Multiple sequence alignment - TraesCS2B01G279400

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G279400 chr2B 100.000 6566 0 0 1 6566 385569255 385562690 0.000000e+00 12126.0
1 TraesCS2B01G279400 chr2B 85.473 296 39 4 301 595 248103788 248103496 8.270000e-79 305.0
2 TraesCS2B01G279400 chr2B 93.878 147 9 0 157 303 546205742 546205596 8.570000e-54 222.0
3 TraesCS2B01G279400 chr2B 92.715 151 9 2 156 305 331238590 331238739 3.990000e-52 217.0
4 TraesCS2B01G279400 chr2B 91.398 93 6 2 291 383 652415489 652415579 6.910000e-25 126.0
5 TraesCS2B01G279400 chr2B 80.916 131 15 4 2310 2430 500592810 500592940 1.950000e-15 95.3
6 TraesCS2B01G279400 chr2A 95.194 3600 118 21 3001 6566 414991632 414995210 0.000000e+00 5638.0
7 TraesCS2B01G279400 chr2A 96.130 1111 31 3 544 1653 414989253 414990352 0.000000e+00 1803.0
8 TraesCS2B01G279400 chr2A 96.367 578 17 2 2428 3002 414990897 414991473 0.000000e+00 948.0
9 TraesCS2B01G279400 chr2A 96.203 553 17 3 1764 2314 414990348 414990898 0.000000e+00 902.0
10 TraesCS2B01G279400 chr2A 93.865 163 5 1 1 158 414988944 414989106 2.370000e-59 241.0
11 TraesCS2B01G279400 chr2A 91.034 145 11 2 2308 2451 26851547 26851690 1.870000e-45 195.0
12 TraesCS2B01G279400 chr2A 93.976 83 5 0 301 383 670457867 670457785 6.910000e-25 126.0
13 TraesCS2B01G279400 chr2D 96.820 1541 31 4 3657 5179 317945734 317944194 0.000000e+00 2558.0
14 TraesCS2B01G279400 chr2D 94.421 1398 57 9 5177 6566 317944094 317942710 0.000000e+00 2130.0
15 TraesCS2B01G279400 chr2D 95.216 1066 48 1 591 1653 317948176 317947111 0.000000e+00 1683.0
16 TraesCS2B01G279400 chr2D 96.627 830 27 1 2428 3256 317946564 317945735 0.000000e+00 1376.0
17 TraesCS2B01G279400 chr2D 96.926 553 15 2 1764 2314 317947115 317946563 0.000000e+00 926.0
18 TraesCS2B01G279400 chr2D 92.208 154 11 1 152 305 239722136 239722288 3.990000e-52 217.0
19 TraesCS2B01G279400 chr2D 96.154 130 4 1 2313 2442 158283408 158283280 1.850000e-50 211.0
20 TraesCS2B01G279400 chr2D 95.385 130 5 1 2313 2441 381869740 381869611 8.630000e-49 206.0
21 TraesCS2B01G279400 chr2D 95.833 120 5 0 1648 1767 158283411 158283292 1.870000e-45 195.0
22 TraesCS2B01G279400 chr6D 88.021 768 83 7 878 1643 56909019 56909779 0.000000e+00 900.0
23 TraesCS2B01G279400 chr6D 84.783 552 72 7 3740 4286 56911578 56912122 1.610000e-150 544.0
24 TraesCS2B01G279400 chr6D 84.914 232 27 5 5194 5424 56913451 56913675 1.840000e-55 228.0
25 TraesCS2B01G279400 chr6D 92.949 156 9 2 151 305 65394268 65394422 6.620000e-55 226.0
26 TraesCS2B01G279400 chr6D 95.349 129 6 0 2302 2430 319246382 319246254 8.630000e-49 206.0
27 TraesCS2B01G279400 chr6D 91.367 139 9 3 1651 1787 87087851 87087988 3.130000e-43 187.0
28 TraesCS2B01G279400 chr6D 91.379 58 4 1 5689 5745 60240664 60240721 1.960000e-10 78.7
29 TraesCS2B01G279400 chr6D 92.727 55 3 1 5686 5740 419440829 419440882 1.960000e-10 78.7
30 TraesCS2B01G279400 chr6B 87.760 768 84 8 878 1643 127604381 127605140 0.000000e+00 889.0
31 TraesCS2B01G279400 chr6B 86.239 545 58 13 3740 4272 127606883 127607422 5.710000e-160 575.0
32 TraesCS2B01G279400 chr6B 77.455 723 101 34 2481 3165 127605976 127606674 6.220000e-100 375.0
33 TraesCS2B01G279400 chr6B 91.949 236 17 2 4294 4528 127607602 127607836 4.910000e-86 329.0
34 TraesCS2B01G279400 chr6B 85.034 294 42 2 303 595 716638117 716638409 1.380000e-76 298.0
35 TraesCS2B01G279400 chr6B 81.288 326 41 14 5256 5561 127608985 127609310 5.090000e-61 246.0
36 TraesCS2B01G279400 chr6B 90.798 163 13 2 143 305 49768945 49768785 3.990000e-52 217.0
37 TraesCS2B01G279400 chr6B 93.431 137 7 2 2312 2447 36133874 36133739 1.120000e-47 202.0
38 TraesCS2B01G279400 chr6A 87.630 768 83 8 878 1643 71536939 71537696 0.000000e+00 881.0
39 TraesCS2B01G279400 chr6A 86.604 530 60 8 3740 4266 71539277 71539798 5.710000e-160 575.0
40 TraesCS2B01G279400 chr6A 82.927 410 60 6 2460 2867 71538345 71538746 1.740000e-95 361.0
41 TraesCS2B01G279400 chr6A 90.751 173 13 2 5256 5427 71541228 71541398 1.840000e-55 228.0
42 TraesCS2B01G279400 chr6A 92.208 154 10 2 153 305 113538133 113537981 3.990000e-52 217.0
43 TraesCS2B01G279400 chr6A 94.215 121 6 1 1645 1765 565470672 565470553 4.040000e-42 183.0
44 TraesCS2B01G279400 chr6A 75.819 397 61 24 4734 5110 71540601 71540982 1.130000e-37 169.0
45 TraesCS2B01G279400 chr7D 90.119 253 23 2 320 570 552951452 552951704 1.770000e-85 327.0
46 TraesCS2B01G279400 chr5A 86.986 292 32 6 308 595 8807662 8807951 2.280000e-84 324.0
47 TraesCS2B01G279400 chr7B 90.129 233 20 2 367 596 138214426 138214658 3.850000e-77 300.0
48 TraesCS2B01G279400 chr7B 97.581 124 3 0 2306 2429 748124176 748124299 5.160000e-51 213.0
49 TraesCS2B01G279400 chr7B 96.667 120 4 0 1648 1767 252178053 252178172 4.020000e-47 200.0
50 TraesCS2B01G279400 chr7B 92.086 139 7 3 1634 1772 567542250 567542384 6.720000e-45 193.0
51 TraesCS2B01G279400 chr7B 98.077 52 1 0 5689 5740 613980025 613980076 2.520000e-14 91.6
52 TraesCS2B01G279400 chr7B 96.364 55 2 0 5686 5740 688926976 688926922 2.520000e-14 91.6
53 TraesCS2B01G279400 chr7B 96.296 54 2 0 5687 5740 728507274 728507221 9.070000e-14 89.8
54 TraesCS2B01G279400 chr7A 86.617 269 31 5 331 596 144131164 144130898 6.440000e-75 292.0
55 TraesCS2B01G279400 chr1B 84.746 295 42 3 303 595 546861805 546861512 6.440000e-75 292.0
56 TraesCS2B01G279400 chr1B 97.436 117 3 0 2313 2429 448532836 448532952 4.020000e-47 200.0
57 TraesCS2B01G279400 chr5B 86.250 240 32 1 356 595 651350635 651350873 6.530000e-65 259.0
58 TraesCS2B01G279400 chr5B 83.154 279 45 2 308 585 90201294 90201017 3.040000e-63 254.0
59 TraesCS2B01G279400 chr5B 97.458 118 3 0 1651 1768 407639560 407639443 1.120000e-47 202.0
60 TraesCS2B01G279400 chr5B 92.969 128 9 0 1640 1767 447149088 447149215 3.130000e-43 187.0
61 TraesCS2B01G279400 chr5B 76.757 185 27 11 2313 2483 125229943 125229761 9.070000e-14 89.8
62 TraesCS2B01G279400 chr1A 93.333 150 10 0 156 305 530513385 530513534 8.570000e-54 222.0
63 TraesCS2B01G279400 chr1A 98.182 55 1 0 5685 5739 120017863 120017809 5.420000e-16 97.1
64 TraesCS2B01G279400 chr1A 96.364 55 2 0 5686 5740 377940074 377940020 2.520000e-14 91.6
65 TraesCS2B01G279400 chr1A 94.643 56 3 0 5685 5740 516825563 516825618 3.260000e-13 87.9
66 TraesCS2B01G279400 chr4D 92.667 150 10 1 156 305 62285432 62285580 1.430000e-51 215.0
67 TraesCS2B01G279400 chr4D 92.667 150 10 1 156 305 294699492 294699640 1.430000e-51 215.0
68 TraesCS2B01G279400 chr4D 94.643 56 3 0 5686 5741 363960572 363960517 3.260000e-13 87.9
69 TraesCS2B01G279400 chr3B 98.305 118 2 0 1650 1767 786786514 786786631 2.400000e-49 207.0
70 TraesCS2B01G279400 chr3B 98.113 53 1 0 5687 5739 61984846 61984794 7.010000e-15 93.5
71 TraesCS2B01G279400 chr3B 94.737 57 3 0 5685 5741 1596413 1596357 9.070000e-14 89.8
72 TraesCS2B01G279400 chr4B 94.737 133 6 1 1636 1768 520425843 520425974 8.630000e-49 206.0
73 TraesCS2B01G279400 chr4B 96.032 126 4 1 1650 1774 467274991 467274866 3.100000e-48 204.0
74 TraesCS2B01G279400 chr4B 90.909 143 9 4 1649 1788 5684247 5684106 8.690000e-44 189.0
75 TraesCS2B01G279400 chr4B 91.228 57 4 1 5685 5740 417572520 417572576 7.060000e-10 76.8
76 TraesCS2B01G279400 chrUn 96.748 123 3 1 2307 2429 87827388 87827509 3.100000e-48 204.0
77 TraesCS2B01G279400 chrUn 96.748 123 3 1 2307 2429 309972433 309972554 3.100000e-48 204.0
78 TraesCS2B01G279400 chrUn 92.248 129 9 1 1638 1766 144753702 144753829 1.450000e-41 182.0
79 TraesCS2B01G279400 chrUn 92.248 129 9 1 1638 1766 144790767 144790894 1.450000e-41 182.0
80 TraesCS2B01G279400 chrUn 92.248 129 9 1 1638 1766 144942352 144942479 1.450000e-41 182.0
81 TraesCS2B01G279400 chrUn 98.077 52 1 0 5689 5740 321532968 321532917 2.520000e-14 91.6
82 TraesCS2B01G279400 chr5D 98.148 54 1 0 5687 5740 22835690 22835637 1.950000e-15 95.3
83 TraesCS2B01G279400 chr1D 96.296 54 2 0 5688 5741 491604738 491604791 9.070000e-14 89.8
84 TraesCS2B01G279400 chr3D 91.803 61 5 0 5679 5739 105096289 105096349 1.170000e-12 86.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G279400 chr2B 385562690 385569255 6565 True 12126.000000 12126 100.0000 1 6566 1 chr2B.!!$R2 6565
1 TraesCS2B01G279400 chr2A 414988944 414995210 6266 False 1906.400000 5638 95.5518 1 6566 5 chr2A.!!$F2 6565
2 TraesCS2B01G279400 chr2D 317942710 317948176 5466 True 1734.600000 2558 96.0020 591 6566 5 chr2D.!!$R3 5975
3 TraesCS2B01G279400 chr6D 56909019 56913675 4656 False 557.333333 900 85.9060 878 5424 3 chr6D.!!$F5 4546
4 TraesCS2B01G279400 chr6B 127604381 127609310 4929 False 482.800000 889 84.9382 878 5561 5 chr6B.!!$F2 4683
5 TraesCS2B01G279400 chr6A 71536939 71541398 4459 False 442.800000 881 84.7462 878 5427 5 chr6A.!!$F1 4549

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
107 113 1.202580 CCTTCCCTAGCAATGGACTCG 60.203 57.143 0.00 0.00 0.00 4.18 F
1145 1205 0.111061 AGTGAGCCCAAATCAGTGCA 59.889 50.000 0.00 0.00 0.00 4.57 F
1674 1734 0.030369 CCTCCGTCCGGAAATACTCG 59.970 60.000 5.23 3.90 44.66 4.18 F
2330 2532 0.032813 ATACTCCCTCCGTCCGGAAA 60.033 55.000 5.23 0.00 44.66 3.13 F
2334 2536 0.032813 TCCCTCCGTCCGGAAATACT 60.033 55.000 5.23 0.00 44.66 2.12 F
2425 2627 0.032813 AGTATTTCCGGACGGAGGGA 60.033 55.000 13.64 4.95 46.06 4.20 F
3246 3831 0.317160 ACCGTCTGTTCGATCAAGCA 59.683 50.000 0.00 0.00 0.00 3.91 F
3947 4850 0.395586 TTGTTGCCTCACCTTGCTGT 60.396 50.000 0.00 0.00 0.00 4.40 F
4807 6097 1.205655 GCTGCCTCTGGGGAATTTTTC 59.794 52.381 0.00 0.00 37.23 2.29 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1655 1715 0.030369 CGAGTATTTCCGGACGGAGG 59.970 60.000 13.64 0.00 46.06 4.30 R
2312 2514 0.032813 ATTTCCGGACGGAGGGAGTA 60.033 55.000 13.64 0.00 46.06 2.59 R
3229 3814 0.363512 CGTGCTTGATCGAACAGACG 59.636 55.000 8.71 8.71 0.00 4.18 R
3407 3992 1.885887 TGCAAGAAAACAGGGGATTCG 59.114 47.619 0.00 0.00 0.00 3.34 R
3492 4077 1.999648 ACACAACATGTCCAAGGCAT 58.000 45.000 0.00 0.00 36.54 4.40 R
4109 5025 7.513505 CGGCATTGAATTACGAATTTCATCAAC 60.514 37.037 0.00 0.00 0.00 3.18 R
4535 5610 0.454196 AAAGGCGTGACACACAAACC 59.546 50.000 6.37 0.00 33.40 3.27 R
5406 7042 0.393537 GGGGAACACAGCTCCAGATG 60.394 60.000 0.00 0.00 37.48 2.90 R
6189 7870 0.238289 CGAACATTTGCACGCTCCTT 59.762 50.000 0.00 0.00 0.00 3.36 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
107 113 1.202580 CCTTCCCTAGCAATGGACTCG 60.203 57.143 0.00 0.00 0.00 4.18
207 252 6.600882 TTTTTAGAGATTCCACTACGGACT 57.399 37.500 0.00 0.00 46.36 3.85
208 253 7.707624 TTTTTAGAGATTCCACTACGGACTA 57.292 36.000 0.00 0.00 46.36 2.59
209 254 6.690194 TTTAGAGATTCCACTACGGACTAC 57.310 41.667 0.00 0.00 46.36 2.73
210 255 4.232188 AGAGATTCCACTACGGACTACA 57.768 45.455 0.00 0.00 46.36 2.74
211 256 4.794334 AGAGATTCCACTACGGACTACAT 58.206 43.478 0.00 0.00 46.36 2.29
212 257 5.938279 AGAGATTCCACTACGGACTACATA 58.062 41.667 0.00 0.00 46.36 2.29
213 258 5.764192 AGAGATTCCACTACGGACTACATAC 59.236 44.000 0.00 0.00 46.36 2.39
214 259 4.514441 AGATTCCACTACGGACTACATACG 59.486 45.833 0.00 0.00 46.36 3.06
215 260 2.564771 TCCACTACGGACTACATACGG 58.435 52.381 0.00 0.00 39.64 4.02
216 261 2.170397 TCCACTACGGACTACATACGGA 59.830 50.000 0.00 0.00 39.64 4.69
217 262 2.547211 CCACTACGGACTACATACGGAG 59.453 54.545 0.00 0.00 43.89 4.63
218 263 3.550437 ACTACGGACTACATACGGAGT 57.450 47.619 0.00 0.00 46.13 3.85
236 281 6.931838 ACGGAGTAAAATGAGTGAATCTACA 58.068 36.000 0.00 0.00 41.94 2.74
237 282 6.812160 ACGGAGTAAAATGAGTGAATCTACAC 59.188 38.462 0.00 0.00 41.94 2.90
250 295 8.764524 AGTGAATCTACACTCTAAAACATGTC 57.235 34.615 0.00 0.00 46.36 3.06
251 296 8.589338 AGTGAATCTACACTCTAAAACATGTCT 58.411 33.333 0.00 0.00 46.36 3.41
252 297 9.856488 GTGAATCTACACTCTAAAACATGTCTA 57.144 33.333 0.00 0.00 37.73 2.59
273 318 8.466798 TGTCTATATACATCCATATGTTGTCCG 58.533 37.037 10.78 0.00 44.07 4.79
274 319 8.467598 GTCTATATACATCCATATGTTGTCCGT 58.532 37.037 10.78 3.94 44.07 4.69
275 320 9.689501 TCTATATACATCCATATGTTGTCCGTA 57.310 33.333 10.78 5.52 44.07 4.02
276 321 9.952188 CTATATACATCCATATGTTGTCCGTAG 57.048 37.037 10.78 8.43 44.07 3.51
277 322 6.665992 ATACATCCATATGTTGTCCGTAGT 57.334 37.500 10.78 0.00 44.07 2.73
278 323 4.693283 ACATCCATATGTTGTCCGTAGTG 58.307 43.478 1.24 0.00 44.07 2.74
279 324 3.812156 TCCATATGTTGTCCGTAGTGG 57.188 47.619 1.24 0.00 40.09 4.00
280 325 6.625433 ACATCCATATGTTGTCCGTAGTGGA 61.625 44.000 1.24 0.00 44.07 4.02
281 326 8.038961 ACATCCATATGTTGTCCGTAGTGGAA 62.039 42.308 1.24 0.00 46.20 3.53
282 327 9.265434 ACATCCATATGTTGTCCGTAGTGGAAT 62.265 40.741 1.24 0.00 46.20 3.01
295 340 8.302515 TCCGTAGTGGAATATCTAAAAAGACT 57.697 34.615 0.00 0.00 46.38 3.24
296 341 8.755977 TCCGTAGTGGAATATCTAAAAAGACTT 58.244 33.333 0.00 0.00 46.38 3.01
375 420 7.516198 AGTGTAGATTCACTCATTTTGCTTT 57.484 32.000 0.00 0.00 44.07 3.51
376 421 7.365741 AGTGTAGATTCACTCATTTTGCTTTG 58.634 34.615 0.00 0.00 44.07 2.77
377 422 7.013655 AGTGTAGATTCACTCATTTTGCTTTGT 59.986 33.333 0.00 0.00 44.07 2.83
378 423 8.289618 GTGTAGATTCACTCATTTTGCTTTGTA 58.710 33.333 0.00 0.00 35.68 2.41
379 424 9.013229 TGTAGATTCACTCATTTTGCTTTGTAT 57.987 29.630 0.00 0.00 0.00 2.29
380 425 9.282247 GTAGATTCACTCATTTTGCTTTGTATG 57.718 33.333 0.00 0.00 0.00 2.39
381 426 7.889469 AGATTCACTCATTTTGCTTTGTATGT 58.111 30.769 0.00 0.00 0.00 2.29
382 427 9.013229 AGATTCACTCATTTTGCTTTGTATGTA 57.987 29.630 0.00 0.00 0.00 2.29
383 428 8.970691 ATTCACTCATTTTGCTTTGTATGTAC 57.029 30.769 0.00 0.00 0.00 2.90
384 429 7.744087 TCACTCATTTTGCTTTGTATGTACT 57.256 32.000 0.00 0.00 0.00 2.73
385 430 8.165239 TCACTCATTTTGCTTTGTATGTACTT 57.835 30.769 0.00 0.00 0.00 2.24
386 431 8.289618 TCACTCATTTTGCTTTGTATGTACTTC 58.710 33.333 0.00 0.00 0.00 3.01
387 432 7.538678 CACTCATTTTGCTTTGTATGTACTTCC 59.461 37.037 0.00 0.00 0.00 3.46
388 433 7.448469 ACTCATTTTGCTTTGTATGTACTTCCT 59.552 33.333 0.00 0.00 0.00 3.36
389 434 7.816640 TCATTTTGCTTTGTATGTACTTCCTC 58.183 34.615 0.00 0.00 0.00 3.71
390 435 6.569179 TTTTGCTTTGTATGTACTTCCTCC 57.431 37.500 0.00 0.00 0.00 4.30
391 436 3.857052 TGCTTTGTATGTACTTCCTCCG 58.143 45.455 0.00 0.00 0.00 4.63
392 437 3.259876 TGCTTTGTATGTACTTCCTCCGT 59.740 43.478 0.00 0.00 0.00 4.69
393 438 4.251268 GCTTTGTATGTACTTCCTCCGTT 58.749 43.478 0.00 0.00 0.00 4.44
394 439 4.694037 GCTTTGTATGTACTTCCTCCGTTT 59.306 41.667 0.00 0.00 0.00 3.60
395 440 5.163884 GCTTTGTATGTACTTCCTCCGTTTC 60.164 44.000 0.00 0.00 0.00 2.78
396 441 5.733620 TTGTATGTACTTCCTCCGTTTCT 57.266 39.130 0.00 0.00 0.00 2.52
397 442 6.839124 TTGTATGTACTTCCTCCGTTTCTA 57.161 37.500 0.00 0.00 0.00 2.10
398 443 6.839124 TGTATGTACTTCCTCCGTTTCTAA 57.161 37.500 0.00 0.00 0.00 2.10
399 444 7.230849 TGTATGTACTTCCTCCGTTTCTAAA 57.769 36.000 0.00 0.00 0.00 1.85
400 445 7.844009 TGTATGTACTTCCTCCGTTTCTAAAT 58.156 34.615 0.00 0.00 0.00 1.40
401 446 8.970020 TGTATGTACTTCCTCCGTTTCTAAATA 58.030 33.333 0.00 0.00 0.00 1.40
402 447 9.978044 GTATGTACTTCCTCCGTTTCTAAATAT 57.022 33.333 0.00 0.00 0.00 1.28
406 451 8.976471 GTACTTCCTCCGTTTCTAAATATAAGC 58.024 37.037 0.00 0.00 0.00 3.09
407 452 6.990939 ACTTCCTCCGTTTCTAAATATAAGCC 59.009 38.462 0.00 0.00 0.00 4.35
408 453 6.742559 TCCTCCGTTTCTAAATATAAGCCT 57.257 37.500 0.00 0.00 0.00 4.58
409 454 7.133133 TCCTCCGTTTCTAAATATAAGCCTT 57.867 36.000 0.00 0.00 0.00 4.35
410 455 7.571025 TCCTCCGTTTCTAAATATAAGCCTTT 58.429 34.615 0.00 0.00 0.00 3.11
411 456 8.050930 TCCTCCGTTTCTAAATATAAGCCTTTT 58.949 33.333 0.00 0.00 0.00 2.27
412 457 8.683615 CCTCCGTTTCTAAATATAAGCCTTTTT 58.316 33.333 0.00 0.00 0.00 1.94
427 472 7.967890 AAGCCTTTTTAGACATTTCAAATGG 57.032 32.000 14.70 0.00 0.00 3.16
428 473 7.301868 AGCCTTTTTAGACATTTCAAATGGA 57.698 32.000 14.70 0.00 0.00 3.41
429 474 7.154656 AGCCTTTTTAGACATTTCAAATGGAC 58.845 34.615 14.70 8.04 0.00 4.02
430 475 7.015584 AGCCTTTTTAGACATTTCAAATGGACT 59.984 33.333 14.70 14.18 0.00 3.85
431 476 8.303876 GCCTTTTTAGACATTTCAAATGGACTA 58.696 33.333 14.70 13.30 0.00 2.59
432 477 9.626045 CCTTTTTAGACATTTCAAATGGACTAC 57.374 33.333 14.70 1.26 0.00 2.73
435 480 9.959749 TTTTAGACATTTCAAATGGACTACAAC 57.040 29.630 14.70 0.00 0.00 3.32
436 481 8.684386 TTAGACATTTCAAATGGACTACAACA 57.316 30.769 14.70 1.25 0.00 3.33
437 482 7.765695 AGACATTTCAAATGGACTACAACAT 57.234 32.000 14.70 0.00 0.00 2.71
438 483 8.862325 AGACATTTCAAATGGACTACAACATA 57.138 30.769 14.70 0.00 0.00 2.29
439 484 8.730680 AGACATTTCAAATGGACTACAACATAC 58.269 33.333 14.70 0.00 0.00 2.39
440 485 7.526608 ACATTTCAAATGGACTACAACATACG 58.473 34.615 14.70 0.00 0.00 3.06
441 486 6.489127 TTTCAAATGGACTACAACATACGG 57.511 37.500 0.00 0.00 0.00 4.02
442 487 5.408880 TCAAATGGACTACAACATACGGA 57.591 39.130 0.00 0.00 0.00 4.69
443 488 5.984725 TCAAATGGACTACAACATACGGAT 58.015 37.500 0.00 0.00 0.00 4.18
444 489 5.815222 TCAAATGGACTACAACATACGGATG 59.185 40.000 5.94 5.94 39.16 3.51
446 491 6.474140 AATGGACTACAACATACGGATGTA 57.526 37.500 15.10 0.00 45.93 2.29
447 492 6.665992 ATGGACTACAACATACGGATGTAT 57.334 37.500 15.10 8.21 45.93 2.29
487 532 7.138692 AGTGTAGATTCACTCATTTTGCTTC 57.861 36.000 0.00 0.00 44.07 3.86
488 533 6.017933 GTGTAGATTCACTCATTTTGCTTCG 58.982 40.000 0.00 0.00 35.68 3.79
492 537 6.779117 AGATTCACTCATTTTGCTTCGTATG 58.221 36.000 0.00 0.00 0.00 2.39
493 538 5.940192 TTCACTCATTTTGCTTCGTATGT 57.060 34.783 0.00 0.00 0.00 2.29
494 539 7.549134 AGATTCACTCATTTTGCTTCGTATGTA 59.451 33.333 0.00 0.00 0.00 2.29
495 540 6.647212 TCACTCATTTTGCTTCGTATGTAG 57.353 37.500 0.00 0.00 0.00 2.74
496 541 6.163476 TCACTCATTTTGCTTCGTATGTAGT 58.837 36.000 0.00 0.00 0.00 2.73
497 542 6.310467 TCACTCATTTTGCTTCGTATGTAGTC 59.690 38.462 0.00 0.00 0.00 2.59
498 543 6.090763 CACTCATTTTGCTTCGTATGTAGTCA 59.909 38.462 0.00 0.00 0.00 3.41
499 544 6.090898 ACTCATTTTGCTTCGTATGTAGTCAC 59.909 38.462 0.00 0.00 0.00 3.67
500 545 6.163476 TCATTTTGCTTCGTATGTAGTCACT 58.837 36.000 0.00 0.00 0.00 3.41
501 546 6.649141 TCATTTTGCTTCGTATGTAGTCACTT 59.351 34.615 0.00 0.00 0.00 3.16
502 547 5.839262 TTTGCTTCGTATGTAGTCACTTG 57.161 39.130 0.00 0.00 0.00 3.16
503 548 4.514781 TGCTTCGTATGTAGTCACTTGT 57.485 40.909 0.00 0.00 0.00 3.16
504 549 4.878439 TGCTTCGTATGTAGTCACTTGTT 58.122 39.130 0.00 0.00 0.00 2.83
505 550 4.684242 TGCTTCGTATGTAGTCACTTGTTG 59.316 41.667 0.00 0.00 0.00 3.33
506 551 4.091509 GCTTCGTATGTAGTCACTTGTTGG 59.908 45.833 0.00 0.00 0.00 3.77
507 552 4.182693 TCGTATGTAGTCACTTGTTGGG 57.817 45.455 0.00 0.00 0.00 4.12
508 553 3.827876 TCGTATGTAGTCACTTGTTGGGA 59.172 43.478 0.00 0.00 0.00 4.37
509 554 4.464951 TCGTATGTAGTCACTTGTTGGGAT 59.535 41.667 0.00 0.00 0.00 3.85
510 555 4.804139 CGTATGTAGTCACTTGTTGGGATC 59.196 45.833 0.00 0.00 0.00 3.36
511 556 5.394224 CGTATGTAGTCACTTGTTGGGATCT 60.394 44.000 0.00 0.00 0.00 2.75
512 557 4.537135 TGTAGTCACTTGTTGGGATCTC 57.463 45.455 0.00 0.00 0.00 2.75
513 558 4.160329 TGTAGTCACTTGTTGGGATCTCT 58.840 43.478 0.00 0.00 0.00 3.10
514 559 5.330233 TGTAGTCACTTGTTGGGATCTCTA 58.670 41.667 0.00 0.00 0.00 2.43
515 560 5.778241 TGTAGTCACTTGTTGGGATCTCTAA 59.222 40.000 0.00 0.00 0.00 2.10
516 561 5.825593 AGTCACTTGTTGGGATCTCTAAA 57.174 39.130 0.00 0.00 0.00 1.85
517 562 6.187727 AGTCACTTGTTGGGATCTCTAAAA 57.812 37.500 0.00 0.00 0.00 1.52
518 563 6.601332 AGTCACTTGTTGGGATCTCTAAAAA 58.399 36.000 0.00 0.00 0.00 1.94
519 564 6.712547 AGTCACTTGTTGGGATCTCTAAAAAG 59.287 38.462 0.00 1.88 0.00 2.27
520 565 6.710744 GTCACTTGTTGGGATCTCTAAAAAGA 59.289 38.462 13.48 0.00 0.00 2.52
521 566 6.710744 TCACTTGTTGGGATCTCTAAAAAGAC 59.289 38.462 13.48 0.00 0.00 3.01
522 567 6.712547 CACTTGTTGGGATCTCTAAAAAGACT 59.287 38.462 13.48 0.00 0.00 3.24
523 568 7.229506 CACTTGTTGGGATCTCTAAAAAGACTT 59.770 37.037 13.48 0.00 0.00 3.01
524 569 8.437575 ACTTGTTGGGATCTCTAAAAAGACTTA 58.562 33.333 13.48 0.00 0.00 2.24
525 570 9.454859 CTTGTTGGGATCTCTAAAAAGACTTAT 57.545 33.333 0.00 0.00 0.00 1.73
537 582 9.169592 TCTAAAAAGACTTATATTTGGGAACGG 57.830 33.333 0.00 0.00 0.00 4.44
538 583 9.169592 CTAAAAAGACTTATATTTGGGAACGGA 57.830 33.333 0.00 0.00 0.00 4.69
539 584 7.625828 AAAAGACTTATATTTGGGAACGGAG 57.374 36.000 0.00 0.00 0.00 4.63
540 585 5.291905 AGACTTATATTTGGGAACGGAGG 57.708 43.478 0.00 0.00 0.00 4.30
541 586 4.102681 AGACTTATATTTGGGAACGGAGGG 59.897 45.833 0.00 0.00 0.00 4.30
542 587 4.042174 ACTTATATTTGGGAACGGAGGGA 58.958 43.478 0.00 0.00 0.00 4.20
611 657 6.224584 GGGGAGTACTACTCAGCAAATATTC 58.775 44.000 16.49 0.00 46.79 1.75
621 667 4.304110 TCAGCAAATATTCCGACGATACC 58.696 43.478 0.00 0.00 0.00 2.73
638 684 4.083855 CGATACCGCATTCGTACTAGGTTA 60.084 45.833 0.00 0.00 33.58 2.85
644 690 6.183360 ACCGCATTCGTACTAGGTTAAGTATT 60.183 38.462 0.00 0.00 34.59 1.89
680 726 4.569162 GTGGTTTTGTCTTTGGTAAAAGGC 59.431 41.667 0.00 0.00 46.28 4.35
724 770 3.005554 CCAGCAATCAAGTCTGGTACTG 58.994 50.000 0.00 0.00 41.76 2.74
726 772 2.026822 AGCAATCAAGTCTGGTACTGGG 60.027 50.000 0.00 0.00 38.88 4.45
750 796 7.315890 GGAAACAGTAGGATTGATTTTTCTGG 58.684 38.462 0.00 0.00 0.00 3.86
751 797 6.840780 AACAGTAGGATTGATTTTTCTGGG 57.159 37.500 0.00 0.00 0.00 4.45
761 807 4.335416 TGATTTTTCTGGGTCATCTGGAC 58.665 43.478 0.00 0.00 46.20 4.02
796 842 6.350780 GGCTTGATTCATCTTTGGTGAGAATT 60.351 38.462 0.00 0.00 0.00 2.17
872 921 6.644592 GTGAAAACAATGCCTGCTAAATTGTA 59.355 34.615 6.71 0.00 42.24 2.41
882 931 6.995091 TGCCTGCTAAATTGTAAATTGGTTTT 59.005 30.769 0.00 0.00 0.00 2.43
974 1034 4.641541 CCATCCAGTAGATTGTGAATTGCA 59.358 41.667 0.00 0.00 30.59 4.08
1015 1075 1.406069 CCACAATGGCTCTAACGCTCT 60.406 52.381 0.00 0.00 0.00 4.09
1145 1205 0.111061 AGTGAGCCCAAATCAGTGCA 59.889 50.000 0.00 0.00 0.00 4.57
1423 1483 4.097551 TCCATGACATCCAAGTTTGACA 57.902 40.909 0.00 0.00 0.00 3.58
1608 1668 3.336468 CAAGCTGCTTCACTCTGAATCT 58.664 45.455 12.82 0.00 35.59 2.40
1655 1715 9.597170 CCTTGTTATTTCCTAACTAAGTACTCC 57.403 37.037 0.00 0.00 40.40 3.85
1656 1716 9.597170 CTTGTTATTTCCTAACTAAGTACTCCC 57.403 37.037 0.00 0.00 40.40 4.30
1657 1717 8.906238 TGTTATTTCCTAACTAAGTACTCCCT 57.094 34.615 0.00 0.00 40.40 4.20
1658 1718 8.975295 TGTTATTTCCTAACTAAGTACTCCCTC 58.025 37.037 0.00 0.00 40.40 4.30
1659 1719 8.420222 GTTATTTCCTAACTAAGTACTCCCTCC 58.580 40.741 0.00 0.00 37.36 4.30
1660 1720 4.162040 TCCTAACTAAGTACTCCCTCCG 57.838 50.000 0.00 0.00 0.00 4.63
1661 1721 3.525199 TCCTAACTAAGTACTCCCTCCGT 59.475 47.826 0.00 0.00 0.00 4.69
1662 1722 3.882288 CCTAACTAAGTACTCCCTCCGTC 59.118 52.174 0.00 0.00 0.00 4.79
1663 1723 2.433662 ACTAAGTACTCCCTCCGTCC 57.566 55.000 0.00 0.00 0.00 4.79
1664 1724 1.307097 CTAAGTACTCCCTCCGTCCG 58.693 60.000 0.00 0.00 0.00 4.79
1665 1725 0.107017 TAAGTACTCCCTCCGTCCGG 60.107 60.000 0.00 0.00 0.00 5.14
1666 1726 1.856539 AAGTACTCCCTCCGTCCGGA 61.857 60.000 0.00 0.00 42.90 5.14
1667 1727 1.379044 GTACTCCCTCCGTCCGGAA 60.379 63.158 5.23 0.00 44.66 4.30
1668 1728 0.967380 GTACTCCCTCCGTCCGGAAA 60.967 60.000 5.23 0.00 44.66 3.13
1669 1729 0.032813 TACTCCCTCCGTCCGGAAAT 60.033 55.000 5.23 0.00 44.66 2.17
1670 1730 0.032813 ACTCCCTCCGTCCGGAAATA 60.033 55.000 5.23 0.00 44.66 1.40
1671 1731 0.388294 CTCCCTCCGTCCGGAAATAC 59.612 60.000 5.23 0.00 44.66 1.89
1672 1732 0.032813 TCCCTCCGTCCGGAAATACT 60.033 55.000 5.23 0.00 44.66 2.12
1673 1733 0.388294 CCCTCCGTCCGGAAATACTC 59.612 60.000 5.23 0.00 44.66 2.59
1674 1734 0.030369 CCTCCGTCCGGAAATACTCG 59.970 60.000 5.23 3.90 44.66 4.18
1675 1735 0.737219 CTCCGTCCGGAAATACTCGT 59.263 55.000 5.23 0.00 44.66 4.18
1676 1736 0.734889 TCCGTCCGGAAATACTCGTC 59.265 55.000 5.23 0.00 42.05 4.20
1677 1737 0.590732 CCGTCCGGAAATACTCGTCG 60.591 60.000 5.23 1.25 37.50 5.12
1678 1738 0.590732 CGTCCGGAAATACTCGTCGG 60.591 60.000 5.23 0.00 41.80 4.79
1679 1739 0.734889 GTCCGGAAATACTCGTCGGA 59.265 55.000 5.23 0.00 46.06 4.55
1680 1740 1.019673 TCCGGAAATACTCGTCGGAG 58.980 55.000 0.00 0.00 43.84 4.63
1681 1741 1.019673 CCGGAAATACTCGTCGGAGA 58.980 55.000 0.00 0.00 43.27 3.71
1682 1742 1.402968 CCGGAAATACTCGTCGGAGAA 59.597 52.381 0.00 0.00 43.27 2.87
1683 1743 2.159338 CCGGAAATACTCGTCGGAGAAA 60.159 50.000 0.00 0.00 43.27 2.52
1684 1744 3.490419 CCGGAAATACTCGTCGGAGAAAT 60.490 47.826 0.00 0.00 43.27 2.17
1685 1745 3.486108 CGGAAATACTCGTCGGAGAAATG 59.514 47.826 0.00 0.00 43.27 2.32
1686 1746 3.245519 GGAAATACTCGTCGGAGAAATGC 59.754 47.826 0.00 0.00 43.27 3.56
1687 1747 3.520290 AATACTCGTCGGAGAAATGCA 57.480 42.857 0.00 0.00 43.27 3.96
1688 1748 3.735237 ATACTCGTCGGAGAAATGCAT 57.265 42.857 0.00 0.00 43.27 3.96
1689 1749 4.848562 ATACTCGTCGGAGAAATGCATA 57.151 40.909 0.00 0.00 43.27 3.14
1690 1750 3.520290 ACTCGTCGGAGAAATGCATAA 57.480 42.857 0.00 0.00 43.27 1.90
1691 1751 3.857052 ACTCGTCGGAGAAATGCATAAA 58.143 40.909 0.00 0.00 43.27 1.40
1692 1752 4.250464 ACTCGTCGGAGAAATGCATAAAA 58.750 39.130 0.00 0.00 43.27 1.52
1693 1753 4.693566 ACTCGTCGGAGAAATGCATAAAAA 59.306 37.500 0.00 0.00 43.27 1.94
1694 1754 5.354234 ACTCGTCGGAGAAATGCATAAAAAT 59.646 36.000 0.00 0.00 43.27 1.82
1695 1755 5.568482 TCGTCGGAGAAATGCATAAAAATG 58.432 37.500 0.00 0.00 39.69 2.32
1696 1756 4.734854 CGTCGGAGAAATGCATAAAAATGG 59.265 41.667 0.00 0.00 39.69 3.16
1697 1757 5.448496 CGTCGGAGAAATGCATAAAAATGGA 60.448 40.000 0.00 0.00 39.69 3.41
1698 1758 6.507023 GTCGGAGAAATGCATAAAAATGGAT 58.493 36.000 0.00 0.00 39.69 3.41
1699 1759 6.418819 GTCGGAGAAATGCATAAAAATGGATG 59.581 38.462 0.00 0.00 39.69 3.51
1700 1760 6.096705 TCGGAGAAATGCATAAAAATGGATGT 59.903 34.615 0.00 0.00 32.82 3.06
1701 1761 7.284261 TCGGAGAAATGCATAAAAATGGATGTA 59.716 33.333 0.00 0.00 32.82 2.29
1702 1762 8.084073 CGGAGAAATGCATAAAAATGGATGTAT 58.916 33.333 0.00 0.00 32.82 2.29
1703 1763 9.415544 GGAGAAATGCATAAAAATGGATGTATC 57.584 33.333 0.00 0.00 32.82 2.24
1738 1798 9.915629 AAATACGTCTAGATACATCCATTTCTC 57.084 33.333 0.00 0.00 0.00 2.87
1739 1799 6.334102 ACGTCTAGATACATCCATTTCTCC 57.666 41.667 0.00 0.00 0.00 3.71
1740 1800 5.048643 ACGTCTAGATACATCCATTTCTCCG 60.049 44.000 0.00 0.00 0.00 4.63
1741 1801 5.181433 CGTCTAGATACATCCATTTCTCCGA 59.819 44.000 0.00 0.00 0.00 4.55
1742 1802 6.383415 GTCTAGATACATCCATTTCTCCGAC 58.617 44.000 0.00 0.00 0.00 4.79
1743 1803 6.016192 GTCTAGATACATCCATTTCTCCGACA 60.016 42.308 0.00 0.00 0.00 4.35
1744 1804 5.614324 AGATACATCCATTTCTCCGACAA 57.386 39.130 0.00 0.00 0.00 3.18
1745 1805 5.605534 AGATACATCCATTTCTCCGACAAG 58.394 41.667 0.00 0.00 0.00 3.16
1746 1806 3.703001 ACATCCATTTCTCCGACAAGT 57.297 42.857 0.00 0.00 0.00 3.16
1747 1807 4.819105 ACATCCATTTCTCCGACAAGTA 57.181 40.909 0.00 0.00 0.00 2.24
1748 1808 5.359194 ACATCCATTTCTCCGACAAGTAT 57.641 39.130 0.00 0.00 0.00 2.12
1749 1809 5.745227 ACATCCATTTCTCCGACAAGTATT 58.255 37.500 0.00 0.00 0.00 1.89
1750 1810 6.180472 ACATCCATTTCTCCGACAAGTATTT 58.820 36.000 0.00 0.00 0.00 1.40
1751 1811 7.335627 ACATCCATTTCTCCGACAAGTATTTA 58.664 34.615 0.00 0.00 0.00 1.40
1752 1812 7.280205 ACATCCATTTCTCCGACAAGTATTTAC 59.720 37.037 0.00 0.00 0.00 2.01
1753 1813 5.808540 TCCATTTCTCCGACAAGTATTTACG 59.191 40.000 0.00 0.00 0.00 3.18
1754 1814 5.006358 CCATTTCTCCGACAAGTATTTACGG 59.994 44.000 0.00 0.00 44.09 4.02
1756 1816 4.361451 TCTCCGACAAGTATTTACGGAC 57.639 45.455 12.08 0.00 45.87 4.79
1757 1817 3.103738 CTCCGACAAGTATTTACGGACG 58.896 50.000 12.08 7.23 45.87 4.79
1758 1818 2.159393 TCCGACAAGTATTTACGGACGG 60.159 50.000 12.08 14.71 45.87 4.79
1759 1819 2.159393 CCGACAAGTATTTACGGACGGA 60.159 50.000 15.32 0.00 45.31 4.69
1760 1820 3.103738 CGACAAGTATTTACGGACGGAG 58.896 50.000 0.00 0.00 0.00 4.63
1761 1821 3.442100 GACAAGTATTTACGGACGGAGG 58.558 50.000 0.00 0.00 0.00 4.30
1762 1822 2.167075 ACAAGTATTTACGGACGGAGGG 59.833 50.000 0.00 0.00 0.00 4.30
1889 1965 5.640732 ACATTTCTAAACCGATGCATTCAC 58.359 37.500 0.00 0.00 0.00 3.18
1893 1969 5.697473 TCTAAACCGATGCATTCACAAAA 57.303 34.783 0.00 0.00 0.00 2.44
1904 1980 5.472148 TGCATTCACAAAAGCTAAAGATGG 58.528 37.500 0.00 0.00 30.52 3.51
1953 2029 4.082733 CGAACTCTCTGACACATTGGACTA 60.083 45.833 0.00 0.00 0.00 2.59
2141 2331 7.634671 TTAATTGCACTTGATGTCAGATCAT 57.365 32.000 0.00 0.00 0.00 2.45
2204 2403 7.625185 GCCTTCTCAAATCTGATACAAGAACAC 60.625 40.741 0.00 0.00 0.00 3.32
2215 2415 1.210967 ACAAGAACACGAGGTTTGGGA 59.789 47.619 0.00 0.00 40.63 4.37
2225 2425 4.517453 CACGAGGTTTGGGAAATCTGTAAA 59.483 41.667 0.00 0.00 30.38 2.01
2312 2514 6.487828 TCCTCCAATCTTGACAGAAAATCAT 58.512 36.000 0.00 0.00 30.76 2.45
2314 2516 7.554118 TCCTCCAATCTTGACAGAAAATCATAC 59.446 37.037 0.00 0.00 30.76 2.39
2315 2517 7.555554 CCTCCAATCTTGACAGAAAATCATACT 59.444 37.037 0.00 0.00 30.76 2.12
2316 2518 8.498054 TCCAATCTTGACAGAAAATCATACTC 57.502 34.615 0.00 0.00 30.76 2.59
2317 2519 7.554118 TCCAATCTTGACAGAAAATCATACTCC 59.446 37.037 0.00 0.00 30.76 3.85
2318 2520 7.201767 CCAATCTTGACAGAAAATCATACTCCC 60.202 40.741 0.00 0.00 30.76 4.30
2319 2521 6.627087 TCTTGACAGAAAATCATACTCCCT 57.373 37.500 0.00 0.00 0.00 4.20
2320 2522 6.644347 TCTTGACAGAAAATCATACTCCCTC 58.356 40.000 0.00 0.00 0.00 4.30
2321 2523 5.359194 TGACAGAAAATCATACTCCCTCC 57.641 43.478 0.00 0.00 0.00 4.30
2322 2524 4.141937 TGACAGAAAATCATACTCCCTCCG 60.142 45.833 0.00 0.00 0.00 4.63
2323 2525 3.775316 ACAGAAAATCATACTCCCTCCGT 59.225 43.478 0.00 0.00 0.00 4.69
2324 2526 4.141914 ACAGAAAATCATACTCCCTCCGTC 60.142 45.833 0.00 0.00 0.00 4.79
2325 2527 3.388350 AGAAAATCATACTCCCTCCGTCC 59.612 47.826 0.00 0.00 0.00 4.79
2326 2528 1.329256 AATCATACTCCCTCCGTCCG 58.671 55.000 0.00 0.00 0.00 4.79
2327 2529 0.539901 ATCATACTCCCTCCGTCCGG 60.540 60.000 0.00 0.00 0.00 5.14
2328 2530 1.152819 CATACTCCCTCCGTCCGGA 60.153 63.158 0.00 0.00 42.90 5.14
2329 2531 0.754217 CATACTCCCTCCGTCCGGAA 60.754 60.000 5.23 0.00 44.66 4.30
2330 2532 0.032813 ATACTCCCTCCGTCCGGAAA 60.033 55.000 5.23 0.00 44.66 3.13
2331 2533 0.032813 TACTCCCTCCGTCCGGAAAT 60.033 55.000 5.23 0.00 44.66 2.17
2332 2534 0.032813 ACTCCCTCCGTCCGGAAATA 60.033 55.000 5.23 0.00 44.66 1.40
2333 2535 0.388294 CTCCCTCCGTCCGGAAATAC 59.612 60.000 5.23 0.00 44.66 1.89
2334 2536 0.032813 TCCCTCCGTCCGGAAATACT 60.033 55.000 5.23 0.00 44.66 2.12
2335 2537 0.828677 CCCTCCGTCCGGAAATACTT 59.171 55.000 5.23 0.00 44.66 2.24
2336 2538 1.472728 CCCTCCGTCCGGAAATACTTG 60.473 57.143 5.23 0.00 44.66 3.16
2337 2539 1.206371 CCTCCGTCCGGAAATACTTGT 59.794 52.381 5.23 0.00 44.66 3.16
2338 2540 2.537401 CTCCGTCCGGAAATACTTGTC 58.463 52.381 5.23 0.00 44.66 3.18
2339 2541 1.894466 TCCGTCCGGAAATACTTGTCA 59.106 47.619 5.23 0.00 42.05 3.58
2340 2542 2.094390 TCCGTCCGGAAATACTTGTCAG 60.094 50.000 5.23 0.00 42.05 3.51
2341 2543 2.094390 CCGTCCGGAAATACTTGTCAGA 60.094 50.000 5.23 0.00 37.50 3.27
2342 2544 3.179830 CGTCCGGAAATACTTGTCAGAG 58.820 50.000 5.23 0.00 0.00 3.35
2343 2545 3.119602 CGTCCGGAAATACTTGTCAGAGA 60.120 47.826 5.23 0.00 0.00 3.10
2344 2546 4.617530 CGTCCGGAAATACTTGTCAGAGAA 60.618 45.833 5.23 0.00 0.00 2.87
2345 2547 5.235516 GTCCGGAAATACTTGTCAGAGAAA 58.764 41.667 5.23 0.00 0.00 2.52
2346 2548 5.875359 GTCCGGAAATACTTGTCAGAGAAAT 59.125 40.000 5.23 0.00 0.00 2.17
2347 2549 5.874810 TCCGGAAATACTTGTCAGAGAAATG 59.125 40.000 0.00 0.00 0.00 2.32
2348 2550 5.447818 CCGGAAATACTTGTCAGAGAAATGC 60.448 44.000 0.00 0.00 0.00 3.56
2349 2551 5.122239 CGGAAATACTTGTCAGAGAAATGCA 59.878 40.000 0.00 0.00 0.00 3.96
2350 2552 6.183360 CGGAAATACTTGTCAGAGAAATGCAT 60.183 38.462 0.00 0.00 0.00 3.96
2351 2553 7.011389 CGGAAATACTTGTCAGAGAAATGCATA 59.989 37.037 0.00 0.00 0.00 3.14
2352 2554 8.677300 GGAAATACTTGTCAGAGAAATGCATAA 58.323 33.333 0.00 0.00 0.00 1.90
2357 2559 8.752766 ACTTGTCAGAGAAATGCATAAAAATG 57.247 30.769 0.00 0.00 0.00 2.32
2358 2560 7.816031 ACTTGTCAGAGAAATGCATAAAAATGG 59.184 33.333 0.00 0.00 0.00 3.16
2359 2561 7.465353 TGTCAGAGAAATGCATAAAAATGGA 57.535 32.000 0.00 0.00 0.00 3.41
2360 2562 8.070034 TGTCAGAGAAATGCATAAAAATGGAT 57.930 30.769 0.00 0.00 33.93 3.41
2361 2563 7.977293 TGTCAGAGAAATGCATAAAAATGGATG 59.023 33.333 0.00 0.00 32.82 3.51
2362 2564 7.977853 GTCAGAGAAATGCATAAAAATGGATGT 59.022 33.333 0.00 0.00 32.82 3.06
2363 2565 9.187996 TCAGAGAAATGCATAAAAATGGATGTA 57.812 29.630 0.00 0.00 32.82 2.29
2364 2566 9.976511 CAGAGAAATGCATAAAAATGGATGTAT 57.023 29.630 0.00 0.00 32.82 2.29
2372 2574 9.851686 TGCATAAAAATGGATGTATCTAGAACT 57.148 29.630 0.00 0.00 0.00 3.01
2399 2601 8.423906 AAATACGTCTAGATACATCCATTCCT 57.576 34.615 0.00 0.00 0.00 3.36
2400 2602 5.968528 ACGTCTAGATACATCCATTCCTC 57.031 43.478 0.00 0.00 0.00 3.71
2401 2603 5.636123 ACGTCTAGATACATCCATTCCTCT 58.364 41.667 0.00 0.00 0.00 3.69
2402 2604 5.475220 ACGTCTAGATACATCCATTCCTCTG 59.525 44.000 0.00 0.00 0.00 3.35
2403 2605 5.707764 CGTCTAGATACATCCATTCCTCTGA 59.292 44.000 0.00 0.00 0.00 3.27
2404 2606 6.348950 CGTCTAGATACATCCATTCCTCTGAC 60.349 46.154 0.00 0.00 0.00 3.51
2405 2607 6.491745 GTCTAGATACATCCATTCCTCTGACA 59.508 42.308 0.00 0.00 0.00 3.58
2406 2608 7.014711 GTCTAGATACATCCATTCCTCTGACAA 59.985 40.741 0.00 0.00 0.00 3.18
2407 2609 6.172136 AGATACATCCATTCCTCTGACAAG 57.828 41.667 0.00 0.00 0.00 3.16
2408 2610 5.664908 AGATACATCCATTCCTCTGACAAGT 59.335 40.000 0.00 0.00 0.00 3.16
2409 2611 6.841229 AGATACATCCATTCCTCTGACAAGTA 59.159 38.462 0.00 0.00 0.00 2.24
2410 2612 5.965033 ACATCCATTCCTCTGACAAGTAT 57.035 39.130 0.00 0.00 0.00 2.12
2411 2613 6.319048 ACATCCATTCCTCTGACAAGTATT 57.681 37.500 0.00 0.00 0.00 1.89
2412 2614 6.725364 ACATCCATTCCTCTGACAAGTATTT 58.275 36.000 0.00 0.00 0.00 1.40
2413 2615 6.825721 ACATCCATTCCTCTGACAAGTATTTC 59.174 38.462 0.00 0.00 0.00 2.17
2414 2616 5.745227 TCCATTCCTCTGACAAGTATTTCC 58.255 41.667 0.00 0.00 0.00 3.13
2415 2617 4.572389 CCATTCCTCTGACAAGTATTTCCG 59.428 45.833 0.00 0.00 0.00 4.30
2416 2618 3.887621 TCCTCTGACAAGTATTTCCGG 57.112 47.619 0.00 0.00 0.00 5.14
2417 2619 3.437213 TCCTCTGACAAGTATTTCCGGA 58.563 45.455 0.00 0.00 0.00 5.14
2418 2620 3.194968 TCCTCTGACAAGTATTTCCGGAC 59.805 47.826 1.83 0.00 0.00 4.79
2419 2621 3.179830 CTCTGACAAGTATTTCCGGACG 58.820 50.000 1.83 0.00 0.00 4.79
2420 2622 2.094390 TCTGACAAGTATTTCCGGACGG 60.094 50.000 1.83 3.96 0.00 4.79
2421 2623 1.894466 TGACAAGTATTTCCGGACGGA 59.106 47.619 1.83 9.76 43.52 4.69
2422 2624 2.094390 TGACAAGTATTTCCGGACGGAG 60.094 50.000 13.64 3.15 46.06 4.63
2423 2625 1.206371 ACAAGTATTTCCGGACGGAGG 59.794 52.381 13.64 0.00 46.06 4.30
2424 2626 0.828677 AAGTATTTCCGGACGGAGGG 59.171 55.000 13.64 0.00 46.06 4.30
2425 2627 0.032813 AGTATTTCCGGACGGAGGGA 60.033 55.000 13.64 4.95 46.06 4.20
2426 2628 0.388294 GTATTTCCGGACGGAGGGAG 59.612 60.000 13.64 0.00 46.06 4.30
2513 2880 6.649141 TCATTGTACTGGTAGCTACAACTTTG 59.351 38.462 24.75 15.74 36.05 2.77
2541 2909 5.125417 TCATTAAAGTGGTTGCTATTCTGGC 59.875 40.000 0.00 0.00 0.00 4.85
2668 3036 3.216230 AGGGTTGTTAGATACCTGGGT 57.784 47.619 0.00 0.00 34.75 4.51
2731 3099 0.468226 TCAATGTATCTGTCCGGCCC 59.532 55.000 0.00 0.00 0.00 5.80
2826 3194 9.679661 TGTATTAATATATTCCATGCCGACAAT 57.320 29.630 0.00 0.00 0.00 2.71
2827 3195 9.935682 GTATTAATATATTCCATGCCGACAATG 57.064 33.333 0.00 0.00 0.00 2.82
2885 3254 1.134401 ACTTATGTCCGGAGCACATGG 60.134 52.381 15.59 11.03 0.00 3.66
3184 3769 0.798776 CGTCCTGTCTTGTCATTGGC 59.201 55.000 0.00 0.00 0.00 4.52
3197 3782 4.346730 TGTCATTGGCTGAATTCATCCTT 58.653 39.130 24.75 12.54 35.07 3.36
3246 3831 0.317160 ACCGTCTGTTCGATCAAGCA 59.683 50.000 0.00 0.00 0.00 3.91
3384 3969 4.809496 CCTGCTCGGCCTGCCAAT 62.809 66.667 13.82 0.00 35.37 3.16
3407 3992 2.760387 GCAGTTGCTGAGGCTTTGCC 62.760 60.000 9.57 0.00 43.17 4.52
3569 4154 1.866601 CAGCGTTCAGATGTGTGTTCA 59.133 47.619 0.00 0.00 0.00 3.18
3687 4531 4.088634 AGCAACCATGGACATTACAACAT 58.911 39.130 21.47 0.00 0.00 2.71
3947 4850 0.395586 TTGTTGCCTCACCTTGCTGT 60.396 50.000 0.00 0.00 0.00 4.40
4109 5025 5.359716 AGTTGTTCTGACTAGTGAGTACG 57.640 43.478 12.93 0.00 35.45 3.67
4697 5785 7.536622 CAGTCTGAAGATTTGCATAGTTTTCAC 59.463 37.037 0.00 0.00 0.00 3.18
4807 6097 1.205655 GCTGCCTCTGGGGAATTTTTC 59.794 52.381 0.00 0.00 37.23 2.29
4890 6181 9.665264 CTTCCTGACACTTTCTGTTATAAAAAC 57.335 33.333 0.00 0.00 31.03 2.43
4956 6249 1.948104 TACCATTTCCGATTCTGCCG 58.052 50.000 0.00 0.00 0.00 5.69
4998 6299 1.886886 TTACCAAAGGCGGAACTGTC 58.113 50.000 0.00 0.00 0.00 3.51
5406 7042 3.684305 GGCCAGGTTTGTGATATTTTTGC 59.316 43.478 0.00 0.00 0.00 3.68
5640 7308 7.607991 AGTGAACCATCAGATTAACTAAAGTGG 59.392 37.037 0.00 0.00 35.88 4.00
5646 7314 5.812286 TCAGATTAACTAAAGTGGAACCCC 58.188 41.667 0.00 0.00 37.80 4.95
5817 7492 4.559153 AGTGGATTTTGGAAAAGCAATCG 58.441 39.130 2.82 0.00 36.09 3.34
5867 7542 4.732647 GCATGGTATGTGTTTGAGCTGATG 60.733 45.833 0.00 0.00 0.00 3.07
5878 7558 0.534652 GAGCTGATGATGGAGTGGCC 60.535 60.000 0.00 0.00 37.10 5.36
5978 7658 9.476202 AGCTGTAAACTCATTTTTAATTTGGAC 57.524 29.630 0.00 0.00 0.00 4.02
6010 7690 2.614057 CGATCCTGAATGTGGCTTTACC 59.386 50.000 0.00 0.00 39.84 2.85
6018 7698 6.418057 TGAATGTGGCTTTACCTTTTGAAT 57.582 33.333 0.00 0.00 40.22 2.57
6057 7737 4.463891 CCCTTGAGTTTGTTCCAGCATTAT 59.536 41.667 0.00 0.00 0.00 1.28
6133 7813 0.745845 CCGGGCTCATCTCACTTTGG 60.746 60.000 0.00 0.00 0.00 3.28
6189 7870 0.108472 CGAAGATGCTCAGGTGCTCA 60.108 55.000 0.00 0.00 0.00 4.26
6241 7922 6.443849 TGGACATTCTAGGACCTTAGACAAAT 59.556 38.462 0.00 0.00 29.67 2.32
6242 7923 7.037586 TGGACATTCTAGGACCTTAGACAAATT 60.038 37.037 0.00 0.00 29.67 1.82
6243 7924 7.829706 GGACATTCTAGGACCTTAGACAAATTT 59.170 37.037 0.00 0.00 29.67 1.82
6244 7925 9.232473 GACATTCTAGGACCTTAGACAAATTTT 57.768 33.333 0.00 0.00 29.67 1.82
6245 7926 9.588096 ACATTCTAGGACCTTAGACAAATTTTT 57.412 29.630 0.00 0.00 29.67 1.94
6270 7951 9.425248 TTTTTCCGGATCCTAATAGTACTCTTA 57.575 33.333 4.15 0.00 0.00 2.10
6274 7955 8.388589 TCCGGATCCTAATAGTACTCTTATTCA 58.611 37.037 10.75 0.00 0.00 2.57
6455 8139 2.885644 CGACCAGGCACCGAATCG 60.886 66.667 0.00 0.00 0.00 3.34
6456 8140 3.195698 GACCAGGCACCGAATCGC 61.196 66.667 0.00 0.00 0.00 4.58
6468 8152 1.202533 CCGAATCGCCACACTCCTTAT 60.203 52.381 0.00 0.00 0.00 1.73
6539 8223 8.570488 CCATTGCAATATGCTACTCTTTTCATA 58.430 33.333 12.53 0.00 45.31 2.15
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
11 12 0.875728 CCGCCGGTAGACAGAGATAG 59.124 60.000 1.90 0.00 0.00 2.08
12 13 0.536687 CCCGCCGGTAGACAGAGATA 60.537 60.000 1.90 0.00 0.00 1.98
55 56 2.369001 GGGAGGGGAGCTGTACCT 59.631 66.667 0.00 0.00 37.31 3.08
107 113 4.616181 ATTACAAAGTTGGCATACGAGC 57.384 40.909 0.00 0.00 0.00 5.03
160 205 7.672122 AAGACTTATATTTAGGAACCGAGGT 57.328 36.000 0.00 0.00 0.00 3.85
196 241 2.547211 CTCCGTATGTAGTCCGTAGTGG 59.453 54.545 0.00 0.00 40.09 4.00
197 242 3.201290 ACTCCGTATGTAGTCCGTAGTG 58.799 50.000 0.00 0.00 0.00 2.74
198 243 3.550437 ACTCCGTATGTAGTCCGTAGT 57.450 47.619 0.00 0.00 0.00 2.73
199 244 5.991328 TTTACTCCGTATGTAGTCCGTAG 57.009 43.478 0.00 0.00 0.00 3.51
200 245 6.542005 TCATTTTACTCCGTATGTAGTCCGTA 59.458 38.462 0.00 0.00 0.00 4.02
201 246 5.357878 TCATTTTACTCCGTATGTAGTCCGT 59.642 40.000 0.00 0.00 0.00 4.69
202 247 5.824429 TCATTTTACTCCGTATGTAGTCCG 58.176 41.667 0.00 0.00 0.00 4.79
203 248 6.696148 CACTCATTTTACTCCGTATGTAGTCC 59.304 42.308 0.00 0.00 0.00 3.85
204 249 7.478322 TCACTCATTTTACTCCGTATGTAGTC 58.522 38.462 0.00 0.00 0.00 2.59
205 250 7.400599 TCACTCATTTTACTCCGTATGTAGT 57.599 36.000 0.00 0.00 0.00 2.73
206 251 8.873215 ATTCACTCATTTTACTCCGTATGTAG 57.127 34.615 0.00 0.00 0.00 2.74
207 252 8.692710 AGATTCACTCATTTTACTCCGTATGTA 58.307 33.333 0.00 0.00 0.00 2.29
208 253 7.556844 AGATTCACTCATTTTACTCCGTATGT 58.443 34.615 0.00 0.00 0.00 2.29
209 254 8.969267 GTAGATTCACTCATTTTACTCCGTATG 58.031 37.037 0.00 0.00 0.00 2.39
210 255 8.692710 TGTAGATTCACTCATTTTACTCCGTAT 58.307 33.333 0.00 0.00 0.00 3.06
211 256 7.972277 GTGTAGATTCACTCATTTTACTCCGTA 59.028 37.037 0.00 0.00 35.68 4.02
212 257 6.812160 GTGTAGATTCACTCATTTTACTCCGT 59.188 38.462 0.00 0.00 35.68 4.69
213 258 7.036220 AGTGTAGATTCACTCATTTTACTCCG 58.964 38.462 0.00 0.00 44.07 4.63
226 271 8.764524 AGACATGTTTTAGAGTGTAGATTCAC 57.235 34.615 0.00 0.00 38.46 3.18
247 292 8.466798 CGGACAACATATGGATGTATATAGACA 58.533 37.037 14.22 2.07 45.93 3.41
248 293 8.467598 ACGGACAACATATGGATGTATATAGAC 58.532 37.037 14.22 0.00 45.93 2.59
249 294 8.589701 ACGGACAACATATGGATGTATATAGA 57.410 34.615 14.22 0.00 45.93 1.98
250 295 9.952188 CTACGGACAACATATGGATGTATATAG 57.048 37.037 14.22 11.86 45.93 1.31
251 296 9.470399 ACTACGGACAACATATGGATGTATATA 57.530 33.333 14.22 7.76 45.93 0.86
252 297 8.251026 CACTACGGACAACATATGGATGTATAT 58.749 37.037 14.22 7.19 45.93 0.86
253 298 7.309560 CCACTACGGACAACATATGGATGTATA 60.310 40.741 14.22 8.27 40.78 1.47
254 299 6.455647 CACTACGGACAACATATGGATGTAT 58.544 40.000 14.22 7.72 45.93 2.29
255 300 5.221362 CCACTACGGACAACATATGGATGTA 60.221 44.000 14.22 4.95 40.78 2.29
256 301 4.442893 CCACTACGGACAACATATGGATGT 60.443 45.833 14.16 14.16 42.60 3.06
257 302 4.058124 CCACTACGGACAACATATGGATG 58.942 47.826 7.80 8.32 36.51 3.51
258 303 3.964688 TCCACTACGGACAACATATGGAT 59.035 43.478 7.80 0.00 39.64 3.41
259 304 3.367321 TCCACTACGGACAACATATGGA 58.633 45.455 7.80 0.00 39.64 3.41
260 305 3.812156 TCCACTACGGACAACATATGG 57.188 47.619 7.80 0.00 39.64 2.74
261 306 7.378966 AGATATTCCACTACGGACAACATATG 58.621 38.462 0.00 0.00 46.36 1.78
262 307 7.540474 AGATATTCCACTACGGACAACATAT 57.460 36.000 0.00 0.00 46.36 1.78
263 308 6.971726 AGATATTCCACTACGGACAACATA 57.028 37.500 0.00 0.00 46.36 2.29
264 309 5.871396 AGATATTCCACTACGGACAACAT 57.129 39.130 0.00 0.00 46.36 2.71
265 310 6.778834 TTAGATATTCCACTACGGACAACA 57.221 37.500 0.00 0.00 46.36 3.33
266 311 8.483307 TTTTTAGATATTCCACTACGGACAAC 57.517 34.615 0.00 0.00 46.36 3.32
267 312 8.533657 TCTTTTTAGATATTCCACTACGGACAA 58.466 33.333 0.00 0.00 46.36 3.18
268 313 7.977853 GTCTTTTTAGATATTCCACTACGGACA 59.022 37.037 0.00 0.00 46.36 4.02
269 314 8.196103 AGTCTTTTTAGATATTCCACTACGGAC 58.804 37.037 0.00 0.00 46.36 4.79
270 315 8.302515 AGTCTTTTTAGATATTCCACTACGGA 57.697 34.615 0.00 0.00 44.40 4.69
271 316 8.943909 AAGTCTTTTTAGATATTCCACTACGG 57.056 34.615 0.00 0.00 0.00 4.02
352 397 7.141363 ACAAAGCAAAATGAGTGAATCTACAC 58.859 34.615 0.00 0.00 40.60 2.90
353 398 7.275888 ACAAAGCAAAATGAGTGAATCTACA 57.724 32.000 0.00 0.00 0.00 2.74
354 399 9.282247 CATACAAAGCAAAATGAGTGAATCTAC 57.718 33.333 0.00 0.00 0.00 2.59
355 400 9.013229 ACATACAAAGCAAAATGAGTGAATCTA 57.987 29.630 0.00 0.00 0.00 1.98
356 401 7.889469 ACATACAAAGCAAAATGAGTGAATCT 58.111 30.769 0.00 0.00 0.00 2.40
357 402 9.065871 GTACATACAAAGCAAAATGAGTGAATC 57.934 33.333 0.00 0.00 0.00 2.52
358 403 8.796475 AGTACATACAAAGCAAAATGAGTGAAT 58.204 29.630 0.00 0.00 0.00 2.57
359 404 8.165239 AGTACATACAAAGCAAAATGAGTGAA 57.835 30.769 0.00 0.00 0.00 3.18
360 405 7.744087 AGTACATACAAAGCAAAATGAGTGA 57.256 32.000 0.00 0.00 0.00 3.41
361 406 7.538678 GGAAGTACATACAAAGCAAAATGAGTG 59.461 37.037 0.00 0.00 0.00 3.51
362 407 7.448469 AGGAAGTACATACAAAGCAAAATGAGT 59.552 33.333 0.00 0.00 0.00 3.41
363 408 7.820648 AGGAAGTACATACAAAGCAAAATGAG 58.179 34.615 0.00 0.00 0.00 2.90
364 409 7.094377 GGAGGAAGTACATACAAAGCAAAATGA 60.094 37.037 0.00 0.00 0.00 2.57
365 410 7.029563 GGAGGAAGTACATACAAAGCAAAATG 58.970 38.462 0.00 0.00 0.00 2.32
366 411 6.128007 CGGAGGAAGTACATACAAAGCAAAAT 60.128 38.462 0.00 0.00 0.00 1.82
367 412 5.180492 CGGAGGAAGTACATACAAAGCAAAA 59.820 40.000 0.00 0.00 0.00 2.44
368 413 4.693566 CGGAGGAAGTACATACAAAGCAAA 59.306 41.667 0.00 0.00 0.00 3.68
369 414 4.250464 CGGAGGAAGTACATACAAAGCAA 58.750 43.478 0.00 0.00 0.00 3.91
370 415 3.259876 ACGGAGGAAGTACATACAAAGCA 59.740 43.478 0.00 0.00 0.00 3.91
371 416 3.858247 ACGGAGGAAGTACATACAAAGC 58.142 45.455 0.00 0.00 0.00 3.51
372 417 6.164176 AGAAACGGAGGAAGTACATACAAAG 58.836 40.000 0.00 0.00 0.00 2.77
373 418 6.105397 AGAAACGGAGGAAGTACATACAAA 57.895 37.500 0.00 0.00 0.00 2.83
374 419 5.733620 AGAAACGGAGGAAGTACATACAA 57.266 39.130 0.00 0.00 0.00 2.41
375 420 6.839124 TTAGAAACGGAGGAAGTACATACA 57.161 37.500 0.00 0.00 0.00 2.29
376 421 9.978044 ATATTTAGAAACGGAGGAAGTACATAC 57.022 33.333 0.00 0.00 0.00 2.39
380 425 8.976471 GCTTATATTTAGAAACGGAGGAAGTAC 58.024 37.037 0.00 0.00 0.00 2.73
381 426 8.146412 GGCTTATATTTAGAAACGGAGGAAGTA 58.854 37.037 0.00 0.00 0.00 2.24
382 427 6.990939 GGCTTATATTTAGAAACGGAGGAAGT 59.009 38.462 0.00 0.00 0.00 3.01
383 428 7.217906 AGGCTTATATTTAGAAACGGAGGAAG 58.782 38.462 0.00 0.00 0.00 3.46
384 429 7.133133 AGGCTTATATTTAGAAACGGAGGAA 57.867 36.000 0.00 0.00 0.00 3.36
385 430 6.742559 AGGCTTATATTTAGAAACGGAGGA 57.257 37.500 0.00 0.00 0.00 3.71
386 431 7.803279 AAAGGCTTATATTTAGAAACGGAGG 57.197 36.000 0.00 0.00 0.00 4.30
401 446 9.657419 CCATTTGAAATGTCTAAAAAGGCTTAT 57.343 29.630 15.93 0.00 0.00 1.73
402 447 8.865090 TCCATTTGAAATGTCTAAAAAGGCTTA 58.135 29.630 15.93 0.00 0.00 3.09
403 448 7.657354 GTCCATTTGAAATGTCTAAAAAGGCTT 59.343 33.333 15.93 0.00 0.00 4.35
404 449 7.015584 AGTCCATTTGAAATGTCTAAAAAGGCT 59.984 33.333 15.93 3.03 0.00 4.58
405 450 7.154656 AGTCCATTTGAAATGTCTAAAAAGGC 58.845 34.615 15.93 0.85 0.00 4.35
406 451 9.626045 GTAGTCCATTTGAAATGTCTAAAAAGG 57.374 33.333 15.93 0.00 0.00 3.11
409 454 9.959749 GTTGTAGTCCATTTGAAATGTCTAAAA 57.040 29.630 15.93 14.59 0.00 1.52
410 455 9.126151 TGTTGTAGTCCATTTGAAATGTCTAAA 57.874 29.630 15.93 10.39 0.00 1.85
411 456 8.684386 TGTTGTAGTCCATTTGAAATGTCTAA 57.316 30.769 15.93 4.89 0.00 2.10
412 457 8.862325 ATGTTGTAGTCCATTTGAAATGTCTA 57.138 30.769 15.93 13.97 0.00 2.59
413 458 7.765695 ATGTTGTAGTCCATTTGAAATGTCT 57.234 32.000 15.93 14.81 0.00 3.41
414 459 7.692291 CGTATGTTGTAGTCCATTTGAAATGTC 59.308 37.037 15.93 9.10 0.00 3.06
415 460 7.361713 CCGTATGTTGTAGTCCATTTGAAATGT 60.362 37.037 15.93 1.43 0.00 2.71
416 461 6.966632 CCGTATGTTGTAGTCCATTTGAAATG 59.033 38.462 10.84 10.84 0.00 2.32
417 462 6.882140 TCCGTATGTTGTAGTCCATTTGAAAT 59.118 34.615 0.00 0.00 0.00 2.17
418 463 6.231951 TCCGTATGTTGTAGTCCATTTGAAA 58.768 36.000 0.00 0.00 0.00 2.69
419 464 5.795972 TCCGTATGTTGTAGTCCATTTGAA 58.204 37.500 0.00 0.00 0.00 2.69
420 465 5.408880 TCCGTATGTTGTAGTCCATTTGA 57.591 39.130 0.00 0.00 0.00 2.69
421 466 5.584649 ACATCCGTATGTTGTAGTCCATTTG 59.415 40.000 0.00 0.00 44.07 2.32
422 467 5.741011 ACATCCGTATGTTGTAGTCCATTT 58.259 37.500 0.00 0.00 44.07 2.32
423 468 5.353394 ACATCCGTATGTTGTAGTCCATT 57.647 39.130 0.00 0.00 44.07 3.16
424 469 6.455647 CATACATCCGTATGTTGTAGTCCAT 58.544 40.000 0.00 0.00 46.70 3.41
425 470 5.838529 CATACATCCGTATGTTGTAGTCCA 58.161 41.667 0.00 0.00 46.70 4.02
486 531 3.827876 TCCCAACAAGTGACTACATACGA 59.172 43.478 0.00 0.00 0.00 3.43
487 532 4.182693 TCCCAACAAGTGACTACATACG 57.817 45.455 0.00 0.00 0.00 3.06
488 533 5.978814 AGATCCCAACAAGTGACTACATAC 58.021 41.667 0.00 0.00 0.00 2.39
492 537 4.810191 AGAGATCCCAACAAGTGACTAC 57.190 45.455 0.00 0.00 0.00 2.73
493 538 6.928348 TTTAGAGATCCCAACAAGTGACTA 57.072 37.500 0.00 0.00 0.00 2.59
494 539 5.825593 TTTAGAGATCCCAACAAGTGACT 57.174 39.130 0.00 0.00 0.00 3.41
495 540 6.710744 TCTTTTTAGAGATCCCAACAAGTGAC 59.289 38.462 0.00 0.00 0.00 3.67
496 541 6.710744 GTCTTTTTAGAGATCCCAACAAGTGA 59.289 38.462 0.00 0.00 0.00 3.41
497 542 6.712547 AGTCTTTTTAGAGATCCCAACAAGTG 59.287 38.462 0.00 0.00 0.00 3.16
498 543 6.842676 AGTCTTTTTAGAGATCCCAACAAGT 58.157 36.000 0.00 0.00 0.00 3.16
499 544 7.751768 AAGTCTTTTTAGAGATCCCAACAAG 57.248 36.000 0.00 0.00 0.00 3.16
511 556 9.169592 CCGTTCCCAAATATAAGTCTTTTTAGA 57.830 33.333 0.00 0.00 0.00 2.10
512 557 9.169592 TCCGTTCCCAAATATAAGTCTTTTTAG 57.830 33.333 0.00 0.00 0.00 1.85
513 558 9.169592 CTCCGTTCCCAAATATAAGTCTTTTTA 57.830 33.333 0.00 0.00 0.00 1.52
514 559 7.122204 CCTCCGTTCCCAAATATAAGTCTTTTT 59.878 37.037 0.00 0.00 0.00 1.94
515 560 6.602009 CCTCCGTTCCCAAATATAAGTCTTTT 59.398 38.462 0.00 0.00 0.00 2.27
516 561 6.120220 CCTCCGTTCCCAAATATAAGTCTTT 58.880 40.000 0.00 0.00 0.00 2.52
517 562 5.397559 CCCTCCGTTCCCAAATATAAGTCTT 60.398 44.000 0.00 0.00 0.00 3.01
518 563 4.102681 CCCTCCGTTCCCAAATATAAGTCT 59.897 45.833 0.00 0.00 0.00 3.24
519 564 4.102054 TCCCTCCGTTCCCAAATATAAGTC 59.898 45.833 0.00 0.00 0.00 3.01
520 565 4.042174 TCCCTCCGTTCCCAAATATAAGT 58.958 43.478 0.00 0.00 0.00 2.24
521 566 4.102681 ACTCCCTCCGTTCCCAAATATAAG 59.897 45.833 0.00 0.00 0.00 1.73
522 567 4.042174 ACTCCCTCCGTTCCCAAATATAA 58.958 43.478 0.00 0.00 0.00 0.98
523 568 3.660959 ACTCCCTCCGTTCCCAAATATA 58.339 45.455 0.00 0.00 0.00 0.86
524 569 2.488836 ACTCCCTCCGTTCCCAAATAT 58.511 47.619 0.00 0.00 0.00 1.28
525 570 1.961133 ACTCCCTCCGTTCCCAAATA 58.039 50.000 0.00 0.00 0.00 1.40
526 571 1.838077 CTACTCCCTCCGTTCCCAAAT 59.162 52.381 0.00 0.00 0.00 2.32
527 572 1.272807 CTACTCCCTCCGTTCCCAAA 58.727 55.000 0.00 0.00 0.00 3.28
528 573 0.115745 ACTACTCCCTCCGTTCCCAA 59.884 55.000 0.00 0.00 0.00 4.12
529 574 0.324091 GACTACTCCCTCCGTTCCCA 60.324 60.000 0.00 0.00 0.00 4.37
530 575 1.042003 GGACTACTCCCTCCGTTCCC 61.042 65.000 0.00 0.00 0.00 3.97
531 576 1.382692 CGGACTACTCCCTCCGTTCC 61.383 65.000 0.00 0.00 43.79 3.62
532 577 2.105124 CGGACTACTCCCTCCGTTC 58.895 63.158 0.00 0.00 43.79 3.95
533 578 4.333417 CGGACTACTCCCTCCGTT 57.667 61.111 0.00 0.00 43.79 4.44
536 581 2.941480 TCAATACGGACTACTCCCTCC 58.059 52.381 0.00 0.00 31.93 4.30
537 582 4.996788 TTTCAATACGGACTACTCCCTC 57.003 45.455 0.00 0.00 31.93 4.30
538 583 7.011382 AGATATTTCAATACGGACTACTCCCT 58.989 38.462 0.00 0.00 31.93 4.20
539 584 7.039923 TCAGATATTTCAATACGGACTACTCCC 60.040 40.741 0.00 0.00 31.93 4.30
540 585 7.883217 TCAGATATTTCAATACGGACTACTCC 58.117 38.462 0.00 0.00 0.00 3.85
541 586 9.745880 TTTCAGATATTTCAATACGGACTACTC 57.254 33.333 0.00 0.00 0.00 2.59
542 587 9.751542 CTTTCAGATATTTCAATACGGACTACT 57.248 33.333 0.00 0.00 0.00 2.57
573 619 5.800653 AGTACTCCCCCTGTTCCTAAATAT 58.199 41.667 0.00 0.00 0.00 1.28
585 631 1.008403 TGCTGAGTAGTACTCCCCCT 58.992 55.000 24.32 0.00 44.44 4.79
587 633 5.810080 ATATTTGCTGAGTAGTACTCCCC 57.190 43.478 24.32 16.23 44.44 4.81
611 657 3.522568 CGAATGCGGTATCGTCGG 58.477 61.111 0.00 0.00 38.89 4.79
621 667 7.646922 AGAAATACTTAACCTAGTACGAATGCG 59.353 37.037 0.00 0.00 44.79 4.73
638 684 5.880901 ACCACCATGAAGTCAGAAATACTT 58.119 37.500 0.00 0.00 39.84 2.24
644 690 4.277476 ACAAAACCACCATGAAGTCAGAA 58.723 39.130 0.00 0.00 0.00 3.02
724 770 7.315890 CAGAAAAATCAATCCTACTGTTTCCC 58.684 38.462 0.00 0.00 0.00 3.97
726 772 7.039714 ACCCAGAAAAATCAATCCTACTGTTTC 60.040 37.037 0.00 0.00 0.00 2.78
750 796 0.321919 TGCTTGCTGTCCAGATGACC 60.322 55.000 0.00 0.00 43.78 4.02
751 797 1.400846 CATGCTTGCTGTCCAGATGAC 59.599 52.381 0.00 0.00 44.72 3.06
796 842 1.596934 GTCCAATCCTCTCACGGCA 59.403 57.895 0.00 0.00 0.00 5.69
882 931 7.397221 ACAGACAGATTTCAGGATAACATGAA 58.603 34.615 0.00 0.00 43.44 2.57
932 982 3.294079 GCAACAAACAGCCTGCAAT 57.706 47.368 0.00 0.00 34.87 3.56
974 1034 1.478510 CCAATGTGCCTCTCGTCTACT 59.521 52.381 0.00 0.00 0.00 2.57
1015 1075 4.312443 GTTTGTGTTCTGATCCCTCGTAA 58.688 43.478 0.00 0.00 0.00 3.18
1145 1205 4.832266 TGGTAGCCTGTTGAATTGATTTGT 59.168 37.500 0.00 0.00 0.00 2.83
1423 1483 4.417437 TCTGGGTAGAAGTACTGCTTTCT 58.583 43.478 9.19 4.27 37.59 2.52
1608 1668 3.958147 GGAAAACCTGAGAAAAACTCCCA 59.042 43.478 0.00 0.00 44.34 4.37
1649 1709 0.967380 TTTCCGGACGGAGGGAGTAC 60.967 60.000 13.64 0.00 46.06 2.73
1650 1710 0.032813 ATTTCCGGACGGAGGGAGTA 60.033 55.000 13.64 0.00 46.06 2.59
1651 1711 0.032813 TATTTCCGGACGGAGGGAGT 60.033 55.000 13.64 0.00 46.06 3.85
1652 1712 0.388294 GTATTTCCGGACGGAGGGAG 59.612 60.000 13.64 0.00 46.06 4.30
1653 1713 0.032813 AGTATTTCCGGACGGAGGGA 60.033 55.000 13.64 4.95 46.06 4.20
1654 1714 0.388294 GAGTATTTCCGGACGGAGGG 59.612 60.000 13.64 0.00 46.06 4.30
1655 1715 0.030369 CGAGTATTTCCGGACGGAGG 59.970 60.000 13.64 0.00 46.06 4.30
1656 1716 0.737219 ACGAGTATTTCCGGACGGAG 59.263 55.000 13.64 3.15 46.06 4.63
1657 1717 0.734889 GACGAGTATTTCCGGACGGA 59.265 55.000 1.83 9.76 43.52 4.69
1658 1718 0.590732 CGACGAGTATTTCCGGACGG 60.591 60.000 1.83 3.96 0.00 4.79
1659 1719 0.590732 CCGACGAGTATTTCCGGACG 60.591 60.000 1.83 5.89 42.49 4.79
1660 1720 0.734889 TCCGACGAGTATTTCCGGAC 59.265 55.000 1.83 0.00 43.47 4.79
1661 1721 1.019673 CTCCGACGAGTATTTCCGGA 58.980 55.000 0.00 0.00 45.74 5.14
1662 1722 1.019673 TCTCCGACGAGTATTTCCGG 58.980 55.000 0.00 0.00 41.36 5.14
1663 1723 2.838386 TTCTCCGACGAGTATTTCCG 57.162 50.000 0.00 0.00 37.40 4.30
1664 1724 3.245519 GCATTTCTCCGACGAGTATTTCC 59.754 47.826 0.00 0.00 37.40 3.13
1665 1725 3.863424 TGCATTTCTCCGACGAGTATTTC 59.137 43.478 0.00 0.00 37.40 2.17
1666 1726 3.857052 TGCATTTCTCCGACGAGTATTT 58.143 40.909 0.00 0.00 37.40 1.40
1667 1727 3.520290 TGCATTTCTCCGACGAGTATT 57.480 42.857 0.00 0.00 37.40 1.89
1668 1728 3.735237 ATGCATTTCTCCGACGAGTAT 57.265 42.857 0.00 0.00 37.40 2.12
1669 1729 4.642445 TTATGCATTTCTCCGACGAGTA 57.358 40.909 3.54 0.00 37.40 2.59
1670 1730 3.520290 TTATGCATTTCTCCGACGAGT 57.480 42.857 3.54 0.00 37.40 4.18
1671 1731 4.857871 TTTTATGCATTTCTCCGACGAG 57.142 40.909 3.54 0.00 37.48 4.18
1672 1732 5.448496 CCATTTTTATGCATTTCTCCGACGA 60.448 40.000 3.54 0.00 0.00 4.20
1673 1733 4.734854 CCATTTTTATGCATTTCTCCGACG 59.265 41.667 3.54 0.00 0.00 5.12
1674 1734 5.890334 TCCATTTTTATGCATTTCTCCGAC 58.110 37.500 3.54 0.00 0.00 4.79
1675 1735 6.096705 ACATCCATTTTTATGCATTTCTCCGA 59.903 34.615 3.54 0.00 0.00 4.55
1676 1736 6.275335 ACATCCATTTTTATGCATTTCTCCG 58.725 36.000 3.54 0.00 0.00 4.63
1677 1737 9.415544 GATACATCCATTTTTATGCATTTCTCC 57.584 33.333 3.54 0.00 0.00 3.71
1712 1772 9.915629 GAGAAATGGATGTATCTAGACGTATTT 57.084 33.333 0.00 0.00 0.00 1.40
1713 1773 8.524487 GGAGAAATGGATGTATCTAGACGTATT 58.476 37.037 0.00 0.00 0.00 1.89
1714 1774 7.148222 CGGAGAAATGGATGTATCTAGACGTAT 60.148 40.741 0.00 0.00 0.00 3.06
1715 1775 6.148976 CGGAGAAATGGATGTATCTAGACGTA 59.851 42.308 0.00 0.00 0.00 3.57
1716 1776 5.048643 CGGAGAAATGGATGTATCTAGACGT 60.049 44.000 0.00 0.00 0.00 4.34
1717 1777 5.181433 TCGGAGAAATGGATGTATCTAGACG 59.819 44.000 0.00 0.00 0.00 4.18
1718 1778 6.016192 TGTCGGAGAAATGGATGTATCTAGAC 60.016 42.308 0.00 0.00 39.69 2.59
1719 1779 6.068670 TGTCGGAGAAATGGATGTATCTAGA 58.931 40.000 0.00 0.00 39.69 2.43
1720 1780 6.332735 TGTCGGAGAAATGGATGTATCTAG 57.667 41.667 0.00 0.00 39.69 2.43
1721 1781 6.323996 ACTTGTCGGAGAAATGGATGTATCTA 59.676 38.462 0.00 0.00 39.69 1.98
1722 1782 5.129485 ACTTGTCGGAGAAATGGATGTATCT 59.871 40.000 0.00 0.00 39.69 1.98
1723 1783 5.360591 ACTTGTCGGAGAAATGGATGTATC 58.639 41.667 0.00 0.00 39.69 2.24
1724 1784 5.359194 ACTTGTCGGAGAAATGGATGTAT 57.641 39.130 0.00 0.00 39.69 2.29
1725 1785 4.819105 ACTTGTCGGAGAAATGGATGTA 57.181 40.909 0.00 0.00 39.69 2.29
1726 1786 3.703001 ACTTGTCGGAGAAATGGATGT 57.297 42.857 0.00 0.00 39.69 3.06
1727 1787 6.683974 AAATACTTGTCGGAGAAATGGATG 57.316 37.500 0.00 0.00 39.69 3.51
1728 1788 6.479001 CGTAAATACTTGTCGGAGAAATGGAT 59.521 38.462 0.00 0.00 39.69 3.41
1729 1789 5.808540 CGTAAATACTTGTCGGAGAAATGGA 59.191 40.000 0.00 0.00 39.69 3.41
1730 1790 5.006358 CCGTAAATACTTGTCGGAGAAATGG 59.994 44.000 0.00 0.00 43.22 3.16
1731 1791 5.808540 TCCGTAAATACTTGTCGGAGAAATG 59.191 40.000 0.00 0.00 44.04 2.32
1732 1792 5.969423 TCCGTAAATACTTGTCGGAGAAAT 58.031 37.500 0.00 0.00 44.04 2.17
1733 1793 5.389859 TCCGTAAATACTTGTCGGAGAAA 57.610 39.130 0.00 0.00 44.04 2.52
1737 1797 2.159393 CCGTCCGTAAATACTTGTCGGA 60.159 50.000 0.00 0.00 46.14 4.55
1738 1798 2.159393 TCCGTCCGTAAATACTTGTCGG 60.159 50.000 0.00 0.00 42.12 4.79
1739 1799 3.103738 CTCCGTCCGTAAATACTTGTCG 58.896 50.000 0.00 0.00 0.00 4.35
1740 1800 3.442100 CCTCCGTCCGTAAATACTTGTC 58.558 50.000 0.00 0.00 0.00 3.18
1741 1801 2.167075 CCCTCCGTCCGTAAATACTTGT 59.833 50.000 0.00 0.00 0.00 3.16
1742 1802 2.428171 TCCCTCCGTCCGTAAATACTTG 59.572 50.000 0.00 0.00 0.00 3.16
1743 1803 2.692041 CTCCCTCCGTCCGTAAATACTT 59.308 50.000 0.00 0.00 0.00 2.24
1744 1804 2.305009 CTCCCTCCGTCCGTAAATACT 58.695 52.381 0.00 0.00 0.00 2.12
1745 1805 2.027385 ACTCCCTCCGTCCGTAAATAC 58.973 52.381 0.00 0.00 0.00 1.89
1746 1806 2.442236 ACTCCCTCCGTCCGTAAATA 57.558 50.000 0.00 0.00 0.00 1.40
1747 1807 2.027385 GTACTCCCTCCGTCCGTAAAT 58.973 52.381 0.00 0.00 0.00 1.40
1748 1808 1.463674 GTACTCCCTCCGTCCGTAAA 58.536 55.000 0.00 0.00 0.00 2.01
1749 1809 0.394352 GGTACTCCCTCCGTCCGTAA 60.394 60.000 0.00 0.00 0.00 3.18
1750 1810 1.224592 GGTACTCCCTCCGTCCGTA 59.775 63.158 0.00 0.00 0.00 4.02
1751 1811 2.044551 GGTACTCCCTCCGTCCGT 60.045 66.667 0.00 0.00 0.00 4.69
1752 1812 2.119655 CAGGTACTCCCTCCGTCCG 61.120 68.421 0.00 0.00 43.86 4.79
1753 1813 0.614134 AACAGGTACTCCCTCCGTCC 60.614 60.000 0.00 0.00 43.86 4.79
1754 1814 1.264295 AAACAGGTACTCCCTCCGTC 58.736 55.000 0.00 0.00 43.86 4.79
1755 1815 1.622312 GAAAACAGGTACTCCCTCCGT 59.378 52.381 0.00 0.00 43.86 4.69
1756 1816 1.900486 AGAAAACAGGTACTCCCTCCG 59.100 52.381 0.00 0.00 43.86 4.63
1757 1817 2.638363 ACAGAAAACAGGTACTCCCTCC 59.362 50.000 0.00 0.00 43.86 4.30
1758 1818 4.353383 AACAGAAAACAGGTACTCCCTC 57.647 45.455 0.00 0.00 43.86 4.30
1760 1820 8.803397 AAATATAACAGAAAACAGGTACTCCC 57.197 34.615 0.00 0.00 34.60 4.30
1805 1879 1.073444 AGGGCCATATCACAGAGCATG 59.927 52.381 6.18 0.00 0.00 4.06
1889 1965 3.375299 CGACTCCCCATCTTTAGCTTTTG 59.625 47.826 0.00 0.00 0.00 2.44
1893 1969 1.482593 CACGACTCCCCATCTTTAGCT 59.517 52.381 0.00 0.00 0.00 3.32
1904 1980 5.727434 TCTTAAGTAAATTCCACGACTCCC 58.273 41.667 1.63 0.00 0.00 4.30
2141 2331 6.707440 TGAAAGGCAAAGATCTAAACACAA 57.293 33.333 0.00 0.00 0.00 3.33
2204 2403 5.699097 TTTTACAGATTTCCCAAACCTCG 57.301 39.130 0.00 0.00 0.00 4.63
2312 2514 0.032813 ATTTCCGGACGGAGGGAGTA 60.033 55.000 13.64 0.00 46.06 2.59
2314 2516 0.388294 GTATTTCCGGACGGAGGGAG 59.612 60.000 13.64 0.00 46.06 4.30
2315 2517 0.032813 AGTATTTCCGGACGGAGGGA 60.033 55.000 13.64 4.95 46.06 4.20
2316 2518 0.828677 AAGTATTTCCGGACGGAGGG 59.171 55.000 13.64 0.00 46.06 4.30
2317 2519 1.206371 ACAAGTATTTCCGGACGGAGG 59.794 52.381 13.64 0.00 46.06 4.30
2318 2520 2.094390 TGACAAGTATTTCCGGACGGAG 60.094 50.000 13.64 3.15 46.06 4.63
2319 2521 1.894466 TGACAAGTATTTCCGGACGGA 59.106 47.619 1.83 9.76 43.52 4.69
2320 2522 2.094390 TCTGACAAGTATTTCCGGACGG 60.094 50.000 1.83 3.96 0.00 4.79
2321 2523 3.119602 TCTCTGACAAGTATTTCCGGACG 60.120 47.826 1.83 0.00 0.00 4.79
2322 2524 4.451629 TCTCTGACAAGTATTTCCGGAC 57.548 45.455 1.83 0.00 0.00 4.79
2323 2525 5.477607 TTTCTCTGACAAGTATTTCCGGA 57.522 39.130 0.00 0.00 0.00 5.14
2324 2526 5.447818 GCATTTCTCTGACAAGTATTTCCGG 60.448 44.000 0.00 0.00 0.00 5.14
2325 2527 5.122239 TGCATTTCTCTGACAAGTATTTCCG 59.878 40.000 0.00 0.00 0.00 4.30
2326 2528 6.500684 TGCATTTCTCTGACAAGTATTTCC 57.499 37.500 0.00 0.00 0.00 3.13
2331 2533 9.844790 CATTTTTATGCATTTCTCTGACAAGTA 57.155 29.630 3.54 0.00 0.00 2.24
2332 2534 7.816031 CCATTTTTATGCATTTCTCTGACAAGT 59.184 33.333 3.54 0.00 0.00 3.16
2333 2535 8.030692 TCCATTTTTATGCATTTCTCTGACAAG 58.969 33.333 3.54 0.00 0.00 3.16
2334 2536 7.894708 TCCATTTTTATGCATTTCTCTGACAA 58.105 30.769 3.54 0.00 0.00 3.18
2335 2537 7.465353 TCCATTTTTATGCATTTCTCTGACA 57.535 32.000 3.54 0.00 0.00 3.58
2336 2538 7.977853 ACATCCATTTTTATGCATTTCTCTGAC 59.022 33.333 3.54 0.00 0.00 3.51
2337 2539 8.070034 ACATCCATTTTTATGCATTTCTCTGA 57.930 30.769 3.54 0.00 0.00 3.27
2338 2540 9.976511 ATACATCCATTTTTATGCATTTCTCTG 57.023 29.630 3.54 0.00 0.00 3.35
2346 2548 9.851686 AGTTCTAGATACATCCATTTTTATGCA 57.148 29.630 0.00 0.00 0.00 3.96
2373 2575 8.871125 AGGAATGGATGTATCTAGACGTATTTT 58.129 33.333 0.00 0.00 0.00 1.82
2374 2576 8.423906 AGGAATGGATGTATCTAGACGTATTT 57.576 34.615 0.00 0.00 0.00 1.40
2375 2577 7.891183 AGAGGAATGGATGTATCTAGACGTATT 59.109 37.037 0.00 0.00 0.00 1.89
2376 2578 7.338196 CAGAGGAATGGATGTATCTAGACGTAT 59.662 40.741 0.00 0.00 0.00 3.06
2377 2579 6.655425 CAGAGGAATGGATGTATCTAGACGTA 59.345 42.308 0.00 0.00 0.00 3.57
2378 2580 5.475220 CAGAGGAATGGATGTATCTAGACGT 59.525 44.000 0.00 0.00 0.00 4.34
2379 2581 5.707764 TCAGAGGAATGGATGTATCTAGACG 59.292 44.000 0.00 0.00 0.00 4.18
2380 2582 6.491745 TGTCAGAGGAATGGATGTATCTAGAC 59.508 42.308 0.00 0.00 0.00 2.59
2381 2583 6.614657 TGTCAGAGGAATGGATGTATCTAGA 58.385 40.000 0.00 0.00 0.00 2.43
2382 2584 6.907853 TGTCAGAGGAATGGATGTATCTAG 57.092 41.667 0.00 0.00 0.00 2.43
2383 2585 6.841229 ACTTGTCAGAGGAATGGATGTATCTA 59.159 38.462 0.00 0.00 0.00 1.98
2384 2586 5.664908 ACTTGTCAGAGGAATGGATGTATCT 59.335 40.000 0.00 0.00 0.00 1.98
2385 2587 5.923204 ACTTGTCAGAGGAATGGATGTATC 58.077 41.667 0.00 0.00 0.00 2.24
2386 2588 5.965033 ACTTGTCAGAGGAATGGATGTAT 57.035 39.130 0.00 0.00 0.00 2.29
2387 2589 7.437713 AATACTTGTCAGAGGAATGGATGTA 57.562 36.000 0.00 0.00 0.00 2.29
2388 2590 5.965033 ATACTTGTCAGAGGAATGGATGT 57.035 39.130 0.00 0.00 0.00 3.06
2389 2591 6.261826 GGAAATACTTGTCAGAGGAATGGATG 59.738 42.308 0.00 0.00 0.00 3.51
2390 2592 6.360618 GGAAATACTTGTCAGAGGAATGGAT 58.639 40.000 0.00 0.00 0.00 3.41
2391 2593 5.626809 CGGAAATACTTGTCAGAGGAATGGA 60.627 44.000 0.00 0.00 0.00 3.41
2392 2594 4.572389 CGGAAATACTTGTCAGAGGAATGG 59.428 45.833 0.00 0.00 0.00 3.16
2393 2595 4.572389 CCGGAAATACTTGTCAGAGGAATG 59.428 45.833 0.00 0.00 0.00 2.67
2394 2596 4.469945 TCCGGAAATACTTGTCAGAGGAAT 59.530 41.667 0.00 0.00 0.00 3.01
2395 2597 3.835978 TCCGGAAATACTTGTCAGAGGAA 59.164 43.478 0.00 0.00 0.00 3.36
2396 2598 3.194968 GTCCGGAAATACTTGTCAGAGGA 59.805 47.826 5.23 0.00 0.00 3.71
2397 2599 3.522553 GTCCGGAAATACTTGTCAGAGG 58.477 50.000 5.23 0.00 0.00 3.69
2398 2600 3.179830 CGTCCGGAAATACTTGTCAGAG 58.820 50.000 5.23 0.00 0.00 3.35
2399 2601 2.094390 CCGTCCGGAAATACTTGTCAGA 60.094 50.000 5.23 0.00 37.50 3.27
2400 2602 2.094390 TCCGTCCGGAAATACTTGTCAG 60.094 50.000 5.23 0.00 42.05 3.51
2401 2603 1.894466 TCCGTCCGGAAATACTTGTCA 59.106 47.619 5.23 0.00 42.05 3.58
2402 2604 2.537401 CTCCGTCCGGAAATACTTGTC 58.463 52.381 5.23 0.00 44.66 3.18
2403 2605 1.206371 CCTCCGTCCGGAAATACTTGT 59.794 52.381 5.23 0.00 44.66 3.16
2404 2606 1.472728 CCCTCCGTCCGGAAATACTTG 60.473 57.143 5.23 0.00 44.66 3.16
2405 2607 0.828677 CCCTCCGTCCGGAAATACTT 59.171 55.000 5.23 0.00 44.66 2.24
2406 2608 0.032813 TCCCTCCGTCCGGAAATACT 60.033 55.000 5.23 0.00 44.66 2.12
2407 2609 0.388294 CTCCCTCCGTCCGGAAATAC 59.612 60.000 5.23 0.00 44.66 1.89
2408 2610 0.032813 ACTCCCTCCGTCCGGAAATA 60.033 55.000 5.23 0.00 44.66 1.40
2409 2611 0.032813 TACTCCCTCCGTCCGGAAAT 60.033 55.000 5.23 0.00 44.66 2.17
2410 2612 0.682209 CTACTCCCTCCGTCCGGAAA 60.682 60.000 5.23 0.00 44.66 3.13
2411 2613 1.077212 CTACTCCCTCCGTCCGGAA 60.077 63.158 5.23 0.00 44.66 4.30
2412 2614 1.351080 ATCTACTCCCTCCGTCCGGA 61.351 60.000 0.00 0.00 42.90 5.14
2413 2615 0.399454 TATCTACTCCCTCCGTCCGG 59.601 60.000 0.00 0.00 0.00 5.14
2414 2616 1.347050 TCTATCTACTCCCTCCGTCCG 59.653 57.143 0.00 0.00 0.00 4.79
2415 2617 2.638855 TCTCTATCTACTCCCTCCGTCC 59.361 54.545 0.00 0.00 0.00 4.79
2416 2618 3.579586 TCTCTCTATCTACTCCCTCCGTC 59.420 52.174 0.00 0.00 0.00 4.79
2417 2619 3.589641 TCTCTCTATCTACTCCCTCCGT 58.410 50.000 0.00 0.00 0.00 4.69
2418 2620 4.285003 TCTTCTCTCTATCTACTCCCTCCG 59.715 50.000 0.00 0.00 0.00 4.63
2419 2621 5.836024 TCTTCTCTCTATCTACTCCCTCC 57.164 47.826 0.00 0.00 0.00 4.30
2420 2622 6.838382 ACTTCTTCTCTCTATCTACTCCCTC 58.162 44.000 0.00 0.00 0.00 4.30
2421 2623 6.841781 ACTTCTTCTCTCTATCTACTCCCT 57.158 41.667 0.00 0.00 0.00 4.20
2473 2675 6.986231 CAGTACAATGAGCCAGTACATGATTA 59.014 38.462 0.00 0.00 40.32 1.75
2513 2880 7.965107 CAGAATAGCAACCACTTTAATGACTTC 59.035 37.037 0.00 0.00 0.00 3.01
2668 3036 1.672320 CATGTTGCCATTGCCCACA 59.328 52.632 0.00 0.00 35.01 4.17
2731 3099 4.970662 ACCGAATTCTGATTGTCCAATG 57.029 40.909 3.66 0.00 0.00 2.82
2826 3194 5.939296 TCAGATCATAACACTGATGCAAACA 59.061 36.000 0.00 0.00 36.01 2.83
2827 3195 6.426980 TCAGATCATAACACTGATGCAAAC 57.573 37.500 0.00 0.00 36.01 2.93
2857 3225 4.081365 TGCTCCGGACATAAGTGTATTGAA 60.081 41.667 0.00 0.00 39.09 2.69
3031 3593 7.591421 TGAGATATTTCATGCATTCACCAAT 57.409 32.000 0.00 0.00 0.00 3.16
3064 3627 9.720769 CTTTTCCTATACAAAGAAGTGAACCTA 57.279 33.333 0.00 0.00 32.56 3.08
3197 3782 4.404394 AGCATGCATGAAGGATTTTCATCA 59.596 37.500 30.64 3.07 37.06 3.07
3229 3814 0.363512 CGTGCTTGATCGAACAGACG 59.636 55.000 8.71 8.71 0.00 4.18
3246 3831 1.946768 AGTGTTGCACAATACAAGCGT 59.053 42.857 12.00 0.00 36.74 5.07
3264 3849 4.018141 TCATCAAGGATGGATTCAACCAGT 60.018 41.667 2.68 0.00 43.49 4.00
3269 3854 5.190330 TCAGACTCATCAAGGATGGATTCAA 59.810 40.000 6.39 0.00 40.15 2.69
3279 3864 7.337689 TGTTTCCATATTTCAGACTCATCAAGG 59.662 37.037 0.00 0.00 0.00 3.61
3384 3969 2.971095 AAGCCTCAGCAACTGCAGCA 62.971 55.000 15.27 0.00 45.16 4.41
3407 3992 1.885887 TGCAAGAAAACAGGGGATTCG 59.114 47.619 0.00 0.00 0.00 3.34
3410 3995 4.162651 AGAAATGCAAGAAAACAGGGGAT 58.837 39.130 0.00 0.00 0.00 3.85
3492 4077 1.999648 ACACAACATGTCCAAGGCAT 58.000 45.000 0.00 0.00 36.54 4.40
3687 4531 8.962679 AGTTATCGCCTTTTAAAATAATGGTCA 58.037 29.630 0.09 0.00 0.00 4.02
4109 5025 7.513505 CGGCATTGAATTACGAATTTCATCAAC 60.514 37.037 0.00 0.00 0.00 3.18
4535 5610 0.454196 AAAGGCGTGACACACAAACC 59.546 50.000 6.37 0.00 33.40 3.27
4616 5704 1.596603 TGGCCATCATAATCAGTGCG 58.403 50.000 0.00 0.00 0.00 5.34
4669 5757 7.934855 AAACTATGCAAATCTTCAGACTGAT 57.065 32.000 5.87 0.00 0.00 2.90
4720 5992 7.865530 TCTTTATCATAGCCACCCAACTATA 57.134 36.000 0.00 0.00 0.00 1.31
4784 6072 1.504275 AATTCCCCAGAGGCAGCAGT 61.504 55.000 0.00 0.00 34.51 4.40
4890 6181 7.430992 GGTACTAAAACCTAACAAGACCAAG 57.569 40.000 0.00 0.00 36.53 3.61
4956 6249 3.251729 TGAGCTCAACAAGAATCTGCAAC 59.748 43.478 15.67 0.00 0.00 4.17
4998 6299 4.399618 TCTTTCTCCTCTATCACCGACTTG 59.600 45.833 0.00 0.00 0.00 3.16
5186 6822 6.605194 TGAAATCTCATCTGCTACAGTAGACT 59.395 38.462 12.15 0.00 39.51 3.24
5187 6823 6.800543 TGAAATCTCATCTGCTACAGTAGAC 58.199 40.000 12.15 3.65 39.51 2.59
5406 7042 0.393537 GGGGAACACAGCTCCAGATG 60.394 60.000 0.00 0.00 37.48 2.90
5656 7324 5.751243 AGTGTCTTTACAAAAGAATGCGT 57.249 34.783 3.77 0.00 37.36 5.24
5732 7407 2.158871 TCCAAGTAAGTGTCACCGCTTT 60.159 45.455 0.00 0.00 41.52 3.51
5817 7492 7.798596 ATCCTTCATTGTATCATGTGAACTC 57.201 36.000 0.00 0.00 0.00 3.01
5867 7542 1.003118 TGTACAACTGGCCACTCCATC 59.997 52.381 0.00 0.00 45.50 3.51
5878 7558 5.625251 GCAACTGATTCATCTGTACAACTG 58.375 41.667 0.00 0.00 37.90 3.16
5879 7559 4.389992 CGCAACTGATTCATCTGTACAACT 59.610 41.667 0.00 0.00 37.90 3.16
5935 7615 2.096335 CAGCTGCGTAAGATCAAATGCA 59.904 45.455 0.00 12.13 43.02 3.96
5978 7658 5.006068 CACATTCAGGATCGTAACTGATGTG 59.994 44.000 19.42 19.42 42.73 3.21
6018 7698 7.787623 ACTCAAGGGCTTAACTTAGTAGTAA 57.212 36.000 0.00 0.00 33.17 2.24
6189 7870 0.238289 CGAACATTTGCACGCTCCTT 59.762 50.000 0.00 0.00 0.00 3.36
6210 7891 3.910627 AGGTCCTAGAATGTCCAAACACT 59.089 43.478 0.00 0.00 38.48 3.55
6244 7925 7.909485 AGAGTACTATTAGGATCCGGAAAAA 57.091 36.000 9.01 0.30 0.00 1.94
6245 7926 7.909485 AAGAGTACTATTAGGATCCGGAAAA 57.091 36.000 9.01 0.71 0.00 2.29
6246 7927 9.597681 AATAAGAGTACTATTAGGATCCGGAAA 57.402 33.333 9.01 0.00 0.00 3.13
6249 7930 8.577048 TGAATAAGAGTACTATTAGGATCCGG 57.423 38.462 14.76 0.00 0.00 5.14
6455 8139 5.453567 AGTTCAAAAATAAGGAGTGTGGC 57.546 39.130 0.00 0.00 0.00 5.01
6456 8140 7.745620 AGTAGTTCAAAAATAAGGAGTGTGG 57.254 36.000 0.00 0.00 0.00 4.17


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.