Multiple sequence alignment - TraesCS2B01G272700
BLAST Results
Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.
qseqid | sseqid | percentage.identical | alignment.length | no.mismatch | no.gap.openings | qstart | qend | sstart | send | evalue | bitscore | |
---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS2B01G272700 | chr2B | 100.000 | 4147 | 0 | 0 | 1 | 4147 | 374001426 | 373997280 | 0.000000e+00 | 7659.0 |
1 | TraesCS2B01G272700 | chr2B | 84.071 | 113 | 7 | 11 | 3998 | 4105 | 773148205 | 773148099 | 9.490000e-17 | 99.0 |
2 | TraesCS2B01G272700 | chr2B | 100.000 | 29 | 0 | 0 | 3431 | 3459 | 453265346 | 453265318 | 2.000000e-03 | 54.7 |
3 | TraesCS2B01G272700 | chr2D | 95.788 | 1021 | 41 | 2 | 3016 | 4036 | 305913664 | 305912646 | 0.000000e+00 | 1646.0 |
4 | TraesCS2B01G272700 | chr2D | 91.360 | 1169 | 95 | 5 | 1812 | 2976 | 305914830 | 305913664 | 0.000000e+00 | 1594.0 |
5 | TraesCS2B01G272700 | chr2D | 92.763 | 608 | 15 | 10 | 688 | 1284 | 305915970 | 305915381 | 0.000000e+00 | 852.0 |
6 | TraesCS2B01G272700 | chr2D | 97.590 | 332 | 7 | 1 | 313 | 644 | 305916300 | 305915970 | 6.020000e-158 | 568.0 |
7 | TraesCS2B01G272700 | chr2D | 94.138 | 290 | 11 | 1 | 1546 | 1829 | 305915168 | 305914879 | 1.770000e-118 | 436.0 |
8 | TraesCS2B01G272700 | chr2D | 90.823 | 316 | 16 | 3 | 1 | 316 | 305916634 | 305916332 | 1.070000e-110 | 411.0 |
9 | TraesCS2B01G272700 | chr2D | 98.429 | 191 | 2 | 1 | 1278 | 1468 | 305915355 | 305915166 | 6.640000e-88 | 335.0 |
10 | TraesCS2B01G272700 | chr2D | 97.183 | 71 | 2 | 0 | 4032 | 4102 | 381199455 | 381199385 | 2.020000e-23 | 121.0 |
11 | TraesCS2B01G272700 | chr2A | 93.016 | 1031 | 54 | 12 | 1546 | 2567 | 384893453 | 384892432 | 0.000000e+00 | 1489.0 |
12 | TraesCS2B01G272700 | chr2A | 93.308 | 792 | 27 | 9 | 688 | 1468 | 384894227 | 384893451 | 0.000000e+00 | 1146.0 |
13 | TraesCS2B01G272700 | chr2A | 94.507 | 710 | 35 | 3 | 3018 | 3726 | 384891937 | 384891231 | 0.000000e+00 | 1092.0 |
14 | TraesCS2B01G272700 | chr2A | 94.940 | 336 | 14 | 3 | 310 | 644 | 384894565 | 384894232 | 1.320000e-144 | 523.0 |
15 | TraesCS2B01G272700 | chr2A | 89.078 | 412 | 44 | 1 | 2566 | 2976 | 384892350 | 384891939 | 1.030000e-140 | 510.0 |
16 | TraesCS2B01G272700 | chr2A | 93.902 | 328 | 15 | 1 | 3709 | 4036 | 384891218 | 384890896 | 1.340000e-134 | 490.0 |
17 | TraesCS2B01G272700 | chr2A | 91.398 | 93 | 6 | 1 | 1458 | 1548 | 49541884 | 49541976 | 4.350000e-25 | 126.0 |
18 | TraesCS2B01G272700 | chr2A | 96.296 | 54 | 2 | 0 | 644 | 697 | 695156813 | 695156866 | 5.710000e-14 | 89.8 |
19 | TraesCS2B01G272700 | chr7B | 94.565 | 92 | 5 | 0 | 1462 | 1553 | 122952584 | 122952493 | 4.320000e-30 | 143.0 |
20 | TraesCS2B01G272700 | chr7B | 94.565 | 92 | 5 | 0 | 1462 | 1553 | 123030604 | 123030513 | 4.320000e-30 | 143.0 |
21 | TraesCS2B01G272700 | chr7B | 97.143 | 70 | 0 | 2 | 4034 | 4101 | 458364546 | 458364477 | 2.620000e-22 | 117.0 |
22 | TraesCS2B01G272700 | chr1B | 94.382 | 89 | 4 | 1 | 1466 | 1553 | 95298303 | 95298215 | 7.230000e-28 | 135.0 |
23 | TraesCS2B01G272700 | chr1B | 89.130 | 46 | 3 | 2 | 3433 | 3477 | 605261225 | 605261269 | 5.790000e-04 | 56.5 |
24 | TraesCS2B01G272700 | chr1D | 93.407 | 91 | 5 | 1 | 1458 | 1548 | 86902143 | 86902054 | 2.600000e-27 | 134.0 |
25 | TraesCS2B01G272700 | chr1D | 94.253 | 87 | 4 | 1 | 1461 | 1547 | 351919287 | 351919202 | 9.350000e-27 | 132.0 |
26 | TraesCS2B01G272700 | chr6D | 95.181 | 83 | 4 | 0 | 1466 | 1548 | 430139666 | 430139584 | 9.350000e-27 | 132.0 |
27 | TraesCS2B01G272700 | chr6D | 91.765 | 85 | 1 | 4 | 4026 | 4104 | 259292208 | 259292292 | 3.390000e-21 | 113.0 |
28 | TraesCS2B01G272700 | chr3D | 92.473 | 93 | 5 | 2 | 1457 | 1548 | 535978870 | 535978961 | 9.350000e-27 | 132.0 |
29 | TraesCS2B01G272700 | chr3D | 100.000 | 49 | 0 | 0 | 644 | 692 | 250919226 | 250919178 | 1.590000e-14 | 91.6 |
30 | TraesCS2B01G272700 | chr3B | 100.000 | 69 | 0 | 0 | 4033 | 4101 | 583376837 | 583376905 | 1.210000e-25 | 128.0 |
31 | TraesCS2B01G272700 | chr7A | 94.048 | 84 | 4 | 1 | 1466 | 1549 | 578987833 | 578987751 | 4.350000e-25 | 126.0 |
32 | TraesCS2B01G272700 | chrUn | 97.183 | 71 | 2 | 0 | 4032 | 4102 | 22340975 | 22340905 | 2.020000e-23 | 121.0 |
33 | TraesCS2B01G272700 | chr5B | 98.529 | 68 | 1 | 0 | 4035 | 4102 | 414456797 | 414456864 | 2.020000e-23 | 121.0 |
34 | TraesCS2B01G272700 | chr5B | 93.421 | 76 | 2 | 1 | 4034 | 4109 | 21588454 | 21588526 | 4.380000e-20 | 110.0 |
35 | TraesCS2B01G272700 | chr5B | 100.000 | 28 | 0 | 0 | 3432 | 3459 | 257332419 | 257332446 | 7.000000e-03 | 52.8 |
36 | TraesCS2B01G272700 | chr5B | 100.000 | 28 | 0 | 0 | 3432 | 3459 | 257528589 | 257528616 | 7.000000e-03 | 52.8 |
37 | TraesCS2B01G272700 | chr7D | 91.667 | 84 | 5 | 2 | 4033 | 4115 | 556285957 | 556285875 | 9.420000e-22 | 115.0 |
38 | TraesCS2B01G272700 | chr7D | 100.000 | 49 | 0 | 0 | 644 | 692 | 45835370 | 45835322 | 1.590000e-14 | 91.6 |
39 | TraesCS2B01G272700 | chr7D | 97.059 | 34 | 1 | 0 | 3426 | 3459 | 208540314 | 208540347 | 1.610000e-04 | 58.4 |
40 | TraesCS2B01G272700 | chr3A | 100.000 | 49 | 0 | 0 | 644 | 692 | 333325219 | 333325267 | 1.590000e-14 | 91.6 |
41 | TraesCS2B01G272700 | chr5A | 96.226 | 53 | 2 | 0 | 644 | 696 | 453187875 | 453187927 | 2.050000e-13 | 87.9 |
42 | TraesCS2B01G272700 | chr4A | 96.226 | 53 | 2 | 0 | 644 | 696 | 107003877 | 107003825 | 2.050000e-13 | 87.9 |
43 | TraesCS2B01G272700 | chr5D | 94.643 | 56 | 2 | 1 | 643 | 698 | 329259358 | 329259304 | 7.390000e-13 | 86.1 |
44 | TraesCS2B01G272700 | chr5D | 97.727 | 44 | 1 | 0 | 646 | 689 | 560011248 | 560011205 | 4.450000e-10 | 76.8 |
45 | TraesCS2B01G272700 | chr1A | 90.476 | 63 | 4 | 1 | 634 | 696 | 6426284 | 6426224 | 9.560000e-12 | 82.4 |
46 | TraesCS2B01G272700 | chr6B | 100.000 | 28 | 0 | 0 | 3432 | 3459 | 656174327 | 656174354 | 7.000000e-03 | 52.8 |
These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.
query | scaffold | start | end | length | rev.comp | avg.bitscore | max.bitscore | avg.percent.identical | query.start | query.end | num_hsp | groupid | homo_length | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS2B01G272700 | chr2B | 373997280 | 374001426 | 4146 | True | 7659.000000 | 7659 | 100.000000 | 1 | 4147 | 1 | chr2B.!!$R1 | 4146 |
1 | TraesCS2B01G272700 | chr2D | 305912646 | 305916634 | 3988 | True | 834.571429 | 1646 | 94.413000 | 1 | 4036 | 7 | chr2D.!!$R2 | 4035 |
2 | TraesCS2B01G272700 | chr2A | 384890896 | 384894565 | 3669 | True | 875.000000 | 1489 | 93.125167 | 310 | 4036 | 6 | chr2A.!!$R1 | 3726 |
AutoCloner calculated primer pairsThese primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
71 | 72 | 0.249398 | GGTGGCATAGTCACGGAGTT | 59.751 | 55.000 | 0.0 | 0.0 | 41.61 | 3.01 | F |
977 | 1024 | 0.252103 | GTCTGTCTGGGTCTGGGGTA | 60.252 | 60.000 | 0.0 | 0.0 | 0.00 | 3.69 | F |
1220 | 1267 | 1.008449 | AGGTACTCCTAGCACCACCAT | 59.992 | 52.381 | 0.0 | 0.0 | 43.12 | 3.55 | F |
1796 | 1889 | 1.279271 | CTAGGTGACTGGGGAAGGTTG | 59.721 | 57.143 | 0.0 | 0.0 | 43.88 | 3.77 | F |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
1775 | 1868 | 0.252742 | ACCTTCCCCAGTCACCTAGG | 60.253 | 60.000 | 7.41 | 7.41 | 0.0 | 3.02 | R |
2338 | 2504 | 0.807667 | GGAGAATGTCAGCGATGCGT | 60.808 | 55.000 | 0.00 | 0.00 | 0.0 | 5.24 | R |
2344 | 2510 | 1.081892 | CAACAGGGAGAATGTCAGCG | 58.918 | 55.000 | 0.00 | 0.00 | 0.0 | 5.18 | R |
3441 | 3693 | 2.156098 | GCCACACTTATTTTGGGACGA | 58.844 | 47.619 | 0.00 | 0.00 | 0.0 | 4.20 | R |
All possible primersListed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
38 | 39 | 1.456287 | GGTGAACTGGCAAGGAGGT | 59.544 | 57.895 | 0.00 | 0.00 | 0.00 | 3.85 |
71 | 72 | 0.249398 | GGTGGCATAGTCACGGAGTT | 59.751 | 55.000 | 0.00 | 0.00 | 41.61 | 3.01 |
74 | 75 | 1.831106 | TGGCATAGTCACGGAGTTCAT | 59.169 | 47.619 | 0.00 | 0.00 | 41.61 | 2.57 |
99 | 100 | 3.522553 | CGGGAGAGGTTAGTGTTCAATC | 58.477 | 50.000 | 0.00 | 0.00 | 0.00 | 2.67 |
115 | 116 | 1.472480 | CAATCCCTAACAACCGCCTTG | 59.528 | 52.381 | 0.00 | 0.00 | 35.77 | 3.61 |
129 | 130 | 1.465794 | GCCTTGTATAACCGCCCAAA | 58.534 | 50.000 | 0.00 | 0.00 | 0.00 | 3.28 |
132 | 133 | 3.876341 | CCTTGTATAACCGCCCAAACTA | 58.124 | 45.455 | 0.00 | 0.00 | 0.00 | 2.24 |
156 | 157 | 2.668212 | CCAACGAAAGGCTGCCGA | 60.668 | 61.111 | 13.96 | 0.00 | 0.00 | 5.54 |
157 | 158 | 2.258013 | CCAACGAAAGGCTGCCGAA | 61.258 | 57.895 | 13.96 | 0.00 | 0.00 | 4.30 |
158 | 159 | 1.652012 | CAACGAAAGGCTGCCGAAA | 59.348 | 52.632 | 13.96 | 0.00 | 0.00 | 3.46 |
159 | 160 | 0.385974 | CAACGAAAGGCTGCCGAAAG | 60.386 | 55.000 | 13.96 | 9.22 | 0.00 | 2.62 |
171 | 172 | 3.221222 | CGAAAGGCCGAGGAGGAT | 58.779 | 61.111 | 0.00 | 0.00 | 45.00 | 3.24 |
222 | 223 | 3.896888 | TGCATGAAAAATGGTGAGTCCTT | 59.103 | 39.130 | 0.00 | 0.00 | 37.07 | 3.36 |
236 | 237 | 1.694696 | AGTCCTTGGTGTGGAAGAGAC | 59.305 | 52.381 | 0.00 | 0.00 | 35.10 | 3.36 |
282 | 283 | 0.393820 | AGGGCCATGTTGCAAAACTG | 59.606 | 50.000 | 6.18 | 0.00 | 0.00 | 3.16 |
307 | 308 | 1.830847 | GGTTTGGGTTGCTTCGGGT | 60.831 | 57.895 | 0.00 | 0.00 | 0.00 | 5.28 |
308 | 309 | 1.396607 | GGTTTGGGTTGCTTCGGGTT | 61.397 | 55.000 | 0.00 | 0.00 | 0.00 | 4.11 |
344 | 380 | 2.170187 | GAGAGATCAGCAGGGTGAACAT | 59.830 | 50.000 | 5.18 | 0.00 | 0.00 | 2.71 |
545 | 582 | 2.373335 | TCTTGCAGCACCCCTAAAAA | 57.627 | 45.000 | 0.00 | 0.00 | 0.00 | 1.94 |
644 | 681 | 3.555586 | GGCAGGAAATGACAAAGCACATT | 60.556 | 43.478 | 0.00 | 0.00 | 36.67 | 2.71 |
645 | 682 | 4.060205 | GCAGGAAATGACAAAGCACATTT | 58.940 | 39.130 | 0.00 | 0.00 | 45.37 | 2.32 |
646 | 683 | 5.229423 | GCAGGAAATGACAAAGCACATTTA | 58.771 | 37.500 | 0.00 | 0.00 | 43.62 | 1.40 |
648 | 685 | 6.449698 | CAGGAAATGACAAAGCACATTTAGT | 58.550 | 36.000 | 0.00 | 0.00 | 43.62 | 2.24 |
661 | 698 | 7.602517 | AGCACATTTAGTGATCTAAACACTC | 57.397 | 36.000 | 0.00 | 0.00 | 45.25 | 3.51 |
662 | 699 | 7.390027 | AGCACATTTAGTGATCTAAACACTCT | 58.610 | 34.615 | 0.00 | 0.00 | 45.25 | 3.24 |
663 | 700 | 7.880195 | AGCACATTTAGTGATCTAAACACTCTT | 59.120 | 33.333 | 0.00 | 0.00 | 45.25 | 2.85 |
682 | 719 | 9.710818 | ACACTCTTATATTAGTTTACAGAGGGA | 57.289 | 33.333 | 2.59 | 0.00 | 34.50 | 4.20 |
684 | 721 | 9.939424 | ACTCTTATATTAGTTTACAGAGGGAGT | 57.061 | 33.333 | 0.00 | 0.00 | 32.21 | 3.85 |
719 | 760 | 1.541670 | GGCGTGTCCCTAAACAACTCA | 60.542 | 52.381 | 0.00 | 0.00 | 0.00 | 3.41 |
758 | 799 | 4.293648 | CGTGCGGACAGGACACCA | 62.294 | 66.667 | 8.11 | 0.00 | 41.69 | 4.17 |
967 | 1014 | 6.516718 | CATATACCTACCTTTGTCTGTCTGG | 58.483 | 44.000 | 0.00 | 0.00 | 0.00 | 3.86 |
968 | 1015 | 1.978580 | ACCTACCTTTGTCTGTCTGGG | 59.021 | 52.381 | 0.00 | 0.00 | 0.00 | 4.45 |
969 | 1016 | 1.978580 | CCTACCTTTGTCTGTCTGGGT | 59.021 | 52.381 | 0.00 | 0.00 | 0.00 | 4.51 |
970 | 1017 | 2.028020 | CCTACCTTTGTCTGTCTGGGTC | 60.028 | 54.545 | 0.00 | 0.00 | 0.00 | 4.46 |
971 | 1018 | 1.807814 | ACCTTTGTCTGTCTGGGTCT | 58.192 | 50.000 | 0.00 | 0.00 | 0.00 | 3.85 |
972 | 1019 | 1.417890 | ACCTTTGTCTGTCTGGGTCTG | 59.582 | 52.381 | 0.00 | 0.00 | 0.00 | 3.51 |
973 | 1020 | 1.271054 | CCTTTGTCTGTCTGGGTCTGG | 60.271 | 57.143 | 0.00 | 0.00 | 0.00 | 3.86 |
974 | 1021 | 0.764890 | TTTGTCTGTCTGGGTCTGGG | 59.235 | 55.000 | 0.00 | 0.00 | 0.00 | 4.45 |
975 | 1022 | 1.127567 | TTGTCTGTCTGGGTCTGGGG | 61.128 | 60.000 | 0.00 | 0.00 | 0.00 | 4.96 |
976 | 1023 | 1.536662 | GTCTGTCTGGGTCTGGGGT | 60.537 | 63.158 | 0.00 | 0.00 | 0.00 | 4.95 |
977 | 1024 | 0.252103 | GTCTGTCTGGGTCTGGGGTA | 60.252 | 60.000 | 0.00 | 0.00 | 0.00 | 3.69 |
1006 | 1053 | 2.771762 | AGGGAGGGAGGATGCAGC | 60.772 | 66.667 | 0.00 | 0.00 | 0.00 | 5.25 |
1089 | 1136 | 4.353437 | GTCCTCGGCGTTGACGGT | 62.353 | 66.667 | 6.85 | 0.00 | 40.23 | 4.83 |
1220 | 1267 | 1.008449 | AGGTACTCCTAGCACCACCAT | 59.992 | 52.381 | 0.00 | 0.00 | 43.12 | 3.55 |
1284 | 1375 | 5.129320 | GCCTGGATTCCACCTGATAATTTTT | 59.871 | 40.000 | 0.00 | 0.00 | 0.00 | 1.94 |
1468 | 1559 | 3.118592 | GGCTCAGGTGCTTATCTGTTACT | 60.119 | 47.826 | 0.00 | 0.00 | 33.13 | 2.24 |
1469 | 1560 | 4.116238 | GCTCAGGTGCTTATCTGTTACTC | 58.884 | 47.826 | 0.00 | 0.00 | 33.13 | 2.59 |
1470 | 1561 | 4.688021 | CTCAGGTGCTTATCTGTTACTCC | 58.312 | 47.826 | 0.00 | 0.00 | 33.13 | 3.85 |
1471 | 1562 | 3.451178 | TCAGGTGCTTATCTGTTACTCCC | 59.549 | 47.826 | 0.00 | 0.00 | 33.13 | 4.30 |
1472 | 1563 | 3.452627 | CAGGTGCTTATCTGTTACTCCCT | 59.547 | 47.826 | 0.00 | 0.00 | 0.00 | 4.20 |
1473 | 1564 | 4.080863 | CAGGTGCTTATCTGTTACTCCCTT | 60.081 | 45.833 | 0.00 | 0.00 | 0.00 | 3.95 |
1474 | 1565 | 4.162509 | AGGTGCTTATCTGTTACTCCCTTC | 59.837 | 45.833 | 0.00 | 0.00 | 0.00 | 3.46 |
1475 | 1566 | 4.081087 | GGTGCTTATCTGTTACTCCCTTCA | 60.081 | 45.833 | 0.00 | 0.00 | 0.00 | 3.02 |
1476 | 1567 | 5.396884 | GGTGCTTATCTGTTACTCCCTTCAT | 60.397 | 44.000 | 0.00 | 0.00 | 0.00 | 2.57 |
1477 | 1568 | 6.116126 | GTGCTTATCTGTTACTCCCTTCATT | 58.884 | 40.000 | 0.00 | 0.00 | 0.00 | 2.57 |
1478 | 1569 | 6.258947 | GTGCTTATCTGTTACTCCCTTCATTC | 59.741 | 42.308 | 0.00 | 0.00 | 0.00 | 2.67 |
1479 | 1570 | 5.760743 | GCTTATCTGTTACTCCCTTCATTCC | 59.239 | 44.000 | 0.00 | 0.00 | 0.00 | 3.01 |
1480 | 1571 | 6.632672 | GCTTATCTGTTACTCCCTTCATTCCA | 60.633 | 42.308 | 0.00 | 0.00 | 0.00 | 3.53 |
1481 | 1572 | 5.779241 | ATCTGTTACTCCCTTCATTCCAA | 57.221 | 39.130 | 0.00 | 0.00 | 0.00 | 3.53 |
1482 | 1573 | 5.576563 | TCTGTTACTCCCTTCATTCCAAA | 57.423 | 39.130 | 0.00 | 0.00 | 0.00 | 3.28 |
1483 | 1574 | 6.139679 | TCTGTTACTCCCTTCATTCCAAAT | 57.860 | 37.500 | 0.00 | 0.00 | 0.00 | 2.32 |
1484 | 1575 | 6.552008 | TCTGTTACTCCCTTCATTCCAAATT | 58.448 | 36.000 | 0.00 | 0.00 | 0.00 | 1.82 |
1485 | 1576 | 7.695055 | TCTGTTACTCCCTTCATTCCAAATTA | 58.305 | 34.615 | 0.00 | 0.00 | 0.00 | 1.40 |
1486 | 1577 | 7.610305 | TCTGTTACTCCCTTCATTCCAAATTAC | 59.390 | 37.037 | 0.00 | 0.00 | 0.00 | 1.89 |
1487 | 1578 | 7.466804 | TGTTACTCCCTTCATTCCAAATTACT | 58.533 | 34.615 | 0.00 | 0.00 | 0.00 | 2.24 |
1488 | 1579 | 7.610305 | TGTTACTCCCTTCATTCCAAATTACTC | 59.390 | 37.037 | 0.00 | 0.00 | 0.00 | 2.59 |
1489 | 1580 | 5.186198 | ACTCCCTTCATTCCAAATTACTCG | 58.814 | 41.667 | 0.00 | 0.00 | 0.00 | 4.18 |
1490 | 1581 | 5.174037 | TCCCTTCATTCCAAATTACTCGT | 57.826 | 39.130 | 0.00 | 0.00 | 0.00 | 4.18 |
1491 | 1582 | 5.183228 | TCCCTTCATTCCAAATTACTCGTC | 58.817 | 41.667 | 0.00 | 0.00 | 0.00 | 4.20 |
1492 | 1583 | 4.034048 | CCCTTCATTCCAAATTACTCGTCG | 59.966 | 45.833 | 0.00 | 0.00 | 0.00 | 5.12 |
1493 | 1584 | 4.630069 | CCTTCATTCCAAATTACTCGTCGT | 59.370 | 41.667 | 0.00 | 0.00 | 0.00 | 4.34 |
1494 | 1585 | 5.445939 | CCTTCATTCCAAATTACTCGTCGTG | 60.446 | 44.000 | 0.00 | 0.00 | 0.00 | 4.35 |
1495 | 1586 | 3.930229 | TCATTCCAAATTACTCGTCGTGG | 59.070 | 43.478 | 0.00 | 0.00 | 0.00 | 4.94 |
1496 | 1587 | 3.389925 | TTCCAAATTACTCGTCGTGGT | 57.610 | 42.857 | 0.00 | 0.00 | 0.00 | 4.16 |
1497 | 1588 | 3.389925 | TCCAAATTACTCGTCGTGGTT | 57.610 | 42.857 | 0.00 | 0.00 | 0.00 | 3.67 |
1498 | 1589 | 3.731089 | TCCAAATTACTCGTCGTGGTTT | 58.269 | 40.909 | 0.00 | 0.00 | 0.00 | 3.27 |
1499 | 1590 | 4.128643 | TCCAAATTACTCGTCGTGGTTTT | 58.871 | 39.130 | 0.00 | 0.00 | 0.00 | 2.43 |
1500 | 1591 | 5.295950 | TCCAAATTACTCGTCGTGGTTTTA | 58.704 | 37.500 | 0.00 | 0.00 | 0.00 | 1.52 |
1501 | 1592 | 5.406175 | TCCAAATTACTCGTCGTGGTTTTAG | 59.594 | 40.000 | 0.00 | 0.00 | 0.00 | 1.85 |
1502 | 1593 | 5.178067 | CCAAATTACTCGTCGTGGTTTTAGT | 59.822 | 40.000 | 0.00 | 0.00 | 0.00 | 2.24 |
1503 | 1594 | 6.293027 | CCAAATTACTCGTCGTGGTTTTAGTT | 60.293 | 38.462 | 0.00 | 0.00 | 0.00 | 2.24 |
1504 | 1595 | 6.457851 | AATTACTCGTCGTGGTTTTAGTTC | 57.542 | 37.500 | 0.00 | 0.00 | 0.00 | 3.01 |
1505 | 1596 | 3.441496 | ACTCGTCGTGGTTTTAGTTCA | 57.559 | 42.857 | 0.00 | 0.00 | 0.00 | 3.18 |
1506 | 1597 | 3.986277 | ACTCGTCGTGGTTTTAGTTCAT | 58.014 | 40.909 | 0.00 | 0.00 | 0.00 | 2.57 |
1507 | 1598 | 3.739300 | ACTCGTCGTGGTTTTAGTTCATG | 59.261 | 43.478 | 0.00 | 0.00 | 0.00 | 3.07 |
1508 | 1599 | 3.979948 | TCGTCGTGGTTTTAGTTCATGA | 58.020 | 40.909 | 0.00 | 0.00 | 0.00 | 3.07 |
1509 | 1600 | 4.370049 | TCGTCGTGGTTTTAGTTCATGAA | 58.630 | 39.130 | 3.38 | 3.38 | 0.00 | 2.57 |
1510 | 1601 | 4.209703 | TCGTCGTGGTTTTAGTTCATGAAC | 59.790 | 41.667 | 27.69 | 27.69 | 41.45 | 3.18 |
1523 | 1614 | 4.451557 | GTTCATGAACTAAAACCACGACG | 58.548 | 43.478 | 27.66 | 0.00 | 38.25 | 5.12 |
1524 | 1615 | 3.979948 | TCATGAACTAAAACCACGACGA | 58.020 | 40.909 | 0.00 | 0.00 | 0.00 | 4.20 |
1525 | 1616 | 3.985279 | TCATGAACTAAAACCACGACGAG | 59.015 | 43.478 | 0.00 | 0.00 | 0.00 | 4.18 |
1526 | 1617 | 3.441496 | TGAACTAAAACCACGACGAGT | 57.559 | 42.857 | 0.00 | 0.00 | 0.00 | 4.18 |
1527 | 1618 | 4.566545 | TGAACTAAAACCACGACGAGTA | 57.433 | 40.909 | 0.00 | 0.00 | 0.00 | 2.59 |
1528 | 1619 | 4.930963 | TGAACTAAAACCACGACGAGTAA | 58.069 | 39.130 | 0.00 | 0.00 | 0.00 | 2.24 |
1529 | 1620 | 5.531634 | TGAACTAAAACCACGACGAGTAAT | 58.468 | 37.500 | 0.00 | 0.00 | 0.00 | 1.89 |
1530 | 1621 | 5.984926 | TGAACTAAAACCACGACGAGTAATT | 59.015 | 36.000 | 0.00 | 1.08 | 0.00 | 1.40 |
1531 | 1622 | 6.479660 | TGAACTAAAACCACGACGAGTAATTT | 59.520 | 34.615 | 0.00 | 0.34 | 0.00 | 1.82 |
1532 | 1623 | 6.219302 | ACTAAAACCACGACGAGTAATTTG | 57.781 | 37.500 | 0.00 | 2.39 | 0.00 | 2.32 |
1533 | 1624 | 5.754890 | ACTAAAACCACGACGAGTAATTTGT | 59.245 | 36.000 | 0.00 | 2.95 | 0.00 | 2.83 |
1534 | 1625 | 6.922957 | ACTAAAACCACGACGAGTAATTTGTA | 59.077 | 34.615 | 0.00 | 0.00 | 0.00 | 2.41 |
1535 | 1626 | 6.601741 | AAAACCACGACGAGTAATTTGTAA | 57.398 | 33.333 | 0.00 | 0.00 | 0.00 | 2.41 |
1536 | 1627 | 5.580911 | AACCACGACGAGTAATTTGTAAC | 57.419 | 39.130 | 0.00 | 0.00 | 0.00 | 2.50 |
1537 | 1628 | 3.670055 | ACCACGACGAGTAATTTGTAACG | 59.330 | 43.478 | 0.00 | 0.00 | 0.00 | 3.18 |
1538 | 1629 | 3.059834 | CCACGACGAGTAATTTGTAACGG | 59.940 | 47.826 | 0.00 | 0.00 | 0.00 | 4.44 |
1539 | 1630 | 3.913763 | CACGACGAGTAATTTGTAACGGA | 59.086 | 43.478 | 0.00 | 0.00 | 0.00 | 4.69 |
1540 | 1631 | 4.029861 | CACGACGAGTAATTTGTAACGGAG | 59.970 | 45.833 | 0.00 | 0.00 | 0.00 | 4.63 |
1541 | 1632 | 3.545078 | CGACGAGTAATTTGTAACGGAGG | 59.455 | 47.826 | 0.00 | 0.00 | 0.00 | 4.30 |
1542 | 1633 | 3.853475 | ACGAGTAATTTGTAACGGAGGG | 58.147 | 45.455 | 0.00 | 0.00 | 0.00 | 4.30 |
1543 | 1634 | 3.511146 | ACGAGTAATTTGTAACGGAGGGA | 59.489 | 43.478 | 0.00 | 0.00 | 0.00 | 4.20 |
1544 | 1635 | 4.110482 | CGAGTAATTTGTAACGGAGGGAG | 58.890 | 47.826 | 0.00 | 0.00 | 0.00 | 4.30 |
1545 | 1636 | 4.381292 | CGAGTAATTTGTAACGGAGGGAGT | 60.381 | 45.833 | 0.00 | 0.00 | 0.00 | 3.85 |
1546 | 1637 | 5.163622 | CGAGTAATTTGTAACGGAGGGAGTA | 60.164 | 44.000 | 0.00 | 0.00 | 0.00 | 2.59 |
1547 | 1638 | 5.970592 | AGTAATTTGTAACGGAGGGAGTAC | 58.029 | 41.667 | 0.00 | 0.00 | 0.00 | 2.73 |
1588 | 1679 | 5.410924 | GCAGGGGAAACTGAAATTAACATC | 58.589 | 41.667 | 0.00 | 0.00 | 40.97 | 3.06 |
1591 | 1682 | 5.185828 | AGGGGAAACTGAAATTAACATCTGC | 59.814 | 40.000 | 0.00 | 0.00 | 0.00 | 4.26 |
1688 | 1781 | 3.650950 | ATGGGCAAGCTCCACGGT | 61.651 | 61.111 | 4.72 | 0.00 | 37.08 | 4.83 |
1796 | 1889 | 1.279271 | CTAGGTGACTGGGGAAGGTTG | 59.721 | 57.143 | 0.00 | 0.00 | 43.88 | 3.77 |
1822 | 1921 | 6.069331 | ACACACACCTCTAACTTCTTCTCTA | 58.931 | 40.000 | 0.00 | 0.00 | 0.00 | 2.43 |
1841 | 2005 | 9.757227 | CTTCTCTATCTTTTAACTCCATGGTAG | 57.243 | 37.037 | 12.58 | 10.43 | 0.00 | 3.18 |
1842 | 2006 | 7.727181 | TCTCTATCTTTTAACTCCATGGTAGC | 58.273 | 38.462 | 12.58 | 0.00 | 0.00 | 3.58 |
1844 | 2008 | 7.272978 | TCTATCTTTTAACTCCATGGTAGCAC | 58.727 | 38.462 | 12.58 | 0.00 | 0.00 | 4.40 |
2069 | 2233 | 9.627123 | TGAACTGATAGGGTAAATATCCTTTTG | 57.373 | 33.333 | 0.00 | 0.00 | 38.02 | 2.44 |
2076 | 2240 | 7.803279 | AGGGTAAATATCCTTTTGAATCGAC | 57.197 | 36.000 | 0.00 | 0.00 | 31.07 | 4.20 |
2079 | 2243 | 7.067737 | GGGTAAATATCCTTTTGAATCGACCAA | 59.932 | 37.037 | 0.00 | 0.00 | 0.00 | 3.67 |
2080 | 2244 | 8.630037 | GGTAAATATCCTTTTGAATCGACCAAT | 58.370 | 33.333 | 3.33 | 0.00 | 0.00 | 3.16 |
2087 | 2251 | 6.478344 | TCCTTTTGAATCGACCAATTTGTTTG | 59.522 | 34.615 | 3.33 | 0.00 | 34.93 | 2.93 |
2097 | 2261 | 8.568732 | TCGACCAATTTGTTTGATTTTACTTC | 57.431 | 30.769 | 0.00 | 0.00 | 37.53 | 3.01 |
2098 | 2262 | 8.191446 | TCGACCAATTTGTTTGATTTTACTTCA | 58.809 | 29.630 | 0.00 | 0.00 | 37.53 | 3.02 |
2113 | 2277 | 7.518731 | TTTTACTTCATGTGAAAACAAGTGC | 57.481 | 32.000 | 4.45 | 0.00 | 32.34 | 4.40 |
2136 | 2300 | 4.423625 | AGTCTGTTTCAGTTACTTGGCT | 57.576 | 40.909 | 0.00 | 0.00 | 32.61 | 4.75 |
2141 | 2305 | 6.482308 | GTCTGTTTCAGTTACTTGGCTCTTAA | 59.518 | 38.462 | 0.00 | 0.00 | 32.61 | 1.85 |
2173 | 2337 | 6.430616 | CGGTTACCAATTGAAAAACCCTACTA | 59.569 | 38.462 | 21.12 | 0.00 | 36.98 | 1.82 |
2180 | 2344 | 9.366216 | CCAATTGAAAAACCCTACTAAAATAGC | 57.634 | 33.333 | 7.12 | 0.00 | 0.00 | 2.97 |
2182 | 2346 | 6.746745 | TGAAAAACCCTACTAAAATAGCCG | 57.253 | 37.500 | 0.00 | 0.00 | 0.00 | 5.52 |
2184 | 2348 | 7.393216 | TGAAAAACCCTACTAAAATAGCCGTA | 58.607 | 34.615 | 0.00 | 0.00 | 0.00 | 4.02 |
2210 | 2374 | 6.426980 | CTGACATTATGTTAGCTGAAGCAA | 57.573 | 37.500 | 4.23 | 0.00 | 45.16 | 3.91 |
2217 | 2381 | 7.872163 | TTATGTTAGCTGAAGCAAAATGTTG | 57.128 | 32.000 | 4.90 | 0.00 | 45.16 | 3.33 |
2222 | 2386 | 5.772825 | AGCTGAAGCAAAATGTTGACTAA | 57.227 | 34.783 | 0.00 | 0.00 | 45.16 | 2.24 |
2225 | 2389 | 6.208204 | AGCTGAAGCAAAATGTTGACTAAGAT | 59.792 | 34.615 | 0.00 | 0.00 | 45.16 | 2.40 |
2236 | 2402 | 3.895232 | TGACTAAGATTGGAGAGCACC | 57.105 | 47.619 | 0.00 | 0.00 | 0.00 | 5.01 |
2237 | 2403 | 3.173151 | TGACTAAGATTGGAGAGCACCA | 58.827 | 45.455 | 0.00 | 0.00 | 38.24 | 4.17 |
2257 | 2423 | 7.877097 | AGCACCAAATGAAAAACTGCAATAATA | 59.123 | 29.630 | 0.00 | 0.00 | 0.00 | 0.98 |
2326 | 2492 | 3.609853 | TGGCAGTTGGACATATGAAGAC | 58.390 | 45.455 | 10.38 | 2.76 | 0.00 | 3.01 |
2344 | 2510 | 1.434696 | CCAATCTTGGGCACGCATC | 59.565 | 57.895 | 0.73 | 0.00 | 44.70 | 3.91 |
2369 | 2535 | 3.244422 | TGACATTCTCCCTGTTGTGGTAC | 60.244 | 47.826 | 0.00 | 0.00 | 0.00 | 3.34 |
2447 | 2613 | 3.641436 | TGAACTAGCTTCCAGTGTCAAGA | 59.359 | 43.478 | 0.00 | 0.00 | 0.00 | 3.02 |
2491 | 2657 | 1.923148 | AGTGGGGAAGGTGAAATAGGG | 59.077 | 52.381 | 0.00 | 0.00 | 0.00 | 3.53 |
2512 | 2678 | 3.376546 | GGACTTCCTTCTGAATGACATGC | 59.623 | 47.826 | 0.00 | 0.00 | 31.06 | 4.06 |
2542 | 2708 | 2.362077 | CCTTGCCACAAACATATAGGCC | 59.638 | 50.000 | 0.00 | 0.00 | 44.60 | 5.19 |
2625 | 2875 | 9.905713 | AATGTCTTAATCCTCTGTATTTGCTTA | 57.094 | 29.630 | 0.00 | 0.00 | 0.00 | 3.09 |
2628 | 2878 | 9.771534 | GTCTTAATCCTCTGTATTTGCTTATCT | 57.228 | 33.333 | 0.00 | 0.00 | 0.00 | 1.98 |
2675 | 2926 | 6.560253 | TTCTGACCTTCTAATTTTGCAGAC | 57.440 | 37.500 | 0.00 | 0.00 | 31.60 | 3.51 |
2690 | 2941 | 6.422776 | TTTGCAGACGGAAAAGATCTATTC | 57.577 | 37.500 | 0.00 | 0.00 | 28.38 | 1.75 |
2693 | 2944 | 4.443598 | GCAGACGGAAAAGATCTATTCCCT | 60.444 | 45.833 | 0.00 | 0.00 | 41.71 | 4.20 |
2727 | 2978 | 3.314080 | CGGTAAAGTTCTTGAGGCAAACA | 59.686 | 43.478 | 0.00 | 0.00 | 0.00 | 2.83 |
2744 | 2995 | 1.444933 | ACAAGAGGTGGGACATTGGA | 58.555 | 50.000 | 0.00 | 0.00 | 44.52 | 3.53 |
2758 | 3009 | 5.714806 | GGGACATTGGAAAGGAAGTGATAAA | 59.285 | 40.000 | 0.00 | 0.00 | 0.00 | 1.40 |
2774 | 3025 | 8.691661 | AAGTGATAAATTGTGTTACCAAGACT | 57.308 | 30.769 | 0.00 | 0.00 | 0.00 | 3.24 |
2813 | 3064 | 1.043116 | TACATCCCGAGGTGAGCCAG | 61.043 | 60.000 | 0.00 | 0.00 | 37.19 | 4.85 |
2823 | 3074 | 3.130516 | CGAGGTGAGCCAGACTATAAACA | 59.869 | 47.826 | 0.00 | 0.00 | 37.19 | 2.83 |
2827 | 3078 | 3.933332 | GTGAGCCAGACTATAAACACACC | 59.067 | 47.826 | 0.00 | 0.00 | 0.00 | 4.16 |
2828 | 3079 | 3.580895 | TGAGCCAGACTATAAACACACCA | 59.419 | 43.478 | 0.00 | 0.00 | 0.00 | 4.17 |
2831 | 3082 | 4.019321 | AGCCAGACTATAAACACACCATGT | 60.019 | 41.667 | 0.00 | 0.00 | 46.42 | 3.21 |
2832 | 3083 | 5.188948 | AGCCAGACTATAAACACACCATGTA | 59.811 | 40.000 | 0.00 | 0.00 | 42.31 | 2.29 |
2848 | 3099 | 6.183361 | ACACCATGTATCTACCATAATGCCTT | 60.183 | 38.462 | 0.00 | 0.00 | 0.00 | 4.35 |
2849 | 3100 | 6.716628 | CACCATGTATCTACCATAATGCCTTT | 59.283 | 38.462 | 0.00 | 0.00 | 0.00 | 3.11 |
2879 | 3130 | 1.958205 | CTGCCGATTCCGCCATCTC | 60.958 | 63.158 | 0.00 | 0.00 | 0.00 | 2.75 |
2881 | 3132 | 1.112916 | TGCCGATTCCGCCATCTCTA | 61.113 | 55.000 | 0.00 | 0.00 | 0.00 | 2.43 |
2947 | 3198 | 6.856895 | AGTTGCATCAGGAATAAAGTTAAGC | 58.143 | 36.000 | 0.00 | 0.00 | 0.00 | 3.09 |
2977 | 3228 | 9.719355 | AGTTTAAAAAGTTGAAGAAATGGTGTT | 57.281 | 25.926 | 0.00 | 0.00 | 0.00 | 3.32 |
2978 | 3229 | 9.753669 | GTTTAAAAAGTTGAAGAAATGGTGTTG | 57.246 | 29.630 | 0.00 | 0.00 | 0.00 | 3.33 |
2979 | 3230 | 9.712305 | TTTAAAAAGTTGAAGAAATGGTGTTGA | 57.288 | 25.926 | 0.00 | 0.00 | 0.00 | 3.18 |
2980 | 3231 | 7.832503 | AAAAAGTTGAAGAAATGGTGTTGAG | 57.167 | 32.000 | 0.00 | 0.00 | 0.00 | 3.02 |
2981 | 3232 | 4.574599 | AGTTGAAGAAATGGTGTTGAGC | 57.425 | 40.909 | 0.00 | 0.00 | 0.00 | 4.26 |
2982 | 3233 | 4.210331 | AGTTGAAGAAATGGTGTTGAGCT | 58.790 | 39.130 | 0.00 | 0.00 | 0.00 | 4.09 |
2983 | 3234 | 4.276926 | AGTTGAAGAAATGGTGTTGAGCTC | 59.723 | 41.667 | 6.82 | 6.82 | 0.00 | 4.09 |
2984 | 3235 | 3.819368 | TGAAGAAATGGTGTTGAGCTCA | 58.181 | 40.909 | 13.74 | 13.74 | 0.00 | 4.26 |
2985 | 3236 | 3.817084 | TGAAGAAATGGTGTTGAGCTCAG | 59.183 | 43.478 | 17.43 | 0.00 | 0.00 | 3.35 |
2986 | 3237 | 2.787994 | AGAAATGGTGTTGAGCTCAGG | 58.212 | 47.619 | 17.43 | 0.00 | 0.00 | 3.86 |
2987 | 3238 | 2.373169 | AGAAATGGTGTTGAGCTCAGGA | 59.627 | 45.455 | 17.43 | 4.50 | 0.00 | 3.86 |
2988 | 3239 | 2.957402 | AATGGTGTTGAGCTCAGGAA | 57.043 | 45.000 | 17.43 | 3.69 | 0.00 | 3.36 |
2989 | 3240 | 3.446442 | AATGGTGTTGAGCTCAGGAAT | 57.554 | 42.857 | 17.43 | 5.19 | 0.00 | 3.01 |
2990 | 3241 | 2.189594 | TGGTGTTGAGCTCAGGAATG | 57.810 | 50.000 | 17.43 | 0.00 | 0.00 | 2.67 |
2991 | 3242 | 1.699083 | TGGTGTTGAGCTCAGGAATGA | 59.301 | 47.619 | 17.43 | 0.00 | 0.00 | 2.57 |
2992 | 3243 | 2.106338 | TGGTGTTGAGCTCAGGAATGAA | 59.894 | 45.455 | 17.43 | 0.00 | 0.00 | 2.57 |
2993 | 3244 | 3.245016 | TGGTGTTGAGCTCAGGAATGAAT | 60.245 | 43.478 | 17.43 | 0.00 | 0.00 | 2.57 |
2994 | 3245 | 3.760684 | GGTGTTGAGCTCAGGAATGAATT | 59.239 | 43.478 | 17.43 | 0.00 | 0.00 | 2.17 |
2995 | 3246 | 4.219288 | GGTGTTGAGCTCAGGAATGAATTT | 59.781 | 41.667 | 17.43 | 0.00 | 0.00 | 1.82 |
2996 | 3247 | 5.397326 | GTGTTGAGCTCAGGAATGAATTTC | 58.603 | 41.667 | 17.43 | 0.00 | 0.00 | 2.17 |
2997 | 3248 | 5.182760 | GTGTTGAGCTCAGGAATGAATTTCT | 59.817 | 40.000 | 17.43 | 0.00 | 34.56 | 2.52 |
2998 | 3249 | 5.771666 | TGTTGAGCTCAGGAATGAATTTCTT | 59.228 | 36.000 | 17.43 | 0.00 | 34.56 | 2.52 |
2999 | 3250 | 6.072286 | TGTTGAGCTCAGGAATGAATTTCTTC | 60.072 | 38.462 | 17.43 | 0.09 | 34.56 | 2.87 |
3000 | 3251 | 5.563592 | TGAGCTCAGGAATGAATTTCTTCA | 58.436 | 37.500 | 13.74 | 0.00 | 45.15 | 3.02 |
3001 | 3252 | 5.646793 | TGAGCTCAGGAATGAATTTCTTCAG | 59.353 | 40.000 | 13.74 | 0.00 | 44.32 | 3.02 |
3002 | 3253 | 5.813383 | AGCTCAGGAATGAATTTCTTCAGA | 58.187 | 37.500 | 0.00 | 2.10 | 44.32 | 3.27 |
3003 | 3254 | 6.424883 | AGCTCAGGAATGAATTTCTTCAGAT | 58.575 | 36.000 | 0.00 | 0.00 | 44.32 | 2.90 |
3004 | 3255 | 6.543100 | AGCTCAGGAATGAATTTCTTCAGATC | 59.457 | 38.462 | 0.00 | 0.00 | 44.32 | 2.75 |
3005 | 3256 | 6.238703 | GCTCAGGAATGAATTTCTTCAGATCC | 60.239 | 42.308 | 11.91 | 11.91 | 44.32 | 3.36 |
3009 | 3260 | 7.261829 | GGAATGAATTTCTTCAGATCCTGAG | 57.738 | 40.000 | 12.31 | 0.00 | 44.32 | 3.35 |
3010 | 3261 | 7.052873 | GGAATGAATTTCTTCAGATCCTGAGA | 58.947 | 38.462 | 12.31 | 0.00 | 44.32 | 3.27 |
3011 | 3262 | 7.012232 | GGAATGAATTTCTTCAGATCCTGAGAC | 59.988 | 40.741 | 12.31 | 0.00 | 44.32 | 3.36 |
3012 | 3263 | 6.364568 | TGAATTTCTTCAGATCCTGAGACA | 57.635 | 37.500 | 0.00 | 0.00 | 41.75 | 3.41 |
3013 | 3264 | 6.772605 | TGAATTTCTTCAGATCCTGAGACAA | 58.227 | 36.000 | 0.00 | 0.00 | 41.75 | 3.18 |
3014 | 3265 | 7.226441 | TGAATTTCTTCAGATCCTGAGACAAA | 58.774 | 34.615 | 0.00 | 0.00 | 41.75 | 2.83 |
3015 | 3266 | 7.389884 | TGAATTTCTTCAGATCCTGAGACAAAG | 59.610 | 37.037 | 0.00 | 0.00 | 41.75 | 2.77 |
3016 | 3267 | 4.815533 | TCTTCAGATCCTGAGACAAAGG | 57.184 | 45.455 | 0.00 | 0.00 | 41.75 | 3.11 |
3023 | 3274 | 3.943671 | TCCTGAGACAAAGGTCCAAAA | 57.056 | 42.857 | 0.00 | 0.00 | 45.48 | 2.44 |
3304 | 3555 | 8.923270 | TCAAATATGTGAAAAGGGAAAGAAAGT | 58.077 | 29.630 | 0.00 | 0.00 | 0.00 | 2.66 |
3348 | 3599 | 5.907197 | TTTTCGACACAAAAGTTGCAAAA | 57.093 | 30.435 | 0.00 | 0.00 | 0.00 | 2.44 |
3383 | 3634 | 8.641498 | AAATGTAGATGATTTTGTCCTCTGTT | 57.359 | 30.769 | 0.00 | 0.00 | 34.26 | 3.16 |
3416 | 3668 | 5.717119 | TCCGAATGACCTAAAGTTCAGTAC | 58.283 | 41.667 | 0.00 | 0.00 | 0.00 | 2.73 |
3441 | 3693 | 2.567615 | ACGTGCTGAAAGATACTCCCTT | 59.432 | 45.455 | 0.00 | 0.00 | 34.07 | 3.95 |
3459 | 3711 | 3.190535 | CCCTTCGTCCCAAAATAAGTGTG | 59.809 | 47.826 | 0.00 | 0.00 | 0.00 | 3.82 |
3469 | 3721 | 4.278170 | CCAAAATAAGTGTGGCTGACTTGA | 59.722 | 41.667 | 10.74 | 0.00 | 35.30 | 3.02 |
3477 | 3729 | 3.433615 | GTGTGGCTGACTTGATACAACTC | 59.566 | 47.826 | 0.00 | 0.00 | 0.00 | 3.01 |
3495 | 3747 | 3.751518 | ACTCTGGGTGGTTCACAAATAC | 58.248 | 45.455 | 0.38 | 0.00 | 35.86 | 1.89 |
3527 | 3779 | 5.174395 | AGCATAACATCACTTGACTCAGAC | 58.826 | 41.667 | 0.00 | 0.00 | 0.00 | 3.51 |
3529 | 3781 | 6.153510 | AGCATAACATCACTTGACTCAGACTA | 59.846 | 38.462 | 0.00 | 0.00 | 0.00 | 2.59 |
3611 | 3863 | 9.355215 | CATAACATTTATATCCCACGTAGAGTC | 57.645 | 37.037 | 0.00 | 0.00 | 0.00 | 3.36 |
3706 | 3958 | 2.651382 | AATACTTTACCCGGATGCCC | 57.349 | 50.000 | 0.73 | 0.00 | 0.00 | 5.36 |
3782 | 4064 | 1.203052 | CTTGCCTCAAATGCGGTCAAT | 59.797 | 47.619 | 0.00 | 0.00 | 0.00 | 2.57 |
3857 | 4139 | 5.560724 | ACATTGCTCAGGTACATGTTAACT | 58.439 | 37.500 | 2.30 | 0.00 | 0.00 | 2.24 |
3926 | 4208 | 6.929049 | TCATGACTAACAACTAGACAACTTGG | 59.071 | 38.462 | 0.00 | 0.00 | 36.18 | 3.61 |
3944 | 4226 | 8.573035 | ACAACTTGGTACATTTCGAAATACAAT | 58.427 | 29.630 | 22.33 | 11.21 | 39.30 | 2.71 |
3950 | 4232 | 9.566530 | TGGTACATTTCGAAATACAATCATTTG | 57.433 | 29.630 | 22.33 | 10.62 | 38.86 | 2.32 |
3978 | 4260 | 4.265073 | ACAATAGCTTCCTCCACAATCAC | 58.735 | 43.478 | 0.00 | 0.00 | 0.00 | 3.06 |
4039 | 4321 | 8.919777 | ATTATGGCCATTAGTAAAACTACTCC | 57.080 | 34.615 | 26.37 | 0.00 | 28.93 | 3.85 |
4040 | 4322 | 5.106876 | TGGCCATTAGTAAAACTACTCCC | 57.893 | 43.478 | 0.00 | 0.00 | 28.93 | 4.30 |
4041 | 4323 | 4.786454 | TGGCCATTAGTAAAACTACTCCCT | 59.214 | 41.667 | 0.00 | 0.00 | 28.93 | 4.20 |
4042 | 4324 | 5.104652 | TGGCCATTAGTAAAACTACTCCCTC | 60.105 | 44.000 | 0.00 | 0.00 | 28.93 | 4.30 |
4043 | 4325 | 5.366460 | GCCATTAGTAAAACTACTCCCTCC | 58.634 | 45.833 | 0.00 | 0.00 | 28.93 | 4.30 |
4044 | 4326 | 5.598769 | CCATTAGTAAAACTACTCCCTCCG | 58.401 | 45.833 | 0.00 | 0.00 | 28.93 | 4.63 |
4045 | 4327 | 5.128335 | CCATTAGTAAAACTACTCCCTCCGT | 59.872 | 44.000 | 0.00 | 0.00 | 28.93 | 4.69 |
4046 | 4328 | 5.904362 | TTAGTAAAACTACTCCCTCCGTC | 57.096 | 43.478 | 0.00 | 0.00 | 28.93 | 4.79 |
4047 | 4329 | 3.095332 | AGTAAAACTACTCCCTCCGTCC | 58.905 | 50.000 | 0.00 | 0.00 | 0.00 | 4.79 |
4048 | 4330 | 1.273759 | AAAACTACTCCCTCCGTCCC | 58.726 | 55.000 | 0.00 | 0.00 | 0.00 | 4.46 |
4049 | 4331 | 0.115745 | AAACTACTCCCTCCGTCCCA | 59.884 | 55.000 | 0.00 | 0.00 | 0.00 | 4.37 |
4050 | 4332 | 0.338814 | AACTACTCCCTCCGTCCCAT | 59.661 | 55.000 | 0.00 | 0.00 | 0.00 | 4.00 |
4051 | 4333 | 1.229131 | ACTACTCCCTCCGTCCCATA | 58.771 | 55.000 | 0.00 | 0.00 | 0.00 | 2.74 |
4052 | 4334 | 1.572415 | ACTACTCCCTCCGTCCCATAA | 59.428 | 52.381 | 0.00 | 0.00 | 0.00 | 1.90 |
4053 | 4335 | 2.179424 | ACTACTCCCTCCGTCCCATAAT | 59.821 | 50.000 | 0.00 | 0.00 | 0.00 | 1.28 |
4054 | 4336 | 1.424638 | ACTCCCTCCGTCCCATAATG | 58.575 | 55.000 | 0.00 | 0.00 | 0.00 | 1.90 |
4055 | 4337 | 1.344087 | ACTCCCTCCGTCCCATAATGT | 60.344 | 52.381 | 0.00 | 0.00 | 0.00 | 2.71 |
4056 | 4338 | 2.090943 | ACTCCCTCCGTCCCATAATGTA | 60.091 | 50.000 | 0.00 | 0.00 | 0.00 | 2.29 |
4057 | 4339 | 2.969950 | CTCCCTCCGTCCCATAATGTAA | 59.030 | 50.000 | 0.00 | 0.00 | 0.00 | 2.41 |
4058 | 4340 | 2.969950 | TCCCTCCGTCCCATAATGTAAG | 59.030 | 50.000 | 0.00 | 0.00 | 0.00 | 2.34 |
4059 | 4341 | 2.969950 | CCCTCCGTCCCATAATGTAAGA | 59.030 | 50.000 | 0.00 | 0.00 | 0.00 | 2.10 |
4060 | 4342 | 3.244112 | CCCTCCGTCCCATAATGTAAGAC | 60.244 | 52.174 | 0.00 | 0.00 | 0.00 | 3.01 |
4062 | 4344 | 3.025978 | TCCGTCCCATAATGTAAGACGT | 58.974 | 45.455 | 9.63 | 0.00 | 46.62 | 4.34 |
4063 | 4345 | 3.448301 | TCCGTCCCATAATGTAAGACGTT | 59.552 | 43.478 | 9.63 | 0.00 | 46.62 | 3.99 |
4064 | 4346 | 4.081531 | TCCGTCCCATAATGTAAGACGTTT | 60.082 | 41.667 | 9.63 | 0.00 | 46.62 | 3.60 |
4065 | 4347 | 4.632688 | CCGTCCCATAATGTAAGACGTTTT | 59.367 | 41.667 | 9.63 | 0.00 | 46.62 | 2.43 |
4066 | 4348 | 5.122711 | CCGTCCCATAATGTAAGACGTTTTT | 59.877 | 40.000 | 9.63 | 0.00 | 46.62 | 1.94 |
4088 | 4370 | 7.915293 | TTTTGACACTACACTACATTATGGG | 57.085 | 36.000 | 0.00 | 0.00 | 0.00 | 4.00 |
4089 | 4371 | 6.860790 | TTGACACTACACTACATTATGGGA | 57.139 | 37.500 | 0.00 | 0.00 | 0.00 | 4.37 |
4090 | 4372 | 6.216801 | TGACACTACACTACATTATGGGAC | 57.783 | 41.667 | 0.00 | 0.00 | 0.00 | 4.46 |
4091 | 4373 | 5.163591 | TGACACTACACTACATTATGGGACG | 60.164 | 44.000 | 0.00 | 0.00 | 0.00 | 4.79 |
4092 | 4374 | 4.098960 | ACACTACACTACATTATGGGACGG | 59.901 | 45.833 | 0.00 | 0.00 | 0.00 | 4.79 |
4093 | 4375 | 4.340097 | CACTACACTACATTATGGGACGGA | 59.660 | 45.833 | 0.00 | 0.00 | 0.00 | 4.69 |
4094 | 4376 | 4.583489 | ACTACACTACATTATGGGACGGAG | 59.417 | 45.833 | 0.00 | 0.00 | 0.00 | 4.63 |
4095 | 4377 | 2.698797 | ACACTACATTATGGGACGGAGG | 59.301 | 50.000 | 0.00 | 0.00 | 0.00 | 4.30 |
4096 | 4378 | 2.037251 | CACTACATTATGGGACGGAGGG | 59.963 | 54.545 | 0.00 | 0.00 | 0.00 | 4.30 |
4097 | 4379 | 2.090943 | ACTACATTATGGGACGGAGGGA | 60.091 | 50.000 | 0.00 | 0.00 | 0.00 | 4.20 |
4098 | 4380 | 1.424638 | ACATTATGGGACGGAGGGAG | 58.575 | 55.000 | 0.00 | 0.00 | 0.00 | 4.30 |
4099 | 4381 | 1.344087 | ACATTATGGGACGGAGGGAGT | 60.344 | 52.381 | 0.00 | 0.00 | 0.00 | 3.85 |
4100 | 4382 | 2.090943 | ACATTATGGGACGGAGGGAGTA | 60.091 | 50.000 | 0.00 | 0.00 | 0.00 | 2.59 |
4101 | 4383 | 2.376695 | TTATGGGACGGAGGGAGTAG | 57.623 | 55.000 | 0.00 | 0.00 | 0.00 | 2.57 |
4102 | 4384 | 1.526315 | TATGGGACGGAGGGAGTAGA | 58.474 | 55.000 | 0.00 | 0.00 | 0.00 | 2.59 |
4103 | 4385 | 0.635009 | ATGGGACGGAGGGAGTAGAA | 59.365 | 55.000 | 0.00 | 0.00 | 0.00 | 2.10 |
4104 | 4386 | 0.635009 | TGGGACGGAGGGAGTAGAAT | 59.365 | 55.000 | 0.00 | 0.00 | 0.00 | 2.40 |
4105 | 4387 | 1.007963 | TGGGACGGAGGGAGTAGAATT | 59.992 | 52.381 | 0.00 | 0.00 | 0.00 | 2.17 |
4106 | 4388 | 2.117051 | GGGACGGAGGGAGTAGAATTT | 58.883 | 52.381 | 0.00 | 0.00 | 0.00 | 1.82 |
4107 | 4389 | 2.504585 | GGGACGGAGGGAGTAGAATTTT | 59.495 | 50.000 | 0.00 | 0.00 | 0.00 | 1.82 |
4108 | 4390 | 3.708121 | GGGACGGAGGGAGTAGAATTTTA | 59.292 | 47.826 | 0.00 | 0.00 | 0.00 | 1.52 |
4109 | 4391 | 4.162888 | GGGACGGAGGGAGTAGAATTTTAA | 59.837 | 45.833 | 0.00 | 0.00 | 0.00 | 1.52 |
4110 | 4392 | 5.163227 | GGGACGGAGGGAGTAGAATTTTAAT | 60.163 | 44.000 | 0.00 | 0.00 | 0.00 | 1.40 |
4111 | 4393 | 6.042437 | GGGACGGAGGGAGTAGAATTTTAATA | 59.958 | 42.308 | 0.00 | 0.00 | 0.00 | 0.98 |
4112 | 4394 | 7.419403 | GGGACGGAGGGAGTAGAATTTTAATAA | 60.419 | 40.741 | 0.00 | 0.00 | 0.00 | 1.40 |
4113 | 4395 | 7.989170 | GGACGGAGGGAGTAGAATTTTAATAAA | 59.011 | 37.037 | 0.00 | 0.00 | 0.00 | 1.40 |
4114 | 4396 | 9.387257 | GACGGAGGGAGTAGAATTTTAATAAAA | 57.613 | 33.333 | 0.25 | 0.25 | 34.41 | 1.52 |
4115 | 4397 | 9.392259 | ACGGAGGGAGTAGAATTTTAATAAAAG | 57.608 | 33.333 | 4.43 | 0.00 | 33.22 | 2.27 |
4116 | 4398 | 8.837389 | CGGAGGGAGTAGAATTTTAATAAAAGG | 58.163 | 37.037 | 4.43 | 0.00 | 33.22 | 3.11 |
4117 | 4399 | 9.132923 | GGAGGGAGTAGAATTTTAATAAAAGGG | 57.867 | 37.037 | 4.43 | 0.00 | 33.22 | 3.95 |
4118 | 4400 | 9.132923 | GAGGGAGTAGAATTTTAATAAAAGGGG | 57.867 | 37.037 | 4.43 | 0.00 | 33.22 | 4.79 |
4119 | 4401 | 8.065627 | AGGGAGTAGAATTTTAATAAAAGGGGG | 58.934 | 37.037 | 4.43 | 0.00 | 33.22 | 5.40 |
4120 | 4402 | 8.063153 | GGGAGTAGAATTTTAATAAAAGGGGGA | 58.937 | 37.037 | 4.43 | 0.00 | 33.22 | 4.81 |
4121 | 4403 | 9.483489 | GGAGTAGAATTTTAATAAAAGGGGGAA | 57.517 | 33.333 | 4.43 | 0.00 | 33.22 | 3.97 |
4141 | 4423 | 2.531522 | AAAACTAAGGTACACCGCGT | 57.468 | 45.000 | 4.92 | 0.00 | 42.08 | 6.01 |
4142 | 4424 | 2.531522 | AAACTAAGGTACACCGCGTT | 57.468 | 45.000 | 4.92 | 0.00 | 42.08 | 4.84 |
4143 | 4425 | 2.531522 | AACTAAGGTACACCGCGTTT | 57.468 | 45.000 | 4.92 | 0.00 | 42.08 | 3.60 |
4144 | 4426 | 3.658757 | AACTAAGGTACACCGCGTTTA | 57.341 | 42.857 | 4.92 | 0.00 | 42.08 | 2.01 |
4145 | 4427 | 3.874392 | ACTAAGGTACACCGCGTTTAT | 57.126 | 42.857 | 4.92 | 0.00 | 42.08 | 1.40 |
4146 | 4428 | 3.514645 | ACTAAGGTACACCGCGTTTATG | 58.485 | 45.455 | 4.92 | 0.00 | 42.08 | 1.90 |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
11 | 12 | 4.368808 | CAGTTCACCGGCGTTGCG | 62.369 | 66.667 | 6.01 | 0.00 | 0.00 | 4.85 |
21 | 22 | 0.179018 | ACACCTCCTTGCCAGTTCAC | 60.179 | 55.000 | 0.00 | 0.00 | 0.00 | 3.18 |
38 | 39 | 1.521906 | CCACCGACGAACAACCACA | 60.522 | 57.895 | 0.00 | 0.00 | 0.00 | 4.17 |
71 | 72 | 1.342076 | ACTAACCTCTCCCGCTCATGA | 60.342 | 52.381 | 0.00 | 0.00 | 0.00 | 3.07 |
74 | 75 | 0.251653 | ACACTAACCTCTCCCGCTCA | 60.252 | 55.000 | 0.00 | 0.00 | 0.00 | 4.26 |
115 | 116 | 4.062991 | CCATCTAGTTTGGGCGGTTATAC | 58.937 | 47.826 | 6.59 | 0.00 | 0.00 | 1.47 |
129 | 130 | 1.065418 | CCTTTCGTTGGCCCATCTAGT | 60.065 | 52.381 | 0.00 | 0.00 | 0.00 | 2.57 |
132 | 133 | 1.678970 | GCCTTTCGTTGGCCCATCT | 60.679 | 57.895 | 0.00 | 0.00 | 44.32 | 2.90 |
141 | 142 | 1.515521 | CCTTTCGGCAGCCTTTCGTT | 61.516 | 55.000 | 10.54 | 0.00 | 0.00 | 3.85 |
142 | 143 | 1.966451 | CCTTTCGGCAGCCTTTCGT | 60.966 | 57.895 | 10.54 | 0.00 | 0.00 | 3.85 |
153 | 154 | 2.435693 | ATCCTCCTCGGCCTTTCGG | 61.436 | 63.158 | 0.00 | 0.00 | 0.00 | 4.30 |
154 | 155 | 1.227380 | CATCCTCCTCGGCCTTTCG | 60.227 | 63.158 | 0.00 | 0.00 | 0.00 | 3.46 |
155 | 156 | 1.147153 | CCATCCTCCTCGGCCTTTC | 59.853 | 63.158 | 0.00 | 0.00 | 0.00 | 2.62 |
156 | 157 | 1.306997 | TCCATCCTCCTCGGCCTTT | 60.307 | 57.895 | 0.00 | 0.00 | 0.00 | 3.11 |
157 | 158 | 1.764054 | CTCCATCCTCCTCGGCCTT | 60.764 | 63.158 | 0.00 | 0.00 | 0.00 | 4.35 |
158 | 159 | 2.029892 | ATCTCCATCCTCCTCGGCCT | 62.030 | 60.000 | 0.00 | 0.00 | 0.00 | 5.19 |
159 | 160 | 0.251832 | TATCTCCATCCTCCTCGGCC | 60.252 | 60.000 | 0.00 | 0.00 | 0.00 | 6.13 |
160 | 161 | 1.548269 | CTTATCTCCATCCTCCTCGGC | 59.452 | 57.143 | 0.00 | 0.00 | 0.00 | 5.54 |
161 | 162 | 2.823154 | GACTTATCTCCATCCTCCTCGG | 59.177 | 54.545 | 0.00 | 0.00 | 0.00 | 4.63 |
171 | 172 | 2.050144 | GCCTCATGGGACTTATCTCCA | 58.950 | 52.381 | 0.00 | 0.00 | 37.23 | 3.86 |
206 | 207 | 3.384467 | CACACCAAGGACTCACCATTTTT | 59.616 | 43.478 | 0.00 | 0.00 | 42.04 | 1.94 |
222 | 223 | 1.074090 | TGGGGTCTCTTCCACACCA | 60.074 | 57.895 | 0.00 | 0.00 | 45.61 | 4.17 |
236 | 237 | 1.856629 | ATCCTTTGAGCAACATGGGG | 58.143 | 50.000 | 0.00 | 0.00 | 0.00 | 4.96 |
275 | 276 | 2.028203 | CCCAAACCATAGCCCAGTTTTG | 60.028 | 50.000 | 0.00 | 0.00 | 31.54 | 2.44 |
282 | 283 | 0.614697 | AGCAACCCAAACCATAGCCC | 60.615 | 55.000 | 0.00 | 0.00 | 0.00 | 5.19 |
307 | 308 | 4.733371 | TCCGCGCGCATCAGACAA | 62.733 | 61.111 | 32.61 | 3.16 | 0.00 | 3.18 |
344 | 380 | 3.680937 | CGCTAATTGAACGGAAACACCTA | 59.319 | 43.478 | 0.00 | 0.00 | 36.31 | 3.08 |
545 | 582 | 3.447229 | AGTTTGCTGCCAAAAGTTACAGT | 59.553 | 39.130 | 0.00 | 0.00 | 42.19 | 3.55 |
656 | 693 | 9.710818 | TCCCTCTGTAAACTAATATAAGAGTGT | 57.289 | 33.333 | 0.00 | 0.00 | 0.00 | 3.55 |
658 | 695 | 9.939424 | ACTCCCTCTGTAAACTAATATAAGAGT | 57.061 | 33.333 | 0.00 | 0.00 | 0.00 | 3.24 |
666 | 703 | 9.939424 | AATCTAGTACTCCCTCTGTAAACTAAT | 57.061 | 33.333 | 0.00 | 0.00 | 0.00 | 1.73 |
668 | 705 | 9.844257 | GTAATCTAGTACTCCCTCTGTAAACTA | 57.156 | 37.037 | 0.00 | 0.00 | 0.00 | 2.24 |
669 | 706 | 8.559175 | AGTAATCTAGTACTCCCTCTGTAAACT | 58.441 | 37.037 | 0.00 | 0.00 | 27.56 | 2.66 |
670 | 707 | 8.750515 | AGTAATCTAGTACTCCCTCTGTAAAC | 57.249 | 38.462 | 0.00 | 0.00 | 27.56 | 2.01 |
672 | 709 | 9.444668 | TCTAGTAATCTAGTACTCCCTCTGTAA | 57.555 | 37.037 | 0.00 | 0.00 | 42.88 | 2.41 |
673 | 710 | 9.092338 | CTCTAGTAATCTAGTACTCCCTCTGTA | 57.908 | 40.741 | 0.00 | 0.00 | 42.88 | 2.74 |
674 | 711 | 7.016858 | CCTCTAGTAATCTAGTACTCCCTCTGT | 59.983 | 44.444 | 0.00 | 0.00 | 42.88 | 3.41 |
675 | 712 | 7.391620 | CCTCTAGTAATCTAGTACTCCCTCTG | 58.608 | 46.154 | 0.00 | 0.00 | 42.88 | 3.35 |
676 | 713 | 6.013119 | GCCTCTAGTAATCTAGTACTCCCTCT | 60.013 | 46.154 | 0.00 | 0.00 | 42.88 | 3.69 |
677 | 714 | 6.175471 | GCCTCTAGTAATCTAGTACTCCCTC | 58.825 | 48.000 | 0.00 | 0.00 | 42.88 | 4.30 |
678 | 715 | 5.280113 | CGCCTCTAGTAATCTAGTACTCCCT | 60.280 | 48.000 | 0.00 | 0.00 | 42.88 | 4.20 |
679 | 716 | 4.937015 | CGCCTCTAGTAATCTAGTACTCCC | 59.063 | 50.000 | 0.00 | 0.00 | 42.88 | 4.30 |
680 | 717 | 5.409214 | CACGCCTCTAGTAATCTAGTACTCC | 59.591 | 48.000 | 0.00 | 0.00 | 42.88 | 3.85 |
681 | 718 | 5.990996 | ACACGCCTCTAGTAATCTAGTACTC | 59.009 | 44.000 | 0.00 | 0.00 | 42.88 | 2.59 |
682 | 719 | 5.927819 | ACACGCCTCTAGTAATCTAGTACT | 58.072 | 41.667 | 0.00 | 0.00 | 42.88 | 2.73 |
683 | 720 | 5.179182 | GGACACGCCTCTAGTAATCTAGTAC | 59.821 | 48.000 | 2.84 | 0.00 | 42.88 | 2.73 |
684 | 721 | 5.303971 | GGACACGCCTCTAGTAATCTAGTA | 58.696 | 45.833 | 2.84 | 0.00 | 42.88 | 1.82 |
685 | 722 | 4.136051 | GGACACGCCTCTAGTAATCTAGT | 58.864 | 47.826 | 2.84 | 0.00 | 42.88 | 2.57 |
686 | 723 | 3.502979 | GGGACACGCCTCTAGTAATCTAG | 59.497 | 52.174 | 0.00 | 0.00 | 43.48 | 2.43 |
758 | 799 | 1.293179 | GAAATTGCAAGGGCGGCTT | 59.707 | 52.632 | 9.56 | 0.00 | 45.35 | 4.35 |
967 | 1014 | 2.675371 | GGTTGGCTACCCCAGACC | 59.325 | 66.667 | 6.88 | 0.00 | 46.39 | 3.85 |
975 | 1022 | 0.253327 | CTCCCTCCTTGGTTGGCTAC | 59.747 | 60.000 | 0.00 | 0.00 | 0.00 | 3.58 |
976 | 1023 | 0.914417 | CCTCCCTCCTTGGTTGGCTA | 60.914 | 60.000 | 0.00 | 0.00 | 0.00 | 3.93 |
977 | 1024 | 2.234296 | CCTCCCTCCTTGGTTGGCT | 61.234 | 63.158 | 0.00 | 0.00 | 0.00 | 4.75 |
1006 | 1053 | 4.401519 | CCATATGTCCCTAGTGGTATACCG | 59.598 | 50.000 | 17.13 | 2.59 | 39.43 | 4.02 |
1062 | 1109 | 4.717629 | CCGAGGACGACGCTGCAA | 62.718 | 66.667 | 0.00 | 0.00 | 42.66 | 4.08 |
1220 | 1267 | 2.534011 | TTGGATGCCAGGTGGGGA | 60.534 | 61.111 | 0.00 | 0.00 | 43.39 | 4.81 |
1284 | 1375 | 5.598005 | TCCTCTGAAGAATTTCAAGCCAAAA | 59.402 | 36.000 | 0.00 | 0.00 | 42.48 | 2.44 |
1468 | 1559 | 5.174037 | ACGAGTAATTTGGAATGAAGGGA | 57.826 | 39.130 | 0.00 | 0.00 | 0.00 | 4.20 |
1469 | 1560 | 4.034048 | CGACGAGTAATTTGGAATGAAGGG | 59.966 | 45.833 | 0.00 | 0.00 | 0.00 | 3.95 |
1470 | 1561 | 4.630069 | ACGACGAGTAATTTGGAATGAAGG | 59.370 | 41.667 | 0.00 | 0.00 | 0.00 | 3.46 |
1471 | 1562 | 5.445939 | CCACGACGAGTAATTTGGAATGAAG | 60.446 | 44.000 | 0.00 | 0.00 | 0.00 | 3.02 |
1472 | 1563 | 4.390603 | CCACGACGAGTAATTTGGAATGAA | 59.609 | 41.667 | 0.00 | 0.00 | 0.00 | 2.57 |
1473 | 1564 | 3.930229 | CCACGACGAGTAATTTGGAATGA | 59.070 | 43.478 | 0.00 | 0.00 | 0.00 | 2.57 |
1474 | 1565 | 3.682858 | ACCACGACGAGTAATTTGGAATG | 59.317 | 43.478 | 0.00 | 0.00 | 0.00 | 2.67 |
1475 | 1566 | 3.934068 | ACCACGACGAGTAATTTGGAAT | 58.066 | 40.909 | 0.00 | 0.00 | 0.00 | 3.01 |
1476 | 1567 | 3.389925 | ACCACGACGAGTAATTTGGAA | 57.610 | 42.857 | 0.00 | 0.00 | 0.00 | 3.53 |
1477 | 1568 | 3.389925 | AACCACGACGAGTAATTTGGA | 57.610 | 42.857 | 0.00 | 0.00 | 0.00 | 3.53 |
1478 | 1569 | 4.477302 | AAAACCACGACGAGTAATTTGG | 57.523 | 40.909 | 0.00 | 0.00 | 0.00 | 3.28 |
1479 | 1570 | 6.219302 | ACTAAAACCACGACGAGTAATTTG | 57.781 | 37.500 | 0.00 | 2.39 | 0.00 | 2.32 |
1480 | 1571 | 6.479660 | TGAACTAAAACCACGACGAGTAATTT | 59.520 | 34.615 | 0.00 | 0.34 | 0.00 | 1.82 |
1481 | 1572 | 5.984926 | TGAACTAAAACCACGACGAGTAATT | 59.015 | 36.000 | 0.00 | 1.08 | 0.00 | 1.40 |
1482 | 1573 | 5.531634 | TGAACTAAAACCACGACGAGTAAT | 58.468 | 37.500 | 0.00 | 0.00 | 0.00 | 1.89 |
1483 | 1574 | 4.930963 | TGAACTAAAACCACGACGAGTAA | 58.069 | 39.130 | 0.00 | 0.00 | 0.00 | 2.24 |
1484 | 1575 | 4.566545 | TGAACTAAAACCACGACGAGTA | 57.433 | 40.909 | 0.00 | 0.00 | 0.00 | 2.59 |
1485 | 1576 | 3.441496 | TGAACTAAAACCACGACGAGT | 57.559 | 42.857 | 0.00 | 0.00 | 0.00 | 4.18 |
1486 | 1577 | 3.985279 | TCATGAACTAAAACCACGACGAG | 59.015 | 43.478 | 0.00 | 0.00 | 0.00 | 4.18 |
1487 | 1578 | 3.979948 | TCATGAACTAAAACCACGACGA | 58.020 | 40.909 | 0.00 | 0.00 | 0.00 | 4.20 |
1488 | 1579 | 4.451557 | GTTCATGAACTAAAACCACGACG | 58.548 | 43.478 | 27.66 | 0.00 | 38.25 | 5.12 |
1501 | 1592 | 4.209703 | TCGTCGTGGTTTTAGTTCATGAAC | 59.790 | 41.667 | 27.69 | 27.69 | 41.45 | 3.18 |
1502 | 1593 | 4.370049 | TCGTCGTGGTTTTAGTTCATGAA | 58.630 | 39.130 | 3.38 | 3.38 | 0.00 | 2.57 |
1503 | 1594 | 3.979948 | TCGTCGTGGTTTTAGTTCATGA | 58.020 | 40.909 | 0.00 | 0.00 | 0.00 | 3.07 |
1504 | 1595 | 3.739300 | ACTCGTCGTGGTTTTAGTTCATG | 59.261 | 43.478 | 0.00 | 0.00 | 0.00 | 3.07 |
1505 | 1596 | 3.986277 | ACTCGTCGTGGTTTTAGTTCAT | 58.014 | 40.909 | 0.00 | 0.00 | 0.00 | 2.57 |
1506 | 1597 | 3.441496 | ACTCGTCGTGGTTTTAGTTCA | 57.559 | 42.857 | 0.00 | 0.00 | 0.00 | 3.18 |
1507 | 1598 | 6.457851 | AATTACTCGTCGTGGTTTTAGTTC | 57.542 | 37.500 | 0.00 | 0.00 | 0.00 | 3.01 |
1508 | 1599 | 6.258507 | ACAAATTACTCGTCGTGGTTTTAGTT | 59.741 | 34.615 | 0.00 | 0.00 | 0.00 | 2.24 |
1509 | 1600 | 5.754890 | ACAAATTACTCGTCGTGGTTTTAGT | 59.245 | 36.000 | 0.00 | 0.00 | 0.00 | 2.24 |
1510 | 1601 | 6.219302 | ACAAATTACTCGTCGTGGTTTTAG | 57.781 | 37.500 | 0.00 | 0.00 | 0.00 | 1.85 |
1511 | 1602 | 7.563270 | GTTACAAATTACTCGTCGTGGTTTTA | 58.437 | 34.615 | 0.00 | 0.00 | 0.00 | 1.52 |
1512 | 1603 | 6.421405 | GTTACAAATTACTCGTCGTGGTTTT | 58.579 | 36.000 | 0.00 | 0.00 | 0.00 | 2.43 |
1513 | 1604 | 5.332506 | CGTTACAAATTACTCGTCGTGGTTT | 60.333 | 40.000 | 0.00 | 0.00 | 0.00 | 3.27 |
1514 | 1605 | 4.148696 | CGTTACAAATTACTCGTCGTGGTT | 59.851 | 41.667 | 0.00 | 0.00 | 0.00 | 3.67 |
1515 | 1606 | 3.670055 | CGTTACAAATTACTCGTCGTGGT | 59.330 | 43.478 | 0.00 | 0.00 | 0.00 | 4.16 |
1516 | 1607 | 3.059834 | CCGTTACAAATTACTCGTCGTGG | 59.940 | 47.826 | 0.00 | 0.00 | 0.00 | 4.94 |
1517 | 1608 | 3.913763 | TCCGTTACAAATTACTCGTCGTG | 59.086 | 43.478 | 0.00 | 0.00 | 0.00 | 4.35 |
1518 | 1609 | 4.159377 | TCCGTTACAAATTACTCGTCGT | 57.841 | 40.909 | 0.00 | 0.00 | 0.00 | 4.34 |
1519 | 1610 | 3.545078 | CCTCCGTTACAAATTACTCGTCG | 59.455 | 47.826 | 0.00 | 0.00 | 0.00 | 5.12 |
1520 | 1611 | 3.861689 | CCCTCCGTTACAAATTACTCGTC | 59.138 | 47.826 | 0.00 | 0.00 | 0.00 | 4.20 |
1521 | 1612 | 3.511146 | TCCCTCCGTTACAAATTACTCGT | 59.489 | 43.478 | 0.00 | 0.00 | 0.00 | 4.18 |
1522 | 1613 | 4.110482 | CTCCCTCCGTTACAAATTACTCG | 58.890 | 47.826 | 0.00 | 0.00 | 0.00 | 4.18 |
1523 | 1614 | 5.082251 | ACTCCCTCCGTTACAAATTACTC | 57.918 | 43.478 | 0.00 | 0.00 | 0.00 | 2.59 |
1524 | 1615 | 5.105187 | GGTACTCCCTCCGTTACAAATTACT | 60.105 | 44.000 | 0.00 | 0.00 | 0.00 | 2.24 |
1525 | 1616 | 5.105187 | AGGTACTCCCTCCGTTACAAATTAC | 60.105 | 44.000 | 0.00 | 0.00 | 40.71 | 1.89 |
1526 | 1617 | 5.025453 | AGGTACTCCCTCCGTTACAAATTA | 58.975 | 41.667 | 0.00 | 0.00 | 40.71 | 1.40 |
1527 | 1618 | 3.842436 | AGGTACTCCCTCCGTTACAAATT | 59.158 | 43.478 | 0.00 | 0.00 | 40.71 | 1.82 |
1528 | 1619 | 3.197116 | CAGGTACTCCCTCCGTTACAAAT | 59.803 | 47.826 | 0.00 | 0.00 | 43.86 | 2.32 |
1529 | 1620 | 2.564062 | CAGGTACTCCCTCCGTTACAAA | 59.436 | 50.000 | 0.00 | 0.00 | 43.86 | 2.83 |
1530 | 1621 | 2.173519 | CAGGTACTCCCTCCGTTACAA | 58.826 | 52.381 | 0.00 | 0.00 | 43.86 | 2.41 |
1531 | 1622 | 1.843368 | CAGGTACTCCCTCCGTTACA | 58.157 | 55.000 | 0.00 | 0.00 | 43.86 | 2.41 |
1532 | 1623 | 0.459078 | GCAGGTACTCCCTCCGTTAC | 59.541 | 60.000 | 0.00 | 0.00 | 43.86 | 2.50 |
1533 | 1624 | 0.333993 | AGCAGGTACTCCCTCCGTTA | 59.666 | 55.000 | 0.00 | 0.00 | 43.86 | 3.18 |
1534 | 1625 | 1.078710 | AGCAGGTACTCCCTCCGTT | 59.921 | 57.895 | 0.00 | 0.00 | 43.86 | 4.44 |
1535 | 1626 | 1.682684 | CAGCAGGTACTCCCTCCGT | 60.683 | 63.158 | 0.00 | 0.00 | 43.86 | 4.69 |
1536 | 1627 | 3.082579 | GCAGCAGGTACTCCCTCCG | 62.083 | 68.421 | 0.00 | 0.00 | 43.86 | 4.63 |
1537 | 1628 | 2.736826 | GGCAGCAGGTACTCCCTCC | 61.737 | 68.421 | 0.00 | 0.00 | 43.86 | 4.30 |
1538 | 1629 | 1.553690 | TTGGCAGCAGGTACTCCCTC | 61.554 | 60.000 | 0.00 | 0.00 | 43.86 | 4.30 |
1540 | 1631 | 1.078143 | CTTGGCAGCAGGTACTCCC | 60.078 | 63.158 | 0.00 | 0.00 | 34.60 | 4.30 |
1541 | 1632 | 0.324943 | TTCTTGGCAGCAGGTACTCC | 59.675 | 55.000 | 0.00 | 0.00 | 34.60 | 3.85 |
1542 | 1633 | 2.185004 | TTTCTTGGCAGCAGGTACTC | 57.815 | 50.000 | 0.00 | 0.00 | 34.60 | 2.59 |
1543 | 1634 | 2.619074 | GGATTTCTTGGCAGCAGGTACT | 60.619 | 50.000 | 0.00 | 0.00 | 43.88 | 2.73 |
1544 | 1635 | 1.745653 | GGATTTCTTGGCAGCAGGTAC | 59.254 | 52.381 | 0.00 | 0.00 | 0.00 | 3.34 |
1545 | 1636 | 1.678728 | CGGATTTCTTGGCAGCAGGTA | 60.679 | 52.381 | 0.00 | 0.00 | 0.00 | 3.08 |
1546 | 1637 | 0.962356 | CGGATTTCTTGGCAGCAGGT | 60.962 | 55.000 | 0.00 | 0.00 | 0.00 | 4.00 |
1547 | 1638 | 1.805254 | CGGATTTCTTGGCAGCAGG | 59.195 | 57.895 | 0.00 | 0.00 | 0.00 | 4.85 |
1574 | 1665 | 5.183904 | GGAACAGGCAGATGTTAATTTCAGT | 59.816 | 40.000 | 1.68 | 0.00 | 43.32 | 3.41 |
1775 | 1868 | 0.252742 | ACCTTCCCCAGTCACCTAGG | 60.253 | 60.000 | 7.41 | 7.41 | 0.00 | 3.02 |
1796 | 1889 | 4.039366 | AGAAGAAGTTAGAGGTGTGTGTCC | 59.961 | 45.833 | 0.00 | 0.00 | 0.00 | 4.02 |
1822 | 1921 | 6.067217 | AGTGCTACCATGGAGTTAAAAGAT | 57.933 | 37.500 | 21.47 | 0.00 | 0.00 | 2.40 |
1841 | 2005 | 5.539048 | TCCTCCGCTTAAAAGATATAGTGC | 58.461 | 41.667 | 0.00 | 0.00 | 0.00 | 4.40 |
1842 | 2006 | 7.711339 | AGTTTCCTCCGCTTAAAAGATATAGTG | 59.289 | 37.037 | 0.00 | 0.00 | 0.00 | 2.74 |
1844 | 2008 | 7.171678 | CCAGTTTCCTCCGCTTAAAAGATATAG | 59.828 | 40.741 | 0.00 | 0.00 | 0.00 | 1.31 |
2069 | 2233 | 9.191995 | AGTAAAATCAAACAAATTGGTCGATTC | 57.808 | 29.630 | 0.00 | 0.00 | 39.62 | 2.52 |
2076 | 2240 | 9.866936 | CACATGAAGTAAAATCAAACAAATTGG | 57.133 | 29.630 | 0.00 | 0.00 | 39.62 | 3.16 |
2087 | 2251 | 8.268738 | GCACTTGTTTTCACATGAAGTAAAATC | 58.731 | 33.333 | 0.00 | 0.00 | 35.21 | 2.17 |
2097 | 2261 | 4.501559 | CAGACTTGCACTTGTTTTCACATG | 59.498 | 41.667 | 0.00 | 0.00 | 34.81 | 3.21 |
2098 | 2262 | 4.158394 | ACAGACTTGCACTTGTTTTCACAT | 59.842 | 37.500 | 0.00 | 0.00 | 31.06 | 3.21 |
2113 | 2277 | 4.576463 | AGCCAAGTAACTGAAACAGACTTG | 59.424 | 41.667 | 18.12 | 18.12 | 41.65 | 3.16 |
2136 | 2300 | 7.218614 | TCAATTGGTAACCGAACTCTTTAAGA | 58.781 | 34.615 | 5.42 | 0.00 | 0.00 | 2.10 |
2141 | 2305 | 6.702716 | TTTTCAATTGGTAACCGAACTCTT | 57.297 | 33.333 | 5.42 | 0.00 | 0.00 | 2.85 |
2179 | 2343 | 4.377431 | GCTAACATAATGTCAGCATACGGC | 60.377 | 45.833 | 0.00 | 0.00 | 41.27 | 5.68 |
2180 | 2344 | 4.991056 | AGCTAACATAATGTCAGCATACGG | 59.009 | 41.667 | 6.40 | 0.00 | 44.04 | 4.02 |
2182 | 2346 | 7.482654 | TTCAGCTAACATAATGTCAGCATAC | 57.517 | 36.000 | 6.40 | 0.00 | 44.04 | 2.39 |
2184 | 2348 | 5.008415 | GCTTCAGCTAACATAATGTCAGCAT | 59.992 | 40.000 | 6.40 | 0.00 | 44.04 | 3.79 |
2199 | 2363 | 6.710295 | TCTTAGTCAACATTTTGCTTCAGCTA | 59.290 | 34.615 | 0.00 | 0.00 | 42.66 | 3.32 |
2210 | 2374 | 6.150140 | GTGCTCTCCAATCTTAGTCAACATTT | 59.850 | 38.462 | 0.00 | 0.00 | 0.00 | 2.32 |
2217 | 2381 | 3.895232 | TGGTGCTCTCCAATCTTAGTC | 57.105 | 47.619 | 0.00 | 0.00 | 34.24 | 2.59 |
2222 | 2386 | 3.726557 | TCATTTGGTGCTCTCCAATCT | 57.273 | 42.857 | 4.49 | 0.00 | 45.30 | 2.40 |
2225 | 2389 | 4.405358 | AGTTTTTCATTTGGTGCTCTCCAA | 59.595 | 37.500 | 0.00 | 0.00 | 44.48 | 3.53 |
2257 | 2423 | 5.149973 | TGTTGCAATTTTCATGGTAGCAT | 57.850 | 34.783 | 0.59 | 0.40 | 0.00 | 3.79 |
2307 | 2473 | 3.609853 | TGGTCTTCATATGTCCAACTGC | 58.390 | 45.455 | 1.90 | 0.00 | 0.00 | 4.40 |
2338 | 2504 | 0.807667 | GGAGAATGTCAGCGATGCGT | 60.808 | 55.000 | 0.00 | 0.00 | 0.00 | 5.24 |
2344 | 2510 | 1.081892 | CAACAGGGAGAATGTCAGCG | 58.918 | 55.000 | 0.00 | 0.00 | 0.00 | 5.18 |
2491 | 2657 | 4.005650 | TGCATGTCATTCAGAAGGAAGTC | 58.994 | 43.478 | 0.00 | 0.00 | 39.30 | 3.01 |
2559 | 2725 | 7.222031 | GGACACGGAATTTATTTTCTATTTGCC | 59.778 | 37.037 | 0.00 | 0.00 | 0.00 | 4.52 |
2596 | 2845 | 8.677300 | GCAAATACAGAGGATTAAGACATTCAA | 58.323 | 33.333 | 0.00 | 0.00 | 0.00 | 2.69 |
2598 | 2847 | 8.443953 | AGCAAATACAGAGGATTAAGACATTC | 57.556 | 34.615 | 0.00 | 0.00 | 0.00 | 2.67 |
2599 | 2848 | 8.814038 | AAGCAAATACAGAGGATTAAGACATT | 57.186 | 30.769 | 0.00 | 0.00 | 0.00 | 2.71 |
2601 | 2850 | 9.547753 | GATAAGCAAATACAGAGGATTAAGACA | 57.452 | 33.333 | 0.00 | 0.00 | 0.00 | 3.41 |
2602 | 2851 | 9.771534 | AGATAAGCAAATACAGAGGATTAAGAC | 57.228 | 33.333 | 0.00 | 0.00 | 0.00 | 3.01 |
2606 | 2856 | 7.378966 | CGGAGATAAGCAAATACAGAGGATTA | 58.621 | 38.462 | 0.00 | 0.00 | 0.00 | 1.75 |
2610 | 2860 | 4.039245 | TCCGGAGATAAGCAAATACAGAGG | 59.961 | 45.833 | 0.00 | 0.00 | 0.00 | 3.69 |
2625 | 2875 | 5.070001 | TGTTGAAATCTTTGTTCCGGAGAT | 58.930 | 37.500 | 3.34 | 0.00 | 0.00 | 2.75 |
2626 | 2876 | 4.456535 | TGTTGAAATCTTTGTTCCGGAGA | 58.543 | 39.130 | 3.34 | 0.00 | 0.00 | 3.71 |
2628 | 2878 | 4.582656 | ACATGTTGAAATCTTTGTTCCGGA | 59.417 | 37.500 | 0.00 | 0.00 | 0.00 | 5.14 |
2675 | 2926 | 5.675538 | ACAAGAGGGAATAGATCTTTTCCG | 58.324 | 41.667 | 28.17 | 20.00 | 40.26 | 4.30 |
2690 | 2941 | 3.899052 | TTACCGACCATAACAAGAGGG | 57.101 | 47.619 | 0.00 | 0.00 | 0.00 | 4.30 |
2693 | 2944 | 6.105397 | AGAACTTTACCGACCATAACAAGA | 57.895 | 37.500 | 0.00 | 0.00 | 0.00 | 3.02 |
2727 | 2978 | 2.225117 | CCTTTCCAATGTCCCACCTCTT | 60.225 | 50.000 | 0.00 | 0.00 | 0.00 | 2.85 |
2744 | 2995 | 8.472007 | TGGTAACACAATTTATCACTTCCTTT | 57.528 | 30.769 | 0.00 | 0.00 | 46.17 | 3.11 |
2774 | 3025 | 4.855018 | TGTATTGGATATGCCCCTGGATAA | 59.145 | 41.667 | 0.00 | 0.00 | 34.97 | 1.75 |
2813 | 3064 | 8.418662 | TGGTAGATACATGGTGTGTTTATAGTC | 58.581 | 37.037 | 0.00 | 0.00 | 42.29 | 2.59 |
2823 | 3074 | 5.310594 | AGGCATTATGGTAGATACATGGTGT | 59.689 | 40.000 | 0.00 | 0.00 | 0.00 | 4.16 |
2827 | 3078 | 8.084073 | CCAAAAAGGCATTATGGTAGATACATG | 58.916 | 37.037 | 7.49 | 0.00 | 0.00 | 3.21 |
2828 | 3079 | 8.004215 | TCCAAAAAGGCATTATGGTAGATACAT | 58.996 | 33.333 | 13.54 | 0.00 | 37.29 | 2.29 |
2831 | 3082 | 8.830915 | TTTCCAAAAAGGCATTATGGTAGATA | 57.169 | 30.769 | 13.54 | 0.00 | 37.29 | 1.98 |
2832 | 3083 | 7.732222 | TTTCCAAAAAGGCATTATGGTAGAT | 57.268 | 32.000 | 13.54 | 0.00 | 37.29 | 1.98 |
2848 | 3099 | 5.449862 | CGGAATCGGCAGAATATTTCCAAAA | 60.450 | 40.000 | 14.62 | 0.00 | 33.53 | 2.44 |
2849 | 3100 | 4.036262 | CGGAATCGGCAGAATATTTCCAAA | 59.964 | 41.667 | 14.62 | 0.00 | 33.53 | 3.28 |
2901 | 3152 | 7.530426 | ACTAAAATCTTCTCTGGCATGTTTT | 57.470 | 32.000 | 0.00 | 0.00 | 0.00 | 2.43 |
2905 | 3156 | 5.106038 | TGCAACTAAAATCTTCTCTGGCATG | 60.106 | 40.000 | 0.00 | 0.00 | 0.00 | 4.06 |
2908 | 3159 | 5.124457 | TGATGCAACTAAAATCTTCTCTGGC | 59.876 | 40.000 | 0.00 | 0.00 | 0.00 | 4.85 |
2909 | 3160 | 6.183360 | CCTGATGCAACTAAAATCTTCTCTGG | 60.183 | 42.308 | 0.00 | 0.00 | 0.00 | 3.86 |
2921 | 3172 | 8.458843 | GCTTAACTTTATTCCTGATGCAACTAA | 58.541 | 33.333 | 0.00 | 0.00 | 0.00 | 2.24 |
2956 | 3207 | 6.313658 | GCTCAACACCATTTCTTCAACTTTTT | 59.686 | 34.615 | 0.00 | 0.00 | 0.00 | 1.94 |
2976 | 3227 | 6.005823 | TGAAGAAATTCATTCCTGAGCTCAA | 58.994 | 36.000 | 18.85 | 3.02 | 38.94 | 3.02 |
2977 | 3228 | 5.563592 | TGAAGAAATTCATTCCTGAGCTCA | 58.436 | 37.500 | 17.19 | 17.19 | 38.94 | 4.26 |
2978 | 3229 | 5.879223 | TCTGAAGAAATTCATTCCTGAGCTC | 59.121 | 40.000 | 6.82 | 6.82 | 38.94 | 4.09 |
2979 | 3230 | 5.813383 | TCTGAAGAAATTCATTCCTGAGCT | 58.187 | 37.500 | 0.00 | 0.00 | 38.94 | 4.09 |
2980 | 3231 | 6.238703 | GGATCTGAAGAAATTCATTCCTGAGC | 60.239 | 42.308 | 0.00 | 1.89 | 38.94 | 4.26 |
2981 | 3232 | 7.055378 | AGGATCTGAAGAAATTCATTCCTGAG | 58.945 | 38.462 | 16.03 | 0.00 | 39.74 | 3.35 |
2982 | 3233 | 6.966751 | AGGATCTGAAGAAATTCATTCCTGA | 58.033 | 36.000 | 16.03 | 2.20 | 39.74 | 3.86 |
2983 | 3234 | 7.028926 | CAGGATCTGAAGAAATTCATTCCTG | 57.971 | 40.000 | 22.43 | 22.43 | 44.95 | 3.86 |
2984 | 3235 | 6.966751 | TCAGGATCTGAAGAAATTCATTCCT | 58.033 | 36.000 | 13.04 | 13.04 | 40.84 | 3.36 |
2985 | 3236 | 7.012232 | GTCTCAGGATCTGAAGAAATTCATTCC | 59.988 | 40.741 | 0.00 | 10.10 | 40.18 | 3.01 |
2986 | 3237 | 7.551974 | TGTCTCAGGATCTGAAGAAATTCATTC | 59.448 | 37.037 | 0.00 | 0.00 | 40.18 | 2.67 |
2987 | 3238 | 7.400439 | TGTCTCAGGATCTGAAGAAATTCATT | 58.600 | 34.615 | 0.00 | 0.00 | 40.18 | 2.57 |
2988 | 3239 | 6.955364 | TGTCTCAGGATCTGAAGAAATTCAT | 58.045 | 36.000 | 0.00 | 0.00 | 40.18 | 2.57 |
2989 | 3240 | 6.364568 | TGTCTCAGGATCTGAAGAAATTCA | 57.635 | 37.500 | 0.00 | 0.00 | 40.18 | 2.57 |
2990 | 3241 | 7.148272 | CCTTTGTCTCAGGATCTGAAGAAATTC | 60.148 | 40.741 | 0.00 | 0.00 | 40.18 | 2.17 |
2991 | 3242 | 6.658391 | CCTTTGTCTCAGGATCTGAAGAAATT | 59.342 | 38.462 | 0.00 | 0.00 | 40.18 | 1.82 |
2992 | 3243 | 6.179040 | CCTTTGTCTCAGGATCTGAAGAAAT | 58.821 | 40.000 | 0.00 | 0.00 | 40.18 | 2.17 |
2993 | 3244 | 5.072329 | ACCTTTGTCTCAGGATCTGAAGAAA | 59.928 | 40.000 | 0.00 | 2.30 | 40.18 | 2.52 |
2994 | 3245 | 4.594920 | ACCTTTGTCTCAGGATCTGAAGAA | 59.405 | 41.667 | 0.00 | 0.00 | 40.18 | 2.52 |
2995 | 3246 | 4.163427 | ACCTTTGTCTCAGGATCTGAAGA | 58.837 | 43.478 | 0.00 | 0.00 | 40.18 | 2.87 |
2996 | 3247 | 4.502962 | GACCTTTGTCTCAGGATCTGAAG | 58.497 | 47.826 | 0.00 | 0.00 | 40.18 | 3.02 |
2997 | 3248 | 3.261897 | GGACCTTTGTCTCAGGATCTGAA | 59.738 | 47.826 | 0.00 | 0.00 | 40.18 | 3.02 |
2998 | 3249 | 2.834549 | GGACCTTTGTCTCAGGATCTGA | 59.165 | 50.000 | 0.00 | 0.00 | 41.47 | 3.27 |
2999 | 3250 | 2.568956 | TGGACCTTTGTCTCAGGATCTG | 59.431 | 50.000 | 0.00 | 0.00 | 41.47 | 2.90 |
3000 | 3251 | 2.907892 | TGGACCTTTGTCTCAGGATCT | 58.092 | 47.619 | 0.00 | 0.00 | 41.47 | 2.75 |
3001 | 3252 | 3.703001 | TTGGACCTTTGTCTCAGGATC | 57.297 | 47.619 | 0.00 | 0.00 | 41.47 | 3.36 |
3002 | 3253 | 4.453480 | TTTTGGACCTTTGTCTCAGGAT | 57.547 | 40.909 | 0.00 | 0.00 | 41.47 | 3.24 |
3003 | 3254 | 3.943671 | TTTTGGACCTTTGTCTCAGGA | 57.056 | 42.857 | 0.00 | 0.00 | 41.47 | 3.86 |
3004 | 3255 | 6.840780 | ATTATTTTGGACCTTTGTCTCAGG | 57.159 | 37.500 | 0.00 | 0.00 | 41.47 | 3.86 |
3005 | 3256 | 8.115490 | AGAATTATTTTGGACCTTTGTCTCAG | 57.885 | 34.615 | 0.00 | 0.00 | 41.47 | 3.35 |
3006 | 3257 | 7.723616 | TGAGAATTATTTTGGACCTTTGTCTCA | 59.276 | 33.333 | 0.00 | 0.00 | 41.47 | 3.27 |
3007 | 3258 | 8.110860 | TGAGAATTATTTTGGACCTTTGTCTC | 57.889 | 34.615 | 0.00 | 0.00 | 41.47 | 3.36 |
3008 | 3259 | 8.655935 | ATGAGAATTATTTTGGACCTTTGTCT | 57.344 | 30.769 | 0.00 | 0.00 | 41.47 | 3.41 |
3010 | 3261 | 9.753674 | TCTATGAGAATTATTTTGGACCTTTGT | 57.246 | 29.630 | 0.00 | 0.00 | 0.00 | 2.83 |
3014 | 3265 | 8.907885 | GCTTTCTATGAGAATTATTTTGGACCT | 58.092 | 33.333 | 0.00 | 0.00 | 33.67 | 3.85 |
3015 | 3266 | 8.907885 | AGCTTTCTATGAGAATTATTTTGGACC | 58.092 | 33.333 | 0.00 | 0.00 | 33.67 | 4.46 |
3278 | 3529 | 8.923270 | ACTTTCTTTCCCTTTTCACATATTTGA | 58.077 | 29.630 | 0.00 | 0.00 | 0.00 | 2.69 |
3363 | 3614 | 9.206690 | AGATCTAACAGAGGACAAAATCATCTA | 57.793 | 33.333 | 0.00 | 0.00 | 46.74 | 1.98 |
3369 | 3620 | 6.479884 | AGCAAGATCTAACAGAGGACAAAAT | 58.520 | 36.000 | 0.00 | 0.00 | 0.00 | 1.82 |
3372 | 3623 | 4.081420 | GGAGCAAGATCTAACAGAGGACAA | 60.081 | 45.833 | 0.00 | 0.00 | 0.00 | 3.18 |
3383 | 3634 | 3.300388 | AGGTCATTCGGAGCAAGATCTA | 58.700 | 45.455 | 0.00 | 0.00 | 46.51 | 1.98 |
3416 | 3668 | 2.594654 | GAGTATCTTTCAGCACGTGTCG | 59.405 | 50.000 | 18.38 | 8.72 | 0.00 | 4.35 |
3441 | 3693 | 2.156098 | GCCACACTTATTTTGGGACGA | 58.844 | 47.619 | 0.00 | 0.00 | 0.00 | 4.20 |
3459 | 3711 | 3.265791 | CCAGAGTTGTATCAAGTCAGCC | 58.734 | 50.000 | 16.26 | 0.00 | 0.00 | 4.85 |
3469 | 3721 | 2.708861 | TGTGAACCACCCAGAGTTGTAT | 59.291 | 45.455 | 0.00 | 0.00 | 32.73 | 2.29 |
3477 | 3729 | 2.482721 | GTCGTATTTGTGAACCACCCAG | 59.517 | 50.000 | 0.00 | 0.00 | 32.73 | 4.45 |
3495 | 3747 | 4.433615 | AGTGATGTTATGCTTACTGGTCG | 58.566 | 43.478 | 0.00 | 0.00 | 0.00 | 4.79 |
3631 | 3883 | 5.347620 | TGAAAGTAGCGCCCTCTAATTAA | 57.652 | 39.130 | 2.29 | 0.00 | 0.00 | 1.40 |
3706 | 3958 | 8.155821 | TGAAGTACCTATATGTCTCTCTTTCG | 57.844 | 38.462 | 0.00 | 0.00 | 0.00 | 3.46 |
3893 | 4175 | 9.509855 | GTCTAGTTGTTAGTCATGATAGAAGTG | 57.490 | 37.037 | 0.00 | 0.00 | 0.00 | 3.16 |
3899 | 4181 | 9.639601 | CAAGTTGTCTAGTTGTTAGTCATGATA | 57.360 | 33.333 | 0.00 | 0.00 | 33.33 | 2.15 |
3950 | 4232 | 4.518970 | TGTGGAGGAAGCTATTGTTTCAAC | 59.481 | 41.667 | 6.14 | 0.14 | 35.50 | 3.18 |
3957 | 4239 | 3.629398 | GGTGATTGTGGAGGAAGCTATTG | 59.371 | 47.826 | 0.00 | 0.00 | 0.00 | 1.90 |
3968 | 4250 | 1.710244 | ACCATCTTGGGTGATTGTGGA | 59.290 | 47.619 | 0.00 | 0.00 | 43.37 | 4.02 |
3978 | 4260 | 8.593679 | TGTAATATACTGATGTACCATCTTGGG | 58.406 | 37.037 | 5.87 | 0.00 | 43.37 | 4.12 |
4036 | 4318 | 1.424638 | ACATTATGGGACGGAGGGAG | 58.575 | 55.000 | 0.00 | 0.00 | 0.00 | 4.30 |
4037 | 4319 | 2.779429 | TACATTATGGGACGGAGGGA | 57.221 | 50.000 | 0.00 | 0.00 | 0.00 | 4.20 |
4038 | 4320 | 2.969950 | TCTTACATTATGGGACGGAGGG | 59.030 | 50.000 | 0.00 | 0.00 | 0.00 | 4.30 |
4039 | 4321 | 3.552273 | CGTCTTACATTATGGGACGGAGG | 60.552 | 52.174 | 20.50 | 5.87 | 43.69 | 4.30 |
4040 | 4322 | 3.639538 | CGTCTTACATTATGGGACGGAG | 58.360 | 50.000 | 20.50 | 2.74 | 43.69 | 4.63 |
4041 | 4323 | 3.720949 | CGTCTTACATTATGGGACGGA | 57.279 | 47.619 | 20.50 | 2.30 | 43.69 | 4.69 |
4063 | 4345 | 8.158132 | TCCCATAATGTAGTGTAGTGTCAAAAA | 58.842 | 33.333 | 0.00 | 0.00 | 0.00 | 1.94 |
4064 | 4346 | 7.604927 | GTCCCATAATGTAGTGTAGTGTCAAAA | 59.395 | 37.037 | 0.00 | 0.00 | 0.00 | 2.44 |
4065 | 4347 | 7.101054 | GTCCCATAATGTAGTGTAGTGTCAAA | 58.899 | 38.462 | 0.00 | 0.00 | 0.00 | 2.69 |
4066 | 4348 | 6.626402 | CGTCCCATAATGTAGTGTAGTGTCAA | 60.626 | 42.308 | 0.00 | 0.00 | 0.00 | 3.18 |
4067 | 4349 | 5.163591 | CGTCCCATAATGTAGTGTAGTGTCA | 60.164 | 44.000 | 0.00 | 0.00 | 0.00 | 3.58 |
4068 | 4350 | 5.279384 | CGTCCCATAATGTAGTGTAGTGTC | 58.721 | 45.833 | 0.00 | 0.00 | 0.00 | 3.67 |
4069 | 4351 | 4.098960 | CCGTCCCATAATGTAGTGTAGTGT | 59.901 | 45.833 | 0.00 | 0.00 | 0.00 | 3.55 |
4070 | 4352 | 4.340097 | TCCGTCCCATAATGTAGTGTAGTG | 59.660 | 45.833 | 0.00 | 0.00 | 0.00 | 2.74 |
4071 | 4353 | 4.539726 | TCCGTCCCATAATGTAGTGTAGT | 58.460 | 43.478 | 0.00 | 0.00 | 0.00 | 2.73 |
4072 | 4354 | 4.022242 | CCTCCGTCCCATAATGTAGTGTAG | 60.022 | 50.000 | 0.00 | 0.00 | 0.00 | 2.74 |
4073 | 4355 | 3.893200 | CCTCCGTCCCATAATGTAGTGTA | 59.107 | 47.826 | 0.00 | 0.00 | 0.00 | 2.90 |
4074 | 4356 | 2.698797 | CCTCCGTCCCATAATGTAGTGT | 59.301 | 50.000 | 0.00 | 0.00 | 0.00 | 3.55 |
4075 | 4357 | 2.037251 | CCCTCCGTCCCATAATGTAGTG | 59.963 | 54.545 | 0.00 | 0.00 | 0.00 | 2.74 |
4076 | 4358 | 2.090943 | TCCCTCCGTCCCATAATGTAGT | 60.091 | 50.000 | 0.00 | 0.00 | 0.00 | 2.73 |
4077 | 4359 | 2.563179 | CTCCCTCCGTCCCATAATGTAG | 59.437 | 54.545 | 0.00 | 0.00 | 0.00 | 2.74 |
4078 | 4360 | 2.090943 | ACTCCCTCCGTCCCATAATGTA | 60.091 | 50.000 | 0.00 | 0.00 | 0.00 | 2.29 |
4079 | 4361 | 1.344087 | ACTCCCTCCGTCCCATAATGT | 60.344 | 52.381 | 0.00 | 0.00 | 0.00 | 2.71 |
4080 | 4362 | 1.424638 | ACTCCCTCCGTCCCATAATG | 58.575 | 55.000 | 0.00 | 0.00 | 0.00 | 1.90 |
4081 | 4363 | 2.449730 | TCTACTCCCTCCGTCCCATAAT | 59.550 | 50.000 | 0.00 | 0.00 | 0.00 | 1.28 |
4082 | 4364 | 1.854939 | TCTACTCCCTCCGTCCCATAA | 59.145 | 52.381 | 0.00 | 0.00 | 0.00 | 1.90 |
4083 | 4365 | 1.526315 | TCTACTCCCTCCGTCCCATA | 58.474 | 55.000 | 0.00 | 0.00 | 0.00 | 2.74 |
4084 | 4366 | 0.635009 | TTCTACTCCCTCCGTCCCAT | 59.365 | 55.000 | 0.00 | 0.00 | 0.00 | 4.00 |
4085 | 4367 | 0.635009 | ATTCTACTCCCTCCGTCCCA | 59.365 | 55.000 | 0.00 | 0.00 | 0.00 | 4.37 |
4086 | 4368 | 1.790818 | AATTCTACTCCCTCCGTCCC | 58.209 | 55.000 | 0.00 | 0.00 | 0.00 | 4.46 |
4087 | 4369 | 3.908643 | AAAATTCTACTCCCTCCGTCC | 57.091 | 47.619 | 0.00 | 0.00 | 0.00 | 4.79 |
4088 | 4370 | 8.953368 | TTTATTAAAATTCTACTCCCTCCGTC | 57.047 | 34.615 | 0.00 | 0.00 | 0.00 | 4.79 |
4089 | 4371 | 9.392259 | CTTTTATTAAAATTCTACTCCCTCCGT | 57.608 | 33.333 | 2.20 | 0.00 | 0.00 | 4.69 |
4090 | 4372 | 8.837389 | CCTTTTATTAAAATTCTACTCCCTCCG | 58.163 | 37.037 | 2.20 | 0.00 | 0.00 | 4.63 |
4091 | 4373 | 9.132923 | CCCTTTTATTAAAATTCTACTCCCTCC | 57.867 | 37.037 | 2.20 | 0.00 | 0.00 | 4.30 |
4092 | 4374 | 9.132923 | CCCCTTTTATTAAAATTCTACTCCCTC | 57.867 | 37.037 | 2.20 | 0.00 | 0.00 | 4.30 |
4093 | 4375 | 8.065627 | CCCCCTTTTATTAAAATTCTACTCCCT | 58.934 | 37.037 | 2.20 | 0.00 | 0.00 | 4.20 |
4094 | 4376 | 8.063153 | TCCCCCTTTTATTAAAATTCTACTCCC | 58.937 | 37.037 | 2.20 | 0.00 | 0.00 | 4.30 |
4095 | 4377 | 9.483489 | TTCCCCCTTTTATTAAAATTCTACTCC | 57.517 | 33.333 | 2.20 | 0.00 | 0.00 | 3.85 |
4121 | 4403 | 2.837498 | ACGCGGTGTACCTTAGTTTTT | 58.163 | 42.857 | 12.47 | 0.00 | 0.00 | 1.94 |
4122 | 4404 | 2.531522 | ACGCGGTGTACCTTAGTTTT | 57.468 | 45.000 | 12.47 | 0.00 | 0.00 | 2.43 |
4123 | 4405 | 2.531522 | AACGCGGTGTACCTTAGTTT | 57.468 | 45.000 | 12.47 | 0.00 | 0.00 | 2.66 |
4124 | 4406 | 2.531522 | AAACGCGGTGTACCTTAGTT | 57.468 | 45.000 | 12.47 | 0.51 | 0.00 | 2.24 |
4125 | 4407 | 3.514645 | CATAAACGCGGTGTACCTTAGT | 58.485 | 45.455 | 12.47 | 0.00 | 0.00 | 2.24 |
Based at the University of Bristol with support from BBSRC.
AutoCloner maintained by Alex Coulton.