3995 5523 0.370273 CGTCTGCGCTGTTGGATAAC 59.630 55.000 9.73 0.00 37.32 1.89
3996 5524 0.245266 TCGTCTGCGCTGTTGGATAA 59.755 50.000 9.73 0.00 38.14 1.75
3997 5525 0.457853 GTCGTCTGCGCTGTTGGATA 60.458 55.000 9.73 0.00 38.14 2.59
3998 5526 1.738099 GTCGTCTGCGCTGTTGGAT 60.738 57.895 9.73 0.00 38.14 3.41
3999 5527 2.355837 GTCGTCTGCGCTGTTGGA 60.356 61.111 9.73 4.82 38.14 3.53
4000 5528 2.162921 CTTGTCGTCTGCGCTGTTGG 62.163 60.000 9.73 2.32 38.14 3.77
4001 5529 1.202568 CTTGTCGTCTGCGCTGTTG 59.797 57.895 9.73 5.56 38.14 3.33
4002 5530 0.319900 ATCTTGTCGTCTGCGCTGTT 60.320 50.000 9.73 0.00 38.14 3.16
4003 5531 0.526211 TATCTTGTCGTCTGCGCTGT 59.474 50.000 9.73 0.00 38.14 4.40
4004 5532 0.917259 GTATCTTGTCGTCTGCGCTG 59.083 55.000 9.73 8.88 38.14 5.18
4005 5533 0.179134 GGTATCTTGTCGTCTGCGCT 60.179 55.000 9.73 0.00 38.14 5.92
4006 5534 1.472276 CGGTATCTTGTCGTCTGCGC 61.472 60.000 0.00 0.00 38.14 6.09
4007 5535 0.179171 ACGGTATCTTGTCGTCTGCG 60.179 55.000 0.00 0.00 39.92 5.18
4008 5536 1.992170 AACGGTATCTTGTCGTCTGC 58.008 50.000 0.00 0.00 36.01 4.26
4009 5537 3.571571 TGAAACGGTATCTTGTCGTCTG 58.428 45.455 0.00 0.00 36.01 3.51
4010 5538 3.504906 TCTGAAACGGTATCTTGTCGTCT 59.495 43.478 0.00 0.00 36.01 4.18
4011 5539 3.607209 GTCTGAAACGGTATCTTGTCGTC 59.393 47.826 0.00 0.00 36.01 4.20
4012 5540 3.572584 GTCTGAAACGGTATCTTGTCGT 58.427 45.455 0.00 0.00 38.89 4.34
4013 5541 2.921754 GGTCTGAAACGGTATCTTGTCG 59.078 50.000 0.00 0.00 0.00 4.35
4014 5542 3.921677 TGGTCTGAAACGGTATCTTGTC 58.078 45.455 0.00 0.00 0.00 3.18
4015 5543 3.576982 TCTGGTCTGAAACGGTATCTTGT 59.423 43.478 0.00 0.00 0.00 3.16
4016 5544 4.188247 TCTGGTCTGAAACGGTATCTTG 57.812 45.455 0.00 0.00 0.00 3.02
4017 5545 4.466370 TGATCTGGTCTGAAACGGTATCTT 59.534 41.667 0.00 0.00 0.00 2.40
4018 5546 4.023980 TGATCTGGTCTGAAACGGTATCT 58.976 43.478 0.00 0.00 0.00 1.98
4019 5547 4.386867 TGATCTGGTCTGAAACGGTATC 57.613 45.455 0.00 0.00 0.00 2.24
4020 5548 4.504858 GTTGATCTGGTCTGAAACGGTAT 58.495 43.478 0.00 0.00 0.00 2.73
4021 5549 3.613193 CGTTGATCTGGTCTGAAACGGTA 60.613 47.826 4.61 0.00 37.37 4.02
4022 5550 2.767505 GTTGATCTGGTCTGAAACGGT 58.232 47.619 0.00 0.00 0.00 4.83
4023 5551 1.726791 CGTTGATCTGGTCTGAAACGG 59.273 52.381 4.61 0.00 37.37 4.44
4024 5552 1.726791 CCGTTGATCTGGTCTGAAACG 59.273 52.381 5.36 5.36 39.90 3.60
4025 5553 1.464997 GCCGTTGATCTGGTCTGAAAC 59.535 52.381 0.00 0.00 0.00 2.78
4026 5554 1.347707 AGCCGTTGATCTGGTCTGAAA 59.652 47.619 0.00 0.00 0.00 2.69
4027 5555 0.976641 AGCCGTTGATCTGGTCTGAA 59.023 50.000 0.00 0.00 0.00 3.02
4028 5556 0.532573 GAGCCGTTGATCTGGTCTGA 59.467 55.000 0.00 0.00 0.00 3.27
4029 5557 0.803768 CGAGCCGTTGATCTGGTCTG 60.804 60.000 0.00 0.00 0.00 3.51
4030 5558 1.513158 CGAGCCGTTGATCTGGTCT 59.487 57.895 0.00 0.00 0.00 3.85
4031 5559 1.519455 CCGAGCCGTTGATCTGGTC 60.519 63.158 0.00 0.00 0.00 4.02
4032 5560 1.330655 ATCCGAGCCGTTGATCTGGT 61.331 55.000 0.00 0.00 0.00 4.00
4033 5561 0.877649 CATCCGAGCCGTTGATCTGG 60.878 60.000 0.00 0.00 0.00 3.86
4034 5562 1.493950 GCATCCGAGCCGTTGATCTG 61.494 60.000 0.00 0.00 0.00 2.90
4035 5563 1.227380 GCATCCGAGCCGTTGATCT 60.227 57.895 0.00 0.00 0.00 2.75
4036 5564 2.589492 CGCATCCGAGCCGTTGATC 61.589 63.158 0.00 0.00 36.29 2.92
4037 5565 2.586079 CGCATCCGAGCCGTTGAT 60.586 61.111 0.00 0.00 36.29 2.57
4038 5566 3.982372 GACGCATCCGAGCCGTTGA 62.982 63.158 0.00 0.00 38.29 3.18
4039 5567 3.554692 GACGCATCCGAGCCGTTG 61.555 66.667 0.00 0.00 38.29 4.10
4040 5568 4.814294 GGACGCATCCGAGCCGTT 62.814 66.667 0.00 0.00 34.48 4.44
4053 5581 2.096442 GGGTAAAACGGCGAGGACG 61.096 63.158 16.62 0.00 41.40 4.79
4054 5582 0.603439 TTGGGTAAAACGGCGAGGAC 60.603 55.000 16.62 5.64 0.00 3.85
4055 5583 0.325602 ATTGGGTAAAACGGCGAGGA 59.674 50.000 16.62 0.00 0.00 3.71
4056 5584 0.450184 CATTGGGTAAAACGGCGAGG 59.550 55.000 16.62 0.00 0.00 4.63
4057 5585 1.396996 CTCATTGGGTAAAACGGCGAG 59.603 52.381 16.62 0.00 0.00 5.03
4058 5586 1.270947 ACTCATTGGGTAAAACGGCGA 60.271 47.619 16.62 0.00 0.00 5.54
4059 5587 1.161843 ACTCATTGGGTAAAACGGCG 58.838 50.000 4.80 4.80 0.00 6.46
4060 5588 3.653539 AAACTCATTGGGTAAAACGGC 57.346 42.857 0.00 0.00 0.00 5.68
4061 5589 5.921976 GGTTTAAACTCATTGGGTAAAACGG 59.078 40.000 17.50 0.00 0.00 4.44
4062 5590 5.626132 CGGTTTAAACTCATTGGGTAAAACG 59.374 40.000 17.50 12.28 38.17 3.60
4063 5591 6.737118 TCGGTTTAAACTCATTGGGTAAAAC 58.263 36.000 17.50 14.69 0.00 2.43
4064 5592 6.956202 TCGGTTTAAACTCATTGGGTAAAA 57.044 33.333 17.50 0.00 0.00 1.52
4065 5593 6.320672 TGTTCGGTTTAAACTCATTGGGTAAA 59.679 34.615 17.50 0.00 0.00 2.01
4066 5594 5.826737 TGTTCGGTTTAAACTCATTGGGTAA 59.173 36.000 17.50 0.00 0.00 2.85
4067 5595 5.374921 TGTTCGGTTTAAACTCATTGGGTA 58.625 37.500 17.50 0.00 0.00 3.69
4068 5596 4.208746 TGTTCGGTTTAAACTCATTGGGT 58.791 39.130 17.50 0.00 0.00 4.51
4069 5597 4.839668 TGTTCGGTTTAAACTCATTGGG 57.160 40.909 17.50 0.47 0.00 4.12
4070 5598 6.212955 ACAATGTTCGGTTTAAACTCATTGG 58.787 36.000 31.16 23.19 42.38 3.16
4071 5599 8.789881 TTACAATGTTCGGTTTAAACTCATTG 57.210 30.769 29.31 29.31 43.15 2.82
4072 5600 9.405587 CATTACAATGTTCGGTTTAAACTCATT 57.594 29.630 17.50 17.19 0.00 2.57
4073 5601 8.573035 ACATTACAATGTTCGGTTTAAACTCAT 58.427 29.630 17.50 13.27 46.95 2.90
4074 5602 7.932335 ACATTACAATGTTCGGTTTAAACTCA 58.068 30.769 17.50 11.83 46.95 3.41
4075 5603 9.537848 CTACATTACAATGTTCGGTTTAAACTC 57.462 33.333 17.50 7.40 46.95 3.01
4076 5604 9.059260 ACTACATTACAATGTTCGGTTTAAACT 57.941 29.630 17.50 0.00 46.95 2.66
4077 5605 9.321590 GACTACATTACAATGTTCGGTTTAAAC 57.678 33.333 12.50 9.98 46.95 2.01
4078 5606 8.222433 CGACTACATTACAATGTTCGGTTTAAA 58.778 33.333 12.50 0.00 46.95 1.52
4079 5607 7.384660 ACGACTACATTACAATGTTCGGTTTAA 59.615 33.333 22.96 3.24 46.95 1.52
4080 5608 6.867816 ACGACTACATTACAATGTTCGGTTTA 59.132 34.615 22.96 3.79 46.95 2.01
4081 5609 5.697633 ACGACTACATTACAATGTTCGGTTT 59.302 36.000 22.96 8.50 46.95 3.27
4082 5610 5.232463 ACGACTACATTACAATGTTCGGTT 58.768 37.500 22.96 8.99 46.95 4.44
4083 5611 4.813027 ACGACTACATTACAATGTTCGGT 58.187 39.130 22.96 15.47 46.95 4.69
4084 5612 5.773239 AACGACTACATTACAATGTTCGG 57.227 39.130 22.96 13.35 46.95 4.30
4085 5613 8.588789 TGATTAACGACTACATTACAATGTTCG 58.411 33.333 19.85 19.85 46.95 3.95
4086 5614 9.685005 GTGATTAACGACTACATTACAATGTTC 57.315 33.333 12.50 5.09 46.95 3.18
4087 5615 9.431887 AGTGATTAACGACTACATTACAATGTT 57.568 29.630 12.50 0.00 46.95 2.71
4089 5617 8.869897 ACAGTGATTAACGACTACATTACAATG 58.130 33.333 0.00 0.37 42.10 2.82
4090 5618 8.869897 CACAGTGATTAACGACTACATTACAAT 58.130 33.333 0.00 0.00 0.00 2.71
4091 5619 7.868922 ACACAGTGATTAACGACTACATTACAA 59.131 33.333 7.81 0.00 0.00 2.41
4092 5620 7.372714 ACACAGTGATTAACGACTACATTACA 58.627 34.615 7.81 0.00 0.00 2.41
4093 5621 7.807687 ACACAGTGATTAACGACTACATTAC 57.192 36.000 7.81 0.00 0.00 1.89
4094 5622 9.345517 GTAACACAGTGATTAACGACTACATTA 57.654 33.333 7.81 0.00 0.00 1.90
4095 5623 7.330208 GGTAACACAGTGATTAACGACTACATT 59.670 37.037 7.81 0.00 0.00 2.71
4096 5624 6.810182 GGTAACACAGTGATTAACGACTACAT 59.190 38.462 7.81 0.00 0.00 2.29
4097 5625 6.151691 GGTAACACAGTGATTAACGACTACA 58.848 40.000 7.81 0.00 0.00 2.74
4098 5626 5.284660 CGGTAACACAGTGATTAACGACTAC 59.715 44.000 19.99 0.00 42.73 2.73
4099 5627 5.393124 CGGTAACACAGTGATTAACGACTA 58.607 41.667 19.99 0.00 42.73 2.59
4100 5628 4.232221 CGGTAACACAGTGATTAACGACT 58.768 43.478 19.99 0.00 42.73 4.18
4101 5629 3.181537 GCGGTAACACAGTGATTAACGAC 60.182 47.826 25.01 16.90 42.73 4.34
4102 5630 2.988493 GCGGTAACACAGTGATTAACGA 59.012 45.455 25.01 0.00 42.73 3.85
4103 5631 2.222420 CGCGGTAACACAGTGATTAACG 60.222 50.000 20.19 20.19 42.92 3.18
4104 5632 2.988493 TCGCGGTAACACAGTGATTAAC 59.012 45.455 7.81 4.41 28.36 2.01
4105 5633 3.300852 TCGCGGTAACACAGTGATTAA 57.699 42.857 7.81 0.00 28.36 1.40
4106 5634 3.119424 TCATCGCGGTAACACAGTGATTA 60.119 43.478 7.81 0.00 39.78 1.75
4107 5635 1.999735 CATCGCGGTAACACAGTGATT 59.000 47.619 7.81 0.60 39.78 2.57
4108 5636 1.203758 TCATCGCGGTAACACAGTGAT 59.796 47.619 7.81 0.00 42.61 3.06
4109 5637 0.599060 TCATCGCGGTAACACAGTGA 59.401 50.000 7.81 0.00 37.24 3.41
4110 5638 0.992072 CTCATCGCGGTAACACAGTG 59.008 55.000 6.13 0.00 0.00 3.66
4111 5639 0.736325 GCTCATCGCGGTAACACAGT 60.736 55.000 6.13 0.00 0.00 3.55
4112 5640 0.458543 AGCTCATCGCGGTAACACAG 60.459 55.000 6.13 0.00 45.59 3.66
4113 5641 0.735978 CAGCTCATCGCGGTAACACA 60.736 55.000 6.13 0.00 45.59 3.72
4114 5642 1.421410 CCAGCTCATCGCGGTAACAC 61.421 60.000 6.13 0.00 45.59 3.32
4115 5643 1.153647 CCAGCTCATCGCGGTAACA 60.154 57.895 6.13 0.00 45.59 2.41
4116 5644 0.459585 TTCCAGCTCATCGCGGTAAC 60.460 55.000 6.13 0.00 45.59 2.50
4117 5645 0.248012 TTTCCAGCTCATCGCGGTAA 59.752 50.000 6.13 0.00 45.59 2.85
4118 5646 0.179111 CTTTCCAGCTCATCGCGGTA 60.179 55.000 6.13 0.00 45.59 4.02
4119 5647 1.448540 CTTTCCAGCTCATCGCGGT 60.449 57.895 6.13 0.00 45.59 5.68
4120 5648 2.176273 CCTTTCCAGCTCATCGCGG 61.176 63.158 6.13 0.00 45.59 6.46
4121 5649 2.176273 CCCTTTCCAGCTCATCGCG 61.176 63.158 0.00 0.00 45.59 5.87
4122 5650 0.179034 ATCCCTTTCCAGCTCATCGC 60.179 55.000 0.00 0.00 39.57 4.58
4123 5651 2.338577 AATCCCTTTCCAGCTCATCG 57.661 50.000 0.00 0.00 0.00 3.84
4124 5652 6.944862 ACATATAAATCCCTTTCCAGCTCATC 59.055 38.462 0.00 0.00 0.00 2.92
4125 5653 6.856757 ACATATAAATCCCTTTCCAGCTCAT 58.143 36.000 0.00 0.00 0.00 2.90
4126 5654 6.266131 ACATATAAATCCCTTTCCAGCTCA 57.734 37.500 0.00 0.00 0.00 4.26
4127 5655 6.015940 CCAACATATAAATCCCTTTCCAGCTC 60.016 42.308 0.00 0.00 0.00 4.09
4128 5656 5.835280 CCAACATATAAATCCCTTTCCAGCT 59.165 40.000 0.00 0.00 0.00 4.24
4129 5657 5.011023 CCCAACATATAAATCCCTTTCCAGC 59.989 44.000 0.00 0.00 0.00 4.85
4130 5658 5.011023 GCCCAACATATAAATCCCTTTCCAG 59.989 44.000 0.00 0.00 0.00 3.86
4131 5659 4.898861 GCCCAACATATAAATCCCTTTCCA 59.101 41.667 0.00 0.00 0.00 3.53
4132 5660 4.898861 TGCCCAACATATAAATCCCTTTCC 59.101 41.667 0.00 0.00 0.00 3.13
4133 5661 5.221441 GGTGCCCAACATATAAATCCCTTTC 60.221 44.000 0.00 0.00 0.00 2.62
4134 5662 4.653801 GGTGCCCAACATATAAATCCCTTT 59.346 41.667 0.00 0.00 0.00 3.11
4135 5663 4.223144 GGTGCCCAACATATAAATCCCTT 58.777 43.478 0.00 0.00 0.00 3.95
4136 5664 3.750599 CGGTGCCCAACATATAAATCCCT 60.751 47.826 0.00 0.00 0.00 4.20
4137 5665 2.556622 CGGTGCCCAACATATAAATCCC 59.443 50.000 0.00 0.00 0.00 3.85
4138 5666 3.482436 TCGGTGCCCAACATATAAATCC 58.518 45.455 0.00 0.00 0.00 3.01
4139 5667 4.213482 GTCTCGGTGCCCAACATATAAATC 59.787 45.833 0.00 0.00 0.00 2.17
4140 5668 4.134563 GTCTCGGTGCCCAACATATAAAT 58.865 43.478 0.00 0.00 0.00 1.40
4141 5669 3.537580 GTCTCGGTGCCCAACATATAAA 58.462 45.455 0.00 0.00 0.00 1.40
4142 5670 2.482316 CGTCTCGGTGCCCAACATATAA 60.482 50.000 0.00 0.00 0.00 0.98
4143 5671 1.067974 CGTCTCGGTGCCCAACATATA 59.932 52.381 0.00 0.00 0.00 0.86
4144 5672 0.179084 CGTCTCGGTGCCCAACATAT 60.179 55.000 0.00 0.00 0.00 1.78
4145 5673 1.216977 CGTCTCGGTGCCCAACATA 59.783 57.895 0.00 0.00 0.00 2.29
4146 5674 2.047274 CGTCTCGGTGCCCAACAT 60.047 61.111 0.00 0.00 0.00 2.71
4147 5675 3.220999 CTCGTCTCGGTGCCCAACA 62.221 63.158 0.00 0.00 0.00 3.33
4148 5676 2.227089 ATCTCGTCTCGGTGCCCAAC 62.227 60.000 0.00 0.00 0.00 3.77
4149 5677 1.945354 GATCTCGTCTCGGTGCCCAA 61.945 60.000 0.00 0.00 0.00 4.12
4150 5678 2.362503 ATCTCGTCTCGGTGCCCA 60.363 61.111 0.00 0.00 0.00 5.36
4151 5679 2.413765 GATCTCGTCTCGGTGCCC 59.586 66.667 0.00 0.00 0.00 5.36
4152 5680 2.024871 CGATCTCGTCTCGGTGCC 59.975 66.667 0.00 0.00 32.58 5.01
4157 5685 2.329690 CTGCCCGATCTCGTCTCG 59.670 66.667 0.00 0.00 37.74 4.04
4158 5686 1.668101 AACCTGCCCGATCTCGTCTC 61.668 60.000 0.00 0.00 37.74 3.36
4159 5687 1.682684 AACCTGCCCGATCTCGTCT 60.683 57.895 0.00 0.00 37.74 4.18
4160 5688 1.519455 CAACCTGCCCGATCTCGTC 60.519 63.158 0.00 0.00 37.74 4.20
4161 5689 0.968901 TACAACCTGCCCGATCTCGT 60.969 55.000 0.00 0.00 37.74 4.18
4162 5690 0.174845 TTACAACCTGCCCGATCTCG 59.825 55.000 0.00 0.00 39.44 4.04
4163 5691 2.614057 CAATTACAACCTGCCCGATCTC 59.386 50.000 0.00 0.00 0.00 2.75
4164 5692 2.643551 CAATTACAACCTGCCCGATCT 58.356 47.619 0.00 0.00 0.00 2.75
4165 5693 1.676006 CCAATTACAACCTGCCCGATC 59.324 52.381 0.00 0.00 0.00 3.69
4166 5694 1.283613 TCCAATTACAACCTGCCCGAT 59.716 47.619 0.00 0.00 0.00 4.18
4167 5695 0.693622 TCCAATTACAACCTGCCCGA 59.306 50.000 0.00 0.00 0.00 5.14
4168 5696 1.762708 ATCCAATTACAACCTGCCCG 58.237 50.000 0.00 0.00 0.00 6.13
4169 5697 4.278310 ACTTATCCAATTACAACCTGCCC 58.722 43.478 0.00 0.00 0.00 5.36
4170 5698 4.947388 TGACTTATCCAATTACAACCTGCC 59.053 41.667 0.00 0.00 0.00 4.85
4171 5699 6.699575 ATGACTTATCCAATTACAACCTGC 57.300 37.500 0.00 0.00 0.00 4.85
4172 5700 8.055279 ACAATGACTTATCCAATTACAACCTG 57.945 34.615 0.00 0.00 0.00 4.00
4173 5701 9.396022 CTACAATGACTTATCCAATTACAACCT 57.604 33.333 0.00 0.00 0.00 3.50
4174 5702 8.621286 CCTACAATGACTTATCCAATTACAACC 58.379 37.037 0.00 0.00 0.00 3.77
4175 5703 9.174166 ACCTACAATGACTTATCCAATTACAAC 57.826 33.333 0.00 0.00 0.00 3.32
4178 5706 8.989980 GCTACCTACAATGACTTATCCAATTAC 58.010 37.037 0.00 0.00 0.00 1.89
4179 5707 8.934697 AGCTACCTACAATGACTTATCCAATTA 58.065 33.333 0.00 0.00 0.00 1.40
4180 5708 7.806180 AGCTACCTACAATGACTTATCCAATT 58.194 34.615 0.00 0.00 0.00 2.32
4181 5709 7.380423 AGCTACCTACAATGACTTATCCAAT 57.620 36.000 0.00 0.00 0.00 3.16
4182 5710 6.808321 AGCTACCTACAATGACTTATCCAA 57.192 37.500 0.00 0.00 0.00 3.53
4183 5711 7.295340 TCTAGCTACCTACAATGACTTATCCA 58.705 38.462 0.00 0.00 0.00 3.41
4184 5712 7.762588 TCTAGCTACCTACAATGACTTATCC 57.237 40.000 0.00 0.00 0.00 2.59
4185 5713 8.083462 GGTTCTAGCTACCTACAATGACTTATC 58.917 40.741 6.61 0.00 32.75 1.75
4186 5714 7.015389 GGGTTCTAGCTACCTACAATGACTTAT 59.985 40.741 12.01 0.00 35.92 1.73
4187 5715 6.323225 GGGTTCTAGCTACCTACAATGACTTA 59.677 42.308 12.01 0.00 35.92 2.24
4188 5716 5.128991 GGGTTCTAGCTACCTACAATGACTT 59.871 44.000 12.01 0.00 35.92 3.01
4189 5717 4.650131 GGGTTCTAGCTACCTACAATGACT 59.350 45.833 12.01 0.00 35.92 3.41
4190 5718 4.650131 AGGGTTCTAGCTACCTACAATGAC 59.350 45.833 12.01 0.00 35.92 3.06
4191 5719 4.880164 AGGGTTCTAGCTACCTACAATGA 58.120 43.478 12.01 0.00 35.92 2.57
4192 5720 5.244178 CCTAGGGTTCTAGCTACCTACAATG 59.756 48.000 0.00 0.00 41.18 2.82
4193 5721 5.103172 ACCTAGGGTTCTAGCTACCTACAAT 60.103 44.000 14.81 0.00 41.18 2.71
4194 5722 4.231426 ACCTAGGGTTCTAGCTACCTACAA 59.769 45.833 14.81 0.00 41.18 2.41
4195 5723 3.790408 ACCTAGGGTTCTAGCTACCTACA 59.210 47.826 14.81 0.00 41.18 2.74
4196 5724 4.397420 GACCTAGGGTTCTAGCTACCTAC 58.603 52.174 14.81 0.00 41.18 3.18
4197 5725 3.072184 CGACCTAGGGTTCTAGCTACCTA 59.928 52.174 14.81 5.99 41.18 3.08
4198 5726 2.158638 CGACCTAGGGTTCTAGCTACCT 60.159 54.545 14.81 5.12 41.18 3.08
4199 5727 2.228925 CGACCTAGGGTTCTAGCTACC 58.771 57.143 14.81 5.54 41.18 3.18
4200 5728 2.617774 CACGACCTAGGGTTCTAGCTAC 59.382 54.545 14.81 0.00 41.18 3.58
4201 5729 2.507058 TCACGACCTAGGGTTCTAGCTA 59.493 50.000 14.81 0.00 41.18 3.32
4202 5730 1.284198 TCACGACCTAGGGTTCTAGCT 59.716 52.381 14.81 0.00 41.18 3.32
4203 5731 1.677052 CTCACGACCTAGGGTTCTAGC 59.323 57.143 14.81 0.00 41.18 3.42
4204 5732 1.677052 GCTCACGACCTAGGGTTCTAG 59.323 57.143 14.81 6.06 41.95 2.43
4205 5733 1.005097 TGCTCACGACCTAGGGTTCTA 59.995 52.381 14.81 0.00 35.25 2.10
4206 5734 0.251653 TGCTCACGACCTAGGGTTCT 60.252 55.000 14.81 0.00 35.25 3.01
4207 5735 0.606604 TTGCTCACGACCTAGGGTTC 59.393 55.000 14.81 1.01 35.25 3.62
4208 5736 0.608640 CTTGCTCACGACCTAGGGTT 59.391 55.000 14.81 0.00 35.25 4.11
4209 5737 2.277858 CTTGCTCACGACCTAGGGT 58.722 57.895 14.81 0.00 39.44 4.34


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.