Multiple sequence alignment - TraesCS2B01G273900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G273900 chr2B 100.000 3077 0 0 1 3077 375543724 375546800 0.000000e+00 5683.0
1 TraesCS2B01G273900 chr2A 98.163 2558 39 2 1 2558 219148072 219150621 0.000000e+00 4457.0
2 TraesCS2B01G273900 chr2D 97.998 2548 32 9 1 2538 199355348 199357886 0.000000e+00 4405.0
3 TraesCS2B01G273900 chr3A 85.417 336 38 7 2742 3076 363406929 363407254 3.800000e-89 339.0
4 TraesCS2B01G273900 chr3B 85.285 333 35 10 2750 3077 323463350 323463673 6.360000e-87 331.0
5 TraesCS2B01G273900 chr5B 86.288 299 35 3 2756 3054 538286590 538286882 1.380000e-83 320.0
6 TraesCS2B01G273900 chr5A 87.633 283 22 8 2751 3026 622397330 622397054 1.780000e-82 316.0
7 TraesCS2B01G273900 chr4A 84.524 336 34 16 2747 3074 66160737 66161062 1.780000e-82 316.0
8 TraesCS2B01G273900 chr4A 83.234 334 39 16 2748 3074 66324320 66324643 1.080000e-74 291.0
9 TraesCS2B01G273900 chr5D 85.619 299 35 5 2756 3054 442088061 442088351 1.070000e-79 307.0
10 TraesCS2B01G273900 chr5D 84.395 314 35 12 2748 3058 498181642 498181340 2.320000e-76 296.0
11 TraesCS2B01G273900 chr4D 84.395 314 35 12 2747 3055 254868569 254868265 2.320000e-76 296.0
12 TraesCS2B01G273900 chr1D 96.774 31 1 0 937 967 397180285 397180255 6.000000e-03 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G273900 chr2B 375543724 375546800 3076 False 5683 5683 100.000 1 3077 1 chr2B.!!$F1 3076
1 TraesCS2B01G273900 chr2A 219148072 219150621 2549 False 4457 4457 98.163 1 2558 1 chr2A.!!$F1 2557
2 TraesCS2B01G273900 chr2D 199355348 199357886 2538 False 4405 4405 97.998 1 2538 1 chr2D.!!$F1 2537

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
456 458 1.422161 AACCAAGAGCCTCAGCCTGT 61.422 55.000 0.0 0.0 41.25 4.00 F
1059 1064 2.113774 CTTGCCAGCACCTCCACA 59.886 61.111 0.0 0.0 0.00 4.17 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1407 1415 2.060383 CCTGAGGTCCTCCATGCGA 61.060 63.158 16.6 0.0 35.89 5.10 R
2905 2918 0.030638 CGTTTGCCCTCTTGTGTTGG 59.969 55.000 0.0 0.0 0.00 3.77 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
288 290 4.870123 TGCTGCTTGATTGGTTAATTGT 57.130 36.364 0.00 0.00 0.00 2.71
409 411 2.893489 GTGCAGTGGAAGAAGGGATTTT 59.107 45.455 0.00 0.00 0.00 1.82
456 458 1.422161 AACCAAGAGCCTCAGCCTGT 61.422 55.000 0.00 0.00 41.25 4.00
474 476 4.384647 GCCTGTTGACTGATTAGGAGGATT 60.385 45.833 0.00 0.00 0.00 3.01
1059 1064 2.113774 CTTGCCAGCACCTCCACA 59.886 61.111 0.00 0.00 0.00 4.17
1185 1193 3.984193 GATGAAGCTGGTGGCCGCT 62.984 63.158 17.49 6.65 43.05 5.52
1407 1415 2.985456 CTCAAGAAGGCCGAGGCT 59.015 61.111 14.33 0.00 41.24 4.58
2357 2370 4.027437 AGAAACTCTAGTGAGATGGTCCC 58.973 47.826 0.00 0.00 42.73 4.46
2531 2544 2.404265 TGTTCATTCGCTTGCTTGTG 57.596 45.000 0.00 0.00 0.00 3.33
2561 2574 2.809601 GTGTAGCCACTCGCCACG 60.810 66.667 0.00 0.00 38.61 4.94
2562 2575 2.986979 TGTAGCCACTCGCCACGA 60.987 61.111 0.00 0.00 38.78 4.35
2563 2576 2.260434 GTAGCCACTCGCCACGAA 59.740 61.111 0.00 0.00 38.78 3.85
2564 2577 2.092882 GTAGCCACTCGCCACGAAC 61.093 63.158 0.00 0.00 38.78 3.95
2565 2578 2.566570 TAGCCACTCGCCACGAACA 61.567 57.895 0.00 0.00 38.78 3.18
2566 2579 2.089887 TAGCCACTCGCCACGAACAA 62.090 55.000 0.00 0.00 38.78 2.83
2567 2580 2.935955 CCACTCGCCACGAACAAC 59.064 61.111 0.00 0.00 34.74 3.32
2569 2582 1.947146 CACTCGCCACGAACAACGA 60.947 57.895 0.00 0.00 45.77 3.85
2570 2583 1.227031 ACTCGCCACGAACAACGAA 60.227 52.632 0.00 0.00 45.77 3.85
2571 2584 0.806884 ACTCGCCACGAACAACGAAA 60.807 50.000 0.00 0.00 45.77 3.46
2572 2585 0.511221 CTCGCCACGAACAACGAAAT 59.489 50.000 0.00 0.00 45.77 2.17
2573 2586 0.509499 TCGCCACGAACAACGAAATC 59.491 50.000 0.00 0.00 45.77 2.17
2574 2587 0.511221 CGCCACGAACAACGAAATCT 59.489 50.000 0.00 0.00 45.77 2.40
2575 2588 1.722464 CGCCACGAACAACGAAATCTA 59.278 47.619 0.00 0.00 45.77 1.98
2576 2589 2.222508 CGCCACGAACAACGAAATCTAG 60.223 50.000 0.00 0.00 45.77 2.43
2577 2590 2.735134 GCCACGAACAACGAAATCTAGT 59.265 45.455 0.00 0.00 45.77 2.57
2578 2591 3.922240 GCCACGAACAACGAAATCTAGTA 59.078 43.478 0.00 0.00 45.77 1.82
2579 2592 4.031426 GCCACGAACAACGAAATCTAGTAG 59.969 45.833 0.00 0.00 45.77 2.57
2580 2593 5.159209 CCACGAACAACGAAATCTAGTAGT 58.841 41.667 0.00 0.00 45.77 2.73
2581 2594 5.285607 CCACGAACAACGAAATCTAGTAGTC 59.714 44.000 0.00 0.00 45.77 2.59
2582 2595 5.002282 CACGAACAACGAAATCTAGTAGTCG 59.998 44.000 7.02 7.02 45.77 4.18
2590 2603 7.564044 ACGAAATCTAGTAGTCGTTGAAAAG 57.436 36.000 8.14 0.00 43.78 2.27
2591 2604 7.365741 ACGAAATCTAGTAGTCGTTGAAAAGA 58.634 34.615 8.14 0.00 43.78 2.52
2592 2605 7.325579 ACGAAATCTAGTAGTCGTTGAAAAGAC 59.674 37.037 8.14 1.44 43.78 3.01
2593 2606 7.325338 CGAAATCTAGTAGTCGTTGAAAAGACA 59.675 37.037 10.93 0.00 39.67 3.41
2594 2607 9.141400 GAAATCTAGTAGTCGTTGAAAAGACAT 57.859 33.333 10.93 0.99 39.67 3.06
2595 2608 9.490379 AAATCTAGTAGTCGTTGAAAAGACATT 57.510 29.630 10.93 0.00 39.67 2.71
2596 2609 7.869016 TCTAGTAGTCGTTGAAAAGACATTG 57.131 36.000 10.93 0.30 39.67 2.82
2597 2610 5.924475 AGTAGTCGTTGAAAAGACATTGG 57.076 39.130 10.93 0.00 39.67 3.16
2598 2611 5.365619 AGTAGTCGTTGAAAAGACATTGGT 58.634 37.500 10.93 0.00 39.67 3.67
2599 2612 5.820947 AGTAGTCGTTGAAAAGACATTGGTT 59.179 36.000 10.93 0.00 39.67 3.67
2600 2613 6.987992 AGTAGTCGTTGAAAAGACATTGGTTA 59.012 34.615 10.93 0.00 39.67 2.85
2601 2614 6.300354 AGTCGTTGAAAAGACATTGGTTAG 57.700 37.500 10.93 0.00 39.67 2.34
2602 2615 5.238650 AGTCGTTGAAAAGACATTGGTTAGG 59.761 40.000 10.93 0.00 39.67 2.69
2603 2616 4.517453 TCGTTGAAAAGACATTGGTTAGGG 59.483 41.667 0.00 0.00 0.00 3.53
2604 2617 4.556233 GTTGAAAAGACATTGGTTAGGGC 58.444 43.478 0.00 0.00 0.00 5.19
2605 2618 3.838565 TGAAAAGACATTGGTTAGGGCA 58.161 40.909 0.00 0.00 0.00 5.36
2606 2619 3.826157 TGAAAAGACATTGGTTAGGGCAG 59.174 43.478 0.00 0.00 0.00 4.85
2607 2620 1.839424 AAGACATTGGTTAGGGCAGC 58.161 50.000 0.00 0.00 0.00 5.25
2608 2621 0.698238 AGACATTGGTTAGGGCAGCA 59.302 50.000 0.00 0.00 0.00 4.41
2609 2622 0.811281 GACATTGGTTAGGGCAGCAC 59.189 55.000 0.00 0.00 0.00 4.40
2610 2623 0.611896 ACATTGGTTAGGGCAGCACC 60.612 55.000 0.00 0.00 37.93 5.01
2611 2624 0.323725 CATTGGTTAGGGCAGCACCT 60.324 55.000 7.51 7.51 44.75 4.00
2612 2625 0.034089 ATTGGTTAGGGCAGCACCTC 60.034 55.000 5.75 0.00 42.09 3.85
2613 2626 1.422977 TTGGTTAGGGCAGCACCTCA 61.423 55.000 5.75 0.00 42.09 3.86
2614 2627 1.377333 GGTTAGGGCAGCACCTCAC 60.377 63.158 5.75 5.86 42.09 3.51
2615 2628 1.741770 GTTAGGGCAGCACCTCACG 60.742 63.158 5.75 0.00 42.09 4.35
2616 2629 2.214216 TTAGGGCAGCACCTCACGT 61.214 57.895 5.75 0.00 42.09 4.49
2617 2630 0.901114 TTAGGGCAGCACCTCACGTA 60.901 55.000 5.75 0.00 42.09 3.57
2618 2631 1.320344 TAGGGCAGCACCTCACGTAG 61.320 60.000 5.75 0.00 42.09 3.51
2619 2632 2.815647 GGCAGCACCTCACGTAGC 60.816 66.667 0.00 0.00 34.51 3.58
2620 2633 3.181967 GCAGCACCTCACGTAGCG 61.182 66.667 0.00 0.00 0.00 4.26
2621 2634 3.181967 CAGCACCTCACGTAGCGC 61.182 66.667 0.00 0.00 0.00 5.92
2622 2635 3.680786 AGCACCTCACGTAGCGCA 61.681 61.111 11.47 0.00 0.00 6.09
2623 2636 3.181967 GCACCTCACGTAGCGCAG 61.182 66.667 11.47 2.53 0.00 5.18
2624 2637 2.566529 CACCTCACGTAGCGCAGA 59.433 61.111 11.47 0.00 0.00 4.26
2625 2638 1.801913 CACCTCACGTAGCGCAGAC 60.802 63.158 11.47 6.24 0.00 3.51
2626 2639 1.972223 ACCTCACGTAGCGCAGACT 60.972 57.895 11.47 0.00 0.00 3.24
2627 2640 1.213013 CCTCACGTAGCGCAGACTT 59.787 57.895 11.47 0.00 0.00 3.01
2628 2641 1.073216 CCTCACGTAGCGCAGACTTG 61.073 60.000 11.47 11.36 0.00 3.16
2640 2653 2.189594 CAGACTTGCAATCCTCCACA 57.810 50.000 0.00 0.00 0.00 4.17
2641 2654 2.507484 CAGACTTGCAATCCTCCACAA 58.493 47.619 0.00 0.00 0.00 3.33
2642 2655 2.227388 CAGACTTGCAATCCTCCACAAC 59.773 50.000 0.00 0.00 0.00 3.32
2643 2656 1.541588 GACTTGCAATCCTCCACAACC 59.458 52.381 0.00 0.00 0.00 3.77
2644 2657 1.133513 ACTTGCAATCCTCCACAACCA 60.134 47.619 0.00 0.00 0.00 3.67
2645 2658 1.962807 CTTGCAATCCTCCACAACCAA 59.037 47.619 0.00 0.00 0.00 3.67
2646 2659 2.307496 TGCAATCCTCCACAACCAAT 57.693 45.000 0.00 0.00 0.00 3.16
2647 2660 2.170166 TGCAATCCTCCACAACCAATC 58.830 47.619 0.00 0.00 0.00 2.67
2648 2661 2.225091 TGCAATCCTCCACAACCAATCT 60.225 45.455 0.00 0.00 0.00 2.40
2649 2662 3.010027 TGCAATCCTCCACAACCAATCTA 59.990 43.478 0.00 0.00 0.00 1.98
2650 2663 3.629398 GCAATCCTCCACAACCAATCTAG 59.371 47.826 0.00 0.00 0.00 2.43
2651 2664 4.626287 GCAATCCTCCACAACCAATCTAGA 60.626 45.833 0.00 0.00 0.00 2.43
2652 2665 5.121811 CAATCCTCCACAACCAATCTAGAG 58.878 45.833 0.00 0.00 0.00 2.43
2653 2666 3.107601 TCCTCCACAACCAATCTAGAGG 58.892 50.000 0.00 0.00 40.66 3.69
2654 2667 2.171448 CCTCCACAACCAATCTAGAGGG 59.829 54.545 10.84 10.84 36.58 4.30
2655 2668 2.840651 CTCCACAACCAATCTAGAGGGT 59.159 50.000 12.02 12.02 36.19 4.34
2656 2669 2.838202 TCCACAACCAATCTAGAGGGTC 59.162 50.000 16.78 0.00 32.67 4.46
2657 2670 2.418746 CCACAACCAATCTAGAGGGTCG 60.419 54.545 16.78 10.24 32.67 4.79
2658 2671 2.233922 CACAACCAATCTAGAGGGTCGT 59.766 50.000 16.78 10.81 32.67 4.34
2659 2672 3.446161 CACAACCAATCTAGAGGGTCGTA 59.554 47.826 16.78 0.00 32.67 3.43
2660 2673 3.700038 ACAACCAATCTAGAGGGTCGTAG 59.300 47.826 16.78 10.92 32.67 3.51
2661 2674 3.947612 ACCAATCTAGAGGGTCGTAGA 57.052 47.619 12.02 0.00 0.00 2.59
2662 2675 4.246712 ACCAATCTAGAGGGTCGTAGAA 57.753 45.455 12.02 0.00 39.69 2.10
2663 2676 4.607239 ACCAATCTAGAGGGTCGTAGAAA 58.393 43.478 12.02 0.00 39.69 2.52
2664 2677 4.401837 ACCAATCTAGAGGGTCGTAGAAAC 59.598 45.833 12.02 0.00 39.69 2.78
2680 2693 7.199541 CGTAGAAACGGAATCTTATCCTAGA 57.800 40.000 0.00 0.00 45.50 2.43
2681 2694 7.646314 CGTAGAAACGGAATCTTATCCTAGAA 58.354 38.462 0.00 0.00 45.50 2.10
2682 2695 7.590689 CGTAGAAACGGAATCTTATCCTAGAAC 59.409 40.741 0.00 0.00 45.50 3.01
2683 2696 7.419711 AGAAACGGAATCTTATCCTAGAACA 57.580 36.000 0.00 0.00 37.34 3.18
2684 2697 7.848128 AGAAACGGAATCTTATCCTAGAACAA 58.152 34.615 0.00 0.00 37.34 2.83
2685 2698 8.319146 AGAAACGGAATCTTATCCTAGAACAAA 58.681 33.333 0.00 0.00 37.34 2.83
2686 2699 9.110502 GAAACGGAATCTTATCCTAGAACAAAT 57.889 33.333 0.00 0.00 37.34 2.32
2687 2700 8.438676 AACGGAATCTTATCCTAGAACAAATG 57.561 34.615 0.00 0.00 37.34 2.32
2688 2701 7.565680 ACGGAATCTTATCCTAGAACAAATGT 58.434 34.615 0.00 0.00 37.34 2.71
2689 2702 7.711339 ACGGAATCTTATCCTAGAACAAATGTC 59.289 37.037 0.00 0.00 37.34 3.06
2690 2703 7.710907 CGGAATCTTATCCTAGAACAAATGTCA 59.289 37.037 0.00 0.00 37.34 3.58
2691 2704 9.396022 GGAATCTTATCCTAGAACAAATGTCAA 57.604 33.333 0.00 0.00 36.50 3.18
2694 2707 9.965902 ATCTTATCCTAGAACAAATGTCAAAGT 57.034 29.630 0.00 0.00 0.00 2.66
2695 2708 9.436957 TCTTATCCTAGAACAAATGTCAAAGTC 57.563 33.333 0.00 0.00 0.00 3.01
2696 2709 6.727824 ATCCTAGAACAAATGTCAAAGTCG 57.272 37.500 0.00 0.00 0.00 4.18
2697 2710 4.451096 TCCTAGAACAAATGTCAAAGTCGC 59.549 41.667 0.00 0.00 0.00 5.19
2698 2711 3.626028 AGAACAAATGTCAAAGTCGCC 57.374 42.857 0.00 0.00 0.00 5.54
2699 2712 2.032030 AGAACAAATGTCAAAGTCGCCG 60.032 45.455 0.00 0.00 0.00 6.46
2700 2713 1.305201 ACAAATGTCAAAGTCGCCGT 58.695 45.000 0.00 0.00 0.00 5.68
2701 2714 2.485903 ACAAATGTCAAAGTCGCCGTA 58.514 42.857 0.00 0.00 0.00 4.02
2702 2715 2.222445 ACAAATGTCAAAGTCGCCGTAC 59.778 45.455 0.00 0.00 0.00 3.67
2703 2716 1.435577 AATGTCAAAGTCGCCGTACC 58.564 50.000 0.00 0.00 0.00 3.34
2704 2717 0.319083 ATGTCAAAGTCGCCGTACCA 59.681 50.000 0.00 0.00 0.00 3.25
2705 2718 0.104487 TGTCAAAGTCGCCGTACCAA 59.896 50.000 0.00 0.00 0.00 3.67
2706 2719 1.270412 TGTCAAAGTCGCCGTACCAAT 60.270 47.619 0.00 0.00 0.00 3.16
2707 2720 2.029200 TGTCAAAGTCGCCGTACCAATA 60.029 45.455 0.00 0.00 0.00 1.90
2708 2721 2.995258 GTCAAAGTCGCCGTACCAATAA 59.005 45.455 0.00 0.00 0.00 1.40
2709 2722 2.995258 TCAAAGTCGCCGTACCAATAAC 59.005 45.455 0.00 0.00 0.00 1.89
2710 2723 2.014335 AAGTCGCCGTACCAATAACC 57.986 50.000 0.00 0.00 0.00 2.85
2711 2724 0.179129 AGTCGCCGTACCAATAACCG 60.179 55.000 0.00 0.00 0.00 4.44
2712 2725 1.141449 TCGCCGTACCAATAACCGG 59.859 57.895 0.00 0.00 43.22 5.28
2714 2727 4.129757 CCGTACCAATAACCGGCC 57.870 61.111 0.00 0.00 33.20 6.13
2715 2728 1.221293 CCGTACCAATAACCGGCCA 59.779 57.895 0.00 0.00 33.20 5.36
2716 2729 0.392729 CCGTACCAATAACCGGCCAA 60.393 55.000 0.00 0.00 33.20 4.52
2717 2730 0.728542 CGTACCAATAACCGGCCAAC 59.271 55.000 0.00 0.00 0.00 3.77
2718 2731 1.676615 CGTACCAATAACCGGCCAACT 60.677 52.381 0.00 0.00 0.00 3.16
2719 2732 1.741145 GTACCAATAACCGGCCAACTG 59.259 52.381 0.00 0.00 0.00 3.16
2720 2733 1.248101 ACCAATAACCGGCCAACTGC 61.248 55.000 0.00 0.00 40.16 4.40
2721 2734 1.247419 CCAATAACCGGCCAACTGCA 61.247 55.000 0.00 0.00 43.89 4.41
2722 2735 0.817013 CAATAACCGGCCAACTGCAT 59.183 50.000 0.00 0.00 43.89 3.96
2723 2736 0.817013 AATAACCGGCCAACTGCATG 59.183 50.000 0.00 0.00 43.89 4.06
2724 2737 1.666209 ATAACCGGCCAACTGCATGC 61.666 55.000 11.82 11.82 43.89 4.06
2727 2740 4.764336 CGGCCAACTGCATGCGTG 62.764 66.667 14.09 11.03 43.89 5.34
2737 2750 3.908189 CATGCGTGCATCCCTTGA 58.092 55.556 3.96 0.00 33.90 3.02
2738 2751 2.411535 CATGCGTGCATCCCTTGAT 58.588 52.632 3.96 0.00 33.90 2.57
2739 2752 1.596603 CATGCGTGCATCCCTTGATA 58.403 50.000 3.96 0.00 33.90 2.15
2740 2753 1.534163 CATGCGTGCATCCCTTGATAG 59.466 52.381 3.96 0.00 33.90 2.08
2741 2754 0.829990 TGCGTGCATCCCTTGATAGA 59.170 50.000 0.00 0.00 0.00 1.98
2742 2755 1.221414 GCGTGCATCCCTTGATAGAC 58.779 55.000 0.00 0.00 0.00 2.59
2743 2756 1.473257 GCGTGCATCCCTTGATAGACA 60.473 52.381 0.00 0.00 0.00 3.41
2744 2757 2.205074 CGTGCATCCCTTGATAGACAC 58.795 52.381 0.00 0.00 0.00 3.67
2745 2758 2.418609 CGTGCATCCCTTGATAGACACA 60.419 50.000 0.00 0.00 0.00 3.72
2746 2759 3.201290 GTGCATCCCTTGATAGACACAG 58.799 50.000 0.00 0.00 0.00 3.66
2747 2760 2.840038 TGCATCCCTTGATAGACACAGT 59.160 45.455 0.00 0.00 0.00 3.55
2748 2761 3.201290 GCATCCCTTGATAGACACAGTG 58.799 50.000 0.00 0.00 0.00 3.66
2749 2762 3.118629 GCATCCCTTGATAGACACAGTGA 60.119 47.826 7.81 0.00 0.00 3.41
2750 2763 4.444022 GCATCCCTTGATAGACACAGTGAT 60.444 45.833 7.81 0.00 0.00 3.06
2751 2764 4.743057 TCCCTTGATAGACACAGTGATG 57.257 45.455 7.81 0.00 0.00 3.07
2752 2765 4.096681 TCCCTTGATAGACACAGTGATGT 58.903 43.478 7.81 0.00 34.78 3.06
2753 2766 5.269189 TCCCTTGATAGACACAGTGATGTA 58.731 41.667 7.81 0.00 31.24 2.29
2754 2767 5.899547 TCCCTTGATAGACACAGTGATGTAT 59.100 40.000 7.81 0.81 31.24 2.29
2755 2768 5.987953 CCCTTGATAGACACAGTGATGTATG 59.012 44.000 7.81 0.00 31.24 2.39
2756 2769 5.987953 CCTTGATAGACACAGTGATGTATGG 59.012 44.000 7.81 0.00 31.24 2.74
2757 2770 6.407412 CCTTGATAGACACAGTGATGTATGGT 60.407 42.308 7.81 0.00 31.24 3.55
2758 2771 5.906073 TGATAGACACAGTGATGTATGGTG 58.094 41.667 7.81 0.00 31.24 4.17
2759 2772 5.656416 TGATAGACACAGTGATGTATGGTGA 59.344 40.000 7.81 0.00 31.24 4.02
2760 2773 4.890158 AGACACAGTGATGTATGGTGAA 57.110 40.909 7.81 0.00 31.24 3.18
2761 2774 5.227569 AGACACAGTGATGTATGGTGAAA 57.772 39.130 7.81 0.00 31.24 2.69
2762 2775 5.620206 AGACACAGTGATGTATGGTGAAAA 58.380 37.500 7.81 0.00 31.24 2.29
2763 2776 5.470098 AGACACAGTGATGTATGGTGAAAAC 59.530 40.000 7.81 0.00 31.24 2.43
2764 2777 4.518970 ACACAGTGATGTATGGTGAAAACC 59.481 41.667 7.81 0.00 33.82 3.27
2765 2778 4.761739 CACAGTGATGTATGGTGAAAACCT 59.238 41.667 0.00 0.00 0.00 3.50
2766 2779 5.937540 CACAGTGATGTATGGTGAAAACCTA 59.062 40.000 0.00 0.00 0.00 3.08
2767 2780 6.092670 CACAGTGATGTATGGTGAAAACCTAG 59.907 42.308 0.00 0.00 0.00 3.02
2768 2781 6.173339 CAGTGATGTATGGTGAAAACCTAGT 58.827 40.000 0.00 0.00 0.00 2.57
2769 2782 6.655003 CAGTGATGTATGGTGAAAACCTAGTT 59.345 38.462 0.00 0.00 0.00 2.24
2770 2783 6.879458 AGTGATGTATGGTGAAAACCTAGTTC 59.121 38.462 0.00 0.00 0.00 3.01
2771 2784 6.653320 GTGATGTATGGTGAAAACCTAGTTCA 59.347 38.462 0.00 0.00 32.62 3.18
2772 2785 7.336931 GTGATGTATGGTGAAAACCTAGTTCAT 59.663 37.037 0.00 0.00 37.34 2.57
2773 2786 7.336679 TGATGTATGGTGAAAACCTAGTTCATG 59.663 37.037 0.00 0.00 37.34 3.07
2774 2787 6.774673 TGTATGGTGAAAACCTAGTTCATGA 58.225 36.000 0.00 0.00 37.34 3.07
2775 2788 7.402054 TGTATGGTGAAAACCTAGTTCATGAT 58.598 34.615 0.00 0.00 37.34 2.45
2776 2789 7.552687 TGTATGGTGAAAACCTAGTTCATGATC 59.447 37.037 0.00 0.00 37.34 2.92
2777 2790 6.126863 TGGTGAAAACCTAGTTCATGATCT 57.873 37.500 11.00 11.00 37.34 2.75
2778 2791 6.542821 TGGTGAAAACCTAGTTCATGATCTT 58.457 36.000 11.45 0.00 37.34 2.40
2779 2792 7.004086 TGGTGAAAACCTAGTTCATGATCTTT 58.996 34.615 11.45 0.05 37.34 2.52
2780 2793 7.505585 TGGTGAAAACCTAGTTCATGATCTTTT 59.494 33.333 11.45 6.30 37.34 2.27
2781 2794 8.023706 GGTGAAAACCTAGTTCATGATCTTTTC 58.976 37.037 11.45 14.01 37.34 2.29
2782 2795 8.567948 GTGAAAACCTAGTTCATGATCTTTTCA 58.432 33.333 18.71 18.71 37.34 2.69
2783 2796 8.567948 TGAAAACCTAGTTCATGATCTTTTCAC 58.432 33.333 18.71 5.62 37.11 3.18
2784 2797 8.463930 AAAACCTAGTTCATGATCTTTTCACA 57.536 30.769 11.45 0.00 37.11 3.58
2785 2798 7.440523 AACCTAGTTCATGATCTTTTCACAC 57.559 36.000 11.45 0.00 37.11 3.82
2786 2799 6.773638 ACCTAGTTCATGATCTTTTCACACT 58.226 36.000 11.45 4.10 37.11 3.55
2787 2800 7.227156 ACCTAGTTCATGATCTTTTCACACTT 58.773 34.615 11.45 0.00 37.11 3.16
2788 2801 7.721399 ACCTAGTTCATGATCTTTTCACACTTT 59.279 33.333 11.45 0.00 37.11 2.66
2789 2802 8.019669 CCTAGTTCATGATCTTTTCACACTTTG 58.980 37.037 11.45 0.00 37.11 2.77
2790 2803 7.572523 AGTTCATGATCTTTTCACACTTTGA 57.427 32.000 0.00 0.00 37.11 2.69
2791 2804 7.646314 AGTTCATGATCTTTTCACACTTTGAG 58.354 34.615 0.00 0.00 37.11 3.02
2792 2805 6.564709 TCATGATCTTTTCACACTTTGAGG 57.435 37.500 0.00 0.00 37.11 3.86
2793 2806 5.474532 TCATGATCTTTTCACACTTTGAGGG 59.525 40.000 0.00 0.00 37.11 4.30
2794 2807 5.047566 TGATCTTTTCACACTTTGAGGGA 57.952 39.130 0.00 0.00 34.94 4.20
2795 2808 5.445069 TGATCTTTTCACACTTTGAGGGAA 58.555 37.500 0.00 0.00 34.94 3.97
2796 2809 5.890985 TGATCTTTTCACACTTTGAGGGAAA 59.109 36.000 0.00 0.00 34.94 3.13
2797 2810 6.379703 TGATCTTTTCACACTTTGAGGGAAAA 59.620 34.615 3.67 3.67 34.94 2.29
2798 2811 6.597832 TCTTTTCACACTTTGAGGGAAAAA 57.402 33.333 5.07 0.00 37.11 1.94
2819 2832 6.906157 AAAATGGAGCAAATCAAGAGAAGA 57.094 33.333 0.00 0.00 0.00 2.87
2820 2833 6.906157 AAATGGAGCAAATCAAGAGAAGAA 57.094 33.333 0.00 0.00 0.00 2.52
2821 2834 5.893897 ATGGAGCAAATCAAGAGAAGAAC 57.106 39.130 0.00 0.00 0.00 3.01
2822 2835 4.717877 TGGAGCAAATCAAGAGAAGAACA 58.282 39.130 0.00 0.00 0.00 3.18
2823 2836 4.516698 TGGAGCAAATCAAGAGAAGAACAC 59.483 41.667 0.00 0.00 0.00 3.32
2824 2837 4.516698 GGAGCAAATCAAGAGAAGAACACA 59.483 41.667 0.00 0.00 0.00 3.72
2825 2838 5.009010 GGAGCAAATCAAGAGAAGAACACAA 59.991 40.000 0.00 0.00 0.00 3.33
2826 2839 6.455360 AGCAAATCAAGAGAAGAACACAAA 57.545 33.333 0.00 0.00 0.00 2.83
2827 2840 6.866480 AGCAAATCAAGAGAAGAACACAAAA 58.134 32.000 0.00 0.00 0.00 2.44
2828 2841 7.495055 AGCAAATCAAGAGAAGAACACAAAAT 58.505 30.769 0.00 0.00 0.00 1.82
2829 2842 7.437267 AGCAAATCAAGAGAAGAACACAAAATG 59.563 33.333 0.00 0.00 0.00 2.32
2830 2843 7.436080 GCAAATCAAGAGAAGAACACAAAATGA 59.564 33.333 0.00 0.00 0.00 2.57
2831 2844 9.304731 CAAATCAAGAGAAGAACACAAAATGAA 57.695 29.630 0.00 0.00 0.00 2.57
2832 2845 8.862550 AATCAAGAGAAGAACACAAAATGAAC 57.137 30.769 0.00 0.00 0.00 3.18
2833 2846 7.389803 TCAAGAGAAGAACACAAAATGAACA 57.610 32.000 0.00 0.00 0.00 3.18
2834 2847 7.250569 TCAAGAGAAGAACACAAAATGAACAC 58.749 34.615 0.00 0.00 0.00 3.32
2835 2848 7.121168 TCAAGAGAAGAACACAAAATGAACACT 59.879 33.333 0.00 0.00 0.00 3.55
2836 2849 7.020914 AGAGAAGAACACAAAATGAACACTC 57.979 36.000 0.00 0.00 0.00 3.51
2837 2850 6.599244 AGAGAAGAACACAAAATGAACACTCA 59.401 34.615 0.00 0.00 35.56 3.41
2838 2851 7.121168 AGAGAAGAACACAAAATGAACACTCAA 59.879 33.333 0.00 0.00 34.49 3.02
2839 2852 7.601856 AGAAGAACACAAAATGAACACTCAAA 58.398 30.769 0.00 0.00 34.49 2.69
2840 2853 8.253113 AGAAGAACACAAAATGAACACTCAAAT 58.747 29.630 0.00 0.00 34.49 2.32
2841 2854 7.760131 AGAACACAAAATGAACACTCAAATG 57.240 32.000 0.00 0.00 34.49 2.32
2842 2855 7.546358 AGAACACAAAATGAACACTCAAATGA 58.454 30.769 0.00 0.00 34.49 2.57
2843 2856 7.489113 AGAACACAAAATGAACACTCAAATGAC 59.511 33.333 0.00 0.00 34.49 3.06
2844 2857 6.629128 ACACAAAATGAACACTCAAATGACA 58.371 32.000 0.00 0.00 34.49 3.58
2845 2858 6.753279 ACACAAAATGAACACTCAAATGACAG 59.247 34.615 0.00 0.00 34.49 3.51
2846 2859 6.974048 CACAAAATGAACACTCAAATGACAGA 59.026 34.615 0.00 0.00 34.49 3.41
2847 2860 7.166970 CACAAAATGAACACTCAAATGACAGAG 59.833 37.037 0.00 0.00 34.49 3.35
2848 2861 7.067372 ACAAAATGAACACTCAAATGACAGAGA 59.933 33.333 0.00 0.00 34.49 3.10
2849 2862 7.756395 AAATGAACACTCAAATGACAGAGAT 57.244 32.000 0.00 0.00 34.49 2.75
2850 2863 7.756395 AATGAACACTCAAATGACAGAGATT 57.244 32.000 0.00 0.00 34.49 2.40
2851 2864 6.791887 TGAACACTCAAATGACAGAGATTC 57.208 37.500 0.00 0.00 35.83 2.52
2852 2865 6.290605 TGAACACTCAAATGACAGAGATTCA 58.709 36.000 0.00 0.00 37.75 2.57
2853 2866 6.767423 TGAACACTCAAATGACAGAGATTCAA 59.233 34.615 0.00 0.00 37.46 2.69
2854 2867 7.446319 TGAACACTCAAATGACAGAGATTCAAT 59.554 33.333 0.00 0.00 37.46 2.57
2855 2868 7.375106 ACACTCAAATGACAGAGATTCAATC 57.625 36.000 0.00 0.00 35.83 2.67
2856 2869 6.938596 ACACTCAAATGACAGAGATTCAATCA 59.061 34.615 0.00 0.00 35.83 2.57
2857 2870 7.094890 ACACTCAAATGACAGAGATTCAATCAC 60.095 37.037 0.00 0.00 35.83 3.06
2858 2871 6.938596 ACTCAAATGACAGAGATTCAATCACA 59.061 34.615 0.00 0.00 35.83 3.58
2859 2872 7.094890 ACTCAAATGACAGAGATTCAATCACAC 60.095 37.037 0.00 0.00 35.83 3.82
2860 2873 6.711645 TCAAATGACAGAGATTCAATCACACA 59.288 34.615 0.00 0.00 0.00 3.72
2861 2874 7.392393 TCAAATGACAGAGATTCAATCACACAT 59.608 33.333 0.00 0.00 0.00 3.21
2862 2875 8.671028 CAAATGACAGAGATTCAATCACACATA 58.329 33.333 0.00 0.00 0.00 2.29
2863 2876 8.975663 AATGACAGAGATTCAATCACACATAT 57.024 30.769 0.00 0.00 0.00 1.78
2864 2877 7.781548 TGACAGAGATTCAATCACACATATG 57.218 36.000 0.00 0.00 0.00 1.78
2865 2878 7.333323 TGACAGAGATTCAATCACACATATGT 58.667 34.615 1.41 1.41 40.80 2.29
2866 2879 7.825761 TGACAGAGATTCAATCACACATATGTT 59.174 33.333 5.37 0.00 36.72 2.71
2867 2880 9.317936 GACAGAGATTCAATCACACATATGTTA 57.682 33.333 5.37 0.00 36.72 2.41
2868 2881 9.671279 ACAGAGATTCAATCACACATATGTTAA 57.329 29.630 5.37 0.00 36.72 2.01
2875 2888 8.572855 TCAATCACACATATGTTAAATCCACA 57.427 30.769 5.37 0.00 36.72 4.17
2876 2889 9.187996 TCAATCACACATATGTTAAATCCACAT 57.812 29.630 5.37 0.00 36.72 3.21
2879 2892 9.625747 ATCACACATATGTTAAATCCACATACA 57.374 29.630 5.37 0.00 39.40 2.29
2880 2893 8.888716 TCACACATATGTTAAATCCACATACAC 58.111 33.333 5.37 0.00 39.40 2.90
2881 2894 8.672815 CACACATATGTTAAATCCACATACACA 58.327 33.333 5.37 0.00 39.40 3.72
2882 2895 9.407380 ACACATATGTTAAATCCACATACACAT 57.593 29.630 5.37 0.00 39.40 3.21
2887 2900 8.908786 ATGTTAAATCCACATACACATAGAGG 57.091 34.615 0.00 0.00 32.88 3.69
2888 2901 7.279615 TGTTAAATCCACATACACATAGAGGG 58.720 38.462 0.00 0.00 0.00 4.30
2889 2902 7.126573 TGTTAAATCCACATACACATAGAGGGA 59.873 37.037 0.00 0.00 0.00 4.20
2890 2903 6.770286 AAATCCACATACACATAGAGGGAT 57.230 37.500 0.00 0.00 35.51 3.85
2891 2904 7.872061 AAATCCACATACACATAGAGGGATA 57.128 36.000 0.00 0.00 33.73 2.59
2892 2905 6.859112 ATCCACATACACATAGAGGGATAC 57.141 41.667 0.00 0.00 32.40 2.24
2893 2906 5.711698 TCCACATACACATAGAGGGATACA 58.288 41.667 0.00 0.00 39.74 2.29
2894 2907 6.140377 TCCACATACACATAGAGGGATACAA 58.860 40.000 0.00 0.00 39.74 2.41
2895 2908 6.267699 TCCACATACACATAGAGGGATACAAG 59.732 42.308 0.00 0.00 39.74 3.16
2896 2909 6.459066 CACATACACATAGAGGGATACAAGG 58.541 44.000 0.00 0.00 39.74 3.61
2897 2910 5.544176 ACATACACATAGAGGGATACAAGGG 59.456 44.000 0.00 0.00 39.74 3.95
2898 2911 4.008916 ACACATAGAGGGATACAAGGGT 57.991 45.455 0.00 0.00 39.74 4.34
2899 2912 3.967987 ACACATAGAGGGATACAAGGGTC 59.032 47.826 0.00 0.00 39.74 4.46
2900 2913 3.325135 CACATAGAGGGATACAAGGGTCC 59.675 52.174 0.00 0.00 39.74 4.46
2901 2914 3.051341 ACATAGAGGGATACAAGGGTCCA 60.051 47.826 0.00 0.00 36.19 4.02
2902 2915 2.661176 AGAGGGATACAAGGGTCCAA 57.339 50.000 0.00 0.00 36.19 3.53
2903 2916 2.482494 AGAGGGATACAAGGGTCCAAG 58.518 52.381 0.00 0.00 36.19 3.61
2904 2917 2.197465 GAGGGATACAAGGGTCCAAGT 58.803 52.381 0.00 0.00 36.19 3.16
2905 2918 2.170817 GAGGGATACAAGGGTCCAAGTC 59.829 54.545 0.00 0.00 36.19 3.01
2906 2919 1.212195 GGGATACAAGGGTCCAAGTCC 59.788 57.143 0.00 0.00 36.19 3.85
2907 2920 1.913419 GGATACAAGGGTCCAAGTCCA 59.087 52.381 0.00 0.00 34.57 4.02
2908 2921 2.307686 GGATACAAGGGTCCAAGTCCAA 59.692 50.000 0.00 0.00 34.57 3.53
2909 2922 2.943036 TACAAGGGTCCAAGTCCAAC 57.057 50.000 0.00 0.00 0.00 3.77
2910 2923 0.923358 ACAAGGGTCCAAGTCCAACA 59.077 50.000 0.00 0.00 0.00 3.33
2911 2924 1.318576 CAAGGGTCCAAGTCCAACAC 58.681 55.000 0.00 0.00 0.00 3.32
2912 2925 0.923358 AAGGGTCCAAGTCCAACACA 59.077 50.000 0.00 0.00 0.00 3.72
2913 2926 0.923358 AGGGTCCAAGTCCAACACAA 59.077 50.000 0.00 0.00 0.00 3.33
2914 2927 1.133792 AGGGTCCAAGTCCAACACAAG 60.134 52.381 0.00 0.00 0.00 3.16
2915 2928 1.133915 GGGTCCAAGTCCAACACAAGA 60.134 52.381 0.00 0.00 0.00 3.02
2916 2929 2.222027 GGTCCAAGTCCAACACAAGAG 58.778 52.381 0.00 0.00 0.00 2.85
2917 2930 2.222027 GTCCAAGTCCAACACAAGAGG 58.778 52.381 0.00 0.00 0.00 3.69
2918 2931 1.142870 TCCAAGTCCAACACAAGAGGG 59.857 52.381 0.00 0.00 0.00 4.30
2919 2932 0.954452 CAAGTCCAACACAAGAGGGC 59.046 55.000 0.00 0.00 0.00 5.19
2920 2933 0.550914 AAGTCCAACACAAGAGGGCA 59.449 50.000 0.00 0.00 0.00 5.36
2921 2934 0.550914 AGTCCAACACAAGAGGGCAA 59.449 50.000 0.00 0.00 0.00 4.52
2922 2935 1.064017 AGTCCAACACAAGAGGGCAAA 60.064 47.619 0.00 0.00 0.00 3.68
2923 2936 1.067060 GTCCAACACAAGAGGGCAAAC 59.933 52.381 0.00 0.00 0.00 2.93
2924 2937 0.030638 CCAACACAAGAGGGCAAACG 59.969 55.000 0.00 0.00 0.00 3.60
2925 2938 1.021202 CAACACAAGAGGGCAAACGA 58.979 50.000 0.00 0.00 0.00 3.85
2926 2939 1.002468 CAACACAAGAGGGCAAACGAG 60.002 52.381 0.00 0.00 0.00 4.18
2927 2940 0.535102 ACACAAGAGGGCAAACGAGG 60.535 55.000 0.00 0.00 0.00 4.63
2928 2941 0.250295 CACAAGAGGGCAAACGAGGA 60.250 55.000 0.00 0.00 0.00 3.71
2929 2942 0.472471 ACAAGAGGGCAAACGAGGAA 59.528 50.000 0.00 0.00 0.00 3.36
2930 2943 0.875059 CAAGAGGGCAAACGAGGAAC 59.125 55.000 0.00 0.00 0.00 3.62
2932 2945 1.640917 AGAGGGCAAACGAGGAACTA 58.359 50.000 0.00 0.00 41.55 2.24
2933 2946 1.550976 AGAGGGCAAACGAGGAACTAG 59.449 52.381 0.00 0.00 41.55 2.57
2942 2955 2.816411 ACGAGGAACTAGTTCATCCCA 58.184 47.619 33.08 0.00 42.98 4.37
2943 2956 3.170717 ACGAGGAACTAGTTCATCCCAA 58.829 45.455 33.08 0.00 42.98 4.12
2944 2957 3.775316 ACGAGGAACTAGTTCATCCCAAT 59.225 43.478 33.08 19.38 42.98 3.16
2945 2958 4.141914 ACGAGGAACTAGTTCATCCCAATC 60.142 45.833 33.08 16.29 42.98 2.67
2946 2959 4.709250 GAGGAACTAGTTCATCCCAATCC 58.291 47.826 30.82 15.68 42.56 3.01
2947 2960 4.375313 AGGAACTAGTTCATCCCAATCCT 58.625 43.478 31.30 17.34 41.20 3.24
2948 2961 4.790790 AGGAACTAGTTCATCCCAATCCTT 59.209 41.667 31.30 0.73 41.20 3.36
2949 2962 4.884164 GGAACTAGTTCATCCCAATCCTTG 59.116 45.833 31.30 0.00 41.20 3.61
2950 2963 5.339200 GGAACTAGTTCATCCCAATCCTTGA 60.339 44.000 31.30 0.00 41.20 3.02
2951 2964 5.779241 ACTAGTTCATCCCAATCCTTGAA 57.221 39.130 0.00 0.00 0.00 2.69
2952 2965 5.749462 ACTAGTTCATCCCAATCCTTGAAG 58.251 41.667 0.00 0.00 0.00 3.02
2953 2966 3.973425 AGTTCATCCCAATCCTTGAAGG 58.027 45.455 4.45 4.45 36.46 3.46
2964 2977 2.977808 TCCTTGAAGGAGTTGAGGTCT 58.022 47.619 10.46 0.00 40.06 3.85
2965 2978 3.318313 TCCTTGAAGGAGTTGAGGTCTT 58.682 45.455 10.46 0.00 40.06 3.01
2966 2979 3.716872 TCCTTGAAGGAGTTGAGGTCTTT 59.283 43.478 10.46 0.00 40.06 2.52
2967 2980 3.817647 CCTTGAAGGAGTTGAGGTCTTTG 59.182 47.826 4.95 0.00 37.67 2.77
2968 2981 4.455606 CTTGAAGGAGTTGAGGTCTTTGT 58.544 43.478 0.00 0.00 0.00 2.83
2969 2982 5.454755 CCTTGAAGGAGTTGAGGTCTTTGTA 60.455 44.000 4.95 0.00 37.67 2.41
2970 2983 5.825593 TGAAGGAGTTGAGGTCTTTGTAT 57.174 39.130 0.00 0.00 0.00 2.29
2971 2984 5.794894 TGAAGGAGTTGAGGTCTTTGTATC 58.205 41.667 0.00 0.00 0.00 2.24
2972 2985 4.828072 AGGAGTTGAGGTCTTTGTATCC 57.172 45.455 0.00 0.00 0.00 2.59
2973 2986 4.168101 AGGAGTTGAGGTCTTTGTATCCA 58.832 43.478 0.00 0.00 0.00 3.41
2974 2987 4.597507 AGGAGTTGAGGTCTTTGTATCCAA 59.402 41.667 0.00 0.00 0.00 3.53
2975 2988 4.938226 GGAGTTGAGGTCTTTGTATCCAAG 59.062 45.833 0.00 0.00 0.00 3.61
2976 2989 5.280011 GGAGTTGAGGTCTTTGTATCCAAGA 60.280 44.000 0.00 0.00 0.00 3.02
2977 2990 5.799213 AGTTGAGGTCTTTGTATCCAAGAG 58.201 41.667 0.00 0.00 0.00 2.85
2978 2991 4.826274 TGAGGTCTTTGTATCCAAGAGG 57.174 45.455 0.00 0.00 0.00 3.69
3004 3017 3.965888 CTGGAAGGAAGGGGTCTTG 57.034 57.895 0.00 0.00 32.52 3.02
3005 3018 1.362224 CTGGAAGGAAGGGGTCTTGA 58.638 55.000 0.00 0.00 32.52 3.02
3006 3019 1.705186 CTGGAAGGAAGGGGTCTTGAA 59.295 52.381 0.00 0.00 32.52 2.69
3007 3020 2.310052 CTGGAAGGAAGGGGTCTTGAAT 59.690 50.000 0.00 0.00 32.52 2.57
3008 3021 2.308866 TGGAAGGAAGGGGTCTTGAATC 59.691 50.000 0.00 0.00 32.52 2.52
3009 3022 2.357257 GGAAGGAAGGGGTCTTGAATCC 60.357 54.545 0.00 0.00 32.52 3.01
3010 3023 2.059756 AGGAAGGGGTCTTGAATCCA 57.940 50.000 0.00 0.00 32.52 3.41
3011 3024 2.577970 AGGAAGGGGTCTTGAATCCAT 58.422 47.619 0.00 0.00 32.52 3.41
3012 3025 2.929043 AGGAAGGGGTCTTGAATCCATT 59.071 45.455 0.00 0.00 32.52 3.16
3013 3026 3.337909 AGGAAGGGGTCTTGAATCCATTT 59.662 43.478 0.00 0.00 32.52 2.32
3014 3027 3.448660 GGAAGGGGTCTTGAATCCATTTG 59.551 47.826 0.00 0.00 32.52 2.32
3015 3028 3.105959 AGGGGTCTTGAATCCATTTGG 57.894 47.619 0.00 0.00 0.00 3.28
3016 3029 4.814173 GAAGGGGTCTTGAATCCATTTGGA 60.814 45.833 0.94 0.94 40.07 3.53
3017 3030 6.616381 GAAGGGGTCTTGAATCCATTTGGAG 61.616 48.000 5.40 0.00 39.51 3.86
3018 3031 8.727890 GAAGGGGTCTTGAATCCATTTGGAGA 62.728 46.154 5.40 0.00 39.51 3.71
3019 3032 9.931818 GAAGGGGTCTTGAATCCATTTGGAGAT 62.932 44.444 5.40 0.00 39.51 2.75
3037 3050 2.699846 AGATCTTCTCTCACATGGAGGC 59.300 50.000 10.23 0.00 44.19 4.70
3038 3051 1.198713 TCTTCTCTCACATGGAGGCC 58.801 55.000 0.00 0.00 44.19 5.19
3039 3052 1.202330 CTTCTCTCACATGGAGGCCT 58.798 55.000 3.86 3.86 44.19 5.19
3040 3053 1.558756 CTTCTCTCACATGGAGGCCTT 59.441 52.381 6.77 0.00 44.19 4.35
3041 3054 0.907486 TCTCTCACATGGAGGCCTTG 59.093 55.000 6.77 3.45 44.19 3.61
3042 3055 0.907486 CTCTCACATGGAGGCCTTGA 59.093 55.000 6.77 5.11 44.19 3.02
3043 3056 1.489649 CTCTCACATGGAGGCCTTGAT 59.510 52.381 6.77 0.00 44.19 2.57
3044 3057 1.487976 TCTCACATGGAGGCCTTGATC 59.512 52.381 6.77 0.00 44.19 2.92
3045 3058 1.489649 CTCACATGGAGGCCTTGATCT 59.510 52.381 6.77 0.00 40.13 2.75
3046 3059 1.487976 TCACATGGAGGCCTTGATCTC 59.512 52.381 6.77 0.00 33.58 2.75
3051 3064 1.978454 GGAGGCCTTGATCTCCATTG 58.022 55.000 6.77 0.00 46.54 2.82
3052 3065 1.478288 GGAGGCCTTGATCTCCATTGG 60.478 57.143 6.77 0.00 46.54 3.16
3053 3066 1.492176 GAGGCCTTGATCTCCATTGGA 59.508 52.381 6.77 5.05 0.00 3.53
3064 3077 1.879575 TCCATTGGAGAGGTAGGTGG 58.120 55.000 0.00 0.00 0.00 4.61
3065 3078 0.839946 CCATTGGAGAGGTAGGTGGG 59.160 60.000 0.00 0.00 0.00 4.61
3066 3079 0.181350 CATTGGAGAGGTAGGTGGGC 59.819 60.000 0.00 0.00 0.00 5.36
3067 3080 1.338136 ATTGGAGAGGTAGGTGGGCG 61.338 60.000 0.00 0.00 0.00 6.13
3068 3081 2.043248 GGAGAGGTAGGTGGGCGA 60.043 66.667 0.00 0.00 0.00 5.54
3069 3082 2.128507 GGAGAGGTAGGTGGGCGAG 61.129 68.421 0.00 0.00 0.00 5.03
3070 3083 2.760385 AGAGGTAGGTGGGCGAGC 60.760 66.667 0.00 0.00 0.00 5.03
3071 3084 3.075005 GAGGTAGGTGGGCGAGCA 61.075 66.667 0.66 0.00 0.00 4.26
3072 3085 2.606519 AGGTAGGTGGGCGAGCAA 60.607 61.111 0.66 0.00 0.00 3.91
3073 3086 2.180159 GAGGTAGGTGGGCGAGCAAA 62.180 60.000 0.66 0.00 0.00 3.68
3074 3087 1.302993 GGTAGGTGGGCGAGCAAAA 60.303 57.895 0.66 0.00 0.00 2.44
3075 3088 1.583495 GGTAGGTGGGCGAGCAAAAC 61.583 60.000 0.66 0.00 0.00 2.43
3076 3089 0.605589 GTAGGTGGGCGAGCAAAACT 60.606 55.000 0.66 0.00 0.00 2.66
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
409 411 0.747852 TGTACACACTGAAGTCGCCA 59.252 50.000 0.00 0.00 0.00 5.69
456 458 8.840200 AAGTACTAATCCTCCTAATCAGTCAA 57.160 34.615 0.00 0.00 0.00 3.18
757 759 6.534079 CCTGCTTCCATTTCTCAATTCATTTC 59.466 38.462 0.00 0.00 0.00 2.17
758 760 6.403878 CCTGCTTCCATTTCTCAATTCATTT 58.596 36.000 0.00 0.00 0.00 2.32
759 761 5.626116 GCCTGCTTCCATTTCTCAATTCATT 60.626 40.000 0.00 0.00 0.00 2.57
1407 1415 2.060383 CCTGAGGTCCTCCATGCGA 61.060 63.158 16.60 0.00 35.89 5.10
2202 2215 7.032580 CGAACTGAATCTTAGAACAGACATCT 58.967 38.462 20.18 2.15 34.88 2.90
2357 2370 8.322906 TGATTTGTTGAATGACTACTAAGTGG 57.677 34.615 0.00 0.00 35.56 4.00
2397 2410 3.011708 AGTTATGAGATGCCCTTTGGGTT 59.988 43.478 4.42 0.00 46.51 4.11
2531 2544 1.946081 GGCTACACTACCTACGGACTC 59.054 57.143 0.00 0.00 0.00 3.36
2558 2571 5.002282 CGACTACTAGATTTCGTTGTTCGTG 59.998 44.000 0.00 0.00 40.80 4.35
2559 2572 5.084722 CGACTACTAGATTTCGTTGTTCGT 58.915 41.667 0.00 0.00 40.80 3.85
2560 2573 5.084722 ACGACTACTAGATTTCGTTGTTCG 58.915 41.667 0.00 0.00 41.80 3.95
2566 2579 7.325579 GTCTTTTCAACGACTACTAGATTTCGT 59.674 37.037 0.00 4.08 46.26 3.85
2567 2580 7.325338 TGTCTTTTCAACGACTACTAGATTTCG 59.675 37.037 0.00 3.40 37.50 3.46
2568 2581 8.516811 TGTCTTTTCAACGACTACTAGATTTC 57.483 34.615 0.00 0.00 0.00 2.17
2569 2582 9.490379 AATGTCTTTTCAACGACTACTAGATTT 57.510 29.630 0.00 0.00 0.00 2.17
2570 2583 8.926710 CAATGTCTTTTCAACGACTACTAGATT 58.073 33.333 0.00 0.00 0.00 2.40
2571 2584 7.545965 CCAATGTCTTTTCAACGACTACTAGAT 59.454 37.037 0.00 0.00 0.00 1.98
2572 2585 6.866770 CCAATGTCTTTTCAACGACTACTAGA 59.133 38.462 0.00 0.00 0.00 2.43
2573 2586 6.645415 ACCAATGTCTTTTCAACGACTACTAG 59.355 38.462 0.00 0.00 0.00 2.57
2574 2587 6.518493 ACCAATGTCTTTTCAACGACTACTA 58.482 36.000 0.00 0.00 0.00 1.82
2575 2588 5.365619 ACCAATGTCTTTTCAACGACTACT 58.634 37.500 0.00 0.00 0.00 2.57
2576 2589 5.668558 ACCAATGTCTTTTCAACGACTAC 57.331 39.130 0.00 0.00 0.00 2.73
2577 2590 6.425721 CCTAACCAATGTCTTTTCAACGACTA 59.574 38.462 0.00 0.00 0.00 2.59
2578 2591 5.238650 CCTAACCAATGTCTTTTCAACGACT 59.761 40.000 0.00 0.00 0.00 4.18
2579 2592 5.449304 CCTAACCAATGTCTTTTCAACGAC 58.551 41.667 0.00 0.00 0.00 4.34
2580 2593 4.517453 CCCTAACCAATGTCTTTTCAACGA 59.483 41.667 0.00 0.00 0.00 3.85
2581 2594 4.794169 CCCTAACCAATGTCTTTTCAACG 58.206 43.478 0.00 0.00 0.00 4.10
2582 2595 4.038642 TGCCCTAACCAATGTCTTTTCAAC 59.961 41.667 0.00 0.00 0.00 3.18
2583 2596 4.219115 TGCCCTAACCAATGTCTTTTCAA 58.781 39.130 0.00 0.00 0.00 2.69
2584 2597 3.826157 CTGCCCTAACCAATGTCTTTTCA 59.174 43.478 0.00 0.00 0.00 2.69
2585 2598 3.367395 GCTGCCCTAACCAATGTCTTTTC 60.367 47.826 0.00 0.00 0.00 2.29
2586 2599 2.562738 GCTGCCCTAACCAATGTCTTTT 59.437 45.455 0.00 0.00 0.00 2.27
2587 2600 2.171003 GCTGCCCTAACCAATGTCTTT 58.829 47.619 0.00 0.00 0.00 2.52
2588 2601 1.075374 TGCTGCCCTAACCAATGTCTT 59.925 47.619 0.00 0.00 0.00 3.01
2589 2602 0.698238 TGCTGCCCTAACCAATGTCT 59.302 50.000 0.00 0.00 0.00 3.41
2590 2603 0.811281 GTGCTGCCCTAACCAATGTC 59.189 55.000 0.00 0.00 0.00 3.06
2591 2604 0.611896 GGTGCTGCCCTAACCAATGT 60.612 55.000 0.00 0.00 33.94 2.71
2592 2605 0.323725 AGGTGCTGCCCTAACCAATG 60.324 55.000 9.24 0.00 38.26 2.82
2593 2606 0.034089 GAGGTGCTGCCCTAACCAAT 60.034 55.000 9.26 0.00 38.26 3.16
2594 2607 1.378762 GAGGTGCTGCCCTAACCAA 59.621 57.895 9.26 0.00 38.26 3.67
2595 2608 1.845664 TGAGGTGCTGCCCTAACCA 60.846 57.895 9.26 2.34 38.26 3.67
2596 2609 1.377333 GTGAGGTGCTGCCCTAACC 60.377 63.158 11.59 6.17 38.26 2.85
2597 2610 1.741770 CGTGAGGTGCTGCCCTAAC 60.742 63.158 12.31 12.31 38.26 2.34
2598 2611 0.901114 TACGTGAGGTGCTGCCCTAA 60.901 55.000 9.26 0.49 38.26 2.69
2599 2612 1.304630 TACGTGAGGTGCTGCCCTA 60.305 57.895 9.26 0.00 38.26 3.53
2600 2613 2.603473 TACGTGAGGTGCTGCCCT 60.603 61.111 9.08 9.08 38.26 5.19
2601 2614 2.125512 CTACGTGAGGTGCTGCCC 60.126 66.667 0.00 0.00 38.26 5.36
2602 2615 2.815647 GCTACGTGAGGTGCTGCC 60.816 66.667 0.00 0.00 37.58 4.85
2603 2616 3.181967 CGCTACGTGAGGTGCTGC 61.182 66.667 0.00 0.00 0.00 5.25
2604 2617 3.181967 GCGCTACGTGAGGTGCTG 61.182 66.667 0.00 0.00 36.23 4.41
2605 2618 3.633094 CTGCGCTACGTGAGGTGCT 62.633 63.158 9.73 0.00 39.38 4.40
2606 2619 3.181967 CTGCGCTACGTGAGGTGC 61.182 66.667 9.73 13.76 39.13 5.01
2607 2620 1.801913 GTCTGCGCTACGTGAGGTG 60.802 63.158 9.73 0.00 0.00 4.00
2608 2621 1.524863 AAGTCTGCGCTACGTGAGGT 61.525 55.000 9.73 0.00 0.00 3.85
2609 2622 1.073216 CAAGTCTGCGCTACGTGAGG 61.073 60.000 18.98 0.00 0.00 3.86
2610 2623 1.678269 GCAAGTCTGCGCTACGTGAG 61.678 60.000 24.74 8.42 39.20 3.51
2611 2624 1.733041 GCAAGTCTGCGCTACGTGA 60.733 57.895 24.74 8.12 39.20 4.35
2612 2625 2.772189 GCAAGTCTGCGCTACGTG 59.228 61.111 19.27 19.27 39.20 4.49
2621 2634 2.189594 TGTGGAGGATTGCAAGTCTG 57.810 50.000 4.94 0.00 0.00 3.51
2622 2635 2.508526 GTTGTGGAGGATTGCAAGTCT 58.491 47.619 4.94 4.55 0.00 3.24
2623 2636 1.541588 GGTTGTGGAGGATTGCAAGTC 59.458 52.381 4.94 1.34 0.00 3.01
2624 2637 1.133513 TGGTTGTGGAGGATTGCAAGT 60.134 47.619 4.94 0.00 0.00 3.16
2625 2638 1.619654 TGGTTGTGGAGGATTGCAAG 58.380 50.000 4.94 0.00 0.00 4.01
2626 2639 2.079170 TTGGTTGTGGAGGATTGCAA 57.921 45.000 0.00 0.00 0.00 4.08
2627 2640 2.170166 GATTGGTTGTGGAGGATTGCA 58.830 47.619 0.00 0.00 0.00 4.08
2628 2641 2.450476 AGATTGGTTGTGGAGGATTGC 58.550 47.619 0.00 0.00 0.00 3.56
2629 2642 5.102953 TCTAGATTGGTTGTGGAGGATTG 57.897 43.478 0.00 0.00 0.00 2.67
2630 2643 4.164988 CCTCTAGATTGGTTGTGGAGGATT 59.835 45.833 0.00 0.00 40.68 3.01
2631 2644 3.713764 CCTCTAGATTGGTTGTGGAGGAT 59.286 47.826 0.00 0.00 40.68 3.24
2632 2645 3.107601 CCTCTAGATTGGTTGTGGAGGA 58.892 50.000 0.00 0.00 40.68 3.71
2633 2646 2.171448 CCCTCTAGATTGGTTGTGGAGG 59.829 54.545 0.00 0.00 38.71 4.30
2634 2647 2.840651 ACCCTCTAGATTGGTTGTGGAG 59.159 50.000 8.02 0.00 0.00 3.86
2635 2648 2.838202 GACCCTCTAGATTGGTTGTGGA 59.162 50.000 13.68 0.00 30.97 4.02
2636 2649 2.418746 CGACCCTCTAGATTGGTTGTGG 60.419 54.545 13.68 0.26 30.97 4.17
2637 2650 2.233922 ACGACCCTCTAGATTGGTTGTG 59.766 50.000 23.99 15.40 43.57 3.33
2638 2651 2.537143 ACGACCCTCTAGATTGGTTGT 58.463 47.619 21.05 21.05 41.06 3.32
2639 2652 3.952323 TCTACGACCCTCTAGATTGGTTG 59.048 47.826 20.08 20.08 39.13 3.77
2640 2653 4.246712 TCTACGACCCTCTAGATTGGTT 57.753 45.455 13.68 4.03 30.97 3.67
2641 2654 3.947612 TCTACGACCCTCTAGATTGGT 57.052 47.619 12.63 12.63 34.33 3.67
2642 2655 4.934515 GTTTCTACGACCCTCTAGATTGG 58.065 47.826 6.86 6.86 0.00 3.16
2657 2670 8.411683 TGTTCTAGGATAAGATTCCGTTTCTAC 58.588 37.037 0.00 0.00 40.94 2.59
2658 2671 8.529424 TGTTCTAGGATAAGATTCCGTTTCTA 57.471 34.615 0.00 0.00 40.94 2.10
2659 2672 7.419711 TGTTCTAGGATAAGATTCCGTTTCT 57.580 36.000 0.00 0.00 40.94 2.52
2660 2673 8.488651 TTTGTTCTAGGATAAGATTCCGTTTC 57.511 34.615 0.00 0.00 40.94 2.78
2661 2674 8.893727 CATTTGTTCTAGGATAAGATTCCGTTT 58.106 33.333 0.00 0.00 40.94 3.60
2662 2675 8.047310 ACATTTGTTCTAGGATAAGATTCCGTT 58.953 33.333 0.00 0.00 40.94 4.44
2663 2676 7.565680 ACATTTGTTCTAGGATAAGATTCCGT 58.434 34.615 0.00 0.00 40.94 4.69
2664 2677 7.710907 TGACATTTGTTCTAGGATAAGATTCCG 59.289 37.037 0.00 0.00 40.94 4.30
2665 2678 8.964476 TGACATTTGTTCTAGGATAAGATTCC 57.036 34.615 0.00 0.00 35.90 3.01
2668 2681 9.965902 ACTTTGACATTTGTTCTAGGATAAGAT 57.034 29.630 0.00 0.00 0.00 2.40
2669 2682 9.436957 GACTTTGACATTTGTTCTAGGATAAGA 57.563 33.333 0.00 0.00 0.00 2.10
2670 2683 8.383619 CGACTTTGACATTTGTTCTAGGATAAG 58.616 37.037 0.00 0.00 0.00 1.73
2671 2684 7.148474 GCGACTTTGACATTTGTTCTAGGATAA 60.148 37.037 0.00 0.00 0.00 1.75
2672 2685 6.312918 GCGACTTTGACATTTGTTCTAGGATA 59.687 38.462 0.00 0.00 0.00 2.59
2673 2686 5.122396 GCGACTTTGACATTTGTTCTAGGAT 59.878 40.000 0.00 0.00 0.00 3.24
2674 2687 4.451096 GCGACTTTGACATTTGTTCTAGGA 59.549 41.667 0.00 0.00 0.00 2.94
2675 2688 4.378459 GGCGACTTTGACATTTGTTCTAGG 60.378 45.833 0.00 0.00 0.00 3.02
2676 2689 4.666655 CGGCGACTTTGACATTTGTTCTAG 60.667 45.833 0.00 0.00 0.00 2.43
2677 2690 3.185594 CGGCGACTTTGACATTTGTTCTA 59.814 43.478 0.00 0.00 0.00 2.10
2678 2691 2.032030 CGGCGACTTTGACATTTGTTCT 60.032 45.455 0.00 0.00 0.00 3.01
2679 2692 2.286772 ACGGCGACTTTGACATTTGTTC 60.287 45.455 16.62 0.00 0.00 3.18
2680 2693 1.673920 ACGGCGACTTTGACATTTGTT 59.326 42.857 16.62 0.00 0.00 2.83
2681 2694 1.305201 ACGGCGACTTTGACATTTGT 58.695 45.000 16.62 0.00 0.00 2.83
2682 2695 2.412325 GGTACGGCGACTTTGACATTTG 60.412 50.000 16.62 0.00 0.00 2.32
2683 2696 1.802365 GGTACGGCGACTTTGACATTT 59.198 47.619 16.62 0.00 0.00 2.32
2684 2697 1.270412 TGGTACGGCGACTTTGACATT 60.270 47.619 16.62 0.00 0.00 2.71
2685 2698 0.319083 TGGTACGGCGACTTTGACAT 59.681 50.000 16.62 0.00 0.00 3.06
2686 2699 0.104487 TTGGTACGGCGACTTTGACA 59.896 50.000 16.62 0.00 0.00 3.58
2687 2700 1.435577 ATTGGTACGGCGACTTTGAC 58.564 50.000 16.62 1.00 0.00 3.18
2688 2701 2.995258 GTTATTGGTACGGCGACTTTGA 59.005 45.455 16.62 0.00 0.00 2.69
2689 2702 2.094734 GGTTATTGGTACGGCGACTTTG 59.905 50.000 16.62 0.00 0.00 2.77
2690 2703 2.349590 GGTTATTGGTACGGCGACTTT 58.650 47.619 16.62 0.00 0.00 2.66
2691 2704 1.736696 CGGTTATTGGTACGGCGACTT 60.737 52.381 16.62 0.00 0.00 3.01
2692 2705 0.179129 CGGTTATTGGTACGGCGACT 60.179 55.000 16.62 0.00 0.00 4.18
2693 2706 1.147557 CCGGTTATTGGTACGGCGAC 61.148 60.000 16.62 7.47 39.85 5.19
2694 2707 1.141449 CCGGTTATTGGTACGGCGA 59.859 57.895 16.62 0.00 39.85 5.54
2695 2708 3.708741 CCGGTTATTGGTACGGCG 58.291 61.111 4.80 4.80 39.85 6.46
2698 2711 0.728542 GTTGGCCGGTTATTGGTACG 59.271 55.000 1.90 0.00 0.00 3.67
2699 2712 1.741145 CAGTTGGCCGGTTATTGGTAC 59.259 52.381 1.90 0.00 0.00 3.34
2700 2713 1.951424 GCAGTTGGCCGGTTATTGGTA 60.951 52.381 1.90 0.00 36.11 3.25
2701 2714 1.248101 GCAGTTGGCCGGTTATTGGT 61.248 55.000 1.90 0.00 36.11 3.67
2702 2715 1.247419 TGCAGTTGGCCGGTTATTGG 61.247 55.000 1.90 0.00 43.89 3.16
2703 2716 0.817013 ATGCAGTTGGCCGGTTATTG 59.183 50.000 1.90 0.00 43.89 1.90
2704 2717 0.817013 CATGCAGTTGGCCGGTTATT 59.183 50.000 1.90 0.00 43.89 1.40
2705 2718 1.666209 GCATGCAGTTGGCCGGTTAT 61.666 55.000 14.21 0.00 43.89 1.89
2706 2719 2.339556 GCATGCAGTTGGCCGGTTA 61.340 57.895 14.21 0.00 43.89 2.85
2707 2720 3.683937 GCATGCAGTTGGCCGGTT 61.684 61.111 14.21 0.00 43.89 4.44
2710 2723 4.764336 CACGCATGCAGTTGGCCG 62.764 66.667 19.57 0.50 43.89 6.13
2720 2733 1.534163 CTATCAAGGGATGCACGCATG 59.466 52.381 9.70 0.00 36.70 4.06
2721 2734 1.417517 TCTATCAAGGGATGCACGCAT 59.582 47.619 3.71 3.71 39.69 4.73
2722 2735 0.829990 TCTATCAAGGGATGCACGCA 59.170 50.000 0.00 0.00 34.89 5.24
2723 2736 1.221414 GTCTATCAAGGGATGCACGC 58.779 55.000 0.00 0.00 34.89 5.34
2724 2737 2.205074 GTGTCTATCAAGGGATGCACG 58.795 52.381 0.00 0.00 34.89 5.34
2725 2738 3.201290 CTGTGTCTATCAAGGGATGCAC 58.799 50.000 0.00 0.00 34.89 4.57
2726 2739 2.840038 ACTGTGTCTATCAAGGGATGCA 59.160 45.455 0.00 0.00 34.89 3.96
2727 2740 3.118629 TCACTGTGTCTATCAAGGGATGC 60.119 47.826 7.79 0.00 34.89 3.91
2728 2741 4.743057 TCACTGTGTCTATCAAGGGATG 57.257 45.455 7.79 0.00 34.89 3.51
2729 2742 4.718774 ACATCACTGTGTCTATCAAGGGAT 59.281 41.667 7.79 0.00 34.16 3.85
2730 2743 4.096681 ACATCACTGTGTCTATCAAGGGA 58.903 43.478 7.79 0.00 33.22 4.20
2731 2744 4.478206 ACATCACTGTGTCTATCAAGGG 57.522 45.455 7.79 0.00 33.22 3.95
2732 2745 5.987953 CCATACATCACTGTGTCTATCAAGG 59.012 44.000 7.79 0.00 36.79 3.61
2733 2746 6.478016 CACCATACATCACTGTGTCTATCAAG 59.522 42.308 7.79 0.00 36.79 3.02
2734 2747 6.154363 TCACCATACATCACTGTGTCTATCAA 59.846 38.462 7.79 0.00 36.79 2.57
2735 2748 5.656416 TCACCATACATCACTGTGTCTATCA 59.344 40.000 7.79 0.00 36.79 2.15
2736 2749 6.149129 TCACCATACATCACTGTGTCTATC 57.851 41.667 7.79 0.00 36.79 2.08
2737 2750 6.544928 TTCACCATACATCACTGTGTCTAT 57.455 37.500 7.79 0.00 36.79 1.98
2738 2751 5.993748 TTCACCATACATCACTGTGTCTA 57.006 39.130 7.79 0.00 36.79 2.59
2739 2752 4.890158 TTCACCATACATCACTGTGTCT 57.110 40.909 7.79 0.00 36.79 3.41
2740 2753 5.334879 GGTTTTCACCATACATCACTGTGTC 60.335 44.000 7.79 0.00 43.61 3.67
2741 2754 4.518970 GGTTTTCACCATACATCACTGTGT 59.481 41.667 7.79 0.00 43.61 3.72
2742 2755 5.046910 GGTTTTCACCATACATCACTGTG 57.953 43.478 0.17 0.17 43.61 3.66
2755 2768 7.454260 AAAGATCATGAACTAGGTTTTCACC 57.546 36.000 5.85 0.00 44.67 4.02
2756 2769 8.567948 TGAAAAGATCATGAACTAGGTTTTCAC 58.432 33.333 18.92 4.26 37.60 3.18
2757 2770 8.567948 GTGAAAAGATCATGAACTAGGTTTTCA 58.432 33.333 18.92 18.92 40.97 2.69
2758 2771 8.567948 TGTGAAAAGATCATGAACTAGGTTTTC 58.432 33.333 15.61 15.61 40.97 2.29
2759 2772 8.352942 GTGTGAAAAGATCATGAACTAGGTTTT 58.647 33.333 5.85 3.25 40.97 2.43
2760 2773 7.721399 AGTGTGAAAAGATCATGAACTAGGTTT 59.279 33.333 5.85 3.60 40.97 3.27
2761 2774 7.227156 AGTGTGAAAAGATCATGAACTAGGTT 58.773 34.615 5.85 1.53 40.97 3.50
2762 2775 6.773638 AGTGTGAAAAGATCATGAACTAGGT 58.226 36.000 5.85 0.00 40.97 3.08
2763 2776 7.678947 AAGTGTGAAAAGATCATGAACTAGG 57.321 36.000 5.85 0.00 40.97 3.02
2764 2777 8.777413 TCAAAGTGTGAAAAGATCATGAACTAG 58.223 33.333 5.85 0.00 40.97 2.57
2765 2778 8.675705 TCAAAGTGTGAAAAGATCATGAACTA 57.324 30.769 5.85 0.00 40.97 2.24
2766 2779 7.255381 CCTCAAAGTGTGAAAAGATCATGAACT 60.255 37.037 0.00 0.00 40.97 3.01
2767 2780 6.860023 CCTCAAAGTGTGAAAAGATCATGAAC 59.140 38.462 0.00 0.00 40.97 3.18
2768 2781 6.016024 CCCTCAAAGTGTGAAAAGATCATGAA 60.016 38.462 0.00 0.00 40.97 2.57
2769 2782 5.474532 CCCTCAAAGTGTGAAAAGATCATGA 59.525 40.000 0.00 0.00 40.97 3.07
2770 2783 5.474532 TCCCTCAAAGTGTGAAAAGATCATG 59.525 40.000 0.00 0.00 40.97 3.07
2771 2784 5.634118 TCCCTCAAAGTGTGAAAAGATCAT 58.366 37.500 0.00 0.00 40.97 2.45
2772 2785 5.047566 TCCCTCAAAGTGTGAAAAGATCA 57.952 39.130 0.00 0.00 35.22 2.92
2773 2786 6.391227 TTTCCCTCAAAGTGTGAAAAGATC 57.609 37.500 0.00 0.00 35.22 2.75
2774 2787 6.790232 TTTTCCCTCAAAGTGTGAAAAGAT 57.210 33.333 0.00 0.00 35.22 2.40
2775 2788 6.597832 TTTTTCCCTCAAAGTGTGAAAAGA 57.402 33.333 0.00 0.00 36.58 2.52
2795 2808 7.294017 TCTTCTCTTGATTTGCTCCATTTTT 57.706 32.000 0.00 0.00 0.00 1.94
2796 2809 6.906157 TCTTCTCTTGATTTGCTCCATTTT 57.094 33.333 0.00 0.00 0.00 1.82
2797 2810 6.266103 TGTTCTTCTCTTGATTTGCTCCATTT 59.734 34.615 0.00 0.00 0.00 2.32
2798 2811 5.771666 TGTTCTTCTCTTGATTTGCTCCATT 59.228 36.000 0.00 0.00 0.00 3.16
2799 2812 5.182760 GTGTTCTTCTCTTGATTTGCTCCAT 59.817 40.000 0.00 0.00 0.00 3.41
2800 2813 4.516698 GTGTTCTTCTCTTGATTTGCTCCA 59.483 41.667 0.00 0.00 0.00 3.86
2801 2814 4.516698 TGTGTTCTTCTCTTGATTTGCTCC 59.483 41.667 0.00 0.00 0.00 4.70
2802 2815 5.679734 TGTGTTCTTCTCTTGATTTGCTC 57.320 39.130 0.00 0.00 0.00 4.26
2803 2816 6.455360 TTTGTGTTCTTCTCTTGATTTGCT 57.545 33.333 0.00 0.00 0.00 3.91
2804 2817 7.436080 TCATTTTGTGTTCTTCTCTTGATTTGC 59.564 33.333 0.00 0.00 0.00 3.68
2805 2818 8.861033 TCATTTTGTGTTCTTCTCTTGATTTG 57.139 30.769 0.00 0.00 0.00 2.32
2806 2819 9.305925 GTTCATTTTGTGTTCTTCTCTTGATTT 57.694 29.630 0.00 0.00 0.00 2.17
2807 2820 8.469200 TGTTCATTTTGTGTTCTTCTCTTGATT 58.531 29.630 0.00 0.00 0.00 2.57
2808 2821 7.917505 GTGTTCATTTTGTGTTCTTCTCTTGAT 59.082 33.333 0.00 0.00 0.00 2.57
2809 2822 7.121168 AGTGTTCATTTTGTGTTCTTCTCTTGA 59.879 33.333 0.00 0.00 0.00 3.02
2810 2823 7.253422 AGTGTTCATTTTGTGTTCTTCTCTTG 58.747 34.615 0.00 0.00 0.00 3.02
2811 2824 7.121168 TGAGTGTTCATTTTGTGTTCTTCTCTT 59.879 33.333 0.00 0.00 0.00 2.85
2812 2825 6.599244 TGAGTGTTCATTTTGTGTTCTTCTCT 59.401 34.615 0.00 0.00 0.00 3.10
2813 2826 6.785191 TGAGTGTTCATTTTGTGTTCTTCTC 58.215 36.000 0.00 0.00 0.00 2.87
2814 2827 6.757897 TGAGTGTTCATTTTGTGTTCTTCT 57.242 33.333 0.00 0.00 0.00 2.85
2815 2828 7.810766 TTTGAGTGTTCATTTTGTGTTCTTC 57.189 32.000 0.00 0.00 32.27 2.87
2816 2829 8.034215 TCATTTGAGTGTTCATTTTGTGTTCTT 58.966 29.630 0.00 0.00 32.27 2.52
2817 2830 7.489113 GTCATTTGAGTGTTCATTTTGTGTTCT 59.511 33.333 0.00 0.00 32.27 3.01
2818 2831 7.275341 TGTCATTTGAGTGTTCATTTTGTGTTC 59.725 33.333 0.00 0.00 32.27 3.18
2819 2832 7.095910 TGTCATTTGAGTGTTCATTTTGTGTT 58.904 30.769 0.00 0.00 32.27 3.32
2820 2833 6.629128 TGTCATTTGAGTGTTCATTTTGTGT 58.371 32.000 0.00 0.00 32.27 3.72
2821 2834 6.974048 TCTGTCATTTGAGTGTTCATTTTGTG 59.026 34.615 0.00 0.00 32.27 3.33
2822 2835 7.067372 TCTCTGTCATTTGAGTGTTCATTTTGT 59.933 33.333 0.00 0.00 32.27 2.83
2823 2836 7.420002 TCTCTGTCATTTGAGTGTTCATTTTG 58.580 34.615 0.00 0.00 32.27 2.44
2824 2837 7.572523 TCTCTGTCATTTGAGTGTTCATTTT 57.427 32.000 0.00 0.00 32.27 1.82
2825 2838 7.756395 ATCTCTGTCATTTGAGTGTTCATTT 57.244 32.000 0.00 0.00 32.27 2.32
2826 2839 7.446319 TGAATCTCTGTCATTTGAGTGTTCATT 59.554 33.333 0.00 0.00 34.57 2.57
2827 2840 6.938596 TGAATCTCTGTCATTTGAGTGTTCAT 59.061 34.615 0.00 0.00 34.57 2.57
2828 2841 6.290605 TGAATCTCTGTCATTTGAGTGTTCA 58.709 36.000 0.00 0.00 35.72 3.18
2829 2842 6.791887 TGAATCTCTGTCATTTGAGTGTTC 57.208 37.500 0.00 0.00 32.45 3.18
2830 2843 7.446319 TGATTGAATCTCTGTCATTTGAGTGTT 59.554 33.333 6.73 0.00 0.00 3.32
2831 2844 6.938596 TGATTGAATCTCTGTCATTTGAGTGT 59.061 34.615 6.73 0.00 0.00 3.55
2832 2845 7.094933 TGTGATTGAATCTCTGTCATTTGAGTG 60.095 37.037 6.73 0.00 0.00 3.51
2833 2846 6.938596 TGTGATTGAATCTCTGTCATTTGAGT 59.061 34.615 6.73 0.00 0.00 3.41
2834 2847 7.094933 TGTGTGATTGAATCTCTGTCATTTGAG 60.095 37.037 6.73 0.00 0.00 3.02
2835 2848 6.711645 TGTGTGATTGAATCTCTGTCATTTGA 59.288 34.615 6.73 0.00 0.00 2.69
2836 2849 6.905578 TGTGTGATTGAATCTCTGTCATTTG 58.094 36.000 6.73 0.00 0.00 2.32
2837 2850 7.698506 ATGTGTGATTGAATCTCTGTCATTT 57.301 32.000 6.73 0.00 0.00 2.32
2838 2851 8.837389 CATATGTGTGATTGAATCTCTGTCATT 58.163 33.333 6.73 0.85 0.00 2.57
2839 2852 7.991460 ACATATGTGTGATTGAATCTCTGTCAT 59.009 33.333 7.78 10.83 37.14 3.06
2840 2853 7.333323 ACATATGTGTGATTGAATCTCTGTCA 58.667 34.615 7.78 5.15 37.14 3.58
2841 2854 7.783090 ACATATGTGTGATTGAATCTCTGTC 57.217 36.000 7.78 0.16 37.14 3.51
2842 2855 9.671279 TTAACATATGTGTGATTGAATCTCTGT 57.329 29.630 9.63 0.75 38.92 3.41
2849 2862 9.018582 TGTGGATTTAACATATGTGTGATTGAA 57.981 29.630 9.63 0.00 38.92 2.69
2850 2863 8.572855 TGTGGATTTAACATATGTGTGATTGA 57.427 30.769 9.63 0.00 38.92 2.57
2853 2866 9.625747 TGTATGTGGATTTAACATATGTGTGAT 57.374 29.630 9.63 3.57 41.31 3.06
2854 2867 8.888716 GTGTATGTGGATTTAACATATGTGTGA 58.111 33.333 9.63 0.00 41.31 3.58
2855 2868 8.672815 TGTGTATGTGGATTTAACATATGTGTG 58.327 33.333 9.63 0.00 41.31 3.82
2856 2869 8.800370 TGTGTATGTGGATTTAACATATGTGT 57.200 30.769 9.63 2.63 41.31 3.72
2861 2874 9.996554 CCTCTATGTGTATGTGGATTTAACATA 57.003 33.333 0.00 0.00 39.05 2.29
2862 2875 7.939039 CCCTCTATGTGTATGTGGATTTAACAT 59.061 37.037 0.00 0.00 41.14 2.71
2863 2876 7.126573 TCCCTCTATGTGTATGTGGATTTAACA 59.873 37.037 0.00 0.00 0.00 2.41
2864 2877 7.506114 TCCCTCTATGTGTATGTGGATTTAAC 58.494 38.462 0.00 0.00 0.00 2.01
2865 2878 7.684317 TCCCTCTATGTGTATGTGGATTTAA 57.316 36.000 0.00 0.00 0.00 1.52
2866 2879 7.872061 ATCCCTCTATGTGTATGTGGATTTA 57.128 36.000 0.00 0.00 0.00 1.40
2867 2880 6.770286 ATCCCTCTATGTGTATGTGGATTT 57.230 37.500 0.00 0.00 0.00 2.17
2868 2881 6.787458 TGTATCCCTCTATGTGTATGTGGATT 59.213 38.462 0.00 0.00 33.60 3.01
2869 2882 6.322931 TGTATCCCTCTATGTGTATGTGGAT 58.677 40.000 0.00 0.00 35.62 3.41
2870 2883 5.711698 TGTATCCCTCTATGTGTATGTGGA 58.288 41.667 0.00 0.00 0.00 4.02
2871 2884 6.419484 TTGTATCCCTCTATGTGTATGTGG 57.581 41.667 0.00 0.00 0.00 4.17
2872 2885 6.459066 CCTTGTATCCCTCTATGTGTATGTG 58.541 44.000 0.00 0.00 0.00 3.21
2873 2886 5.544176 CCCTTGTATCCCTCTATGTGTATGT 59.456 44.000 0.00 0.00 0.00 2.29
2874 2887 5.544176 ACCCTTGTATCCCTCTATGTGTATG 59.456 44.000 0.00 0.00 0.00 2.39
2875 2888 5.727630 ACCCTTGTATCCCTCTATGTGTAT 58.272 41.667 0.00 0.00 0.00 2.29
2876 2889 5.145564 GACCCTTGTATCCCTCTATGTGTA 58.854 45.833 0.00 0.00 0.00 2.90
2877 2890 3.967987 GACCCTTGTATCCCTCTATGTGT 59.032 47.826 0.00 0.00 0.00 3.72
2878 2891 3.325135 GGACCCTTGTATCCCTCTATGTG 59.675 52.174 0.00 0.00 0.00 3.21
2879 2892 3.051341 TGGACCCTTGTATCCCTCTATGT 60.051 47.826 0.00 0.00 33.69 2.29
2880 2893 3.587498 TGGACCCTTGTATCCCTCTATG 58.413 50.000 0.00 0.00 33.69 2.23
2881 2894 4.235372 CTTGGACCCTTGTATCCCTCTAT 58.765 47.826 0.00 0.00 33.69 1.98
2882 2895 3.013648 ACTTGGACCCTTGTATCCCTCTA 59.986 47.826 0.00 0.00 33.69 2.43
2883 2896 2.225908 ACTTGGACCCTTGTATCCCTCT 60.226 50.000 0.00 0.00 33.69 3.69
2884 2897 2.170817 GACTTGGACCCTTGTATCCCTC 59.829 54.545 0.00 0.00 33.69 4.30
2885 2898 2.197465 GACTTGGACCCTTGTATCCCT 58.803 52.381 0.00 0.00 33.69 4.20
2886 2899 1.212195 GGACTTGGACCCTTGTATCCC 59.788 57.143 0.00 0.00 33.69 3.85
2887 2900 1.913419 TGGACTTGGACCCTTGTATCC 59.087 52.381 0.00 0.00 35.37 2.59
2888 2901 3.244770 TGTTGGACTTGGACCCTTGTATC 60.245 47.826 0.00 0.00 0.00 2.24
2889 2902 2.714250 TGTTGGACTTGGACCCTTGTAT 59.286 45.455 0.00 0.00 0.00 2.29
2890 2903 2.128535 TGTTGGACTTGGACCCTTGTA 58.871 47.619 0.00 0.00 0.00 2.41
2891 2904 0.923358 TGTTGGACTTGGACCCTTGT 59.077 50.000 0.00 0.00 0.00 3.16
2892 2905 1.318576 GTGTTGGACTTGGACCCTTG 58.681 55.000 0.00 0.00 0.00 3.61
2893 2906 0.923358 TGTGTTGGACTTGGACCCTT 59.077 50.000 0.00 0.00 0.00 3.95
2894 2907 0.923358 TTGTGTTGGACTTGGACCCT 59.077 50.000 0.00 0.00 0.00 4.34
2895 2908 1.133915 TCTTGTGTTGGACTTGGACCC 60.134 52.381 0.00 0.00 0.00 4.46
2896 2909 2.222027 CTCTTGTGTTGGACTTGGACC 58.778 52.381 0.00 0.00 0.00 4.46
2897 2910 2.222027 CCTCTTGTGTTGGACTTGGAC 58.778 52.381 0.00 0.00 0.00 4.02
2898 2911 1.142870 CCCTCTTGTGTTGGACTTGGA 59.857 52.381 0.00 0.00 0.00 3.53
2899 2912 1.609208 CCCTCTTGTGTTGGACTTGG 58.391 55.000 0.00 0.00 0.00 3.61
2900 2913 0.954452 GCCCTCTTGTGTTGGACTTG 59.046 55.000 0.00 0.00 0.00 3.16
2901 2914 0.550914 TGCCCTCTTGTGTTGGACTT 59.449 50.000 0.00 0.00 0.00 3.01
2902 2915 0.550914 TTGCCCTCTTGTGTTGGACT 59.449 50.000 0.00 0.00 0.00 3.85
2903 2916 1.067060 GTTTGCCCTCTTGTGTTGGAC 59.933 52.381 0.00 0.00 0.00 4.02
2904 2917 1.398692 GTTTGCCCTCTTGTGTTGGA 58.601 50.000 0.00 0.00 0.00 3.53
2905 2918 0.030638 CGTTTGCCCTCTTGTGTTGG 59.969 55.000 0.00 0.00 0.00 3.77
2906 2919 1.002468 CTCGTTTGCCCTCTTGTGTTG 60.002 52.381 0.00 0.00 0.00 3.33
2907 2920 1.308998 CTCGTTTGCCCTCTTGTGTT 58.691 50.000 0.00 0.00 0.00 3.32
2908 2921 0.535102 CCTCGTTTGCCCTCTTGTGT 60.535 55.000 0.00 0.00 0.00 3.72
2909 2922 0.250295 TCCTCGTTTGCCCTCTTGTG 60.250 55.000 0.00 0.00 0.00 3.33
2910 2923 0.472471 TTCCTCGTTTGCCCTCTTGT 59.528 50.000 0.00 0.00 0.00 3.16
2911 2924 0.875059 GTTCCTCGTTTGCCCTCTTG 59.125 55.000 0.00 0.00 0.00 3.02
2912 2925 0.765510 AGTTCCTCGTTTGCCCTCTT 59.234 50.000 0.00 0.00 0.00 2.85
2913 2926 1.550976 CTAGTTCCTCGTTTGCCCTCT 59.449 52.381 0.00 0.00 0.00 3.69
2914 2927 1.275573 ACTAGTTCCTCGTTTGCCCTC 59.724 52.381 0.00 0.00 0.00 4.30
2915 2928 1.349067 ACTAGTTCCTCGTTTGCCCT 58.651 50.000 0.00 0.00 0.00 5.19
2916 2929 2.074576 GAACTAGTTCCTCGTTTGCCC 58.925 52.381 22.74 0.00 33.64 5.36
2917 2930 2.762745 TGAACTAGTTCCTCGTTTGCC 58.237 47.619 28.43 5.10 38.77 4.52
2918 2931 3.371285 GGATGAACTAGTTCCTCGTTTGC 59.629 47.826 28.43 13.54 38.77 3.68
2919 2932 3.933332 GGGATGAACTAGTTCCTCGTTTG 59.067 47.826 28.43 0.00 38.77 2.93
2920 2933 3.581332 TGGGATGAACTAGTTCCTCGTTT 59.419 43.478 28.43 9.77 38.77 3.60
2921 2934 3.170717 TGGGATGAACTAGTTCCTCGTT 58.829 45.455 28.43 11.33 38.77 3.85
2922 2935 2.816411 TGGGATGAACTAGTTCCTCGT 58.184 47.619 28.43 14.45 38.77 4.18
2923 2936 3.887621 TTGGGATGAACTAGTTCCTCG 57.112 47.619 28.43 0.00 38.77 4.63
2924 2937 4.410555 AGGATTGGGATGAACTAGTTCCTC 59.589 45.833 28.43 26.45 38.77 3.71
2925 2938 4.375313 AGGATTGGGATGAACTAGTTCCT 58.625 43.478 28.43 20.95 38.77 3.36
2926 2939 4.779993 AGGATTGGGATGAACTAGTTCC 57.220 45.455 28.43 16.82 38.77 3.62
2941 2954 4.006319 GACCTCAACTCCTTCAAGGATTG 58.994 47.826 6.60 13.30 44.81 2.67
2942 2955 3.913163 AGACCTCAACTCCTTCAAGGATT 59.087 43.478 6.60 0.00 44.81 3.01
2943 2956 3.525862 AGACCTCAACTCCTTCAAGGAT 58.474 45.455 6.60 0.00 44.81 3.24
2944 2957 2.977808 AGACCTCAACTCCTTCAAGGA 58.022 47.619 5.84 5.84 43.43 3.36
2945 2958 3.778954 AAGACCTCAACTCCTTCAAGG 57.221 47.619 0.00 0.00 36.46 3.61
2946 2959 4.455606 ACAAAGACCTCAACTCCTTCAAG 58.544 43.478 0.00 0.00 0.00 3.02
2947 2960 4.503714 ACAAAGACCTCAACTCCTTCAA 57.496 40.909 0.00 0.00 0.00 2.69
2948 2961 5.280011 GGATACAAAGACCTCAACTCCTTCA 60.280 44.000 0.00 0.00 0.00 3.02
2949 2962 5.179533 GGATACAAAGACCTCAACTCCTTC 58.820 45.833 0.00 0.00 0.00 3.46
2950 2963 5.167303 GGATACAAAGACCTCAACTCCTT 57.833 43.478 0.00 0.00 0.00 3.36
2951 2964 4.828072 GGATACAAAGACCTCAACTCCT 57.172 45.455 0.00 0.00 0.00 3.69
2971 2984 1.885049 TCCAGGGAAGATCCTCTTGG 58.115 55.000 8.34 8.34 36.73 3.61
2985 2998 0.329596 CAAGACCCCTTCCTTCCAGG 59.670 60.000 0.00 0.00 36.46 4.45
2986 2999 1.362224 TCAAGACCCCTTCCTTCCAG 58.638 55.000 0.00 0.00 0.00 3.86
2987 3000 1.827792 TTCAAGACCCCTTCCTTCCA 58.172 50.000 0.00 0.00 0.00 3.53
2988 3001 2.357257 GGATTCAAGACCCCTTCCTTCC 60.357 54.545 0.00 0.00 0.00 3.46
2989 3002 2.308866 TGGATTCAAGACCCCTTCCTTC 59.691 50.000 0.00 0.00 0.00 3.46
2990 3003 2.358258 TGGATTCAAGACCCCTTCCTT 58.642 47.619 0.00 0.00 0.00 3.36
2991 3004 2.059756 TGGATTCAAGACCCCTTCCT 57.940 50.000 0.00 0.00 0.00 3.36
2992 3005 3.388552 AATGGATTCAAGACCCCTTCC 57.611 47.619 0.00 0.00 0.00 3.46
2993 3006 3.448660 CCAAATGGATTCAAGACCCCTTC 59.551 47.826 0.00 0.00 37.39 3.46
2994 3007 3.077391 TCCAAATGGATTCAAGACCCCTT 59.923 43.478 0.00 0.00 39.78 3.95
2995 3008 2.654385 TCCAAATGGATTCAAGACCCCT 59.346 45.455 0.00 0.00 39.78 4.79
2996 3009 3.026694 CTCCAAATGGATTCAAGACCCC 58.973 50.000 1.93 0.00 44.46 4.95
2997 3010 3.968265 TCTCCAAATGGATTCAAGACCC 58.032 45.455 1.93 0.00 44.46 4.46
2998 3011 5.444176 AGATCTCCAAATGGATTCAAGACC 58.556 41.667 1.93 0.00 44.46 3.85
2999 3012 6.827762 AGAAGATCTCCAAATGGATTCAAGAC 59.172 38.462 13.29 1.44 44.46 3.01
3000 3013 6.966751 AGAAGATCTCCAAATGGATTCAAGA 58.033 36.000 13.29 4.20 44.46 3.02
3001 3014 7.055378 AGAGAAGATCTCCAAATGGATTCAAG 58.945 38.462 13.29 0.00 44.42 3.02
3002 3015 6.966751 AGAGAAGATCTCCAAATGGATTCAA 58.033 36.000 13.29 0.00 44.42 2.69
3003 3016 6.572182 AGAGAAGATCTCCAAATGGATTCA 57.428 37.500 13.29 0.00 44.42 2.57
3016 3029 2.699846 GCCTCCATGTGAGAGAAGATCT 59.300 50.000 11.48 0.00 44.42 2.75
3017 3030 2.224257 GGCCTCCATGTGAGAGAAGATC 60.224 54.545 11.48 0.00 44.42 2.75
3018 3031 1.767681 GGCCTCCATGTGAGAGAAGAT 59.232 52.381 11.48 0.00 44.42 2.40
3019 3032 1.198713 GGCCTCCATGTGAGAGAAGA 58.801 55.000 11.48 0.00 44.42 2.87
3020 3033 1.202330 AGGCCTCCATGTGAGAGAAG 58.798 55.000 0.00 0.00 44.42 2.85
3021 3034 1.280133 CAAGGCCTCCATGTGAGAGAA 59.720 52.381 5.23 0.00 44.42 2.87
3022 3035 0.907486 CAAGGCCTCCATGTGAGAGA 59.093 55.000 5.23 0.00 44.42 3.10
3023 3036 0.907486 TCAAGGCCTCCATGTGAGAG 59.093 55.000 5.23 2.29 44.42 3.20
3024 3037 1.487976 GATCAAGGCCTCCATGTGAGA 59.512 52.381 5.23 0.00 44.42 3.27
3025 3038 1.489649 AGATCAAGGCCTCCATGTGAG 59.510 52.381 5.23 4.67 41.07 3.51
3026 3039 1.487976 GAGATCAAGGCCTCCATGTGA 59.512 52.381 5.23 6.04 0.00 3.58
3027 3040 1.476471 GGAGATCAAGGCCTCCATGTG 60.476 57.143 5.23 0.00 46.28 3.21
3028 3041 0.842635 GGAGATCAAGGCCTCCATGT 59.157 55.000 5.23 0.00 46.28 3.21
3029 3042 3.721793 GGAGATCAAGGCCTCCATG 57.278 57.895 5.23 0.00 46.28 3.66
3032 3045 1.478288 CCAATGGAGATCAAGGCCTCC 60.478 57.143 5.23 1.70 46.99 4.30
3033 3046 1.492176 TCCAATGGAGATCAAGGCCTC 59.508 52.381 5.23 0.00 0.00 4.70
3034 3047 1.600058 TCCAATGGAGATCAAGGCCT 58.400 50.000 0.00 0.00 0.00 5.19
3045 3058 1.625228 CCCACCTACCTCTCCAATGGA 60.625 57.143 0.48 0.48 0.00 3.41
3046 3059 0.839946 CCCACCTACCTCTCCAATGG 59.160 60.000 0.00 0.00 0.00 3.16
3047 3060 0.181350 GCCCACCTACCTCTCCAATG 59.819 60.000 0.00 0.00 0.00 2.82
3048 3061 1.338136 CGCCCACCTACCTCTCCAAT 61.338 60.000 0.00 0.00 0.00 3.16
3049 3062 1.987855 CGCCCACCTACCTCTCCAA 60.988 63.158 0.00 0.00 0.00 3.53
3050 3063 2.363795 CGCCCACCTACCTCTCCA 60.364 66.667 0.00 0.00 0.00 3.86
3051 3064 2.043248 TCGCCCACCTACCTCTCC 60.043 66.667 0.00 0.00 0.00 3.71
3052 3065 2.787567 GCTCGCCCACCTACCTCTC 61.788 68.421 0.00 0.00 0.00 3.20
3053 3066 2.760385 GCTCGCCCACCTACCTCT 60.760 66.667 0.00 0.00 0.00 3.69
3054 3067 2.180159 TTTGCTCGCCCACCTACCTC 62.180 60.000 0.00 0.00 0.00 3.85
3055 3068 1.774894 TTTTGCTCGCCCACCTACCT 61.775 55.000 0.00 0.00 0.00 3.08
3056 3069 1.302993 TTTTGCTCGCCCACCTACC 60.303 57.895 0.00 0.00 0.00 3.18
3057 3070 0.605589 AGTTTTGCTCGCCCACCTAC 60.606 55.000 0.00 0.00 0.00 3.18
3058 3071 1.758592 AGTTTTGCTCGCCCACCTA 59.241 52.632 0.00 0.00 0.00 3.08
3059 3072 2.515901 AGTTTTGCTCGCCCACCT 59.484 55.556 0.00 0.00 0.00 4.00


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.