Multiple sequence alignment - TraesCS2B01G267300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G267300 chr2B 100.000 7979 0 0 1 7979 359930686 359938664 0.000000e+00 14735.0
1 TraesCS2B01G267300 chr2B 79.186 221 30 9 2623 2837 84803070 84803280 1.080000e-28 139.0
2 TraesCS2B01G267300 chr2D 97.572 3459 66 9 4132 7585 307858040 307854595 0.000000e+00 5906.0
3 TraesCS2B01G267300 chr2D 96.709 1337 40 3 2796 4131 307859411 307858078 0.000000e+00 2222.0
4 TraesCS2B01G267300 chr2D 94.058 1279 52 10 1639 2897 307860660 307859386 0.000000e+00 1919.0
5 TraesCS2B01G267300 chr2D 96.270 697 13 6 804 1490 307861352 307860659 0.000000e+00 1131.0
6 TraesCS2B01G267300 chr2D 93.863 554 13 3 7355 7890 307854594 307854044 0.000000e+00 815.0
7 TraesCS2B01G267300 chr2D 86.547 223 28 2 1 221 307861954 307861732 2.220000e-60 244.0
8 TraesCS2B01G267300 chr2D 93.548 93 6 0 7887 7979 393577489 393577581 1.080000e-28 139.0
9 TraesCS2B01G267300 chr2A 97.212 2869 64 8 4132 6990 388678325 388675463 0.000000e+00 4841.0
10 TraesCS2B01G267300 chr2A 91.583 1200 88 6 1810 2996 388683062 388681863 0.000000e+00 1644.0
11 TraesCS2B01G267300 chr2A 97.789 814 18 0 3318 4131 388679175 388678362 0.000000e+00 1404.0
12 TraesCS2B01G267300 chr2A 96.978 695 11 4 805 1490 388684294 388683601 0.000000e+00 1158.0
13 TraesCS2B01G267300 chr2A 94.019 535 15 3 7306 7825 388675027 388674495 0.000000e+00 795.0
14 TraesCS2B01G267300 chr2A 93.860 342 15 3 2981 3322 388681502 388681167 1.990000e-140 510.0
15 TraesCS2B01G267300 chr2A 92.606 284 8 2 7027 7310 388675466 388675196 5.800000e-106 396.0
16 TraesCS2B01G267300 chr2A 87.783 221 25 1 1 219 388685167 388684947 2.860000e-64 257.0
17 TraesCS2B01G267300 chr2A 90.476 105 10 0 617 721 776160535 776160639 1.080000e-28 139.0
18 TraesCS2B01G267300 chr2A 88.991 109 12 0 613 721 743068809 743068917 1.400000e-27 135.0
19 TraesCS2B01G267300 chr2A 80.992 121 19 3 1695 1811 14634128 14634008 8.530000e-15 93.5
20 TraesCS2B01G267300 chr7A 82.803 471 68 5 2752 3214 621914509 621914044 7.450000e-110 409.0
21 TraesCS2B01G267300 chr7A 75.443 790 137 44 1838 2606 445216446 445215693 1.660000e-86 331.0
22 TraesCS2B01G267300 chr7A 80.622 418 71 7 7207 7620 660917777 660917366 1.670000e-81 315.0
23 TraesCS2B01G267300 chr7A 78.692 474 85 8 2746 3212 122768385 122767921 1.300000e-77 302.0
24 TraesCS2B01G267300 chr7A 84.483 232 35 1 2858 3089 445215481 445215251 2.240000e-55 228.0
25 TraesCS2B01G267300 chr7A 90.265 113 9 2 610 721 81096851 81096962 6.450000e-31 147.0
26 TraesCS2B01G267300 chr5B 85.465 344 40 10 7215 7552 670508775 670509114 4.580000e-92 350.0
27 TraesCS2B01G267300 chr5B 89.017 173 9 6 1475 1640 412686650 412686481 1.050000e-48 206.0
28 TraesCS2B01G267300 chr5B 89.873 158 11 3 1486 1638 665963795 665963952 1.760000e-46 198.0
29 TraesCS2B01G267300 chr5B 92.473 93 7 0 7887 7979 123694204 123694296 5.020000e-27 134.0
30 TraesCS2B01G267300 chr7B 80.420 429 77 6 7216 7637 628335818 628335390 3.590000e-83 320.0
31 TraesCS2B01G267300 chr7B 76.565 623 106 16 2600 3212 583931611 583931019 1.010000e-78 305.0
32 TraesCS2B01G267300 chr7B 82.845 239 40 1 2858 3096 392640607 392640370 6.270000e-51 213.0
33 TraesCS2B01G267300 chr7B 96.774 93 3 0 7887 7979 153549661 153549569 1.070000e-33 156.0
34 TraesCS2B01G267300 chr7B 89.535 86 8 1 378 463 372023812 372023728 3.040000e-19 108.0
35 TraesCS2B01G267300 chr7B 86.000 100 14 0 2635 2734 596986456 596986357 3.040000e-19 108.0
36 TraesCS2B01G267300 chr4B 74.905 789 154 34 1834 2606 455402100 455401340 3.590000e-83 320.0
37 TraesCS2B01G267300 chr4B 91.411 163 7 4 1489 1644 19746356 19746518 4.850000e-52 217.0
38 TraesCS2B01G267300 chr4B 81.865 193 29 4 2906 3096 455401118 455400930 2.980000e-34 158.0
39 TraesCS2B01G267300 chr4B 95.604 91 4 0 7889 7979 495321536 495321446 6.450000e-31 147.0
40 TraesCS2B01G267300 chr4B 89.535 86 9 0 377 462 619443332 619443417 8.470000e-20 110.0
41 TraesCS2B01G267300 chr4B 88.506 87 10 0 377 463 27782701 27782615 1.100000e-18 106.0
42 TraesCS2B01G267300 chr4B 84.112 107 15 2 377 481 378766241 378766135 1.420000e-17 102.0
43 TraesCS2B01G267300 chr4B 84.416 77 9 1 2860 2936 132319083 132319156 1.110000e-08 73.1
44 TraesCS2B01G267300 chr4B 83.607 61 8 2 2969 3028 13376096 13376037 1.000000e-03 56.5
45 TraesCS2B01G267300 chr7D 76.874 627 94 22 2604 3212 540628506 540627913 2.800000e-79 307.0
46 TraesCS2B01G267300 chr7D 75.000 660 121 30 1967 2601 109586365 109585725 1.710000e-66 265.0
47 TraesCS2B01G267300 chr7D 80.290 345 45 19 1839 2177 393028130 393027803 1.030000e-58 239.0
48 TraesCS2B01G267300 chr7D 82.427 239 42 0 2858 3096 393027310 393027072 8.110000e-50 209.0
49 TraesCS2B01G267300 chr7D 88.304 171 10 5 1486 1646 339016984 339017154 6.320000e-46 196.0
50 TraesCS2B01G267300 chr7D 76.562 384 70 14 1846 2225 451976273 451975906 8.170000e-45 193.0
51 TraesCS2B01G267300 chr7D 90.654 107 9 1 615 721 474261629 474261734 3.000000e-29 141.0
52 TraesCS2B01G267300 chr7D 85.833 120 15 2 7212 7329 571797654 571797535 8.410000e-25 126.0
53 TraesCS2B01G267300 chr7D 100.000 28 0 0 1809 1836 57032608 57032635 1.400000e-02 52.8
54 TraesCS2B01G267300 chr7D 100.000 28 0 0 1809 1836 107917280 107917253 1.400000e-02 52.8
55 TraesCS2B01G267300 chr5D 78.000 500 82 16 2608 3091 98805284 98805771 1.010000e-73 289.0
56 TraesCS2B01G267300 chr5D 75.730 651 106 27 2600 3218 207965889 207965259 6.100000e-71 279.0
57 TraesCS2B01G267300 chr5D 75.269 651 109 27 2600 3218 207994980 207994350 6.140000e-66 263.0
58 TraesCS2B01G267300 chr5A 77.645 501 88 14 2604 3090 104156922 104156432 4.710000e-72 283.0
59 TraesCS2B01G267300 chr5A 88.372 86 9 1 377 462 652996838 652996922 1.420000e-17 102.0
60 TraesCS2B01G267300 chr5A 86.022 93 11 2 377 469 561812425 561812335 1.830000e-16 99.0
61 TraesCS2B01G267300 chr5A 73.684 228 51 8 2292 2514 504777182 504776959 6.640000e-11 80.5
62 TraesCS2B01G267300 chr1B 77.953 381 65 12 1858 2234 554036886 554036521 3.750000e-53 220.0
63 TraesCS2B01G267300 chr1B 77.366 243 49 3 2968 3206 489807705 489807945 1.080000e-28 139.0
64 TraesCS2B01G267300 chrUn 91.026 156 11 2 1489 1642 194986465 194986619 2.920000e-49 207.0
65 TraesCS2B01G267300 chr6B 90.909 154 11 2 1491 1642 138632087 138631935 3.770000e-48 204.0
66 TraesCS2B01G267300 chr6B 95.699 93 4 0 7887 7979 607330853 607330945 4.990000e-32 150.0
67 TraesCS2B01G267300 chr6B 90.476 105 9 1 617 721 507910825 507910722 3.880000e-28 137.0
68 TraesCS2B01G267300 chr6B 91.954 87 7 0 377 463 679732992 679732906 1.090000e-23 122.0
69 TraesCS2B01G267300 chr6B 84.270 89 14 0 1686 1774 29667454 29667542 3.970000e-13 87.9
70 TraesCS2B01G267300 chr3A 91.026 156 6 3 1488 1640 745072425 745072575 3.770000e-48 204.0
71 TraesCS2B01G267300 chr3A 90.385 156 7 3 1488 1640 744995332 744995482 1.760000e-46 198.0
72 TraesCS2B01G267300 chr3A 81.203 133 24 1 2468 2599 483447845 483447977 1.100000e-18 106.0
73 TraesCS2B01G267300 chr4D 81.743 241 36 4 2858 3096 370363296 370363062 2.270000e-45 195.0
74 TraesCS2B01G267300 chr4D 85.106 94 14 0 2640 2733 66506240 66506147 6.590000e-16 97.1
75 TraesCS2B01G267300 chr4D 100.000 28 0 0 1809 1836 492442188 492442161 1.400000e-02 52.8
76 TraesCS2B01G267300 chr6D 88.957 163 8 5 1489 1641 129767790 129767628 8.170000e-45 193.0
77 TraesCS2B01G267300 chr6D 89.720 107 10 1 615 721 123784565 123784460 1.400000e-27 135.0
78 TraesCS2B01G267300 chr6D 84.337 83 11 2 2615 2696 67073266 67073185 6.640000e-11 80.5
79 TraesCS2B01G267300 chr6D 100.000 28 0 0 2970 2997 156560480 156560507 1.400000e-02 52.8
80 TraesCS2B01G267300 chr1D 76.579 380 69 14 1845 2219 411110561 411110197 2.940000e-44 191.0
81 TraesCS2B01G267300 chr1D 90.826 109 9 1 614 721 238457017 238457125 2.320000e-30 145.0
82 TraesCS2B01G267300 chr1D 83.916 143 22 1 2947 3089 35087537 35087678 1.400000e-27 135.0
83 TraesCS2B01G267300 chr1D 90.278 72 7 0 2624 2695 365891406 365891477 2.370000e-15 95.3
84 TraesCS2B01G267300 chr1D 100.000 28 0 0 1809 1836 134529882 134529909 1.400000e-02 52.8
85 TraesCS2B01G267300 chr1D 100.000 28 0 0 1809 1836 323229984 323229957 1.400000e-02 52.8
86 TraesCS2B01G267300 chr6A 93.333 105 6 1 617 721 378034697 378034594 3.860000e-33 154.0
87 TraesCS2B01G267300 chr6A 90.476 105 10 0 617 721 542232114 542232010 1.080000e-28 139.0
88 TraesCS2B01G267300 chr6A 91.228 57 5 0 3037 3093 120127617 120127561 2.390000e-10 78.7
89 TraesCS2B01G267300 chr6A 84.416 77 11 1 3017 3093 525186911 525186986 3.090000e-09 75.0
90 TraesCS2B01G267300 chr6A 100.000 28 0 0 1809 1836 240613698 240613725 1.400000e-02 52.8
91 TraesCS2B01G267300 chr3B 95.699 93 4 0 7887 7979 674273849 674273941 4.990000e-32 150.0
92 TraesCS2B01G267300 chr3B 89.655 87 7 2 377 462 29485314 29485229 8.470000e-20 110.0
93 TraesCS2B01G267300 chr1A 74.865 370 74 14 1859 2225 550429078 550428725 4.990000e-32 150.0
94 TraesCS2B01G267300 chr1A 86.441 59 8 0 2968 3026 484876746 484876804 1.860000e-06 65.8
95 TraesCS2B01G267300 chr3D 94.624 93 5 0 7887 7979 580635325 580635417 2.320000e-30 145.0
96 TraesCS2B01G267300 chr3D 88.406 69 8 0 2600 2668 126294216 126294284 5.130000e-12 84.2
97 TraesCS2B01G267300 chr3D 86.301 73 8 2 1687 1758 579363089 579363018 2.390000e-10 78.7
98 TraesCS2B01G267300 chr3D 100.000 28 0 0 1809 1836 251800679 251800652 1.400000e-02 52.8
99 TraesCS2B01G267300 chr4A 80.263 152 29 1 3067 3218 114532976 114532826 6.540000e-21 113.0
100 TraesCS2B01G267300 chr4A 88.372 86 9 1 377 462 572644032 572644116 1.420000e-17 102.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G267300 chr2B 359930686 359938664 7978 False 14735.000 14735 100.000000 1 7979 1 chr2B.!!$F2 7978
1 TraesCS2B01G267300 chr2D 307854044 307861954 7910 True 2039.500 5906 94.169833 1 7890 6 chr2D.!!$R1 7889
2 TraesCS2B01G267300 chr2A 388674495 388685167 10672 True 1375.625 4841 93.978750 1 7825 8 chr2A.!!$R2 7824
3 TraesCS2B01G267300 chr7A 445215251 445216446 1195 True 279.500 331 79.963000 1838 3089 2 chr7A.!!$R4 1251
4 TraesCS2B01G267300 chr7B 583931019 583931611 592 True 305.000 305 76.565000 2600 3212 1 chr7B.!!$R4 612
5 TraesCS2B01G267300 chr4B 455400930 455402100 1170 True 239.000 320 78.385000 1834 3096 2 chr4B.!!$R5 1262
6 TraesCS2B01G267300 chr7D 540627913 540628506 593 True 307.000 307 76.874000 2604 3212 1 chr7D.!!$R4 608
7 TraesCS2B01G267300 chr7D 109585725 109586365 640 True 265.000 265 75.000000 1967 2601 1 chr7D.!!$R2 634
8 TraesCS2B01G267300 chr7D 393027072 393028130 1058 True 224.000 239 81.358500 1839 3096 2 chr7D.!!$R6 1257
9 TraesCS2B01G267300 chr5D 207965259 207965889 630 True 279.000 279 75.730000 2600 3218 1 chr5D.!!$R1 618
10 TraesCS2B01G267300 chr5D 207994350 207994980 630 True 263.000 263 75.269000 2600 3218 1 chr5D.!!$R2 618

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
541 800 0.032678 ATCGCTCAACTCGCCATAGG 59.967 55.000 0.00 0.00 0.00 2.57 F
570 950 0.107268 ACGGTATAATGCGGAACCCC 59.893 55.000 0.00 0.00 0.00 4.95 F
788 1168 0.109132 GGCCTGCATTTTGGAACGAG 60.109 55.000 0.00 0.00 0.00 4.18 F
1498 2040 0.173708 GCTGTGAACTACTCCCTCCG 59.826 60.000 0.00 0.00 0.00 4.63 F
1774 2332 0.460635 TTGCTATCCAACGCGGTACC 60.461 55.000 12.47 0.16 35.57 3.34 F
2606 3621 0.891904 TGATGACGACACCGAGGACA 60.892 55.000 0.00 0.00 39.50 4.02 F
4241 7837 1.283321 AGAGAACCCATGCTCCCTTTC 59.717 52.381 0.00 0.00 0.00 2.62 F
4671 8272 0.755686 TGGTTGGGCGATTTGCTTTT 59.244 45.000 0.00 0.00 45.43 2.27 F
5907 9513 1.067416 GCAGGATATCCGTGCACGA 59.933 57.895 39.10 24.83 43.02 4.35 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1942 2870 0.530744 GTAGGCAGACGGACATGTGA 59.469 55.000 1.15 0.0 0.00 3.58 R
2327 3282 0.748450 CCCGCTCTTCCATTACCGTA 59.252 55.000 0.00 0.0 0.00 4.02 R
2417 3373 1.002624 TTCCGGCGATTTGCTCCTT 60.003 52.632 9.30 0.0 45.43 3.36 R
3113 4675 1.549950 GGGAGCCAACCATCCAAAGAA 60.550 52.381 0.00 0.0 37.33 2.52 R
3548 7107 1.402968 CACCGCTCATTCCATTTCCTG 59.597 52.381 0.00 0.0 0.00 3.86 R
4410 8006 1.774254 TGAGAGGGTTGTGTTGATGGT 59.226 47.619 0.00 0.0 0.00 3.55 R
5907 9513 2.575921 TCTCCCTGATGGTGGAATCT 57.424 50.000 0.00 0.0 34.77 2.40 R
6419 10025 2.632028 AGCTTTCTCTTCAGCTCTCACA 59.368 45.455 0.00 0.0 43.12 3.58 R
7906 11937 0.171231 GGGCAAGCGAATCAAACCTC 59.829 55.000 0.00 0.0 0.00 3.85 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
28 29 3.807538 CCATGCACGCAGCCTCAC 61.808 66.667 0.00 0.00 44.83 3.51
50 51 3.683966 AACGACGCCACACCACCAA 62.684 57.895 0.00 0.00 0.00 3.67
51 52 3.345808 CGACGCCACACCACCAAG 61.346 66.667 0.00 0.00 0.00 3.61
66 67 0.735978 CCAAGCGTATCACTGCGTCA 60.736 55.000 0.00 0.00 35.87 4.35
133 134 2.280797 GAATCCGCCGCAGCCATA 60.281 61.111 0.00 0.00 34.57 2.74
134 135 1.672356 GAATCCGCCGCAGCCATAT 60.672 57.895 0.00 0.00 34.57 1.78
137 138 4.969196 CCGCCGCAGCCATATCGT 62.969 66.667 0.00 0.00 34.57 3.73
139 140 3.406361 GCCGCAGCCATATCGTCG 61.406 66.667 0.00 0.00 0.00 5.12
144 145 2.027605 AGCCATATCGTCGCACCG 59.972 61.111 0.00 0.00 0.00 4.94
316 539 4.602259 CGTCCGCGGGGCATGTAT 62.602 66.667 27.83 0.00 0.00 2.29
333 556 4.600692 TGTATGCATACTTGTAGCGGAT 57.399 40.909 31.35 0.00 34.41 4.18
339 562 5.170748 TGCATACTTGTAGCGGATGATATG 58.829 41.667 0.00 0.00 0.00 1.78
348 571 2.909006 AGCGGATGATATGGTGGAGATT 59.091 45.455 0.00 0.00 0.00 2.40
368 591 1.751351 TGAGTCGAGGTAGGAGCAATG 59.249 52.381 0.00 0.00 0.00 2.82
372 595 3.118956 AGTCGAGGTAGGAGCAATGAAAG 60.119 47.826 0.00 0.00 0.00 2.62
376 599 4.878397 CGAGGTAGGAGCAATGAAAGAAAT 59.122 41.667 0.00 0.00 0.00 2.17
377 600 6.049149 CGAGGTAGGAGCAATGAAAGAAATA 58.951 40.000 0.00 0.00 0.00 1.40
378 601 6.018669 CGAGGTAGGAGCAATGAAAGAAATAC 60.019 42.308 0.00 0.00 0.00 1.89
379 602 6.963322 AGGTAGGAGCAATGAAAGAAATACT 58.037 36.000 0.00 0.00 0.00 2.12
380 603 7.051000 AGGTAGGAGCAATGAAAGAAATACTC 58.949 38.462 0.00 0.00 0.00 2.59
381 604 6.261158 GGTAGGAGCAATGAAAGAAATACTCC 59.739 42.308 0.00 0.00 42.25 3.85
382 605 5.196695 AGGAGCAATGAAAGAAATACTCCC 58.803 41.667 0.00 0.00 42.79 4.30
383 606 5.044550 AGGAGCAATGAAAGAAATACTCCCT 60.045 40.000 0.00 0.00 42.79 4.20
384 607 5.654209 GGAGCAATGAAAGAAATACTCCCTT 59.346 40.000 0.00 0.00 37.15 3.95
385 608 6.183360 GGAGCAATGAAAGAAATACTCCCTTC 60.183 42.308 0.00 0.00 37.15 3.46
386 609 5.355350 AGCAATGAAAGAAATACTCCCTTCG 59.645 40.000 0.00 0.00 0.00 3.79
387 610 5.123979 GCAATGAAAGAAATACTCCCTTCGT 59.876 40.000 0.00 0.00 0.00 3.85
388 611 6.349363 GCAATGAAAGAAATACTCCCTTCGTT 60.349 38.462 0.00 0.00 30.81 3.85
389 612 7.593825 CAATGAAAGAAATACTCCCTTCGTTT 58.406 34.615 0.00 0.00 29.35 3.60
390 613 6.796705 TGAAAGAAATACTCCCTTCGTTTC 57.203 37.500 0.00 0.00 0.00 2.78
391 614 6.292923 TGAAAGAAATACTCCCTTCGTTTCA 58.707 36.000 0.00 0.00 32.53 2.69
392 615 6.768861 TGAAAGAAATACTCCCTTCGTTTCAA 59.231 34.615 0.00 0.00 32.31 2.69
393 616 7.283580 TGAAAGAAATACTCCCTTCGTTTCAAA 59.716 33.333 0.00 0.00 32.31 2.69
394 617 7.576861 AAGAAATACTCCCTTCGTTTCAAAA 57.423 32.000 0.00 0.00 32.66 2.44
395 618 7.761038 AGAAATACTCCCTTCGTTTCAAAAT 57.239 32.000 0.00 0.00 32.66 1.82
396 619 8.857694 AGAAATACTCCCTTCGTTTCAAAATA 57.142 30.769 0.00 0.00 32.66 1.40
397 620 9.292195 AGAAATACTCCCTTCGTTTCAAAATAA 57.708 29.630 0.00 0.00 32.66 1.40
398 621 9.902196 GAAATACTCCCTTCGTTTCAAAATAAA 57.098 29.630 0.00 0.00 0.00 1.40
400 623 9.855021 AATACTCCCTTCGTTTCAAAATAAATG 57.145 29.630 0.00 0.00 0.00 2.32
401 624 7.519032 ACTCCCTTCGTTTCAAAATAAATGA 57.481 32.000 0.00 0.00 33.60 2.57
402 625 7.368059 ACTCCCTTCGTTTCAAAATAAATGAC 58.632 34.615 0.00 0.00 34.83 3.06
403 626 6.683715 TCCCTTCGTTTCAAAATAAATGACC 58.316 36.000 0.00 0.00 34.83 4.02
404 627 5.867174 CCCTTCGTTTCAAAATAAATGACCC 59.133 40.000 0.00 0.00 34.83 4.46
405 628 6.451393 CCTTCGTTTCAAAATAAATGACCCA 58.549 36.000 0.00 0.00 34.83 4.51
406 629 6.926272 CCTTCGTTTCAAAATAAATGACCCAA 59.074 34.615 0.00 0.00 34.83 4.12
407 630 7.095816 CCTTCGTTTCAAAATAAATGACCCAAC 60.096 37.037 0.00 0.00 34.83 3.77
408 631 7.045126 TCGTTTCAAAATAAATGACCCAACT 57.955 32.000 0.00 0.00 31.13 3.16
409 632 7.493367 TCGTTTCAAAATAAATGACCCAACTT 58.507 30.769 0.00 0.00 31.13 2.66
410 633 7.982354 TCGTTTCAAAATAAATGACCCAACTTT 59.018 29.630 0.00 0.00 31.13 2.66
411 634 9.250624 CGTTTCAAAATAAATGACCCAACTTTA 57.749 29.630 0.00 0.00 0.00 1.85
452 675 6.254281 AGTTTGGTCATCTATTTTGGAACG 57.746 37.500 0.00 0.00 0.00 3.95
453 676 6.001460 AGTTTGGTCATCTATTTTGGAACGA 58.999 36.000 0.00 0.00 0.00 3.85
454 677 6.488683 AGTTTGGTCATCTATTTTGGAACGAA 59.511 34.615 0.00 0.00 0.00 3.85
455 678 6.494893 TTGGTCATCTATTTTGGAACGAAG 57.505 37.500 0.00 0.00 0.00 3.79
456 679 4.941263 TGGTCATCTATTTTGGAACGAAGG 59.059 41.667 0.00 0.00 0.00 3.46
457 680 5.183228 GGTCATCTATTTTGGAACGAAGGA 58.817 41.667 0.00 0.00 0.00 3.36
458 681 5.646360 GGTCATCTATTTTGGAACGAAGGAA 59.354 40.000 0.00 0.00 0.00 3.36
459 682 6.183360 GGTCATCTATTTTGGAACGAAGGAAG 60.183 42.308 0.00 0.00 0.00 3.46
460 683 6.371825 GTCATCTATTTTGGAACGAAGGAAGT 59.628 38.462 0.00 0.00 0.00 3.01
461 684 7.548075 GTCATCTATTTTGGAACGAAGGAAGTA 59.452 37.037 0.00 0.00 0.00 2.24
462 685 8.098286 TCATCTATTTTGGAACGAAGGAAGTAA 58.902 33.333 0.00 0.00 0.00 2.24
463 686 7.662604 TCTATTTTGGAACGAAGGAAGTAAC 57.337 36.000 0.00 0.00 0.00 2.50
464 687 7.218614 TCTATTTTGGAACGAAGGAAGTAACA 58.781 34.615 0.00 0.00 0.00 2.41
482 705 7.161829 AGTAACATGCTACGACAAAATATCG 57.838 36.000 0.73 0.00 45.17 2.92
496 719 9.689075 CGACAAAATATCGTGGCTTAATATATG 57.311 33.333 0.00 0.00 34.84 1.78
524 783 3.499918 AGCATGTTATTTAGCGAGGCATC 59.500 43.478 0.00 0.00 0.00 3.91
536 795 3.567797 GGCATCGCTCAACTCGCC 61.568 66.667 0.00 0.00 0.00 5.54
541 800 0.032678 ATCGCTCAACTCGCCATAGG 59.967 55.000 0.00 0.00 0.00 2.57
543 802 1.227674 GCTCAACTCGCCATAGGGG 60.228 63.158 0.00 0.00 40.85 4.79
565 824 3.581755 GCTATTGACGGTATAATGCGGA 58.418 45.455 0.00 0.00 0.00 5.54
566 825 3.991773 GCTATTGACGGTATAATGCGGAA 59.008 43.478 0.00 0.00 0.00 4.30
567 826 4.143179 GCTATTGACGGTATAATGCGGAAC 60.143 45.833 0.00 0.00 0.00 3.62
570 950 0.107268 ACGGTATAATGCGGAACCCC 59.893 55.000 0.00 0.00 0.00 4.95
607 987 4.882427 CCTAACTGTAGAGTGGAGATCGAA 59.118 45.833 0.00 0.00 30.61 3.71
611 991 6.380095 ACTGTAGAGTGGAGATCGAATTAC 57.620 41.667 0.00 0.00 0.00 1.89
615 995 8.459911 TGTAGAGTGGAGATCGAATTACATAA 57.540 34.615 0.00 0.00 0.00 1.90
616 996 9.078990 TGTAGAGTGGAGATCGAATTACATAAT 57.921 33.333 0.00 0.00 0.00 1.28
619 999 9.303116 AGAGTGGAGATCGAATTACATAATACT 57.697 33.333 0.00 0.00 0.00 2.12
620 1000 9.562583 GAGTGGAGATCGAATTACATAATACTC 57.437 37.037 0.00 0.00 0.00 2.59
621 1001 8.524487 AGTGGAGATCGAATTACATAATACTCC 58.476 37.037 0.00 0.00 40.06 3.85
622 1002 7.760340 GTGGAGATCGAATTACATAATACTCCC 59.240 40.741 0.00 0.00 39.25 4.30
623 1003 7.674348 TGGAGATCGAATTACATAATACTCCCT 59.326 37.037 0.00 0.00 39.25 4.20
624 1004 8.192110 GGAGATCGAATTACATAATACTCCCTC 58.808 40.741 0.00 0.00 35.57 4.30
625 1005 8.068892 AGATCGAATTACATAATACTCCCTCC 57.931 38.462 0.00 0.00 0.00 4.30
626 1006 7.674348 AGATCGAATTACATAATACTCCCTCCA 59.326 37.037 0.00 0.00 0.00 3.86
627 1007 7.792364 TCGAATTACATAATACTCCCTCCAT 57.208 36.000 0.00 0.00 0.00 3.41
628 1008 8.202461 TCGAATTACATAATACTCCCTCCATT 57.798 34.615 0.00 0.00 0.00 3.16
629 1009 8.656806 TCGAATTACATAATACTCCCTCCATTT 58.343 33.333 0.00 0.00 0.00 2.32
630 1010 8.936864 CGAATTACATAATACTCCCTCCATTTC 58.063 37.037 0.00 0.00 0.00 2.17
631 1011 9.793259 GAATTACATAATACTCCCTCCATTTCA 57.207 33.333 0.00 0.00 0.00 2.69
634 1014 9.983024 TTACATAATACTCCCTCCATTTCAAAA 57.017 29.630 0.00 0.00 0.00 2.44
641 1021 9.799106 ATACTCCCTCCATTTCAAAATATAGTG 57.201 33.333 0.00 0.00 0.00 2.74
642 1022 7.643123 ACTCCCTCCATTTCAAAATATAGTGT 58.357 34.615 0.00 0.00 0.00 3.55
643 1023 7.557719 ACTCCCTCCATTTCAAAATATAGTGTG 59.442 37.037 0.00 0.00 0.00 3.82
644 1024 6.321181 TCCCTCCATTTCAAAATATAGTGTGC 59.679 38.462 0.00 0.00 0.00 4.57
645 1025 6.461509 CCCTCCATTTCAAAATATAGTGTGCC 60.462 42.308 0.00 0.00 0.00 5.01
646 1026 6.322201 CCTCCATTTCAAAATATAGTGTGCCT 59.678 38.462 0.00 0.00 0.00 4.75
647 1027 7.099266 TCCATTTCAAAATATAGTGTGCCTG 57.901 36.000 0.00 0.00 0.00 4.85
648 1028 5.750067 CCATTTCAAAATATAGTGTGCCTGC 59.250 40.000 0.00 0.00 0.00 4.85
649 1029 4.614555 TTCAAAATATAGTGTGCCTGCG 57.385 40.909 0.00 0.00 0.00 5.18
650 1030 3.605634 TCAAAATATAGTGTGCCTGCGT 58.394 40.909 0.00 0.00 0.00 5.24
651 1031 4.006989 TCAAAATATAGTGTGCCTGCGTT 58.993 39.130 0.00 0.00 0.00 4.84
652 1032 4.457603 TCAAAATATAGTGTGCCTGCGTTT 59.542 37.500 0.00 0.00 0.00 3.60
653 1033 5.048364 TCAAAATATAGTGTGCCTGCGTTTT 60.048 36.000 0.00 0.00 0.00 2.43
654 1034 5.385509 AAATATAGTGTGCCTGCGTTTTT 57.614 34.783 0.00 0.00 0.00 1.94
692 1072 9.834628 TTTGATCATAAATTTAACCAACGAGAC 57.165 29.630 1.21 0.00 0.00 3.36
693 1073 7.981142 TGATCATAAATTTAACCAACGAGACC 58.019 34.615 1.21 0.00 0.00 3.85
694 1074 6.411630 TCATAAATTTAACCAACGAGACCG 57.588 37.500 1.21 0.00 42.50 4.79
695 1075 6.164876 TCATAAATTTAACCAACGAGACCGA 58.835 36.000 1.21 0.00 39.50 4.69
696 1076 6.819649 TCATAAATTTAACCAACGAGACCGAT 59.180 34.615 1.21 0.00 39.50 4.18
697 1077 5.952526 AAATTTAACCAACGAGACCGATT 57.047 34.783 0.00 0.00 39.50 3.34
698 1078 4.939509 ATTTAACCAACGAGACCGATTG 57.060 40.909 0.00 0.00 39.50 2.67
699 1079 1.717194 TAACCAACGAGACCGATTGC 58.283 50.000 0.00 0.00 39.50 3.56
700 1080 1.289109 AACCAACGAGACCGATTGCG 61.289 55.000 0.00 0.00 39.50 4.85
710 1090 3.889227 CGATTGCGGCAGGAGAAA 58.111 55.556 1.67 0.00 0.00 2.52
711 1091 2.170738 CGATTGCGGCAGGAGAAAA 58.829 52.632 1.67 0.00 0.00 2.29
712 1092 0.521291 CGATTGCGGCAGGAGAAAAA 59.479 50.000 1.67 0.00 0.00 1.94
743 1123 9.923143 ATATCTCGTCGGTTAAATTTATGATCA 57.077 29.630 0.00 0.00 0.00 2.92
744 1124 8.657074 ATCTCGTCGGTTAAATTTATGATCAA 57.343 30.769 0.00 0.00 0.00 2.57
745 1125 8.481974 TCTCGTCGGTTAAATTTATGATCAAA 57.518 30.769 0.00 0.00 0.00 2.69
746 1126 8.937884 TCTCGTCGGTTAAATTTATGATCAAAA 58.062 29.630 0.00 2.57 0.00 2.44
747 1127 9.716507 CTCGTCGGTTAAATTTATGATCAAAAT 57.283 29.630 0.00 4.89 0.00 1.82
760 1140 9.958234 TTTATGATCAAAATTGAAACACGAGAA 57.042 25.926 0.00 0.00 41.13 2.87
763 1143 9.778993 ATGATCAAAATTGAAACACGAGAATAG 57.221 29.630 0.00 0.00 41.13 1.73
764 1144 8.998377 TGATCAAAATTGAAACACGAGAATAGA 58.002 29.630 0.00 0.00 41.13 1.98
765 1145 9.483062 GATCAAAATTGAAACACGAGAATAGAG 57.517 33.333 0.00 0.00 41.13 2.43
766 1146 7.806690 TCAAAATTGAAACACGAGAATAGAGG 58.193 34.615 0.00 0.00 33.55 3.69
767 1147 7.659799 TCAAAATTGAAACACGAGAATAGAGGA 59.340 33.333 0.00 0.00 33.55 3.71
768 1148 7.979444 AAATTGAAACACGAGAATAGAGGAA 57.021 32.000 0.00 0.00 0.00 3.36
769 1149 7.602517 AATTGAAACACGAGAATAGAGGAAG 57.397 36.000 0.00 0.00 0.00 3.46
770 1150 5.073311 TGAAACACGAGAATAGAGGAAGG 57.927 43.478 0.00 0.00 0.00 3.46
771 1151 3.528597 AACACGAGAATAGAGGAAGGC 57.471 47.619 0.00 0.00 0.00 4.35
772 1152 1.757699 ACACGAGAATAGAGGAAGGCC 59.242 52.381 0.00 0.00 0.00 5.19
782 1162 2.674958 AGGAAGGCCTGCATTTTGG 58.325 52.632 14.44 0.00 44.90 3.28
783 1163 0.114954 AGGAAGGCCTGCATTTTGGA 59.885 50.000 14.44 0.00 44.90 3.53
784 1164 0.975887 GGAAGGCCTGCATTTTGGAA 59.024 50.000 14.44 0.00 0.00 3.53
785 1165 1.338105 GGAAGGCCTGCATTTTGGAAC 60.338 52.381 14.44 0.00 0.00 3.62
786 1166 0.318120 AAGGCCTGCATTTTGGAACG 59.682 50.000 5.69 0.00 0.00 3.95
787 1167 0.539438 AGGCCTGCATTTTGGAACGA 60.539 50.000 3.11 0.00 0.00 3.85
788 1168 0.109132 GGCCTGCATTTTGGAACGAG 60.109 55.000 0.00 0.00 0.00 4.18
789 1169 0.598065 GCCTGCATTTTGGAACGAGT 59.402 50.000 0.00 0.00 0.00 4.18
790 1170 1.666888 GCCTGCATTTTGGAACGAGTG 60.667 52.381 0.00 0.00 0.00 3.51
791 1171 1.879380 CCTGCATTTTGGAACGAGTGA 59.121 47.619 0.00 0.00 0.00 3.41
804 1184 3.705043 ACGAGTGAGTACGTTTTCTGT 57.295 42.857 0.00 0.00 39.75 3.41
805 1185 4.037858 ACGAGTGAGTACGTTTTCTGTT 57.962 40.909 0.00 0.00 39.75 3.16
806 1186 4.427312 ACGAGTGAGTACGTTTTCTGTTT 58.573 39.130 0.00 0.00 39.75 2.83
807 1187 4.501921 ACGAGTGAGTACGTTTTCTGTTTC 59.498 41.667 0.00 0.00 39.75 2.78
808 1188 4.738740 CGAGTGAGTACGTTTTCTGTTTCT 59.261 41.667 0.00 0.00 0.00 2.52
809 1189 5.331607 CGAGTGAGTACGTTTTCTGTTTCTG 60.332 44.000 0.00 0.00 0.00 3.02
810 1190 4.270325 AGTGAGTACGTTTTCTGTTTCTGC 59.730 41.667 0.00 0.00 0.00 4.26
811 1191 4.270325 GTGAGTACGTTTTCTGTTTCTGCT 59.730 41.667 0.00 0.00 0.00 4.24
831 1211 6.908820 TCTGCTAGTCGTACACGTAAATAATG 59.091 38.462 1.19 0.00 40.80 1.90
975 1358 2.260481 GTTCGTTCGATCCTCTTCCAC 58.740 52.381 0.00 0.00 0.00 4.02
976 1359 0.815734 TCGTTCGATCCTCTTCCACC 59.184 55.000 0.00 0.00 0.00 4.61
1044 1429 0.880278 GCAGCACGGTGAGTTCTTCA 60.880 55.000 13.29 0.00 0.00 3.02
1228 1613 4.527583 GCGGCAGCTCTCCTCCAG 62.528 72.222 0.00 0.00 41.01 3.86
1262 1647 1.228920 TCCTCCAGGGCCCTCTCTTA 61.229 60.000 25.77 4.69 35.41 2.10
1283 1668 7.082602 TCTTAAAGCGATCCGATACAGTAATC 58.917 38.462 0.00 0.00 0.00 1.75
1315 1701 6.041523 CCCCCTTTCATTTCACACTTTCTTAA 59.958 38.462 0.00 0.00 0.00 1.85
1354 1746 7.435305 GTTCTGGTCTACTAAATCCATACCTC 58.565 42.308 0.00 0.00 0.00 3.85
1490 2032 6.140786 TCGTCGATATTATGCTGTGAACTAC 58.859 40.000 0.00 0.00 0.00 2.73
1491 2033 6.017357 TCGTCGATATTATGCTGTGAACTACT 60.017 38.462 0.00 0.00 0.00 2.57
1492 2034 6.303496 CGTCGATATTATGCTGTGAACTACTC 59.697 42.308 0.00 0.00 0.00 2.59
1493 2035 6.583050 GTCGATATTATGCTGTGAACTACTCC 59.417 42.308 0.00 0.00 0.00 3.85
1494 2036 5.864474 CGATATTATGCTGTGAACTACTCCC 59.136 44.000 0.00 0.00 0.00 4.30
1495 2037 6.294787 CGATATTATGCTGTGAACTACTCCCT 60.295 42.308 0.00 0.00 0.00 4.20
1496 2038 4.737855 TTATGCTGTGAACTACTCCCTC 57.262 45.455 0.00 0.00 0.00 4.30
1497 2039 1.267121 TGCTGTGAACTACTCCCTCC 58.733 55.000 0.00 0.00 0.00 4.30
1498 2040 0.173708 GCTGTGAACTACTCCCTCCG 59.826 60.000 0.00 0.00 0.00 4.63
1499 2041 1.546961 CTGTGAACTACTCCCTCCGT 58.453 55.000 0.00 0.00 0.00 4.69
1500 2042 1.893801 CTGTGAACTACTCCCTCCGTT 59.106 52.381 0.00 0.00 0.00 4.44
1501 2043 1.891150 TGTGAACTACTCCCTCCGTTC 59.109 52.381 0.00 0.00 37.02 3.95
1502 2044 1.204231 GTGAACTACTCCCTCCGTTCC 59.796 57.143 0.00 0.00 35.97 3.62
1503 2045 1.076677 TGAACTACTCCCTCCGTTCCT 59.923 52.381 0.00 0.00 35.97 3.36
1504 2046 2.309755 TGAACTACTCCCTCCGTTCCTA 59.690 50.000 0.00 0.00 35.97 2.94
1505 2047 3.245371 TGAACTACTCCCTCCGTTCCTAA 60.245 47.826 0.00 0.00 35.97 2.69
1506 2048 3.463048 ACTACTCCCTCCGTTCCTAAA 57.537 47.619 0.00 0.00 0.00 1.85
1507 2049 3.991683 ACTACTCCCTCCGTTCCTAAAT 58.008 45.455 0.00 0.00 0.00 1.40
1508 2050 5.134725 ACTACTCCCTCCGTTCCTAAATA 57.865 43.478 0.00 0.00 0.00 1.40
1509 2051 5.713807 ACTACTCCCTCCGTTCCTAAATAT 58.286 41.667 0.00 0.00 0.00 1.28
1510 2052 5.774184 ACTACTCCCTCCGTTCCTAAATATC 59.226 44.000 0.00 0.00 0.00 1.63
1511 2053 4.817286 ACTCCCTCCGTTCCTAAATATCT 58.183 43.478 0.00 0.00 0.00 1.98
1512 2054 4.589374 ACTCCCTCCGTTCCTAAATATCTG 59.411 45.833 0.00 0.00 0.00 2.90
1513 2055 4.553678 TCCCTCCGTTCCTAAATATCTGT 58.446 43.478 0.00 0.00 0.00 3.41
1514 2056 4.587684 TCCCTCCGTTCCTAAATATCTGTC 59.412 45.833 0.00 0.00 0.00 3.51
1515 2057 4.589374 CCCTCCGTTCCTAAATATCTGTCT 59.411 45.833 0.00 0.00 0.00 3.41
1516 2058 5.070580 CCCTCCGTTCCTAAATATCTGTCTT 59.929 44.000 0.00 0.00 0.00 3.01
1517 2059 6.408206 CCCTCCGTTCCTAAATATCTGTCTTT 60.408 42.308 0.00 0.00 0.00 2.52
1518 2060 7.048512 CCTCCGTTCCTAAATATCTGTCTTTT 58.951 38.462 0.00 0.00 0.00 2.27
1519 2061 7.553044 CCTCCGTTCCTAAATATCTGTCTTTTT 59.447 37.037 0.00 0.00 0.00 1.94
1520 2062 9.595823 CTCCGTTCCTAAATATCTGTCTTTTTA 57.404 33.333 0.00 0.00 0.00 1.52
1521 2063 9.595823 TCCGTTCCTAAATATCTGTCTTTTTAG 57.404 33.333 0.00 0.00 33.47 1.85
1522 2064 9.595823 CCGTTCCTAAATATCTGTCTTTTTAGA 57.404 33.333 0.00 0.00 34.90 2.10
1535 2077 9.573166 TCTGTCTTTTTAGAGATTTCAAATGGA 57.427 29.630 0.00 0.00 0.00 3.41
1536 2078 9.617975 CTGTCTTTTTAGAGATTTCAAATGGAC 57.382 33.333 0.00 0.00 0.00 4.02
1537 2079 9.354673 TGTCTTTTTAGAGATTTCAAATGGACT 57.645 29.630 0.00 0.00 0.00 3.85
1543 2085 9.739276 TTTAGAGATTTCAAATGGACTACATGT 57.261 29.630 2.69 2.69 40.44 3.21
1551 2093 9.952030 TTTCAAATGGACTACATGTATAAGACA 57.048 29.630 5.91 2.84 43.97 3.41
1581 2123 9.547753 TTTAGATTGTAGATTTACTCATGCTCC 57.452 33.333 0.00 0.00 0.00 4.70
1582 2124 6.219473 AGATTGTAGATTTACTCATGCTCCG 58.781 40.000 0.00 0.00 0.00 4.63
1583 2125 5.339008 TTGTAGATTTACTCATGCTCCGT 57.661 39.130 0.00 0.00 0.00 4.69
1584 2126 6.459670 TTGTAGATTTACTCATGCTCCGTA 57.540 37.500 0.00 0.00 0.00 4.02
1585 2127 6.650427 TGTAGATTTACTCATGCTCCGTAT 57.350 37.500 0.00 0.00 0.00 3.06
1586 2128 6.447162 TGTAGATTTACTCATGCTCCGTATG 58.553 40.000 0.00 0.00 0.00 2.39
1587 2129 5.537300 AGATTTACTCATGCTCCGTATGT 57.463 39.130 0.00 0.00 0.00 2.29
1588 2130 6.650427 AGATTTACTCATGCTCCGTATGTA 57.350 37.500 0.00 0.00 0.00 2.29
1589 2131 6.682746 AGATTTACTCATGCTCCGTATGTAG 58.317 40.000 0.00 0.00 0.00 2.74
1590 2132 5.847111 TTTACTCATGCTCCGTATGTAGT 57.153 39.130 0.00 0.00 0.00 2.73
1591 2133 3.992260 ACTCATGCTCCGTATGTAGTC 57.008 47.619 0.00 0.00 0.00 2.59
1592 2134 3.288092 ACTCATGCTCCGTATGTAGTCA 58.712 45.455 0.00 0.00 0.00 3.41
1593 2135 3.066900 ACTCATGCTCCGTATGTAGTCAC 59.933 47.826 0.00 0.00 0.00 3.67
1594 2136 3.288092 TCATGCTCCGTATGTAGTCACT 58.712 45.455 0.00 0.00 0.00 3.41
1595 2137 3.699538 TCATGCTCCGTATGTAGTCACTT 59.300 43.478 0.00 0.00 0.00 3.16
1596 2138 3.503827 TGCTCCGTATGTAGTCACTTG 57.496 47.619 0.00 0.00 0.00 3.16
1597 2139 2.823747 TGCTCCGTATGTAGTCACTTGT 59.176 45.455 0.00 0.00 0.00 3.16
1598 2140 3.257375 TGCTCCGTATGTAGTCACTTGTT 59.743 43.478 0.00 0.00 0.00 2.83
1599 2141 3.612860 GCTCCGTATGTAGTCACTTGTTG 59.387 47.826 0.00 0.00 0.00 3.33
1600 2142 4.617530 GCTCCGTATGTAGTCACTTGTTGA 60.618 45.833 0.00 0.00 0.00 3.18
1601 2143 5.456548 TCCGTATGTAGTCACTTGTTGAA 57.543 39.130 0.00 0.00 35.39 2.69
1602 2144 5.845103 TCCGTATGTAGTCACTTGTTGAAA 58.155 37.500 0.00 0.00 35.39 2.69
1603 2145 6.460781 TCCGTATGTAGTCACTTGTTGAAAT 58.539 36.000 0.00 0.00 35.39 2.17
1604 2146 6.588756 TCCGTATGTAGTCACTTGTTGAAATC 59.411 38.462 0.00 0.00 35.39 2.17
1605 2147 6.590292 CCGTATGTAGTCACTTGTTGAAATCT 59.410 38.462 0.00 0.00 35.39 2.40
1606 2148 7.201444 CCGTATGTAGTCACTTGTTGAAATCTC 60.201 40.741 0.00 0.00 35.39 2.75
1607 2149 7.542477 CGTATGTAGTCACTTGTTGAAATCTCT 59.458 37.037 0.00 0.00 35.39 3.10
1608 2150 9.856488 GTATGTAGTCACTTGTTGAAATCTCTA 57.144 33.333 0.00 0.00 35.39 2.43
1609 2151 8.994429 ATGTAGTCACTTGTTGAAATCTCTAG 57.006 34.615 0.00 0.00 35.39 2.43
1610 2152 8.178313 TGTAGTCACTTGTTGAAATCTCTAGA 57.822 34.615 0.00 0.00 35.39 2.43
1611 2153 8.638873 TGTAGTCACTTGTTGAAATCTCTAGAA 58.361 33.333 0.00 0.00 35.39 2.10
1612 2154 9.477484 GTAGTCACTTGTTGAAATCTCTAGAAA 57.523 33.333 0.00 0.00 35.39 2.52
1613 2155 8.600449 AGTCACTTGTTGAAATCTCTAGAAAG 57.400 34.615 0.00 0.00 35.39 2.62
1614 2156 8.424918 AGTCACTTGTTGAAATCTCTAGAAAGA 58.575 33.333 0.00 0.00 35.39 2.52
1615 2157 8.491950 GTCACTTGTTGAAATCTCTAGAAAGAC 58.508 37.037 0.00 0.00 35.39 3.01
1616 2158 8.204160 TCACTTGTTGAAATCTCTAGAAAGACA 58.796 33.333 0.00 0.00 0.00 3.41
1617 2159 8.830580 CACTTGTTGAAATCTCTAGAAAGACAA 58.169 33.333 0.00 0.00 0.00 3.18
1618 2160 9.396022 ACTTGTTGAAATCTCTAGAAAGACAAA 57.604 29.630 0.00 0.00 0.00 2.83
1636 2178 9.807921 AAAGACAAATATTTAGAAACAGAGGGA 57.192 29.630 0.00 0.00 0.00 4.20
1637 2179 9.454859 AAGACAAATATTTAGAAACAGAGGGAG 57.545 33.333 0.00 0.00 0.00 4.30
1638 2180 8.606830 AGACAAATATTTAGAAACAGAGGGAGT 58.393 33.333 0.00 0.00 0.00 3.85
1639 2181 9.886132 GACAAATATTTAGAAACAGAGGGAGTA 57.114 33.333 0.00 0.00 0.00 2.59
1666 2208 4.997905 TTTCGTCTCTCAAGCATGAAAG 57.002 40.909 0.00 0.00 34.49 2.62
1716 2258 1.873591 CTCCAACGTGGACCTTCAAAG 59.126 52.381 0.00 0.00 42.67 2.77
1773 2331 1.361793 TTTGCTATCCAACGCGGTAC 58.638 50.000 12.47 0.00 35.57 3.34
1774 2332 0.460635 TTGCTATCCAACGCGGTACC 60.461 55.000 12.47 0.16 35.57 3.34
1870 2798 5.001237 TCTCTCCGCATTTAAACGACATA 57.999 39.130 0.00 0.00 0.00 2.29
1947 2875 1.740380 GCCTACATGCGAGTGTCACAT 60.740 52.381 5.62 0.00 33.62 3.21
2138 3069 1.371183 CAGCCTCTCCGGTGAACAA 59.629 57.895 7.75 0.00 34.25 2.83
2327 3282 2.671177 GCGTGCGCACTTCACTGAT 61.671 57.895 35.27 0.00 41.49 2.90
2417 3373 3.440415 ATGAGCACCGACTCGCGA 61.440 61.111 9.26 9.26 44.57 5.87
2566 3536 6.944862 AGAAAGAAGCTATGTTTGTGGAGATT 59.055 34.615 0.00 0.00 0.00 2.40
2606 3621 0.891904 TGATGACGACACCGAGGACA 60.892 55.000 0.00 0.00 39.50 4.02
2733 3795 3.884774 AACCGGTGAGCTTGCCCA 61.885 61.111 8.52 0.00 0.00 5.36
3015 4569 4.760530 ATGTATGTGCTCCAGCTTAGAA 57.239 40.909 0.00 0.00 42.66 2.10
3037 4591 6.261826 AGAAGAAAATCATCCGGCTTTATCTG 59.738 38.462 0.00 0.00 0.00 2.90
3076 4630 5.890334 TGAATGAAAGTTGTCCAGTTTGTC 58.110 37.500 0.00 0.00 0.00 3.18
3260 4822 4.179298 GCAAATTCTCATTCAAGGGAAGC 58.821 43.478 0.00 0.00 36.25 3.86
3383 6941 8.513774 GTTAATGTTCGTTCCCTTTATGGTTTA 58.486 33.333 0.00 0.00 0.00 2.01
3642 7201 6.972901 GGAAGTTACACACTCCTTTTCTTTTG 59.027 38.462 0.00 0.00 32.94 2.44
3943 7502 7.686434 TGGAGTAGCTCTAGGTTATTTTGTTT 58.314 34.615 0.00 0.00 0.00 2.83
4241 7837 1.283321 AGAGAACCCATGCTCCCTTTC 59.717 52.381 0.00 0.00 0.00 2.62
4410 8006 1.770061 TGGCTCCATGCACTATCATCA 59.230 47.619 0.00 0.00 45.15 3.07
4432 8032 3.181429 ACCATCAACACAACCCTCTCATT 60.181 43.478 0.00 0.00 0.00 2.57
4671 8272 0.755686 TGGTTGGGCGATTTGCTTTT 59.244 45.000 0.00 0.00 45.43 2.27
4672 8273 1.147473 GGTTGGGCGATTTGCTTTTG 58.853 50.000 0.00 0.00 45.43 2.44
4673 8274 1.540146 GGTTGGGCGATTTGCTTTTGT 60.540 47.619 0.00 0.00 45.43 2.83
4793 8394 1.202830 TGCCCACTTGTCCAACGTTAT 60.203 47.619 0.00 0.00 0.00 1.89
4863 8464 4.987285 ACTCGTGAAATATCTGCTGCATAG 59.013 41.667 1.31 0.00 0.00 2.23
4913 8514 2.231964 CTGGCTAAAGGCTTGCATTTGA 59.768 45.455 14.29 0.27 41.69 2.69
4914 8515 2.029110 TGGCTAAAGGCTTGCATTTGAC 60.029 45.455 14.29 7.91 41.69 3.18
5435 9040 8.695456 TGATGTAGTTGATCTGCTATTCACTTA 58.305 33.333 0.00 0.00 0.00 2.24
5443 9048 9.755804 TTGATCTGCTATTCACTTATTAGACTG 57.244 33.333 0.00 0.00 0.00 3.51
5459 9064 4.009370 AGACTGTGCTTCCTCCTAAAAC 57.991 45.455 0.00 0.00 0.00 2.43
5658 9264 7.654923 TGAGATGTAACTAGCAATCATGTGATC 59.345 37.037 0.00 0.00 32.75 2.92
5661 9267 3.117491 ACTAGCAATCATGTGATCCGG 57.883 47.619 0.00 0.00 32.75 5.14
5907 9513 1.067416 GCAGGATATCCGTGCACGA 59.933 57.895 39.10 24.83 43.02 4.35
6374 9980 1.514553 TCAGATGTGGCGCTCTGAG 59.485 57.895 19.68 0.00 42.17 3.35
6419 10025 4.320788 GCTGTCATTTTAGAAGCAGCTGTT 60.321 41.667 16.64 6.37 43.94 3.16
6711 10318 1.345741 TGTGAGGAAAGGTCAGAGCTG 59.654 52.381 1.99 0.00 0.00 4.24
6729 10336 2.746362 GCTGTGCTCTACTTCAAAGCAT 59.254 45.455 0.00 0.00 46.73 3.79
6852 10459 0.392327 TACGTACGATCGGGGACACA 60.392 55.000 24.41 2.28 34.94 3.72
7210 10817 6.490241 ACACCTACTGTTGTAAGGTTAGTT 57.510 37.500 0.00 0.00 32.09 2.24
7213 10820 8.485392 ACACCTACTGTTGTAAGGTTAGTTTTA 58.515 33.333 0.00 0.00 32.09 1.52
7408 11189 3.366374 CGAAGCTCAAATCCCTGAAAACC 60.366 47.826 0.00 0.00 0.00 3.27
7427 11208 3.412386 ACCAGGTAGTTCAGTTTGCATC 58.588 45.455 0.00 0.00 0.00 3.91
7433 11214 3.498774 AGTTCAGTTTGCATCTCCTGT 57.501 42.857 0.00 0.00 0.00 4.00
7482 11264 2.757099 CCTTGCCTCCCACATGCC 60.757 66.667 0.00 0.00 0.00 4.40
7561 11574 4.976731 GCTAGTAACATACCATCACGACAG 59.023 45.833 0.00 0.00 0.00 3.51
7564 11577 1.195115 ACATACCATCACGACAGGCT 58.805 50.000 0.00 0.00 0.00 4.58
7571 11584 3.126831 CCATCACGACAGGCTAGAATTC 58.873 50.000 0.00 0.00 0.00 2.17
7600 11613 3.057526 TCAGCGGATCAGTAATACCATCG 60.058 47.826 0.00 0.00 0.00 3.84
7699 11730 0.548031 GATCTTGATCCACCCTGGCA 59.452 55.000 0.00 0.00 37.47 4.92
7787 11818 4.701651 TCGAACAATTTCAGCAATGAGGAT 59.298 37.500 0.00 0.00 0.00 3.24
7788 11819 5.032863 CGAACAATTTCAGCAATGAGGATC 58.967 41.667 0.00 0.00 0.00 3.36
7890 11921 1.952296 CCAGAATTGCTGCTGTATCCC 59.048 52.381 0.00 0.00 43.50 3.85
7891 11922 1.600957 CAGAATTGCTGCTGTATCCCG 59.399 52.381 0.00 0.00 37.90 5.14
7892 11923 1.486310 AGAATTGCTGCTGTATCCCGA 59.514 47.619 0.00 0.00 0.00 5.14
7893 11924 2.092968 AGAATTGCTGCTGTATCCCGAA 60.093 45.455 0.00 0.00 0.00 4.30
7894 11925 1.959042 ATTGCTGCTGTATCCCGAAG 58.041 50.000 0.00 0.00 0.00 3.79
7907 11938 3.604629 CGAAGGAGCGGAGGAAGA 58.395 61.111 0.00 0.00 0.00 2.87
7908 11939 1.435515 CGAAGGAGCGGAGGAAGAG 59.564 63.158 0.00 0.00 0.00 2.85
7909 11940 1.819905 GAAGGAGCGGAGGAAGAGG 59.180 63.158 0.00 0.00 0.00 3.69
7910 11941 0.973496 GAAGGAGCGGAGGAAGAGGT 60.973 60.000 0.00 0.00 0.00 3.85
7911 11942 0.545548 AAGGAGCGGAGGAAGAGGTT 60.546 55.000 0.00 0.00 0.00 3.50
7912 11943 0.545548 AGGAGCGGAGGAAGAGGTTT 60.546 55.000 0.00 0.00 0.00 3.27
7913 11944 0.391793 GGAGCGGAGGAAGAGGTTTG 60.392 60.000 0.00 0.00 0.00 2.93
7914 11945 0.608640 GAGCGGAGGAAGAGGTTTGA 59.391 55.000 0.00 0.00 0.00 2.69
7915 11946 1.208293 GAGCGGAGGAAGAGGTTTGAT 59.792 52.381 0.00 0.00 0.00 2.57
7916 11947 1.630878 AGCGGAGGAAGAGGTTTGATT 59.369 47.619 0.00 0.00 0.00 2.57
7917 11948 2.010497 GCGGAGGAAGAGGTTTGATTC 58.990 52.381 0.00 0.00 0.00 2.52
7918 11949 2.271800 CGGAGGAAGAGGTTTGATTCG 58.728 52.381 0.00 0.00 0.00 3.34
7919 11950 2.010497 GGAGGAAGAGGTTTGATTCGC 58.990 52.381 0.00 0.00 0.00 4.70
7920 11951 2.355209 GGAGGAAGAGGTTTGATTCGCT 60.355 50.000 0.00 0.00 0.00 4.93
7921 11952 3.339141 GAGGAAGAGGTTTGATTCGCTT 58.661 45.455 0.00 0.00 0.00 4.68
7922 11953 3.077359 AGGAAGAGGTTTGATTCGCTTG 58.923 45.455 0.00 0.00 0.00 4.01
7923 11954 2.414691 GGAAGAGGTTTGATTCGCTTGC 60.415 50.000 0.00 0.00 0.00 4.01
7924 11955 1.168714 AGAGGTTTGATTCGCTTGCC 58.831 50.000 0.00 0.00 0.00 4.52
7925 11956 0.171231 GAGGTTTGATTCGCTTGCCC 59.829 55.000 0.00 0.00 0.00 5.36
7926 11957 0.251341 AGGTTTGATTCGCTTGCCCT 60.251 50.000 0.00 0.00 0.00 5.19
7927 11958 0.171231 GGTTTGATTCGCTTGCCCTC 59.829 55.000 0.00 0.00 0.00 4.30
7928 11959 0.171231 GTTTGATTCGCTTGCCCTCC 59.829 55.000 0.00 0.00 0.00 4.30
7929 11960 0.038166 TTTGATTCGCTTGCCCTCCT 59.962 50.000 0.00 0.00 0.00 3.69
7930 11961 0.392998 TTGATTCGCTTGCCCTCCTC 60.393 55.000 0.00 0.00 0.00 3.71
7931 11962 1.221840 GATTCGCTTGCCCTCCTCA 59.778 57.895 0.00 0.00 0.00 3.86
7932 11963 0.179034 GATTCGCTTGCCCTCCTCAT 60.179 55.000 0.00 0.00 0.00 2.90
7933 11964 0.179034 ATTCGCTTGCCCTCCTCATC 60.179 55.000 0.00 0.00 0.00 2.92
7934 11965 2.578163 TTCGCTTGCCCTCCTCATCG 62.578 60.000 0.00 0.00 0.00 3.84
7935 11966 2.586792 GCTTGCCCTCCTCATCGT 59.413 61.111 0.00 0.00 0.00 3.73
7936 11967 1.522580 GCTTGCCCTCCTCATCGTC 60.523 63.158 0.00 0.00 0.00 4.20
7937 11968 1.965754 GCTTGCCCTCCTCATCGTCT 61.966 60.000 0.00 0.00 0.00 4.18
7938 11969 1.403814 CTTGCCCTCCTCATCGTCTA 58.596 55.000 0.00 0.00 0.00 2.59
7939 11970 1.339610 CTTGCCCTCCTCATCGTCTAG 59.660 57.143 0.00 0.00 0.00 2.43
7940 11971 0.551396 TGCCCTCCTCATCGTCTAGA 59.449 55.000 0.00 0.00 0.00 2.43
7941 11972 1.145945 TGCCCTCCTCATCGTCTAGAT 59.854 52.381 0.00 0.00 41.01 1.98
7953 11984 4.100279 TCGTCTAGATGCTATGAAGGGA 57.900 45.455 7.11 0.00 0.00 4.20
7954 11985 4.075682 TCGTCTAGATGCTATGAAGGGAG 58.924 47.826 7.11 0.00 0.00 4.30
7955 11986 3.366883 CGTCTAGATGCTATGAAGGGAGC 60.367 52.174 0.00 0.00 39.25 4.70
7956 11987 2.822561 TCTAGATGCTATGAAGGGAGCG 59.177 50.000 0.00 0.00 41.83 5.03
7957 11988 1.418334 AGATGCTATGAAGGGAGCGT 58.582 50.000 0.00 0.00 41.83 5.07
7958 11989 2.598565 AGATGCTATGAAGGGAGCGTA 58.401 47.619 0.00 0.00 41.83 4.42
7959 11990 2.965831 AGATGCTATGAAGGGAGCGTAA 59.034 45.455 0.00 0.00 41.83 3.18
7960 11991 3.580458 AGATGCTATGAAGGGAGCGTAAT 59.420 43.478 0.00 0.00 41.83 1.89
7961 11992 4.772624 AGATGCTATGAAGGGAGCGTAATA 59.227 41.667 0.00 0.00 41.83 0.98
7962 11993 4.521130 TGCTATGAAGGGAGCGTAATAG 57.479 45.455 0.00 0.00 41.83 1.73
7963 11994 3.895656 TGCTATGAAGGGAGCGTAATAGT 59.104 43.478 0.00 0.00 41.83 2.12
7964 11995 4.022242 TGCTATGAAGGGAGCGTAATAGTC 60.022 45.833 0.00 0.00 41.83 2.59
7965 11996 3.644884 ATGAAGGGAGCGTAATAGTCG 57.355 47.619 0.00 0.00 0.00 4.18
7966 11997 2.372264 TGAAGGGAGCGTAATAGTCGT 58.628 47.619 0.00 0.00 0.00 4.34
7967 11998 2.098607 TGAAGGGAGCGTAATAGTCGTG 59.901 50.000 0.00 0.00 0.00 4.35
7968 11999 1.760192 AGGGAGCGTAATAGTCGTGT 58.240 50.000 0.00 0.00 0.00 4.49
7969 12000 1.674962 AGGGAGCGTAATAGTCGTGTC 59.325 52.381 0.00 0.00 0.00 3.67
7970 12001 1.674962 GGGAGCGTAATAGTCGTGTCT 59.325 52.381 0.00 0.00 0.00 3.41
7971 12002 2.098770 GGGAGCGTAATAGTCGTGTCTT 59.901 50.000 0.00 0.00 0.00 3.01
7972 12003 3.361414 GGAGCGTAATAGTCGTGTCTTC 58.639 50.000 0.00 0.00 0.00 2.87
7973 12004 3.027710 GAGCGTAATAGTCGTGTCTTCG 58.972 50.000 0.00 0.00 0.00 3.79
7974 12005 2.674852 AGCGTAATAGTCGTGTCTTCGA 59.325 45.455 0.00 0.00 37.51 3.71
7975 12006 3.027710 GCGTAATAGTCGTGTCTTCGAG 58.972 50.000 0.00 0.00 40.52 4.04
7976 12007 3.027710 CGTAATAGTCGTGTCTTCGAGC 58.972 50.000 0.00 0.00 40.52 5.03
7977 12008 2.175530 AATAGTCGTGTCTTCGAGCG 57.824 50.000 0.00 0.00 40.52 5.03
7978 12009 0.377554 ATAGTCGTGTCTTCGAGCGG 59.622 55.000 0.00 0.00 40.52 5.52
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
133 134 0.318699 CACATATCCGGTGCGACGAT 60.319 55.000 0.00 0.00 35.47 3.73
134 135 1.065109 CACATATCCGGTGCGACGA 59.935 57.895 0.00 0.00 35.47 4.20
193 196 1.228657 GGCGAAAACCGAGCAGACTT 61.229 55.000 0.00 0.00 41.76 3.01
196 199 0.605319 ATTGGCGAAAACCGAGCAGA 60.605 50.000 0.00 0.00 41.76 4.26
232 451 4.424711 GAGGCAACCCCATCGGCA 62.425 66.667 0.00 0.00 35.39 5.69
279 499 0.476808 ACATACACCCTCACCCCCAA 60.477 55.000 0.00 0.00 0.00 4.12
316 539 3.751479 ATCATCCGCTACAAGTATGCA 57.249 42.857 0.00 0.00 0.00 3.96
322 545 3.006859 TCCACCATATCATCCGCTACAAG 59.993 47.826 0.00 0.00 0.00 3.16
333 556 4.215109 TCGACTCAATCTCCACCATATCA 58.785 43.478 0.00 0.00 0.00 2.15
339 562 1.187087 ACCTCGACTCAATCTCCACC 58.813 55.000 0.00 0.00 0.00 4.61
348 571 1.751351 CATTGCTCCTACCTCGACTCA 59.249 52.381 0.00 0.00 0.00 3.41
368 591 6.796705 TGAAACGAAGGGAGTATTTCTTTC 57.203 37.500 0.00 0.00 31.86 2.62
372 595 9.902196 TTTATTTTGAAACGAAGGGAGTATTTC 57.098 29.630 0.00 0.00 0.00 2.17
376 599 8.508875 GTCATTTATTTTGAAACGAAGGGAGTA 58.491 33.333 0.00 0.00 0.00 2.59
377 600 7.368059 GTCATTTATTTTGAAACGAAGGGAGT 58.632 34.615 0.00 0.00 0.00 3.85
378 601 6.806739 GGTCATTTATTTTGAAACGAAGGGAG 59.193 38.462 0.00 0.00 0.00 4.30
379 602 6.294843 GGGTCATTTATTTTGAAACGAAGGGA 60.295 38.462 0.00 0.00 0.00 4.20
380 603 5.867174 GGGTCATTTATTTTGAAACGAAGGG 59.133 40.000 0.00 0.00 0.00 3.95
381 604 6.451393 TGGGTCATTTATTTTGAAACGAAGG 58.549 36.000 0.00 0.00 0.00 3.46
382 605 7.651704 AGTTGGGTCATTTATTTTGAAACGAAG 59.348 33.333 0.00 0.00 0.00 3.79
383 606 7.493367 AGTTGGGTCATTTATTTTGAAACGAA 58.507 30.769 0.00 0.00 0.00 3.85
384 607 7.045126 AGTTGGGTCATTTATTTTGAAACGA 57.955 32.000 0.00 0.00 0.00 3.85
385 608 7.707774 AAGTTGGGTCATTTATTTTGAAACG 57.292 32.000 0.00 0.00 0.00 3.60
426 649 8.293867 CGTTCCAAAATAGATGACCAAACTTTA 58.706 33.333 0.00 0.00 0.00 1.85
427 650 7.013846 TCGTTCCAAAATAGATGACCAAACTTT 59.986 33.333 0.00 0.00 0.00 2.66
428 651 6.488683 TCGTTCCAAAATAGATGACCAAACTT 59.511 34.615 0.00 0.00 0.00 2.66
429 652 6.001460 TCGTTCCAAAATAGATGACCAAACT 58.999 36.000 0.00 0.00 0.00 2.66
430 653 6.249035 TCGTTCCAAAATAGATGACCAAAC 57.751 37.500 0.00 0.00 0.00 2.93
431 654 6.072175 CCTTCGTTCCAAAATAGATGACCAAA 60.072 38.462 0.00 0.00 0.00 3.28
432 655 5.414454 CCTTCGTTCCAAAATAGATGACCAA 59.586 40.000 0.00 0.00 0.00 3.67
433 656 4.941263 CCTTCGTTCCAAAATAGATGACCA 59.059 41.667 0.00 0.00 0.00 4.02
434 657 5.183228 TCCTTCGTTCCAAAATAGATGACC 58.817 41.667 0.00 0.00 0.00 4.02
435 658 6.371825 ACTTCCTTCGTTCCAAAATAGATGAC 59.628 38.462 0.00 0.00 0.00 3.06
436 659 6.472887 ACTTCCTTCGTTCCAAAATAGATGA 58.527 36.000 0.00 0.00 0.00 2.92
437 660 6.743575 ACTTCCTTCGTTCCAAAATAGATG 57.256 37.500 0.00 0.00 0.00 2.90
438 661 7.881232 TGTTACTTCCTTCGTTCCAAAATAGAT 59.119 33.333 0.00 0.00 0.00 1.98
439 662 7.218614 TGTTACTTCCTTCGTTCCAAAATAGA 58.781 34.615 0.00 0.00 0.00 1.98
440 663 7.429636 TGTTACTTCCTTCGTTCCAAAATAG 57.570 36.000 0.00 0.00 0.00 1.73
441 664 7.574217 GCATGTTACTTCCTTCGTTCCAAAATA 60.574 37.037 0.00 0.00 0.00 1.40
442 665 6.677913 CATGTTACTTCCTTCGTTCCAAAAT 58.322 36.000 0.00 0.00 0.00 1.82
443 666 5.506649 GCATGTTACTTCCTTCGTTCCAAAA 60.507 40.000 0.00 0.00 0.00 2.44
444 667 4.023536 GCATGTTACTTCCTTCGTTCCAAA 60.024 41.667 0.00 0.00 0.00 3.28
445 668 3.500680 GCATGTTACTTCCTTCGTTCCAA 59.499 43.478 0.00 0.00 0.00 3.53
446 669 3.071479 GCATGTTACTTCCTTCGTTCCA 58.929 45.455 0.00 0.00 0.00 3.53
447 670 3.335579 AGCATGTTACTTCCTTCGTTCC 58.664 45.455 0.00 0.00 0.00 3.62
448 671 4.031426 CGTAGCATGTTACTTCCTTCGTTC 59.969 45.833 16.42 0.00 0.00 3.95
449 672 3.924686 CGTAGCATGTTACTTCCTTCGTT 59.075 43.478 16.42 0.00 0.00 3.85
450 673 3.192001 TCGTAGCATGTTACTTCCTTCGT 59.808 43.478 16.42 0.00 0.00 3.85
451 674 3.546670 GTCGTAGCATGTTACTTCCTTCG 59.453 47.826 16.42 3.18 0.00 3.79
452 675 4.491676 TGTCGTAGCATGTTACTTCCTTC 58.508 43.478 16.42 3.12 0.00 3.46
453 676 4.530710 TGTCGTAGCATGTTACTTCCTT 57.469 40.909 16.42 0.00 0.00 3.36
454 677 4.530710 TTGTCGTAGCATGTTACTTCCT 57.469 40.909 16.42 0.00 0.00 3.36
455 678 5.600908 TTTTGTCGTAGCATGTTACTTCC 57.399 39.130 16.42 5.86 0.00 3.46
456 679 7.787935 CGATATTTTGTCGTAGCATGTTACTTC 59.212 37.037 16.42 10.05 34.56 3.01
457 680 7.618442 CGATATTTTGTCGTAGCATGTTACTT 58.382 34.615 16.42 0.00 34.56 2.24
458 681 7.161829 CGATATTTTGTCGTAGCATGTTACT 57.838 36.000 16.42 0.00 34.56 2.24
496 719 6.673316 GCCTCGCTAAATAACATGCTAATAGC 60.673 42.308 5.12 5.12 42.82 2.97
517 776 2.520904 GCGAGTTGAGCGATGCCTC 61.521 63.158 0.00 0.00 0.00 4.70
524 783 1.592669 CCCTATGGCGAGTTGAGCG 60.593 63.158 0.00 0.00 35.00 5.03
525 784 1.227674 CCCCTATGGCGAGTTGAGC 60.228 63.158 0.00 0.00 0.00 4.26
536 795 1.056660 ACCGTCAATAGCCCCCTATG 58.943 55.000 0.00 0.00 34.54 2.23
541 800 3.007635 GCATTATACCGTCAATAGCCCC 58.992 50.000 0.00 0.00 0.00 5.80
543 802 2.671396 CCGCATTATACCGTCAATAGCC 59.329 50.000 0.00 0.00 0.00 3.93
545 804 4.387862 GGTTCCGCATTATACCGTCAATAG 59.612 45.833 0.00 0.00 0.00 1.73
548 807 2.553086 GGTTCCGCATTATACCGTCAA 58.447 47.619 0.00 0.00 0.00 3.18
549 808 1.202557 GGGTTCCGCATTATACCGTCA 60.203 52.381 0.00 0.00 0.00 4.35
565 824 1.219664 TTCGATGCGAATCGGGGTT 59.780 52.632 25.16 0.00 41.05 4.11
566 825 2.897207 TTCGATGCGAATCGGGGT 59.103 55.556 25.16 0.00 41.05 4.95
615 995 9.799106 CACTATATTTTGAAATGGAGGGAGTAT 57.201 33.333 0.00 0.00 0.00 2.12
616 996 8.778059 ACACTATATTTTGAAATGGAGGGAGTA 58.222 33.333 8.02 0.00 0.00 2.59
617 997 7.557719 CACACTATATTTTGAAATGGAGGGAGT 59.442 37.037 8.02 0.00 0.00 3.85
618 998 7.469181 GCACACTATATTTTGAAATGGAGGGAG 60.469 40.741 8.02 3.36 0.00 4.30
619 999 6.321181 GCACACTATATTTTGAAATGGAGGGA 59.679 38.462 8.02 0.00 0.00 4.20
620 1000 6.461509 GGCACACTATATTTTGAAATGGAGGG 60.462 42.308 0.00 0.97 0.00 4.30
621 1001 6.322201 AGGCACACTATATTTTGAAATGGAGG 59.678 38.462 0.00 0.00 0.00 4.30
622 1002 7.198390 CAGGCACACTATATTTTGAAATGGAG 58.802 38.462 0.00 0.06 0.00 3.86
623 1003 6.405731 GCAGGCACACTATATTTTGAAATGGA 60.406 38.462 0.00 0.00 0.00 3.41
624 1004 5.750067 GCAGGCACACTATATTTTGAAATGG 59.250 40.000 0.00 0.00 0.00 3.16
625 1005 5.456497 CGCAGGCACACTATATTTTGAAATG 59.544 40.000 0.00 0.00 0.00 2.32
626 1006 5.125417 ACGCAGGCACACTATATTTTGAAAT 59.875 36.000 0.00 0.00 0.00 2.17
627 1007 4.457603 ACGCAGGCACACTATATTTTGAAA 59.542 37.500 0.00 0.00 0.00 2.69
628 1008 4.006989 ACGCAGGCACACTATATTTTGAA 58.993 39.130 0.00 0.00 0.00 2.69
629 1009 3.605634 ACGCAGGCACACTATATTTTGA 58.394 40.909 0.00 0.00 0.00 2.69
630 1010 4.355543 AACGCAGGCACACTATATTTTG 57.644 40.909 0.00 0.00 0.00 2.44
631 1011 5.385509 AAAACGCAGGCACACTATATTTT 57.614 34.783 0.00 0.00 0.00 1.82
632 1012 5.385509 AAAAACGCAGGCACACTATATTT 57.614 34.783 0.00 0.00 0.00 1.40
666 1046 9.834628 GTCTCGTTGGTTAAATTTATGATCAAA 57.165 29.630 0.00 0.00 0.00 2.69
667 1047 8.455682 GGTCTCGTTGGTTAAATTTATGATCAA 58.544 33.333 0.00 0.00 0.00 2.57
668 1048 7.201574 CGGTCTCGTTGGTTAAATTTATGATCA 60.202 37.037 0.00 0.00 0.00 2.92
669 1049 7.010738 TCGGTCTCGTTGGTTAAATTTATGATC 59.989 37.037 0.00 0.00 37.69 2.92
670 1050 6.819649 TCGGTCTCGTTGGTTAAATTTATGAT 59.180 34.615 0.00 0.00 37.69 2.45
671 1051 6.164876 TCGGTCTCGTTGGTTAAATTTATGA 58.835 36.000 0.00 0.00 37.69 2.15
672 1052 6.411630 TCGGTCTCGTTGGTTAAATTTATG 57.588 37.500 0.00 0.00 37.69 1.90
673 1053 7.469260 CAATCGGTCTCGTTGGTTAAATTTAT 58.531 34.615 0.00 0.00 37.69 1.40
674 1054 6.621164 GCAATCGGTCTCGTTGGTTAAATTTA 60.621 38.462 0.00 0.00 37.69 1.40
675 1055 5.695818 CAATCGGTCTCGTTGGTTAAATTT 58.304 37.500 0.00 0.00 37.69 1.82
676 1056 4.379082 GCAATCGGTCTCGTTGGTTAAATT 60.379 41.667 0.00 0.00 37.69 1.82
677 1057 3.126343 GCAATCGGTCTCGTTGGTTAAAT 59.874 43.478 0.00 0.00 37.69 1.40
678 1058 2.481185 GCAATCGGTCTCGTTGGTTAAA 59.519 45.455 0.00 0.00 37.69 1.52
679 1059 2.070783 GCAATCGGTCTCGTTGGTTAA 58.929 47.619 0.00 0.00 37.69 2.01
680 1060 1.717194 GCAATCGGTCTCGTTGGTTA 58.283 50.000 0.00 0.00 37.69 2.85
681 1061 1.289109 CGCAATCGGTCTCGTTGGTT 61.289 55.000 0.00 0.00 37.69 3.67
682 1062 1.736645 CGCAATCGGTCTCGTTGGT 60.737 57.895 0.00 0.00 37.69 3.67
683 1063 3.081133 CGCAATCGGTCTCGTTGG 58.919 61.111 0.00 0.00 37.69 3.77
693 1073 0.521291 TTTTTCTCCTGCCGCAATCG 59.479 50.000 0.00 0.00 0.00 3.34
717 1097 9.923143 TGATCATAAATTTAACCGACGAGATAT 57.077 29.630 1.21 0.00 0.00 1.63
718 1098 9.752961 TTGATCATAAATTTAACCGACGAGATA 57.247 29.630 1.21 0.00 0.00 1.98
719 1099 8.657074 TTGATCATAAATTTAACCGACGAGAT 57.343 30.769 1.21 0.00 0.00 2.75
720 1100 8.481974 TTTGATCATAAATTTAACCGACGAGA 57.518 30.769 1.21 0.00 0.00 4.04
721 1101 9.716507 ATTTTGATCATAAATTTAACCGACGAG 57.283 29.630 1.21 0.00 0.00 4.18
734 1114 9.958234 TTCTCGTGTTTCAATTTTGATCATAAA 57.042 25.926 2.59 4.46 37.00 1.40
737 1117 9.778993 CTATTCTCGTGTTTCAATTTTGATCAT 57.221 29.630 0.00 0.00 37.00 2.45
738 1118 8.998377 TCTATTCTCGTGTTTCAATTTTGATCA 58.002 29.630 0.00 0.00 37.00 2.92
739 1119 9.483062 CTCTATTCTCGTGTTTCAATTTTGATC 57.517 33.333 0.00 0.00 37.00 2.92
740 1120 8.454106 CCTCTATTCTCGTGTTTCAATTTTGAT 58.546 33.333 0.00 0.00 37.00 2.57
741 1121 7.659799 TCCTCTATTCTCGTGTTTCAATTTTGA 59.340 33.333 0.00 0.00 34.92 2.69
742 1122 7.806690 TCCTCTATTCTCGTGTTTCAATTTTG 58.193 34.615 0.00 0.00 0.00 2.44
743 1123 7.979444 TCCTCTATTCTCGTGTTTCAATTTT 57.021 32.000 0.00 0.00 0.00 1.82
744 1124 7.119846 CCTTCCTCTATTCTCGTGTTTCAATTT 59.880 37.037 0.00 0.00 0.00 1.82
745 1125 6.595716 CCTTCCTCTATTCTCGTGTTTCAATT 59.404 38.462 0.00 0.00 0.00 2.32
746 1126 6.109359 CCTTCCTCTATTCTCGTGTTTCAAT 58.891 40.000 0.00 0.00 0.00 2.57
747 1127 5.479306 CCTTCCTCTATTCTCGTGTTTCAA 58.521 41.667 0.00 0.00 0.00 2.69
748 1128 4.620803 GCCTTCCTCTATTCTCGTGTTTCA 60.621 45.833 0.00 0.00 0.00 2.69
749 1129 3.866327 GCCTTCCTCTATTCTCGTGTTTC 59.134 47.826 0.00 0.00 0.00 2.78
750 1130 3.369576 GGCCTTCCTCTATTCTCGTGTTT 60.370 47.826 0.00 0.00 0.00 2.83
751 1131 2.168728 GGCCTTCCTCTATTCTCGTGTT 59.831 50.000 0.00 0.00 0.00 3.32
752 1132 1.757699 GGCCTTCCTCTATTCTCGTGT 59.242 52.381 0.00 0.00 0.00 4.49
753 1133 2.035632 AGGCCTTCCTCTATTCTCGTG 58.964 52.381 0.00 0.00 38.72 4.35
754 1134 2.035632 CAGGCCTTCCTCTATTCTCGT 58.964 52.381 0.00 0.00 41.93 4.18
755 1135 1.270041 GCAGGCCTTCCTCTATTCTCG 60.270 57.143 0.00 0.00 41.93 4.04
756 1136 1.765314 TGCAGGCCTTCCTCTATTCTC 59.235 52.381 0.00 0.00 41.93 2.87
757 1137 1.885049 TGCAGGCCTTCCTCTATTCT 58.115 50.000 0.00 0.00 41.93 2.40
758 1138 2.947127 ATGCAGGCCTTCCTCTATTC 57.053 50.000 0.00 0.00 41.93 1.75
759 1139 3.677156 AAATGCAGGCCTTCCTCTATT 57.323 42.857 0.00 0.00 41.93 1.73
760 1140 3.294214 CAAAATGCAGGCCTTCCTCTAT 58.706 45.455 0.00 0.00 41.93 1.98
761 1141 2.621407 CCAAAATGCAGGCCTTCCTCTA 60.621 50.000 0.00 0.00 41.93 2.43
762 1142 1.553706 CAAAATGCAGGCCTTCCTCT 58.446 50.000 0.00 0.00 41.93 3.69
763 1143 0.533951 CCAAAATGCAGGCCTTCCTC 59.466 55.000 0.00 0.00 41.93 3.71
764 1144 0.114954 TCCAAAATGCAGGCCTTCCT 59.885 50.000 0.00 0.00 45.66 3.36
765 1145 0.975887 TTCCAAAATGCAGGCCTTCC 59.024 50.000 0.00 0.00 0.00 3.46
766 1146 1.669795 CGTTCCAAAATGCAGGCCTTC 60.670 52.381 0.00 0.00 0.00 3.46
767 1147 0.318120 CGTTCCAAAATGCAGGCCTT 59.682 50.000 0.00 0.00 0.00 4.35
768 1148 0.539438 TCGTTCCAAAATGCAGGCCT 60.539 50.000 0.00 0.00 0.00 5.19
769 1149 0.109132 CTCGTTCCAAAATGCAGGCC 60.109 55.000 0.00 0.00 0.00 5.19
770 1150 0.598065 ACTCGTTCCAAAATGCAGGC 59.402 50.000 0.00 0.00 0.00 4.85
771 1151 1.879380 TCACTCGTTCCAAAATGCAGG 59.121 47.619 0.00 0.00 0.00 4.85
772 1152 2.549754 ACTCACTCGTTCCAAAATGCAG 59.450 45.455 0.00 0.00 0.00 4.41
773 1153 2.571212 ACTCACTCGTTCCAAAATGCA 58.429 42.857 0.00 0.00 0.00 3.96
774 1154 3.423123 CGTACTCACTCGTTCCAAAATGC 60.423 47.826 0.00 0.00 0.00 3.56
775 1155 3.739300 ACGTACTCACTCGTTCCAAAATG 59.261 43.478 0.00 0.00 36.93 2.32
776 1156 3.986277 ACGTACTCACTCGTTCCAAAAT 58.014 40.909 0.00 0.00 36.93 1.82
777 1157 3.441496 ACGTACTCACTCGTTCCAAAA 57.559 42.857 0.00 0.00 36.93 2.44
778 1158 3.441496 AACGTACTCACTCGTTCCAAA 57.559 42.857 0.00 0.00 45.03 3.28
779 1159 3.441496 AAACGTACTCACTCGTTCCAA 57.559 42.857 3.60 0.00 46.95 3.53
780 1160 3.067180 AGAAAACGTACTCACTCGTTCCA 59.933 43.478 3.60 0.00 46.95 3.53
781 1161 3.424529 CAGAAAACGTACTCACTCGTTCC 59.575 47.826 3.60 0.52 46.95 3.62
782 1162 4.040376 ACAGAAAACGTACTCACTCGTTC 58.960 43.478 3.60 0.00 46.95 3.95
784 1164 3.705043 ACAGAAAACGTACTCACTCGT 57.295 42.857 0.00 0.00 42.12 4.18
785 1165 4.738740 AGAAACAGAAAACGTACTCACTCG 59.261 41.667 0.00 0.00 0.00 4.18
786 1166 5.556570 GCAGAAACAGAAAACGTACTCACTC 60.557 44.000 0.00 0.00 0.00 3.51
787 1167 4.270325 GCAGAAACAGAAAACGTACTCACT 59.730 41.667 0.00 0.00 0.00 3.41
788 1168 4.270325 AGCAGAAACAGAAAACGTACTCAC 59.730 41.667 0.00 0.00 0.00 3.51
789 1169 4.439057 AGCAGAAACAGAAAACGTACTCA 58.561 39.130 0.00 0.00 0.00 3.41
790 1170 5.690857 ACTAGCAGAAACAGAAAACGTACTC 59.309 40.000 0.00 0.00 0.00 2.59
791 1171 5.598769 ACTAGCAGAAACAGAAAACGTACT 58.401 37.500 0.00 0.00 0.00 2.73
804 1184 4.747540 TTACGTGTACGACTAGCAGAAA 57.252 40.909 11.79 0.00 43.02 2.52
805 1185 4.747540 TTTACGTGTACGACTAGCAGAA 57.252 40.909 11.79 0.00 43.02 3.02
806 1186 4.952262 ATTTACGTGTACGACTAGCAGA 57.048 40.909 11.79 0.00 43.02 4.26
807 1187 6.141844 CCATTATTTACGTGTACGACTAGCAG 59.858 42.308 11.79 0.00 43.02 4.24
808 1188 5.972973 CCATTATTTACGTGTACGACTAGCA 59.027 40.000 11.79 0.00 43.02 3.49
809 1189 6.201517 TCCATTATTTACGTGTACGACTAGC 58.798 40.000 11.79 0.00 43.02 3.42
810 1190 7.697710 TGTTCCATTATTTACGTGTACGACTAG 59.302 37.037 11.79 0.00 43.02 2.57
811 1191 7.484641 GTGTTCCATTATTTACGTGTACGACTA 59.515 37.037 11.79 0.00 43.02 2.59
831 1211 5.287035 CCTTCGTACTTGTATTACGTGTTCC 59.713 44.000 0.00 0.00 42.39 3.62
976 1359 0.407139 GGAATGGATGGATCAGGGGG 59.593 60.000 0.00 0.00 0.00 5.40
1228 1613 2.032681 GGATATGGCGGGTGGAGC 59.967 66.667 0.00 0.00 0.00 4.70
1262 1647 5.241949 AGAGATTACTGTATCGGATCGCTTT 59.758 40.000 0.00 0.00 0.00 3.51
1315 1701 2.379907 ACCAGAACCAGAACCATCCAAT 59.620 45.455 0.00 0.00 0.00 3.16
1354 1746 2.624838 AGTTTGAATGGCTGGACTTGTG 59.375 45.455 0.00 0.00 0.00 3.33
1490 2032 4.589374 ACAGATATTTAGGAACGGAGGGAG 59.411 45.833 0.00 0.00 0.00 4.30
1491 2033 4.553678 ACAGATATTTAGGAACGGAGGGA 58.446 43.478 0.00 0.00 0.00 4.20
1492 2034 4.589374 AGACAGATATTTAGGAACGGAGGG 59.411 45.833 0.00 0.00 0.00 4.30
1493 2035 5.793030 AGACAGATATTTAGGAACGGAGG 57.207 43.478 0.00 0.00 0.00 4.30
1494 2036 8.494016 AAAAAGACAGATATTTAGGAACGGAG 57.506 34.615 0.00 0.00 0.00 4.63
1495 2037 9.595823 CTAAAAAGACAGATATTTAGGAACGGA 57.404 33.333 0.00 0.00 33.69 4.69
1496 2038 9.595823 TCTAAAAAGACAGATATTTAGGAACGG 57.404 33.333 0.00 0.00 36.48 4.44
1509 2051 9.573166 TCCATTTGAAATCTCTAAAAAGACAGA 57.427 29.630 0.00 0.00 0.00 3.41
1510 2052 9.617975 GTCCATTTGAAATCTCTAAAAAGACAG 57.382 33.333 0.00 0.00 0.00 3.51
1511 2053 9.354673 AGTCCATTTGAAATCTCTAAAAAGACA 57.645 29.630 0.00 0.00 0.00 3.41
1517 2059 9.739276 ACATGTAGTCCATTTGAAATCTCTAAA 57.261 29.630 0.00 0.00 0.00 1.85
1525 2067 9.952030 TGTCTTATACATGTAGTCCATTTGAAA 57.048 29.630 11.91 0.00 31.43 2.69
1555 2097 9.547753 GGAGCATGAGTAAATCTACAATCTAAA 57.452 33.333 0.00 0.00 0.00 1.85
1556 2098 7.867909 CGGAGCATGAGTAAATCTACAATCTAA 59.132 37.037 0.00 0.00 0.00 2.10
1557 2099 7.014326 ACGGAGCATGAGTAAATCTACAATCTA 59.986 37.037 0.00 0.00 0.00 1.98
1558 2100 6.183360 ACGGAGCATGAGTAAATCTACAATCT 60.183 38.462 0.00 0.00 0.00 2.40
1559 2101 5.986135 ACGGAGCATGAGTAAATCTACAATC 59.014 40.000 0.00 0.00 0.00 2.67
1560 2102 5.918608 ACGGAGCATGAGTAAATCTACAAT 58.081 37.500 0.00 0.00 0.00 2.71
1561 2103 5.339008 ACGGAGCATGAGTAAATCTACAA 57.661 39.130 0.00 0.00 0.00 2.41
1562 2104 6.040504 ACATACGGAGCATGAGTAAATCTACA 59.959 38.462 0.00 0.00 0.00 2.74
1563 2105 6.448006 ACATACGGAGCATGAGTAAATCTAC 58.552 40.000 0.00 0.00 0.00 2.59
1564 2106 6.650427 ACATACGGAGCATGAGTAAATCTA 57.350 37.500 0.00 0.00 0.00 1.98
1565 2107 5.537300 ACATACGGAGCATGAGTAAATCT 57.463 39.130 0.00 0.00 0.00 2.40
1566 2108 6.448006 ACTACATACGGAGCATGAGTAAATC 58.552 40.000 0.00 0.00 0.00 2.17
1567 2109 6.040504 TGACTACATACGGAGCATGAGTAAAT 59.959 38.462 0.00 0.00 0.00 1.40
1568 2110 5.358725 TGACTACATACGGAGCATGAGTAAA 59.641 40.000 0.00 0.00 0.00 2.01
1569 2111 4.885325 TGACTACATACGGAGCATGAGTAA 59.115 41.667 0.00 0.00 0.00 2.24
1570 2112 4.275196 GTGACTACATACGGAGCATGAGTA 59.725 45.833 0.00 0.00 0.00 2.59
1571 2113 3.066900 GTGACTACATACGGAGCATGAGT 59.933 47.826 0.00 0.00 0.00 3.41
1572 2114 3.316588 AGTGACTACATACGGAGCATGAG 59.683 47.826 0.00 0.00 0.00 2.90
1573 2115 3.288092 AGTGACTACATACGGAGCATGA 58.712 45.455 0.00 0.00 0.00 3.07
1574 2116 3.717400 AGTGACTACATACGGAGCATG 57.283 47.619 0.00 0.00 0.00 4.06
1575 2117 3.447586 ACAAGTGACTACATACGGAGCAT 59.552 43.478 0.00 0.00 0.00 3.79
1576 2118 2.823747 ACAAGTGACTACATACGGAGCA 59.176 45.455 0.00 0.00 0.00 4.26
1577 2119 3.505464 ACAAGTGACTACATACGGAGC 57.495 47.619 0.00 0.00 0.00 4.70
1578 2120 5.055642 TCAACAAGTGACTACATACGGAG 57.944 43.478 0.00 0.00 0.00 4.63
1579 2121 5.456548 TTCAACAAGTGACTACATACGGA 57.543 39.130 0.00 0.00 35.39 4.69
1580 2122 6.590292 AGATTTCAACAAGTGACTACATACGG 59.410 38.462 0.00 0.00 35.39 4.02
1581 2123 7.542477 AGAGATTTCAACAAGTGACTACATACG 59.458 37.037 0.00 0.00 35.39 3.06
1582 2124 8.764524 AGAGATTTCAACAAGTGACTACATAC 57.235 34.615 0.00 0.00 35.39 2.39
1584 2126 8.807118 TCTAGAGATTTCAACAAGTGACTACAT 58.193 33.333 0.00 0.00 35.39 2.29
1585 2127 8.178313 TCTAGAGATTTCAACAAGTGACTACA 57.822 34.615 0.00 0.00 35.39 2.74
1586 2128 9.477484 TTTCTAGAGATTTCAACAAGTGACTAC 57.523 33.333 0.00 0.00 35.39 2.73
1587 2129 9.698309 CTTTCTAGAGATTTCAACAAGTGACTA 57.302 33.333 0.00 0.00 35.39 2.59
1588 2130 8.424918 TCTTTCTAGAGATTTCAACAAGTGACT 58.575 33.333 0.00 0.00 35.39 3.41
1589 2131 8.491950 GTCTTTCTAGAGATTTCAACAAGTGAC 58.508 37.037 0.00 0.00 35.39 3.67
1590 2132 8.204160 TGTCTTTCTAGAGATTTCAACAAGTGA 58.796 33.333 0.00 0.00 0.00 3.41
1591 2133 8.370493 TGTCTTTCTAGAGATTTCAACAAGTG 57.630 34.615 0.00 0.00 0.00 3.16
1592 2134 8.964476 TTGTCTTTCTAGAGATTTCAACAAGT 57.036 30.769 0.00 0.00 0.00 3.16
1610 2152 9.807921 TCCCTCTGTTTCTAAATATTTGTCTTT 57.192 29.630 11.05 0.00 0.00 2.52
1611 2153 9.454859 CTCCCTCTGTTTCTAAATATTTGTCTT 57.545 33.333 11.05 0.00 0.00 3.01
1612 2154 8.606830 ACTCCCTCTGTTTCTAAATATTTGTCT 58.393 33.333 11.05 0.00 0.00 3.41
1613 2155 8.794335 ACTCCCTCTGTTTCTAAATATTTGTC 57.206 34.615 11.05 0.00 0.00 3.18
1614 2156 9.892130 CTACTCCCTCTGTTTCTAAATATTTGT 57.108 33.333 11.05 0.00 0.00 2.83
1621 2163 9.862149 AAATTTTCTACTCCCTCTGTTTCTAAA 57.138 29.630 0.00 0.00 0.00 1.85
1622 2164 9.503399 GAAATTTTCTACTCCCTCTGTTTCTAA 57.497 33.333 1.79 0.00 0.00 2.10
1623 2165 7.817962 CGAAATTTTCTACTCCCTCTGTTTCTA 59.182 37.037 7.50 0.00 0.00 2.10
1624 2166 6.651225 CGAAATTTTCTACTCCCTCTGTTTCT 59.349 38.462 7.50 0.00 0.00 2.52
1625 2167 6.427242 ACGAAATTTTCTACTCCCTCTGTTTC 59.573 38.462 7.50 0.00 0.00 2.78
1626 2168 6.296803 ACGAAATTTTCTACTCCCTCTGTTT 58.703 36.000 7.50 0.00 0.00 2.83
1627 2169 5.866207 ACGAAATTTTCTACTCCCTCTGTT 58.134 37.500 7.50 0.00 0.00 3.16
1628 2170 5.246429 AGACGAAATTTTCTACTCCCTCTGT 59.754 40.000 7.50 0.00 0.00 3.41
1629 2171 5.725362 AGACGAAATTTTCTACTCCCTCTG 58.275 41.667 7.50 0.00 0.00 3.35
1630 2172 5.717654 AGAGACGAAATTTTCTACTCCCTCT 59.282 40.000 19.22 12.79 33.35 3.69
1631 2173 5.968254 AGAGACGAAATTTTCTACTCCCTC 58.032 41.667 19.22 11.47 33.35 4.30
1632 2174 5.480772 TGAGAGACGAAATTTTCTACTCCCT 59.519 40.000 19.22 9.44 33.35 4.20
1633 2175 5.721232 TGAGAGACGAAATTTTCTACTCCC 58.279 41.667 19.22 13.29 33.35 4.30
1634 2176 6.183360 GCTTGAGAGACGAAATTTTCTACTCC 60.183 42.308 19.22 14.44 33.35 3.85
1635 2177 6.366332 TGCTTGAGAGACGAAATTTTCTACTC 59.634 38.462 17.04 17.04 33.20 2.59
1636 2178 6.223852 TGCTTGAGAGACGAAATTTTCTACT 58.776 36.000 7.50 6.21 0.00 2.57
1637 2179 6.467723 TGCTTGAGAGACGAAATTTTCTAC 57.532 37.500 7.50 1.90 0.00 2.59
1638 2180 6.873605 TCATGCTTGAGAGACGAAATTTTCTA 59.126 34.615 7.50 0.00 0.00 2.10
1639 2181 5.702670 TCATGCTTGAGAGACGAAATTTTCT 59.297 36.000 7.50 0.00 0.00 2.52
1773 2331 4.415150 ACTGCTGCGTGGATGGGG 62.415 66.667 0.00 0.00 0.00 4.96
1774 2332 2.821366 GACTGCTGCGTGGATGGG 60.821 66.667 2.10 0.00 0.00 4.00
1942 2870 0.530744 GTAGGCAGACGGACATGTGA 59.469 55.000 1.15 0.00 0.00 3.58
1947 2875 3.694746 CCAGTAGGCAGACGGACA 58.305 61.111 0.00 0.00 0.00 4.02
2138 3069 5.249420 GCAATACCAGAGAGTTCCTTCTTT 58.751 41.667 0.00 0.00 0.00 2.52
2327 3282 0.748450 CCCGCTCTTCCATTACCGTA 59.252 55.000 0.00 0.00 0.00 4.02
2417 3373 1.002624 TTCCGGCGATTTGCTCCTT 60.003 52.632 9.30 0.00 45.43 3.36
2733 3795 1.650528 CTCCTCCTCCTCCACAAAGT 58.349 55.000 0.00 0.00 0.00 2.66
2997 4551 5.420725 TTTCTTCTAAGCTGGAGCACATA 57.579 39.130 0.65 0.00 45.16 2.29
3015 4569 5.684704 TCAGATAAAGCCGGATGATTTTCT 58.315 37.500 5.05 0.00 0.00 2.52
3076 4630 5.289193 CCGGTCACATTTGATGCAAATTTAG 59.711 40.000 2.84 0.00 40.60 1.85
3113 4675 1.549950 GGGAGCCAACCATCCAAAGAA 60.550 52.381 0.00 0.00 37.33 2.52
3158 4720 4.508128 CCGTCCATGGACCGGTCG 62.508 72.222 34.05 23.58 41.76 4.79
3260 4822 2.771089 ACCAGAAGTGTGTGTATGCTG 58.229 47.619 0.00 0.00 0.00 4.41
3383 6941 9.899226 GTCTTAAATTCAAGAAACTGTGCTAAT 57.101 29.630 0.00 0.00 36.34 1.73
3548 7107 1.402968 CACCGCTCATTCCATTTCCTG 59.597 52.381 0.00 0.00 0.00 3.86
3642 7201 9.189723 CTCTTTTTCAAATCTCCATCTGTTTTC 57.810 33.333 0.00 0.00 0.00 2.29
3653 7212 9.934190 GATCTAGCATTCTCTTTTTCAAATCTC 57.066 33.333 0.00 0.00 0.00 2.75
3697 7256 6.860080 TGTATCACTTCTACGAACCCTAAAG 58.140 40.000 0.00 0.00 0.00 1.85
3943 7502 7.791029 TCGAGCCCATATATGATAATAAAGCA 58.209 34.615 14.54 0.00 0.00 3.91
4410 8006 1.774254 TGAGAGGGTTGTGTTGATGGT 59.226 47.619 0.00 0.00 0.00 3.55
4544 8144 4.841422 ACATGAGATGTTTCAGGAGAAGG 58.159 43.478 0.00 0.00 41.63 3.46
4671 8272 1.150536 GGTGCCTCCCAACAAGACA 59.849 57.895 0.00 0.00 0.00 3.41
4672 8273 4.081050 GGTGCCTCCCAACAAGAC 57.919 61.111 0.00 0.00 0.00 3.01
4793 8394 7.351981 CAGTTGATATTTCACGAGTTTGTTCA 58.648 34.615 0.00 0.00 0.00 3.18
4863 8464 5.602628 AGCCTGTTAGCTTACTTACATAGC 58.397 41.667 4.27 0.00 41.41 2.97
5341 8942 6.591834 AGATCAATTGTCTACAAAAGAGGTCG 59.408 38.462 5.13 0.00 39.55 4.79
5435 9040 6.174049 GTTTTAGGAGGAAGCACAGTCTAAT 58.826 40.000 0.00 0.00 0.00 1.73
5443 9048 4.023963 GTCACTTGTTTTAGGAGGAAGCAC 60.024 45.833 0.00 0.00 0.00 4.40
5658 9264 2.878406 CAGGTATATTGCCAACTTCCGG 59.122 50.000 0.00 0.00 0.00 5.14
5661 9267 4.580580 CCTTCCAGGTATATTGCCAACTTC 59.419 45.833 0.00 0.00 0.00 3.01
5907 9513 2.575921 TCTCCCTGATGGTGGAATCT 57.424 50.000 0.00 0.00 34.77 2.40
6145 9751 4.286707 ACAAAATTTGGTCTATAGGGGGC 58.713 43.478 10.71 0.00 34.12 5.80
6419 10025 2.632028 AGCTTTCTCTTCAGCTCTCACA 59.368 45.455 0.00 0.00 43.12 3.58
6729 10336 3.304190 CGTTATCGTCGTCCATGTCCATA 60.304 47.826 0.00 0.00 0.00 2.74
6852 10459 3.854994 AGGAATGAGGATTTTCCCACTCT 59.145 43.478 0.00 0.00 41.99 3.24
7068 10675 2.154462 CTCTGGGTCAATGCGAAAACT 58.846 47.619 0.00 0.00 0.00 2.66
7408 11189 3.686726 GGAGATGCAAACTGAACTACCTG 59.313 47.826 0.00 0.00 0.00 4.00
7427 11208 8.651389 TCCATAGGTTTTCATATTCTACAGGAG 58.349 37.037 0.00 0.00 0.00 3.69
7433 11214 7.289317 AGGACGTCCATAGGTTTTCATATTCTA 59.711 37.037 35.00 0.00 38.89 2.10
7482 11264 4.730657 GACAGATTGTCTCAATGCAAAGG 58.269 43.478 0.00 0.00 43.73 3.11
7561 11574 2.570135 CTGAGCTTGGGAATTCTAGCC 58.430 52.381 17.91 7.85 34.19 3.93
7564 11577 1.134401 CCGCTGAGCTTGGGAATTCTA 60.134 52.381 1.78 0.00 0.00 2.10
7571 11584 1.523258 CTGATCCGCTGAGCTTGGG 60.523 63.158 1.78 0.00 0.00 4.12
7600 11613 2.833794 TCAGCAAGGTGTGTGAAGTAC 58.166 47.619 0.00 0.00 0.00 2.73
7787 11818 0.911769 AACCCAGGCAATCGATGAGA 59.088 50.000 0.00 0.00 0.00 3.27
7788 11819 1.019673 CAACCCAGGCAATCGATGAG 58.980 55.000 0.00 0.00 0.00 2.90
7890 11921 1.435515 CTCTTCCTCCGCTCCTTCG 59.564 63.158 0.00 0.00 0.00 3.79
7891 11922 0.973496 ACCTCTTCCTCCGCTCCTTC 60.973 60.000 0.00 0.00 0.00 3.46
7892 11923 0.545548 AACCTCTTCCTCCGCTCCTT 60.546 55.000 0.00 0.00 0.00 3.36
7893 11924 0.545548 AAACCTCTTCCTCCGCTCCT 60.546 55.000 0.00 0.00 0.00 3.69
7894 11925 0.391793 CAAACCTCTTCCTCCGCTCC 60.392 60.000 0.00 0.00 0.00 4.70
7895 11926 0.608640 TCAAACCTCTTCCTCCGCTC 59.391 55.000 0.00 0.00 0.00 5.03
7896 11927 1.280457 ATCAAACCTCTTCCTCCGCT 58.720 50.000 0.00 0.00 0.00 5.52
7897 11928 2.010497 GAATCAAACCTCTTCCTCCGC 58.990 52.381 0.00 0.00 0.00 5.54
7898 11929 2.271800 CGAATCAAACCTCTTCCTCCG 58.728 52.381 0.00 0.00 0.00 4.63
7899 11930 2.010497 GCGAATCAAACCTCTTCCTCC 58.990 52.381 0.00 0.00 0.00 4.30
7900 11931 2.979240 AGCGAATCAAACCTCTTCCTC 58.021 47.619 0.00 0.00 0.00 3.71
7901 11932 3.077359 CAAGCGAATCAAACCTCTTCCT 58.923 45.455 0.00 0.00 0.00 3.36
7902 11933 2.414691 GCAAGCGAATCAAACCTCTTCC 60.415 50.000 0.00 0.00 0.00 3.46
7903 11934 2.414691 GGCAAGCGAATCAAACCTCTTC 60.415 50.000 0.00 0.00 0.00 2.87
7904 11935 1.541588 GGCAAGCGAATCAAACCTCTT 59.458 47.619 0.00 0.00 0.00 2.85
7905 11936 1.168714 GGCAAGCGAATCAAACCTCT 58.831 50.000 0.00 0.00 0.00 3.69
7906 11937 0.171231 GGGCAAGCGAATCAAACCTC 59.829 55.000 0.00 0.00 0.00 3.85
7907 11938 0.251341 AGGGCAAGCGAATCAAACCT 60.251 50.000 0.00 0.00 0.00 3.50
7908 11939 0.171231 GAGGGCAAGCGAATCAAACC 59.829 55.000 0.00 0.00 0.00 3.27
7909 11940 0.171231 GGAGGGCAAGCGAATCAAAC 59.829 55.000 0.00 0.00 0.00 2.93
7910 11941 0.038166 AGGAGGGCAAGCGAATCAAA 59.962 50.000 0.00 0.00 0.00 2.69
7911 11942 0.392998 GAGGAGGGCAAGCGAATCAA 60.393 55.000 0.00 0.00 0.00 2.57
7912 11943 1.221840 GAGGAGGGCAAGCGAATCA 59.778 57.895 0.00 0.00 0.00 2.57
7913 11944 0.179034 ATGAGGAGGGCAAGCGAATC 60.179 55.000 0.00 0.00 0.00 2.52
7914 11945 0.179034 GATGAGGAGGGCAAGCGAAT 60.179 55.000 0.00 0.00 0.00 3.34
7915 11946 1.221840 GATGAGGAGGGCAAGCGAA 59.778 57.895 0.00 0.00 0.00 4.70
7916 11947 2.903357 GATGAGGAGGGCAAGCGA 59.097 61.111 0.00 0.00 0.00 4.93
7917 11948 2.587194 CGATGAGGAGGGCAAGCG 60.587 66.667 0.00 0.00 0.00 4.68
7918 11949 1.522580 GACGATGAGGAGGGCAAGC 60.523 63.158 0.00 0.00 0.00 4.01
7919 11950 1.339610 CTAGACGATGAGGAGGGCAAG 59.660 57.143 0.00 0.00 0.00 4.01
7920 11951 1.063942 TCTAGACGATGAGGAGGGCAA 60.064 52.381 0.00 0.00 0.00 4.52
7921 11952 0.551396 TCTAGACGATGAGGAGGGCA 59.449 55.000 0.00 0.00 0.00 5.36
7922 11953 1.917872 ATCTAGACGATGAGGAGGGC 58.082 55.000 0.00 0.00 0.00 5.19
7931 11962 4.667573 TCCCTTCATAGCATCTAGACGAT 58.332 43.478 0.00 0.00 0.00 3.73
7932 11963 4.075682 CTCCCTTCATAGCATCTAGACGA 58.924 47.826 0.00 0.00 0.00 4.20
7933 11964 3.366883 GCTCCCTTCATAGCATCTAGACG 60.367 52.174 0.00 0.00 38.63 4.18
7934 11965 3.366883 CGCTCCCTTCATAGCATCTAGAC 60.367 52.174 0.00 0.00 38.70 2.59
7935 11966 2.822561 CGCTCCCTTCATAGCATCTAGA 59.177 50.000 0.00 0.00 38.70 2.43
7936 11967 2.560542 ACGCTCCCTTCATAGCATCTAG 59.439 50.000 0.00 0.00 38.70 2.43
7937 11968 2.598565 ACGCTCCCTTCATAGCATCTA 58.401 47.619 0.00 0.00 38.70 1.98
7938 11969 1.418334 ACGCTCCCTTCATAGCATCT 58.582 50.000 0.00 0.00 38.70 2.90
7939 11970 3.386768 TTACGCTCCCTTCATAGCATC 57.613 47.619 0.00 0.00 38.70 3.91
7940 11971 4.528596 ACTATTACGCTCCCTTCATAGCAT 59.471 41.667 0.00 0.00 38.70 3.79
7941 11972 3.895656 ACTATTACGCTCCCTTCATAGCA 59.104 43.478 0.00 0.00 38.70 3.49
7942 11973 4.487019 GACTATTACGCTCCCTTCATAGC 58.513 47.826 0.00 0.00 35.33 2.97
7943 11974 4.215827 ACGACTATTACGCTCCCTTCATAG 59.784 45.833 0.00 0.00 0.00 2.23
7944 11975 4.023450 CACGACTATTACGCTCCCTTCATA 60.023 45.833 0.00 0.00 0.00 2.15
7945 11976 2.957006 ACGACTATTACGCTCCCTTCAT 59.043 45.455 0.00 0.00 0.00 2.57
7946 11977 2.098607 CACGACTATTACGCTCCCTTCA 59.901 50.000 0.00 0.00 0.00 3.02
7947 11978 2.098770 ACACGACTATTACGCTCCCTTC 59.901 50.000 0.00 0.00 0.00 3.46
7948 11979 2.097825 ACACGACTATTACGCTCCCTT 58.902 47.619 0.00 0.00 0.00 3.95
7949 11980 1.674962 GACACGACTATTACGCTCCCT 59.325 52.381 0.00 0.00 0.00 4.20
7950 11981 1.674962 AGACACGACTATTACGCTCCC 59.325 52.381 0.00 0.00 0.00 4.30
7951 11982 3.361414 GAAGACACGACTATTACGCTCC 58.639 50.000 0.00 0.00 0.00 4.70
7952 11983 3.027710 CGAAGACACGACTATTACGCTC 58.972 50.000 0.00 0.00 35.09 5.03
7953 11984 2.674852 TCGAAGACACGACTATTACGCT 59.325 45.455 0.00 0.00 37.37 5.07
7954 11985 3.027710 CTCGAAGACACGACTATTACGC 58.972 50.000 0.00 0.00 37.37 4.42
7955 11986 3.027710 GCTCGAAGACACGACTATTACG 58.972 50.000 0.00 0.00 37.37 3.18
7956 11987 3.027710 CGCTCGAAGACACGACTATTAC 58.972 50.000 0.00 0.00 37.37 1.89
7957 11988 2.031314 CCGCTCGAAGACACGACTATTA 59.969 50.000 0.00 0.00 37.37 0.98
7958 11989 1.202154 CCGCTCGAAGACACGACTATT 60.202 52.381 0.00 0.00 37.37 1.73
7959 11990 0.377554 CCGCTCGAAGACACGACTAT 59.622 55.000 0.00 0.00 37.37 2.12
7960 11991 1.792301 CCGCTCGAAGACACGACTA 59.208 57.895 0.00 0.00 37.37 2.59
7961 11992 2.561885 CCGCTCGAAGACACGACT 59.438 61.111 0.00 0.00 37.37 4.18


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.