Multiple sequence alignment - TraesCS2B01G276700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G276700 chr2B 100.000 3014 0 0 1 3014 382505480 382502467 0.000000e+00 5566.0
1 TraesCS2B01G276700 chr2B 94.949 99 3 2 2272 2369 383927938 383927841 1.450000e-33 154.0
2 TraesCS2B01G276700 chr2B 94.000 100 2 4 2272 2369 77856051 77856148 6.730000e-32 148.0
3 TraesCS2B01G276700 chr2B 93.939 99 5 1 2277 2374 544770212 544770310 6.730000e-32 148.0
4 TraesCS2B01G276700 chr2B 100.000 31 0 0 338 368 650416782 650416812 1.170000e-04 58.4
5 TraesCS2B01G276700 chr2D 96.457 1270 32 5 523 1790 314320062 314318804 0.000000e+00 2084.0
6 TraesCS2B01G276700 chr2D 97.840 648 13 1 2368 3014 314318220 314317573 0.000000e+00 1118.0
7 TraesCS2B01G276700 chr2D 94.567 497 22 4 1792 2286 314318712 314318219 0.000000e+00 763.0
8 TraesCS2B01G276700 chr2D 93.750 96 1 1 233 328 314326659 314326569 4.050000e-29 139.0
9 TraesCS2B01G276700 chr3B 95.000 1160 52 1 611 1764 729169375 729168216 0.000000e+00 1816.0
10 TraesCS2B01G276700 chr3B 87.375 499 39 10 1809 2286 729168134 729167639 4.390000e-153 551.0
11 TraesCS2B01G276700 chr2A 93.289 1192 49 12 598 1781 421248937 421250105 0.000000e+00 1729.0
12 TraesCS2B01G276700 chr2A 89.744 663 41 9 2368 3014 421250998 421251649 0.000000e+00 822.0
13 TraesCS2B01G276700 chr2A 96.845 412 12 1 1872 2283 421250582 421250992 0.000000e+00 688.0
14 TraesCS2B01G276700 chr2A 97.468 79 2 0 244 322 421244091 421244169 5.240000e-28 135.0
15 TraesCS2B01G276700 chr2A 91.358 81 7 0 1792 1872 421250194 421250274 8.830000e-21 111.0
16 TraesCS2B01G276700 chr2A 100.000 32 0 0 338 369 420138128 420138159 3.240000e-05 60.2
17 TraesCS2B01G276700 chr5D 84.264 197 26 4 1 195 321855228 321855421 1.430000e-43 187.0
18 TraesCS2B01G276700 chr5B 96.703 91 3 0 2284 2374 700361779 700361869 5.200000e-33 152.0
19 TraesCS2B01G276700 chr5B 80.120 166 31 2 652 816 635605993 635606157 4.080000e-24 122.0
20 TraesCS2B01G276700 chr5B 100.000 32 0 0 338 369 663641485 663641516 3.240000e-05 60.2
21 TraesCS2B01G276700 chr7B 93.204 103 5 2 2269 2370 652980400 652980501 1.870000e-32 150.0
22 TraesCS2B01G276700 chr7B 96.970 33 1 0 481 513 124734308 124734276 4.200000e-04 56.5
23 TraesCS2B01G276700 chr4A 93.939 99 4 2 2280 2377 571438368 571438271 6.730000e-32 148.0
24 TraesCS2B01G276700 chr4A 83.908 87 14 0 422 508 616214419 616214505 1.930000e-12 84.2
25 TraesCS2B01G276700 chr6B 93.939 99 3 3 2280 2377 609097629 609097533 2.420000e-31 147.0
26 TraesCS2B01G276700 chr6B 85.106 141 20 1 366 505 286708599 286708459 3.130000e-30 143.0
27 TraesCS2B01G276700 chr6B 76.667 210 25 11 1 206 654834790 654834979 8.900000e-16 95.3
28 TraesCS2B01G276700 chr6B 100.000 32 0 0 338 369 71592718 71592687 3.240000e-05 60.2
29 TraesCS2B01G276700 chr6B 100.000 31 0 0 338 368 181505453 181505483 1.170000e-04 58.4
30 TraesCS2B01G276700 chr7D 90.909 110 6 4 2275 2380 45404604 45404495 8.710000e-31 145.0
31 TraesCS2B01G276700 chr6D 93.000 100 5 2 2279 2376 350223055 350223154 8.710000e-31 145.0
32 TraesCS2B01G276700 chr4D 82.812 128 21 1 381 507 23422473 23422600 2.460000e-21 113.0
33 TraesCS2B01G276700 chr4D 97.297 37 0 1 338 374 446700205 446700240 9.020000e-06 62.1
34 TraesCS2B01G276700 chr4D 97.059 34 0 1 338 370 361041910 361041877 4.200000e-04 56.5
35 TraesCS2B01G276700 chr6A 81.890 127 21 2 381 505 570972498 570972372 4.110000e-19 106.0
36 TraesCS2B01G276700 chr4B 78.992 119 17 5 2712 2826 514749388 514749274 1.160000e-09 75.0
37 TraesCS2B01G276700 chr4B 78.992 119 17 5 2712 2826 514805578 514805464 1.160000e-09 75.0
38 TraesCS2B01G276700 chr7A 94.595 37 2 0 338 374 571323898 571323934 1.170000e-04 58.4
39 TraesCS2B01G276700 chr3A 100.000 31 0 0 338 368 458190586 458190616 1.170000e-04 58.4
40 TraesCS2B01G276700 chrUn 79.747 79 15 1 2748 2826 412583915 412583992 4.200000e-04 56.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G276700 chr2B 382502467 382505480 3013 True 5566.000000 5566 100.0000 1 3014 1 chr2B.!!$R1 3013
1 TraesCS2B01G276700 chr2D 314317573 314320062 2489 True 1321.666667 2084 96.2880 523 3014 3 chr2D.!!$R2 2491
2 TraesCS2B01G276700 chr3B 729167639 729169375 1736 True 1183.500000 1816 91.1875 611 2286 2 chr3B.!!$R1 1675
3 TraesCS2B01G276700 chr2A 421248937 421251649 2712 False 837.500000 1729 92.8090 598 3014 4 chr2A.!!$F3 2416

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
32 33 0.038159 GCAGACGCTGGTACACTTCT 60.038 55.0 8.57 0.00 34.30 2.85 F
157 158 0.038618 TATCGATCCAACGGCGGATG 60.039 55.0 13.24 10.07 46.13 3.51 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1211 1214 0.543749 GGGGTGATGAAGAGAGGTGG 59.456 60.0 0.0 0.0 0.0 4.61 R
2035 2463 1.291877 CCACCTTGACGAAGAAGCCG 61.292 60.0 0.0 0.0 0.0 5.52 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
18 19 3.460648 AGCTTACGGGATTGCAGAC 57.539 52.632 0.00 0.00 0.00 3.51
19 20 0.460284 AGCTTACGGGATTGCAGACG 60.460 55.000 0.00 0.00 0.00 4.18
20 21 2.006772 CTTACGGGATTGCAGACGC 58.993 57.895 0.00 0.00 39.24 5.19
21 22 0.460284 CTTACGGGATTGCAGACGCT 60.460 55.000 7.42 0.00 39.64 5.07
22 23 0.739462 TTACGGGATTGCAGACGCTG 60.739 55.000 2.92 2.92 39.64 5.18
23 24 2.572095 TACGGGATTGCAGACGCTGG 62.572 60.000 8.57 0.00 39.64 4.85
24 25 2.045926 GGGATTGCAGACGCTGGT 60.046 61.111 8.57 0.00 39.64 4.00
25 26 1.220749 GGGATTGCAGACGCTGGTA 59.779 57.895 8.57 0.00 39.64 3.25
26 27 1.090052 GGGATTGCAGACGCTGGTAC 61.090 60.000 8.57 0.00 39.64 3.34
27 28 0.391130 GGATTGCAGACGCTGGTACA 60.391 55.000 8.57 0.00 39.64 2.90
28 29 0.721718 GATTGCAGACGCTGGTACAC 59.278 55.000 8.57 0.00 39.64 2.90
29 30 0.321671 ATTGCAGACGCTGGTACACT 59.678 50.000 8.57 0.00 39.64 3.55
30 31 0.105964 TTGCAGACGCTGGTACACTT 59.894 50.000 8.57 0.00 39.64 3.16
31 32 0.319555 TGCAGACGCTGGTACACTTC 60.320 55.000 8.57 0.00 39.64 3.01
32 33 0.038159 GCAGACGCTGGTACACTTCT 60.038 55.000 8.57 0.00 34.30 2.85
33 34 1.605712 GCAGACGCTGGTACACTTCTT 60.606 52.381 8.57 0.00 34.30 2.52
34 35 2.755650 CAGACGCTGGTACACTTCTTT 58.244 47.619 0.00 0.00 0.00 2.52
35 36 2.731976 CAGACGCTGGTACACTTCTTTC 59.268 50.000 0.00 0.00 0.00 2.62
36 37 2.628657 AGACGCTGGTACACTTCTTTCT 59.371 45.455 0.00 0.00 0.00 2.52
37 38 3.069729 AGACGCTGGTACACTTCTTTCTT 59.930 43.478 0.00 0.00 0.00 2.52
38 39 3.131396 ACGCTGGTACACTTCTTTCTTG 58.869 45.455 0.00 0.00 0.00 3.02
39 40 3.131396 CGCTGGTACACTTCTTTCTTGT 58.869 45.455 0.00 0.00 0.00 3.16
40 41 3.059597 CGCTGGTACACTTCTTTCTTGTG 60.060 47.826 0.00 0.00 37.67 3.33
41 42 3.251004 GCTGGTACACTTCTTTCTTGTGG 59.749 47.826 0.00 0.00 36.16 4.17
42 43 4.703897 CTGGTACACTTCTTTCTTGTGGA 58.296 43.478 0.00 0.00 36.16 4.02
43 44 4.703897 TGGTACACTTCTTTCTTGTGGAG 58.296 43.478 0.00 0.00 36.16 3.86
44 45 4.407621 TGGTACACTTCTTTCTTGTGGAGA 59.592 41.667 0.00 0.00 36.16 3.71
45 46 4.991687 GGTACACTTCTTTCTTGTGGAGAG 59.008 45.833 0.00 0.00 35.37 3.20
46 47 5.221461 GGTACACTTCTTTCTTGTGGAGAGA 60.221 44.000 0.00 0.00 35.37 3.10
47 48 4.954875 ACACTTCTTTCTTGTGGAGAGAG 58.045 43.478 0.00 0.00 36.69 3.20
48 49 3.745458 CACTTCTTTCTTGTGGAGAGAGC 59.255 47.826 0.00 0.00 36.69 4.09
49 50 3.244387 ACTTCTTTCTTGTGGAGAGAGCC 60.244 47.826 0.00 0.00 36.69 4.70
50 51 2.329267 TCTTTCTTGTGGAGAGAGCCA 58.671 47.619 0.00 0.00 36.73 4.75
51 52 2.705658 TCTTTCTTGTGGAGAGAGCCAA 59.294 45.455 0.00 0.00 40.20 4.52
52 53 2.550830 TTCTTGTGGAGAGAGCCAAC 57.449 50.000 0.00 0.00 40.20 3.77
53 54 0.318441 TCTTGTGGAGAGAGCCAACG 59.682 55.000 0.00 0.00 40.20 4.10
54 55 0.671781 CTTGTGGAGAGAGCCAACGG 60.672 60.000 0.00 0.00 40.20 4.44
67 68 4.295119 AACGGCTGGAGCGACGTT 62.295 61.111 9.10 9.10 41.55 3.99
68 69 3.802418 AACGGCTGGAGCGACGTTT 62.802 57.895 9.10 0.00 42.93 3.60
69 70 3.777925 CGGCTGGAGCGACGTTTG 61.778 66.667 0.00 0.00 43.26 2.93
70 71 2.357034 GGCTGGAGCGACGTTTGA 60.357 61.111 0.00 0.00 43.26 2.69
71 72 2.668280 GGCTGGAGCGACGTTTGAC 61.668 63.158 0.00 0.00 43.26 3.18
72 73 2.668280 GCTGGAGCGACGTTTGACC 61.668 63.158 0.00 0.00 0.00 4.02
73 74 2.027625 CTGGAGCGACGTTTGACCC 61.028 63.158 0.00 0.00 0.00 4.46
74 75 3.110178 GGAGCGACGTTTGACCCG 61.110 66.667 0.00 0.00 0.00 5.28
75 76 3.774702 GAGCGACGTTTGACCCGC 61.775 66.667 8.81 8.81 47.00 6.13
79 80 4.072088 GACGTTTGACCCGCGCTG 62.072 66.667 5.56 0.00 0.00 5.18
82 83 2.975799 GTTTGACCCGCGCTGGAA 60.976 61.111 25.71 9.36 42.00 3.53
83 84 2.033448 TTTGACCCGCGCTGGAAT 59.967 55.556 25.71 2.13 42.00 3.01
84 85 1.602323 TTTGACCCGCGCTGGAATT 60.602 52.632 25.71 1.26 42.00 2.17
85 86 1.175983 TTTGACCCGCGCTGGAATTT 61.176 50.000 25.71 0.83 42.00 1.82
86 87 1.175983 TTGACCCGCGCTGGAATTTT 61.176 50.000 25.71 0.39 42.00 1.82
87 88 1.175983 TGACCCGCGCTGGAATTTTT 61.176 50.000 25.71 0.00 42.00 1.94
88 89 0.456142 GACCCGCGCTGGAATTTTTC 60.456 55.000 25.71 6.50 42.00 2.29
89 90 0.893727 ACCCGCGCTGGAATTTTTCT 60.894 50.000 25.71 0.00 42.00 2.52
90 91 1.091537 CCCGCGCTGGAATTTTTCTA 58.908 50.000 13.28 0.00 42.00 2.10
91 92 1.064060 CCCGCGCTGGAATTTTTCTAG 59.936 52.381 13.28 0.00 42.00 2.43
92 93 2.006888 CCGCGCTGGAATTTTTCTAGA 58.993 47.619 12.11 0.00 40.34 2.43
93 94 2.614057 CCGCGCTGGAATTTTTCTAGAT 59.386 45.455 12.11 0.00 40.34 1.98
94 95 3.546815 CCGCGCTGGAATTTTTCTAGATG 60.547 47.826 12.11 0.00 40.34 2.90
95 96 3.309682 CGCGCTGGAATTTTTCTAGATGA 59.690 43.478 5.56 0.00 40.34 2.92
96 97 4.201812 CGCGCTGGAATTTTTCTAGATGAA 60.202 41.667 5.56 0.00 40.34 2.57
97 98 5.640732 GCGCTGGAATTTTTCTAGATGAAA 58.359 37.500 0.00 0.00 40.34 2.69
98 99 9.891064 CCGCGCTGGAATTTTTCTAGATGAAAA 62.891 40.741 12.11 5.10 45.28 2.29
106 107 3.719268 TTCTAGATGAAAAGCAGGGCA 57.281 42.857 0.00 0.00 0.00 5.36
107 108 3.272574 TCTAGATGAAAAGCAGGGCAG 57.727 47.619 0.00 0.00 0.00 4.85
108 109 2.092753 TCTAGATGAAAAGCAGGGCAGG 60.093 50.000 0.00 0.00 0.00 4.85
109 110 0.324091 AGATGAAAAGCAGGGCAGGG 60.324 55.000 0.00 0.00 0.00 4.45
110 111 1.305549 ATGAAAAGCAGGGCAGGGG 60.306 57.895 0.00 0.00 0.00 4.79
111 112 2.681421 GAAAAGCAGGGCAGGGGG 60.681 66.667 0.00 0.00 0.00 5.40
112 113 3.192630 AAAAGCAGGGCAGGGGGA 61.193 61.111 0.00 0.00 0.00 4.81
113 114 3.229659 AAAAGCAGGGCAGGGGGAG 62.230 63.158 0.00 0.00 0.00 4.30
122 123 4.641645 CAGGGGGAGCACAACGCA 62.642 66.667 0.00 0.00 46.13 5.24
123 124 4.335647 AGGGGGAGCACAACGCAG 62.336 66.667 0.00 0.00 46.13 5.18
125 126 4.329545 GGGGAGCACAACGCAGGA 62.330 66.667 0.00 0.00 46.13 3.86
126 127 2.281484 GGGAGCACAACGCAGGAA 60.281 61.111 0.00 0.00 46.13 3.36
127 128 2.328099 GGGAGCACAACGCAGGAAG 61.328 63.158 0.00 0.00 46.13 3.46
128 129 2.558313 GAGCACAACGCAGGAAGC 59.442 61.111 0.00 0.00 46.13 3.86
129 130 2.203195 AGCACAACGCAGGAAGCA 60.203 55.556 0.00 0.00 46.13 3.91
130 131 2.180131 GAGCACAACGCAGGAAGCAG 62.180 60.000 0.00 0.00 46.13 4.24
131 132 2.949106 CACAACGCAGGAAGCAGG 59.051 61.111 0.00 0.00 46.13 4.85
132 133 1.597854 CACAACGCAGGAAGCAGGA 60.598 57.895 0.00 0.00 46.13 3.86
133 134 0.957395 CACAACGCAGGAAGCAGGAT 60.957 55.000 0.00 0.00 46.13 3.24
134 135 0.957395 ACAACGCAGGAAGCAGGATG 60.957 55.000 0.00 0.00 46.13 3.51
135 136 0.674581 CAACGCAGGAAGCAGGATGA 60.675 55.000 0.00 0.00 46.13 2.92
136 137 0.392193 AACGCAGGAAGCAGGATGAG 60.392 55.000 0.00 0.00 46.13 2.90
137 138 1.220206 CGCAGGAAGCAGGATGAGT 59.780 57.895 0.00 0.00 46.13 3.41
138 139 0.392193 CGCAGGAAGCAGGATGAGTT 60.392 55.000 0.00 0.00 46.13 3.01
139 140 1.134699 CGCAGGAAGCAGGATGAGTTA 60.135 52.381 0.00 0.00 46.13 2.24
140 141 2.484417 CGCAGGAAGCAGGATGAGTTAT 60.484 50.000 0.00 0.00 46.13 1.89
141 142 3.137533 GCAGGAAGCAGGATGAGTTATC 58.862 50.000 0.00 0.00 44.79 1.75
142 143 3.388308 CAGGAAGCAGGATGAGTTATCG 58.612 50.000 0.00 0.00 39.69 2.92
143 144 3.068732 CAGGAAGCAGGATGAGTTATCGA 59.931 47.826 0.00 0.00 39.69 3.59
144 145 3.900601 AGGAAGCAGGATGAGTTATCGAT 59.099 43.478 2.16 2.16 39.69 3.59
145 146 4.021544 AGGAAGCAGGATGAGTTATCGATC 60.022 45.833 0.00 0.00 39.69 3.69
146 147 3.951775 AGCAGGATGAGTTATCGATCC 57.048 47.619 0.00 0.00 39.69 3.36
147 148 3.234353 AGCAGGATGAGTTATCGATCCA 58.766 45.455 0.00 0.00 39.69 3.41
148 149 3.643320 AGCAGGATGAGTTATCGATCCAA 59.357 43.478 0.00 0.00 39.69 3.53
149 150 3.743396 GCAGGATGAGTTATCGATCCAAC 59.257 47.826 0.00 1.45 39.69 3.77
150 151 3.983988 CAGGATGAGTTATCGATCCAACG 59.016 47.826 0.00 0.00 39.69 4.10
151 152 3.005897 AGGATGAGTTATCGATCCAACGG 59.994 47.826 0.00 0.00 36.42 4.44
152 153 2.218953 TGAGTTATCGATCCAACGGC 57.781 50.000 0.00 0.94 0.00 5.68
153 154 1.129326 GAGTTATCGATCCAACGGCG 58.871 55.000 4.80 4.80 0.00 6.46
154 155 0.249322 AGTTATCGATCCAACGGCGG 60.249 55.000 13.24 0.00 0.00 6.13
155 156 0.249155 GTTATCGATCCAACGGCGGA 60.249 55.000 13.24 0.00 40.07 5.54
157 158 0.038618 TATCGATCCAACGGCGGATG 60.039 55.000 13.24 10.07 46.13 3.51
158 159 2.028125 ATCGATCCAACGGCGGATGT 62.028 55.000 13.24 0.00 46.13 3.06
159 160 2.525248 CGATCCAACGGCGGATGTG 61.525 63.158 13.24 3.37 46.13 3.21
160 161 1.449601 GATCCAACGGCGGATGTGT 60.450 57.895 13.24 0.46 46.13 3.72
161 162 1.429148 GATCCAACGGCGGATGTGTC 61.429 60.000 13.24 6.47 46.13 3.67
162 163 2.178876 ATCCAACGGCGGATGTGTCA 62.179 55.000 13.24 0.00 44.40 3.58
163 164 2.677003 CCAACGGCGGATGTGTCAC 61.677 63.158 13.24 0.00 0.00 3.67
164 165 1.667830 CAACGGCGGATGTGTCACT 60.668 57.895 13.24 0.00 0.00 3.41
165 166 0.389296 CAACGGCGGATGTGTCACTA 60.389 55.000 13.24 0.00 0.00 2.74
166 167 0.535335 AACGGCGGATGTGTCACTAT 59.465 50.000 13.24 0.00 0.00 2.12
167 168 0.535335 ACGGCGGATGTGTCACTATT 59.465 50.000 13.24 0.00 0.00 1.73
168 169 0.930310 CGGCGGATGTGTCACTATTG 59.070 55.000 0.00 0.00 0.00 1.90
169 170 1.470805 CGGCGGATGTGTCACTATTGA 60.471 52.381 0.00 0.00 0.00 2.57
170 171 2.627945 GGCGGATGTGTCACTATTGAA 58.372 47.619 4.27 0.00 31.90 2.69
171 172 2.351726 GGCGGATGTGTCACTATTGAAC 59.648 50.000 4.27 0.00 31.90 3.18
172 173 2.029244 GCGGATGTGTCACTATTGAACG 59.971 50.000 4.27 1.27 31.90 3.95
173 174 2.603110 CGGATGTGTCACTATTGAACGG 59.397 50.000 4.27 0.00 31.90 4.44
174 175 3.596214 GGATGTGTCACTATTGAACGGT 58.404 45.455 4.27 0.00 31.90 4.83
175 176 3.370978 GGATGTGTCACTATTGAACGGTG 59.629 47.826 4.27 0.00 31.90 4.94
176 177 2.139917 TGTGTCACTATTGAACGGTGC 58.860 47.619 4.27 0.00 31.90 5.01
177 178 1.126113 GTGTCACTATTGAACGGTGCG 59.874 52.381 0.00 0.00 31.90 5.34
178 179 0.719465 GTCACTATTGAACGGTGCGG 59.281 55.000 0.00 0.00 31.90 5.69
179 180 0.390603 TCACTATTGAACGGTGCGGG 60.391 55.000 0.00 0.00 0.00 6.13
180 181 0.390603 CACTATTGAACGGTGCGGGA 60.391 55.000 0.00 0.00 0.00 5.14
181 182 0.108329 ACTATTGAACGGTGCGGGAG 60.108 55.000 0.00 0.00 0.00 4.30
182 183 0.810031 CTATTGAACGGTGCGGGAGG 60.810 60.000 0.00 0.00 0.00 4.30
183 184 2.862674 TATTGAACGGTGCGGGAGGC 62.863 60.000 0.00 0.00 43.96 4.70
192 193 4.547367 GCGGGAGGCGGCTTATGT 62.547 66.667 14.76 0.00 0.00 2.29
193 194 2.189521 CGGGAGGCGGCTTATGTT 59.810 61.111 14.76 0.00 0.00 2.71
194 195 1.451387 CGGGAGGCGGCTTATGTTT 60.451 57.895 14.76 0.00 0.00 2.83
195 196 1.029947 CGGGAGGCGGCTTATGTTTT 61.030 55.000 14.76 0.00 0.00 2.43
196 197 1.182667 GGGAGGCGGCTTATGTTTTT 58.817 50.000 14.76 0.00 0.00 1.94
197 198 1.134367 GGGAGGCGGCTTATGTTTTTC 59.866 52.381 14.76 0.00 0.00 2.29
198 199 1.134367 GGAGGCGGCTTATGTTTTTCC 59.866 52.381 14.76 2.14 0.00 3.13
199 200 2.092323 GAGGCGGCTTATGTTTTTCCT 58.908 47.619 14.76 0.00 0.00 3.36
200 201 3.275999 GAGGCGGCTTATGTTTTTCCTA 58.724 45.455 14.76 0.00 0.00 2.94
201 202 3.692593 GAGGCGGCTTATGTTTTTCCTAA 59.307 43.478 14.76 0.00 0.00 2.69
202 203 4.083565 AGGCGGCTTATGTTTTTCCTAAA 58.916 39.130 5.25 0.00 0.00 1.85
203 204 4.525100 AGGCGGCTTATGTTTTTCCTAAAA 59.475 37.500 5.25 0.00 0.00 1.52
204 205 5.186992 AGGCGGCTTATGTTTTTCCTAAAAT 59.813 36.000 5.25 0.00 35.80 1.82
205 206 5.518847 GGCGGCTTATGTTTTTCCTAAAATC 59.481 40.000 0.00 0.00 35.80 2.17
206 207 6.096695 GCGGCTTATGTTTTTCCTAAAATCA 58.903 36.000 0.00 0.00 35.80 2.57
207 208 6.253512 GCGGCTTATGTTTTTCCTAAAATCAG 59.746 38.462 0.00 0.00 35.80 2.90
208 209 7.535139 CGGCTTATGTTTTTCCTAAAATCAGA 58.465 34.615 0.00 0.00 35.80 3.27
209 210 7.484959 CGGCTTATGTTTTTCCTAAAATCAGAC 59.515 37.037 0.00 0.00 35.80 3.51
210 211 7.484959 GGCTTATGTTTTTCCTAAAATCAGACG 59.515 37.037 0.00 0.00 35.80 4.18
211 212 7.484959 GCTTATGTTTTTCCTAAAATCAGACGG 59.515 37.037 0.00 0.00 35.80 4.79
212 213 8.624367 TTATGTTTTTCCTAAAATCAGACGGA 57.376 30.769 0.00 0.00 35.80 4.69
213 214 7.703058 ATGTTTTTCCTAAAATCAGACGGAT 57.297 32.000 0.00 0.00 35.80 4.18
214 215 6.908825 TGTTTTTCCTAAAATCAGACGGATG 58.091 36.000 0.00 0.00 35.80 3.51
215 216 6.712998 TGTTTTTCCTAAAATCAGACGGATGA 59.287 34.615 0.00 0.00 35.80 2.92
216 217 7.393234 TGTTTTTCCTAAAATCAGACGGATGAT 59.607 33.333 0.00 0.00 41.72 2.45
217 218 6.925610 TTTCCTAAAATCAGACGGATGATG 57.074 37.500 5.51 0.00 39.84 3.07
218 219 4.380531 TCCTAAAATCAGACGGATGATGC 58.619 43.478 5.51 0.00 39.84 3.91
219 220 4.101585 TCCTAAAATCAGACGGATGATGCT 59.898 41.667 5.51 0.11 39.84 3.79
220 221 4.818546 CCTAAAATCAGACGGATGATGCTT 59.181 41.667 5.51 5.55 39.84 3.91
221 222 5.991606 CCTAAAATCAGACGGATGATGCTTA 59.008 40.000 5.51 6.23 39.84 3.09
222 223 5.998454 AAAATCAGACGGATGATGCTTAG 57.002 39.130 5.51 0.00 39.84 2.18
223 224 2.515926 TCAGACGGATGATGCTTAGC 57.484 50.000 0.00 0.00 0.00 3.09
224 225 1.756538 TCAGACGGATGATGCTTAGCA 59.243 47.619 10.09 10.09 44.86 3.49
225 226 2.168313 TCAGACGGATGATGCTTAGCAA 59.832 45.455 12.08 0.00 43.62 3.91
226 227 2.543012 CAGACGGATGATGCTTAGCAAG 59.457 50.000 12.08 1.57 43.62 4.01
235 236 3.496898 GCTTAGCAAGCGCCTTTTT 57.503 47.368 2.29 0.00 45.74 1.94
260 261 9.859427 TTTTAGGATGATTCTACTGCAATTTTG 57.141 29.630 0.00 0.00 0.00 2.44
261 262 6.461110 AGGATGATTCTACTGCAATTTTGG 57.539 37.500 0.00 0.00 0.00 3.28
262 263 5.954150 AGGATGATTCTACTGCAATTTTGGT 59.046 36.000 0.00 0.00 0.00 3.67
263 264 7.118723 AGGATGATTCTACTGCAATTTTGGTA 58.881 34.615 0.00 0.00 0.00 3.25
264 265 7.781693 AGGATGATTCTACTGCAATTTTGGTAT 59.218 33.333 0.00 0.00 0.00 2.73
265 266 7.864379 GGATGATTCTACTGCAATTTTGGTATG 59.136 37.037 0.00 0.00 0.00 2.39
266 267 7.701539 TGATTCTACTGCAATTTTGGTATGT 57.298 32.000 0.00 0.00 0.00 2.29
267 268 8.800370 TGATTCTACTGCAATTTTGGTATGTA 57.200 30.769 0.00 0.00 0.00 2.29
268 269 8.673711 TGATTCTACTGCAATTTTGGTATGTAC 58.326 33.333 0.00 0.00 0.00 2.90
269 270 7.987750 TTCTACTGCAATTTTGGTATGTACA 57.012 32.000 0.00 0.00 0.00 2.90
270 271 7.987750 TCTACTGCAATTTTGGTATGTACAA 57.012 32.000 0.00 0.00 0.00 2.41
271 272 8.574251 TCTACTGCAATTTTGGTATGTACAAT 57.426 30.769 0.00 0.00 0.00 2.71
272 273 9.674068 TCTACTGCAATTTTGGTATGTACAATA 57.326 29.630 0.00 0.00 0.00 1.90
305 306 8.970859 TTAACAACAAAATCAAAATGGATGGT 57.029 26.923 0.00 0.00 0.00 3.55
307 308 8.970859 AACAACAAAATCAAAATGGATGGTAA 57.029 26.923 0.00 0.00 0.00 2.85
308 309 8.970859 ACAACAAAATCAAAATGGATGGTAAA 57.029 26.923 0.00 0.00 0.00 2.01
309 310 9.571816 ACAACAAAATCAAAATGGATGGTAAAT 57.428 25.926 0.00 0.00 0.00 1.40
318 319 9.211410 TCAAAATGGATGGTAAATTATGATGGT 57.789 29.630 0.00 0.00 0.00 3.55
319 320 9.835389 CAAAATGGATGGTAAATTATGATGGTT 57.165 29.630 0.00 0.00 0.00 3.67
334 335 8.808240 TTATGATGGTTATTAGGTACTCCCTT 57.192 34.615 0.00 0.00 42.73 3.95
335 336 6.742559 TGATGGTTATTAGGTACTCCCTTC 57.257 41.667 0.00 0.00 42.73 3.46
336 337 5.303589 TGATGGTTATTAGGTACTCCCTTCG 59.696 44.000 0.00 0.00 42.73 3.79
337 338 4.613437 TGGTTATTAGGTACTCCCTTCGT 58.387 43.478 0.00 0.00 42.73 3.85
338 339 5.025453 TGGTTATTAGGTACTCCCTTCGTT 58.975 41.667 0.00 0.00 42.73 3.85
339 340 5.105228 TGGTTATTAGGTACTCCCTTCGTTG 60.105 44.000 0.00 0.00 42.73 4.10
340 341 3.538634 ATTAGGTACTCCCTTCGTTGC 57.461 47.619 0.00 0.00 42.73 4.17
341 342 1.927487 TAGGTACTCCCTTCGTTGCA 58.073 50.000 0.00 0.00 42.73 4.08
342 343 1.053424 AGGTACTCCCTTCGTTGCAA 58.947 50.000 0.00 0.00 42.73 4.08
343 344 1.418637 AGGTACTCCCTTCGTTGCAAA 59.581 47.619 0.00 0.00 42.73 3.68
344 345 2.039879 AGGTACTCCCTTCGTTGCAAAT 59.960 45.455 0.00 0.00 42.73 2.32
345 346 2.418976 GGTACTCCCTTCGTTGCAAATC 59.581 50.000 0.00 0.00 0.00 2.17
346 347 1.534729 ACTCCCTTCGTTGCAAATCC 58.465 50.000 0.00 0.00 0.00 3.01
347 348 1.073923 ACTCCCTTCGTTGCAAATCCT 59.926 47.619 0.00 0.00 0.00 3.24
348 349 1.470098 CTCCCTTCGTTGCAAATCCTG 59.530 52.381 0.00 0.00 0.00 3.86
349 350 1.202879 TCCCTTCGTTGCAAATCCTGT 60.203 47.619 0.00 0.00 0.00 4.00
350 351 1.068333 CCCTTCGTTGCAAATCCTGTG 60.068 52.381 0.00 0.00 0.00 3.66
351 352 1.879380 CCTTCGTTGCAAATCCTGTGA 59.121 47.619 0.00 0.00 0.00 3.58
352 353 2.489329 CCTTCGTTGCAAATCCTGTGAT 59.511 45.455 0.00 0.00 0.00 3.06
353 354 3.426695 CCTTCGTTGCAAATCCTGTGATC 60.427 47.826 0.00 0.00 0.00 2.92
354 355 2.083774 TCGTTGCAAATCCTGTGATCC 58.916 47.619 0.00 0.00 0.00 3.36
355 356 1.811965 CGTTGCAAATCCTGTGATCCA 59.188 47.619 0.00 0.00 0.00 3.41
356 357 2.228582 CGTTGCAAATCCTGTGATCCAA 59.771 45.455 0.00 0.00 0.00 3.53
357 358 3.305267 CGTTGCAAATCCTGTGATCCAAA 60.305 43.478 0.00 0.00 0.00 3.28
358 359 4.240096 GTTGCAAATCCTGTGATCCAAAG 58.760 43.478 0.00 0.00 0.00 2.77
359 360 3.765381 TGCAAATCCTGTGATCCAAAGA 58.235 40.909 0.00 0.00 0.00 2.52
360 361 4.151121 TGCAAATCCTGTGATCCAAAGAA 58.849 39.130 0.00 0.00 0.00 2.52
361 362 4.219070 TGCAAATCCTGTGATCCAAAGAAG 59.781 41.667 0.00 0.00 0.00 2.85
362 363 4.741342 CAAATCCTGTGATCCAAAGAAGC 58.259 43.478 0.00 0.00 0.00 3.86
363 364 2.496899 TCCTGTGATCCAAAGAAGCC 57.503 50.000 0.00 0.00 0.00 4.35
364 365 1.004745 TCCTGTGATCCAAAGAAGCCC 59.995 52.381 0.00 0.00 0.00 5.19
365 366 1.005215 CCTGTGATCCAAAGAAGCCCT 59.995 52.381 0.00 0.00 0.00 5.19
366 367 2.239654 CCTGTGATCCAAAGAAGCCCTA 59.760 50.000 0.00 0.00 0.00 3.53
367 368 3.308402 CCTGTGATCCAAAGAAGCCCTAA 60.308 47.826 0.00 0.00 0.00 2.69
368 369 4.335416 CTGTGATCCAAAGAAGCCCTAAA 58.665 43.478 0.00 0.00 0.00 1.85
369 370 4.934356 TGTGATCCAAAGAAGCCCTAAAT 58.066 39.130 0.00 0.00 0.00 1.40
370 371 4.949856 TGTGATCCAAAGAAGCCCTAAATC 59.050 41.667 0.00 0.00 0.00 2.17
371 372 5.196695 GTGATCCAAAGAAGCCCTAAATCT 58.803 41.667 0.00 0.00 0.00 2.40
372 373 5.654209 GTGATCCAAAGAAGCCCTAAATCTT 59.346 40.000 0.00 0.00 35.00 2.40
373 374 6.153510 GTGATCCAAAGAAGCCCTAAATCTTT 59.846 38.462 0.00 0.00 42.49 2.52
378 379 6.994421 AAAGAAGCCCTAAATCTTTGGAAA 57.006 33.333 0.00 0.00 40.77 3.13
379 380 5.984695 AGAAGCCCTAAATCTTTGGAAAC 57.015 39.130 0.00 0.00 0.00 2.78
380 381 5.393866 AGAAGCCCTAAATCTTTGGAAACA 58.606 37.500 0.00 0.00 39.83 2.83
381 382 6.019108 AGAAGCCCTAAATCTTTGGAAACAT 58.981 36.000 0.00 0.00 42.32 2.71
382 383 6.498303 AGAAGCCCTAAATCTTTGGAAACATT 59.502 34.615 0.00 0.00 42.32 2.71
383 384 6.686484 AGCCCTAAATCTTTGGAAACATTT 57.314 33.333 0.00 0.00 42.32 2.32
384 385 6.701340 AGCCCTAAATCTTTGGAAACATTTC 58.299 36.000 0.00 0.00 42.32 2.17
385 386 6.269769 AGCCCTAAATCTTTGGAAACATTTCA 59.730 34.615 6.68 0.00 42.32 2.69
386 387 6.368791 GCCCTAAATCTTTGGAAACATTTCAC 59.631 38.462 6.68 0.00 42.32 3.18
387 388 7.670364 CCCTAAATCTTTGGAAACATTTCACT 58.330 34.615 6.68 0.00 42.32 3.41
388 389 8.802267 CCCTAAATCTTTGGAAACATTTCACTA 58.198 33.333 6.68 0.00 42.32 2.74
395 396 9.076781 TCTTTGGAAACATTTCACTATGAATCA 57.923 29.630 6.68 0.00 42.32 2.57
396 397 9.132521 CTTTGGAAACATTTCACTATGAATCAC 57.867 33.333 6.68 0.00 42.32 3.06
397 398 7.757941 TGGAAACATTTCACTATGAATCACA 57.242 32.000 6.68 0.00 38.92 3.58
398 399 8.352137 TGGAAACATTTCACTATGAATCACAT 57.648 30.769 6.68 0.00 39.53 3.21
399 400 9.460019 TGGAAACATTTCACTATGAATCACATA 57.540 29.630 6.68 0.00 38.31 2.29
400 401 9.722056 GGAAACATTTCACTATGAATCACATAC 57.278 33.333 6.68 0.00 36.11 2.39
401 402 9.425893 GAAACATTTCACTATGAATCACATACG 57.574 33.333 0.00 0.00 36.11 3.06
402 403 8.716646 AACATTTCACTATGAATCACATACGA 57.283 30.769 0.00 0.00 36.11 3.43
403 404 8.716646 ACATTTCACTATGAATCACATACGAA 57.283 30.769 0.00 0.00 36.11 3.85
404 405 8.820933 ACATTTCACTATGAATCACATACGAAG 58.179 33.333 0.00 0.00 36.11 3.79
405 406 8.820933 CATTTCACTATGAATCACATACGAAGT 58.179 33.333 0.00 0.00 39.65 3.01
407 408 9.863845 TTTCACTATGAATCACATACGAAGTAA 57.136 29.630 0.00 0.00 40.70 2.24
408 409 9.863845 TTCACTATGAATCACATACGAAGTAAA 57.136 29.630 0.00 0.00 37.81 2.01
464 465 9.725019 ATATACATTGGTATGTGGTTCATAGTG 57.275 33.333 1.22 0.00 44.56 2.74
465 466 6.061022 ACATTGGTATGTGGTTCATAGTGA 57.939 37.500 0.00 0.00 43.29 3.41
466 467 6.480763 ACATTGGTATGTGGTTCATAGTGAA 58.519 36.000 0.00 0.00 43.29 3.18
467 468 6.945435 ACATTGGTATGTGGTTCATAGTGAAA 59.055 34.615 0.00 0.00 43.29 2.69
468 469 7.615365 ACATTGGTATGTGGTTCATAGTGAAAT 59.385 33.333 0.00 0.00 43.29 2.17
469 470 7.624360 TTGGTATGTGGTTCATAGTGAAATC 57.376 36.000 0.00 0.00 38.22 2.17
470 471 6.957631 TGGTATGTGGTTCATAGTGAAATCT 58.042 36.000 0.00 0.00 38.22 2.40
471 472 7.047891 TGGTATGTGGTTCATAGTGAAATCTC 58.952 38.462 0.00 0.00 38.22 2.75
472 473 7.092891 TGGTATGTGGTTCATAGTGAAATCTCT 60.093 37.037 0.00 0.00 38.22 3.10
473 474 8.421784 GGTATGTGGTTCATAGTGAAATCTCTA 58.578 37.037 0.00 0.00 38.22 2.43
474 475 9.250624 GTATGTGGTTCATAGTGAAATCTCTAC 57.749 37.037 0.00 0.00 38.22 2.59
475 476 6.330278 TGTGGTTCATAGTGAAATCTCTACG 58.670 40.000 0.00 0.00 38.22 3.51
476 477 6.152154 TGTGGTTCATAGTGAAATCTCTACGA 59.848 38.462 0.00 0.00 38.22 3.43
477 478 7.033791 GTGGTTCATAGTGAAATCTCTACGAA 58.966 38.462 0.00 0.00 38.22 3.85
478 479 7.009357 GTGGTTCATAGTGAAATCTCTACGAAC 59.991 40.741 16.83 16.83 40.95 3.95
479 480 7.033791 GGTTCATAGTGAAATCTCTACGAACA 58.966 38.462 22.28 0.00 42.22 3.18
480 481 7.009357 GGTTCATAGTGAAATCTCTACGAACAC 59.991 40.741 22.28 13.64 42.22 3.32
481 482 7.392494 TCATAGTGAAATCTCTACGAACACT 57.608 36.000 0.00 0.00 37.84 3.55
482 483 7.827701 TCATAGTGAAATCTCTACGAACACTT 58.172 34.615 0.00 0.00 36.62 3.16
483 484 8.953313 TCATAGTGAAATCTCTACGAACACTTA 58.047 33.333 0.00 0.00 36.62 2.24
484 485 9.737427 CATAGTGAAATCTCTACGAACACTTAT 57.263 33.333 0.00 0.00 36.62 1.73
495 496 9.460906 CTCTACGAACACTTATATTTAGGAACC 57.539 37.037 0.00 0.00 0.00 3.62
496 497 8.131100 TCTACGAACACTTATATTTAGGAACCG 58.869 37.037 0.00 0.00 0.00 4.44
497 498 6.866480 ACGAACACTTATATTTAGGAACCGA 58.134 36.000 0.00 0.00 0.00 4.69
498 499 6.976925 ACGAACACTTATATTTAGGAACCGAG 59.023 38.462 0.00 0.00 0.00 4.63
499 500 6.420008 CGAACACTTATATTTAGGAACCGAGG 59.580 42.308 0.00 0.00 0.00 4.63
500 501 6.170846 ACACTTATATTTAGGAACCGAGGG 57.829 41.667 0.00 0.00 0.00 4.30
501 502 5.901276 ACACTTATATTTAGGAACCGAGGGA 59.099 40.000 0.00 0.00 0.00 4.20
502 503 6.041751 ACACTTATATTTAGGAACCGAGGGAG 59.958 42.308 0.00 0.00 0.00 4.30
503 504 6.041751 CACTTATATTTAGGAACCGAGGGAGT 59.958 42.308 0.00 0.00 0.00 3.85
504 505 7.232127 CACTTATATTTAGGAACCGAGGGAGTA 59.768 40.741 0.00 0.00 0.00 2.59
505 506 7.954620 ACTTATATTTAGGAACCGAGGGAGTAT 59.045 37.037 0.00 0.00 0.00 2.12
506 507 4.957684 ATTTAGGAACCGAGGGAGTATG 57.042 45.455 0.00 0.00 0.00 2.39
507 508 3.675348 TTAGGAACCGAGGGAGTATGA 57.325 47.619 0.00 0.00 0.00 2.15
508 509 2.544844 AGGAACCGAGGGAGTATGAA 57.455 50.000 0.00 0.00 0.00 2.57
509 510 2.829023 AGGAACCGAGGGAGTATGAAA 58.171 47.619 0.00 0.00 0.00 2.69
510 511 3.385115 AGGAACCGAGGGAGTATGAAAT 58.615 45.455 0.00 0.00 0.00 2.17
511 512 4.553678 AGGAACCGAGGGAGTATGAAATA 58.446 43.478 0.00 0.00 0.00 1.40
512 513 5.155905 AGGAACCGAGGGAGTATGAAATAT 58.844 41.667 0.00 0.00 0.00 1.28
513 514 5.607171 AGGAACCGAGGGAGTATGAAATATT 59.393 40.000 0.00 0.00 0.00 1.28
514 515 6.101296 AGGAACCGAGGGAGTATGAAATATTT 59.899 38.462 0.00 0.00 0.00 1.40
515 516 6.771267 GGAACCGAGGGAGTATGAAATATTTT 59.229 38.462 1.43 0.00 0.00 1.82
516 517 7.284716 GGAACCGAGGGAGTATGAAATATTTTT 59.715 37.037 1.43 0.00 0.00 1.94
517 518 9.333724 GAACCGAGGGAGTATGAAATATTTTTA 57.666 33.333 1.43 0.00 0.00 1.52
518 519 8.672823 ACCGAGGGAGTATGAAATATTTTTAC 57.327 34.615 1.43 7.88 0.00 2.01
519 520 7.718314 ACCGAGGGAGTATGAAATATTTTTACC 59.282 37.037 1.43 1.68 0.00 2.85
520 521 7.174426 CCGAGGGAGTATGAAATATTTTTACCC 59.826 40.741 1.43 9.59 0.00 3.69
521 522 7.937394 CGAGGGAGTATGAAATATTTTTACCCT 59.063 37.037 19.35 19.35 0.00 4.34
570 571 1.341209 GAGAACTTGCCCAAACCCAAG 59.659 52.381 0.00 0.00 43.05 3.61
571 572 0.249868 GAACTTGCCCAAACCCAAGC 60.250 55.000 0.00 0.00 41.56 4.01
574 575 3.703513 TTGCCCAAACCCAAGCCCA 62.704 57.895 0.00 0.00 0.00 5.36
592 595 2.164624 CCCACTCGAGACTACCAGAAAG 59.835 54.545 21.68 0.00 0.00 2.62
593 596 2.164624 CCACTCGAGACTACCAGAAAGG 59.835 54.545 21.68 0.00 45.67 3.11
594 597 1.819903 ACTCGAGACTACCAGAAAGGC 59.180 52.381 21.68 0.00 43.14 4.35
595 598 1.819288 CTCGAGACTACCAGAAAGGCA 59.181 52.381 6.58 0.00 43.14 4.75
596 599 1.819288 TCGAGACTACCAGAAAGGCAG 59.181 52.381 0.00 0.00 43.14 4.85
597 600 1.819288 CGAGACTACCAGAAAGGCAGA 59.181 52.381 0.00 0.00 43.14 4.26
598 601 2.231478 CGAGACTACCAGAAAGGCAGAA 59.769 50.000 0.00 0.00 43.14 3.02
599 602 3.306088 CGAGACTACCAGAAAGGCAGAAA 60.306 47.826 0.00 0.00 43.14 2.52
600 603 3.997681 GAGACTACCAGAAAGGCAGAAAC 59.002 47.826 0.00 0.00 43.14 2.78
601 604 3.075148 GACTACCAGAAAGGCAGAAACC 58.925 50.000 0.00 0.00 43.14 3.27
606 609 0.606673 AGAAAGGCAGAAACCCTCGC 60.607 55.000 0.00 0.00 0.00 5.03
638 641 0.736325 ACAAGCGCATCTACGACCAC 60.736 55.000 11.47 0.00 34.06 4.16
1194 1197 1.385756 GCCTGTACTCCTCGGAGACC 61.386 65.000 19.35 9.29 44.53 3.85
1768 1778 6.734137 TGGCACTTACATTTTCAAAGTAGTG 58.266 36.000 0.00 0.00 32.35 2.74
1769 1779 5.629435 GGCACTTACATTTTCAAAGTAGTGC 59.371 40.000 13.74 13.74 39.42 4.40
1784 1794 6.910536 AAGTAGTGCTATATCACTTTGTGC 57.089 37.500 14.06 1.98 44.26 4.57
1786 1796 3.198068 AGTGCTATATCACTTTGTGCCG 58.802 45.455 3.35 0.00 44.26 5.69
1790 1800 4.808895 TGCTATATCACTTTGTGCCGTAAG 59.191 41.667 0.00 0.00 32.98 2.34
1849 1949 2.037901 TGATTTTGTGCATGTGTGGGT 58.962 42.857 0.00 0.00 0.00 4.51
1853 1954 3.444703 TTTGTGCATGTGTGGGTAAAC 57.555 42.857 0.00 0.00 0.00 2.01
1854 1955 2.058593 TGTGCATGTGTGGGTAAACA 57.941 45.000 0.00 0.00 0.00 2.83
1865 1966 3.443329 TGTGGGTAAACATGCTGCTAATG 59.557 43.478 0.00 0.00 0.00 1.90
1996 2424 1.680314 GCTGAGGGGCCAAAAGAGG 60.680 63.158 4.39 0.00 0.00 3.69
2045 2474 2.048222 TGGAGCACGGCTTCTTCG 60.048 61.111 5.87 0.00 39.88 3.79
2061 2490 2.169769 TCTTCGTCAAGGTGGAACTGTT 59.830 45.455 0.00 0.00 36.74 3.16
2087 2518 9.990360 TGAAGTGACTTGTAGTGATTTTATACA 57.010 29.630 0.90 0.00 0.00 2.29
2106 2537 3.480470 ACATAGCCTATGTGGTGCATTC 58.520 45.455 16.39 0.00 46.94 2.67
2142 2573 5.150715 TCATATAGGATCTGCAAGTCCACT 58.849 41.667 16.83 7.78 36.84 4.00
2286 2721 6.314896 GGGATTGCAGATCAGCATAATACTAC 59.685 42.308 14.03 0.00 45.19 2.73
2287 2722 7.102346 GGATTGCAGATCAGCATAATACTACT 58.898 38.462 14.03 0.00 45.19 2.57
2288 2723 7.277539 GGATTGCAGATCAGCATAATACTACTC 59.722 40.741 14.03 0.99 45.19 2.59
2289 2724 6.030548 TGCAGATCAGCATAATACTACTCC 57.969 41.667 8.95 0.00 40.11 3.85
2290 2725 5.047021 TGCAGATCAGCATAATACTACTCCC 60.047 44.000 8.95 0.00 40.11 4.30
2291 2726 5.186797 GCAGATCAGCATAATACTACTCCCT 59.813 44.000 5.05 0.00 0.00 4.20
2292 2727 6.627065 GCAGATCAGCATAATACTACTCCCTC 60.627 46.154 5.05 0.00 0.00 4.30
2293 2728 5.955355 AGATCAGCATAATACTACTCCCTCC 59.045 44.000 0.00 0.00 0.00 4.30
2294 2729 4.079970 TCAGCATAATACTACTCCCTCCG 58.920 47.826 0.00 0.00 0.00 4.63
2295 2730 3.827302 CAGCATAATACTACTCCCTCCGT 59.173 47.826 0.00 0.00 0.00 4.69
2296 2731 4.281182 CAGCATAATACTACTCCCTCCGTT 59.719 45.833 0.00 0.00 0.00 4.44
2297 2732 4.523558 AGCATAATACTACTCCCTCCGTTC 59.476 45.833 0.00 0.00 0.00 3.95
2298 2733 4.321824 GCATAATACTACTCCCTCCGTTCC 60.322 50.000 0.00 0.00 0.00 3.62
2299 2734 3.393426 AATACTACTCCCTCCGTTCCA 57.607 47.619 0.00 0.00 0.00 3.53
2300 2735 2.905415 TACTACTCCCTCCGTTCCAA 57.095 50.000 0.00 0.00 0.00 3.53
2301 2736 2.019807 ACTACTCCCTCCGTTCCAAA 57.980 50.000 0.00 0.00 0.00 3.28
2302 2737 2.332117 ACTACTCCCTCCGTTCCAAAA 58.668 47.619 0.00 0.00 0.00 2.44
2303 2738 2.910977 ACTACTCCCTCCGTTCCAAAAT 59.089 45.455 0.00 0.00 0.00 1.82
2304 2739 4.098894 ACTACTCCCTCCGTTCCAAAATA 58.901 43.478 0.00 0.00 0.00 1.40
2305 2740 3.629142 ACTCCCTCCGTTCCAAAATAG 57.371 47.619 0.00 0.00 0.00 1.73
2306 2741 3.178865 ACTCCCTCCGTTCCAAAATAGA 58.821 45.455 0.00 0.00 0.00 1.98
2307 2742 3.780850 ACTCCCTCCGTTCCAAAATAGAT 59.219 43.478 0.00 0.00 0.00 1.98
2308 2743 4.130118 CTCCCTCCGTTCCAAAATAGATG 58.870 47.826 0.00 0.00 0.00 2.90
2309 2744 3.778075 TCCCTCCGTTCCAAAATAGATGA 59.222 43.478 0.00 0.00 0.00 2.92
2310 2745 3.877508 CCCTCCGTTCCAAAATAGATGAC 59.122 47.826 0.00 0.00 0.00 3.06
2311 2746 4.384208 CCCTCCGTTCCAAAATAGATGACT 60.384 45.833 0.00 0.00 0.00 3.41
2312 2747 4.811557 CCTCCGTTCCAAAATAGATGACTC 59.188 45.833 0.00 0.00 0.00 3.36
2313 2748 5.414789 TCCGTTCCAAAATAGATGACTCA 57.585 39.130 0.00 0.00 0.00 3.41
2314 2749 5.800296 TCCGTTCCAAAATAGATGACTCAA 58.200 37.500 0.00 0.00 0.00 3.02
2315 2750 5.642063 TCCGTTCCAAAATAGATGACTCAAC 59.358 40.000 0.00 0.00 0.00 3.18
2316 2751 5.643777 CCGTTCCAAAATAGATGACTCAACT 59.356 40.000 0.00 0.00 0.00 3.16
2317 2752 6.149474 CCGTTCCAAAATAGATGACTCAACTT 59.851 38.462 0.00 0.00 0.00 2.66
2318 2753 7.308589 CCGTTCCAAAATAGATGACTCAACTTT 60.309 37.037 0.00 0.00 0.00 2.66
2319 2754 7.535258 CGTTCCAAAATAGATGACTCAACTTTG 59.465 37.037 0.00 0.00 0.00 2.77
2320 2755 8.352942 GTTCCAAAATAGATGACTCAACTTTGT 58.647 33.333 0.00 0.00 0.00 2.83
2321 2756 9.567776 TTCCAAAATAGATGACTCAACTTTGTA 57.432 29.630 0.00 0.00 0.00 2.41
2322 2757 8.999431 TCCAAAATAGATGACTCAACTTTGTAC 58.001 33.333 0.00 0.00 0.00 2.90
2323 2758 9.003658 CCAAAATAGATGACTCAACTTTGTACT 57.996 33.333 0.00 0.00 0.00 2.73
2330 2765 9.915629 AGATGACTCAACTTTGTACTAACTTAG 57.084 33.333 0.00 0.00 0.00 2.18
2331 2766 9.694137 GATGACTCAACTTTGTACTAACTTAGT 57.306 33.333 6.68 6.68 42.68 2.24
2359 2794 9.833894 CAAAGTTGAGTCATTTATTTTGAAACG 57.166 29.630 5.72 0.00 0.00 3.60
2360 2795 8.574196 AAGTTGAGTCATTTATTTTGAAACGG 57.426 30.769 0.00 0.00 0.00 4.44
2361 2796 7.936584 AGTTGAGTCATTTATTTTGAAACGGA 58.063 30.769 0.00 0.00 0.00 4.69
2362 2797 8.076178 AGTTGAGTCATTTATTTTGAAACGGAG 58.924 33.333 0.00 0.00 0.00 4.63
2363 2798 6.908825 TGAGTCATTTATTTTGAAACGGAGG 58.091 36.000 0.00 0.00 0.00 4.30
2364 2799 6.072175 TGAGTCATTTATTTTGAAACGGAGGG 60.072 38.462 0.00 0.00 0.00 4.30
2365 2800 6.007703 AGTCATTTATTTTGAAACGGAGGGA 58.992 36.000 0.00 0.00 0.00 4.20
2366 2801 6.151144 AGTCATTTATTTTGAAACGGAGGGAG 59.849 38.462 0.00 0.00 0.00 4.30
2367 2802 6.007703 TCATTTATTTTGAAACGGAGGGAGT 58.992 36.000 0.00 0.00 0.00 3.85
2368 2803 7.120138 GTCATTTATTTTGAAACGGAGGGAGTA 59.880 37.037 0.00 0.00 0.00 2.59
2622 3059 4.843220 ATACATAAGCAAGCATGGAAGC 57.157 40.909 0.00 0.00 0.00 3.86
2880 3331 9.683069 ACATCACAAAGATAAATTGACTTCAAC 57.317 29.630 0.00 0.00 35.25 3.18
2928 3379 2.679996 TGCCGGCTACTGCTCTGA 60.680 61.111 29.70 0.00 39.59 3.27
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1 2 2.006772 CGTCTGCAATCCCGTAAGC 58.993 57.895 0.00 0.00 0.00 3.09
2 3 0.460284 AGCGTCTGCAATCCCGTAAG 60.460 55.000 0.00 0.00 46.23 2.34
3 4 0.739462 CAGCGTCTGCAATCCCGTAA 60.739 55.000 0.00 0.00 46.23 3.18
4 5 1.153647 CAGCGTCTGCAATCCCGTA 60.154 57.895 0.00 0.00 46.23 4.02
5 6 2.434884 CAGCGTCTGCAATCCCGT 60.435 61.111 0.00 0.00 46.23 5.28
6 7 2.572095 TACCAGCGTCTGCAATCCCG 62.572 60.000 0.00 0.00 46.23 5.14
7 8 1.090052 GTACCAGCGTCTGCAATCCC 61.090 60.000 0.00 0.00 46.23 3.85
8 9 0.391130 TGTACCAGCGTCTGCAATCC 60.391 55.000 0.00 0.00 46.23 3.01
9 10 0.721718 GTGTACCAGCGTCTGCAATC 59.278 55.000 0.00 0.00 46.23 2.67
10 11 0.321671 AGTGTACCAGCGTCTGCAAT 59.678 50.000 0.00 0.00 46.23 3.56
11 12 0.105964 AAGTGTACCAGCGTCTGCAA 59.894 50.000 0.00 0.00 46.23 4.08
12 13 0.319555 GAAGTGTACCAGCGTCTGCA 60.320 55.000 1.84 0.00 46.23 4.41
13 14 0.038159 AGAAGTGTACCAGCGTCTGC 60.038 55.000 1.84 0.00 43.24 4.26
14 15 2.440539 AAGAAGTGTACCAGCGTCTG 57.559 50.000 0.00 0.52 0.00 3.51
15 16 2.628657 AGAAAGAAGTGTACCAGCGTCT 59.371 45.455 0.00 0.00 0.00 4.18
16 17 3.027974 AGAAAGAAGTGTACCAGCGTC 57.972 47.619 0.00 0.00 0.00 5.19
17 18 3.131396 CAAGAAAGAAGTGTACCAGCGT 58.869 45.455 0.00 0.00 0.00 5.07
18 19 3.059597 CACAAGAAAGAAGTGTACCAGCG 60.060 47.826 0.00 0.00 0.00 5.18
19 20 3.251004 CCACAAGAAAGAAGTGTACCAGC 59.749 47.826 0.00 0.00 0.00 4.85
20 21 4.703897 TCCACAAGAAAGAAGTGTACCAG 58.296 43.478 0.00 0.00 0.00 4.00
21 22 4.407621 TCTCCACAAGAAAGAAGTGTACCA 59.592 41.667 0.00 0.00 0.00 3.25
22 23 4.957296 TCTCCACAAGAAAGAAGTGTACC 58.043 43.478 0.00 0.00 0.00 3.34
23 24 5.844004 TCTCTCCACAAGAAAGAAGTGTAC 58.156 41.667 0.00 0.00 32.23 2.90
24 25 5.509840 GCTCTCTCCACAAGAAAGAAGTGTA 60.510 44.000 0.00 0.00 32.23 2.90
25 26 4.742138 GCTCTCTCCACAAGAAAGAAGTGT 60.742 45.833 0.00 0.00 32.23 3.55
26 27 3.745458 GCTCTCTCCACAAGAAAGAAGTG 59.255 47.826 0.00 0.00 32.23 3.16
27 28 3.244387 GGCTCTCTCCACAAGAAAGAAGT 60.244 47.826 0.00 0.00 32.23 3.01
28 29 3.244353 TGGCTCTCTCCACAAGAAAGAAG 60.244 47.826 0.00 0.00 32.23 2.85
29 30 2.705658 TGGCTCTCTCCACAAGAAAGAA 59.294 45.455 0.00 0.00 32.23 2.52
30 31 2.329267 TGGCTCTCTCCACAAGAAAGA 58.671 47.619 0.00 0.00 32.23 2.52
31 32 2.810852 GTTGGCTCTCTCCACAAGAAAG 59.189 50.000 0.00 0.00 35.50 2.62
32 33 2.806745 CGTTGGCTCTCTCCACAAGAAA 60.807 50.000 0.00 0.00 35.50 2.52
33 34 1.270305 CGTTGGCTCTCTCCACAAGAA 60.270 52.381 0.00 0.00 35.50 2.52
34 35 0.318441 CGTTGGCTCTCTCCACAAGA 59.682 55.000 0.00 0.00 35.50 3.02
35 36 0.671781 CCGTTGGCTCTCTCCACAAG 60.672 60.000 0.00 0.00 35.50 3.16
36 37 1.371183 CCGTTGGCTCTCTCCACAA 59.629 57.895 0.00 0.00 35.50 3.33
37 38 3.059982 CCGTTGGCTCTCTCCACA 58.940 61.111 0.00 0.00 35.50 4.17
38 39 2.435059 GCCGTTGGCTCTCTCCAC 60.435 66.667 0.00 0.00 46.69 4.02
50 51 3.802418 AAACGTCGCTCCAGCCGTT 62.802 57.895 9.07 9.07 45.70 4.44
51 52 4.295119 AAACGTCGCTCCAGCCGT 62.295 61.111 0.00 0.00 39.81 5.68
52 53 3.777925 CAAACGTCGCTCCAGCCG 61.778 66.667 0.00 0.00 37.91 5.52
53 54 2.357034 TCAAACGTCGCTCCAGCC 60.357 61.111 0.00 0.00 37.91 4.85
54 55 2.668280 GGTCAAACGTCGCTCCAGC 61.668 63.158 0.00 0.00 37.78 4.85
55 56 2.027625 GGGTCAAACGTCGCTCCAG 61.028 63.158 0.00 0.00 0.00 3.86
56 57 2.029964 GGGTCAAACGTCGCTCCA 59.970 61.111 0.00 0.00 0.00 3.86
57 58 3.110178 CGGGTCAAACGTCGCTCC 61.110 66.667 0.00 0.00 0.00 4.70
58 59 3.774702 GCGGGTCAAACGTCGCTC 61.775 66.667 9.49 0.00 44.10 5.03
62 63 4.072088 CAGCGCGGGTCAAACGTC 62.072 66.667 8.83 0.00 0.00 4.34
65 66 1.862602 AATTCCAGCGCGGGTCAAAC 61.863 55.000 26.04 0.00 34.36 2.93
66 67 1.175983 AAATTCCAGCGCGGGTCAAA 61.176 50.000 26.04 13.80 34.36 2.69
67 68 1.175983 AAAATTCCAGCGCGGGTCAA 61.176 50.000 26.04 14.55 34.36 3.18
68 69 1.175983 AAAAATTCCAGCGCGGGTCA 61.176 50.000 26.04 14.53 34.36 4.02
69 70 0.456142 GAAAAATTCCAGCGCGGGTC 60.456 55.000 26.04 11.48 34.36 4.46
70 71 0.893727 AGAAAAATTCCAGCGCGGGT 60.894 50.000 26.04 5.57 34.36 5.28
71 72 1.064060 CTAGAAAAATTCCAGCGCGGG 59.936 52.381 21.57 21.57 34.36 6.13
72 73 2.006888 TCTAGAAAAATTCCAGCGCGG 58.993 47.619 8.83 11.37 0.00 6.46
73 74 3.309682 TCATCTAGAAAAATTCCAGCGCG 59.690 43.478 0.00 0.00 0.00 6.86
74 75 4.882671 TCATCTAGAAAAATTCCAGCGC 57.117 40.909 0.00 0.00 0.00 5.92
85 86 4.012374 CTGCCCTGCTTTTCATCTAGAAA 58.988 43.478 0.00 0.00 44.21 2.52
86 87 3.614092 CTGCCCTGCTTTTCATCTAGAA 58.386 45.455 0.00 0.00 0.00 2.10
87 88 2.092753 CCTGCCCTGCTTTTCATCTAGA 60.093 50.000 0.00 0.00 0.00 2.43
88 89 2.295885 CCTGCCCTGCTTTTCATCTAG 58.704 52.381 0.00 0.00 0.00 2.43
89 90 1.064463 CCCTGCCCTGCTTTTCATCTA 60.064 52.381 0.00 0.00 0.00 1.98
90 91 0.324091 CCCTGCCCTGCTTTTCATCT 60.324 55.000 0.00 0.00 0.00 2.90
91 92 1.325476 CCCCTGCCCTGCTTTTCATC 61.325 60.000 0.00 0.00 0.00 2.92
92 93 1.305549 CCCCTGCCCTGCTTTTCAT 60.306 57.895 0.00 0.00 0.00 2.57
93 94 2.118076 CCCCTGCCCTGCTTTTCA 59.882 61.111 0.00 0.00 0.00 2.69
94 95 2.681421 CCCCCTGCCCTGCTTTTC 60.681 66.667 0.00 0.00 0.00 2.29
95 96 3.192630 TCCCCCTGCCCTGCTTTT 61.193 61.111 0.00 0.00 0.00 2.27
96 97 3.665971 CTCCCCCTGCCCTGCTTT 61.666 66.667 0.00 0.00 0.00 3.51
105 106 4.641645 TGCGTTGTGCTCCCCCTG 62.642 66.667 0.00 0.00 46.63 4.45
106 107 4.335647 CTGCGTTGTGCTCCCCCT 62.336 66.667 0.00 0.00 46.63 4.79
108 109 3.842925 TTCCTGCGTTGTGCTCCCC 62.843 63.158 0.00 0.00 46.63 4.81
109 110 2.281484 TTCCTGCGTTGTGCTCCC 60.281 61.111 0.00 0.00 46.63 4.30
110 111 2.970974 GCTTCCTGCGTTGTGCTCC 61.971 63.158 0.00 0.00 46.63 4.70
111 112 2.180131 CTGCTTCCTGCGTTGTGCTC 62.180 60.000 0.00 0.00 46.63 4.26
112 113 2.203195 TGCTTCCTGCGTTGTGCT 60.203 55.556 0.00 0.00 46.63 4.40
113 114 2.253452 CTGCTTCCTGCGTTGTGC 59.747 61.111 0.00 0.00 46.63 4.57
114 115 0.957395 ATCCTGCTTCCTGCGTTGTG 60.957 55.000 0.00 0.00 46.63 3.33
115 116 0.957395 CATCCTGCTTCCTGCGTTGT 60.957 55.000 0.00 0.00 46.63 3.32
116 117 0.674581 TCATCCTGCTTCCTGCGTTG 60.675 55.000 0.00 0.00 46.63 4.10
117 118 0.392193 CTCATCCTGCTTCCTGCGTT 60.392 55.000 0.00 0.00 46.63 4.84
118 119 1.220206 CTCATCCTGCTTCCTGCGT 59.780 57.895 0.00 0.00 46.63 5.24
119 120 0.392193 AACTCATCCTGCTTCCTGCG 60.392 55.000 0.00 0.00 46.63 5.18
120 121 2.698855 TAACTCATCCTGCTTCCTGC 57.301 50.000 0.00 0.00 43.25 4.85
121 122 3.068732 TCGATAACTCATCCTGCTTCCTG 59.931 47.826 0.00 0.00 0.00 3.86
122 123 3.300388 TCGATAACTCATCCTGCTTCCT 58.700 45.455 0.00 0.00 0.00 3.36
123 124 3.735237 TCGATAACTCATCCTGCTTCC 57.265 47.619 0.00 0.00 0.00 3.46
124 125 4.241681 GGATCGATAACTCATCCTGCTTC 58.758 47.826 0.00 0.00 34.31 3.86
125 126 3.643320 TGGATCGATAACTCATCCTGCTT 59.357 43.478 0.00 0.00 37.56 3.91
126 127 3.234353 TGGATCGATAACTCATCCTGCT 58.766 45.455 0.00 0.00 37.56 4.24
127 128 3.667497 TGGATCGATAACTCATCCTGC 57.333 47.619 0.00 0.00 37.56 4.85
128 129 3.983988 CGTTGGATCGATAACTCATCCTG 59.016 47.826 0.00 0.00 37.56 3.86
129 130 3.005897 CCGTTGGATCGATAACTCATCCT 59.994 47.826 0.00 0.00 37.56 3.24
130 131 3.318017 CCGTTGGATCGATAACTCATCC 58.682 50.000 0.00 0.00 37.24 3.51
131 132 2.731976 GCCGTTGGATCGATAACTCATC 59.268 50.000 0.00 0.00 0.00 2.92
132 133 2.755650 GCCGTTGGATCGATAACTCAT 58.244 47.619 0.00 0.00 0.00 2.90
133 134 1.535226 CGCCGTTGGATCGATAACTCA 60.535 52.381 0.00 0.00 0.00 3.41
134 135 1.129326 CGCCGTTGGATCGATAACTC 58.871 55.000 0.00 0.00 0.00 3.01
135 136 0.249322 CCGCCGTTGGATCGATAACT 60.249 55.000 0.00 0.00 0.00 2.24
136 137 0.249155 TCCGCCGTTGGATCGATAAC 60.249 55.000 0.00 0.00 31.53 1.89
137 138 0.677288 ATCCGCCGTTGGATCGATAA 59.323 50.000 0.00 0.00 45.80 1.75
138 139 0.038618 CATCCGCCGTTGGATCGATA 60.039 55.000 0.00 0.00 45.80 2.92
139 140 1.300931 CATCCGCCGTTGGATCGAT 60.301 57.895 0.00 0.00 45.80 3.59
140 141 2.106131 CATCCGCCGTTGGATCGA 59.894 61.111 2.85 0.00 45.80 3.59
141 142 2.202878 ACATCCGCCGTTGGATCG 60.203 61.111 2.85 2.94 45.80 3.69
142 143 1.429148 GACACATCCGCCGTTGGATC 61.429 60.000 2.85 0.00 45.80 3.36
144 145 2.047655 GACACATCCGCCGTTGGA 60.048 61.111 0.00 0.00 43.58 3.53
145 146 2.358125 TGACACATCCGCCGTTGG 60.358 61.111 0.00 0.00 0.00 3.77
146 147 0.389296 TAGTGACACATCCGCCGTTG 60.389 55.000 8.59 0.00 0.00 4.10
147 148 0.535335 ATAGTGACACATCCGCCGTT 59.465 50.000 8.59 0.00 0.00 4.44
148 149 0.535335 AATAGTGACACATCCGCCGT 59.465 50.000 8.59 0.00 0.00 5.68
149 150 0.930310 CAATAGTGACACATCCGCCG 59.070 55.000 8.59 0.00 0.00 6.46
150 151 2.309528 TCAATAGTGACACATCCGCC 57.690 50.000 8.59 0.00 0.00 6.13
151 152 2.029244 CGTTCAATAGTGACACATCCGC 59.971 50.000 8.59 0.00 31.90 5.54
152 153 2.603110 CCGTTCAATAGTGACACATCCG 59.397 50.000 8.59 0.26 31.90 4.18
153 154 3.370978 CACCGTTCAATAGTGACACATCC 59.629 47.826 8.59 0.00 31.90 3.51
154 155 3.181520 GCACCGTTCAATAGTGACACATC 60.182 47.826 8.59 0.00 31.90 3.06
155 156 2.742053 GCACCGTTCAATAGTGACACAT 59.258 45.455 8.59 0.00 31.90 3.21
156 157 2.139917 GCACCGTTCAATAGTGACACA 58.860 47.619 8.59 0.00 31.90 3.72
157 158 1.126113 CGCACCGTTCAATAGTGACAC 59.874 52.381 0.00 0.00 31.90 3.67
158 159 1.424403 CGCACCGTTCAATAGTGACA 58.576 50.000 0.00 0.00 31.90 3.58
159 160 0.719465 CCGCACCGTTCAATAGTGAC 59.281 55.000 0.00 0.00 31.90 3.67
160 161 0.390603 CCCGCACCGTTCAATAGTGA 60.391 55.000 0.00 0.00 33.21 3.41
161 162 0.390603 TCCCGCACCGTTCAATAGTG 60.391 55.000 0.00 0.00 34.58 2.74
162 163 0.108329 CTCCCGCACCGTTCAATAGT 60.108 55.000 0.00 0.00 0.00 2.12
163 164 0.810031 CCTCCCGCACCGTTCAATAG 60.810 60.000 0.00 0.00 0.00 1.73
164 165 1.219664 CCTCCCGCACCGTTCAATA 59.780 57.895 0.00 0.00 0.00 1.90
165 166 2.046314 CCTCCCGCACCGTTCAAT 60.046 61.111 0.00 0.00 0.00 2.57
173 174 4.547367 ATAAGCCGCCTCCCGCAC 62.547 66.667 0.00 0.00 37.30 5.34
174 175 4.545706 CATAAGCCGCCTCCCGCA 62.546 66.667 0.00 0.00 37.30 5.69
175 176 4.547367 ACATAAGCCGCCTCCCGC 62.547 66.667 0.00 0.00 35.03 6.13
176 177 1.029947 AAAACATAAGCCGCCTCCCG 61.030 55.000 0.00 0.00 0.00 5.14
177 178 1.134367 GAAAAACATAAGCCGCCTCCC 59.866 52.381 0.00 0.00 0.00 4.30
178 179 1.134367 GGAAAAACATAAGCCGCCTCC 59.866 52.381 0.00 0.00 0.00 4.30
179 180 2.092323 AGGAAAAACATAAGCCGCCTC 58.908 47.619 0.00 0.00 0.00 4.70
180 181 2.215942 AGGAAAAACATAAGCCGCCT 57.784 45.000 0.00 0.00 0.00 5.52
181 182 4.443913 TTTAGGAAAAACATAAGCCGCC 57.556 40.909 0.00 0.00 0.00 6.13
182 183 6.096695 TGATTTTAGGAAAAACATAAGCCGC 58.903 36.000 0.00 0.00 37.41 6.53
183 184 7.484959 GTCTGATTTTAGGAAAAACATAAGCCG 59.515 37.037 0.00 0.00 37.41 5.52
184 185 7.484959 CGTCTGATTTTAGGAAAAACATAAGCC 59.515 37.037 0.00 0.00 37.41 4.35
185 186 7.484959 CCGTCTGATTTTAGGAAAAACATAAGC 59.515 37.037 0.00 0.00 37.41 3.09
186 187 8.726988 TCCGTCTGATTTTAGGAAAAACATAAG 58.273 33.333 0.00 0.00 37.41 1.73
187 188 8.624367 TCCGTCTGATTTTAGGAAAAACATAA 57.376 30.769 0.00 0.00 37.41 1.90
188 189 8.673711 CATCCGTCTGATTTTAGGAAAAACATA 58.326 33.333 0.00 0.00 37.41 2.29
189 190 7.393234 TCATCCGTCTGATTTTAGGAAAAACAT 59.607 33.333 0.00 0.00 37.41 2.71
190 191 6.712998 TCATCCGTCTGATTTTAGGAAAAACA 59.287 34.615 0.00 0.00 37.41 2.83
191 192 7.141100 TCATCCGTCTGATTTTAGGAAAAAC 57.859 36.000 0.00 0.00 37.41 2.43
192 193 7.628366 GCATCATCCGTCTGATTTTAGGAAAAA 60.628 37.037 0.00 0.00 38.87 1.94
193 194 6.183360 GCATCATCCGTCTGATTTTAGGAAAA 60.183 38.462 0.00 0.00 33.59 2.29
194 195 5.296780 GCATCATCCGTCTGATTTTAGGAAA 59.703 40.000 0.00 0.00 33.59 3.13
195 196 4.816385 GCATCATCCGTCTGATTTTAGGAA 59.184 41.667 0.00 0.00 33.59 3.36
196 197 4.101585 AGCATCATCCGTCTGATTTTAGGA 59.898 41.667 0.00 0.00 33.59 2.94
197 198 4.384056 AGCATCATCCGTCTGATTTTAGG 58.616 43.478 0.00 0.00 33.59 2.69
198 199 5.998454 AAGCATCATCCGTCTGATTTTAG 57.002 39.130 0.00 0.00 33.59 1.85
199 200 5.466728 GCTAAGCATCATCCGTCTGATTTTA 59.533 40.000 0.00 0.00 33.59 1.52
200 201 4.274459 GCTAAGCATCATCCGTCTGATTTT 59.726 41.667 0.00 0.00 33.59 1.82
201 202 3.812053 GCTAAGCATCATCCGTCTGATTT 59.188 43.478 0.00 0.00 33.59 2.17
202 203 3.181462 TGCTAAGCATCATCCGTCTGATT 60.181 43.478 0.00 0.00 33.59 2.57
203 204 2.366590 TGCTAAGCATCATCCGTCTGAT 59.633 45.455 0.00 0.00 36.29 2.90
204 205 1.756538 TGCTAAGCATCATCCGTCTGA 59.243 47.619 0.00 0.00 31.71 3.27
205 206 2.229675 TGCTAAGCATCATCCGTCTG 57.770 50.000 0.00 0.00 31.71 3.51
206 207 2.831333 CTTGCTAAGCATCATCCGTCT 58.169 47.619 0.00 0.00 38.76 4.18
234 235 9.859427 CAAAATTGCAGTAGAATCATCCTAAAA 57.141 29.630 0.00 0.00 0.00 1.52
235 236 8.469200 CCAAAATTGCAGTAGAATCATCCTAAA 58.531 33.333 0.00 0.00 0.00 1.85
236 237 7.615365 ACCAAAATTGCAGTAGAATCATCCTAA 59.385 33.333 0.00 0.00 0.00 2.69
237 238 7.118723 ACCAAAATTGCAGTAGAATCATCCTA 58.881 34.615 0.00 0.00 0.00 2.94
238 239 5.954150 ACCAAAATTGCAGTAGAATCATCCT 59.046 36.000 0.00 0.00 0.00 3.24
239 240 6.212888 ACCAAAATTGCAGTAGAATCATCC 57.787 37.500 0.00 0.00 0.00 3.51
240 241 8.408601 ACATACCAAAATTGCAGTAGAATCATC 58.591 33.333 0.00 0.00 0.00 2.92
241 242 8.297470 ACATACCAAAATTGCAGTAGAATCAT 57.703 30.769 0.00 0.00 0.00 2.45
242 243 7.701539 ACATACCAAAATTGCAGTAGAATCA 57.298 32.000 0.00 0.00 0.00 2.57
243 244 8.673711 TGTACATACCAAAATTGCAGTAGAATC 58.326 33.333 0.00 0.00 0.00 2.52
244 245 8.574251 TGTACATACCAAAATTGCAGTAGAAT 57.426 30.769 0.00 0.00 0.00 2.40
245 246 7.987750 TGTACATACCAAAATTGCAGTAGAA 57.012 32.000 0.00 0.00 0.00 2.10
246 247 7.987750 TTGTACATACCAAAATTGCAGTAGA 57.012 32.000 0.00 0.00 0.00 2.59
279 280 9.571816 ACCATCCATTTTGATTTTGTTGTTAAT 57.428 25.926 0.00 0.00 0.00 1.40
280 281 8.970859 ACCATCCATTTTGATTTTGTTGTTAA 57.029 26.923 0.00 0.00 0.00 2.01
282 283 8.970859 TTACCATCCATTTTGATTTTGTTGTT 57.029 26.923 0.00 0.00 0.00 2.83
283 284 8.970859 TTTACCATCCATTTTGATTTTGTTGT 57.029 26.923 0.00 0.00 0.00 3.32
292 293 9.211410 ACCATCATAATTTACCATCCATTTTGA 57.789 29.630 0.00 0.00 0.00 2.69
293 294 9.835389 AACCATCATAATTTACCATCCATTTTG 57.165 29.630 0.00 0.00 0.00 2.44
324 325 1.886886 TTTGCAACGAAGGGAGTACC 58.113 50.000 0.00 0.00 40.67 3.34
325 326 2.418976 GGATTTGCAACGAAGGGAGTAC 59.581 50.000 0.00 0.00 0.00 2.73
326 327 2.304761 AGGATTTGCAACGAAGGGAGTA 59.695 45.455 0.00 0.00 0.00 2.59
327 328 1.073923 AGGATTTGCAACGAAGGGAGT 59.926 47.619 0.00 0.00 0.00 3.85
328 329 1.470098 CAGGATTTGCAACGAAGGGAG 59.530 52.381 0.00 0.00 0.00 4.30
329 330 1.202879 ACAGGATTTGCAACGAAGGGA 60.203 47.619 0.00 0.00 0.00 4.20
330 331 1.068333 CACAGGATTTGCAACGAAGGG 60.068 52.381 0.00 0.00 0.00 3.95
331 332 1.879380 TCACAGGATTTGCAACGAAGG 59.121 47.619 0.00 0.00 0.00 3.46
332 333 3.426695 GGATCACAGGATTTGCAACGAAG 60.427 47.826 0.00 0.00 32.67 3.79
333 334 2.487762 GGATCACAGGATTTGCAACGAA 59.512 45.455 0.00 0.00 32.67 3.85
334 335 2.083774 GGATCACAGGATTTGCAACGA 58.916 47.619 0.00 0.00 32.67 3.85
335 336 1.811965 TGGATCACAGGATTTGCAACG 59.188 47.619 0.00 0.00 32.67 4.10
336 337 3.940209 TTGGATCACAGGATTTGCAAC 57.060 42.857 0.00 0.00 32.67 4.17
337 338 4.151121 TCTTTGGATCACAGGATTTGCAA 58.849 39.130 0.00 0.00 32.67 4.08
338 339 3.765381 TCTTTGGATCACAGGATTTGCA 58.235 40.909 0.00 0.00 32.67 4.08
339 340 4.741342 CTTCTTTGGATCACAGGATTTGC 58.259 43.478 0.00 0.00 32.67 3.68
340 341 4.381292 GGCTTCTTTGGATCACAGGATTTG 60.381 45.833 0.00 0.00 32.67 2.32
341 342 3.766051 GGCTTCTTTGGATCACAGGATTT 59.234 43.478 0.00 0.00 32.67 2.17
342 343 3.359950 GGCTTCTTTGGATCACAGGATT 58.640 45.455 0.00 0.00 32.67 3.01
343 344 2.357569 GGGCTTCTTTGGATCACAGGAT 60.358 50.000 0.00 0.00 36.13 3.24
344 345 1.004745 GGGCTTCTTTGGATCACAGGA 59.995 52.381 0.00 0.00 0.00 3.86
345 346 1.005215 AGGGCTTCTTTGGATCACAGG 59.995 52.381 0.00 0.00 0.00 4.00
346 347 2.503895 AGGGCTTCTTTGGATCACAG 57.496 50.000 0.00 0.00 0.00 3.66
347 348 4.380843 TTTAGGGCTTCTTTGGATCACA 57.619 40.909 0.00 0.00 0.00 3.58
348 349 5.196695 AGATTTAGGGCTTCTTTGGATCAC 58.803 41.667 0.00 0.00 0.00 3.06
349 350 5.456921 AGATTTAGGGCTTCTTTGGATCA 57.543 39.130 0.00 0.00 0.00 2.92
350 351 6.567959 CAAAGATTTAGGGCTTCTTTGGATC 58.432 40.000 13.99 0.00 46.40 3.36
351 352 6.535963 CAAAGATTTAGGGCTTCTTTGGAT 57.464 37.500 13.99 0.00 46.40 3.41
352 353 5.982890 CAAAGATTTAGGGCTTCTTTGGA 57.017 39.130 13.99 0.00 46.40 3.53
355 356 6.326323 TGTTTCCAAAGATTTAGGGCTTCTTT 59.674 34.615 0.00 0.00 39.61 2.52
356 357 5.838521 TGTTTCCAAAGATTTAGGGCTTCTT 59.161 36.000 0.00 0.00 0.00 2.52
357 358 5.393866 TGTTTCCAAAGATTTAGGGCTTCT 58.606 37.500 0.00 0.00 0.00 2.85
358 359 5.722021 TGTTTCCAAAGATTTAGGGCTTC 57.278 39.130 0.00 0.00 0.00 3.86
359 360 6.686484 AATGTTTCCAAAGATTTAGGGCTT 57.314 33.333 0.00 0.00 28.67 4.35
360 361 6.269769 TGAAATGTTTCCAAAGATTTAGGGCT 59.730 34.615 7.04 0.00 40.57 5.19
361 362 6.368791 GTGAAATGTTTCCAAAGATTTAGGGC 59.631 38.462 7.04 0.00 40.57 5.19
362 363 7.670364 AGTGAAATGTTTCCAAAGATTTAGGG 58.330 34.615 7.04 0.00 40.57 3.53
369 370 9.076781 TGATTCATAGTGAAATGTTTCCAAAGA 57.923 29.630 3.26 0.00 40.12 2.52
370 371 9.132521 GTGATTCATAGTGAAATGTTTCCAAAG 57.867 33.333 3.26 0.00 40.12 2.77
371 372 8.637099 TGTGATTCATAGTGAAATGTTTCCAAA 58.363 29.630 3.26 0.00 40.12 3.28
372 373 8.175925 TGTGATTCATAGTGAAATGTTTCCAA 57.824 30.769 3.26 0.00 40.12 3.53
373 374 7.757941 TGTGATTCATAGTGAAATGTTTCCA 57.242 32.000 3.26 0.00 40.12 3.53
374 375 9.722056 GTATGTGATTCATAGTGAAATGTTTCC 57.278 33.333 3.26 0.00 40.12 3.13
375 376 9.425893 CGTATGTGATTCATAGTGAAATGTTTC 57.574 33.333 0.00 0.00 40.12 2.78
376 377 9.161629 TCGTATGTGATTCATAGTGAAATGTTT 57.838 29.630 0.00 0.00 40.12 2.83
377 378 8.716646 TCGTATGTGATTCATAGTGAAATGTT 57.283 30.769 0.00 0.00 40.12 2.71
378 379 8.716646 TTCGTATGTGATTCATAGTGAAATGT 57.283 30.769 0.00 0.00 40.12 2.71
379 380 8.820933 ACTTCGTATGTGATTCATAGTGAAATG 58.179 33.333 0.00 0.00 40.12 2.32
380 381 8.948631 ACTTCGTATGTGATTCATAGTGAAAT 57.051 30.769 0.00 0.00 40.12 2.17
381 382 9.863845 TTACTTCGTATGTGATTCATAGTGAAA 57.136 29.630 0.00 0.00 40.12 2.69
382 383 9.863845 TTTACTTCGTATGTGATTCATAGTGAA 57.136 29.630 0.00 0.00 41.09 3.18
383 384 9.863845 TTTTACTTCGTATGTGATTCATAGTGA 57.136 29.630 0.00 0.00 39.36 3.41
438 439 9.725019 CACTATGAACCACATACCAATGTATAT 57.275 33.333 0.00 0.00 44.70 0.86
439 440 8.929487 TCACTATGAACCACATACCAATGTATA 58.071 33.333 0.00 0.00 44.70 1.47
440 441 7.801104 TCACTATGAACCACATACCAATGTAT 58.199 34.615 0.00 0.00 44.70 2.29
441 442 7.189079 TCACTATGAACCACATACCAATGTA 57.811 36.000 0.00 0.00 44.70 2.29
442 443 6.480763 TTCACTATGAACCACATACCAATGT 58.519 36.000 0.00 0.00 37.91 2.71
443 444 7.389803 TTTCACTATGAACCACATACCAATG 57.610 36.000 0.00 0.00 35.89 2.82
444 445 8.055181 AGATTTCACTATGAACCACATACCAAT 58.945 33.333 0.00 0.00 35.89 3.16
445 446 7.402054 AGATTTCACTATGAACCACATACCAA 58.598 34.615 0.00 0.00 35.89 3.67
446 447 6.957631 AGATTTCACTATGAACCACATACCA 58.042 36.000 0.00 0.00 35.89 3.25
447 448 7.275920 AGAGATTTCACTATGAACCACATACC 58.724 38.462 0.00 0.00 35.89 2.73
448 449 9.250624 GTAGAGATTTCACTATGAACCACATAC 57.749 37.037 0.00 0.00 35.89 2.39
449 450 8.135529 CGTAGAGATTTCACTATGAACCACATA 58.864 37.037 0.00 0.00 35.89 2.29
450 451 6.980978 CGTAGAGATTTCACTATGAACCACAT 59.019 38.462 0.00 0.00 35.89 3.21
451 452 6.152154 TCGTAGAGATTTCACTATGAACCACA 59.848 38.462 4.96 0.00 35.89 4.17
452 453 6.561614 TCGTAGAGATTTCACTATGAACCAC 58.438 40.000 4.96 0.00 35.89 4.16
453 454 6.769134 TCGTAGAGATTTCACTATGAACCA 57.231 37.500 4.96 0.00 35.89 3.67
456 457 7.827701 AGTGTTCGTAGAGATTTCACTATGAA 58.172 34.615 12.69 12.69 40.33 2.57
457 458 7.392494 AGTGTTCGTAGAGATTTCACTATGA 57.608 36.000 3.68 3.68 38.43 2.15
458 459 9.737427 ATAAGTGTTCGTAGAGATTTCACTATG 57.263 33.333 0.00 0.00 38.43 2.23
469 470 9.460906 GGTTCCTAAATATAAGTGTTCGTAGAG 57.539 37.037 0.00 0.00 38.43 2.43
470 471 8.131100 CGGTTCCTAAATATAAGTGTTCGTAGA 58.869 37.037 0.00 0.00 0.00 2.59
471 472 8.131100 TCGGTTCCTAAATATAAGTGTTCGTAG 58.869 37.037 0.00 0.00 0.00 3.51
472 473 7.995289 TCGGTTCCTAAATATAAGTGTTCGTA 58.005 34.615 0.00 0.00 0.00 3.43
473 474 6.866480 TCGGTTCCTAAATATAAGTGTTCGT 58.134 36.000 0.00 0.00 0.00 3.85
474 475 6.420008 CCTCGGTTCCTAAATATAAGTGTTCG 59.580 42.308 0.00 0.00 0.00 3.95
475 476 6.704937 CCCTCGGTTCCTAAATATAAGTGTTC 59.295 42.308 0.00 0.00 0.00 3.18
476 477 6.384886 TCCCTCGGTTCCTAAATATAAGTGTT 59.615 38.462 0.00 0.00 0.00 3.32
477 478 5.901276 TCCCTCGGTTCCTAAATATAAGTGT 59.099 40.000 0.00 0.00 0.00 3.55
478 479 6.041751 ACTCCCTCGGTTCCTAAATATAAGTG 59.958 42.308 0.00 0.00 0.00 3.16
479 480 6.141790 ACTCCCTCGGTTCCTAAATATAAGT 58.858 40.000 0.00 0.00 0.00 2.24
480 481 6.667558 ACTCCCTCGGTTCCTAAATATAAG 57.332 41.667 0.00 0.00 0.00 1.73
481 482 7.951806 TCATACTCCCTCGGTTCCTAAATATAA 59.048 37.037 0.00 0.00 0.00 0.98
482 483 7.472741 TCATACTCCCTCGGTTCCTAAATATA 58.527 38.462 0.00 0.00 0.00 0.86
483 484 6.320518 TCATACTCCCTCGGTTCCTAAATAT 58.679 40.000 0.00 0.00 0.00 1.28
484 485 5.708544 TCATACTCCCTCGGTTCCTAAATA 58.291 41.667 0.00 0.00 0.00 1.40
485 486 4.553678 TCATACTCCCTCGGTTCCTAAAT 58.446 43.478 0.00 0.00 0.00 1.40
486 487 3.985127 TCATACTCCCTCGGTTCCTAAA 58.015 45.455 0.00 0.00 0.00 1.85
487 488 3.675348 TCATACTCCCTCGGTTCCTAA 57.325 47.619 0.00 0.00 0.00 2.69
488 489 3.675348 TTCATACTCCCTCGGTTCCTA 57.325 47.619 0.00 0.00 0.00 2.94
489 490 2.544844 TTCATACTCCCTCGGTTCCT 57.455 50.000 0.00 0.00 0.00 3.36
490 491 3.840124 ATTTCATACTCCCTCGGTTCC 57.160 47.619 0.00 0.00 0.00 3.62
491 492 7.803279 AAAATATTTCATACTCCCTCGGTTC 57.197 36.000 0.10 0.00 0.00 3.62
492 493 9.117183 GTAAAAATATTTCATACTCCCTCGGTT 57.883 33.333 0.10 0.00 0.00 4.44
493 494 7.718314 GGTAAAAATATTTCATACTCCCTCGGT 59.282 37.037 17.10 0.00 0.00 4.69
494 495 7.174426 GGGTAAAAATATTTCATACTCCCTCGG 59.826 40.741 17.10 0.00 0.00 4.63
495 496 7.937394 AGGGTAAAAATATTTCATACTCCCTCG 59.063 37.037 15.33 0.00 0.00 4.63
505 506 9.702253 TGGCTACAATAGGGTAAAAATATTTCA 57.298 29.630 0.10 0.00 0.00 2.69
508 509 9.088987 CCATGGCTACAATAGGGTAAAAATATT 57.911 33.333 0.00 0.00 0.00 1.28
509 510 7.673926 CCCATGGCTACAATAGGGTAAAAATAT 59.326 37.037 6.09 0.00 34.42 1.28
510 511 7.007723 CCCATGGCTACAATAGGGTAAAAATA 58.992 38.462 6.09 0.00 34.42 1.40
511 512 5.838521 CCCATGGCTACAATAGGGTAAAAAT 59.161 40.000 6.09 0.00 34.42 1.82
512 513 5.205056 CCCATGGCTACAATAGGGTAAAAA 58.795 41.667 6.09 0.00 34.42 1.94
513 514 4.798882 CCCATGGCTACAATAGGGTAAAA 58.201 43.478 6.09 0.00 34.42 1.52
514 515 3.435890 GCCCATGGCTACAATAGGGTAAA 60.436 47.826 6.09 0.00 46.69 2.01
515 516 2.107552 GCCCATGGCTACAATAGGGTAA 59.892 50.000 6.09 0.00 46.69 2.85
516 517 1.702957 GCCCATGGCTACAATAGGGTA 59.297 52.381 6.09 0.00 46.69 3.69
517 518 0.478507 GCCCATGGCTACAATAGGGT 59.521 55.000 6.09 0.00 46.69 4.34
518 519 3.346426 GCCCATGGCTACAATAGGG 57.654 57.895 6.09 0.00 46.69 3.53
542 543 1.971695 GGCAAGTTCTCCCAACCCG 60.972 63.158 0.00 0.00 0.00 5.28
570 571 0.680280 TCTGGTAGTCTCGAGTGGGC 60.680 60.000 13.13 2.01 0.00 5.36
571 572 1.835494 TTCTGGTAGTCTCGAGTGGG 58.165 55.000 13.13 0.00 0.00 4.61
574 575 1.819903 GCCTTTCTGGTAGTCTCGAGT 59.180 52.381 13.13 0.00 38.35 4.18
592 595 2.436824 GAGGCGAGGGTTTCTGCC 60.437 66.667 0.00 0.00 42.23 4.85
593 596 2.436824 GGAGGCGAGGGTTTCTGC 60.437 66.667 0.00 0.00 0.00 4.26
594 597 0.462759 GATGGAGGCGAGGGTTTCTG 60.463 60.000 0.00 0.00 0.00 3.02
595 598 1.908483 GATGGAGGCGAGGGTTTCT 59.092 57.895 0.00 0.00 0.00 2.52
596 599 1.521681 CGATGGAGGCGAGGGTTTC 60.522 63.158 0.00 0.00 0.00 2.78
597 600 2.584608 CGATGGAGGCGAGGGTTT 59.415 61.111 0.00 0.00 0.00 3.27
598 601 4.162690 GCGATGGAGGCGAGGGTT 62.163 66.667 0.00 0.00 0.00 4.11
606 609 3.257561 CTTGTCGCGCGATGGAGG 61.258 66.667 37.03 18.84 0.00 4.30
697 700 2.125106 GAGGCACGCGGGATCTTT 60.125 61.111 15.48 0.00 0.00 2.52
725 728 0.951040 CCAGGGTTTGCAGACGACTC 60.951 60.000 0.70 0.00 0.00 3.36
942 945 2.725641 GGGTTTGTGGTGGCGAAC 59.274 61.111 0.00 0.00 33.21 3.95
1086 1089 3.114616 CAGTGGTCGCAGCCTTCG 61.115 66.667 0.00 0.00 0.00 3.79
1211 1214 0.543749 GGGGTGATGAAGAGAGGTGG 59.456 60.000 0.00 0.00 0.00 4.61
1455 1464 2.580815 CATGTCTCTGCGCCCTCA 59.419 61.111 4.18 0.00 0.00 3.86
1768 1778 4.809426 ACTTACGGCACAAAGTGATATAGC 59.191 41.667 0.58 0.00 33.71 2.97
1769 1779 6.018994 GGAACTTACGGCACAAAGTGATATAG 60.019 42.308 0.58 0.00 34.94 1.31
1849 1949 8.704849 ATAATAACCCATTAGCAGCATGTTTA 57.295 30.769 0.00 0.00 32.38 2.01
1853 1954 9.577110 CATTAATAATAACCCATTAGCAGCATG 57.423 33.333 0.00 0.00 32.61 4.06
1854 1955 9.312904 ACATTAATAATAACCCATTAGCAGCAT 57.687 29.630 0.00 0.00 32.61 3.79
2035 2463 1.291877 CCACCTTGACGAAGAAGCCG 61.292 60.000 0.00 0.00 0.00 5.52
2045 2474 3.065371 CACTTCAACAGTTCCACCTTGAC 59.935 47.826 0.00 0.00 30.92 3.18
2061 2490 9.990360 TGTATAAAATCACTACAAGTCACTTCA 57.010 29.630 0.00 0.00 0.00 3.02
2086 2517 3.501062 CAGAATGCACCACATAGGCTATG 59.499 47.826 28.48 28.48 43.14 2.23
2087 2518 3.497405 CCAGAATGCACCACATAGGCTAT 60.497 47.826 0.00 0.00 38.34 2.97
2095 2526 2.039613 TCATGTACCAGAATGCACCACA 59.960 45.455 0.00 0.00 31.97 4.17
2106 2537 8.249638 CAGATCCTATATGAAGTCATGTACCAG 58.750 40.741 4.00 0.00 37.15 4.00
2286 2721 3.906720 TCTATTTTGGAACGGAGGGAG 57.093 47.619 0.00 0.00 0.00 4.30
2287 2722 3.778075 TCATCTATTTTGGAACGGAGGGA 59.222 43.478 0.00 0.00 0.00 4.20
2288 2723 3.877508 GTCATCTATTTTGGAACGGAGGG 59.122 47.826 0.00 0.00 0.00 4.30
2289 2724 4.770795 AGTCATCTATTTTGGAACGGAGG 58.229 43.478 0.00 0.00 0.00 4.30
2290 2725 5.419542 TGAGTCATCTATTTTGGAACGGAG 58.580 41.667 0.00 0.00 0.00 4.63
2291 2726 5.414789 TGAGTCATCTATTTTGGAACGGA 57.585 39.130 0.00 0.00 0.00 4.69
2292 2727 5.643777 AGTTGAGTCATCTATTTTGGAACGG 59.356 40.000 1.70 0.00 0.00 4.44
2293 2728 6.727824 AGTTGAGTCATCTATTTTGGAACG 57.272 37.500 1.70 0.00 0.00 3.95
2294 2729 8.352942 ACAAAGTTGAGTCATCTATTTTGGAAC 58.647 33.333 14.35 0.00 40.00 3.62
2295 2730 8.463930 ACAAAGTTGAGTCATCTATTTTGGAA 57.536 30.769 14.35 0.00 40.00 3.53
2296 2731 8.999431 GTACAAAGTTGAGTCATCTATTTTGGA 58.001 33.333 14.35 6.88 40.00 3.53
2297 2732 9.003658 AGTACAAAGTTGAGTCATCTATTTTGG 57.996 33.333 14.35 0.00 40.00 3.28
2304 2739 9.915629 CTAAGTTAGTACAAAGTTGAGTCATCT 57.084 33.333 1.40 0.00 0.00 2.90
2305 2740 9.694137 ACTAAGTTAGTACAAAGTTGAGTCATC 57.306 33.333 14.00 0.00 37.23 2.92
2333 2768 9.833894 CGTTTCAAAATAAATGACTCAACTTTG 57.166 29.630 0.00 0.00 0.00 2.77
2334 2769 9.030301 CCGTTTCAAAATAAATGACTCAACTTT 57.970 29.630 0.00 0.00 0.00 2.66
2335 2770 8.410141 TCCGTTTCAAAATAAATGACTCAACTT 58.590 29.630 0.00 0.00 0.00 2.66
2336 2771 7.936584 TCCGTTTCAAAATAAATGACTCAACT 58.063 30.769 0.00 0.00 0.00 3.16
2337 2772 7.326063 CCTCCGTTTCAAAATAAATGACTCAAC 59.674 37.037 0.00 0.00 0.00 3.18
2338 2773 7.367285 CCTCCGTTTCAAAATAAATGACTCAA 58.633 34.615 0.00 0.00 0.00 3.02
2339 2774 6.072175 CCCTCCGTTTCAAAATAAATGACTCA 60.072 38.462 0.00 0.00 0.00 3.41
2340 2775 6.150474 TCCCTCCGTTTCAAAATAAATGACTC 59.850 38.462 0.00 0.00 0.00 3.36
2341 2776 6.007703 TCCCTCCGTTTCAAAATAAATGACT 58.992 36.000 0.00 0.00 0.00 3.41
2342 2777 6.072119 ACTCCCTCCGTTTCAAAATAAATGAC 60.072 38.462 0.00 0.00 0.00 3.06
2343 2778 6.007703 ACTCCCTCCGTTTCAAAATAAATGA 58.992 36.000 0.00 0.00 0.00 2.57
2344 2779 6.267496 ACTCCCTCCGTTTCAAAATAAATG 57.733 37.500 0.00 0.00 0.00 2.32
2345 2780 7.399634 TCTACTCCCTCCGTTTCAAAATAAAT 58.600 34.615 0.00 0.00 0.00 1.40
2346 2781 6.771573 TCTACTCCCTCCGTTTCAAAATAAA 58.228 36.000 0.00 0.00 0.00 1.40
2347 2782 6.363167 TCTACTCCCTCCGTTTCAAAATAA 57.637 37.500 0.00 0.00 0.00 1.40
2348 2783 6.346096 CATCTACTCCCTCCGTTTCAAAATA 58.654 40.000 0.00 0.00 0.00 1.40
2349 2784 4.903045 TCTACTCCCTCCGTTTCAAAAT 57.097 40.909 0.00 0.00 0.00 1.82
2350 2785 4.564821 CCATCTACTCCCTCCGTTTCAAAA 60.565 45.833 0.00 0.00 0.00 2.44
2351 2786 3.055385 CCATCTACTCCCTCCGTTTCAAA 60.055 47.826 0.00 0.00 0.00 2.69
2352 2787 2.500098 CCATCTACTCCCTCCGTTTCAA 59.500 50.000 0.00 0.00 0.00 2.69
2353 2788 2.108168 CCATCTACTCCCTCCGTTTCA 58.892 52.381 0.00 0.00 0.00 2.69
2354 2789 2.385803 TCCATCTACTCCCTCCGTTTC 58.614 52.381 0.00 0.00 0.00 2.78
2355 2790 2.544844 TCCATCTACTCCCTCCGTTT 57.455 50.000 0.00 0.00 0.00 3.60
2356 2791 2.777459 ATCCATCTACTCCCTCCGTT 57.223 50.000 0.00 0.00 0.00 4.44
2357 2792 2.445905 TGTATCCATCTACTCCCTCCGT 59.554 50.000 0.00 0.00 0.00 4.69
2358 2793 3.156288 TGTATCCATCTACTCCCTCCG 57.844 52.381 0.00 0.00 0.00 4.63
2359 2794 4.421131 ACATGTATCCATCTACTCCCTCC 58.579 47.826 0.00 0.00 0.00 4.30
2360 2795 6.249951 AGTACATGTATCCATCTACTCCCTC 58.750 44.000 9.18 0.00 29.81 4.30
2361 2796 6.220881 AGTACATGTATCCATCTACTCCCT 57.779 41.667 9.18 0.00 29.81 4.20
2362 2797 6.919775 AAGTACATGTATCCATCTACTCCC 57.080 41.667 9.18 0.00 33.30 4.30
2363 2798 6.647067 GCAAAGTACATGTATCCATCTACTCC 59.353 42.308 9.18 0.00 33.30 3.85
2364 2799 6.647067 GGCAAAGTACATGTATCCATCTACTC 59.353 42.308 9.18 0.00 33.30 2.59
2365 2800 6.525629 GGCAAAGTACATGTATCCATCTACT 58.474 40.000 9.18 0.00 35.18 2.57
2366 2801 5.405571 CGGCAAAGTACATGTATCCATCTAC 59.594 44.000 9.18 0.00 0.00 2.59
2367 2802 5.069914 ACGGCAAAGTACATGTATCCATCTA 59.930 40.000 9.18 0.00 0.00 1.98
2368 2803 4.141711 ACGGCAAAGTACATGTATCCATCT 60.142 41.667 9.18 0.00 0.00 2.90
2545 2982 8.483307 AAAGAAAATTATGTTGCCTGCAATAG 57.517 30.769 7.94 0.00 38.28 1.73
2622 3059 4.000325 TCATTGATTCGTAAGTGTGGTGG 59.000 43.478 0.00 0.00 39.48 4.61
2880 3331 8.744652 TGGTGTCTTGGGTATGTATTTATTTTG 58.255 33.333 0.00 0.00 0.00 2.44
2947 3398 0.505655 GCCGGCGATAATGTACGTTC 59.494 55.000 12.58 0.00 0.00 3.95
2957 3408 0.604511 TCGATAGAGTGCCGGCGATA 60.605 55.000 23.90 11.98 42.67 2.92


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.