Multiple sequence alignment - TraesCS2B01G276600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G276600 chr2B 100.000 2579 0 0 1 2579 382254287 382251709 0.000000e+00 4763
1 TraesCS2B01G276600 chr2B 94.633 1323 65 1 768 2084 381924686 381923364 0.000000e+00 2045
2 TraesCS2B01G276600 chr2B 97.342 301 8 0 2085 2385 382247049 382246749 1.770000e-141 512
3 TraesCS2B01G276600 chr2B 83.099 284 40 6 365 641 636877860 636877578 4.260000e-63 252
4 TraesCS2B01G276600 chr2D 93.553 2094 120 9 1 2084 314170540 314168452 0.000000e+00 3105
5 TraesCS2B01G276600 chr2A 91.859 1388 80 9 716 2084 421566264 421567637 0.000000e+00 1906
6 TraesCS2B01G276600 chr2A 89.804 1275 98 8 716 1971 421910757 421912018 0.000000e+00 1605
7 TraesCS2B01G276600 chr2A 97.321 112 3 0 1973 2084 421914707 421914818 9.420000e-45 191
8 TraesCS2B01G276600 chr4A 92.958 497 34 1 2084 2579 665923985 665923489 0.000000e+00 723
9 TraesCS2B01G276600 chr4A 95.695 302 12 1 2085 2385 665889379 665889680 3.860000e-133 484
10 TraesCS2B01G276600 chr6B 89.325 459 46 3 2085 2541 703236811 703237268 8.000000e-160 573
11 TraesCS2B01G276600 chr6B 86.720 497 51 6 2085 2579 703222098 703222581 2.920000e-149 538
12 TraesCS2B01G276600 chr3A 84.429 289 31 10 365 643 711256898 711256614 3.270000e-69 272
13 TraesCS2B01G276600 chr5D 84.155 284 36 8 365 641 498464858 498465139 1.520000e-67 267
14 TraesCS2B01G276600 chr5D 81.979 283 44 6 365 641 28992298 28992579 1.540000e-57 233
15 TraesCS2B01G276600 chr4D 86.864 236 30 1 365 600 414044209 414044443 1.970000e-66 263
16 TraesCS2B01G276600 chr4D 73.900 341 75 12 1 333 486398676 486399010 9.690000e-25 124
17 TraesCS2B01G276600 chr7A 85.532 235 32 2 365 598 510900974 510901207 7.130000e-61 244
18 TraesCS2B01G276600 chr5B 85.593 236 29 5 365 599 375796119 375795888 2.560000e-60 243
19 TraesCS2B01G276600 chr3D 82.578 287 39 7 365 641 47748387 47748672 2.560000e-60 243
20 TraesCS2B01G276600 chr4B 83.333 180 28 2 1 179 620940277 620940455 5.710000e-37 165


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G276600 chr2B 382251709 382254287 2578 True 4763 4763 100.0000 1 2579 1 chr2B.!!$R3 2578
1 TraesCS2B01G276600 chr2B 381923364 381924686 1322 True 2045 2045 94.6330 768 2084 1 chr2B.!!$R1 1316
2 TraesCS2B01G276600 chr2D 314168452 314170540 2088 True 3105 3105 93.5530 1 2084 1 chr2D.!!$R1 2083
3 TraesCS2B01G276600 chr2A 421566264 421567637 1373 False 1906 1906 91.8590 716 2084 1 chr2A.!!$F1 1368
4 TraesCS2B01G276600 chr2A 421910757 421914818 4061 False 898 1605 93.5625 716 2084 2 chr2A.!!$F2 1368

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
842 846 0.462047 CCAACTTATTCCTCGCGCCT 60.462 55.0 0.0 0.0 0.0 5.52 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2104 4813 0.034186 TCCGCCATGGAAGCTTGAAT 60.034 50.0 18.4 0.0 46.38 2.57 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
45 46 3.322514 GTGCTTGTGGCTAAGGACA 57.677 52.632 16.98 0.00 45.08 4.02
50 51 1.535462 CTTGTGGCTAAGGACAAACGG 59.465 52.381 0.00 0.00 31.83 4.44
76 78 2.507324 GCGGACGTGAGCCTTCTC 60.507 66.667 0.00 0.00 39.78 2.87
78 80 2.507324 GGACGTGAGCCTTCTCGC 60.507 66.667 0.00 0.00 42.40 5.03
127 129 2.361104 TGCCCCGAGTGCCATTTC 60.361 61.111 0.00 0.00 0.00 2.17
145 147 6.590357 CCATTTCGGTCGTAATTATGATGTC 58.410 40.000 10.52 3.80 0.00 3.06
152 154 7.040271 TCGGTCGTAATTATGATGTCCAATAGA 60.040 37.037 10.52 0.00 0.00 1.98
161 163 8.727100 TTATGATGTCCAATAGAGGTAGTCAT 57.273 34.615 0.00 0.00 32.76 3.06
198 202 0.980754 TAAGGGGCTCGCAGGAATCA 60.981 55.000 0.00 0.00 0.00 2.57
202 206 1.153086 GGCTCGCAGGAATCACCAT 60.153 57.895 0.00 0.00 42.04 3.55
220 224 4.385447 CACCATAATTGCCAAGTTTTGACG 59.615 41.667 0.00 0.00 0.00 4.35
222 226 4.621034 CCATAATTGCCAAGTTTTGACGAC 59.379 41.667 0.00 0.00 0.00 4.34
239 243 1.532437 CGACTCTGAAATGCACTGCAA 59.468 47.619 8.03 0.00 43.62 4.08
255 259 5.517770 GCACTGCAATTTTGGATGATTCTAC 59.482 40.000 0.00 0.00 0.00 2.59
259 263 6.990798 TGCAATTTTGGATGATTCTACACAA 58.009 32.000 0.00 0.00 0.00 3.33
270 274 8.522830 GGATGATTCTACACAATTCCTGAAAAA 58.477 33.333 0.00 0.00 0.00 1.94
328 332 8.674263 AGACCATGATTCTTCATAATTGAGTC 57.326 34.615 0.00 0.00 40.70 3.36
462 466 2.033550 CGAGGATTTCCCGACTGTCTAG 59.966 54.545 6.21 0.00 40.87 2.43
496 500 3.465403 CGGCTCTGGTGAGGGAGG 61.465 72.222 0.00 0.00 40.53 4.30
506 510 2.764128 GAGGGAGGGGCGATGACA 60.764 66.667 0.00 0.00 0.00 3.58
551 555 4.895224 AGTGATTGTAATCGTCGCTAGA 57.105 40.909 0.00 0.00 38.26 2.43
554 558 4.383052 GTGATTGTAATCGTCGCTAGATGG 59.617 45.833 0.00 0.00 38.26 3.51
559 563 1.399714 ATCGTCGCTAGATGGTCCAA 58.600 50.000 0.00 0.00 34.23 3.53
561 565 0.738975 CGTCGCTAGATGGTCCAAGA 59.261 55.000 0.00 0.00 0.00 3.02
570 574 6.293081 CGCTAGATGGTCCAAGAACATAATTG 60.293 42.308 0.00 0.00 40.37 2.32
573 577 7.865706 AGATGGTCCAAGAACATAATTGTAC 57.134 36.000 0.00 0.00 40.37 2.90
599 603 5.769484 TTATTGCCCGTTGTTGTTCTTTA 57.231 34.783 0.00 0.00 0.00 1.85
623 627 4.572389 CGCTGCCAAAGACTAATAGATTGT 59.428 41.667 0.00 0.00 0.00 2.71
672 676 3.668821 TGGAAGAGGACCCATATGTGAT 58.331 45.455 1.24 0.00 0.00 3.06
710 714 4.297768 TCAGGATTGATATCACAGGACCA 58.702 43.478 4.48 0.00 32.09 4.02
735 739 4.101448 GGTGTGCCCTGATCCGCT 62.101 66.667 0.00 0.00 0.00 5.52
760 764 3.126879 CCAAGCGGCAGATTGCGA 61.127 61.111 9.45 0.00 46.21 5.10
803 807 0.602562 TTGAATTTGCTTCCCGCCAG 59.397 50.000 0.00 0.00 38.05 4.85
837 841 1.082117 ACGCGCCAACTTATTCCTCG 61.082 55.000 5.73 0.00 0.00 4.63
842 846 0.462047 CCAACTTATTCCTCGCGCCT 60.462 55.000 0.00 0.00 0.00 5.52
953 957 1.202428 CGTTCTCTTAGCCACTAGCCC 60.202 57.143 0.00 0.00 45.47 5.19
1063 1085 4.812476 CGCCTCGGACAATCGCCA 62.812 66.667 0.00 0.00 0.00 5.69
1096 1118 2.956077 GATCCTCCTCCGCCTCCCTT 62.956 65.000 0.00 0.00 0.00 3.95
1099 1121 2.683933 TCCTCCGCCTCCCTTCAC 60.684 66.667 0.00 0.00 0.00 3.18
1101 1123 2.370445 CCTCCGCCTCCCTTCACAT 61.370 63.158 0.00 0.00 0.00 3.21
1107 1129 1.566298 GCCTCCCTTCACATGACCCT 61.566 60.000 0.00 0.00 0.00 4.34
1222 1244 2.586245 CTCCCATGCTCGGCTTCA 59.414 61.111 0.00 0.00 0.00 3.02
1285 1307 1.492133 CCCCACCTCCTCTTTCTGCA 61.492 60.000 0.00 0.00 0.00 4.41
1289 1311 1.122019 ACCTCCTCTTTCTGCACCGT 61.122 55.000 0.00 0.00 0.00 4.83
1391 1413 3.075005 CGTCTGGGACCCCGTCAT 61.075 66.667 8.45 0.00 39.42 3.06
1392 1414 1.755395 CGTCTGGGACCCCGTCATA 60.755 63.158 8.45 0.00 39.42 2.15
1411 1433 4.713814 TCATAGGTGAAGAGTGCAAGATCT 59.286 41.667 0.00 0.00 0.00 2.75
1417 1439 1.180907 AGAGTGCAAGATCTCTCGCA 58.819 50.000 9.65 9.65 36.45 5.10
1486 1508 4.357947 GCTGCGACCACCTCGACA 62.358 66.667 0.00 0.00 46.14 4.35
1494 1516 0.832135 ACCACCTCGACAGTCATGGT 60.832 55.000 8.29 8.29 35.60 3.55
1503 1525 1.073923 GACAGTCATGGTGGACCCTTT 59.926 52.381 0.00 0.00 38.59 3.11
1510 1532 1.338890 TGGTGGACCCTTTCGTGTCA 61.339 55.000 0.00 0.00 33.09 3.58
1528 1550 2.124193 CCTTCATGGGATGCGGCA 60.124 61.111 4.58 4.58 0.00 5.69
1548 1570 1.954146 ACGCAACATCACGTTCGCT 60.954 52.632 0.00 0.00 40.09 4.93
1562 1584 0.032952 TTCGCTTGCACCTACTCGTT 59.967 50.000 0.00 0.00 0.00 3.85
1584 1606 4.096003 GCCGGTGCCTAGAGCCAA 62.096 66.667 1.90 0.00 42.71 4.52
1606 1628 0.461548 AATTGAGATCGAGCAGCCGA 59.538 50.000 2.38 8.20 43.16 5.54
1615 1637 1.279527 CGAGCAGCCGACGTTTGTTA 61.280 55.000 0.00 0.00 0.00 2.41
1675 1697 0.319040 CACCTGCGATCCATACCTCG 60.319 60.000 0.00 0.00 37.92 4.63
1731 1753 2.981302 CTGTCGGTGATCTGGCCA 59.019 61.111 4.71 4.71 0.00 5.36
1767 1789 4.153411 AGTACTACTCTTGCACTGTCCTT 58.847 43.478 0.00 0.00 0.00 3.36
1900 1922 2.602257 TATCCAGCACAAGACGATGG 57.398 50.000 0.00 0.00 0.00 3.51
1985 4694 0.396435 TTCGTGAGGACAGGCAACAT 59.604 50.000 0.00 0.00 41.41 2.71
2084 4793 4.327680 GTTGTTCCCTACATGAGCTTCTT 58.672 43.478 0.00 0.00 36.44 2.52
2085 4794 3.942829 TGTTCCCTACATGAGCTTCTTG 58.057 45.455 0.00 0.00 0.00 3.02
2086 4795 3.327757 TGTTCCCTACATGAGCTTCTTGT 59.672 43.478 0.00 0.00 38.20 3.16
2087 4796 3.895232 TCCCTACATGAGCTTCTTGTC 57.105 47.619 0.00 0.00 36.38 3.18
2088 4797 3.173151 TCCCTACATGAGCTTCTTGTCA 58.827 45.455 0.00 0.00 36.38 3.58
2089 4798 3.055819 TCCCTACATGAGCTTCTTGTCAC 60.056 47.826 0.00 0.00 36.38 3.67
2090 4799 2.926200 CCTACATGAGCTTCTTGTCACG 59.074 50.000 0.00 0.00 36.38 4.35
2091 4800 1.151668 ACATGAGCTTCTTGTCACGC 58.848 50.000 0.00 0.00 30.10 5.34
2092 4801 0.445436 CATGAGCTTCTTGTCACGCC 59.555 55.000 0.00 0.00 0.00 5.68
2093 4802 0.674895 ATGAGCTTCTTGTCACGCCC 60.675 55.000 0.00 0.00 0.00 6.13
2094 4803 2.032681 AGCTTCTTGTCACGCCCC 59.967 61.111 0.00 0.00 0.00 5.80
2095 4804 2.032681 GCTTCTTGTCACGCCCCT 59.967 61.111 0.00 0.00 0.00 4.79
2096 4805 2.035442 GCTTCTTGTCACGCCCCTC 61.035 63.158 0.00 0.00 0.00 4.30
2097 4806 1.674057 CTTCTTGTCACGCCCCTCT 59.326 57.895 0.00 0.00 0.00 3.69
2098 4807 0.035458 CTTCTTGTCACGCCCCTCTT 59.965 55.000 0.00 0.00 0.00 2.85
2099 4808 1.275291 CTTCTTGTCACGCCCCTCTTA 59.725 52.381 0.00 0.00 0.00 2.10
2100 4809 0.606604 TCTTGTCACGCCCCTCTTAC 59.393 55.000 0.00 0.00 0.00 2.34
2101 4810 0.608640 CTTGTCACGCCCCTCTTACT 59.391 55.000 0.00 0.00 0.00 2.24
2102 4811 0.606604 TTGTCACGCCCCTCTTACTC 59.393 55.000 0.00 0.00 0.00 2.59
2103 4812 0.541063 TGTCACGCCCCTCTTACTCA 60.541 55.000 0.00 0.00 0.00 3.41
2104 4813 0.606604 GTCACGCCCCTCTTACTCAA 59.393 55.000 0.00 0.00 0.00 3.02
2105 4814 1.207329 GTCACGCCCCTCTTACTCAAT 59.793 52.381 0.00 0.00 0.00 2.57
2106 4815 1.906574 TCACGCCCCTCTTACTCAATT 59.093 47.619 0.00 0.00 0.00 2.32
2107 4816 2.093658 TCACGCCCCTCTTACTCAATTC 60.094 50.000 0.00 0.00 0.00 2.17
2108 4817 1.906574 ACGCCCCTCTTACTCAATTCA 59.093 47.619 0.00 0.00 0.00 2.57
2109 4818 2.304761 ACGCCCCTCTTACTCAATTCAA 59.695 45.455 0.00 0.00 0.00 2.69
2110 4819 2.939103 CGCCCCTCTTACTCAATTCAAG 59.061 50.000 0.00 0.00 0.00 3.02
2111 4820 2.685388 GCCCCTCTTACTCAATTCAAGC 59.315 50.000 0.00 0.00 0.00 4.01
2112 4821 3.623453 GCCCCTCTTACTCAATTCAAGCT 60.623 47.826 0.00 0.00 0.00 3.74
2113 4822 4.593956 CCCCTCTTACTCAATTCAAGCTT 58.406 43.478 0.00 0.00 0.00 3.74
2114 4823 4.637977 CCCCTCTTACTCAATTCAAGCTTC 59.362 45.833 0.00 0.00 0.00 3.86
2115 4824 4.637977 CCCTCTTACTCAATTCAAGCTTCC 59.362 45.833 0.00 0.00 0.00 3.46
2116 4825 5.248640 CCTCTTACTCAATTCAAGCTTCCA 58.751 41.667 0.00 0.00 0.00 3.53
2117 4826 5.884792 CCTCTTACTCAATTCAAGCTTCCAT 59.115 40.000 0.00 0.00 0.00 3.41
2118 4827 6.183360 CCTCTTACTCAATTCAAGCTTCCATG 60.183 42.308 0.00 0.00 0.00 3.66
2119 4828 5.649395 TCTTACTCAATTCAAGCTTCCATGG 59.351 40.000 4.97 4.97 0.00 3.66
2120 4829 2.494870 ACTCAATTCAAGCTTCCATGGC 59.505 45.455 6.96 0.00 0.00 4.40
2121 4830 1.473677 TCAATTCAAGCTTCCATGGCG 59.526 47.619 6.96 1.19 34.52 5.69
2122 4831 0.819582 AATTCAAGCTTCCATGGCGG 59.180 50.000 6.96 2.94 34.52 6.13
2123 4832 0.034186 ATTCAAGCTTCCATGGCGGA 60.034 50.000 6.96 0.00 44.40 5.54
2124 4833 0.034186 TTCAAGCTTCCATGGCGGAT 60.034 50.000 6.96 0.00 45.80 4.18
2125 4834 0.034186 TCAAGCTTCCATGGCGGATT 60.034 50.000 6.96 4.08 45.80 3.01
2126 4835 1.211703 TCAAGCTTCCATGGCGGATTA 59.788 47.619 6.96 0.00 45.80 1.75
2127 4836 1.334869 CAAGCTTCCATGGCGGATTAC 59.665 52.381 6.96 0.00 45.80 1.89
2128 4837 0.546122 AGCTTCCATGGCGGATTACA 59.454 50.000 6.96 0.00 45.80 2.41
2129 4838 0.947244 GCTTCCATGGCGGATTACAG 59.053 55.000 6.96 0.00 45.80 2.74
2130 4839 0.947244 CTTCCATGGCGGATTACAGC 59.053 55.000 6.96 0.00 45.80 4.40
2131 4840 0.813610 TTCCATGGCGGATTACAGCG 60.814 55.000 6.96 0.00 45.80 5.18
2132 4841 1.227527 CCATGGCGGATTACAGCGA 60.228 57.895 0.00 0.00 38.05 4.93
2133 4842 0.813610 CCATGGCGGATTACAGCGAA 60.814 55.000 0.00 0.00 38.05 4.70
2134 4843 1.229428 CATGGCGGATTACAGCGAAT 58.771 50.000 0.00 0.00 38.05 3.34
2135 4844 1.603802 CATGGCGGATTACAGCGAATT 59.396 47.619 0.00 0.00 38.05 2.17
2136 4845 1.745232 TGGCGGATTACAGCGAATTT 58.255 45.000 0.00 0.00 38.05 1.82
2137 4846 1.400142 TGGCGGATTACAGCGAATTTG 59.600 47.619 0.00 0.00 38.05 2.32
2138 4847 1.268539 GGCGGATTACAGCGAATTTGG 60.269 52.381 0.00 0.00 38.05 3.28
2139 4848 1.859998 GCGGATTACAGCGAATTTGGC 60.860 52.381 0.00 0.00 0.00 4.52
2140 4849 1.670811 CGGATTACAGCGAATTTGGCT 59.329 47.619 0.00 0.00 42.61 4.75
2141 4850 2.869801 CGGATTACAGCGAATTTGGCTA 59.130 45.455 5.55 0.00 39.08 3.93
2142 4851 3.059597 CGGATTACAGCGAATTTGGCTAG 60.060 47.826 5.55 3.95 39.08 3.42
2143 4852 3.251004 GGATTACAGCGAATTTGGCTAGG 59.749 47.826 5.55 0.00 39.08 3.02
2144 4853 2.325583 TACAGCGAATTTGGCTAGGG 57.674 50.000 5.55 0.00 39.08 3.53
2145 4854 0.328258 ACAGCGAATTTGGCTAGGGT 59.672 50.000 5.55 0.00 39.08 4.34
2146 4855 1.271926 ACAGCGAATTTGGCTAGGGTT 60.272 47.619 5.55 0.00 39.08 4.11
2147 4856 1.818674 CAGCGAATTTGGCTAGGGTTT 59.181 47.619 5.55 0.00 39.08 3.27
2148 4857 3.013921 CAGCGAATTTGGCTAGGGTTTA 58.986 45.455 5.55 0.00 39.08 2.01
2149 4858 3.632145 CAGCGAATTTGGCTAGGGTTTAT 59.368 43.478 5.55 0.00 39.08 1.40
2150 4859 3.632145 AGCGAATTTGGCTAGGGTTTATG 59.368 43.478 3.89 0.00 39.39 1.90
2151 4860 3.243401 GCGAATTTGGCTAGGGTTTATGG 60.243 47.826 0.00 0.00 0.00 2.74
2152 4861 3.317993 CGAATTTGGCTAGGGTTTATGGG 59.682 47.826 0.00 0.00 0.00 4.00
2153 4862 2.838637 TTTGGCTAGGGTTTATGGGG 57.161 50.000 0.00 0.00 0.00 4.96
2154 4863 1.988539 TTGGCTAGGGTTTATGGGGA 58.011 50.000 0.00 0.00 0.00 4.81
2155 4864 1.988539 TGGCTAGGGTTTATGGGGAA 58.011 50.000 0.00 0.00 0.00 3.97
2156 4865 1.850345 TGGCTAGGGTTTATGGGGAAG 59.150 52.381 0.00 0.00 0.00 3.46
2157 4866 2.132686 GGCTAGGGTTTATGGGGAAGA 58.867 52.381 0.00 0.00 0.00 2.87
2158 4867 2.106684 GGCTAGGGTTTATGGGGAAGAG 59.893 54.545 0.00 0.00 0.00 2.85
2159 4868 3.046374 GCTAGGGTTTATGGGGAAGAGA 58.954 50.000 0.00 0.00 0.00 3.10
2160 4869 3.458487 GCTAGGGTTTATGGGGAAGAGAA 59.542 47.826 0.00 0.00 0.00 2.87
2161 4870 4.445019 GCTAGGGTTTATGGGGAAGAGAAG 60.445 50.000 0.00 0.00 0.00 2.85
2162 4871 2.853077 AGGGTTTATGGGGAAGAGAAGG 59.147 50.000 0.00 0.00 0.00 3.46
2163 4872 2.091830 GGGTTTATGGGGAAGAGAAGGG 60.092 54.545 0.00 0.00 0.00 3.95
2164 4873 2.091830 GGTTTATGGGGAAGAGAAGGGG 60.092 54.545 0.00 0.00 0.00 4.79
2165 4874 2.850568 GTTTATGGGGAAGAGAAGGGGA 59.149 50.000 0.00 0.00 0.00 4.81
2166 4875 3.455085 TTATGGGGAAGAGAAGGGGAT 57.545 47.619 0.00 0.00 0.00 3.85
2167 4876 1.826447 ATGGGGAAGAGAAGGGGATC 58.174 55.000 0.00 0.00 0.00 3.36
2168 4877 0.691078 TGGGGAAGAGAAGGGGATCG 60.691 60.000 0.00 0.00 0.00 3.69
2169 4878 1.411651 GGGGAAGAGAAGGGGATCGG 61.412 65.000 0.00 0.00 0.00 4.18
2170 4879 1.411651 GGGAAGAGAAGGGGATCGGG 61.412 65.000 0.00 0.00 0.00 5.14
2171 4880 0.398664 GGAAGAGAAGGGGATCGGGA 60.399 60.000 0.00 0.00 0.00 5.14
2172 4881 1.044611 GAAGAGAAGGGGATCGGGAG 58.955 60.000 0.00 0.00 0.00 4.30
2173 4882 0.399233 AAGAGAAGGGGATCGGGAGG 60.399 60.000 0.00 0.00 0.00 4.30
2174 4883 1.233369 GAGAAGGGGATCGGGAGGA 59.767 63.158 0.00 0.00 0.00 3.71
2175 4884 0.398664 GAGAAGGGGATCGGGAGGAA 60.399 60.000 0.00 0.00 0.00 3.36
2176 4885 0.399233 AGAAGGGGATCGGGAGGAAG 60.399 60.000 0.00 0.00 0.00 3.46
2177 4886 1.384643 AAGGGGATCGGGAGGAAGG 60.385 63.158 0.00 0.00 0.00 3.46
2178 4887 1.898190 AAGGGGATCGGGAGGAAGGA 61.898 60.000 0.00 0.00 0.00 3.36
2179 4888 1.839296 GGGGATCGGGAGGAAGGAG 60.839 68.421 0.00 0.00 0.00 3.69
2180 4889 1.839296 GGGATCGGGAGGAAGGAGG 60.839 68.421 0.00 0.00 0.00 4.30
2181 4890 1.233369 GGATCGGGAGGAAGGAGGA 59.767 63.158 0.00 0.00 0.00 3.71
2182 4891 0.398664 GGATCGGGAGGAAGGAGGAA 60.399 60.000 0.00 0.00 0.00 3.36
2183 4892 1.044611 GATCGGGAGGAAGGAGGAAG 58.955 60.000 0.00 0.00 0.00 3.46
2184 4893 0.637195 ATCGGGAGGAAGGAGGAAGA 59.363 55.000 0.00 0.00 0.00 2.87
2185 4894 0.637195 TCGGGAGGAAGGAGGAAGAT 59.363 55.000 0.00 0.00 0.00 2.40
2186 4895 1.857583 TCGGGAGGAAGGAGGAAGATA 59.142 52.381 0.00 0.00 0.00 1.98
2187 4896 1.964933 CGGGAGGAAGGAGGAAGATAC 59.035 57.143 0.00 0.00 0.00 2.24
2188 4897 2.690026 CGGGAGGAAGGAGGAAGATACA 60.690 54.545 0.00 0.00 0.00 2.29
2189 4898 2.969262 GGGAGGAAGGAGGAAGATACAG 59.031 54.545 0.00 0.00 0.00 2.74
2190 4899 2.969262 GGAGGAAGGAGGAAGATACAGG 59.031 54.545 0.00 0.00 0.00 4.00
2191 4900 2.969262 GAGGAAGGAGGAAGATACAGGG 59.031 54.545 0.00 0.00 0.00 4.45
2192 4901 2.050918 GGAAGGAGGAAGATACAGGGG 58.949 57.143 0.00 0.00 0.00 4.79
2193 4902 2.360423 GGAAGGAGGAAGATACAGGGGA 60.360 54.545 0.00 0.00 0.00 4.81
2194 4903 3.385115 GAAGGAGGAAGATACAGGGGAA 58.615 50.000 0.00 0.00 0.00 3.97
2195 4904 3.053359 AGGAGGAAGATACAGGGGAAG 57.947 52.381 0.00 0.00 0.00 3.46
2196 4905 2.050918 GGAGGAAGATACAGGGGAAGG 58.949 57.143 0.00 0.00 0.00 3.46
2197 4906 2.050918 GAGGAAGATACAGGGGAAGGG 58.949 57.143 0.00 0.00 0.00 3.95
2198 4907 1.657162 AGGAAGATACAGGGGAAGGGA 59.343 52.381 0.00 0.00 0.00 4.20
2199 4908 2.047296 AGGAAGATACAGGGGAAGGGAA 59.953 50.000 0.00 0.00 0.00 3.97
2200 4909 2.850568 GGAAGATACAGGGGAAGGGAAA 59.149 50.000 0.00 0.00 0.00 3.13
2201 4910 3.371702 GGAAGATACAGGGGAAGGGAAAC 60.372 52.174 0.00 0.00 0.00 2.78
2202 4911 2.929301 AGATACAGGGGAAGGGAAACA 58.071 47.619 0.00 0.00 0.00 2.83
2203 4912 2.846827 AGATACAGGGGAAGGGAAACAG 59.153 50.000 0.00 0.00 0.00 3.16
2204 4913 1.368374 TACAGGGGAAGGGAAACAGG 58.632 55.000 0.00 0.00 0.00 4.00
2205 4914 1.384191 CAGGGGAAGGGAAACAGGG 59.616 63.158 0.00 0.00 0.00 4.45
2206 4915 1.140134 CAGGGGAAGGGAAACAGGGA 61.140 60.000 0.00 0.00 0.00 4.20
2207 4916 0.846870 AGGGGAAGGGAAACAGGGAG 60.847 60.000 0.00 0.00 0.00 4.30
2208 4917 0.845102 GGGGAAGGGAAACAGGGAGA 60.845 60.000 0.00 0.00 0.00 3.71
2209 4918 1.073098 GGGAAGGGAAACAGGGAGAA 58.927 55.000 0.00 0.00 0.00 2.87
2210 4919 1.004862 GGGAAGGGAAACAGGGAGAAG 59.995 57.143 0.00 0.00 0.00 2.85
2211 4920 1.004862 GGAAGGGAAACAGGGAGAAGG 59.995 57.143 0.00 0.00 0.00 3.46
2212 4921 1.705745 GAAGGGAAACAGGGAGAAGGT 59.294 52.381 0.00 0.00 0.00 3.50
2213 4922 1.834540 AGGGAAACAGGGAGAAGGTT 58.165 50.000 0.00 0.00 0.00 3.50
2214 4923 1.705745 AGGGAAACAGGGAGAAGGTTC 59.294 52.381 0.00 0.00 0.00 3.62
2215 4924 1.610886 GGGAAACAGGGAGAAGGTTCG 60.611 57.143 0.00 0.00 0.00 3.95
2216 4925 1.346722 GGAAACAGGGAGAAGGTTCGA 59.653 52.381 0.00 0.00 0.00 3.71
2217 4926 2.414806 GAAACAGGGAGAAGGTTCGAC 58.585 52.381 0.00 0.00 0.00 4.20
2218 4927 0.685660 AACAGGGAGAAGGTTCGACC 59.314 55.000 0.00 0.00 38.99 4.79
2219 4928 0.471211 ACAGGGAGAAGGTTCGACCA 60.471 55.000 6.78 0.00 41.95 4.02
2220 4929 0.685097 CAGGGAGAAGGTTCGACCAA 59.315 55.000 6.78 0.00 41.95 3.67
2221 4930 0.685660 AGGGAGAAGGTTCGACCAAC 59.314 55.000 6.78 0.00 41.95 3.77
2222 4931 0.685660 GGGAGAAGGTTCGACCAACT 59.314 55.000 6.78 5.23 41.95 3.16
2223 4932 1.897802 GGGAGAAGGTTCGACCAACTA 59.102 52.381 6.78 0.00 41.95 2.24
2224 4933 2.353505 GGGAGAAGGTTCGACCAACTAC 60.354 54.545 6.78 5.81 41.95 2.73
2225 4934 2.298163 GGAGAAGGTTCGACCAACTACA 59.702 50.000 6.78 0.00 41.95 2.74
2226 4935 3.243975 GGAGAAGGTTCGACCAACTACAA 60.244 47.826 6.78 0.00 41.95 2.41
2227 4936 4.562963 GGAGAAGGTTCGACCAACTACAAT 60.563 45.833 6.78 0.00 41.95 2.71
2228 4937 4.969484 AGAAGGTTCGACCAACTACAATT 58.031 39.130 6.78 0.00 41.95 2.32
2229 4938 4.995487 AGAAGGTTCGACCAACTACAATTC 59.005 41.667 6.78 0.90 41.95 2.17
2230 4939 3.671716 AGGTTCGACCAACTACAATTCC 58.328 45.455 6.78 0.00 41.95 3.01
2231 4940 2.414138 GGTTCGACCAACTACAATTCCG 59.586 50.000 0.00 0.00 38.42 4.30
2232 4941 3.062042 GTTCGACCAACTACAATTCCGT 58.938 45.455 0.00 0.00 31.50 4.69
2233 4942 2.679450 TCGACCAACTACAATTCCGTG 58.321 47.619 0.00 0.00 0.00 4.94
2234 4943 1.127951 CGACCAACTACAATTCCGTGC 59.872 52.381 0.00 0.00 0.00 5.34
2235 4944 1.467342 GACCAACTACAATTCCGTGCC 59.533 52.381 0.00 0.00 0.00 5.01
2236 4945 1.073284 ACCAACTACAATTCCGTGCCT 59.927 47.619 0.00 0.00 0.00 4.75
2237 4946 1.737793 CCAACTACAATTCCGTGCCTC 59.262 52.381 0.00 0.00 0.00 4.70
2238 4947 2.615493 CCAACTACAATTCCGTGCCTCT 60.615 50.000 0.00 0.00 0.00 3.69
2239 4948 2.673368 CAACTACAATTCCGTGCCTCTC 59.327 50.000 0.00 0.00 0.00 3.20
2240 4949 2.180276 ACTACAATTCCGTGCCTCTCT 58.820 47.619 0.00 0.00 0.00 3.10
2241 4950 3.362706 ACTACAATTCCGTGCCTCTCTA 58.637 45.455 0.00 0.00 0.00 2.43
2242 4951 2.674796 ACAATTCCGTGCCTCTCTAC 57.325 50.000 0.00 0.00 0.00 2.59
2243 4952 2.180276 ACAATTCCGTGCCTCTCTACT 58.820 47.619 0.00 0.00 0.00 2.57
2244 4953 2.166664 ACAATTCCGTGCCTCTCTACTC 59.833 50.000 0.00 0.00 0.00 2.59
2245 4954 1.025812 ATTCCGTGCCTCTCTACTCG 58.974 55.000 0.00 0.00 0.00 4.18
2246 4955 0.035725 TTCCGTGCCTCTCTACTCGA 60.036 55.000 0.00 0.00 0.00 4.04
2247 4956 0.035725 TCCGTGCCTCTCTACTCGAA 60.036 55.000 0.00 0.00 0.00 3.71
2248 4957 0.099082 CCGTGCCTCTCTACTCGAAC 59.901 60.000 0.00 0.00 0.00 3.95
2249 4958 0.099082 CGTGCCTCTCTACTCGAACC 59.901 60.000 0.00 0.00 0.00 3.62
2250 4959 0.456628 GTGCCTCTCTACTCGAACCC 59.543 60.000 0.00 0.00 0.00 4.11
2251 4960 1.030488 TGCCTCTCTACTCGAACCCG 61.030 60.000 0.00 0.00 37.07 5.28
2252 4961 1.726533 GCCTCTCTACTCGAACCCGG 61.727 65.000 0.00 0.00 36.24 5.73
2253 4962 1.102222 CCTCTCTACTCGAACCCGGG 61.102 65.000 22.25 22.25 43.20 5.73
2259 4968 2.987125 CTCGAACCCGGGTCCATT 59.013 61.111 30.40 11.97 36.24 3.16
2260 4969 1.298667 CTCGAACCCGGGTCCATTT 59.701 57.895 30.40 11.47 36.24 2.32
2261 4970 0.538118 CTCGAACCCGGGTCCATTTA 59.462 55.000 30.40 8.73 36.24 1.40
2262 4971 0.982704 TCGAACCCGGGTCCATTTAA 59.017 50.000 30.40 5.60 36.24 1.52
2263 4972 1.089112 CGAACCCGGGTCCATTTAAC 58.911 55.000 30.40 9.90 0.00 2.01
2264 4973 1.466856 GAACCCGGGTCCATTTAACC 58.533 55.000 30.40 3.97 35.97 2.85
2271 4980 2.124277 GGTCCATTTAACCCTTCGCT 57.876 50.000 0.00 0.00 0.00 4.93
2272 4981 3.271055 GGTCCATTTAACCCTTCGCTA 57.729 47.619 0.00 0.00 0.00 4.26
2273 4982 2.941064 GGTCCATTTAACCCTTCGCTAC 59.059 50.000 0.00 0.00 0.00 3.58
2274 4983 3.602483 GTCCATTTAACCCTTCGCTACA 58.398 45.455 0.00 0.00 0.00 2.74
2275 4984 4.196971 GTCCATTTAACCCTTCGCTACAT 58.803 43.478 0.00 0.00 0.00 2.29
2276 4985 4.272748 GTCCATTTAACCCTTCGCTACATC 59.727 45.833 0.00 0.00 0.00 3.06
2277 4986 4.163458 TCCATTTAACCCTTCGCTACATCT 59.837 41.667 0.00 0.00 0.00 2.90
2278 4987 4.511826 CCATTTAACCCTTCGCTACATCTC 59.488 45.833 0.00 0.00 0.00 2.75
2279 4988 3.814005 TTAACCCTTCGCTACATCTCC 57.186 47.619 0.00 0.00 0.00 3.71
2280 4989 0.831307 AACCCTTCGCTACATCTCCC 59.169 55.000 0.00 0.00 0.00 4.30
2281 4990 0.325296 ACCCTTCGCTACATCTCCCA 60.325 55.000 0.00 0.00 0.00 4.37
2282 4991 0.830648 CCCTTCGCTACATCTCCCAA 59.169 55.000 0.00 0.00 0.00 4.12
2283 4992 1.202580 CCCTTCGCTACATCTCCCAAG 60.203 57.143 0.00 0.00 0.00 3.61
2284 4993 1.482593 CCTTCGCTACATCTCCCAAGT 59.517 52.381 0.00 0.00 0.00 3.16
2285 4994 2.482142 CCTTCGCTACATCTCCCAAGTC 60.482 54.545 0.00 0.00 0.00 3.01
2286 4995 0.738975 TCGCTACATCTCCCAAGTCG 59.261 55.000 0.00 0.00 0.00 4.18
2287 4996 0.738975 CGCTACATCTCCCAAGTCGA 59.261 55.000 0.00 0.00 0.00 4.20
2288 4997 1.534175 CGCTACATCTCCCAAGTCGAC 60.534 57.143 7.70 7.70 0.00 4.20
2289 4998 1.534175 GCTACATCTCCCAAGTCGACG 60.534 57.143 10.46 0.00 0.00 5.12
2290 4999 1.065701 CTACATCTCCCAAGTCGACGG 59.934 57.143 10.46 6.19 0.00 4.79
2291 5000 1.141881 CATCTCCCAAGTCGACGGG 59.858 63.158 19.48 19.48 44.60 5.28
2292 5001 1.305046 ATCTCCCAAGTCGACGGGT 60.305 57.895 23.11 6.40 43.57 5.28
2293 5002 1.321074 ATCTCCCAAGTCGACGGGTC 61.321 60.000 23.11 0.00 43.57 4.46
2308 5017 4.913126 GTCGTAGAGCCTGTTGGG 57.087 61.111 0.00 0.00 36.95 4.12
2318 5027 3.741476 CTGTTGGGCCGCTTGCTC 61.741 66.667 0.00 0.00 42.61 4.26
2321 5030 4.722700 TTGGGCCGCTTGCTCCTC 62.723 66.667 0.00 0.00 41.03 3.71
2323 5032 4.416738 GGGCCGCTTGCTCCTCTT 62.417 66.667 0.00 0.00 40.92 2.85
2324 5033 3.130160 GGCCGCTTGCTCCTCTTG 61.130 66.667 0.00 0.00 40.92 3.02
2325 5034 3.130160 GCCGCTTGCTCCTCTTGG 61.130 66.667 0.00 0.00 36.87 3.61
2326 5035 2.437359 CCGCTTGCTCCTCTTGGG 60.437 66.667 0.00 0.00 0.00 4.12
2327 5036 3.130160 CGCTTGCTCCTCTTGGGC 61.130 66.667 0.00 0.00 34.39 5.36
2328 5037 2.753446 GCTTGCTCCTCTTGGGCC 60.753 66.667 0.00 0.00 34.39 5.80
2329 5038 2.437359 CTTGCTCCTCTTGGGCCG 60.437 66.667 0.00 0.00 34.39 6.13
2330 5039 3.249189 TTGCTCCTCTTGGGCCGT 61.249 61.111 0.00 0.00 34.39 5.68
2331 5040 3.254024 TTGCTCCTCTTGGGCCGTC 62.254 63.158 0.00 0.00 34.39 4.79
2332 5041 4.475135 GCTCCTCTTGGGCCGTCC 62.475 72.222 0.00 0.00 34.39 4.79
2333 5042 4.148825 CTCCTCTTGGGCCGTCCG 62.149 72.222 0.00 0.00 38.76 4.79
2336 5045 4.760047 CTCTTGGGCCGTCCGGTG 62.760 72.222 7.66 0.00 38.76 4.94
2354 5063 3.461773 GCGCTGGTGGGCTCTAGA 61.462 66.667 0.00 0.00 46.81 2.43
2355 5064 2.811101 CGCTGGTGGGCTCTAGAG 59.189 66.667 15.85 15.85 0.00 2.43
2356 5065 2.790791 CGCTGGTGGGCTCTAGAGG 61.791 68.421 21.23 3.86 0.00 3.69
2357 5066 2.439104 GCTGGTGGGCTCTAGAGGG 61.439 68.421 21.23 0.00 0.00 4.30
2358 5067 1.311403 CTGGTGGGCTCTAGAGGGA 59.689 63.158 21.23 0.00 0.00 4.20
2359 5068 1.001760 TGGTGGGCTCTAGAGGGAC 59.998 63.158 21.23 4.65 0.00 4.46
2361 5070 1.045911 GGTGGGCTCTAGAGGGACTG 61.046 65.000 21.23 0.00 41.55 3.51
2362 5071 1.381872 TGGGCTCTAGAGGGACTGC 60.382 63.158 21.23 6.37 41.55 4.40
2363 5072 1.075600 GGGCTCTAGAGGGACTGCT 60.076 63.158 21.23 0.00 41.55 4.24
2364 5073 1.398958 GGGCTCTAGAGGGACTGCTG 61.399 65.000 21.23 0.00 41.55 4.41
2365 5074 0.396417 GGCTCTAGAGGGACTGCTGA 60.396 60.000 21.23 0.00 41.55 4.26
2366 5075 0.744281 GCTCTAGAGGGACTGCTGAC 59.256 60.000 21.23 0.00 41.55 3.51
2367 5076 1.021202 CTCTAGAGGGACTGCTGACG 58.979 60.000 12.27 0.00 41.55 4.35
2368 5077 0.328592 TCTAGAGGGACTGCTGACGT 59.671 55.000 0.00 0.00 41.55 4.34
2369 5078 1.558294 TCTAGAGGGACTGCTGACGTA 59.442 52.381 0.00 0.00 41.55 3.57
2370 5079 1.944024 CTAGAGGGACTGCTGACGTAG 59.056 57.143 0.00 0.00 41.55 3.51
2371 5080 0.038455 AGAGGGACTGCTGACGTAGT 59.962 55.000 0.00 0.00 44.36 2.73
2372 5081 1.281287 AGAGGGACTGCTGACGTAGTA 59.719 52.381 0.00 0.00 40.67 1.82
2373 5082 1.671845 GAGGGACTGCTGACGTAGTAG 59.328 57.143 0.00 0.00 40.67 2.57
2374 5083 1.682394 AGGGACTGCTGACGTAGTAGG 60.682 57.143 12.19 0.00 42.74 3.18
2375 5084 4.919936 AGGGACTGCTGACGTAGTAGGG 62.920 59.091 12.19 0.00 42.74 3.53
2382 5091 2.356278 ACGTAGTAGGGCCCGTGA 59.644 61.111 18.44 2.36 41.94 4.35
2383 5092 2.048603 ACGTAGTAGGGCCCGTGAC 61.049 63.158 18.44 16.23 41.94 3.67
2384 5093 2.048023 CGTAGTAGGGCCCGTGACA 61.048 63.158 18.44 0.00 0.00 3.58
2385 5094 1.389609 CGTAGTAGGGCCCGTGACAT 61.390 60.000 18.44 0.00 0.00 3.06
2386 5095 0.388294 GTAGTAGGGCCCGTGACATC 59.612 60.000 18.44 9.28 0.00 3.06
2387 5096 0.757935 TAGTAGGGCCCGTGACATCC 60.758 60.000 18.44 0.00 0.00 3.51
2388 5097 2.766651 TAGGGCCCGTGACATCCC 60.767 66.667 18.44 0.00 39.05 3.85
2405 5114 2.763651 CCCCCTTTCTTTAGACGCG 58.236 57.895 3.53 3.53 0.00 6.01
2406 5115 0.743345 CCCCCTTTCTTTAGACGCGG 60.743 60.000 12.47 0.00 0.00 6.46
2407 5116 1.366854 CCCCTTTCTTTAGACGCGGC 61.367 60.000 12.47 7.86 0.00 6.53
2408 5117 0.391263 CCCTTTCTTTAGACGCGGCT 60.391 55.000 22.96 22.96 0.00 5.52
2409 5118 1.439679 CCTTTCTTTAGACGCGGCTT 58.560 50.000 25.09 3.97 0.00 4.35
2410 5119 1.128692 CCTTTCTTTAGACGCGGCTTG 59.871 52.381 25.09 11.81 0.00 4.01
2411 5120 1.798813 CTTTCTTTAGACGCGGCTTGT 59.201 47.619 25.09 0.00 0.00 3.16
2412 5121 1.425412 TTCTTTAGACGCGGCTTGTC 58.575 50.000 25.09 1.52 36.60 3.18
2413 5122 0.389426 TCTTTAGACGCGGCTTGTCC 60.389 55.000 25.09 0.00 37.04 4.02
2414 5123 1.359459 CTTTAGACGCGGCTTGTCCC 61.359 60.000 25.09 0.00 37.04 4.46
2415 5124 2.791501 TTTAGACGCGGCTTGTCCCC 62.792 60.000 25.09 0.00 37.04 4.81
2458 5167 3.923827 GCTTCTGAGCTCGAAGAAATC 57.076 47.619 33.15 20.49 45.65 2.17
2459 5168 2.607180 GCTTCTGAGCTCGAAGAAATCC 59.393 50.000 33.15 20.25 45.65 3.01
2460 5169 3.678529 GCTTCTGAGCTCGAAGAAATCCT 60.679 47.826 33.15 0.00 45.65 3.24
2461 5170 3.791973 TCTGAGCTCGAAGAAATCCTC 57.208 47.619 9.64 0.00 34.09 3.71
2462 5171 2.428890 TCTGAGCTCGAAGAAATCCTCC 59.571 50.000 9.64 0.00 34.09 4.30
2463 5172 1.482593 TGAGCTCGAAGAAATCCTCCC 59.517 52.381 9.64 0.00 34.09 4.30
2464 5173 1.482593 GAGCTCGAAGAAATCCTCCCA 59.517 52.381 0.00 0.00 34.09 4.37
2465 5174 2.103941 GAGCTCGAAGAAATCCTCCCAT 59.896 50.000 0.00 0.00 34.09 4.00
2466 5175 2.158842 AGCTCGAAGAAATCCTCCCATG 60.159 50.000 0.00 0.00 34.09 3.66
2467 5176 2.158900 GCTCGAAGAAATCCTCCCATGA 60.159 50.000 0.00 0.00 34.09 3.07
2468 5177 3.495806 GCTCGAAGAAATCCTCCCATGAT 60.496 47.826 0.00 0.00 34.09 2.45
2469 5178 4.063689 CTCGAAGAAATCCTCCCATGATG 58.936 47.826 0.00 0.00 34.09 3.07
2470 5179 2.551459 CGAAGAAATCCTCCCATGATGC 59.449 50.000 0.00 0.00 0.00 3.91
2471 5180 2.671896 AGAAATCCTCCCATGATGCC 57.328 50.000 0.00 0.00 0.00 4.40
2472 5181 1.854939 AGAAATCCTCCCATGATGCCA 59.145 47.619 0.00 0.00 0.00 4.92
2473 5182 2.158505 AGAAATCCTCCCATGATGCCAG 60.159 50.000 0.00 0.00 0.00 4.85
2474 5183 0.178970 AATCCTCCCATGATGCCAGC 60.179 55.000 0.00 0.00 0.00 4.85
2475 5184 2.407440 ATCCTCCCATGATGCCAGCG 62.407 60.000 0.00 0.00 0.00 5.18
2476 5185 3.285215 CTCCCATGATGCCAGCGC 61.285 66.667 0.00 0.00 0.00 5.92
2477 5186 3.769369 CTCCCATGATGCCAGCGCT 62.769 63.158 2.64 2.64 35.36 5.92
2478 5187 2.831742 CCCATGATGCCAGCGCTT 60.832 61.111 7.50 0.00 35.36 4.68
2479 5188 2.719979 CCATGATGCCAGCGCTTC 59.280 61.111 7.50 2.81 39.14 3.86
2480 5189 2.719979 CATGATGCCAGCGCTTCC 59.280 61.111 7.50 1.22 38.17 3.46
2481 5190 2.898840 ATGATGCCAGCGCTTCCG 60.899 61.111 7.50 0.00 38.17 4.30
2489 5198 4.443266 AGCGCTTCCGGCTGAGAC 62.443 66.667 2.64 0.00 39.77 3.36
2491 5200 4.116328 CGCTTCCGGCTGAGACGA 62.116 66.667 10.44 0.00 35.20 4.20
2492 5201 2.507324 GCTTCCGGCTGAGACGAC 60.507 66.667 10.44 0.00 35.20 4.34
2493 5202 2.182030 CTTCCGGCTGAGACGACC 59.818 66.667 10.44 0.00 35.20 4.79
2494 5203 2.599281 TTCCGGCTGAGACGACCA 60.599 61.111 10.44 0.00 35.20 4.02
2495 5204 1.949847 CTTCCGGCTGAGACGACCAT 61.950 60.000 10.44 0.00 35.20 3.55
2496 5205 1.541310 TTCCGGCTGAGACGACCATT 61.541 55.000 10.44 0.00 35.20 3.16
2497 5206 1.079127 CCGGCTGAGACGACCATTT 60.079 57.895 10.44 0.00 35.20 2.32
2498 5207 1.361668 CCGGCTGAGACGACCATTTG 61.362 60.000 10.44 0.00 35.20 2.32
2499 5208 0.389817 CGGCTGAGACGACCATTTGA 60.390 55.000 0.00 0.00 35.20 2.69
2500 5209 1.740380 CGGCTGAGACGACCATTTGAT 60.740 52.381 0.00 0.00 35.20 2.57
2501 5210 1.936547 GGCTGAGACGACCATTTGATC 59.063 52.381 0.00 0.00 0.00 2.92
2502 5211 2.621338 GCTGAGACGACCATTTGATCA 58.379 47.619 0.00 0.00 0.00 2.92
2503 5212 3.002791 GCTGAGACGACCATTTGATCAA 58.997 45.455 3.38 3.38 0.00 2.57
2504 5213 3.181516 GCTGAGACGACCATTTGATCAAC 60.182 47.826 7.89 0.00 0.00 3.18
2505 5214 3.996363 CTGAGACGACCATTTGATCAACA 59.004 43.478 7.89 0.11 0.00 3.33
2506 5215 3.745975 TGAGACGACCATTTGATCAACAC 59.254 43.478 7.89 0.00 0.00 3.32
2507 5216 3.997021 GAGACGACCATTTGATCAACACT 59.003 43.478 7.89 0.00 0.00 3.55
2508 5217 4.389374 AGACGACCATTTGATCAACACTT 58.611 39.130 7.89 0.00 0.00 3.16
2509 5218 4.214119 AGACGACCATTTGATCAACACTTG 59.786 41.667 7.89 3.99 0.00 3.16
2510 5219 3.253188 ACGACCATTTGATCAACACTTGG 59.747 43.478 7.89 14.48 37.04 3.61
2511 5220 3.366273 CGACCATTTGATCAACACTTGGG 60.366 47.826 21.10 13.79 35.99 4.12
2512 5221 2.899256 ACCATTTGATCAACACTTGGGG 59.101 45.455 21.10 12.78 35.99 4.96
2513 5222 2.234414 CCATTTGATCAACACTTGGGGG 59.766 50.000 7.89 0.00 31.16 5.40
2514 5223 3.164268 CATTTGATCAACACTTGGGGGA 58.836 45.455 7.89 0.00 0.00 4.81
2515 5224 3.541242 TTTGATCAACACTTGGGGGAT 57.459 42.857 7.89 0.00 0.00 3.85
2516 5225 2.806945 TGATCAACACTTGGGGGATC 57.193 50.000 0.00 0.00 35.95 3.36
2517 5226 2.278245 TGATCAACACTTGGGGGATCT 58.722 47.619 0.00 0.00 36.28 2.75
2518 5227 2.649312 TGATCAACACTTGGGGGATCTT 59.351 45.455 0.00 0.00 36.28 2.40
2519 5228 2.879103 TCAACACTTGGGGGATCTTC 57.121 50.000 0.00 0.00 0.00 2.87
2520 5229 1.003118 TCAACACTTGGGGGATCTTCG 59.997 52.381 0.00 0.00 0.00 3.79
2521 5230 1.003118 CAACACTTGGGGGATCTTCGA 59.997 52.381 0.00 0.00 0.00 3.71
2522 5231 0.905357 ACACTTGGGGGATCTTCGAG 59.095 55.000 0.00 0.00 0.00 4.04
2523 5232 0.905357 CACTTGGGGGATCTTCGAGT 59.095 55.000 0.00 0.00 0.00 4.18
2524 5233 1.279271 CACTTGGGGGATCTTCGAGTT 59.721 52.381 0.00 0.00 0.00 3.01
2525 5234 1.279271 ACTTGGGGGATCTTCGAGTTG 59.721 52.381 0.00 0.00 0.00 3.16
2526 5235 0.035439 TTGGGGGATCTTCGAGTTGC 60.035 55.000 0.00 0.00 0.00 4.17
2527 5236 1.153147 GGGGGATCTTCGAGTTGCC 60.153 63.158 0.00 0.00 0.00 4.52
2528 5237 1.153147 GGGGATCTTCGAGTTGCCC 60.153 63.158 5.39 5.39 38.21 5.36
2529 5238 1.627297 GGGGATCTTCGAGTTGCCCT 61.627 60.000 11.93 0.00 41.01 5.19
2530 5239 0.253327 GGGATCTTCGAGTTGCCCTT 59.747 55.000 7.90 0.00 32.78 3.95
2531 5240 1.373570 GGATCTTCGAGTTGCCCTTG 58.626 55.000 0.00 0.00 0.00 3.61
2532 5241 1.373570 GATCTTCGAGTTGCCCTTGG 58.626 55.000 0.00 0.00 0.00 3.61
2533 5242 0.693049 ATCTTCGAGTTGCCCTTGGT 59.307 50.000 0.00 0.00 0.00 3.67
2534 5243 1.344065 TCTTCGAGTTGCCCTTGGTA 58.656 50.000 0.00 0.00 0.00 3.25
2535 5244 1.695242 TCTTCGAGTTGCCCTTGGTAA 59.305 47.619 0.00 0.00 0.00 2.85
2536 5245 2.304761 TCTTCGAGTTGCCCTTGGTAAT 59.695 45.455 0.00 0.00 28.75 1.89
2537 5246 2.396590 TCGAGTTGCCCTTGGTAATC 57.603 50.000 0.00 0.00 28.75 1.75
2538 5247 1.626321 TCGAGTTGCCCTTGGTAATCA 59.374 47.619 0.00 0.00 28.75 2.57
2539 5248 2.009774 CGAGTTGCCCTTGGTAATCAG 58.990 52.381 0.00 0.00 28.75 2.90
2540 5249 2.354704 CGAGTTGCCCTTGGTAATCAGA 60.355 50.000 0.00 0.00 28.75 3.27
2541 5250 3.010420 GAGTTGCCCTTGGTAATCAGAC 58.990 50.000 0.00 0.00 28.75 3.51
2542 5251 1.737793 GTTGCCCTTGGTAATCAGACG 59.262 52.381 0.00 0.00 28.75 4.18
2543 5252 0.392461 TGCCCTTGGTAATCAGACGC 60.392 55.000 0.00 0.00 0.00 5.19
2544 5253 1.095807 GCCCTTGGTAATCAGACGCC 61.096 60.000 0.00 0.00 0.00 5.68
2545 5254 0.541863 CCCTTGGTAATCAGACGCCT 59.458 55.000 0.00 0.00 0.00 5.52
2546 5255 1.656652 CCTTGGTAATCAGACGCCTG 58.343 55.000 0.00 0.00 41.74 4.85
2547 5256 1.066143 CCTTGGTAATCAGACGCCTGT 60.066 52.381 0.00 0.00 41.16 4.00
2548 5257 2.271800 CTTGGTAATCAGACGCCTGTC 58.728 52.381 0.00 0.00 45.86 3.51
2549 5258 0.535335 TGGTAATCAGACGCCTGTCC 59.465 55.000 0.00 0.00 46.74 4.02
2550 5259 0.535335 GGTAATCAGACGCCTGTCCA 59.465 55.000 0.00 0.00 46.74 4.02
2551 5260 1.471676 GGTAATCAGACGCCTGTCCAG 60.472 57.143 0.00 0.00 46.74 3.86
2552 5261 0.175760 TAATCAGACGCCTGTCCAGC 59.824 55.000 0.00 0.00 46.74 4.85
2553 5262 1.830587 AATCAGACGCCTGTCCAGCA 61.831 55.000 0.00 0.00 46.74 4.41
2554 5263 2.513026 ATCAGACGCCTGTCCAGCAC 62.513 60.000 0.00 0.00 46.74 4.40
2555 5264 4.008933 AGACGCCTGTCCAGCACC 62.009 66.667 0.00 0.00 46.74 5.01
2556 5265 4.008933 GACGCCTGTCCAGCACCT 62.009 66.667 0.00 0.00 39.30 4.00
2557 5266 3.537206 GACGCCTGTCCAGCACCTT 62.537 63.158 0.00 0.00 39.30 3.50
2558 5267 2.743928 CGCCTGTCCAGCACCTTC 60.744 66.667 0.00 0.00 0.00 3.46
2559 5268 2.753029 GCCTGTCCAGCACCTTCT 59.247 61.111 0.00 0.00 0.00 2.85
2560 5269 1.376553 GCCTGTCCAGCACCTTCTC 60.377 63.158 0.00 0.00 0.00 2.87
2561 5270 1.298014 CCTGTCCAGCACCTTCTCC 59.702 63.158 0.00 0.00 0.00 3.71
2562 5271 1.079543 CTGTCCAGCACCTTCTCCG 60.080 63.158 0.00 0.00 0.00 4.63
2563 5272 2.266055 GTCCAGCACCTTCTCCGG 59.734 66.667 0.00 0.00 0.00 5.14
2564 5273 2.119611 TCCAGCACCTTCTCCGGA 59.880 61.111 2.93 2.93 0.00 5.14
2565 5274 1.535444 TCCAGCACCTTCTCCGGAA 60.535 57.895 5.23 0.00 0.00 4.30
2566 5275 1.125093 TCCAGCACCTTCTCCGGAAA 61.125 55.000 5.23 2.11 0.00 3.13
2567 5276 0.674895 CCAGCACCTTCTCCGGAAAG 60.675 60.000 5.23 12.03 0.00 2.62
2568 5277 0.035458 CAGCACCTTCTCCGGAAAGT 59.965 55.000 5.23 0.00 0.00 2.66
2569 5278 0.321996 AGCACCTTCTCCGGAAAGTC 59.678 55.000 5.23 4.50 0.00 3.01
2570 5279 0.321996 GCACCTTCTCCGGAAAGTCT 59.678 55.000 5.23 0.00 0.00 3.24
2571 5280 1.941668 GCACCTTCTCCGGAAAGTCTG 60.942 57.143 5.23 10.26 0.00 3.51
2572 5281 0.977395 ACCTTCTCCGGAAAGTCTGG 59.023 55.000 5.23 4.87 44.41 3.86
2573 5282 0.391793 CCTTCTCCGGAAAGTCTGGC 60.392 60.000 5.23 0.00 42.73 4.85
2574 5283 0.737715 CTTCTCCGGAAAGTCTGGCG 60.738 60.000 5.23 0.00 42.73 5.69
2575 5284 2.125512 CTCCGGAAAGTCTGGCGG 60.126 66.667 5.23 0.00 42.73 6.13
2576 5285 2.602267 TCCGGAAAGTCTGGCGGA 60.602 61.111 0.00 0.00 42.73 5.54
2577 5286 2.125512 CCGGAAAGTCTGGCGGAG 60.126 66.667 0.00 0.00 35.89 4.63
2578 5287 2.646175 CCGGAAAGTCTGGCGGAGA 61.646 63.158 0.00 0.00 35.89 3.71
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
45 46 3.396570 CCGCCCCTACTCCCGTTT 61.397 66.667 0.00 0.00 0.00 3.60
50 51 3.834799 CACGTCCGCCCCTACTCC 61.835 72.222 0.00 0.00 0.00 3.85
65 67 0.747255 TATCCAGCGAGAAGGCTCAC 59.253 55.000 0.00 0.00 42.53 3.51
76 78 0.652592 CAAAACGAGCCTATCCAGCG 59.347 55.000 0.00 0.00 34.64 5.18
78 80 1.668419 CCCAAAACGAGCCTATCCAG 58.332 55.000 0.00 0.00 0.00 3.86
127 129 7.088272 TCTATTGGACATCATAATTACGACCG 58.912 38.462 0.00 0.00 0.00 4.79
198 202 4.279671 TCGTCAAAACTTGGCAATTATGGT 59.720 37.500 0.00 0.00 34.15 3.55
202 206 4.819630 AGAGTCGTCAAAACTTGGCAATTA 59.180 37.500 0.00 0.00 34.15 1.40
220 224 3.844577 ATTGCAGTGCATTTCAGAGTC 57.155 42.857 20.50 0.00 38.76 3.36
222 226 4.151689 CCAAAATTGCAGTGCATTTCAGAG 59.848 41.667 20.50 11.43 38.76 3.35
239 243 8.472413 CAGGAATTGTGTAGAATCATCCAAAAT 58.528 33.333 0.00 0.00 0.00 1.82
296 300 8.737168 TTATGAAGAATCATGGTCTCGAAAAT 57.263 30.769 1.69 0.00 45.82 1.82
302 306 8.674263 ACTCAATTATGAAGAATCATGGTCTC 57.326 34.615 1.69 0.00 45.82 3.36
350 354 9.958180 TCAGAAGGATCAAGTTATCACATTAAA 57.042 29.630 0.00 0.00 0.00 1.52
433 437 2.954318 TCGGGAAATCCTCGTACTAAGG 59.046 50.000 5.08 5.08 35.95 2.69
444 448 3.698040 TGTACTAGACAGTCGGGAAATCC 59.302 47.826 0.00 0.00 36.14 3.01
462 466 1.001048 GCCGGGAAAACCTTGTTGTAC 60.001 52.381 2.18 0.00 36.97 2.90
551 555 8.650143 AAAGTACAATTATGTTCTTGGACCAT 57.350 30.769 0.00 0.00 43.70 3.55
559 563 9.869757 GGGCAATAAAAAGTACAATTATGTTCT 57.130 29.630 0.00 0.00 41.05 3.01
561 565 8.308207 ACGGGCAATAAAAAGTACAATTATGTT 58.692 29.630 0.00 0.00 41.05 2.71
570 574 5.283294 ACAACAACGGGCAATAAAAAGTAC 58.717 37.500 0.00 0.00 0.00 2.73
573 577 5.047188 AGAACAACAACGGGCAATAAAAAG 58.953 37.500 0.00 0.00 0.00 2.27
599 603 3.887621 TCTATTAGTCTTTGGCAGCGT 57.112 42.857 0.00 0.00 0.00 5.07
645 649 2.270434 TGGGTCCTCTTCCAAGCTAT 57.730 50.000 0.00 0.00 0.00 2.97
672 676 0.250234 CTGATCCGTCTTCCAAGCCA 59.750 55.000 0.00 0.00 0.00 4.75
710 714 1.064003 TCAGGGCACACCAGTACATT 58.936 50.000 0.00 0.00 43.89 2.71
759 763 1.748493 TGCCGCCAACCAGAATATTTC 59.252 47.619 0.00 0.00 0.00 2.17
760 764 1.846007 TGCCGCCAACCAGAATATTT 58.154 45.000 0.00 0.00 0.00 1.40
803 807 1.860709 CGCGTGATTTTAACACCGTC 58.139 50.000 0.00 0.00 35.17 4.79
953 957 2.606272 CGCTAGGGTTAGGTTTTAAGCG 59.394 50.000 0.00 0.00 44.42 4.68
1063 1085 2.757124 GGATCTCCGGGGCCATGTT 61.757 63.158 4.39 0.00 0.00 2.71
1222 1244 0.694771 TGCTGCTTCAGGTTGAGGAT 59.305 50.000 0.00 0.00 31.21 3.24
1391 1413 4.348486 AGAGATCTTGCACTCTTCACCTA 58.652 43.478 0.00 0.00 40.02 3.08
1392 1414 3.172339 AGAGATCTTGCACTCTTCACCT 58.828 45.455 0.00 0.00 40.02 4.00
1426 1448 4.135493 GTTGAAGCCGAGCGCGTC 62.135 66.667 8.43 0.00 45.23 5.19
1486 1508 0.324943 CGAAAGGGTCCACCATGACT 59.675 55.000 0.00 0.00 43.89 3.41
1503 1525 1.066215 CATCCCATGAAGGTGACACGA 60.066 52.381 0.00 0.00 34.66 4.35
1510 1532 2.124151 GCCGCATCCCATGAAGGT 60.124 61.111 0.00 0.00 33.82 3.50
1534 1556 0.041312 GTGCAAGCGAACGTGATGTT 60.041 50.000 0.00 0.00 45.61 2.71
1535 1557 1.569493 GTGCAAGCGAACGTGATGT 59.431 52.632 0.00 0.00 0.00 3.06
1548 1570 0.320374 CCTCCAACGAGTAGGTGCAA 59.680 55.000 0.00 0.00 35.85 4.08
1577 1599 2.166459 TCGATCTCAATTCGTTGGCTCT 59.834 45.455 0.00 0.00 37.82 4.09
1584 1606 1.565305 GCTGCTCGATCTCAATTCGT 58.435 50.000 0.00 0.00 37.82 3.85
1606 1628 1.498043 GGTCGCCCGTTAACAAACGT 61.498 55.000 6.39 0.00 44.04 3.99
1647 1669 1.751924 GGATCGCAGGTGAAGTAGAGT 59.248 52.381 0.00 0.00 0.00 3.24
1675 1697 5.158494 GTCGTACCCCAACATTTTGAAATC 58.842 41.667 0.00 0.00 34.24 2.17
1731 1753 2.282674 TACTCGTGCTGGGACGGT 60.283 61.111 13.95 12.52 39.88 4.83
1767 1789 2.334946 GCCATGCTCCGCTTTCACA 61.335 57.895 0.00 0.00 0.00 3.58
1780 1802 2.703798 CGAACCCCAGCTTGCCATG 61.704 63.158 0.00 0.00 0.00 3.66
1852 1874 0.409092 TGCACCCATTCCACATTCCT 59.591 50.000 0.00 0.00 0.00 3.36
1917 1939 3.628280 GACCTCAGGTGGCGTCGAC 62.628 68.421 0.00 5.18 35.25 4.20
1985 4694 0.615331 GAGCTCCATGGAGAACACCA 59.385 55.000 40.29 5.59 44.53 4.17
2084 4793 0.541063 TGAGTAAGAGGGGCGTGACA 60.541 55.000 0.00 0.00 0.00 3.58
2085 4794 0.606604 TTGAGTAAGAGGGGCGTGAC 59.393 55.000 0.00 0.00 0.00 3.67
2086 4795 1.568504 ATTGAGTAAGAGGGGCGTGA 58.431 50.000 0.00 0.00 0.00 4.35
2087 4796 2.280628 GAATTGAGTAAGAGGGGCGTG 58.719 52.381 0.00 0.00 0.00 5.34
2088 4797 1.906574 TGAATTGAGTAAGAGGGGCGT 59.093 47.619 0.00 0.00 0.00 5.68
2089 4798 2.691409 TGAATTGAGTAAGAGGGGCG 57.309 50.000 0.00 0.00 0.00 6.13
2090 4799 2.685388 GCTTGAATTGAGTAAGAGGGGC 59.315 50.000 0.00 0.00 0.00 5.80
2091 4800 4.227864 AGCTTGAATTGAGTAAGAGGGG 57.772 45.455 0.00 0.00 0.00 4.79
2092 4801 4.637977 GGAAGCTTGAATTGAGTAAGAGGG 59.362 45.833 2.10 0.00 0.00 4.30
2093 4802 5.248640 TGGAAGCTTGAATTGAGTAAGAGG 58.751 41.667 2.10 0.00 0.00 3.69
2094 4803 6.183360 CCATGGAAGCTTGAATTGAGTAAGAG 60.183 42.308 5.56 0.00 0.00 2.85
2095 4804 5.649395 CCATGGAAGCTTGAATTGAGTAAGA 59.351 40.000 5.56 0.00 0.00 2.10
2096 4805 5.678107 GCCATGGAAGCTTGAATTGAGTAAG 60.678 44.000 18.40 0.00 0.00 2.34
2097 4806 4.158394 GCCATGGAAGCTTGAATTGAGTAA 59.842 41.667 18.40 0.00 0.00 2.24
2098 4807 3.696051 GCCATGGAAGCTTGAATTGAGTA 59.304 43.478 18.40 0.00 0.00 2.59
2099 4808 2.494870 GCCATGGAAGCTTGAATTGAGT 59.505 45.455 18.40 0.00 0.00 3.41
2100 4809 2.479049 CGCCATGGAAGCTTGAATTGAG 60.479 50.000 18.40 0.00 0.00 3.02
2101 4810 1.473677 CGCCATGGAAGCTTGAATTGA 59.526 47.619 18.40 0.00 0.00 2.57
2102 4811 1.470285 CCGCCATGGAAGCTTGAATTG 60.470 52.381 18.40 0.00 42.00 2.32
2103 4812 0.819582 CCGCCATGGAAGCTTGAATT 59.180 50.000 18.40 0.00 42.00 2.17
2104 4813 0.034186 TCCGCCATGGAAGCTTGAAT 60.034 50.000 18.40 0.00 46.38 2.57
2105 4814 1.378378 TCCGCCATGGAAGCTTGAA 59.622 52.632 18.40 0.00 46.38 2.69
2106 4815 3.076999 TCCGCCATGGAAGCTTGA 58.923 55.556 18.40 0.00 46.38 3.02
2114 4823 0.813610 TTCGCTGTAATCCGCCATGG 60.814 55.000 7.63 7.63 40.09 3.66
2115 4824 1.229428 ATTCGCTGTAATCCGCCATG 58.771 50.000 0.00 0.00 0.00 3.66
2116 4825 1.967319 AATTCGCTGTAATCCGCCAT 58.033 45.000 0.00 0.00 0.00 4.40
2117 4826 1.400142 CAAATTCGCTGTAATCCGCCA 59.600 47.619 0.00 0.00 0.00 5.69
2118 4827 1.268539 CCAAATTCGCTGTAATCCGCC 60.269 52.381 0.00 0.00 0.00 6.13
2119 4828 1.859998 GCCAAATTCGCTGTAATCCGC 60.860 52.381 0.00 0.00 0.00 5.54
2120 4829 1.670811 AGCCAAATTCGCTGTAATCCG 59.329 47.619 0.00 0.00 34.56 4.18
2121 4830 3.251004 CCTAGCCAAATTCGCTGTAATCC 59.749 47.826 9.64 0.00 37.12 3.01
2122 4831 3.251004 CCCTAGCCAAATTCGCTGTAATC 59.749 47.826 9.64 0.00 37.12 1.75
2123 4832 3.214328 CCCTAGCCAAATTCGCTGTAAT 58.786 45.455 9.64 0.00 37.12 1.89
2124 4833 2.026636 ACCCTAGCCAAATTCGCTGTAA 60.027 45.455 9.64 0.00 37.12 2.41
2125 4834 1.557832 ACCCTAGCCAAATTCGCTGTA 59.442 47.619 9.64 0.00 37.12 2.74
2126 4835 0.328258 ACCCTAGCCAAATTCGCTGT 59.672 50.000 9.64 0.00 37.12 4.40
2127 4836 1.463674 AACCCTAGCCAAATTCGCTG 58.536 50.000 9.64 1.74 37.12 5.18
2128 4837 2.215942 AAACCCTAGCCAAATTCGCT 57.784 45.000 5.42 5.42 40.45 4.93
2129 4838 3.243401 CCATAAACCCTAGCCAAATTCGC 60.243 47.826 0.00 0.00 0.00 4.70
2130 4839 3.317993 CCCATAAACCCTAGCCAAATTCG 59.682 47.826 0.00 0.00 0.00 3.34
2131 4840 3.641436 CCCCATAAACCCTAGCCAAATTC 59.359 47.826 0.00 0.00 0.00 2.17
2132 4841 3.273618 TCCCCATAAACCCTAGCCAAATT 59.726 43.478 0.00 0.00 0.00 1.82
2133 4842 2.862597 TCCCCATAAACCCTAGCCAAAT 59.137 45.455 0.00 0.00 0.00 2.32
2134 4843 2.289467 TCCCCATAAACCCTAGCCAAA 58.711 47.619 0.00 0.00 0.00 3.28
2135 4844 1.988539 TCCCCATAAACCCTAGCCAA 58.011 50.000 0.00 0.00 0.00 4.52
2136 4845 1.850345 CTTCCCCATAAACCCTAGCCA 59.150 52.381 0.00 0.00 0.00 4.75
2137 4846 2.106684 CTCTTCCCCATAAACCCTAGCC 59.893 54.545 0.00 0.00 0.00 3.93
2138 4847 3.046374 TCTCTTCCCCATAAACCCTAGC 58.954 50.000 0.00 0.00 0.00 3.42
2139 4848 4.103311 CCTTCTCTTCCCCATAAACCCTAG 59.897 50.000 0.00 0.00 0.00 3.02
2140 4849 4.045022 CCTTCTCTTCCCCATAAACCCTA 58.955 47.826 0.00 0.00 0.00 3.53
2141 4850 2.853077 CCTTCTCTTCCCCATAAACCCT 59.147 50.000 0.00 0.00 0.00 4.34
2142 4851 2.091830 CCCTTCTCTTCCCCATAAACCC 60.092 54.545 0.00 0.00 0.00 4.11
2143 4852 2.091830 CCCCTTCTCTTCCCCATAAACC 60.092 54.545 0.00 0.00 0.00 3.27
2144 4853 2.850568 TCCCCTTCTCTTCCCCATAAAC 59.149 50.000 0.00 0.00 0.00 2.01
2145 4854 3.230143 TCCCCTTCTCTTCCCCATAAA 57.770 47.619 0.00 0.00 0.00 1.40
2146 4855 2.982842 TCCCCTTCTCTTCCCCATAA 57.017 50.000 0.00 0.00 0.00 1.90
2147 4856 2.760025 CGATCCCCTTCTCTTCCCCATA 60.760 54.545 0.00 0.00 0.00 2.74
2148 4857 1.826447 GATCCCCTTCTCTTCCCCAT 58.174 55.000 0.00 0.00 0.00 4.00
2149 4858 0.691078 CGATCCCCTTCTCTTCCCCA 60.691 60.000 0.00 0.00 0.00 4.96
2150 4859 1.411651 CCGATCCCCTTCTCTTCCCC 61.412 65.000 0.00 0.00 0.00 4.81
2151 4860 1.411651 CCCGATCCCCTTCTCTTCCC 61.412 65.000 0.00 0.00 0.00 3.97
2152 4861 0.398664 TCCCGATCCCCTTCTCTTCC 60.399 60.000 0.00 0.00 0.00 3.46
2153 4862 1.044611 CTCCCGATCCCCTTCTCTTC 58.955 60.000 0.00 0.00 0.00 2.87
2154 4863 0.399233 CCTCCCGATCCCCTTCTCTT 60.399 60.000 0.00 0.00 0.00 2.85
2155 4864 1.234529 CCTCCCGATCCCCTTCTCT 59.765 63.158 0.00 0.00 0.00 3.10
2156 4865 0.398664 TTCCTCCCGATCCCCTTCTC 60.399 60.000 0.00 0.00 0.00 2.87
2157 4866 0.399233 CTTCCTCCCGATCCCCTTCT 60.399 60.000 0.00 0.00 0.00 2.85
2158 4867 1.411651 CCTTCCTCCCGATCCCCTTC 61.412 65.000 0.00 0.00 0.00 3.46
2159 4868 1.384643 CCTTCCTCCCGATCCCCTT 60.385 63.158 0.00 0.00 0.00 3.95
2160 4869 2.287251 CCTTCCTCCCGATCCCCT 59.713 66.667 0.00 0.00 0.00 4.79
2161 4870 1.839296 CTCCTTCCTCCCGATCCCC 60.839 68.421 0.00 0.00 0.00 4.81
2162 4871 1.839296 CCTCCTTCCTCCCGATCCC 60.839 68.421 0.00 0.00 0.00 3.85
2163 4872 0.398664 TTCCTCCTTCCTCCCGATCC 60.399 60.000 0.00 0.00 0.00 3.36
2164 4873 1.044611 CTTCCTCCTTCCTCCCGATC 58.955 60.000 0.00 0.00 0.00 3.69
2165 4874 0.637195 TCTTCCTCCTTCCTCCCGAT 59.363 55.000 0.00 0.00 0.00 4.18
2166 4875 0.637195 ATCTTCCTCCTTCCTCCCGA 59.363 55.000 0.00 0.00 0.00 5.14
2167 4876 1.964933 GTATCTTCCTCCTTCCTCCCG 59.035 57.143 0.00 0.00 0.00 5.14
2168 4877 2.969262 CTGTATCTTCCTCCTTCCTCCC 59.031 54.545 0.00 0.00 0.00 4.30
2169 4878 2.969262 CCTGTATCTTCCTCCTTCCTCC 59.031 54.545 0.00 0.00 0.00 4.30
2170 4879 2.969262 CCCTGTATCTTCCTCCTTCCTC 59.031 54.545 0.00 0.00 0.00 3.71
2171 4880 2.360854 CCCCTGTATCTTCCTCCTTCCT 60.361 54.545 0.00 0.00 0.00 3.36
2172 4881 2.050918 CCCCTGTATCTTCCTCCTTCC 58.949 57.143 0.00 0.00 0.00 3.46
2173 4882 3.047695 TCCCCTGTATCTTCCTCCTTC 57.952 52.381 0.00 0.00 0.00 3.46
2174 4883 3.388913 CTTCCCCTGTATCTTCCTCCTT 58.611 50.000 0.00 0.00 0.00 3.36
2175 4884 2.360854 CCTTCCCCTGTATCTTCCTCCT 60.361 54.545 0.00 0.00 0.00 3.69
2176 4885 2.050918 CCTTCCCCTGTATCTTCCTCC 58.949 57.143 0.00 0.00 0.00 4.30
2177 4886 2.050918 CCCTTCCCCTGTATCTTCCTC 58.949 57.143 0.00 0.00 0.00 3.71
2178 4887 1.657162 TCCCTTCCCCTGTATCTTCCT 59.343 52.381 0.00 0.00 0.00 3.36
2179 4888 2.191981 TCCCTTCCCCTGTATCTTCC 57.808 55.000 0.00 0.00 0.00 3.46
2180 4889 3.265995 TGTTTCCCTTCCCCTGTATCTTC 59.734 47.826 0.00 0.00 0.00 2.87
2181 4890 3.265489 TGTTTCCCTTCCCCTGTATCTT 58.735 45.455 0.00 0.00 0.00 2.40
2182 4891 2.846827 CTGTTTCCCTTCCCCTGTATCT 59.153 50.000 0.00 0.00 0.00 1.98
2183 4892 2.092375 CCTGTTTCCCTTCCCCTGTATC 60.092 54.545 0.00 0.00 0.00 2.24
2184 4893 1.923148 CCTGTTTCCCTTCCCCTGTAT 59.077 52.381 0.00 0.00 0.00 2.29
2185 4894 1.368374 CCTGTTTCCCTTCCCCTGTA 58.632 55.000 0.00 0.00 0.00 2.74
2186 4895 1.435346 CCCTGTTTCCCTTCCCCTGT 61.435 60.000 0.00 0.00 0.00 4.00
2187 4896 1.140134 TCCCTGTTTCCCTTCCCCTG 61.140 60.000 0.00 0.00 0.00 4.45
2188 4897 0.846870 CTCCCTGTTTCCCTTCCCCT 60.847 60.000 0.00 0.00 0.00 4.79
2189 4898 0.845102 TCTCCCTGTTTCCCTTCCCC 60.845 60.000 0.00 0.00 0.00 4.81
2190 4899 1.004862 CTTCTCCCTGTTTCCCTTCCC 59.995 57.143 0.00 0.00 0.00 3.97
2191 4900 1.004862 CCTTCTCCCTGTTTCCCTTCC 59.995 57.143 0.00 0.00 0.00 3.46
2192 4901 1.705745 ACCTTCTCCCTGTTTCCCTTC 59.294 52.381 0.00 0.00 0.00 3.46
2193 4902 1.834540 ACCTTCTCCCTGTTTCCCTT 58.165 50.000 0.00 0.00 0.00 3.95
2194 4903 1.705745 GAACCTTCTCCCTGTTTCCCT 59.294 52.381 0.00 0.00 0.00 4.20
2195 4904 1.610886 CGAACCTTCTCCCTGTTTCCC 60.611 57.143 0.00 0.00 0.00 3.97
2196 4905 1.346722 TCGAACCTTCTCCCTGTTTCC 59.653 52.381 0.00 0.00 0.00 3.13
2197 4906 2.414806 GTCGAACCTTCTCCCTGTTTC 58.585 52.381 0.00 0.00 0.00 2.78
2198 4907 1.071857 GGTCGAACCTTCTCCCTGTTT 59.928 52.381 0.00 0.00 34.73 2.83
2199 4908 0.685660 GGTCGAACCTTCTCCCTGTT 59.314 55.000 0.00 0.00 34.73 3.16
2200 4909 0.471211 TGGTCGAACCTTCTCCCTGT 60.471 55.000 0.00 0.00 39.58 4.00
2201 4910 0.685097 TTGGTCGAACCTTCTCCCTG 59.315 55.000 0.00 0.00 39.58 4.45
2202 4911 0.685660 GTTGGTCGAACCTTCTCCCT 59.314 55.000 0.00 0.00 39.58 4.20
2203 4912 0.685660 AGTTGGTCGAACCTTCTCCC 59.314 55.000 0.00 0.00 39.58 4.30
2204 4913 2.298163 TGTAGTTGGTCGAACCTTCTCC 59.702 50.000 0.00 0.00 39.58 3.71
2205 4914 3.655276 TGTAGTTGGTCGAACCTTCTC 57.345 47.619 0.00 0.00 39.58 2.87
2206 4915 4.618920 ATTGTAGTTGGTCGAACCTTCT 57.381 40.909 0.00 0.00 39.58 2.85
2207 4916 4.153655 GGAATTGTAGTTGGTCGAACCTTC 59.846 45.833 0.00 0.00 39.58 3.46
2208 4917 4.070009 GGAATTGTAGTTGGTCGAACCTT 58.930 43.478 0.00 0.00 39.58 3.50
2209 4918 3.671716 GGAATTGTAGTTGGTCGAACCT 58.328 45.455 0.00 0.00 39.58 3.50
2210 4919 2.414138 CGGAATTGTAGTTGGTCGAACC 59.586 50.000 0.00 0.00 39.22 3.62
2211 4920 3.062042 ACGGAATTGTAGTTGGTCGAAC 58.938 45.455 0.00 0.00 34.40 3.95
2212 4921 3.061322 CACGGAATTGTAGTTGGTCGAA 58.939 45.455 0.00 0.00 0.00 3.71
2213 4922 2.679450 CACGGAATTGTAGTTGGTCGA 58.321 47.619 0.00 0.00 0.00 4.20
2214 4923 1.127951 GCACGGAATTGTAGTTGGTCG 59.872 52.381 0.00 0.00 0.00 4.79
2215 4924 1.467342 GGCACGGAATTGTAGTTGGTC 59.533 52.381 0.00 0.00 0.00 4.02
2216 4925 1.073284 AGGCACGGAATTGTAGTTGGT 59.927 47.619 0.00 0.00 0.00 3.67
2217 4926 1.737793 GAGGCACGGAATTGTAGTTGG 59.262 52.381 0.00 0.00 0.00 3.77
2218 4927 2.673368 GAGAGGCACGGAATTGTAGTTG 59.327 50.000 0.00 0.00 0.00 3.16
2219 4928 2.567615 AGAGAGGCACGGAATTGTAGTT 59.432 45.455 0.00 0.00 0.00 2.24
2220 4929 2.180276 AGAGAGGCACGGAATTGTAGT 58.820 47.619 0.00 0.00 0.00 2.73
2221 4930 2.969628 AGAGAGGCACGGAATTGTAG 57.030 50.000 0.00 0.00 0.00 2.74
2222 4931 3.362706 AGTAGAGAGGCACGGAATTGTA 58.637 45.455 0.00 0.00 0.00 2.41
2223 4932 2.166664 GAGTAGAGAGGCACGGAATTGT 59.833 50.000 0.00 0.00 0.00 2.71
2224 4933 2.796383 CGAGTAGAGAGGCACGGAATTG 60.796 54.545 0.00 0.00 0.00 2.32
2225 4934 1.405821 CGAGTAGAGAGGCACGGAATT 59.594 52.381 0.00 0.00 0.00 2.17
2226 4935 1.025812 CGAGTAGAGAGGCACGGAAT 58.974 55.000 0.00 0.00 0.00 3.01
2227 4936 0.035725 TCGAGTAGAGAGGCACGGAA 60.036 55.000 0.00 0.00 0.00 4.30
2228 4937 0.035725 TTCGAGTAGAGAGGCACGGA 60.036 55.000 0.00 0.00 0.00 4.69
2229 4938 0.099082 GTTCGAGTAGAGAGGCACGG 59.901 60.000 0.00 0.00 0.00 4.94
2230 4939 0.099082 GGTTCGAGTAGAGAGGCACG 59.901 60.000 0.00 0.00 0.00 5.34
2231 4940 0.456628 GGGTTCGAGTAGAGAGGCAC 59.543 60.000 0.00 0.00 0.00 5.01
2232 4941 1.030488 CGGGTTCGAGTAGAGAGGCA 61.030 60.000 0.00 0.00 39.00 4.75
2233 4942 1.726533 CCGGGTTCGAGTAGAGAGGC 61.727 65.000 0.00 0.00 39.00 4.70
2234 4943 1.102222 CCCGGGTTCGAGTAGAGAGG 61.102 65.000 14.18 0.00 39.00 3.69
2235 4944 0.394080 ACCCGGGTTCGAGTAGAGAG 60.394 60.000 24.16 0.00 39.00 3.20
2236 4945 0.393537 GACCCGGGTTCGAGTAGAGA 60.394 60.000 30.89 0.00 39.00 3.10
2237 4946 1.382692 GGACCCGGGTTCGAGTAGAG 61.383 65.000 30.89 0.00 39.00 2.43
2238 4947 1.379044 GGACCCGGGTTCGAGTAGA 60.379 63.158 30.89 0.00 39.00 2.59
2239 4948 1.041447 ATGGACCCGGGTTCGAGTAG 61.041 60.000 30.89 0.00 39.00 2.57
2240 4949 0.615544 AATGGACCCGGGTTCGAGTA 60.616 55.000 30.89 10.42 39.00 2.59
2241 4950 1.486145 AAATGGACCCGGGTTCGAGT 61.486 55.000 30.89 13.42 39.00 4.18
2242 4951 0.538118 TAAATGGACCCGGGTTCGAG 59.462 55.000 30.89 0.00 39.00 4.04
2243 4952 0.982704 TTAAATGGACCCGGGTTCGA 59.017 50.000 30.89 17.16 39.00 3.71
2244 4953 1.089112 GTTAAATGGACCCGGGTTCG 58.911 55.000 30.89 0.00 0.00 3.95
2245 4954 1.466856 GGTTAAATGGACCCGGGTTC 58.533 55.000 30.89 28.67 0.00 3.62
2246 4955 0.040058 GGGTTAAATGGACCCGGGTT 59.960 55.000 30.89 14.62 46.71 4.11
2247 4956 1.693034 GGGTTAAATGGACCCGGGT 59.307 57.895 30.81 30.81 46.71 5.28
2248 4957 4.670199 GGGTTAAATGGACCCGGG 57.330 61.111 22.25 22.25 46.71 5.73
2252 4961 2.124277 AGCGAAGGGTTAAATGGACC 57.876 50.000 0.00 0.00 36.41 4.46
2253 4962 3.602483 TGTAGCGAAGGGTTAAATGGAC 58.398 45.455 0.00 0.00 0.00 4.02
2254 4963 3.985019 TGTAGCGAAGGGTTAAATGGA 57.015 42.857 0.00 0.00 0.00 3.41
2255 4964 4.451900 AGATGTAGCGAAGGGTTAAATGG 58.548 43.478 0.00 0.00 0.00 3.16
2256 4965 4.511826 GGAGATGTAGCGAAGGGTTAAATG 59.488 45.833 0.00 0.00 0.00 2.32
2257 4966 4.444449 GGGAGATGTAGCGAAGGGTTAAAT 60.444 45.833 0.00 0.00 0.00 1.40
2258 4967 3.118519 GGGAGATGTAGCGAAGGGTTAAA 60.119 47.826 0.00 0.00 0.00 1.52
2259 4968 2.433239 GGGAGATGTAGCGAAGGGTTAA 59.567 50.000 0.00 0.00 0.00 2.01
2260 4969 2.037144 GGGAGATGTAGCGAAGGGTTA 58.963 52.381 0.00 0.00 0.00 2.85
2261 4970 0.831307 GGGAGATGTAGCGAAGGGTT 59.169 55.000 0.00 0.00 0.00 4.11
2262 4971 0.325296 TGGGAGATGTAGCGAAGGGT 60.325 55.000 0.00 0.00 0.00 4.34
2263 4972 0.830648 TTGGGAGATGTAGCGAAGGG 59.169 55.000 0.00 0.00 0.00 3.95
2264 4973 1.482593 ACTTGGGAGATGTAGCGAAGG 59.517 52.381 0.00 0.00 0.00 3.46
2265 4974 2.796383 CGACTTGGGAGATGTAGCGAAG 60.796 54.545 0.00 0.00 0.00 3.79
2266 4975 1.134367 CGACTTGGGAGATGTAGCGAA 59.866 52.381 0.00 0.00 0.00 4.70
2267 4976 0.738975 CGACTTGGGAGATGTAGCGA 59.261 55.000 0.00 0.00 0.00 4.93
2268 4977 0.738975 TCGACTTGGGAGATGTAGCG 59.261 55.000 0.00 0.00 0.00 4.26
2269 4978 1.534175 CGTCGACTTGGGAGATGTAGC 60.534 57.143 14.70 0.00 0.00 3.58
2270 4979 1.065701 CCGTCGACTTGGGAGATGTAG 59.934 57.143 14.70 0.00 0.00 2.74
2271 4980 1.100510 CCGTCGACTTGGGAGATGTA 58.899 55.000 14.70 0.00 0.00 2.29
2272 4981 1.890894 CCGTCGACTTGGGAGATGT 59.109 57.895 14.70 0.00 0.00 3.06
2273 4982 4.814900 CCGTCGACTTGGGAGATG 57.185 61.111 14.70 0.00 0.00 2.90
2286 4995 1.593296 AACAGGCTCTACGACCCGTC 61.593 60.000 0.00 0.00 41.54 4.79
2287 4996 1.605738 AACAGGCTCTACGACCCGT 60.606 57.895 0.00 0.00 44.35 5.28
2288 4997 1.153823 CAACAGGCTCTACGACCCG 60.154 63.158 0.00 0.00 0.00 5.28
2289 4998 1.218316 CCAACAGGCTCTACGACCC 59.782 63.158 0.00 0.00 0.00 4.46
2290 4999 1.218316 CCCAACAGGCTCTACGACC 59.782 63.158 0.00 0.00 0.00 4.79
2291 5000 4.913126 CCCAACAGGCTCTACGAC 57.087 61.111 0.00 0.00 0.00 4.34
2301 5010 3.741476 GAGCAAGCGGCCCAACAG 61.741 66.667 0.00 0.00 46.50 3.16
2304 5013 4.722700 GAGGAGCAAGCGGCCCAA 62.723 66.667 0.00 0.00 46.50 4.12
2306 5015 4.416738 AAGAGGAGCAAGCGGCCC 62.417 66.667 0.00 2.01 46.50 5.80
2307 5016 3.130160 CAAGAGGAGCAAGCGGCC 61.130 66.667 0.00 0.00 46.50 6.13
2308 5017 3.130160 CCAAGAGGAGCAAGCGGC 61.130 66.667 0.00 0.00 45.30 6.53
2309 5018 2.437359 CCCAAGAGGAGCAAGCGG 60.437 66.667 0.00 0.00 38.24 5.52
2310 5019 3.130160 GCCCAAGAGGAGCAAGCG 61.130 66.667 0.00 0.00 38.24 4.68
2311 5020 2.753446 GGCCCAAGAGGAGCAAGC 60.753 66.667 0.00 0.00 38.24 4.01
2312 5021 2.437359 CGGCCCAAGAGGAGCAAG 60.437 66.667 0.00 0.00 38.24 4.01
2313 5022 3.249189 ACGGCCCAAGAGGAGCAA 61.249 61.111 0.00 0.00 38.24 3.91
2314 5023 3.706373 GACGGCCCAAGAGGAGCA 61.706 66.667 0.00 0.00 38.24 4.26
2315 5024 4.475135 GGACGGCCCAAGAGGAGC 62.475 72.222 0.00 0.00 38.24 4.70
2316 5025 4.148825 CGGACGGCCCAAGAGGAG 62.149 72.222 0.00 0.00 38.24 3.69
2319 5028 4.760047 CACCGGACGGCCCAAGAG 62.760 72.222 9.46 0.00 39.32 2.85
2336 5045 4.537433 CTAGAGCCCACCAGCGCC 62.537 72.222 2.29 0.00 38.01 6.53
2337 5046 3.438017 CTCTAGAGCCCACCAGCGC 62.438 68.421 6.86 0.00 38.01 5.92
2338 5047 2.790791 CCTCTAGAGCCCACCAGCG 61.791 68.421 14.73 0.00 38.01 5.18
2339 5048 2.439104 CCCTCTAGAGCCCACCAGC 61.439 68.421 14.73 0.00 0.00 4.85
2340 5049 1.045911 GTCCCTCTAGAGCCCACCAG 61.046 65.000 14.73 0.00 0.00 4.00
2341 5050 1.001760 GTCCCTCTAGAGCCCACCA 59.998 63.158 14.73 0.00 0.00 4.17
2342 5051 1.045911 CAGTCCCTCTAGAGCCCACC 61.046 65.000 14.73 0.16 0.00 4.61
2343 5052 1.681486 GCAGTCCCTCTAGAGCCCAC 61.681 65.000 14.73 9.63 0.00 4.61
2344 5053 1.381872 GCAGTCCCTCTAGAGCCCA 60.382 63.158 14.73 0.00 0.00 5.36
2345 5054 1.075600 AGCAGTCCCTCTAGAGCCC 60.076 63.158 14.73 4.00 0.00 5.19
2346 5055 0.396417 TCAGCAGTCCCTCTAGAGCC 60.396 60.000 14.73 4.36 0.00 4.70
2347 5056 0.744281 GTCAGCAGTCCCTCTAGAGC 59.256 60.000 14.73 2.62 0.00 4.09
2348 5057 1.021202 CGTCAGCAGTCCCTCTAGAG 58.979 60.000 13.18 13.18 0.00 2.43
2349 5058 0.328592 ACGTCAGCAGTCCCTCTAGA 59.671 55.000 0.00 0.00 0.00 2.43
2350 5059 1.944024 CTACGTCAGCAGTCCCTCTAG 59.056 57.143 0.00 0.00 0.00 2.43
2351 5060 1.281287 ACTACGTCAGCAGTCCCTCTA 59.719 52.381 0.00 0.00 0.00 2.43
2352 5061 0.038455 ACTACGTCAGCAGTCCCTCT 59.962 55.000 0.00 0.00 0.00 3.69
2353 5062 1.671845 CTACTACGTCAGCAGTCCCTC 59.328 57.143 0.00 0.00 0.00 4.30
2354 5063 1.682394 CCTACTACGTCAGCAGTCCCT 60.682 57.143 0.00 0.00 0.00 4.20
2355 5064 0.739561 CCTACTACGTCAGCAGTCCC 59.260 60.000 0.00 0.00 0.00 4.46
2356 5065 0.739561 CCCTACTACGTCAGCAGTCC 59.260 60.000 0.00 0.00 0.00 3.85
2357 5066 0.100861 GCCCTACTACGTCAGCAGTC 59.899 60.000 0.00 0.00 0.00 3.51
2358 5067 1.321074 GGCCCTACTACGTCAGCAGT 61.321 60.000 0.00 0.00 0.00 4.40
2359 5068 1.437986 GGCCCTACTACGTCAGCAG 59.562 63.158 0.00 0.00 0.00 4.24
2360 5069 2.056223 GGGCCCTACTACGTCAGCA 61.056 63.158 17.04 0.00 0.00 4.41
2361 5070 2.813200 GGGCCCTACTACGTCAGC 59.187 66.667 17.04 0.00 0.00 4.26
2362 5071 1.751927 ACGGGCCCTACTACGTCAG 60.752 63.158 22.43 1.74 33.92 3.51
2363 5072 2.048023 CACGGGCCCTACTACGTCA 61.048 63.158 22.43 0.00 37.48 4.35
2364 5073 1.750399 TCACGGGCCCTACTACGTC 60.750 63.158 22.43 0.00 37.48 4.34
2365 5074 2.048603 GTCACGGGCCCTACTACGT 61.049 63.158 22.43 8.64 40.60 3.57
2366 5075 1.389609 ATGTCACGGGCCCTACTACG 61.390 60.000 22.43 7.88 0.00 3.51
2367 5076 0.388294 GATGTCACGGGCCCTACTAC 59.612 60.000 22.43 13.06 0.00 2.73
2368 5077 0.757935 GGATGTCACGGGCCCTACTA 60.758 60.000 22.43 2.26 0.00 1.82
2369 5078 2.064581 GGATGTCACGGGCCCTACT 61.065 63.158 22.43 0.00 0.00 2.57
2370 5079 2.504519 GGATGTCACGGGCCCTAC 59.495 66.667 22.43 15.72 0.00 3.18
2371 5080 2.766651 GGGATGTCACGGGCCCTA 60.767 66.667 22.43 1.45 37.59 3.53
2387 5096 0.743345 CCGCGTCTAAAGAAAGGGGG 60.743 60.000 4.92 4.60 35.19 5.40
2388 5097 1.366854 GCCGCGTCTAAAGAAAGGGG 61.367 60.000 4.92 12.53 38.85 4.79
2389 5098 0.391263 AGCCGCGTCTAAAGAAAGGG 60.391 55.000 4.92 0.00 0.00 3.95
2390 5099 1.128692 CAAGCCGCGTCTAAAGAAAGG 59.871 52.381 4.92 0.00 0.00 3.11
2391 5100 1.798813 ACAAGCCGCGTCTAAAGAAAG 59.201 47.619 4.92 0.00 0.00 2.62
2392 5101 1.796459 GACAAGCCGCGTCTAAAGAAA 59.204 47.619 4.92 0.00 0.00 2.52
2393 5102 1.425412 GACAAGCCGCGTCTAAAGAA 58.575 50.000 4.92 0.00 0.00 2.52
2394 5103 0.389426 GGACAAGCCGCGTCTAAAGA 60.389 55.000 4.92 0.00 33.73 2.52
2395 5104 1.359459 GGGACAAGCCGCGTCTAAAG 61.359 60.000 4.92 0.00 37.63 1.85
2396 5105 1.375013 GGGACAAGCCGCGTCTAAA 60.375 57.895 4.92 0.00 37.63 1.85
2397 5106 2.263540 GGGACAAGCCGCGTCTAA 59.736 61.111 4.92 0.00 37.63 2.10
2398 5107 3.766691 GGGGACAAGCCGCGTCTA 61.767 66.667 4.92 0.00 40.06 2.59
2420 5129 3.777925 CGTTTCCGAGGTGCTGCG 61.778 66.667 0.00 0.00 35.63 5.18
2421 5130 3.423154 CCGTTTCCGAGGTGCTGC 61.423 66.667 0.00 0.00 35.63 5.25
2422 5131 3.423154 GCCGTTTCCGAGGTGCTG 61.423 66.667 0.00 0.00 35.63 4.41
2423 5132 3.178540 AAGCCGTTTCCGAGGTGCT 62.179 57.895 0.00 0.00 35.63 4.40
2424 5133 2.668550 AAGCCGTTTCCGAGGTGC 60.669 61.111 0.00 0.00 35.63 5.01
2425 5134 1.004918 AGAAGCCGTTTCCGAGGTG 60.005 57.895 0.00 0.00 36.40 4.00
2426 5135 1.004918 CAGAAGCCGTTTCCGAGGT 60.005 57.895 0.00 0.00 36.40 3.85
2427 5136 0.737715 CTCAGAAGCCGTTTCCGAGG 60.738 60.000 1.29 0.00 36.90 4.63
2428 5137 1.355066 GCTCAGAAGCCGTTTCCGAG 61.355 60.000 4.32 4.32 43.10 4.63
2429 5138 1.374252 GCTCAGAAGCCGTTTCCGA 60.374 57.895 0.00 0.00 43.10 4.55
2430 5139 3.169198 GCTCAGAAGCCGTTTCCG 58.831 61.111 0.00 0.00 43.10 4.30
2439 5148 4.111916 GAGGATTTCTTCGAGCTCAGAAG 58.888 47.826 27.79 27.79 44.65 2.85
2440 5149 3.118956 GGAGGATTTCTTCGAGCTCAGAA 60.119 47.826 15.40 13.14 0.00 3.02
2441 5150 2.428890 GGAGGATTTCTTCGAGCTCAGA 59.571 50.000 15.40 7.12 0.00 3.27
2442 5151 2.482839 GGGAGGATTTCTTCGAGCTCAG 60.483 54.545 15.40 4.49 0.00 3.35
2443 5152 1.482593 GGGAGGATTTCTTCGAGCTCA 59.517 52.381 15.40 0.00 0.00 4.26
2444 5153 1.482593 TGGGAGGATTTCTTCGAGCTC 59.517 52.381 2.73 2.73 0.00 4.09
2445 5154 1.573108 TGGGAGGATTTCTTCGAGCT 58.427 50.000 0.00 0.00 0.00 4.09
2446 5155 2.158900 TCATGGGAGGATTTCTTCGAGC 60.159 50.000 0.00 0.00 0.00 5.03
2447 5156 3.827008 TCATGGGAGGATTTCTTCGAG 57.173 47.619 0.00 0.00 0.00 4.04
2448 5157 3.745480 GCATCATGGGAGGATTTCTTCGA 60.745 47.826 0.00 0.00 0.00 3.71
2449 5158 2.551459 GCATCATGGGAGGATTTCTTCG 59.449 50.000 0.00 0.00 0.00 3.79
2450 5159 2.889678 GGCATCATGGGAGGATTTCTTC 59.110 50.000 0.00 0.00 0.00 2.87
2451 5160 2.245546 TGGCATCATGGGAGGATTTCTT 59.754 45.455 0.00 0.00 0.00 2.52
2452 5161 1.854939 TGGCATCATGGGAGGATTTCT 59.145 47.619 0.00 0.00 0.00 2.52
2453 5162 2.236766 CTGGCATCATGGGAGGATTTC 58.763 52.381 0.00 0.00 0.00 2.17
2454 5163 1.756690 GCTGGCATCATGGGAGGATTT 60.757 52.381 0.00 0.00 0.00 2.17
2455 5164 0.178970 GCTGGCATCATGGGAGGATT 60.179 55.000 0.00 0.00 0.00 3.01
2456 5165 1.459369 GCTGGCATCATGGGAGGAT 59.541 57.895 0.00 0.00 0.00 3.24
2457 5166 2.921435 GCTGGCATCATGGGAGGA 59.079 61.111 0.00 0.00 0.00 3.71
2458 5167 2.593725 CGCTGGCATCATGGGAGG 60.594 66.667 0.00 0.00 0.00 4.30
2459 5168 3.285215 GCGCTGGCATCATGGGAG 61.285 66.667 0.00 0.00 39.62 4.30
2460 5169 3.348554 AAGCGCTGGCATCATGGGA 62.349 57.895 12.58 0.00 43.41 4.37
2461 5170 2.831742 AAGCGCTGGCATCATGGG 60.832 61.111 12.58 0.00 43.41 4.00
2462 5171 2.719979 GAAGCGCTGGCATCATGG 59.280 61.111 12.58 0.00 43.41 3.66
2463 5172 2.719979 GGAAGCGCTGGCATCATG 59.280 61.111 12.58 0.00 43.41 3.07
2464 5173 2.898840 CGGAAGCGCTGGCATCAT 60.899 61.111 12.58 0.00 43.41 2.45
2475 5184 2.507324 GTCGTCTCAGCCGGAAGC 60.507 66.667 5.05 0.00 44.25 3.86
2476 5185 1.949847 ATGGTCGTCTCAGCCGGAAG 61.950 60.000 5.05 0.00 0.00 3.46
2477 5186 1.541310 AATGGTCGTCTCAGCCGGAA 61.541 55.000 5.05 0.00 0.00 4.30
2478 5187 1.541310 AAATGGTCGTCTCAGCCGGA 61.541 55.000 5.05 0.00 0.00 5.14
2479 5188 1.079127 AAATGGTCGTCTCAGCCGG 60.079 57.895 0.00 0.00 0.00 6.13
2480 5189 0.389817 TCAAATGGTCGTCTCAGCCG 60.390 55.000 0.00 0.00 0.00 5.52
2481 5190 1.936547 GATCAAATGGTCGTCTCAGCC 59.063 52.381 0.00 0.00 0.00 4.85
2482 5191 2.621338 TGATCAAATGGTCGTCTCAGC 58.379 47.619 0.00 0.00 0.00 4.26
2483 5192 3.996363 TGTTGATCAAATGGTCGTCTCAG 59.004 43.478 10.35 0.00 0.00 3.35
2484 5193 3.745975 GTGTTGATCAAATGGTCGTCTCA 59.254 43.478 10.35 0.00 0.00 3.27
2485 5194 3.997021 AGTGTTGATCAAATGGTCGTCTC 59.003 43.478 10.35 0.00 0.00 3.36
2486 5195 4.008074 AGTGTTGATCAAATGGTCGTCT 57.992 40.909 10.35 0.00 0.00 4.18
2487 5196 4.466828 CAAGTGTTGATCAAATGGTCGTC 58.533 43.478 10.35 0.00 0.00 4.20
2488 5197 3.253188 CCAAGTGTTGATCAAATGGTCGT 59.747 43.478 10.35 0.00 32.62 4.34
2489 5198 3.366273 CCCAAGTGTTGATCAAATGGTCG 60.366 47.826 10.35 2.07 34.30 4.79
2490 5199 3.056607 CCCCAAGTGTTGATCAAATGGTC 60.057 47.826 10.35 0.00 34.30 4.02
2491 5200 2.899256 CCCCAAGTGTTGATCAAATGGT 59.101 45.455 10.35 0.00 34.30 3.55
2492 5201 2.234414 CCCCCAAGTGTTGATCAAATGG 59.766 50.000 10.35 15.07 35.25 3.16
2493 5202 3.164268 TCCCCCAAGTGTTGATCAAATG 58.836 45.455 10.35 7.20 0.00 2.32
2494 5203 3.541242 TCCCCCAAGTGTTGATCAAAT 57.459 42.857 10.35 0.00 0.00 2.32
2495 5204 3.075882 AGATCCCCCAAGTGTTGATCAAA 59.924 43.478 10.35 0.00 35.42 2.69
2496 5205 2.649312 AGATCCCCCAAGTGTTGATCAA 59.351 45.455 3.38 3.38 35.42 2.57
2497 5206 2.278245 AGATCCCCCAAGTGTTGATCA 58.722 47.619 0.00 0.00 35.42 2.92
2498 5207 3.282885 GAAGATCCCCCAAGTGTTGATC 58.717 50.000 0.00 0.00 33.63 2.92
2499 5208 2.356125 CGAAGATCCCCCAAGTGTTGAT 60.356 50.000 0.00 0.00 0.00 2.57
2500 5209 1.003118 CGAAGATCCCCCAAGTGTTGA 59.997 52.381 0.00 0.00 0.00 3.18
2501 5210 1.003118 TCGAAGATCCCCCAAGTGTTG 59.997 52.381 0.00 0.00 0.00 3.33
2502 5211 1.279271 CTCGAAGATCCCCCAAGTGTT 59.721 52.381 0.00 0.00 33.89 3.32
2503 5212 0.905357 CTCGAAGATCCCCCAAGTGT 59.095 55.000 0.00 0.00 33.89 3.55
2504 5213 0.905357 ACTCGAAGATCCCCCAAGTG 59.095 55.000 0.00 0.00 33.89 3.16
2505 5214 1.279271 CAACTCGAAGATCCCCCAAGT 59.721 52.381 0.00 0.00 33.89 3.16
2506 5215 2.014068 GCAACTCGAAGATCCCCCAAG 61.014 57.143 0.00 0.00 33.89 3.61
2507 5216 0.035439 GCAACTCGAAGATCCCCCAA 60.035 55.000 0.00 0.00 33.89 4.12
2508 5217 1.602237 GCAACTCGAAGATCCCCCA 59.398 57.895 0.00 0.00 33.89 4.96
2509 5218 1.153147 GGCAACTCGAAGATCCCCC 60.153 63.158 0.00 0.00 33.89 5.40
2510 5219 1.153147 GGGCAACTCGAAGATCCCC 60.153 63.158 0.00 0.00 33.89 4.81
2511 5220 0.253327 AAGGGCAACTCGAAGATCCC 59.747 55.000 4.75 4.75 33.89 3.85
2512 5221 1.373570 CAAGGGCAACTCGAAGATCC 58.626 55.000 0.00 0.00 33.89 3.36
2513 5222 1.339151 ACCAAGGGCAACTCGAAGATC 60.339 52.381 0.00 0.00 33.89 2.75
2514 5223 0.693049 ACCAAGGGCAACTCGAAGAT 59.307 50.000 0.00 0.00 33.89 2.40
2515 5224 1.344065 TACCAAGGGCAACTCGAAGA 58.656 50.000 0.00 0.00 0.00 2.87
2516 5225 2.178912 TTACCAAGGGCAACTCGAAG 57.821 50.000 0.00 0.00 0.00 3.79
2517 5226 2.039216 TGATTACCAAGGGCAACTCGAA 59.961 45.455 0.00 0.00 0.00 3.71
2518 5227 1.626321 TGATTACCAAGGGCAACTCGA 59.374 47.619 0.00 0.00 0.00 4.04
2519 5228 2.009774 CTGATTACCAAGGGCAACTCG 58.990 52.381 0.00 0.00 0.00 4.18
2520 5229 3.010420 GTCTGATTACCAAGGGCAACTC 58.990 50.000 0.00 0.00 0.00 3.01
2521 5230 2.615493 CGTCTGATTACCAAGGGCAACT 60.615 50.000 0.00 0.00 0.00 3.16
2522 5231 1.737793 CGTCTGATTACCAAGGGCAAC 59.262 52.381 0.00 0.00 0.00 4.17
2523 5232 1.948611 GCGTCTGATTACCAAGGGCAA 60.949 52.381 0.00 0.00 0.00 4.52
2524 5233 0.392461 GCGTCTGATTACCAAGGGCA 60.392 55.000 0.00 0.00 0.00 5.36
2525 5234 1.095807 GGCGTCTGATTACCAAGGGC 61.096 60.000 0.00 0.00 0.00 5.19
2526 5235 0.541863 AGGCGTCTGATTACCAAGGG 59.458 55.000 0.00 0.00 0.00 3.95
2527 5236 1.066143 ACAGGCGTCTGATTACCAAGG 60.066 52.381 26.48 0.00 43.49 3.61
2528 5237 2.271800 GACAGGCGTCTGATTACCAAG 58.728 52.381 26.48 0.00 43.49 3.61
2529 5238 1.066430 GGACAGGCGTCTGATTACCAA 60.066 52.381 26.48 0.00 43.49 3.67
2530 5239 0.535335 GGACAGGCGTCTGATTACCA 59.465 55.000 26.48 0.00 43.49 3.25
2531 5240 0.535335 TGGACAGGCGTCTGATTACC 59.465 55.000 26.48 19.67 43.49 2.85
2532 5241 1.927895 CTGGACAGGCGTCTGATTAC 58.072 55.000 26.48 10.79 43.49 1.89
2533 5242 0.175760 GCTGGACAGGCGTCTGATTA 59.824 55.000 26.48 7.84 43.49 1.75
2534 5243 1.078848 GCTGGACAGGCGTCTGATT 60.079 57.895 26.48 0.61 43.49 2.57
2535 5244 2.285773 TGCTGGACAGGCGTCTGAT 61.286 57.895 26.48 8.04 43.49 2.90
2536 5245 2.917227 TGCTGGACAGGCGTCTGA 60.917 61.111 26.48 0.00 43.49 3.27
2537 5246 2.740055 GTGCTGGACAGGCGTCTG 60.740 66.667 17.12 17.12 46.10 3.51
2538 5247 4.008933 GGTGCTGGACAGGCGTCT 62.009 66.667 0.77 0.00 42.21 4.18
2539 5248 3.537206 AAGGTGCTGGACAGGCGTC 62.537 63.158 0.77 1.63 41.80 5.19
2540 5249 3.537206 GAAGGTGCTGGACAGGCGT 62.537 63.158 0.77 0.00 0.00 5.68
2541 5250 2.743928 GAAGGTGCTGGACAGGCG 60.744 66.667 0.77 0.00 0.00 5.52
2542 5251 1.376553 GAGAAGGTGCTGGACAGGC 60.377 63.158 0.77 0.00 0.00 4.85
2543 5252 1.298014 GGAGAAGGTGCTGGACAGG 59.702 63.158 0.77 0.00 0.00 4.00
2544 5253 1.079543 CGGAGAAGGTGCTGGACAG 60.080 63.158 0.77 0.00 0.00 3.51
2545 5254 2.583441 CCGGAGAAGGTGCTGGACA 61.583 63.158 0.00 0.00 32.05 4.02
2546 5255 1.827399 TTCCGGAGAAGGTGCTGGAC 61.827 60.000 3.34 0.00 39.21 4.02
2547 5256 1.125093 TTTCCGGAGAAGGTGCTGGA 61.125 55.000 3.34 0.00 37.78 3.86
2548 5257 0.674895 CTTTCCGGAGAAGGTGCTGG 60.675 60.000 3.34 0.00 32.35 4.85
2549 5258 0.035458 ACTTTCCGGAGAAGGTGCTG 59.965 55.000 22.22 3.27 40.51 4.41
2550 5259 0.321996 GACTTTCCGGAGAAGGTGCT 59.678 55.000 22.22 8.34 41.95 4.40
2551 5260 0.321996 AGACTTTCCGGAGAAGGTGC 59.678 55.000 22.22 14.48 41.95 5.01
2552 5261 1.338200 CCAGACTTTCCGGAGAAGGTG 60.338 57.143 22.22 18.83 41.95 4.00
2553 5262 0.977395 CCAGACTTTCCGGAGAAGGT 59.023 55.000 22.22 10.20 44.34 3.50
2554 5263 0.391793 GCCAGACTTTCCGGAGAAGG 60.392 60.000 22.22 14.00 35.30 3.46
2555 5264 0.737715 CGCCAGACTTTCCGGAGAAG 60.738 60.000 18.85 18.85 32.35 2.85
2556 5265 1.292223 CGCCAGACTTTCCGGAGAA 59.708 57.895 3.34 1.40 0.00 2.87
2557 5266 2.646175 CCGCCAGACTTTCCGGAGA 61.646 63.158 3.34 0.00 43.20 3.71
2558 5267 2.125512 CCGCCAGACTTTCCGGAG 60.126 66.667 3.34 0.00 43.20 4.63
2559 5268 2.602267 TCCGCCAGACTTTCCGGA 60.602 61.111 0.00 0.00 46.50 5.14
2560 5269 2.125512 CTCCGCCAGACTTTCCGG 60.126 66.667 0.00 0.00 41.97 5.14
2561 5270 2.970639 TCTCCGCCAGACTTTCCG 59.029 61.111 0.00 0.00 0.00 4.30


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.