Multiple sequence alignment - TraesCS2B01G261400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G261400 chr2B 100.000 8089 0 0 1 8089 333861494 333869582 0.000000e+00 14938.0
1 TraesCS2B01G261400 chr2B 94.207 984 46 5 7112 8089 371937547 371938525 0.000000e+00 1491.0
2 TraesCS2B01G261400 chr2B 93.234 1005 53 6 7094 8088 539965583 539966582 0.000000e+00 1465.0
3 TraesCS2B01G261400 chr4B 88.111 1657 148 31 3875 5504 224971544 224969910 0.000000e+00 1923.0
4 TraesCS2B01G261400 chr4B 94.516 1003 48 4 7094 8089 609104288 609103286 0.000000e+00 1541.0
5 TraesCS2B01G261400 chr4B 95.521 960 42 1 6138 7097 149993726 149994684 0.000000e+00 1533.0
6 TraesCS2B01G261400 chr4B 95.104 960 45 2 6138 7096 609105364 609104406 0.000000e+00 1511.0
7 TraesCS2B01G261400 chr4B 93.261 1009 53 11 7094 8089 531341745 531342751 0.000000e+00 1472.0
8 TraesCS2B01G261400 chr4B 93.062 1009 57 8 7094 8089 175307069 175306061 0.000000e+00 1463.0
9 TraesCS2B01G261400 chr4B 94.944 356 11 3 896 1247 421861058 421860706 1.190000e-152 551.0
10 TraesCS2B01G261400 chr4B 88.889 405 32 8 3372 3771 224971927 224971531 3.390000e-133 486.0
11 TraesCS2B01G261400 chr4B 92.308 338 22 4 912 1247 149000888 149000553 2.040000e-130 477.0
12 TraesCS2B01G261400 chr4B 91.420 338 25 4 912 1247 149037112 149036777 2.060000e-125 460.0
13 TraesCS2B01G261400 chr4B 88.921 343 35 2 5577 5918 224940209 224939869 3.490000e-113 420.0
14 TraesCS2B01G261400 chr4B 85.887 248 34 1 2195 2442 300055801 300055555 6.230000e-66 263.0
15 TraesCS2B01G261400 chr4B 89.796 196 18 2 5945 6140 224937472 224937279 4.850000e-62 250.0
16 TraesCS2B01G261400 chr4B 92.073 164 11 1 3215 3376 224976139 224975976 6.310000e-56 230.0
17 TraesCS2B01G261400 chr4B 98.077 104 0 2 3765 3867 373783094 373783196 6.450000e-41 180.0
18 TraesCS2B01G261400 chr4B 83.500 200 19 11 5944 6140 83774320 83774508 3.000000e-39 174.0
19 TraesCS2B01G261400 chr4B 82.796 186 17 13 692 870 146688398 146688575 1.410000e-32 152.0
20 TraesCS2B01G261400 chr4B 85.333 150 18 4 876 1023 440437735 440437882 1.410000e-32 152.0
21 TraesCS2B01G261400 chr4B 91.765 85 7 0 2107 2191 300055846 300055762 1.430000e-22 119.0
22 TraesCS2B01G261400 chr4D 96.455 959 33 1 6138 7096 366046135 366047092 0.000000e+00 1581.0
23 TraesCS2B01G261400 chr4D 88.942 841 73 6 2926 3746 139098974 139098134 0.000000e+00 1020.0
24 TraesCS2B01G261400 chr4D 88.844 493 47 6 2440 2930 139188426 139187940 4.180000e-167 599.0
25 TraesCS2B01G261400 chr4D 80.710 648 96 13 1248 1873 139202348 139201708 2.040000e-130 477.0
26 TraesCS2B01G261400 chr4D 88.037 326 27 6 1870 2193 139188979 139188664 7.660000e-100 375.0
27 TraesCS2B01G261400 chr4D 97.872 47 1 0 3653 3699 419984426 419984380 1.870000e-11 82.4
28 TraesCS2B01G261400 chr7B 98.971 875 8 1 1 874 698511837 698510963 0.000000e+00 1565.0
29 TraesCS2B01G261400 chr7B 98.062 877 15 2 1 876 376346645 376347520 0.000000e+00 1524.0
30 TraesCS2B01G261400 chr7B 94.100 983 40 8 7112 8089 356551694 356552663 0.000000e+00 1478.0
31 TraesCS2B01G261400 chr7B 93.896 983 52 5 7112 8089 246957310 246956331 0.000000e+00 1476.0
32 TraesCS2B01G261400 chr7B 80.882 476 59 21 4930 5394 607319154 607319608 6.010000e-91 346.0
33 TraesCS2B01G261400 chr7B 80.952 420 58 17 4930 5340 190260318 190260724 6.090000e-81 313.0
34 TraesCS2B01G261400 chr7B 85.492 193 17 7 5945 6136 359513207 359513389 2.980000e-44 191.0
35 TraesCS2B01G261400 chr7B 78.431 153 25 7 876 1023 295344550 295344401 8.640000e-15 93.5
36 TraesCS2B01G261400 chr5B 95.938 960 38 1 6138 7097 209633217 209632259 0.000000e+00 1555.0
37 TraesCS2B01G261400 chr5B 90.659 364 18 3 1 348 430377342 430377705 3.420000e-128 470.0
38 TraesCS2B01G261400 chr5B 89.560 364 22 3 1 348 575517381 575517744 1.600000e-121 448.0
39 TraesCS2B01G261400 chr5B 99.010 101 1 0 3767 3867 635092806 635092906 1.790000e-41 182.0
40 TraesCS2B01G261400 chr5B 97.170 106 1 2 3763 3867 462745482 462745586 2.320000e-40 178.0
41 TraesCS2B01G261400 chr5B 82.323 198 19 12 5945 6140 68486622 68486805 3.020000e-34 158.0
42 TraesCS2B01G261400 chr5B 93.182 44 1 1 5875 5918 117963286 117963327 6.780000e-06 63.9
43 TraesCS2B01G261400 chr6A 95.521 960 41 2 6138 7096 197860591 197859633 0.000000e+00 1533.0
44 TraesCS2B01G261400 chr6A 85.492 193 17 8 5945 6136 365991928 365992110 2.980000e-44 191.0
45 TraesCS2B01G261400 chr3B 95.412 959 43 1 6138 7096 371039072 371038115 0.000000e+00 1526.0
46 TraesCS2B01G261400 chr3B 88.932 515 50 6 4389 4900 585646890 585646380 5.330000e-176 628.0
47 TraesCS2B01G261400 chr3B 91.289 287 19 6 876 1160 286889456 286889174 3.540000e-103 387.0
48 TraesCS2B01G261400 chr3B 95.105 143 7 0 1105 1247 286889188 286889046 8.170000e-55 226.0
49 TraesCS2B01G261400 chr3B 79.439 321 37 17 5291 5590 585646054 585645742 4.950000e-47 200.0
50 TraesCS2B01G261400 chr3B 84.343 198 18 9 5945 6140 262251679 262251493 1.790000e-41 182.0
51 TraesCS2B01G261400 chr3B 98.077 104 1 1 3765 3867 79949098 79948995 6.450000e-41 180.0
52 TraesCS2B01G261400 chr3B 87.500 128 14 2 694 820 257783513 257783387 6.540000e-31 147.0
53 TraesCS2B01G261400 chr3B 85.393 89 10 3 4189 4276 412406610 412406524 1.120000e-13 89.8
54 TraesCS2B01G261400 chr3B 94.444 54 3 0 3653 3706 728797562 728797615 5.200000e-12 84.2
55 TraesCS2B01G261400 chr3A 95.412 959 43 1 6138 7096 361576230 361575273 0.000000e+00 1526.0
56 TraesCS2B01G261400 chr3A 94.444 54 3 0 3653 3706 686680952 686681005 5.200000e-12 84.2
57 TraesCS2B01G261400 chr1B 94.710 983 47 3 7112 8089 148510266 148511248 0.000000e+00 1522.0
58 TraesCS2B01G261400 chr1B 97.254 874 23 1 1 873 385768593 385767720 0.000000e+00 1480.0
59 TraesCS2B01G261400 chr1B 86.547 944 99 20 4289 5218 223898969 223899898 0.000000e+00 1014.0
60 TraesCS2B01G261400 chr1B 90.892 527 34 4 346 871 560335800 560336313 0.000000e+00 695.0
61 TraesCS2B01G261400 chr1B 87.321 418 28 10 3879 4274 223898386 223898800 9.570000e-124 455.0
62 TraesCS2B01G261400 chr1B 78.407 653 67 34 5285 5918 223899930 223900527 2.780000e-94 357.0
63 TraesCS2B01G261400 chr1B 86.982 169 19 3 3362 3529 223897917 223898083 3.850000e-43 187.0
64 TraesCS2B01G261400 chr1B 98.131 107 0 2 3762 3867 604039661 604039766 1.390000e-42 185.0
65 TraesCS2B01G261400 chr1B 91.176 102 8 1 3574 3674 223898239 223898340 3.940000e-28 137.0
66 TraesCS2B01G261400 chr1B 84.091 88 12 1 4189 4276 288550831 288550746 5.200000e-12 84.2
67 TraesCS2B01G261400 chr5A 95.114 962 44 3 6138 7097 216692664 216693624 0.000000e+00 1513.0
68 TraesCS2B01G261400 chr5A 94.828 290 15 0 1 290 548681520 548681231 3.440000e-123 453.0
69 TraesCS2B01G261400 chr5A 85.864 191 15 7 5945 6133 607833668 607833848 8.280000e-45 193.0
70 TraesCS2B01G261400 chr5A 100.000 38 0 0 282 319 548681223 548681186 4.050000e-08 71.3
71 TraesCS2B01G261400 chr5D 95.109 961 44 3 6138 7097 199084944 199085902 0.000000e+00 1511.0
72 TraesCS2B01G261400 chr5D 99.000 100 1 0 3768 3867 42925822 42925723 6.450000e-41 180.0
73 TraesCS2B01G261400 chr6B 94.399 982 44 6 7118 8089 252381911 252380931 0.000000e+00 1498.0
74 TraesCS2B01G261400 chr6B 87.524 1034 93 21 3879 4900 109135752 109134743 0.000000e+00 1162.0
75 TraesCS2B01G261400 chr6B 83.730 756 95 18 4602 5345 431501162 431500423 0.000000e+00 689.0
76 TraesCS2B01G261400 chr6B 90.782 358 31 2 891 1247 328337795 328338151 2.040000e-130 477.0
77 TraesCS2B01G261400 chr6B 80.982 652 62 29 5291 5918 109134417 109133804 2.060000e-125 460.0
78 TraesCS2B01G261400 chr6B 85.714 294 29 6 4934 5217 109134740 109134450 1.710000e-76 298.0
79 TraesCS2B01G261400 chr6B 81.277 235 39 4 2195 2429 363714375 363714604 1.390000e-42 185.0
80 TraesCS2B01G261400 chr6B 94.382 89 5 0 3586 3674 109135876 109135788 3.940000e-28 137.0
81 TraesCS2B01G261400 chr6B 85.455 110 12 3 706 811 5886759 5886868 2.390000e-20 111.0
82 TraesCS2B01G261400 chr6B 85.455 110 12 3 706 811 5890840 5890949 2.390000e-20 111.0
83 TraesCS2B01G261400 chr6B 85.455 110 12 3 706 811 5896475 5896584 2.390000e-20 111.0
84 TraesCS2B01G261400 chr6B 93.056 72 5 0 2107 2178 363714330 363714401 1.110000e-18 106.0
85 TraesCS2B01G261400 chr6B 81.395 129 23 1 623 750 563289292 563289420 3.990000e-18 104.0
86 TraesCS2B01G261400 chr6D 89.316 1067 82 18 3879 4929 95713098 95714148 0.000000e+00 1310.0
87 TraesCS2B01G261400 chr6D 90.934 364 17 2 1 348 460077267 460077630 7.350000e-130 475.0
88 TraesCS2B01G261400 chr6D 95.122 246 12 0 1002 1247 16116115 16116360 9.840000e-104 388.0
89 TraesCS2B01G261400 chr6D 83.696 368 35 13 5308 5660 95714577 95714934 2.820000e-84 324.0
90 TraesCS2B01G261400 chr6D 90.533 169 14 2 3362 3529 95712606 95712773 1.060000e-53 222.0
91 TraesCS2B01G261400 chr6D 99.010 101 1 0 3767 3867 163832508 163832608 1.790000e-41 182.0
92 TraesCS2B01G261400 chr6D 94.505 91 5 0 3584 3674 95712961 95713051 3.040000e-29 141.0
93 TraesCS2B01G261400 chrUn 85.924 1023 105 22 3898 4900 121514542 121513539 0.000000e+00 1055.0
94 TraesCS2B01G261400 chrUn 86.375 800 85 9 2436 3217 55681977 55682770 0.000000e+00 852.0
95 TraesCS2B01G261400 chrUn 88.187 364 27 4 1 348 8099734 8099371 3.490000e-113 420.0
96 TraesCS2B01G261400 chrUn 87.117 326 31 5 1870 2194 55681424 55681739 7.720000e-95 359.0
97 TraesCS2B01G261400 chrUn 89.919 248 25 0 2195 2442 55681697 55681944 3.640000e-83 320.0
98 TraesCS2B01G261400 chrUn 86.404 228 17 5 3879 4092 121514768 121514541 3.770000e-58 237.0
99 TraesCS2B01G261400 chrUn 89.216 102 10 1 3574 3674 121514916 121514815 8.520000e-25 126.0
100 TraesCS2B01G261400 chr4A 89.549 842 67 10 2926 3746 327937240 327938081 0.000000e+00 1048.0
101 TraesCS2B01G261400 chr4A 81.947 986 129 29 1248 2194 327759342 327760317 0.000000e+00 789.0
102 TraesCS2B01G261400 chr4A 87.247 494 53 8 2440 2930 327760555 327761041 9.170000e-154 555.0
103 TraesCS2B01G261400 chr4A 83.284 335 14 5 1 319 164444028 164444336 3.720000e-68 270.0
104 TraesCS2B01G261400 chr4A 99.029 103 1 0 3765 3867 109762949 109763051 1.390000e-42 185.0
105 TraesCS2B01G261400 chr4A 100.000 44 0 0 3653 3696 44272690 44272733 1.870000e-11 82.4
106 TraesCS2B01G261400 chr4A 100.000 44 0 0 3653 3696 44654528 44654571 1.870000e-11 82.4
107 TraesCS2B01G261400 chr4A 100.000 44 0 0 3653 3696 44786030 44786073 1.870000e-11 82.4
108 TraesCS2B01G261400 chr1A 88.000 675 62 10 4559 5218 137853903 137853233 0.000000e+00 780.0
109 TraesCS2B01G261400 chr1A 88.426 648 63 10 4289 4932 168718724 168718085 0.000000e+00 771.0
110 TraesCS2B01G261400 chr1A 94.385 374 18 3 876 1247 176408274 176408646 9.110000e-159 571.0
111 TraesCS2B01G261400 chr1A 87.760 384 27 10 3906 4274 168719327 168718949 1.610000e-116 431.0
112 TraesCS2B01G261400 chr1A 78.254 653 72 31 5285 5918 168717655 168717054 9.980000e-94 355.0
113 TraesCS2B01G261400 chr1A 84.478 335 40 8 5257 5589 137853044 137852720 3.640000e-83 320.0
114 TraesCS2B01G261400 chr1A 88.038 209 25 0 5710 5918 137852326 137852118 1.740000e-61 248.0
115 TraesCS2B01G261400 chr1A 89.474 133 13 1 4157 4288 168718948 168718816 5.020000e-37 167.0
116 TraesCS2B01G261400 chr1A 90.196 102 9 1 3574 3674 168740225 168740124 1.830000e-26 132.0
117 TraesCS2B01G261400 chr1A 83.117 77 10 2 2015 2091 557488515 557488442 5.240000e-07 67.6
118 TraesCS2B01G261400 chr7A 93.472 337 20 2 912 1247 629781360 629781025 4.360000e-137 499.0
119 TraesCS2B01G261400 chr7A 95.760 283 12 0 1 283 670866670 670866388 2.660000e-124 457.0
120 TraesCS2B01G261400 chr7A 85.787 197 17 7 5945 6140 424370032 424370218 1.780000e-46 198.0
121 TraesCS2B01G261400 chr7A 100.000 99 0 0 3769 3867 666604608 666604706 4.990000e-42 183.0
122 TraesCS2B01G261400 chr2D 90.110 364 20 4 1 348 160021189 160021552 7.400000e-125 459.0
123 TraesCS2B01G261400 chr2D 85.890 326 34 7 5257 5580 395596451 395596766 3.620000e-88 337.0
124 TraesCS2B01G261400 chr2D 87.624 202 17 3 5029 5223 395596068 395596268 2.270000e-55 228.0
125 TraesCS2B01G261400 chr2D 87.838 148 14 3 5995 6140 395597313 395597458 3.880000e-38 171.0
126 TraesCS2B01G261400 chr2A 85.484 248 34 2 2195 2442 761153541 761153786 2.900000e-64 257.0
127 TraesCS2B01G261400 chr2A 91.765 85 7 0 2107 2191 761153496 761153580 1.430000e-22 119.0
128 TraesCS2B01G261400 chr2A 85.455 110 12 3 706 811 508444570 508444679 2.390000e-20 111.0
129 TraesCS2B01G261400 chr2A 88.679 53 6 0 1459 1511 579938593 579938645 1.880000e-06 65.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G261400 chr2B 333861494 333869582 8088 False 14938.000000 14938 100.000000 1 8089 1 chr2B.!!$F1 8088
1 TraesCS2B01G261400 chr2B 371937547 371938525 978 False 1491.000000 1491 94.207000 7112 8089 1 chr2B.!!$F2 977
2 TraesCS2B01G261400 chr2B 539965583 539966582 999 False 1465.000000 1465 93.234000 7094 8088 1 chr2B.!!$F3 994
3 TraesCS2B01G261400 chr4B 149993726 149994684 958 False 1533.000000 1533 95.521000 6138 7097 1 chr4B.!!$F3 959
4 TraesCS2B01G261400 chr4B 609103286 609105364 2078 True 1526.000000 1541 94.810000 6138 8089 2 chr4B.!!$R9 1951
5 TraesCS2B01G261400 chr4B 531341745 531342751 1006 False 1472.000000 1472 93.261000 7094 8089 1 chr4B.!!$F6 995
6 TraesCS2B01G261400 chr4B 175306061 175307069 1008 True 1463.000000 1463 93.062000 7094 8089 1 chr4B.!!$R3 995
7 TraesCS2B01G261400 chr4B 224969910 224971927 2017 True 1204.500000 1923 88.500000 3372 5504 2 chr4B.!!$R7 2132
8 TraesCS2B01G261400 chr4B 224937279 224940209 2930 True 335.000000 420 89.358500 5577 6140 2 chr4B.!!$R6 563
9 TraesCS2B01G261400 chr4D 366046135 366047092 957 False 1581.000000 1581 96.455000 6138 7096 1 chr4D.!!$F1 958
10 TraesCS2B01G261400 chr4D 139098134 139098974 840 True 1020.000000 1020 88.942000 2926 3746 1 chr4D.!!$R1 820
11 TraesCS2B01G261400 chr4D 139187940 139188979 1039 True 487.000000 599 88.440500 1870 2930 2 chr4D.!!$R4 1060
12 TraesCS2B01G261400 chr4D 139201708 139202348 640 True 477.000000 477 80.710000 1248 1873 1 chr4D.!!$R2 625
13 TraesCS2B01G261400 chr7B 698510963 698511837 874 True 1565.000000 1565 98.971000 1 874 1 chr7B.!!$R3 873
14 TraesCS2B01G261400 chr7B 376346645 376347520 875 False 1524.000000 1524 98.062000 1 876 1 chr7B.!!$F4 875
15 TraesCS2B01G261400 chr7B 356551694 356552663 969 False 1478.000000 1478 94.100000 7112 8089 1 chr7B.!!$F2 977
16 TraesCS2B01G261400 chr7B 246956331 246957310 979 True 1476.000000 1476 93.896000 7112 8089 1 chr7B.!!$R1 977
17 TraesCS2B01G261400 chr5B 209632259 209633217 958 True 1555.000000 1555 95.938000 6138 7097 1 chr5B.!!$R1 959
18 TraesCS2B01G261400 chr6A 197859633 197860591 958 True 1533.000000 1533 95.521000 6138 7096 1 chr6A.!!$R1 958
19 TraesCS2B01G261400 chr3B 371038115 371039072 957 True 1526.000000 1526 95.412000 6138 7096 1 chr3B.!!$R4 958
20 TraesCS2B01G261400 chr3B 585645742 585646890 1148 True 414.000000 628 84.185500 4389 5590 2 chr3B.!!$R7 1201
21 TraesCS2B01G261400 chr3A 361575273 361576230 957 True 1526.000000 1526 95.412000 6138 7096 1 chr3A.!!$R1 958
22 TraesCS2B01G261400 chr1B 148510266 148511248 982 False 1522.000000 1522 94.710000 7112 8089 1 chr1B.!!$F1 977
23 TraesCS2B01G261400 chr1B 385767720 385768593 873 True 1480.000000 1480 97.254000 1 873 1 chr1B.!!$R2 872
24 TraesCS2B01G261400 chr1B 560335800 560336313 513 False 695.000000 695 90.892000 346 871 1 chr1B.!!$F2 525
25 TraesCS2B01G261400 chr1B 223897917 223900527 2610 False 430.000000 1014 86.086600 3362 5918 5 chr1B.!!$F4 2556
26 TraesCS2B01G261400 chr5A 216692664 216693624 960 False 1513.000000 1513 95.114000 6138 7097 1 chr5A.!!$F1 959
27 TraesCS2B01G261400 chr5D 199084944 199085902 958 False 1511.000000 1511 95.109000 6138 7097 1 chr5D.!!$F1 959
28 TraesCS2B01G261400 chr6B 252380931 252381911 980 True 1498.000000 1498 94.399000 7118 8089 1 chr6B.!!$R1 971
29 TraesCS2B01G261400 chr6B 431500423 431501162 739 True 689.000000 689 83.730000 4602 5345 1 chr6B.!!$R2 743
30 TraesCS2B01G261400 chr6B 109133804 109135876 2072 True 514.250000 1162 87.150500 3586 5918 4 chr6B.!!$R3 2332
31 TraesCS2B01G261400 chr6D 95712606 95714934 2328 False 499.250000 1310 89.512500 3362 5660 4 chr6D.!!$F4 2298
32 TraesCS2B01G261400 chrUn 55681424 55682770 1346 False 510.333333 852 87.803667 1870 3217 3 chrUn.!!$F1 1347
33 TraesCS2B01G261400 chrUn 121513539 121514916 1377 True 472.666667 1055 87.181333 3574 4900 3 chrUn.!!$R2 1326
34 TraesCS2B01G261400 chr4A 327937240 327938081 841 False 1048.000000 1048 89.549000 2926 3746 1 chr4A.!!$F6 820
35 TraesCS2B01G261400 chr4A 327759342 327761041 1699 False 672.000000 789 84.597000 1248 2930 2 chr4A.!!$F7 1682
36 TraesCS2B01G261400 chr1A 137852118 137853903 1785 True 449.333333 780 86.838667 4559 5918 3 chr1A.!!$R3 1359
37 TraesCS2B01G261400 chr1A 168717054 168719327 2273 True 431.000000 771 85.978500 3906 5918 4 chr1A.!!$R4 2012
38 TraesCS2B01G261400 chr2D 395596068 395597458 1390 False 245.333333 337 87.117333 5029 6140 3 chr2D.!!$F2 1111

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
898 900 0.317103 CGTGTCCTCATCGTCGGATC 60.317 60.0 0.00 0.00 0.00 3.36 F
1485 1492 0.032130 GATCTCGCGATGGTTAGGCA 59.968 55.0 10.36 0.00 0.00 4.75 F
1779 1803 0.036732 TCTTCCTGCGCTGGTTCATT 59.963 50.0 29.57 0.00 0.00 2.57 F
1810 1834 0.321298 CGACACCAACCAAGGTAGGG 60.321 60.0 7.99 7.99 40.77 3.53 F
1813 1837 0.322546 CACCAACCAAGGTAGGGCTC 60.323 60.0 9.16 0.00 40.77 4.70 F
1928 1975 0.385223 CTTGCTTGCTTCTGTCGTGC 60.385 55.0 0.00 0.00 0.00 5.34 F
3837 4086 0.605589 GGAAGGGTCCGACCACTTTG 60.606 60.0 19.43 0.00 41.02 2.77 F
3867 4116 0.107654 ACGCAGCCTTTCCCTACATC 60.108 55.0 0.00 0.00 0.00 3.06 F
5155 6062 0.601558 ATTCGAGTGGCACGTACTGT 59.398 50.0 12.71 0.00 0.00 3.55 F
5865 9550 0.732571 CTTGGCGTGTGTGTTTGTCT 59.267 50.0 0.00 0.00 0.00 3.41 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1777 1801 0.037605 GTGTCGTTCGTCCAGGGAAT 60.038 55.000 0.00 0.00 0.00 3.01 R
2463 2552 0.745486 TGGCTTCAGATGCATGACCG 60.745 55.000 2.46 0.00 0.00 4.79 R
3488 3598 0.324943 GGCAGGTCACCTAAGCAAGA 59.675 55.000 8.38 0.00 29.64 3.02 R
3525 3635 1.142060 ACACGACAAACCTGATTGGGA 59.858 47.619 0.00 0.00 41.11 4.37 R
3781 4030 1.153086 GGAGCTACATGCACTGGGG 60.153 63.158 0.00 0.00 45.94 4.96 R
3848 4097 0.107654 GATGTAGGGAAAGGCTGCGT 60.108 55.000 0.00 0.00 0.00 5.24 R
5106 6012 0.251916 CTAACCACGGAGATGGGCAA 59.748 55.000 0.00 0.00 44.81 4.52 R
5281 6345 1.014564 CCTCCGTTTCCTCTTGCGAC 61.015 60.000 0.00 0.00 0.00 5.19 R
6136 10010 0.179000 AAGATAAGACCAGCTGCCGG 59.821 55.000 8.66 0.00 0.00 6.13 R
7262 11263 1.217183 TCGATGGCTTAGACCTAGGGT 59.783 52.381 14.81 2.03 39.44 4.34 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
247 248 0.462789 CGTAAGGCTACGGGGACAAT 59.537 55.000 8.13 0.00 45.84 2.71
886 888 4.101448 GGGATGCTGGCGTGTCCT 62.101 66.667 9.90 0.00 35.26 3.85
887 889 2.512515 GGATGCTGGCGTGTCCTC 60.513 66.667 0.00 0.00 35.26 3.71
888 890 2.265739 GATGCTGGCGTGTCCTCA 59.734 61.111 0.00 0.00 35.26 3.86
889 891 1.153289 GATGCTGGCGTGTCCTCAT 60.153 57.895 0.00 0.00 35.26 2.90
890 892 1.153289 ATGCTGGCGTGTCCTCATC 60.153 57.895 0.00 0.00 35.26 2.92
891 893 2.887568 GCTGGCGTGTCCTCATCG 60.888 66.667 0.00 0.00 35.26 3.84
892 894 2.573869 CTGGCGTGTCCTCATCGT 59.426 61.111 0.00 0.00 35.26 3.73
893 895 1.517257 CTGGCGTGTCCTCATCGTC 60.517 63.158 0.00 0.00 35.26 4.20
894 896 2.579787 GGCGTGTCCTCATCGTCG 60.580 66.667 0.00 0.00 0.00 5.12
895 897 2.579787 GCGTGTCCTCATCGTCGG 60.580 66.667 0.00 0.00 0.00 4.79
896 898 3.047718 GCGTGTCCTCATCGTCGGA 62.048 63.158 0.00 0.00 0.00 4.55
897 899 1.728069 CGTGTCCTCATCGTCGGAT 59.272 57.895 0.00 0.00 0.00 4.18
898 900 0.317103 CGTGTCCTCATCGTCGGATC 60.317 60.000 0.00 0.00 0.00 3.36
899 901 1.025812 GTGTCCTCATCGTCGGATCT 58.974 55.000 0.00 0.00 0.00 2.75
900 902 1.405821 GTGTCCTCATCGTCGGATCTT 59.594 52.381 0.00 0.00 0.00 2.40
901 903 1.676529 TGTCCTCATCGTCGGATCTTC 59.323 52.381 0.00 0.00 0.00 2.87
902 904 1.676529 GTCCTCATCGTCGGATCTTCA 59.323 52.381 0.00 0.00 0.00 3.02
903 905 1.676529 TCCTCATCGTCGGATCTTCAC 59.323 52.381 0.00 0.00 0.00 3.18
904 906 1.269309 CCTCATCGTCGGATCTTCACC 60.269 57.143 0.00 0.00 0.00 4.02
905 907 1.678627 CTCATCGTCGGATCTTCACCT 59.321 52.381 0.00 0.00 0.00 4.00
906 908 1.676529 TCATCGTCGGATCTTCACCTC 59.323 52.381 0.00 0.00 0.00 3.85
907 909 0.663688 ATCGTCGGATCTTCACCTCG 59.336 55.000 0.00 0.00 0.00 4.63
908 910 1.586564 CGTCGGATCTTCACCTCGC 60.587 63.158 0.00 0.00 0.00 5.03
909 911 1.810532 GTCGGATCTTCACCTCGCT 59.189 57.895 0.00 0.00 0.00 4.93
910 912 0.526524 GTCGGATCTTCACCTCGCTG 60.527 60.000 0.00 0.00 0.00 5.18
911 913 0.965866 TCGGATCTTCACCTCGCTGT 60.966 55.000 0.00 0.00 0.00 4.40
912 914 0.738975 CGGATCTTCACCTCGCTGTA 59.261 55.000 0.00 0.00 0.00 2.74
913 915 1.134367 CGGATCTTCACCTCGCTGTAA 59.866 52.381 0.00 0.00 0.00 2.41
914 916 2.541556 GGATCTTCACCTCGCTGTAAC 58.458 52.381 0.00 0.00 0.00 2.50
915 917 2.094182 GGATCTTCACCTCGCTGTAACA 60.094 50.000 0.00 0.00 0.00 2.41
916 918 3.585862 GATCTTCACCTCGCTGTAACAA 58.414 45.455 0.00 0.00 0.00 2.83
917 919 3.462483 TCTTCACCTCGCTGTAACAAA 57.538 42.857 0.00 0.00 0.00 2.83
918 920 4.002906 TCTTCACCTCGCTGTAACAAAT 57.997 40.909 0.00 0.00 0.00 2.32
919 921 4.385825 TCTTCACCTCGCTGTAACAAATT 58.614 39.130 0.00 0.00 0.00 1.82
920 922 4.819630 TCTTCACCTCGCTGTAACAAATTT 59.180 37.500 0.00 0.00 0.00 1.82
921 923 5.298276 TCTTCACCTCGCTGTAACAAATTTT 59.702 36.000 0.00 0.00 0.00 1.82
922 924 5.508200 TCACCTCGCTGTAACAAATTTTT 57.492 34.783 0.00 0.00 0.00 1.94
923 925 5.516090 TCACCTCGCTGTAACAAATTTTTC 58.484 37.500 0.00 0.00 0.00 2.29
924 926 5.066634 TCACCTCGCTGTAACAAATTTTTCA 59.933 36.000 0.00 0.00 0.00 2.69
925 927 5.173131 CACCTCGCTGTAACAAATTTTTCAC 59.827 40.000 0.00 0.00 0.00 3.18
926 928 4.679654 CCTCGCTGTAACAAATTTTTCACC 59.320 41.667 0.00 0.00 0.00 4.02
927 929 5.507315 CCTCGCTGTAACAAATTTTTCACCT 60.507 40.000 0.00 0.00 0.00 4.00
928 930 5.516090 TCGCTGTAACAAATTTTTCACCTC 58.484 37.500 0.00 0.00 0.00 3.85
929 931 4.378616 CGCTGTAACAAATTTTTCACCTCG 59.621 41.667 0.00 0.00 0.00 4.63
930 932 4.148174 GCTGTAACAAATTTTTCACCTCGC 59.852 41.667 0.00 0.00 0.00 5.03
931 933 4.283678 TGTAACAAATTTTTCACCTCGCG 58.716 39.130 0.00 0.00 0.00 5.87
932 934 2.415697 ACAAATTTTTCACCTCGCGG 57.584 45.000 6.13 0.00 0.00 6.46
934 936 2.287368 ACAAATTTTTCACCTCGCGGTC 60.287 45.455 6.13 0.00 43.24 4.79
935 937 0.515564 AATTTTTCACCTCGCGGTCG 59.484 50.000 6.13 0.00 43.24 4.79
936 938 0.601841 ATTTTTCACCTCGCGGTCGT 60.602 50.000 6.13 0.00 43.24 4.34
937 939 0.810823 TTTTTCACCTCGCGGTCGTT 60.811 50.000 6.13 0.00 43.24 3.85
938 940 0.810823 TTTTCACCTCGCGGTCGTTT 60.811 50.000 6.13 0.00 43.24 3.60
939 941 0.810823 TTTCACCTCGCGGTCGTTTT 60.811 50.000 6.13 0.00 43.24 2.43
940 942 1.492319 TTCACCTCGCGGTCGTTTTG 61.492 55.000 6.13 0.00 43.24 2.44
941 943 1.952133 CACCTCGCGGTCGTTTTGA 60.952 57.895 6.13 0.00 43.24 2.69
942 944 2.154427 CACCTCGCGGTCGTTTTGAC 62.154 60.000 6.13 0.00 43.24 3.18
951 953 2.050477 GTCGTTTTGACTGGCCAATG 57.950 50.000 7.01 0.00 44.58 2.82
952 954 1.606668 GTCGTTTTGACTGGCCAATGA 59.393 47.619 7.01 0.00 44.58 2.57
953 955 1.606668 TCGTTTTGACTGGCCAATGAC 59.393 47.619 7.01 0.00 0.00 3.06
954 956 1.662876 CGTTTTGACTGGCCAATGACG 60.663 52.381 7.01 8.06 33.26 4.35
955 957 1.606668 GTTTTGACTGGCCAATGACGA 59.393 47.619 7.01 0.00 0.00 4.20
956 958 1.522668 TTTGACTGGCCAATGACGAG 58.477 50.000 7.01 0.00 0.00 4.18
957 959 0.396435 TTGACTGGCCAATGACGAGT 59.604 50.000 7.01 0.00 0.00 4.18
958 960 0.320683 TGACTGGCCAATGACGAGTG 60.321 55.000 7.01 0.00 0.00 3.51
959 961 1.003355 ACTGGCCAATGACGAGTGG 60.003 57.895 7.01 0.00 40.53 4.00
960 962 1.746615 CTGGCCAATGACGAGTGGG 60.747 63.158 7.01 0.00 37.82 4.61
962 964 2.045926 GCCAATGACGAGTGGGCT 60.046 61.111 0.00 0.00 41.39 5.19
963 965 2.109126 GCCAATGACGAGTGGGCTC 61.109 63.158 0.00 0.00 41.39 4.70
979 981 4.634133 TCGCGCCTCGTGTTCGTT 62.634 61.111 0.00 0.00 38.57 3.85
980 982 4.409588 CGCGCCTCGTGTTCGTTG 62.410 66.667 0.00 0.00 38.33 4.10
981 983 4.072088 GCGCCTCGTGTTCGTTGG 62.072 66.667 0.00 0.00 38.33 3.77
982 984 4.072088 CGCCTCGTGTTCGTTGGC 62.072 66.667 13.43 13.43 45.53 4.52
983 985 2.665185 GCCTCGTGTTCGTTGGCT 60.665 61.111 15.08 0.00 45.53 4.75
984 986 2.954753 GCCTCGTGTTCGTTGGCTG 61.955 63.158 15.08 0.00 45.53 4.85
985 987 2.317609 CCTCGTGTTCGTTGGCTGG 61.318 63.158 0.00 0.00 38.33 4.85
986 988 2.280524 TCGTGTTCGTTGGCTGGG 60.281 61.111 0.00 0.00 38.33 4.45
987 989 2.590575 CGTGTTCGTTGGCTGGGT 60.591 61.111 0.00 0.00 0.00 4.51
988 990 2.184167 CGTGTTCGTTGGCTGGGTT 61.184 57.895 0.00 0.00 0.00 4.11
989 991 1.358759 GTGTTCGTTGGCTGGGTTG 59.641 57.895 0.00 0.00 0.00 3.77
990 992 1.826054 TGTTCGTTGGCTGGGTTGG 60.826 57.895 0.00 0.00 0.00 3.77
991 993 2.909965 TTCGTTGGCTGGGTTGGC 60.910 61.111 0.00 0.00 0.00 4.52
997 999 3.680786 GGCTGGGTTGGCCGTTTC 61.681 66.667 0.00 0.00 40.19 2.78
998 1000 3.680786 GCTGGGTTGGCCGTTTCC 61.681 66.667 0.00 0.00 34.97 3.13
999 1001 3.361977 CTGGGTTGGCCGTTTCCG 61.362 66.667 0.00 0.00 34.97 4.30
1003 1005 4.676586 GTTGGCCGTTTCCGCGTG 62.677 66.667 4.92 0.00 0.00 5.34
1004 1006 4.912485 TTGGCCGTTTCCGCGTGA 62.912 61.111 4.92 0.00 0.00 4.35
1005 1007 4.912485 TGGCCGTTTCCGCGTGAA 62.912 61.111 4.92 5.58 0.00 3.18
1006 1008 4.379143 GGCCGTTTCCGCGTGAAC 62.379 66.667 4.92 8.56 31.05 3.18
1007 1009 4.712873 GCCGTTTCCGCGTGAACG 62.713 66.667 26.98 26.98 43.27 3.95
1008 1010 3.031457 CCGTTTCCGCGTGAACGA 61.031 61.111 32.10 11.20 43.02 3.85
1009 1011 2.166985 CGTTTCCGCGTGAACGAC 59.833 61.111 28.82 16.05 43.02 4.34
1010 1012 2.578679 CGTTTCCGCGTGAACGACA 61.579 57.895 28.82 6.81 43.02 4.35
1011 1013 1.083847 GTTTCCGCGTGAACGACAC 60.084 57.895 4.92 0.00 45.11 3.67
1012 1014 1.227031 TTTCCGCGTGAACGACACT 60.227 52.632 4.92 0.00 46.24 3.55
1013 1015 0.806884 TTTCCGCGTGAACGACACTT 60.807 50.000 4.92 0.00 46.24 3.16
1014 1016 0.806884 TTCCGCGTGAACGACACTTT 60.807 50.000 4.92 0.00 46.24 2.66
1015 1017 0.806884 TCCGCGTGAACGACACTTTT 60.807 50.000 4.92 0.00 46.24 2.27
1016 1018 0.382636 CCGCGTGAACGACACTTTTC 60.383 55.000 4.92 0.00 46.24 2.29
1017 1019 0.382636 CGCGTGAACGACACTTTTCC 60.383 55.000 7.10 0.00 46.24 3.13
1018 1020 0.041576 GCGTGAACGACACTTTTCCC 60.042 55.000 7.10 0.00 46.24 3.97
1019 1021 1.292061 CGTGAACGACACTTTTCCCA 58.708 50.000 13.28 0.00 46.24 4.37
1020 1022 1.666700 CGTGAACGACACTTTTCCCAA 59.333 47.619 13.28 0.00 46.24 4.12
1021 1023 2.289547 CGTGAACGACACTTTTCCCAAT 59.710 45.455 13.28 0.00 46.24 3.16
1022 1024 3.606153 CGTGAACGACACTTTTCCCAATC 60.606 47.826 13.28 0.00 46.24 2.67
1023 1025 3.564225 GTGAACGACACTTTTCCCAATCT 59.436 43.478 9.42 0.00 45.13 2.40
1024 1026 3.563808 TGAACGACACTTTTCCCAATCTG 59.436 43.478 0.00 0.00 0.00 2.90
1025 1027 3.208747 ACGACACTTTTCCCAATCTGT 57.791 42.857 0.00 0.00 0.00 3.41
1026 1028 3.551846 ACGACACTTTTCCCAATCTGTT 58.448 40.909 0.00 0.00 0.00 3.16
1027 1029 3.564225 ACGACACTTTTCCCAATCTGTTC 59.436 43.478 0.00 0.00 0.00 3.18
1028 1030 3.815401 CGACACTTTTCCCAATCTGTTCT 59.185 43.478 0.00 0.00 0.00 3.01
1029 1031 4.319766 CGACACTTTTCCCAATCTGTTCTG 60.320 45.833 0.00 0.00 0.00 3.02
1030 1032 3.319122 ACACTTTTCCCAATCTGTTCTGC 59.681 43.478 0.00 0.00 0.00 4.26
1031 1033 2.554032 ACTTTTCCCAATCTGTTCTGCG 59.446 45.455 0.00 0.00 0.00 5.18
1032 1034 2.270352 TTTCCCAATCTGTTCTGCGT 57.730 45.000 0.00 0.00 0.00 5.24
1033 1035 1.522668 TTCCCAATCTGTTCTGCGTG 58.477 50.000 0.00 0.00 0.00 5.34
1034 1036 0.955428 TCCCAATCTGTTCTGCGTGC 60.955 55.000 0.00 0.00 0.00 5.34
1035 1037 0.957395 CCCAATCTGTTCTGCGTGCT 60.957 55.000 0.00 0.00 0.00 4.40
1036 1038 1.675714 CCCAATCTGTTCTGCGTGCTA 60.676 52.381 0.00 0.00 0.00 3.49
1037 1039 1.394917 CCAATCTGTTCTGCGTGCTAC 59.605 52.381 0.00 0.00 0.00 3.58
1038 1040 2.068519 CAATCTGTTCTGCGTGCTACA 58.931 47.619 0.00 0.00 0.00 2.74
1039 1041 1.714794 ATCTGTTCTGCGTGCTACAC 58.285 50.000 0.00 0.00 0.00 2.90
1040 1042 0.387565 TCTGTTCTGCGTGCTACACA 59.612 50.000 0.00 0.00 33.40 3.72
1041 1043 0.508641 CTGTTCTGCGTGCTACACAC 59.491 55.000 0.00 0.00 46.45 3.82
1050 1052 1.359848 GTGCTACACACCCAATCTCG 58.640 55.000 0.00 0.00 44.02 4.04
1051 1053 0.391130 TGCTACACACCCAATCTCGC 60.391 55.000 0.00 0.00 0.00 5.03
1052 1054 0.108138 GCTACACACCCAATCTCGCT 60.108 55.000 0.00 0.00 0.00 4.93
1053 1055 1.927895 CTACACACCCAATCTCGCTC 58.072 55.000 0.00 0.00 0.00 5.03
1054 1056 0.172578 TACACACCCAATCTCGCTCG 59.827 55.000 0.00 0.00 0.00 5.03
1055 1057 2.125512 ACACCCAATCTCGCTCGC 60.126 61.111 0.00 0.00 0.00 5.03
1056 1058 2.125552 CACCCAATCTCGCTCGCA 60.126 61.111 0.00 0.00 0.00 5.10
1057 1059 2.125512 ACCCAATCTCGCTCGCAC 60.126 61.111 0.00 0.00 0.00 5.34
1058 1060 2.125552 CCCAATCTCGCTCGCACA 60.126 61.111 0.00 0.00 0.00 4.57
1059 1061 2.456119 CCCAATCTCGCTCGCACAC 61.456 63.158 0.00 0.00 0.00 3.82
1060 1062 2.456119 CCAATCTCGCTCGCACACC 61.456 63.158 0.00 0.00 0.00 4.16
1061 1063 1.737735 CAATCTCGCTCGCACACCA 60.738 57.895 0.00 0.00 0.00 4.17
1062 1064 1.446792 AATCTCGCTCGCACACCAG 60.447 57.895 0.00 0.00 0.00 4.00
1063 1065 2.842394 AATCTCGCTCGCACACCAGG 62.842 60.000 0.00 0.00 0.00 4.45
1081 1083 4.760047 CGCCGCACAACCCTAGCT 62.760 66.667 0.00 0.00 0.00 3.32
1082 1084 2.820037 GCCGCACAACCCTAGCTC 60.820 66.667 0.00 0.00 0.00 4.09
1083 1085 2.125106 CCGCACAACCCTAGCTCC 60.125 66.667 0.00 0.00 0.00 4.70
1084 1086 2.125106 CGCACAACCCTAGCTCCC 60.125 66.667 0.00 0.00 0.00 4.30
1085 1087 2.954684 CGCACAACCCTAGCTCCCA 61.955 63.158 0.00 0.00 0.00 4.37
1086 1088 1.377333 GCACAACCCTAGCTCCCAC 60.377 63.158 0.00 0.00 0.00 4.61
1087 1089 1.842381 GCACAACCCTAGCTCCCACT 61.842 60.000 0.00 0.00 0.00 4.00
1088 1090 0.693049 CACAACCCTAGCTCCCACTT 59.307 55.000 0.00 0.00 0.00 3.16
1089 1091 1.073923 CACAACCCTAGCTCCCACTTT 59.926 52.381 0.00 0.00 0.00 2.66
1090 1092 1.351350 ACAACCCTAGCTCCCACTTTC 59.649 52.381 0.00 0.00 0.00 2.62
1091 1093 0.992695 AACCCTAGCTCCCACTTTCC 59.007 55.000 0.00 0.00 0.00 3.13
1092 1094 0.914902 ACCCTAGCTCCCACTTTCCC 60.915 60.000 0.00 0.00 0.00 3.97
1093 1095 1.636769 CCCTAGCTCCCACTTTCCCC 61.637 65.000 0.00 0.00 0.00 4.81
1094 1096 0.621862 CCTAGCTCCCACTTTCCCCT 60.622 60.000 0.00 0.00 0.00 4.79
1095 1097 0.833949 CTAGCTCCCACTTTCCCCTC 59.166 60.000 0.00 0.00 0.00 4.30
1096 1098 0.976073 TAGCTCCCACTTTCCCCTCG 60.976 60.000 0.00 0.00 0.00 4.63
1097 1099 2.291043 GCTCCCACTTTCCCCTCGA 61.291 63.158 0.00 0.00 0.00 4.04
1098 1100 1.627297 GCTCCCACTTTCCCCTCGAT 61.627 60.000 0.00 0.00 0.00 3.59
1099 1101 0.466124 CTCCCACTTTCCCCTCGATC 59.534 60.000 0.00 0.00 0.00 3.69
1100 1102 0.981277 TCCCACTTTCCCCTCGATCC 60.981 60.000 0.00 0.00 0.00 3.36
1101 1103 1.271840 CCCACTTTCCCCTCGATCCA 61.272 60.000 0.00 0.00 0.00 3.41
1102 1104 0.107654 CCACTTTCCCCTCGATCCAC 60.108 60.000 0.00 0.00 0.00 4.02
1103 1105 0.905357 CACTTTCCCCTCGATCCACT 59.095 55.000 0.00 0.00 0.00 4.00
1104 1106 0.905357 ACTTTCCCCTCGATCCACTG 59.095 55.000 0.00 0.00 0.00 3.66
1105 1107 0.462759 CTTTCCCCTCGATCCACTGC 60.463 60.000 0.00 0.00 0.00 4.40
1106 1108 1.910580 TTTCCCCTCGATCCACTGCC 61.911 60.000 0.00 0.00 0.00 4.85
1107 1109 3.866582 CCCCTCGATCCACTGCCC 61.867 72.222 0.00 0.00 0.00 5.36
1108 1110 3.866582 CCCTCGATCCACTGCCCC 61.867 72.222 0.00 0.00 0.00 5.80
1109 1111 2.765807 CCTCGATCCACTGCCCCT 60.766 66.667 0.00 0.00 0.00 4.79
1110 1112 2.801631 CCTCGATCCACTGCCCCTC 61.802 68.421 0.00 0.00 0.00 4.30
1111 1113 2.764128 TCGATCCACTGCCCCTCC 60.764 66.667 0.00 0.00 0.00 4.30
1112 1114 3.866582 CGATCCACTGCCCCTCCC 61.867 72.222 0.00 0.00 0.00 4.30
1113 1115 2.367512 GATCCACTGCCCCTCCCT 60.368 66.667 0.00 0.00 0.00 4.20
1114 1116 2.367512 ATCCACTGCCCCTCCCTC 60.368 66.667 0.00 0.00 0.00 4.30
1115 1117 4.741239 TCCACTGCCCCTCCCTCC 62.741 72.222 0.00 0.00 0.00 4.30
1116 1118 4.748798 CCACTGCCCCTCCCTCCT 62.749 72.222 0.00 0.00 0.00 3.69
1117 1119 3.086600 CACTGCCCCTCCCTCCTC 61.087 72.222 0.00 0.00 0.00 3.71
1118 1120 4.423209 ACTGCCCCTCCCTCCTCC 62.423 72.222 0.00 0.00 0.00 4.30
1129 1131 3.827898 CTCCTCCCCGCTCGTCAC 61.828 72.222 0.00 0.00 0.00 3.67
1132 1134 4.135153 CTCCCCGCTCGTCACCAG 62.135 72.222 0.00 0.00 0.00 4.00
1138 1140 4.459089 GCTCGTCACCAGGGCCTC 62.459 72.222 0.95 0.00 0.00 4.70
1139 1141 4.135153 CTCGTCACCAGGGCCTCG 62.135 72.222 0.95 3.66 0.00 4.63
1142 1144 4.767255 GTCACCAGGGCCTCGCTG 62.767 72.222 0.95 0.77 42.81 5.18
1152 1154 4.577246 CCTCGCTGCCGCCTACTC 62.577 72.222 0.00 0.00 0.00 2.59
1153 1155 4.577246 CTCGCTGCCGCCTACTCC 62.577 72.222 0.00 0.00 0.00 3.85
1155 1157 4.577246 CGCTGCCGCCTACTCCTC 62.577 72.222 0.00 0.00 0.00 3.71
1156 1158 4.228567 GCTGCCGCCTACTCCTCC 62.229 72.222 0.00 0.00 0.00 4.30
1157 1159 2.443016 CTGCCGCCTACTCCTCCT 60.443 66.667 0.00 0.00 0.00 3.69
1158 1160 2.442272 TGCCGCCTACTCCTCCTC 60.442 66.667 0.00 0.00 0.00 3.71
1159 1161 3.228017 GCCGCCTACTCCTCCTCC 61.228 72.222 0.00 0.00 0.00 4.30
1160 1162 2.279073 CCGCCTACTCCTCCTCCA 59.721 66.667 0.00 0.00 0.00 3.86
1161 1163 2.128507 CCGCCTACTCCTCCTCCAC 61.129 68.421 0.00 0.00 0.00 4.02
1162 1164 2.128507 CGCCTACTCCTCCTCCACC 61.129 68.421 0.00 0.00 0.00 4.61
1163 1165 1.001760 GCCTACTCCTCCTCCACCA 59.998 63.158 0.00 0.00 0.00 4.17
1164 1166 1.331399 GCCTACTCCTCCTCCACCAC 61.331 65.000 0.00 0.00 0.00 4.16
1165 1167 0.688087 CCTACTCCTCCTCCACCACC 60.688 65.000 0.00 0.00 0.00 4.61
1166 1168 0.041238 CTACTCCTCCTCCACCACCA 59.959 60.000 0.00 0.00 0.00 4.17
1167 1169 0.716591 TACTCCTCCTCCACCACCAT 59.283 55.000 0.00 0.00 0.00 3.55
1168 1170 0.178861 ACTCCTCCTCCACCACCATT 60.179 55.000 0.00 0.00 0.00 3.16
1169 1171 0.254178 CTCCTCCTCCACCACCATTG 59.746 60.000 0.00 0.00 0.00 2.82
1170 1172 1.379044 CCTCCTCCACCACCATTGC 60.379 63.158 0.00 0.00 0.00 3.56
1171 1173 1.687612 CTCCTCCACCACCATTGCT 59.312 57.895 0.00 0.00 0.00 3.91
1172 1174 0.679002 CTCCTCCACCACCATTGCTG 60.679 60.000 0.00 0.00 0.00 4.41
1173 1175 2.345760 CCTCCACCACCATTGCTGC 61.346 63.158 0.00 0.00 0.00 5.25
1174 1176 1.303888 CTCCACCACCATTGCTGCT 60.304 57.895 0.00 0.00 0.00 4.24
1175 1177 0.896940 CTCCACCACCATTGCTGCTT 60.897 55.000 0.00 0.00 0.00 3.91
1176 1178 0.895100 TCCACCACCATTGCTGCTTC 60.895 55.000 0.00 0.00 0.00 3.86
1177 1179 1.588082 CACCACCATTGCTGCTTCC 59.412 57.895 0.00 0.00 0.00 3.46
1178 1180 1.607467 ACCACCATTGCTGCTTCCC 60.607 57.895 0.00 0.00 0.00 3.97
1179 1181 2.353610 CCACCATTGCTGCTTCCCC 61.354 63.158 0.00 0.00 0.00 4.81
1180 1182 1.607178 CACCATTGCTGCTTCCCCA 60.607 57.895 0.00 0.00 0.00 4.96
1181 1183 1.607467 ACCATTGCTGCTTCCCCAC 60.607 57.895 0.00 0.00 0.00 4.61
1182 1184 2.353610 CCATTGCTGCTTCCCCACC 61.354 63.158 0.00 0.00 0.00 4.61
1183 1185 1.304713 CATTGCTGCTTCCCCACCT 60.305 57.895 0.00 0.00 0.00 4.00
1184 1186 1.000396 ATTGCTGCTTCCCCACCTC 60.000 57.895 0.00 0.00 0.00 3.85
1185 1187 2.826777 ATTGCTGCTTCCCCACCTCG 62.827 60.000 0.00 0.00 0.00 4.63
1186 1188 3.706373 GCTGCTTCCCCACCTCGA 61.706 66.667 0.00 0.00 0.00 4.04
1187 1189 2.266055 CTGCTTCCCCACCTCGAC 59.734 66.667 0.00 0.00 0.00 4.20
1188 1190 2.203788 TGCTTCCCCACCTCGACT 60.204 61.111 0.00 0.00 0.00 4.18
1189 1191 1.831652 CTGCTTCCCCACCTCGACTT 61.832 60.000 0.00 0.00 0.00 3.01
1190 1192 1.079057 GCTTCCCCACCTCGACTTC 60.079 63.158 0.00 0.00 0.00 3.01
1191 1193 1.597461 CTTCCCCACCTCGACTTCC 59.403 63.158 0.00 0.00 0.00 3.46
1192 1194 1.900545 CTTCCCCACCTCGACTTCCC 61.901 65.000 0.00 0.00 0.00 3.97
1193 1195 2.284699 CCCCACCTCGACTTCCCT 60.285 66.667 0.00 0.00 0.00 4.20
1194 1196 2.359967 CCCCACCTCGACTTCCCTC 61.360 68.421 0.00 0.00 0.00 4.30
1195 1197 1.305381 CCCACCTCGACTTCCCTCT 60.305 63.158 0.00 0.00 0.00 3.69
1196 1198 1.324005 CCCACCTCGACTTCCCTCTC 61.324 65.000 0.00 0.00 0.00 3.20
1197 1199 0.323908 CCACCTCGACTTCCCTCTCT 60.324 60.000 0.00 0.00 0.00 3.10
1198 1200 1.099689 CACCTCGACTTCCCTCTCTC 58.900 60.000 0.00 0.00 0.00 3.20
1199 1201 0.033894 ACCTCGACTTCCCTCTCTCC 60.034 60.000 0.00 0.00 0.00 3.71
1200 1202 1.098712 CCTCGACTTCCCTCTCTCCG 61.099 65.000 0.00 0.00 0.00 4.63
1201 1203 0.393267 CTCGACTTCCCTCTCTCCGT 60.393 60.000 0.00 0.00 0.00 4.69
1202 1204 0.037877 TCGACTTCCCTCTCTCCGTT 59.962 55.000 0.00 0.00 0.00 4.44
1203 1205 0.171455 CGACTTCCCTCTCTCCGTTG 59.829 60.000 0.00 0.00 0.00 4.10
1204 1206 1.258676 GACTTCCCTCTCTCCGTTGT 58.741 55.000 0.00 0.00 0.00 3.32
1205 1207 1.619332 GACTTCCCTCTCTCCGTTGTT 59.381 52.381 0.00 0.00 0.00 2.83
1206 1208 2.037381 GACTTCCCTCTCTCCGTTGTTT 59.963 50.000 0.00 0.00 0.00 2.83
1207 1209 3.236896 ACTTCCCTCTCTCCGTTGTTTA 58.763 45.455 0.00 0.00 0.00 2.01
1208 1210 3.838903 ACTTCCCTCTCTCCGTTGTTTAT 59.161 43.478 0.00 0.00 0.00 1.40
1209 1211 4.081586 ACTTCCCTCTCTCCGTTGTTTATC 60.082 45.833 0.00 0.00 0.00 1.75
1210 1212 2.764572 TCCCTCTCTCCGTTGTTTATCC 59.235 50.000 0.00 0.00 0.00 2.59
1211 1213 2.481449 CCCTCTCTCCGTTGTTTATCCG 60.481 54.545 0.00 0.00 0.00 4.18
1212 1214 2.481449 CCTCTCTCCGTTGTTTATCCGG 60.481 54.545 0.00 0.00 43.03 5.14
1213 1215 2.165845 CTCTCTCCGTTGTTTATCCGGT 59.834 50.000 0.00 0.00 42.30 5.28
1214 1216 2.165030 TCTCTCCGTTGTTTATCCGGTC 59.835 50.000 0.00 0.00 42.30 4.79
1215 1217 1.894466 TCTCCGTTGTTTATCCGGTCA 59.106 47.619 0.00 0.00 42.30 4.02
1216 1218 2.498481 TCTCCGTTGTTTATCCGGTCAT 59.502 45.455 0.00 0.00 42.30 3.06
1217 1219 2.864343 CTCCGTTGTTTATCCGGTCATC 59.136 50.000 0.00 0.00 42.30 2.92
1218 1220 1.591158 CCGTTGTTTATCCGGTCATCG 59.409 52.381 0.00 5.75 37.00 3.84
1239 1241 4.162690 GCGCCTGGTTCCGGATCT 62.163 66.667 4.15 0.00 0.00 2.75
1240 1242 2.202932 CGCCTGGTTCCGGATCTG 60.203 66.667 4.15 5.10 0.00 2.90
1241 1243 2.190578 GCCTGGTTCCGGATCTGG 59.809 66.667 15.09 15.09 0.00 3.86
1242 1244 2.190578 CCTGGTTCCGGATCTGGC 59.809 66.667 16.48 2.48 0.00 4.85
1243 1245 2.202932 CTGGTTCCGGATCTGGCG 60.203 66.667 16.48 0.00 0.00 5.69
1244 1246 4.467084 TGGTTCCGGATCTGGCGC 62.467 66.667 16.48 10.35 0.00 6.53
1245 1247 4.467084 GGTTCCGGATCTGGCGCA 62.467 66.667 16.48 0.00 0.00 6.09
1246 1248 2.435938 GTTCCGGATCTGGCGCAA 60.436 61.111 16.48 2.17 0.00 4.85
1261 1263 1.885871 GCAACCATCAGGAAGGTGC 59.114 57.895 0.00 0.00 38.37 5.01
1266 1268 1.637553 ACCATCAGGAAGGTGCAAGAT 59.362 47.619 0.00 0.00 36.60 2.40
1292 1294 2.202932 CAATCCACTCCTCCCGCG 60.203 66.667 0.00 0.00 0.00 6.46
1359 1361 0.032813 CCATTCCCCAATCCACAGCT 60.033 55.000 0.00 0.00 0.00 4.24
1366 1368 1.211969 CAATCCACAGCTGCTGCAC 59.788 57.895 28.39 0.00 42.74 4.57
1369 1371 4.655647 CCACAGCTGCTGCACCCT 62.656 66.667 28.39 6.73 42.74 4.34
1382 1384 1.690985 CACCCTCCCTCCTCTTCCC 60.691 68.421 0.00 0.00 0.00 3.97
1395 1397 3.416880 TTCCCCCAATCCCTCGCC 61.417 66.667 0.00 0.00 0.00 5.54
1426 1432 3.756783 CGACCCTCCCCTCCTCCT 61.757 72.222 0.00 0.00 0.00 3.69
1438 1445 0.825840 CTCCTCCTCCATCCGTCCTC 60.826 65.000 0.00 0.00 0.00 3.71
1442 1449 2.196925 CCTCCATCCGTCCTCCTCG 61.197 68.421 0.00 0.00 0.00 4.63
1446 1453 4.458829 ATCCGTCCTCCTCGGCCA 62.459 66.667 2.24 0.00 46.49 5.36
1450 1457 2.833582 GTCCTCCTCGGCCATCGA 60.834 66.667 2.24 0.00 46.77 3.59
1451 1458 2.833582 TCCTCCTCGGCCATCGAC 60.834 66.667 2.24 0.00 43.74 4.20
1453 1460 4.271816 CTCCTCGGCCATCGACGG 62.272 72.222 2.24 0.00 43.74 4.79
1455 1462 4.873129 CCTCGGCCATCGACGGTG 62.873 72.222 2.24 0.00 43.74 4.94
1464 1471 1.736645 ATCGACGGTGCTTGGTTCG 60.737 57.895 0.00 0.00 0.00 3.95
1466 1473 2.372690 CGACGGTGCTTGGTTCGAG 61.373 63.158 0.00 0.00 0.00 4.04
1468 1475 0.389948 GACGGTGCTTGGTTCGAGAT 60.390 55.000 0.00 0.00 0.00 2.75
1470 1477 0.108615 CGGTGCTTGGTTCGAGATCT 60.109 55.000 0.00 0.00 0.00 2.75
1471 1478 1.646189 GGTGCTTGGTTCGAGATCTC 58.354 55.000 13.05 13.05 0.00 2.75
1485 1492 0.032130 GATCTCGCGATGGTTAGGCA 59.968 55.000 10.36 0.00 0.00 4.75
1495 1502 2.750237 GTTAGGCAAGCCCGGTGG 60.750 66.667 7.62 0.00 39.21 4.61
1599 1606 1.379044 CCCATCTTGGAGGTGGTGC 60.379 63.158 6.50 0.00 40.96 5.01
1622 1629 0.249322 CGGCTAGGTACCATTCACCG 60.249 60.000 15.94 15.14 41.21 4.94
1624 1631 1.202498 GGCTAGGTACCATTCACCGTC 60.202 57.143 15.94 0.00 41.21 4.79
1625 1632 1.202498 GCTAGGTACCATTCACCGTCC 60.202 57.143 15.94 0.00 41.21 4.79
1626 1633 1.411612 CTAGGTACCATTCACCGTCCC 59.588 57.143 15.94 0.00 41.21 4.46
1651 1658 2.107141 GGGCTATTCGCTGTCGCT 59.893 61.111 0.00 0.00 39.13 4.93
1653 1660 2.240500 GGCTATTCGCTGTCGCTGG 61.241 63.158 0.00 0.00 39.13 4.85
1662 1686 3.978723 CTGTCGCTGGCCTCACTCG 62.979 68.421 3.32 0.00 0.00 4.18
1722 1746 2.194056 CAGCCAATCGAGCCCCAT 59.806 61.111 0.00 0.00 0.00 4.00
1723 1747 1.451504 CAGCCAATCGAGCCCCATA 59.548 57.895 0.00 0.00 0.00 2.74
1727 1751 0.692476 CCAATCGAGCCCCATATCCA 59.308 55.000 0.00 0.00 0.00 3.41
1758 1782 1.473677 CAAGGAGGATTTTGCATCGCA 59.526 47.619 0.00 0.00 36.47 5.10
1764 1788 2.421424 AGGATTTTGCATCGCAGTCTTC 59.579 45.455 0.00 0.00 40.61 2.87
1766 1790 1.896220 TTTTGCATCGCAGTCTTCCT 58.104 45.000 0.00 0.00 40.61 3.36
1767 1791 1.159285 TTTGCATCGCAGTCTTCCTG 58.841 50.000 0.00 0.00 40.61 3.86
1777 1801 1.301716 GTCTTCCTGCGCTGGTTCA 60.302 57.895 29.57 15.67 0.00 3.18
1779 1803 0.036732 TCTTCCTGCGCTGGTTCATT 59.963 50.000 29.57 0.00 0.00 2.57
1784 1808 1.651240 CTGCGCTGGTTCATTCCCTG 61.651 60.000 9.73 0.00 0.00 4.45
1785 1809 2.409870 GCGCTGGTTCATTCCCTGG 61.410 63.158 0.00 0.00 0.00 4.45
1787 1811 1.026718 CGCTGGTTCATTCCCTGGAC 61.027 60.000 0.00 0.00 31.89 4.02
1799 1823 1.068417 CCTGGACGAACGACACCAA 59.932 57.895 0.14 0.00 31.85 3.67
1810 1834 0.321298 CGACACCAACCAAGGTAGGG 60.321 60.000 7.99 7.99 40.77 3.53
1813 1837 0.322546 CACCAACCAAGGTAGGGCTC 60.323 60.000 9.16 0.00 40.77 4.70
1816 1840 1.280457 CAACCAAGGTAGGGCTCTCT 58.720 55.000 0.00 0.00 0.00 3.10
1830 1854 1.812708 GCTCTCTCTCCTCTCCGTACC 60.813 61.905 0.00 0.00 0.00 3.34
1839 1863 0.460311 CTCTCCGTACCCCACATGAC 59.540 60.000 0.00 0.00 0.00 3.06
1899 1946 2.162809 TGCTTGCTGCTTGTATGATGTG 59.837 45.455 0.00 0.00 43.37 3.21
1903 1950 1.741706 GCTGCTTGTATGATGTGTGCT 59.258 47.619 0.00 0.00 0.00 4.40
1904 1951 2.477357 GCTGCTTGTATGATGTGTGCTG 60.477 50.000 0.00 0.00 0.00 4.41
1905 1952 2.745821 CTGCTTGTATGATGTGTGCTGT 59.254 45.455 0.00 0.00 0.00 4.40
1906 1953 2.485038 TGCTTGTATGATGTGTGCTGTG 59.515 45.455 0.00 0.00 0.00 3.66
1907 1954 2.485426 GCTTGTATGATGTGTGCTGTGT 59.515 45.455 0.00 0.00 0.00 3.72
1908 1955 3.668757 GCTTGTATGATGTGTGCTGTGTG 60.669 47.826 0.00 0.00 0.00 3.82
1909 1956 1.805943 TGTATGATGTGTGCTGTGTGC 59.194 47.619 0.00 0.00 43.25 4.57
1910 1957 2.079158 GTATGATGTGTGCTGTGTGCT 58.921 47.619 0.00 0.00 43.37 4.40
1928 1975 0.385223 CTTGCTTGCTTCTGTCGTGC 60.385 55.000 0.00 0.00 0.00 5.34
1936 1983 2.150809 CTTCTGTCGTGCTGTGTGCG 62.151 60.000 0.00 0.00 46.63 5.34
1953 2000 1.191096 GCGTGTGTTCTTGCTTGTTG 58.809 50.000 0.00 0.00 0.00 3.33
1966 2013 1.473857 CTTGTTGTGTGCGTGCTTGC 61.474 55.000 0.00 0.00 0.00 4.01
1972 2019 4.332637 GTGCGTGCTTGCTGGGTG 62.333 66.667 2.56 0.00 35.36 4.61
1995 2044 4.641645 TCGCTGGGTGTTGGGCTG 62.642 66.667 0.00 0.00 0.00 4.85
2039 2088 5.373222 TGCTTTGTTGTATACTGACCTTGT 58.627 37.500 4.17 0.00 0.00 3.16
2052 2101 1.663702 CCTTGTTGCTTGCTGCTGC 60.664 57.895 8.89 8.89 43.37 5.25
2053 2102 1.362717 CTTGTTGCTTGCTGCTGCT 59.637 52.632 17.00 0.00 43.37 4.24
2054 2103 0.939577 CTTGTTGCTTGCTGCTGCTG 60.940 55.000 17.00 10.41 43.37 4.41
2055 2104 1.385756 TTGTTGCTTGCTGCTGCTGA 61.386 50.000 17.00 4.74 43.37 4.26
2056 2105 1.371389 GTTGCTTGCTGCTGCTGAC 60.371 57.895 17.00 6.28 43.37 3.51
2057 2106 2.558286 TTGCTTGCTGCTGCTGACC 61.558 57.895 17.00 3.56 43.37 4.02
2058 2107 2.672307 GCTTGCTGCTGCTGACCT 60.672 61.111 17.00 0.00 40.48 3.85
2059 2108 1.376424 GCTTGCTGCTGCTGACCTA 60.376 57.895 17.00 0.00 40.48 3.08
2074 2123 2.831526 TGACCTACTGATGTTGCTGCTA 59.168 45.455 0.00 0.00 0.00 3.49
2085 2134 2.905880 GCTGCTATGCTGGCCAGG 60.906 66.667 33.46 18.03 0.00 4.45
2106 2155 2.175202 GAGTGAGTCCAGTGACATCCT 58.825 52.381 0.00 0.00 44.33 3.24
2139 2188 5.184671 AGTCATTGAGGATTTGAAAAGAGGC 59.815 40.000 0.00 0.00 0.00 4.70
2178 2227 5.721000 TGGGGCAGTATTTTGATCTCATTTT 59.279 36.000 0.00 0.00 0.00 1.82
2181 2230 6.532657 GGGCAGTATTTTGATCTCATTTTGTG 59.467 38.462 0.00 0.00 0.00 3.33
2182 2231 7.092716 GGCAGTATTTTGATCTCATTTTGTGT 58.907 34.615 0.00 0.00 0.00 3.72
2183 2232 7.062605 GGCAGTATTTTGATCTCATTTTGTGTG 59.937 37.037 0.00 0.00 0.00 3.82
2184 2233 7.809331 GCAGTATTTTGATCTCATTTTGTGTGA 59.191 33.333 0.00 0.00 35.06 3.58
2185 2234 9.850628 CAGTATTTTGATCTCATTTTGTGTGAT 57.149 29.630 0.00 0.00 42.18 3.06
2186 2235 9.850628 AGTATTTTGATCTCATTTTGTGTGATG 57.149 29.630 0.00 0.00 40.22 3.07
2187 2236 7.591006 ATTTTGATCTCATTTTGTGTGATGC 57.409 32.000 0.00 0.00 40.22 3.91
2188 2237 5.708877 TTGATCTCATTTTGTGTGATGCA 57.291 34.783 0.00 0.00 40.22 3.96
2189 2238 5.907866 TGATCTCATTTTGTGTGATGCAT 57.092 34.783 0.00 0.00 40.22 3.96
2190 2239 6.275494 TGATCTCATTTTGTGTGATGCATT 57.725 33.333 0.00 0.00 40.22 3.56
2191 2240 6.693466 TGATCTCATTTTGTGTGATGCATTT 58.307 32.000 0.00 0.00 40.22 2.32
2192 2241 7.828712 TGATCTCATTTTGTGTGATGCATTTA 58.171 30.769 0.00 0.00 40.22 1.40
2193 2242 8.471609 TGATCTCATTTTGTGTGATGCATTTAT 58.528 29.630 0.00 0.00 40.22 1.40
2194 2243 9.955208 GATCTCATTTTGTGTGATGCATTTATA 57.045 29.630 0.00 0.00 40.22 0.98
2199 2248 9.923786 CATTTTGTGTGATGCATTTATAAATGG 57.076 29.630 30.18 17.18 44.54 3.16
2200 2249 8.489990 TTTTGTGTGATGCATTTATAAATGGG 57.510 30.769 30.18 13.65 44.54 4.00
2201 2250 6.159299 TGTGTGATGCATTTATAAATGGGG 57.841 37.500 30.18 13.05 44.54 4.96
2202 2251 4.990426 GTGTGATGCATTTATAAATGGGGC 59.010 41.667 30.18 20.54 44.54 5.80
2203 2252 4.652881 TGTGATGCATTTATAAATGGGGCA 59.347 37.500 30.18 24.30 44.54 5.36
2204 2253 5.221481 TGTGATGCATTTATAAATGGGGCAG 60.221 40.000 30.18 11.86 44.54 4.85
2205 2254 4.900652 TGATGCATTTATAAATGGGGCAGT 59.099 37.500 30.18 16.42 44.54 4.40
2206 2255 6.015519 GTGATGCATTTATAAATGGGGCAGTA 60.016 38.462 30.18 16.68 44.54 2.74
2207 2256 6.725369 TGATGCATTTATAAATGGGGCAGTAT 59.275 34.615 30.18 14.37 44.54 2.12
2208 2257 6.992664 TGCATTTATAAATGGGGCAGTATT 57.007 33.333 30.18 0.00 44.54 1.89
2209 2258 7.372260 TGCATTTATAAATGGGGCAGTATTT 57.628 32.000 30.18 0.00 44.54 1.40
2210 2259 7.800092 TGCATTTATAAATGGGGCAGTATTTT 58.200 30.769 30.18 0.00 44.54 1.82
2211 2260 7.714377 TGCATTTATAAATGGGGCAGTATTTTG 59.286 33.333 30.18 9.84 44.54 2.44
2212 2261 7.930865 GCATTTATAAATGGGGCAGTATTTTGA 59.069 33.333 30.18 0.00 44.54 2.69
2215 2264 9.432982 TTTATAAATGGGGCAGTATTTTGATCT 57.567 29.630 0.00 0.00 0.00 2.75
2216 2265 5.859205 AAATGGGGCAGTATTTTGATCTC 57.141 39.130 0.00 0.00 0.00 2.75
2217 2266 4.524802 ATGGGGCAGTATTTTGATCTCA 57.475 40.909 0.00 0.00 0.00 3.27
2218 2267 4.524802 TGGGGCAGTATTTTGATCTCAT 57.475 40.909 0.00 0.00 0.00 2.90
2219 2268 4.870636 TGGGGCAGTATTTTGATCTCATT 58.129 39.130 0.00 0.00 0.00 2.57
2220 2269 5.271598 TGGGGCAGTATTTTGATCTCATTT 58.728 37.500 0.00 0.00 0.00 2.32
2221 2270 5.360714 TGGGGCAGTATTTTGATCTCATTTC 59.639 40.000 0.00 0.00 0.00 2.17
2222 2271 5.221322 GGGGCAGTATTTTGATCTCATTTCC 60.221 44.000 0.00 0.00 0.00 3.13
2223 2272 5.360714 GGGCAGTATTTTGATCTCATTTCCA 59.639 40.000 0.00 0.00 0.00 3.53
2244 2293 6.781138 TCCACTGACGCATTTATTATTTGTC 58.219 36.000 0.00 0.00 0.00 3.18
2251 2300 7.067532 ACGCATTTATTATTTGTCGTCTTCA 57.932 32.000 0.00 0.00 0.00 3.02
2290 2340 6.093633 AGTTCGGGTTGCTTTTCTTATATCAC 59.906 38.462 0.00 0.00 0.00 3.06
2311 2361 5.932303 TCACTATTTTGTAGTCTGCTTCACC 59.068 40.000 0.00 0.00 0.00 4.02
2338 2388 4.990526 ACTTGAATGAAGACCCAGATTGT 58.009 39.130 0.00 0.00 35.42 2.71
2340 2390 6.542821 ACTTGAATGAAGACCCAGATTGTTA 58.457 36.000 0.00 0.00 35.42 2.41
2368 2418 2.854963 TGTGAAAGTCATTGAGCTGCT 58.145 42.857 0.00 0.00 0.00 4.24
2390 2440 2.798680 CTACGCGCACTAGAAGATTGT 58.201 47.619 5.73 0.00 0.00 2.71
2399 2449 4.631813 GCACTAGAAGATTGTGTTGGTAGG 59.368 45.833 0.00 0.00 37.04 3.18
2400 2450 5.568825 GCACTAGAAGATTGTGTTGGTAGGA 60.569 44.000 0.00 0.00 37.04 2.94
2463 2552 3.605634 TGCATGGTTACTGGTGTATGTC 58.394 45.455 0.00 0.00 0.00 3.06
2480 2569 0.654683 GTCGGTCATGCATCTGAAGC 59.345 55.000 0.00 0.00 0.00 3.86
2492 2581 3.127721 GCATCTGAAGCCACTTACTTTCC 59.872 47.826 0.00 0.00 0.00 3.13
2500 2589 4.740902 AGCCACTTACTTTCCAGGATTTT 58.259 39.130 0.00 0.00 0.00 1.82
2510 2599 2.930950 TCCAGGATTTTTAGGATGGCG 58.069 47.619 0.00 0.00 0.00 5.69
2578 2667 3.316308 ACAGTTGGTGATTCTGTTTCTGC 59.684 43.478 0.00 0.00 39.00 4.26
2592 2681 4.713553 TGTTTCTGCCTGATGACTTGTTA 58.286 39.130 0.00 0.00 0.00 2.41
2593 2682 5.316167 TGTTTCTGCCTGATGACTTGTTAT 58.684 37.500 0.00 0.00 0.00 1.89
2594 2683 6.472016 TGTTTCTGCCTGATGACTTGTTATA 58.528 36.000 0.00 0.00 0.00 0.98
2595 2684 7.112122 TGTTTCTGCCTGATGACTTGTTATAT 58.888 34.615 0.00 0.00 0.00 0.86
2600 2689 9.276590 TCTGCCTGATGACTTGTTATATTATTG 57.723 33.333 0.00 0.00 0.00 1.90
2601 2690 8.978874 TGCCTGATGACTTGTTATATTATTGT 57.021 30.769 0.00 0.00 0.00 2.71
2659 2748 5.255397 TGGGTAGACATGATTTCAGGTTT 57.745 39.130 0.00 0.00 41.31 3.27
2663 2752 6.378280 GGGTAGACATGATTTCAGGTTTGATT 59.622 38.462 0.00 0.00 41.31 2.57
2672 2761 4.686191 TTCAGGTTTGATTGCAACCATT 57.314 36.364 0.00 0.00 32.79 3.16
2675 2764 5.055812 TCAGGTTTGATTGCAACCATTTTC 58.944 37.500 0.00 0.00 32.79 2.29
2688 2777 6.534793 TGCAACCATTTTCTTCTTCTGTTTTC 59.465 34.615 0.00 0.00 0.00 2.29
2812 2903 4.968719 AGTACCTGATGATGAACCATACCA 59.031 41.667 0.00 0.00 0.00 3.25
2826 2917 5.636903 ACCATACCATAGCAATCTTCAGT 57.363 39.130 0.00 0.00 0.00 3.41
2835 2926 9.632638 ACCATAGCAATCTTCAGTTATAAACAT 57.367 29.630 0.00 0.00 0.00 2.71
2889 2981 8.682128 TTTCTTTACTGTGAACATTTGTGAAC 57.318 30.769 0.00 0.00 0.00 3.18
2900 2992 3.181476 ACATTTGTGAACCTTTGCTGGAC 60.181 43.478 0.00 0.00 0.00 4.02
2902 2994 3.569194 TTGTGAACCTTTGCTGGACTA 57.431 42.857 0.00 0.00 0.00 2.59
2921 3013 5.071923 GGACTACTTGCCCTGGATAAATAGT 59.928 44.000 0.00 0.00 0.00 2.12
2932 3024 6.386927 CCCTGGATAAATAGTAGGGCATGATA 59.613 42.308 0.00 0.00 41.44 2.15
2949 3041 9.125026 GGGCATGATAATTGGTAAATATAGGAG 57.875 37.037 0.00 0.00 0.00 3.69
2992 3084 5.719173 GCCACAAAAAGAGTTATATTGGCA 58.281 37.500 3.93 0.00 45.22 4.92
2999 3091 9.218440 CAAAAAGAGTTATATTGGCAATGGTTT 57.782 29.630 22.57 7.39 0.00 3.27
3013 3105 6.605194 TGGCAATGGTTTCTGCATTTAGTATA 59.395 34.615 0.00 0.00 40.46 1.47
3063 3170 6.205464 TCAAATCTAAAGTCAGAAGTGGCAAG 59.795 38.462 0.00 0.00 0.00 4.01
3080 3187 2.476185 GCAAGTATGTTGTCATCACGGC 60.476 50.000 0.00 0.00 35.70 5.68
3127 3234 6.560253 CCAAACATAGGCACATAGGATTAC 57.440 41.667 0.00 0.00 0.00 1.89
3131 3238 7.857404 AACATAGGCACATAGGATTACTACT 57.143 36.000 0.00 0.00 33.70 2.57
3132 3239 7.469537 ACATAGGCACATAGGATTACTACTC 57.530 40.000 0.00 0.00 33.70 2.59
3133 3240 6.437793 ACATAGGCACATAGGATTACTACTCC 59.562 42.308 0.00 0.00 33.70 3.85
3194 3302 8.932791 TGTGTTCTCGTCTTAAATTTCCTATTC 58.067 33.333 0.00 0.00 0.00 1.75
3196 3304 9.496873 TGTTCTCGTCTTAAATTTCCTATTCAA 57.503 29.630 0.00 0.00 0.00 2.69
3213 3321 7.829211 TCCTATTCAAGTAGTTCAAGGAAATGG 59.171 37.037 0.00 0.00 0.00 3.16
3247 3355 2.158475 TGAAGGCTCCCAGTCAATGTTT 60.158 45.455 0.00 0.00 0.00 2.83
3248 3356 1.915141 AGGCTCCCAGTCAATGTTTG 58.085 50.000 0.00 0.00 0.00 2.93
3254 3364 4.558697 GCTCCCAGTCAATGTTTGGTTTAC 60.559 45.833 5.41 0.00 0.00 2.01
3311 3421 4.747108 GCACCATGTGTACATACTCATCTC 59.253 45.833 0.00 0.00 38.06 2.75
3313 3423 4.345257 ACCATGTGTACATACTCATCTCCC 59.655 45.833 0.00 0.00 38.06 4.30
3318 3428 5.105351 TGTGTACATACTCATCTCCCTGTTG 60.105 44.000 0.00 0.00 0.00 3.33
3377 3487 1.341080 AATTCTTGGGTGCCTTGTGG 58.659 50.000 0.00 0.00 0.00 4.17
3386 3496 0.736053 GTGCCTTGTGGAACGTTTCA 59.264 50.000 4.79 4.79 42.39 2.69
3402 3512 5.163513 ACGTTTCAATTTCAGGCATCATTC 58.836 37.500 0.00 0.00 0.00 2.67
3458 3568 0.679321 TTGTTCTGCACCACACTGCA 60.679 50.000 0.00 0.00 45.06 4.41
3474 3584 5.012239 ACACTGCATCATGTAGGATTTTGT 58.988 37.500 7.73 0.00 34.23 2.83
3488 3598 3.125316 GGATTTTGTCGCTCGTGATCTTT 59.875 43.478 0.00 0.00 0.00 2.52
3525 3635 1.010795 CCCCAATCCTTCTTCCCCTT 58.989 55.000 0.00 0.00 0.00 3.95
3557 3730 4.495184 GGTTTGTCGTGTGTTCTGGTTTAG 60.495 45.833 0.00 0.00 0.00 1.85
3602 3845 1.889170 TGTGTTTTGTGTGAGTGGCAA 59.111 42.857 0.00 0.00 0.00 4.52
3629 3872 5.547276 TGATTGGATTTTTGGAGAAATGGGT 59.453 36.000 0.00 0.00 29.75 4.51
3696 3939 8.990163 AAAGGAACAAGTTCTAGAATTGGTAA 57.010 30.769 21.37 0.00 39.45 2.85
3699 3942 8.847196 AGGAACAAGTTCTAGAATTGGTAAAAC 58.153 33.333 21.37 9.70 39.45 2.43
3735 3979 4.347607 AGTCAAATTGCTTTAGCCCATCT 58.652 39.130 0.00 0.00 41.18 2.90
3778 4027 6.992063 CATCATAGGATGTGTATAAAGGGC 57.008 41.667 9.22 0.00 44.79 5.19
3779 4028 6.475504 CATCATAGGATGTGTATAAAGGGCA 58.524 40.000 9.22 0.00 44.79 5.36
3780 4029 6.114187 TCATAGGATGTGTATAAAGGGCAG 57.886 41.667 0.00 0.00 0.00 4.85
3781 4030 3.214696 AGGATGTGTATAAAGGGCAGC 57.785 47.619 0.00 0.00 0.00 5.25
3782 4031 2.158608 AGGATGTGTATAAAGGGCAGCC 60.159 50.000 1.26 1.26 36.03 4.85
3783 4032 2.230660 GATGTGTATAAAGGGCAGCCC 58.769 52.381 24.90 24.90 45.90 5.19
3794 4043 2.045045 GCAGCCCCAGTGCATGTA 60.045 61.111 0.00 0.00 40.86 2.29
3795 4044 2.117156 GCAGCCCCAGTGCATGTAG 61.117 63.158 0.00 0.00 40.86 2.74
3796 4045 2.117156 CAGCCCCAGTGCATGTAGC 61.117 63.158 0.00 0.00 45.96 3.58
3797 4046 2.273449 GCCCCAGTGCATGTAGCT 59.727 61.111 0.00 0.00 45.94 3.32
3798 4047 1.821332 GCCCCAGTGCATGTAGCTC 60.821 63.158 0.00 0.00 45.94 4.09
3799 4048 1.153086 CCCCAGTGCATGTAGCTCC 60.153 63.158 0.00 0.00 45.94 4.70
3800 4049 1.153086 CCCAGTGCATGTAGCTCCC 60.153 63.158 0.00 0.00 45.94 4.30
3801 4050 1.522355 CCAGTGCATGTAGCTCCCG 60.522 63.158 0.00 0.00 45.94 5.14
3802 4051 2.176273 CAGTGCATGTAGCTCCCGC 61.176 63.158 0.00 0.00 45.94 6.13
3804 4053 1.450312 GTGCATGTAGCTCCCGCTT 60.450 57.895 0.00 0.00 46.47 4.68
3805 4054 1.450134 TGCATGTAGCTCCCGCTTG 60.450 57.895 0.00 0.00 46.47 4.01
3806 4055 2.828128 GCATGTAGCTCCCGCTTGC 61.828 63.158 0.00 0.00 46.47 4.01
3807 4056 2.202932 ATGTAGCTCCCGCTTGCG 60.203 61.111 8.14 8.14 46.47 4.85
3810 4059 4.819761 TAGCTCCCGCTTGCGCAG 62.820 66.667 11.31 6.32 46.47 5.18
3822 4071 4.785453 GCGCAGGGTCTGGGGAAG 62.785 72.222 0.30 0.00 43.28 3.46
3823 4072 4.101448 CGCAGGGTCTGGGGAAGG 62.101 72.222 4.35 0.00 40.11 3.46
3824 4073 3.732849 GCAGGGTCTGGGGAAGGG 61.733 72.222 0.00 0.00 31.21 3.95
3825 4074 2.204151 CAGGGTCTGGGGAAGGGT 60.204 66.667 0.00 0.00 0.00 4.34
3826 4075 2.125225 AGGGTCTGGGGAAGGGTC 59.875 66.667 0.00 0.00 0.00 4.46
3827 4076 3.015753 GGGTCTGGGGAAGGGTCC 61.016 72.222 0.00 0.00 44.10 4.46
3828 4077 3.400054 GGTCTGGGGAAGGGTCCG 61.400 72.222 0.00 0.00 46.04 4.79
3829 4078 2.284405 GTCTGGGGAAGGGTCCGA 60.284 66.667 0.00 0.00 46.04 4.55
3830 4079 2.284405 TCTGGGGAAGGGTCCGAC 60.284 66.667 0.00 0.00 46.04 4.79
3831 4080 3.400054 CTGGGGAAGGGTCCGACC 61.400 72.222 9.30 9.30 46.04 4.79
3832 4081 4.257810 TGGGGAAGGGTCCGACCA 62.258 66.667 19.43 0.00 46.04 4.02
3833 4082 3.714001 GGGGAAGGGTCCGACCAC 61.714 72.222 19.43 8.70 46.04 4.16
3834 4083 2.606826 GGGAAGGGTCCGACCACT 60.607 66.667 19.43 10.80 46.04 4.00
3835 4084 2.222013 GGGAAGGGTCCGACCACTT 61.222 63.158 19.43 17.88 46.04 3.16
3836 4085 1.759236 GGAAGGGTCCGACCACTTT 59.241 57.895 19.43 9.96 41.02 2.66
3837 4086 0.605589 GGAAGGGTCCGACCACTTTG 60.606 60.000 19.43 0.00 41.02 2.77
3838 4087 0.605589 GAAGGGTCCGACCACTTTGG 60.606 60.000 19.43 0.00 41.02 3.28
3839 4088 2.033602 GGGTCCGACCACTTTGGG 59.966 66.667 19.43 0.00 43.37 4.12
3840 4089 2.826003 GGGTCCGACCACTTTGGGT 61.826 63.158 19.43 0.00 43.37 4.51
3850 4099 3.934068 ACCACTTTGGGTCTATTGTACG 58.066 45.455 0.00 0.00 43.37 3.67
3851 4100 2.676342 CCACTTTGGGTCTATTGTACGC 59.324 50.000 0.00 0.00 32.67 4.42
3852 4101 3.331150 CACTTTGGGTCTATTGTACGCA 58.669 45.455 0.00 0.00 37.94 5.24
3853 4102 3.370978 CACTTTGGGTCTATTGTACGCAG 59.629 47.826 0.00 0.00 40.36 5.18
3854 4103 2.018542 TTGGGTCTATTGTACGCAGC 57.981 50.000 0.00 0.00 40.36 5.25
3855 4104 0.177141 TGGGTCTATTGTACGCAGCC 59.823 55.000 0.00 0.00 35.18 4.85
3856 4105 0.464452 GGGTCTATTGTACGCAGCCT 59.536 55.000 0.00 0.00 0.00 4.58
3857 4106 1.134491 GGGTCTATTGTACGCAGCCTT 60.134 52.381 0.00 0.00 0.00 4.35
3858 4107 2.629051 GGTCTATTGTACGCAGCCTTT 58.371 47.619 0.00 0.00 0.00 3.11
3859 4108 2.608090 GGTCTATTGTACGCAGCCTTTC 59.392 50.000 0.00 0.00 0.00 2.62
3860 4109 2.608090 GTCTATTGTACGCAGCCTTTCC 59.392 50.000 0.00 0.00 0.00 3.13
3861 4110 1.940613 CTATTGTACGCAGCCTTTCCC 59.059 52.381 0.00 0.00 0.00 3.97
3862 4111 0.328258 ATTGTACGCAGCCTTTCCCT 59.672 50.000 0.00 0.00 0.00 4.20
3863 4112 0.978151 TTGTACGCAGCCTTTCCCTA 59.022 50.000 0.00 0.00 0.00 3.53
3864 4113 0.248289 TGTACGCAGCCTTTCCCTAC 59.752 55.000 0.00 0.00 0.00 3.18
3865 4114 0.248289 GTACGCAGCCTTTCCCTACA 59.752 55.000 0.00 0.00 0.00 2.74
3866 4115 1.134491 GTACGCAGCCTTTCCCTACAT 60.134 52.381 0.00 0.00 0.00 2.29
3867 4116 0.107654 ACGCAGCCTTTCCCTACATC 60.108 55.000 0.00 0.00 0.00 3.06
3868 4117 1.154205 CGCAGCCTTTCCCTACATCG 61.154 60.000 0.00 0.00 0.00 3.84
3869 4118 0.107654 GCAGCCTTTCCCTACATCGT 60.108 55.000 0.00 0.00 0.00 3.73
3870 4119 1.679032 GCAGCCTTTCCCTACATCGTT 60.679 52.381 0.00 0.00 0.00 3.85
3871 4120 2.711542 CAGCCTTTCCCTACATCGTTT 58.288 47.619 0.00 0.00 0.00 3.60
3872 4121 2.678336 CAGCCTTTCCCTACATCGTTTC 59.322 50.000 0.00 0.00 0.00 2.78
3873 4122 2.572104 AGCCTTTCCCTACATCGTTTCT 59.428 45.455 0.00 0.00 0.00 2.52
3874 4123 3.009143 AGCCTTTCCCTACATCGTTTCTT 59.991 43.478 0.00 0.00 0.00 2.52
3875 4124 3.374367 GCCTTTCCCTACATCGTTTCTTC 59.626 47.826 0.00 0.00 0.00 2.87
3876 4125 4.575885 CCTTTCCCTACATCGTTTCTTCA 58.424 43.478 0.00 0.00 0.00 3.02
3877 4126 5.186198 CCTTTCCCTACATCGTTTCTTCAT 58.814 41.667 0.00 0.00 0.00 2.57
3904 4153 5.682943 TGTGTATGGAAGCACAAAAGTAC 57.317 39.130 0.00 0.00 41.89 2.73
3925 4181 8.488651 AGTACTATCAACAATAAAAAGGGTCG 57.511 34.615 0.00 0.00 0.00 4.79
3936 4192 7.223777 ACAATAAAAAGGGTCGTTTCACATTTG 59.776 33.333 0.00 0.00 0.00 2.32
3945 4201 5.788531 GGTCGTTTCACATTTGTATCGAAAG 59.211 40.000 0.00 0.00 0.00 2.62
3949 4213 9.356433 TCGTTTCACATTTGTATCGAAAGTATA 57.644 29.630 0.00 0.00 0.00 1.47
3983 4253 7.542025 AGCTTAGCAAAAGAATATTGTTCCAG 58.458 34.615 7.07 0.00 0.00 3.86
4002 4272 5.678583 TCCAGGAGAAGAATTAATGCTCTG 58.321 41.667 0.00 0.00 0.00 3.35
4056 4326 9.748708 TCTTTTGTATTCTGGTTCAAGAAAATG 57.251 29.630 0.00 0.00 39.54 2.32
4067 4544 9.612620 CTGGTTCAAGAAAATGTTTACTATGTC 57.387 33.333 0.00 0.00 0.00 3.06
4099 4577 6.414408 AGTAGAATTGAAGAAACGATGCAG 57.586 37.500 0.00 0.00 0.00 4.41
4105 4583 2.877786 TGAAGAAACGATGCAGCTTTCA 59.122 40.909 20.89 11.67 0.00 2.69
4106 4584 3.503363 TGAAGAAACGATGCAGCTTTCAT 59.497 39.130 20.89 13.57 0.00 2.57
4208 4688 7.553760 TGCACTAAGCTTCATGATTCATAGAAA 59.446 33.333 0.00 0.00 45.94 2.52
4215 4695 9.458727 AGCTTCATGATTCATAGAAAGAAAAGA 57.541 29.630 14.84 0.00 0.00 2.52
4270 4963 9.559958 GTTGTGATTTTGTGAGATTTATGTAGG 57.440 33.333 0.00 0.00 0.00 3.18
4318 5103 7.730364 TTAGAACTGAGACCATCTTGAAAAC 57.270 36.000 0.00 0.00 0.00 2.43
4329 5114 5.416952 ACCATCTTGAAAACTATGCTTCCAG 59.583 40.000 0.00 0.00 0.00 3.86
4331 5116 4.655963 TCTTGAAAACTATGCTTCCAGCT 58.344 39.130 0.00 0.00 42.97 4.24
4332 5117 4.456911 TCTTGAAAACTATGCTTCCAGCTG 59.543 41.667 6.78 6.78 42.97 4.24
4333 5118 3.754965 TGAAAACTATGCTTCCAGCTGT 58.245 40.909 13.81 0.00 42.97 4.40
4374 5159 1.467920 CAATCCTGCTGTTTCCCCTC 58.532 55.000 0.00 0.00 0.00 4.30
4550 5336 8.846943 TTATGATACATGGTGCGATTCTTATT 57.153 30.769 0.00 0.00 0.00 1.40
4555 5341 6.024552 ACATGGTGCGATTCTTATTGTTTT 57.975 33.333 0.00 0.00 0.00 2.43
4556 5342 6.092748 ACATGGTGCGATTCTTATTGTTTTC 58.907 36.000 0.00 0.00 0.00 2.29
4557 5343 5.957842 TGGTGCGATTCTTATTGTTTTCT 57.042 34.783 0.00 0.00 0.00 2.52
4558 5344 5.938322 TGGTGCGATTCTTATTGTTTTCTC 58.062 37.500 0.00 0.00 0.00 2.87
4560 5346 6.128282 TGGTGCGATTCTTATTGTTTTCTCTC 60.128 38.462 0.00 0.00 0.00 3.20
4561 5347 6.128282 GGTGCGATTCTTATTGTTTTCTCTCA 60.128 38.462 0.00 0.00 0.00 3.27
4626 5412 8.443937 GTGATACTGAAAACCTTGATTACTGTC 58.556 37.037 0.00 0.00 0.00 3.51
4760 5555 4.096732 ACCATTTTTATGAGCTTGCGTC 57.903 40.909 0.00 0.00 0.00 5.19
4762 5557 3.438360 CATTTTTATGAGCTTGCGTCCC 58.562 45.455 0.00 0.00 0.00 4.46
4812 5607 8.607713 TGATTTGAGGTACCTTCCAAACTAATA 58.392 33.333 23.86 7.87 32.26 0.98
4827 5622 9.189156 TCCAAACTAATATTTAGAAGCTTGCAT 57.811 29.630 2.10 0.00 0.00 3.96
4932 5832 8.939929 CATCTACTTTGACTTGTTGACATGTAT 58.060 33.333 0.00 0.00 34.86 2.29
4946 5846 9.088987 TGTTGACATGTATATATCTAAGGAGCA 57.911 33.333 0.00 0.00 0.00 4.26
4948 5848 9.533831 TTGACATGTATATATCTAAGGAGCAGA 57.466 33.333 0.00 0.00 0.00 4.26
4958 5858 1.902938 AAGGAGCAGAAGGTGAAAGC 58.097 50.000 0.00 0.00 0.00 3.51
4971 5871 3.989817 AGGTGAAAGCGCAAATCAAAATC 59.010 39.130 11.47 0.00 40.95 2.17
5042 5948 5.647658 TGTGTGGTAATTTTCTGAGCCTATG 59.352 40.000 0.00 0.00 0.00 2.23
5045 5951 7.067494 GTGTGGTAATTTTCTGAGCCTATGAAT 59.933 37.037 0.00 0.00 0.00 2.57
5081 5987 4.264253 CAAACTCCTATGGTTGCTGATCA 58.736 43.478 0.00 0.00 0.00 2.92
5106 6012 9.426837 CAATCACAATATTGACCATGAACTTTT 57.573 29.630 22.16 4.01 38.84 2.27
5119 6026 1.886542 GAACTTTTTGCCCATCTCCGT 59.113 47.619 0.00 0.00 0.00 4.69
5128 6035 1.202498 GCCCATCTCCGTGGTTAGTAC 60.202 57.143 0.00 0.00 37.57 2.73
5155 6062 0.601558 ATTCGAGTGGCACGTACTGT 59.398 50.000 12.71 0.00 0.00 3.55
5160 6067 4.742274 TGGCACGTACTGTCACAC 57.258 55.556 0.00 0.00 25.71 3.82
5196 6106 3.067883 TGCTGATGCTCTCTATGACACTC 59.932 47.826 0.00 0.00 40.48 3.51
5198 6108 4.262121 GCTGATGCTCTCTATGACACTCAT 60.262 45.833 0.00 0.00 37.26 2.90
5199 6109 5.197682 TGATGCTCTCTATGACACTCATG 57.802 43.478 0.00 0.00 37.70 3.07
5200 6110 4.038883 TGATGCTCTCTATGACACTCATGG 59.961 45.833 0.00 0.00 37.70 3.66
5203 6113 4.652881 TGCTCTCTATGACACTCATGGATT 59.347 41.667 0.00 0.00 42.26 3.01
5204 6114 5.835280 TGCTCTCTATGACACTCATGGATTA 59.165 40.000 0.00 0.00 42.26 1.75
5222 6148 9.480053 CATGGATTAATGTTTGTCTCTGTTTTT 57.520 29.630 0.00 0.00 0.00 1.94
5263 6327 2.275466 ACCCCTTTGCTACTATGTGGT 58.725 47.619 0.00 0.00 0.00 4.16
5279 6343 7.112122 ACTATGTGGTATTTCATTGAAGCTGA 58.888 34.615 0.00 0.00 0.00 4.26
5281 6345 4.154015 TGTGGTATTTCATTGAAGCTGACG 59.846 41.667 0.00 0.00 0.00 4.35
5305 6370 3.005472 CGCAAGAGGAAACGGAGGATATA 59.995 47.826 0.00 0.00 43.02 0.86
5349 6415 2.959465 AAGGCTGCTTCCTGTAGTTT 57.041 45.000 0.00 0.00 36.38 2.66
5371 6438 2.661537 CACTGCGCCGACAAGTGA 60.662 61.111 17.32 0.00 32.77 3.41
5372 6439 2.356313 ACTGCGCCGACAAGTGAG 60.356 61.111 4.18 0.00 0.00 3.51
5484 6558 9.860650 TGCTCTATAATACCCACATAATTGTTT 57.139 29.630 0.00 0.00 32.34 2.83
5496 6570 8.310382 CCCACATAATTGTTTGTTCTAATTGGA 58.690 33.333 0.00 0.00 32.34 3.53
5504 6578 8.498054 TTGTTTGTTCTAATTGGATTTTTGCA 57.502 26.923 0.00 0.00 0.00 4.08
5523 6610 3.202906 GCACCACAACTTGACAAGTCTA 58.797 45.455 20.81 0.00 41.91 2.59
5529 6616 6.267928 ACCACAACTTGACAAGTCTACTATCT 59.732 38.462 20.81 0.20 41.91 1.98
5618 6705 5.745227 TGAGACTTGGAATGAAAGATACCC 58.255 41.667 0.00 0.00 0.00 3.69
5627 6714 1.004361 AAAGATACCCGGGGCTCCT 59.996 57.895 27.92 13.27 0.00 3.69
5698 7032 7.719633 AGGATAGAATTTGGCAACGTATACAAT 59.280 33.333 0.00 0.00 42.51 2.71
5700 7034 5.890334 AGAATTTGGCAACGTATACAATGG 58.110 37.500 0.00 0.00 42.51 3.16
5720 9311 4.335416 TGGTGGAAGGAAAAGATGCTAAG 58.665 43.478 0.00 0.00 0.00 2.18
5728 9319 3.056607 GGAAAAGATGCTAAGCAAGGCAA 60.057 43.478 0.00 0.00 43.62 4.52
5737 9328 0.773644 AAGCAAGGCAAGGAAGGAGA 59.226 50.000 0.00 0.00 0.00 3.71
5747 9338 5.372066 AGGCAAGGAAGGAGATTCTGATAAT 59.628 40.000 0.00 0.00 38.07 1.28
5751 9342 4.912744 AGGAAGGAGATTCTGATAATGGCT 59.087 41.667 0.00 0.00 38.07 4.75
5865 9550 0.732571 CTTGGCGTGTGTGTTTGTCT 59.267 50.000 0.00 0.00 0.00 3.41
5918 9603 8.372521 CGTATTTTTAGTGGCATGATTTTGAAC 58.627 33.333 0.00 0.00 0.00 3.18
5919 9604 9.423061 GTATTTTTAGTGGCATGATTTTGAACT 57.577 29.630 0.00 0.00 0.00 3.01
5920 9605 7.945033 TTTTTAGTGGCATGATTTTGAACTC 57.055 32.000 0.00 0.00 0.00 3.01
5921 9606 6.899393 TTTAGTGGCATGATTTTGAACTCT 57.101 33.333 0.00 0.00 0.00 3.24
5923 9608 8.579850 TTTAGTGGCATGATTTTGAACTCTAT 57.420 30.769 0.00 0.00 0.00 1.98
5925 9610 7.093322 AGTGGCATGATTTTGAACTCTATTC 57.907 36.000 0.00 0.00 0.00 1.75
5927 9612 8.049117 AGTGGCATGATTTTGAACTCTATTCTA 58.951 33.333 0.00 0.00 0.00 2.10
5928 9613 8.125448 GTGGCATGATTTTGAACTCTATTCTAC 58.875 37.037 0.00 0.00 0.00 2.59
5929 9614 7.283127 TGGCATGATTTTGAACTCTATTCTACC 59.717 37.037 0.00 0.00 0.00 3.18
5930 9615 7.283127 GGCATGATTTTGAACTCTATTCTACCA 59.717 37.037 0.00 0.00 0.00 3.25
5931 9616 8.677300 GCATGATTTTGAACTCTATTCTACCAA 58.323 33.333 0.00 0.00 0.00 3.67
5938 9623 9.958180 TTTGAACTCTATTCTACCAAATCATGA 57.042 29.630 0.00 0.00 0.00 3.07
5982 9855 9.859427 CCAAATTCAAATGTGTATGTACATCTT 57.141 29.630 12.68 0.00 40.24 2.40
6008 9881 6.068461 TGTATACAAAGACAATAAGCCCCA 57.932 37.500 2.20 0.00 0.00 4.96
6009 9882 6.668645 TGTATACAAAGACAATAAGCCCCAT 58.331 36.000 2.20 0.00 0.00 4.00
6010 9883 6.545666 TGTATACAAAGACAATAAGCCCCATG 59.454 38.462 2.20 0.00 0.00 3.66
6011 9884 3.099141 ACAAAGACAATAAGCCCCATGG 58.901 45.455 4.14 4.14 0.00 3.66
6055 9929 8.741101 TTAAATTTGTGTGTCATATGTGCTTC 57.259 30.769 0.00 0.00 0.00 3.86
6077 9951 8.235226 GCTTCCCTGTAACTAAATCAACTAAAC 58.765 37.037 0.00 0.00 0.00 2.01
6081 9955 8.674607 CCCTGTAACTAAATCAACTAAACCATC 58.325 37.037 0.00 0.00 0.00 3.51
6196 10070 4.641989 AGGTCAGTTTTAGCTGCCATTATG 59.358 41.667 0.00 0.00 36.12 1.90
6198 10072 5.105756 GGTCAGTTTTAGCTGCCATTATGTT 60.106 40.000 0.00 0.00 36.49 2.71
6225 10099 8.226819 TCAACAAAGTATTACAAATCACACCA 57.773 30.769 0.00 0.00 0.00 4.17
6252 10128 7.377766 TCAGTTTCAGTTTTGAGTATATGCC 57.622 36.000 0.00 0.00 34.15 4.40
6315 10191 4.599041 CCCTTGTTATTCCTTCACCATCA 58.401 43.478 0.00 0.00 0.00 3.07
6316 10192 5.203528 CCCTTGTTATTCCTTCACCATCAT 58.796 41.667 0.00 0.00 0.00 2.45
6425 10301 7.422465 TGCTCTAAATATTTGCCCATCTTTT 57.578 32.000 11.05 0.00 0.00 2.27
6427 10303 6.638468 GCTCTAAATATTTGCCCATCTTTTCG 59.362 38.462 11.05 0.00 0.00 3.46
6703 10580 2.037511 ACCAAAGGCATGTCATTGTTGG 59.962 45.455 13.66 15.05 39.92 3.77
6734 10611 5.120054 TCAGGATTTGATGGTCATGATGT 57.880 39.130 0.00 0.00 31.07 3.06
6860 10737 7.231317 GCCTAATGACAATGAATTCCATAGGAA 59.769 37.037 2.27 0.30 46.39 3.36
6946 10824 8.985315 ATAGCAATCTCCATTTGTTCAATCTA 57.015 30.769 0.00 0.00 0.00 1.98
6963 10841 9.654663 GTTCAATCTATCTGTAGGTTGTAAAGT 57.345 33.333 7.97 0.00 45.33 2.66
6983 10861 5.392767 AGTGAAAAGAGCTACGAGATTGA 57.607 39.130 0.00 0.00 0.00 2.57
7045 10924 4.985538 TCGAAAAACAAGGGCTAACAAA 57.014 36.364 0.00 0.00 0.00 2.83
7089 10968 8.181904 TCAGTATATCATTACTCATCAGTGCA 57.818 34.615 0.00 0.00 33.62 4.57
7130 11129 7.230309 TGAATGATTGTGATGTTTGTGGTCTTA 59.770 33.333 0.00 0.00 0.00 2.10
7138 11138 7.084486 GTGATGTTTGTGGTCTTATCTTTTCC 58.916 38.462 0.00 0.00 0.00 3.13
7145 11146 7.745620 TGTGGTCTTATCTTTTCCTTTTCTC 57.254 36.000 0.00 0.00 0.00 2.87
7261 11262 1.144057 GGCCGAGATGAACATCCGT 59.856 57.895 10.63 0.00 38.58 4.69
7262 11263 0.387929 GGCCGAGATGAACATCCGTA 59.612 55.000 10.63 0.00 38.58 4.02
7263 11264 1.488527 GCCGAGATGAACATCCGTAC 58.511 55.000 10.63 5.97 38.58 3.67
7267 11268 2.882761 CGAGATGAACATCCGTACCCTA 59.117 50.000 10.63 0.00 38.58 3.53
7310 11312 4.271696 AGAGACGATGTTTCCATGTCAA 57.728 40.909 0.00 0.00 34.40 3.18
7532 11539 9.807921 ATGTAAGATCCCTTTTCTACTTTGAAA 57.192 29.630 0.00 0.00 34.55 2.69
7544 11551 9.445786 TTTTCTACTTTGAAAGAATTTACTGCG 57.554 29.630 12.53 0.00 39.27 5.18
7585 11592 6.769134 TTAGTTCATCATTCAGAGACGGTA 57.231 37.500 0.00 0.00 0.00 4.02
7605 11612 6.373495 ACGGTAGAATATTTTTGTCCTTCACC 59.627 38.462 0.00 0.00 0.00 4.02
7607 11614 6.373495 GGTAGAATATTTTTGTCCTTCACCGT 59.627 38.462 0.00 0.00 0.00 4.83
7616 11623 6.642707 TTTGTCCTTCACCGTTTAAATGAT 57.357 33.333 9.05 0.00 0.00 2.45
7636 11643 3.394674 TCATTGCGTAGTCCTTCACAA 57.605 42.857 0.00 0.00 0.00 3.33
7637 11644 3.734463 TCATTGCGTAGTCCTTCACAAA 58.266 40.909 0.00 0.00 0.00 2.83
7761 11768 4.774726 TCATAATGAGAGAGGGGTATGCTC 59.225 45.833 0.00 0.00 0.00 4.26
7762 11769 3.342926 AATGAGAGAGGGGTATGCTCT 57.657 47.619 0.00 0.00 41.42 4.09
7763 11770 2.856760 TGAGAGAGGGGTATGCTCTT 57.143 50.000 0.00 0.00 39.00 2.85
7764 11771 2.672098 TGAGAGAGGGGTATGCTCTTC 58.328 52.381 0.00 0.00 39.00 2.87
7765 11772 2.246067 TGAGAGAGGGGTATGCTCTTCT 59.754 50.000 0.00 0.00 39.00 2.85
7766 11773 2.890945 GAGAGAGGGGTATGCTCTTCTC 59.109 54.545 13.98 13.98 39.00 2.87
7838 11867 9.132521 GAAAAACTCTGGATATGTGTTTGAATG 57.867 33.333 0.00 0.00 33.35 2.67
7937 11970 3.070018 GCGCATATGGATTTAGCAGACT 58.930 45.455 0.30 0.00 0.00 3.24
7938 11971 3.120408 GCGCATATGGATTTAGCAGACTG 60.120 47.826 0.30 0.00 0.00 3.51
8010 12043 0.447406 TCATCGCGAACATGGCTTTG 59.553 50.000 15.24 3.09 0.00 2.77
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
503 504 2.912025 CGGCCTGGCTTTGGTTGT 60.912 61.111 19.68 0.00 0.00 3.32
876 878 2.571757 GACGATGAGGACACGCCA 59.428 61.111 0.00 0.00 40.02 5.69
877 879 2.579787 CGACGATGAGGACACGCC 60.580 66.667 0.00 0.00 0.00 5.68
878 880 2.337749 ATCCGACGATGAGGACACGC 62.338 60.000 0.00 0.00 39.66 5.34
879 881 0.317103 GATCCGACGATGAGGACACG 60.317 60.000 0.00 0.00 39.66 4.49
880 882 1.025812 AGATCCGACGATGAGGACAC 58.974 55.000 0.00 0.00 39.66 3.67
881 883 1.676529 GAAGATCCGACGATGAGGACA 59.323 52.381 0.00 0.00 39.66 4.02
882 884 1.676529 TGAAGATCCGACGATGAGGAC 59.323 52.381 0.00 0.00 39.66 3.85
883 885 1.676529 GTGAAGATCCGACGATGAGGA 59.323 52.381 0.00 0.00 41.30 3.71
884 886 1.269309 GGTGAAGATCCGACGATGAGG 60.269 57.143 0.00 0.00 0.00 3.86
885 887 1.678627 AGGTGAAGATCCGACGATGAG 59.321 52.381 0.00 0.00 0.00 2.90
886 888 1.676529 GAGGTGAAGATCCGACGATGA 59.323 52.381 0.00 0.00 0.00 2.92
887 889 1.598183 CGAGGTGAAGATCCGACGATG 60.598 57.143 0.00 0.00 34.12 3.84
888 890 0.663688 CGAGGTGAAGATCCGACGAT 59.336 55.000 0.00 0.00 34.12 3.73
889 891 1.989966 GCGAGGTGAAGATCCGACGA 61.990 60.000 0.00 0.00 34.12 4.20
890 892 1.586564 GCGAGGTGAAGATCCGACG 60.587 63.158 0.00 0.00 34.81 5.12
891 893 0.526524 CAGCGAGGTGAAGATCCGAC 60.527 60.000 0.00 0.00 0.00 4.79
892 894 0.965866 ACAGCGAGGTGAAGATCCGA 60.966 55.000 9.41 0.00 0.00 4.55
893 895 0.738975 TACAGCGAGGTGAAGATCCG 59.261 55.000 9.41 0.00 0.00 4.18
894 896 2.094182 TGTTACAGCGAGGTGAAGATCC 60.094 50.000 9.41 0.00 0.00 3.36
895 897 3.232213 TGTTACAGCGAGGTGAAGATC 57.768 47.619 9.41 0.00 0.00 2.75
896 898 3.678056 TTGTTACAGCGAGGTGAAGAT 57.322 42.857 9.41 0.00 0.00 2.40
897 899 3.462483 TTTGTTACAGCGAGGTGAAGA 57.538 42.857 9.41 0.00 0.00 2.87
898 900 4.749245 AATTTGTTACAGCGAGGTGAAG 57.251 40.909 9.41 0.00 0.00 3.02
899 901 5.508200 AAAATTTGTTACAGCGAGGTGAA 57.492 34.783 9.41 0.00 0.00 3.18
900 902 5.066634 TGAAAAATTTGTTACAGCGAGGTGA 59.933 36.000 9.41 0.00 0.00 4.02
901 903 5.173131 GTGAAAAATTTGTTACAGCGAGGTG 59.827 40.000 0.00 0.26 0.00 4.00
902 904 5.278604 GTGAAAAATTTGTTACAGCGAGGT 58.721 37.500 0.00 0.00 0.00 3.85
903 905 4.679654 GGTGAAAAATTTGTTACAGCGAGG 59.320 41.667 5.71 0.00 0.00 4.63
904 906 5.519722 AGGTGAAAAATTTGTTACAGCGAG 58.480 37.500 5.71 0.00 0.00 5.03
905 907 5.508200 AGGTGAAAAATTTGTTACAGCGA 57.492 34.783 5.71 0.00 0.00 4.93
906 908 4.378616 CGAGGTGAAAAATTTGTTACAGCG 59.621 41.667 5.71 4.61 0.00 5.18
907 909 4.148174 GCGAGGTGAAAAATTTGTTACAGC 59.852 41.667 5.71 4.34 0.00 4.40
908 910 4.378616 CGCGAGGTGAAAAATTTGTTACAG 59.621 41.667 0.00 0.00 0.00 2.74
909 911 4.283678 CGCGAGGTGAAAAATTTGTTACA 58.716 39.130 0.00 0.00 0.00 2.41
910 912 4.861665 CGCGAGGTGAAAAATTTGTTAC 57.138 40.909 0.00 0.00 0.00 2.50
926 928 1.487231 CAGTCAAAACGACCGCGAG 59.513 57.895 8.23 0.00 46.69 5.03
927 929 1.952133 CCAGTCAAAACGACCGCGA 60.952 57.895 8.23 0.00 46.69 5.87
928 930 2.549282 CCAGTCAAAACGACCGCG 59.451 61.111 0.00 0.00 46.69 6.46
929 931 2.251371 GCCAGTCAAAACGACCGC 59.749 61.111 0.00 0.00 46.69 5.68
930 932 1.440938 TTGGCCAGTCAAAACGACCG 61.441 55.000 5.11 0.00 46.69 4.79
931 933 0.958822 ATTGGCCAGTCAAAACGACC 59.041 50.000 5.11 0.00 46.69 4.79
932 934 1.606668 TCATTGGCCAGTCAAAACGAC 59.393 47.619 5.11 0.00 45.77 4.34
933 935 1.606668 GTCATTGGCCAGTCAAAACGA 59.393 47.619 5.11 0.00 0.00 3.85
934 936 1.662876 CGTCATTGGCCAGTCAAAACG 60.663 52.381 5.11 8.09 35.34 3.60
935 937 1.606668 TCGTCATTGGCCAGTCAAAAC 59.393 47.619 5.11 0.00 0.00 2.43
936 938 1.879380 CTCGTCATTGGCCAGTCAAAA 59.121 47.619 5.11 0.00 0.00 2.44
937 939 1.202758 ACTCGTCATTGGCCAGTCAAA 60.203 47.619 5.11 0.00 0.00 2.69
938 940 0.396435 ACTCGTCATTGGCCAGTCAA 59.604 50.000 5.11 0.00 0.00 3.18
939 941 0.320683 CACTCGTCATTGGCCAGTCA 60.321 55.000 5.11 0.00 0.00 3.41
940 942 1.021390 CCACTCGTCATTGGCCAGTC 61.021 60.000 5.11 0.00 0.00 3.51
941 943 1.003355 CCACTCGTCATTGGCCAGT 60.003 57.895 5.11 0.00 0.00 4.00
942 944 1.746615 CCCACTCGTCATTGGCCAG 60.747 63.158 5.11 0.00 0.00 4.85
943 945 2.350895 CCCACTCGTCATTGGCCA 59.649 61.111 0.00 0.00 0.00 5.36
944 946 3.134127 GCCCACTCGTCATTGGCC 61.134 66.667 0.00 0.00 36.07 5.36
945 947 2.045926 AGCCCACTCGTCATTGGC 60.046 61.111 0.00 0.00 42.48 4.52
946 948 4.208632 GAGCCCACTCGTCATTGG 57.791 61.111 0.00 0.00 32.04 3.16
962 964 4.634133 AACGAACACGAGGCGCGA 62.634 61.111 19.52 0.00 44.57 5.87
964 966 4.072088 CCAACGAACACGAGGCGC 62.072 66.667 0.00 0.00 0.00 6.53
965 967 4.072088 GCCAACGAACACGAGGCG 62.072 66.667 12.50 0.00 39.80 5.52
966 968 2.665185 AGCCAACGAACACGAGGC 60.665 61.111 17.18 17.18 44.62 4.70
967 969 2.317609 CCAGCCAACGAACACGAGG 61.318 63.158 0.00 0.00 0.00 4.63
968 970 2.317609 CCCAGCCAACGAACACGAG 61.318 63.158 0.00 0.00 0.00 4.18
969 971 2.280524 CCCAGCCAACGAACACGA 60.281 61.111 0.00 0.00 0.00 4.35
970 972 2.184167 AACCCAGCCAACGAACACG 61.184 57.895 0.00 0.00 0.00 4.49
971 973 1.358759 CAACCCAGCCAACGAACAC 59.641 57.895 0.00 0.00 0.00 3.32
972 974 1.826054 CCAACCCAGCCAACGAACA 60.826 57.895 0.00 0.00 0.00 3.18
973 975 3.039134 CCAACCCAGCCAACGAAC 58.961 61.111 0.00 0.00 0.00 3.95
974 976 2.909965 GCCAACCCAGCCAACGAA 60.910 61.111 0.00 0.00 0.00 3.85
981 983 3.680786 GGAAACGGCCAACCCAGC 61.681 66.667 2.24 0.00 0.00 4.85
992 994 2.722281 GTGTCGTTCACGCGGAAACG 62.722 60.000 30.20 30.20 46.84 3.60
993 995 1.083847 GTGTCGTTCACGCGGAAAC 60.084 57.895 12.47 13.33 37.23 2.78
994 996 3.311710 GTGTCGTTCACGCGGAAA 58.688 55.556 12.47 0.14 37.23 3.13
1001 1003 3.564225 AGATTGGGAAAAGTGTCGTTCAC 59.436 43.478 5.62 5.62 46.46 3.18
1002 1004 3.563808 CAGATTGGGAAAAGTGTCGTTCA 59.436 43.478 0.00 0.00 0.00 3.18
1003 1005 3.564225 ACAGATTGGGAAAAGTGTCGTTC 59.436 43.478 0.00 0.00 0.00 3.95
1004 1006 3.551846 ACAGATTGGGAAAAGTGTCGTT 58.448 40.909 0.00 0.00 0.00 3.85
1005 1007 3.208747 ACAGATTGGGAAAAGTGTCGT 57.791 42.857 0.00 0.00 0.00 4.34
1006 1008 3.815401 AGAACAGATTGGGAAAAGTGTCG 59.185 43.478 0.00 0.00 0.00 4.35
1007 1009 4.557496 GCAGAACAGATTGGGAAAAGTGTC 60.557 45.833 0.00 0.00 0.00 3.67
1008 1010 3.319122 GCAGAACAGATTGGGAAAAGTGT 59.681 43.478 0.00 0.00 0.00 3.55
1009 1011 3.610114 CGCAGAACAGATTGGGAAAAGTG 60.610 47.826 0.00 0.00 0.00 3.16
1010 1012 2.554032 CGCAGAACAGATTGGGAAAAGT 59.446 45.455 0.00 0.00 0.00 2.66
1011 1013 2.554032 ACGCAGAACAGATTGGGAAAAG 59.446 45.455 0.00 0.00 0.00 2.27
1012 1014 2.293122 CACGCAGAACAGATTGGGAAAA 59.707 45.455 0.00 0.00 0.00 2.29
1013 1015 1.879380 CACGCAGAACAGATTGGGAAA 59.121 47.619 0.00 0.00 0.00 3.13
1014 1016 1.522668 CACGCAGAACAGATTGGGAA 58.477 50.000 0.00 0.00 0.00 3.97
1015 1017 0.955428 GCACGCAGAACAGATTGGGA 60.955 55.000 0.00 0.00 0.00 4.37
1016 1018 0.957395 AGCACGCAGAACAGATTGGG 60.957 55.000 0.00 0.00 0.00 4.12
1017 1019 1.394917 GTAGCACGCAGAACAGATTGG 59.605 52.381 0.00 0.00 0.00 3.16
1018 1020 2.068519 TGTAGCACGCAGAACAGATTG 58.931 47.619 0.00 0.00 0.00 2.67
1019 1021 2.069273 GTGTAGCACGCAGAACAGATT 58.931 47.619 0.00 0.00 0.00 2.40
1020 1022 1.000843 TGTGTAGCACGCAGAACAGAT 59.999 47.619 0.00 0.00 37.14 2.90
1021 1023 0.387565 TGTGTAGCACGCAGAACAGA 59.612 50.000 0.00 0.00 37.14 3.41
1022 1024 0.508641 GTGTGTAGCACGCAGAACAG 59.491 55.000 7.80 0.00 43.40 3.16
1023 1025 2.600388 GTGTGTAGCACGCAGAACA 58.400 52.632 7.80 0.00 43.40 3.18
1031 1033 1.359848 CGAGATTGGGTGTGTAGCAC 58.640 55.000 0.00 0.00 46.97 4.40
1032 1034 0.391130 GCGAGATTGGGTGTGTAGCA 60.391 55.000 0.00 0.00 0.00 3.49
1033 1035 0.108138 AGCGAGATTGGGTGTGTAGC 60.108 55.000 0.00 0.00 0.00 3.58
1034 1036 1.799181 CGAGCGAGATTGGGTGTGTAG 60.799 57.143 0.00 0.00 0.00 2.74
1035 1037 0.172578 CGAGCGAGATTGGGTGTGTA 59.827 55.000 0.00 0.00 0.00 2.90
1036 1038 1.079819 CGAGCGAGATTGGGTGTGT 60.080 57.895 0.00 0.00 0.00 3.72
1037 1039 2.456119 GCGAGCGAGATTGGGTGTG 61.456 63.158 0.00 0.00 0.00 3.82
1038 1040 2.125512 GCGAGCGAGATTGGGTGT 60.126 61.111 0.00 0.00 0.00 4.16
1039 1041 2.125552 TGCGAGCGAGATTGGGTG 60.126 61.111 0.00 0.00 0.00 4.61
1040 1042 2.125512 GTGCGAGCGAGATTGGGT 60.126 61.111 0.00 0.00 0.00 4.51
1041 1043 2.125552 TGTGCGAGCGAGATTGGG 60.126 61.111 0.00 0.00 0.00 4.12
1042 1044 2.456119 GGTGTGCGAGCGAGATTGG 61.456 63.158 0.00 0.00 0.00 3.16
1043 1045 1.690283 CTGGTGTGCGAGCGAGATTG 61.690 60.000 0.00 0.00 0.00 2.67
1044 1046 1.446792 CTGGTGTGCGAGCGAGATT 60.447 57.895 0.00 0.00 0.00 2.40
1045 1047 2.182791 CTGGTGTGCGAGCGAGAT 59.817 61.111 0.00 0.00 0.00 2.75
1046 1048 4.056125 CCTGGTGTGCGAGCGAGA 62.056 66.667 0.00 0.00 0.00 4.04
1064 1066 4.760047 AGCTAGGGTTGTGCGGCG 62.760 66.667 0.51 0.51 0.00 6.46
1065 1067 2.820037 GAGCTAGGGTTGTGCGGC 60.820 66.667 0.00 0.00 0.00 6.53
1066 1068 2.125106 GGAGCTAGGGTTGTGCGG 60.125 66.667 0.00 0.00 0.00 5.69
1067 1069 2.125106 GGGAGCTAGGGTTGTGCG 60.125 66.667 0.00 0.00 0.00 5.34
1068 1070 1.377333 GTGGGAGCTAGGGTTGTGC 60.377 63.158 0.00 0.00 0.00 4.57
1069 1071 0.693049 AAGTGGGAGCTAGGGTTGTG 59.307 55.000 0.00 0.00 0.00 3.33
1070 1072 1.351350 GAAAGTGGGAGCTAGGGTTGT 59.649 52.381 0.00 0.00 0.00 3.32
1071 1073 1.340114 GGAAAGTGGGAGCTAGGGTTG 60.340 57.143 0.00 0.00 0.00 3.77
1072 1074 0.992695 GGAAAGTGGGAGCTAGGGTT 59.007 55.000 0.00 0.00 0.00 4.11
1073 1075 0.914902 GGGAAAGTGGGAGCTAGGGT 60.915 60.000 0.00 0.00 0.00 4.34
1074 1076 1.636769 GGGGAAAGTGGGAGCTAGGG 61.637 65.000 0.00 0.00 0.00 3.53
1075 1077 0.621862 AGGGGAAAGTGGGAGCTAGG 60.622 60.000 0.00 0.00 0.00 3.02
1076 1078 0.833949 GAGGGGAAAGTGGGAGCTAG 59.166 60.000 0.00 0.00 0.00 3.42
1077 1079 0.976073 CGAGGGGAAAGTGGGAGCTA 60.976 60.000 0.00 0.00 0.00 3.32
1078 1080 2.294078 CGAGGGGAAAGTGGGAGCT 61.294 63.158 0.00 0.00 0.00 4.09
1079 1081 1.627297 ATCGAGGGGAAAGTGGGAGC 61.627 60.000 0.00 0.00 0.00 4.70
1080 1082 0.466124 GATCGAGGGGAAAGTGGGAG 59.534 60.000 0.00 0.00 0.00 4.30
1081 1083 0.981277 GGATCGAGGGGAAAGTGGGA 60.981 60.000 0.00 0.00 0.00 4.37
1082 1084 1.271840 TGGATCGAGGGGAAAGTGGG 61.272 60.000 0.00 0.00 0.00 4.61
1083 1085 0.107654 GTGGATCGAGGGGAAAGTGG 60.108 60.000 0.00 0.00 0.00 4.00
1084 1086 0.905357 AGTGGATCGAGGGGAAAGTG 59.095 55.000 0.00 0.00 0.00 3.16
1085 1087 0.905357 CAGTGGATCGAGGGGAAAGT 59.095 55.000 0.00 0.00 0.00 2.66
1086 1088 0.462759 GCAGTGGATCGAGGGGAAAG 60.463 60.000 0.00 0.00 0.00 2.62
1087 1089 1.602237 GCAGTGGATCGAGGGGAAA 59.398 57.895 0.00 0.00 0.00 3.13
1088 1090 2.367202 GGCAGTGGATCGAGGGGAA 61.367 63.158 0.00 0.00 0.00 3.97
1089 1091 2.764128 GGCAGTGGATCGAGGGGA 60.764 66.667 0.00 0.00 0.00 4.81
1090 1092 3.866582 GGGCAGTGGATCGAGGGG 61.867 72.222 0.00 0.00 0.00 4.79
1091 1093 3.866582 GGGGCAGTGGATCGAGGG 61.867 72.222 0.00 0.00 0.00 4.30
1092 1094 2.765807 AGGGGCAGTGGATCGAGG 60.766 66.667 0.00 0.00 0.00 4.63
1093 1095 2.801631 GGAGGGGCAGTGGATCGAG 61.802 68.421 0.00 0.00 0.00 4.04
1094 1096 2.764128 GGAGGGGCAGTGGATCGA 60.764 66.667 0.00 0.00 0.00 3.59
1095 1097 3.866582 GGGAGGGGCAGTGGATCG 61.867 72.222 0.00 0.00 0.00 3.69
1096 1098 2.367512 AGGGAGGGGCAGTGGATC 60.368 66.667 0.00 0.00 0.00 3.36
1097 1099 2.367512 GAGGGAGGGGCAGTGGAT 60.368 66.667 0.00 0.00 0.00 3.41
1098 1100 4.741239 GGAGGGAGGGGCAGTGGA 62.741 72.222 0.00 0.00 0.00 4.02
1099 1101 4.748798 AGGAGGGAGGGGCAGTGG 62.749 72.222 0.00 0.00 0.00 4.00
1100 1102 3.086600 GAGGAGGGAGGGGCAGTG 61.087 72.222 0.00 0.00 0.00 3.66
1101 1103 4.423209 GGAGGAGGGAGGGGCAGT 62.423 72.222 0.00 0.00 0.00 4.40
1112 1114 3.827898 GTGACGAGCGGGGAGGAG 61.828 72.222 0.00 0.00 0.00 3.69
1115 1117 4.135153 CTGGTGACGAGCGGGGAG 62.135 72.222 0.00 0.00 0.00 4.30
1121 1123 4.459089 GAGGCCCTGGTGACGAGC 62.459 72.222 0.00 0.00 0.00 5.03
1122 1124 4.135153 CGAGGCCCTGGTGACGAG 62.135 72.222 0.00 0.00 0.00 4.18
1125 1127 4.767255 CAGCGAGGCCCTGGTGAC 62.767 72.222 16.76 0.00 35.69 3.67
1135 1137 4.577246 GAGTAGGCGGCAGCGAGG 62.577 72.222 13.08 0.00 46.35 4.63
1136 1138 4.577246 GGAGTAGGCGGCAGCGAG 62.577 72.222 13.08 0.00 46.35 5.03
1138 1140 4.577246 GAGGAGTAGGCGGCAGCG 62.577 72.222 13.08 0.00 46.35 5.18
1139 1141 4.228567 GGAGGAGTAGGCGGCAGC 62.229 72.222 13.08 0.00 44.18 5.25
1140 1142 2.443016 AGGAGGAGTAGGCGGCAG 60.443 66.667 13.08 0.00 0.00 4.85
1141 1143 2.442272 GAGGAGGAGTAGGCGGCA 60.442 66.667 13.08 0.00 0.00 5.69
1142 1144 3.228017 GGAGGAGGAGTAGGCGGC 61.228 72.222 0.00 0.00 0.00 6.53
1143 1145 2.128507 GTGGAGGAGGAGTAGGCGG 61.129 68.421 0.00 0.00 0.00 6.13
1144 1146 2.128507 GGTGGAGGAGGAGTAGGCG 61.129 68.421 0.00 0.00 0.00 5.52
1145 1147 1.001760 TGGTGGAGGAGGAGTAGGC 59.998 63.158 0.00 0.00 0.00 3.93
1146 1148 0.688087 GGTGGTGGAGGAGGAGTAGG 60.688 65.000 0.00 0.00 0.00 3.18
1147 1149 0.041238 TGGTGGTGGAGGAGGAGTAG 59.959 60.000 0.00 0.00 0.00 2.57
1148 1150 0.716591 ATGGTGGTGGAGGAGGAGTA 59.283 55.000 0.00 0.00 0.00 2.59
1149 1151 0.178861 AATGGTGGTGGAGGAGGAGT 60.179 55.000 0.00 0.00 0.00 3.85
1150 1152 0.254178 CAATGGTGGTGGAGGAGGAG 59.746 60.000 0.00 0.00 0.00 3.69
1151 1153 1.852157 GCAATGGTGGTGGAGGAGGA 61.852 60.000 0.00 0.00 0.00 3.71
1152 1154 1.379044 GCAATGGTGGTGGAGGAGG 60.379 63.158 0.00 0.00 0.00 4.30
1153 1155 1.687612 AGCAATGGTGGTGGAGGAG 59.312 57.895 0.00 0.00 33.11 3.69
1154 1156 3.920817 AGCAATGGTGGTGGAGGA 58.079 55.556 0.00 0.00 33.11 3.71
1160 1162 1.607467 GGGAAGCAGCAATGGTGGT 60.607 57.895 11.60 11.60 43.62 4.16
1161 1163 2.353610 GGGGAAGCAGCAATGGTGG 61.354 63.158 14.61 0.00 0.00 4.61
1162 1164 1.607178 TGGGGAAGCAGCAATGGTG 60.607 57.895 8.23 8.23 0.00 4.17
1163 1165 1.607467 GTGGGGAAGCAGCAATGGT 60.607 57.895 0.00 0.00 0.00 3.55
1164 1166 2.353610 GGTGGGGAAGCAGCAATGG 61.354 63.158 0.00 0.00 0.00 3.16
1165 1167 1.304713 AGGTGGGGAAGCAGCAATG 60.305 57.895 0.00 0.00 0.00 2.82
1166 1168 1.000396 GAGGTGGGGAAGCAGCAAT 60.000 57.895 0.00 0.00 0.00 3.56
1167 1169 2.436109 GAGGTGGGGAAGCAGCAA 59.564 61.111 0.00 0.00 0.00 3.91
1168 1170 4.020617 CGAGGTGGGGAAGCAGCA 62.021 66.667 0.00 0.00 0.00 4.41
1169 1171 3.706373 TCGAGGTGGGGAAGCAGC 61.706 66.667 0.00 0.00 0.00 5.25
1170 1172 1.831652 AAGTCGAGGTGGGGAAGCAG 61.832 60.000 0.00 0.00 0.00 4.24
1171 1173 1.827399 GAAGTCGAGGTGGGGAAGCA 61.827 60.000 0.00 0.00 0.00 3.91
1172 1174 1.079057 GAAGTCGAGGTGGGGAAGC 60.079 63.158 0.00 0.00 0.00 3.86
1173 1175 1.597461 GGAAGTCGAGGTGGGGAAG 59.403 63.158 0.00 0.00 0.00 3.46
1174 1176 1.916777 GGGAAGTCGAGGTGGGGAA 60.917 63.158 0.00 0.00 0.00 3.97
1175 1177 2.284405 GGGAAGTCGAGGTGGGGA 60.284 66.667 0.00 0.00 0.00 4.81
1176 1178 2.284699 AGGGAAGTCGAGGTGGGG 60.285 66.667 0.00 0.00 0.00 4.96
1177 1179 1.305381 AGAGGGAAGTCGAGGTGGG 60.305 63.158 0.00 0.00 0.00 4.61
1178 1180 0.323908 AGAGAGGGAAGTCGAGGTGG 60.324 60.000 0.00 0.00 0.00 4.61
1179 1181 1.099689 GAGAGAGGGAAGTCGAGGTG 58.900 60.000 0.00 0.00 0.00 4.00
1180 1182 0.033894 GGAGAGAGGGAAGTCGAGGT 60.034 60.000 0.00 0.00 0.00 3.85
1181 1183 1.098712 CGGAGAGAGGGAAGTCGAGG 61.099 65.000 0.00 0.00 0.00 4.63
1182 1184 0.393267 ACGGAGAGAGGGAAGTCGAG 60.393 60.000 0.00 0.00 0.00 4.04
1183 1185 0.037877 AACGGAGAGAGGGAAGTCGA 59.962 55.000 0.00 0.00 0.00 4.20
1184 1186 0.171455 CAACGGAGAGAGGGAAGTCG 59.829 60.000 0.00 0.00 0.00 4.18
1185 1187 1.258676 ACAACGGAGAGAGGGAAGTC 58.741 55.000 0.00 0.00 0.00 3.01
1186 1188 1.718280 AACAACGGAGAGAGGGAAGT 58.282 50.000 0.00 0.00 0.00 3.01
1187 1189 2.841442 AAACAACGGAGAGAGGGAAG 57.159 50.000 0.00 0.00 0.00 3.46
1188 1190 3.197116 GGATAAACAACGGAGAGAGGGAA 59.803 47.826 0.00 0.00 0.00 3.97
1189 1191 2.764572 GGATAAACAACGGAGAGAGGGA 59.235 50.000 0.00 0.00 0.00 4.20
1190 1192 2.481449 CGGATAAACAACGGAGAGAGGG 60.481 54.545 0.00 0.00 0.00 4.30
1191 1193 2.810650 CGGATAAACAACGGAGAGAGG 58.189 52.381 0.00 0.00 0.00 3.69
1199 1201 2.990774 CGATGACCGGATAAACAACG 57.009 50.000 9.46 7.01 33.91 4.10
1222 1224 4.162690 AGATCCGGAACCAGGCGC 62.163 66.667 9.01 0.00 0.00 6.53
1223 1225 2.202932 CAGATCCGGAACCAGGCG 60.203 66.667 9.01 0.00 0.00 5.52
1224 1226 2.190578 CCAGATCCGGAACCAGGC 59.809 66.667 9.01 0.00 0.00 4.85
1225 1227 2.190578 GCCAGATCCGGAACCAGG 59.809 66.667 9.01 12.48 0.00 4.45
1226 1228 2.202932 CGCCAGATCCGGAACCAG 60.203 66.667 9.01 0.43 0.00 4.00
1227 1229 4.467084 GCGCCAGATCCGGAACCA 62.467 66.667 9.01 0.00 0.00 3.67
1228 1230 3.969250 TTGCGCCAGATCCGGAACC 62.969 63.158 9.01 3.18 31.17 3.62
1229 1231 2.435938 TTGCGCCAGATCCGGAAC 60.436 61.111 9.01 5.70 31.17 3.62
1230 1232 2.435938 GTTGCGCCAGATCCGGAA 60.436 61.111 9.01 0.00 33.69 4.30
1231 1233 4.467084 GGTTGCGCCAGATCCGGA 62.467 66.667 6.61 6.61 37.17 5.14
1232 1234 4.776322 TGGTTGCGCCAGATCCGG 62.776 66.667 4.18 0.00 43.61 5.14
1240 1242 2.409870 CCTTCCTGATGGTTGCGCC 61.410 63.158 4.18 0.00 37.90 6.53
1241 1243 1.675641 ACCTTCCTGATGGTTGCGC 60.676 57.895 0.00 0.00 35.58 6.09
1242 1244 1.926511 GCACCTTCCTGATGGTTGCG 61.927 60.000 2.18 0.00 36.81 4.85
1243 1245 0.895100 TGCACCTTCCTGATGGTTGC 60.895 55.000 14.18 14.18 36.81 4.17
1244 1246 1.542915 CTTGCACCTTCCTGATGGTTG 59.457 52.381 2.18 1.16 36.81 3.77
1245 1247 1.425066 TCTTGCACCTTCCTGATGGTT 59.575 47.619 2.18 0.00 36.81 3.67
1246 1248 1.067295 TCTTGCACCTTCCTGATGGT 58.933 50.000 0.00 0.00 39.17 3.55
1252 1254 1.272147 GGAACCATCTTGCACCTTCCT 60.272 52.381 0.00 0.00 0.00 3.36
1255 1257 1.620822 GTGGAACCATCTTGCACCTT 58.379 50.000 0.00 0.00 35.16 3.50
1328 1330 0.179067 GGGAATGGTATTCGTGCGGA 60.179 55.000 0.00 0.00 0.00 5.54
1338 1340 1.064017 GCTGTGGATTGGGGAATGGTA 60.064 52.381 0.00 0.00 0.00 3.25
1339 1341 0.324645 GCTGTGGATTGGGGAATGGT 60.325 55.000 0.00 0.00 0.00 3.55
1359 1361 4.664267 AGGAGGGAGGGTGCAGCA 62.664 66.667 19.06 0.00 0.00 4.41
1366 1368 2.040359 GGGGAAGAGGAGGGAGGG 60.040 72.222 0.00 0.00 0.00 4.30
1369 1371 0.327576 GATTGGGGGAAGAGGAGGGA 60.328 60.000 0.00 0.00 0.00 4.20
1382 1384 3.781307 TGTCGGCGAGGGATTGGG 61.781 66.667 11.20 0.00 0.00 4.12
1409 1411 3.742248 GAGGAGGAGGGGAGGGTCG 62.742 73.684 0.00 0.00 0.00 4.79
1417 1423 1.834822 GACGGATGGAGGAGGAGGG 60.835 68.421 0.00 0.00 0.00 4.30
1420 1426 1.230497 GAGGACGGATGGAGGAGGA 59.770 63.158 0.00 0.00 0.00 3.71
1423 1429 1.230497 GAGGAGGACGGATGGAGGA 59.770 63.158 0.00 0.00 0.00 3.71
1442 1449 3.499737 CAAGCACCGTCGATGGCC 61.500 66.667 23.85 14.57 0.00 5.36
1446 1453 1.736645 CGAACCAAGCACCGTCGAT 60.737 57.895 0.00 0.00 0.00 3.59
1450 1457 0.389948 GATCTCGAACCAAGCACCGT 60.390 55.000 0.00 0.00 0.00 4.83
1451 1458 0.108615 AGATCTCGAACCAAGCACCG 60.109 55.000 0.00 0.00 0.00 4.94
1470 1477 1.813753 GCTTGCCTAACCATCGCGA 60.814 57.895 13.09 13.09 0.00 5.87
1471 1478 2.709475 GCTTGCCTAACCATCGCG 59.291 61.111 0.00 0.00 0.00 5.87
1475 1482 2.275418 CCGGGCTTGCCTAACCAT 59.725 61.111 11.71 0.00 0.00 3.55
1495 1502 2.352805 CCTGCTCCTTCACCCCAC 59.647 66.667 0.00 0.00 0.00 4.61
1520 1527 2.031465 TTGTTTCCCCTCGTCGCC 59.969 61.111 0.00 0.00 0.00 5.54
1521 1528 2.033194 CCTTGTTTCCCCTCGTCGC 61.033 63.158 0.00 0.00 0.00 5.19
1531 1538 1.985895 TCCTCCCTCTTCCCTTGTTTC 59.014 52.381 0.00 0.00 0.00 2.78
1534 1541 0.252927 CCTCCTCCCTCTTCCCTTGT 60.253 60.000 0.00 0.00 0.00 3.16
1561 1568 1.995626 GGCCTGCTCCTTCACCCTA 60.996 63.158 0.00 0.00 0.00 3.53
1599 1606 2.710724 GAATGGTACCTAGCCGGCGG 62.711 65.000 24.35 24.35 35.61 6.13
1607 1614 1.488390 GGGACGGTGAATGGTACCTA 58.512 55.000 14.36 0.00 34.12 3.08
1609 1616 1.222661 GGGGACGGTGAATGGTACC 59.777 63.158 4.43 4.43 36.35 3.34
1626 1633 1.301479 GCGAATAGCCCCTAACCGG 60.301 63.158 0.00 0.00 40.81 5.28
1653 1660 1.244019 AAATTGGTGGCGAGTGAGGC 61.244 55.000 0.00 0.00 37.19 4.70
1658 1682 1.112315 TGGCAAAATTGGTGGCGAGT 61.112 50.000 10.27 0.00 44.15 4.18
1662 1686 0.324285 TCCATGGCAAAATTGGTGGC 59.676 50.000 6.96 8.54 41.71 5.01
1663 1687 1.901159 TCTCCATGGCAAAATTGGTGG 59.099 47.619 6.96 0.00 0.00 4.61
1722 1746 2.572095 CTTGGGTCGCGCACTGGATA 62.572 60.000 8.75 0.00 0.00 2.59
1723 1747 3.958147 CTTGGGTCGCGCACTGGAT 62.958 63.158 8.75 0.00 0.00 3.41
1727 1751 4.379243 CTCCTTGGGTCGCGCACT 62.379 66.667 8.75 0.00 0.00 4.40
1758 1782 1.004440 GAACCAGCGCAGGAAGACT 60.004 57.895 27.14 0.00 0.00 3.24
1764 1788 2.409870 GGGAATGAACCAGCGCAGG 61.410 63.158 18.43 18.43 0.00 4.85
1766 1790 1.675310 CAGGGAATGAACCAGCGCA 60.675 57.895 11.47 0.00 0.00 6.09
1767 1791 2.409870 CCAGGGAATGAACCAGCGC 61.410 63.158 0.00 0.00 0.00 5.92
1768 1792 1.026718 GTCCAGGGAATGAACCAGCG 61.027 60.000 0.00 0.00 0.00 5.18
1769 1793 1.026718 CGTCCAGGGAATGAACCAGC 61.027 60.000 0.00 0.00 0.00 4.85
1777 1801 0.037605 GTGTCGTTCGTCCAGGGAAT 60.038 55.000 0.00 0.00 0.00 3.01
1779 1803 2.567497 GGTGTCGTTCGTCCAGGGA 61.567 63.158 0.00 0.00 0.00 4.20
1784 1808 0.810823 TTGGTTGGTGTCGTTCGTCC 60.811 55.000 0.00 0.00 0.00 4.79
1785 1809 0.580104 CTTGGTTGGTGTCGTTCGTC 59.420 55.000 0.00 0.00 0.00 4.20
1787 1811 0.812412 ACCTTGGTTGGTGTCGTTCG 60.812 55.000 0.00 0.00 39.17 3.95
1799 1823 0.713579 AGAGAGAGCCCTACCTTGGT 59.286 55.000 0.00 0.00 0.00 3.67
1810 1834 1.589803 GTACGGAGAGGAGAGAGAGC 58.410 60.000 0.00 0.00 0.00 4.09
1813 1837 0.179012 GGGGTACGGAGAGGAGAGAG 60.179 65.000 0.00 0.00 0.00 3.20
1816 1840 1.305623 GTGGGGTACGGAGAGGAGA 59.694 63.158 0.00 0.00 0.00 3.71
1867 1891 2.274760 GCAAGCAGGGCAGGAGAT 59.725 61.111 0.00 0.00 0.00 2.75
1903 1950 0.382873 CAGAAGCAAGCAAGCACACA 59.617 50.000 3.19 0.00 36.85 3.72
1904 1951 0.383231 ACAGAAGCAAGCAAGCACAC 59.617 50.000 3.19 0.00 36.85 3.82
1905 1952 0.664761 GACAGAAGCAAGCAAGCACA 59.335 50.000 3.19 0.00 36.85 4.57
1906 1953 0.385223 CGACAGAAGCAAGCAAGCAC 60.385 55.000 3.19 0.00 36.85 4.40
1907 1954 0.815213 ACGACAGAAGCAAGCAAGCA 60.815 50.000 3.19 0.00 36.85 3.91
1908 1955 0.385223 CACGACAGAAGCAAGCAAGC 60.385 55.000 0.00 0.00 0.00 4.01
1909 1956 0.385223 GCACGACAGAAGCAAGCAAG 60.385 55.000 0.00 0.00 0.00 4.01
1910 1957 0.815213 AGCACGACAGAAGCAAGCAA 60.815 50.000 0.00 0.00 0.00 3.91
1928 1975 0.589729 GCAAGAACACACGCACACAG 60.590 55.000 0.00 0.00 0.00 3.66
1936 1983 2.916716 CACACAACAAGCAAGAACACAC 59.083 45.455 0.00 0.00 0.00 3.82
1953 2000 4.332637 CCCAGCAAGCACGCACAC 62.333 66.667 0.00 0.00 0.00 3.82
1966 2013 2.620112 CCAGCGACAAAGCACCCAG 61.620 63.158 0.00 0.00 40.15 4.45
1972 2019 1.008538 CAACACCCAGCGACAAAGC 60.009 57.895 0.00 0.00 37.41 3.51
1995 2044 1.035932 AACTGCATCAGGCCATCAGC 61.036 55.000 5.01 4.15 43.89 4.26
2052 2101 2.005451 GCAGCAACATCAGTAGGTCAG 58.995 52.381 0.00 0.00 0.00 3.51
2053 2102 1.625315 AGCAGCAACATCAGTAGGTCA 59.375 47.619 0.00 0.00 0.00 4.02
2054 2103 2.393271 AGCAGCAACATCAGTAGGTC 57.607 50.000 0.00 0.00 0.00 3.85
2055 2104 3.801698 CATAGCAGCAACATCAGTAGGT 58.198 45.455 0.00 0.00 0.00 3.08
2056 2105 2.547211 GCATAGCAGCAACATCAGTAGG 59.453 50.000 0.00 0.00 0.00 3.18
2057 2106 3.247886 CAGCATAGCAGCAACATCAGTAG 59.752 47.826 0.00 0.00 36.85 2.57
2058 2107 3.200483 CAGCATAGCAGCAACATCAGTA 58.800 45.455 0.00 0.00 36.85 2.74
2059 2108 2.014857 CAGCATAGCAGCAACATCAGT 58.985 47.619 0.00 0.00 36.85 3.41
2074 2123 2.611800 TCACTCCCTGGCCAGCAT 60.612 61.111 28.39 8.86 0.00 3.79
2085 2134 1.205893 GGATGTCACTGGACTCACTCC 59.794 57.143 0.00 0.00 44.61 3.85
2106 2155 7.114095 TCAAATCCTCAATGACTGAATGATCA 58.886 34.615 0.00 0.00 32.17 2.92
2139 2188 0.177141 CCCCATTTGCTGCCTTGATG 59.823 55.000 0.00 0.00 0.00 3.07
2178 2227 5.453057 GCCCCATTTATAAATGCATCACACA 60.453 40.000 26.29 0.00 43.38 3.72
2181 2230 5.212532 TGCCCCATTTATAAATGCATCAC 57.787 39.130 26.29 15.87 43.38 3.06
2182 2231 4.900652 ACTGCCCCATTTATAAATGCATCA 59.099 37.500 26.29 20.64 43.38 3.07
2183 2232 5.473066 ACTGCCCCATTTATAAATGCATC 57.527 39.130 26.29 18.09 43.38 3.91
2184 2233 7.557875 AATACTGCCCCATTTATAAATGCAT 57.442 32.000 26.29 15.60 43.38 3.96
2185 2234 6.992664 AATACTGCCCCATTTATAAATGCA 57.007 33.333 26.29 21.05 43.38 3.96
2186 2235 7.930865 TCAAAATACTGCCCCATTTATAAATGC 59.069 33.333 26.29 18.26 43.38 3.56
2189 2238 9.432982 AGATCAAAATACTGCCCCATTTATAAA 57.567 29.630 0.00 0.00 0.00 1.40
2190 2239 9.077885 GAGATCAAAATACTGCCCCATTTATAA 57.922 33.333 0.00 0.00 0.00 0.98
2191 2240 8.224025 TGAGATCAAAATACTGCCCCATTTATA 58.776 33.333 0.00 0.00 0.00 0.98
2192 2241 7.068702 TGAGATCAAAATACTGCCCCATTTAT 58.931 34.615 0.00 0.00 0.00 1.40
2193 2242 6.430864 TGAGATCAAAATACTGCCCCATTTA 58.569 36.000 0.00 0.00 0.00 1.40
2194 2243 5.271598 TGAGATCAAAATACTGCCCCATTT 58.728 37.500 0.00 0.00 0.00 2.32
2195 2244 4.870636 TGAGATCAAAATACTGCCCCATT 58.129 39.130 0.00 0.00 0.00 3.16
2196 2245 4.524802 TGAGATCAAAATACTGCCCCAT 57.475 40.909 0.00 0.00 0.00 4.00
2197 2246 4.524802 ATGAGATCAAAATACTGCCCCA 57.475 40.909 0.00 0.00 0.00 4.96
2198 2247 5.221322 GGAAATGAGATCAAAATACTGCCCC 60.221 44.000 0.00 0.00 0.00 5.80
2199 2248 5.360714 TGGAAATGAGATCAAAATACTGCCC 59.639 40.000 0.00 0.00 0.00 5.36
2200 2249 6.096001 AGTGGAAATGAGATCAAAATACTGCC 59.904 38.462 0.00 0.00 0.00 4.85
2201 2250 6.971184 CAGTGGAAATGAGATCAAAATACTGC 59.029 38.462 0.00 0.00 30.28 4.40
2202 2251 8.180267 GTCAGTGGAAATGAGATCAAAATACTG 58.820 37.037 0.00 0.00 44.02 2.74
2203 2252 7.065085 CGTCAGTGGAAATGAGATCAAAATACT 59.935 37.037 0.00 0.00 44.02 2.12
2204 2253 7.182761 CGTCAGTGGAAATGAGATCAAAATAC 58.817 38.462 0.00 0.00 44.02 1.89
2205 2254 6.183360 GCGTCAGTGGAAATGAGATCAAAATA 60.183 38.462 0.00 0.00 44.02 1.40
2206 2255 5.392380 GCGTCAGTGGAAATGAGATCAAAAT 60.392 40.000 0.00 0.00 44.02 1.82
2207 2256 4.083324 GCGTCAGTGGAAATGAGATCAAAA 60.083 41.667 0.00 0.00 44.02 2.44
2208 2257 3.436704 GCGTCAGTGGAAATGAGATCAAA 59.563 43.478 0.00 0.00 44.02 2.69
2209 2258 3.002791 GCGTCAGTGGAAATGAGATCAA 58.997 45.455 0.00 0.00 44.02 2.57
2210 2259 2.028203 TGCGTCAGTGGAAATGAGATCA 60.028 45.455 0.00 0.00 44.02 2.92
2211 2260 2.621338 TGCGTCAGTGGAAATGAGATC 58.379 47.619 0.00 0.00 44.02 2.75
2212 2261 2.768253 TGCGTCAGTGGAAATGAGAT 57.232 45.000 0.00 0.00 44.02 2.75
2213 2262 2.768253 ATGCGTCAGTGGAAATGAGA 57.232 45.000 0.00 0.00 44.02 3.27
2214 2263 3.837213 AAATGCGTCAGTGGAAATGAG 57.163 42.857 0.00 0.00 44.02 2.90
2215 2264 5.895636 AATAAATGCGTCAGTGGAAATGA 57.104 34.783 0.00 0.00 39.41 2.57
2216 2265 8.533965 CAAATAATAAATGCGTCAGTGGAAATG 58.466 33.333 0.00 0.00 0.00 2.32
2217 2266 8.250332 ACAAATAATAAATGCGTCAGTGGAAAT 58.750 29.630 0.00 0.00 0.00 2.17
2218 2267 7.598278 ACAAATAATAAATGCGTCAGTGGAAA 58.402 30.769 0.00 0.00 0.00 3.13
2219 2268 7.151999 ACAAATAATAAATGCGTCAGTGGAA 57.848 32.000 0.00 0.00 0.00 3.53
2220 2269 6.456315 CGACAAATAATAAATGCGTCAGTGGA 60.456 38.462 0.00 0.00 0.00 4.02
2221 2270 5.676744 CGACAAATAATAAATGCGTCAGTGG 59.323 40.000 0.00 0.00 0.00 4.00
2222 2271 6.247903 ACGACAAATAATAAATGCGTCAGTG 58.752 36.000 0.00 0.00 0.00 3.66
2223 2272 6.312918 AGACGACAAATAATAAATGCGTCAGT 59.687 34.615 0.50 0.00 41.51 3.41
2244 2293 5.175859 ACTTGGTGGTATGTAATGAAGACG 58.824 41.667 0.00 0.00 0.00 4.18
2251 2300 3.264964 ACCCGAACTTGGTGGTATGTAAT 59.735 43.478 0.00 0.00 33.94 1.89
2258 2307 1.826487 GCAACCCGAACTTGGTGGT 60.826 57.895 0.00 0.00 35.88 4.16
2290 2340 4.929808 ACGGTGAAGCAGACTACAAAATAG 59.070 41.667 0.00 0.00 0.00 1.73
2311 2361 3.138304 TGGGTCTTCATTCAAGTTCACG 58.862 45.455 0.00 0.00 33.27 4.35
2340 2390 8.242053 CAGCTCAATGACTTTCACAAATTAGAT 58.758 33.333 0.00 0.00 0.00 1.98
2375 2425 3.067106 ACCAACACAATCTTCTAGTGCG 58.933 45.455 0.00 0.00 36.76 5.34
2390 2440 8.927675 ACAAATAGTACAAAATCCTACCAACA 57.072 30.769 0.00 0.00 0.00 3.33
2463 2552 0.745486 TGGCTTCAGATGCATGACCG 60.745 55.000 2.46 0.00 0.00 4.79
2480 2569 6.946009 TCCTAAAAATCCTGGAAAGTAAGTGG 59.054 38.462 0.00 0.00 0.00 4.00
2492 2581 1.338020 GCCGCCATCCTAAAAATCCTG 59.662 52.381 0.00 0.00 0.00 3.86
2500 2589 0.837272 AAGCTTAGCCGCCATCCTAA 59.163 50.000 0.00 0.00 0.00 2.69
2510 2599 5.124617 AGCAACATTAAAGAGAAGCTTAGCC 59.875 40.000 0.00 0.00 35.24 3.93
2558 2647 2.887152 GGCAGAAACAGAATCACCAACT 59.113 45.455 0.00 0.00 0.00 3.16
2594 2683 8.470002 GCTTATTCTGGAAACTGGAACAATAAT 58.530 33.333 0.00 0.00 38.70 1.28
2595 2684 7.669722 AGCTTATTCTGGAAACTGGAACAATAA 59.330 33.333 0.00 0.00 38.70 1.40
2600 2689 7.415653 CCATTAGCTTATTCTGGAAACTGGAAC 60.416 40.741 0.00 0.00 0.00 3.62
2601 2690 6.603201 CCATTAGCTTATTCTGGAAACTGGAA 59.397 38.462 0.00 0.00 0.00 3.53
2613 2702 9.736023 CCAAATACAGTTTCCATTAGCTTATTC 57.264 33.333 0.00 0.00 0.00 1.75
2659 2748 6.183360 ACAGAAGAAGAAAATGGTTGCAATCA 60.183 34.615 16.12 16.12 0.00 2.57
2663 2752 5.596836 AACAGAAGAAGAAAATGGTTGCA 57.403 34.783 0.00 0.00 0.00 4.08
2734 2824 9.273016 CCTGTAGAAGAAATACACTTCAAAAGA 57.727 33.333 0.00 0.00 44.01 2.52
2735 2825 9.273016 TCCTGTAGAAGAAATACACTTCAAAAG 57.727 33.333 0.00 0.00 44.01 2.27
2756 2846 9.892130 CTTAAGGTATAGATGAAACTTTCCTGT 57.108 33.333 0.00 0.00 0.00 4.00
2791 2882 6.295859 GCTATGGTATGGTTCATCATCAGGTA 60.296 42.308 0.00 0.00 0.00 3.08
2793 2884 4.940046 GCTATGGTATGGTTCATCATCAGG 59.060 45.833 0.00 0.00 0.00 3.86
2863 2954 9.134734 GTTCACAAATGTTCACAGTAAAGAAAA 57.865 29.630 0.00 0.00 0.00 2.29
2865 2956 7.122055 AGGTTCACAAATGTTCACAGTAAAGAA 59.878 33.333 0.00 0.00 0.00 2.52
2867 2958 6.795399 AGGTTCACAAATGTTCACAGTAAAG 58.205 36.000 0.00 0.00 0.00 1.85
2872 2963 4.268405 GCAAAGGTTCACAAATGTTCACAG 59.732 41.667 0.00 0.00 0.00 3.66
2884 2976 3.127425 AGTAGTCCAGCAAAGGTTCAC 57.873 47.619 0.00 0.00 0.00 3.18
2889 2981 1.168714 GGCAAGTAGTCCAGCAAAGG 58.831 55.000 0.00 0.00 0.00 3.11
2900 2992 6.295916 CCCTACTATTTATCCAGGGCAAGTAG 60.296 46.154 0.00 0.00 39.62 2.57
2902 2994 4.351111 CCCTACTATTTATCCAGGGCAAGT 59.649 45.833 0.00 0.00 39.62 3.16
2932 3024 7.831193 CCTATGCAGCTCCTATATTTACCAATT 59.169 37.037 0.00 0.00 0.00 2.32
2949 3041 3.442100 GCAGTCAATTTTCCTATGCAGC 58.558 45.455 0.00 0.00 32.58 5.25
3042 3134 5.234466 ACTTGCCACTTCTGACTTTAGAT 57.766 39.130 0.00 0.00 0.00 1.98
3063 3170 1.396996 GGTGCCGTGATGACAACATAC 59.603 52.381 0.00 0.00 36.82 2.39
3091 3198 5.939883 GCCTATGTTTGGCTGATCATATGTA 59.060 40.000 1.90 0.00 46.38 2.29
3104 3211 6.299141 AGTAATCCTATGTGCCTATGTTTGG 58.701 40.000 0.00 0.00 0.00 3.28
3155 3263 3.366719 GAGAACACAAAAGAGTTGCTGC 58.633 45.455 0.00 0.00 0.00 5.25
3156 3264 3.063997 ACGAGAACACAAAAGAGTTGCTG 59.936 43.478 0.00 0.00 0.00 4.41
3194 3302 7.038154 TGAAACCATTTCCTTGAACTACTTG 57.962 36.000 0.00 0.00 38.90 3.16
3196 3304 6.833933 ACTTGAAACCATTTCCTTGAACTACT 59.166 34.615 0.00 0.00 38.90 2.57
3207 3315 4.647424 TCACACCACTTGAAACCATTTC 57.353 40.909 0.00 0.00 40.08 2.17
3210 3318 2.958355 CCTTCACACCACTTGAAACCAT 59.042 45.455 0.00 0.00 32.61 3.55
3213 3321 2.024414 AGCCTTCACACCACTTGAAAC 58.976 47.619 0.00 0.00 32.61 2.78
3311 3421 9.173021 TGAAACAATGTAATATAGACAACAGGG 57.827 33.333 0.00 0.00 0.00 4.45
3356 3466 2.231235 CCACAAGGCACCCAAGAATTAC 59.769 50.000 0.00 0.00 0.00 1.89
3377 3487 4.545610 TGATGCCTGAAATTGAAACGTTC 58.454 39.130 0.00 0.00 0.00 3.95
3386 3496 7.854337 ACAATTTAGGAATGATGCCTGAAATT 58.146 30.769 0.98 7.78 35.08 1.82
3402 3512 3.192422 TCATGGACGCCAAACAATTTAGG 59.808 43.478 2.68 0.00 36.95 2.69
3458 3568 3.804325 CGAGCGACAAAATCCTACATGAT 59.196 43.478 0.00 0.00 0.00 2.45
3474 3584 1.067565 AGCAAGAAAGATCACGAGCGA 60.068 47.619 0.00 0.00 0.00 4.93
3488 3598 0.324943 GGCAGGTCACCTAAGCAAGA 59.675 55.000 8.38 0.00 29.64 3.02
3525 3635 1.142060 ACACGACAAACCTGATTGGGA 59.858 47.619 0.00 0.00 41.11 4.37
3581 3754 1.472082 TGCCACTCACACAAAACACAG 59.528 47.619 0.00 0.00 0.00 3.66
3602 3845 7.107542 CCATTTCTCCAAAAATCCAATCATGT 58.892 34.615 0.00 0.00 0.00 3.21
3629 3872 6.260714 CCACATATAGCAGTGAAGCAACAATA 59.739 38.462 0.00 0.00 37.97 1.90
3716 3959 8.496707 AAAATAAGATGGGCTAAAGCAATTTG 57.503 30.769 4.07 0.00 44.36 2.32
3771 4020 2.763215 CACTGGGGCTGCCCTTTA 59.237 61.111 34.99 20.90 44.66 1.85
3777 4026 2.045045 TACATGCACTGGGGCTGC 60.045 61.111 0.00 0.00 35.03 5.25
3778 4027 2.117156 GCTACATGCACTGGGGCTG 61.117 63.158 0.00 0.00 42.31 4.85
3779 4028 2.262774 GAGCTACATGCACTGGGGCT 62.263 60.000 13.29 13.29 45.94 5.19
3780 4029 1.821332 GAGCTACATGCACTGGGGC 60.821 63.158 0.00 0.00 45.94 5.80
3781 4030 1.153086 GGAGCTACATGCACTGGGG 60.153 63.158 0.00 0.00 45.94 4.96
3782 4031 1.153086 GGGAGCTACATGCACTGGG 60.153 63.158 0.00 0.00 45.94 4.45
3783 4032 1.522355 CGGGAGCTACATGCACTGG 60.522 63.158 0.00 0.00 45.94 4.00
3784 4033 4.115279 CGGGAGCTACATGCACTG 57.885 61.111 0.00 0.00 45.94 3.66
3805 4054 4.785453 CTTCCCCAGACCCTGCGC 62.785 72.222 0.00 0.00 0.00 6.09
3806 4055 4.101448 CCTTCCCCAGACCCTGCG 62.101 72.222 0.00 0.00 0.00 5.18
3807 4056 3.732849 CCCTTCCCCAGACCCTGC 61.733 72.222 0.00 0.00 0.00 4.85
3808 4057 2.204151 ACCCTTCCCCAGACCCTG 60.204 66.667 0.00 0.00 0.00 4.45
3809 4058 2.125225 GACCCTTCCCCAGACCCT 59.875 66.667 0.00 0.00 0.00 4.34
3810 4059 3.015753 GGACCCTTCCCCAGACCC 61.016 72.222 0.00 0.00 35.57 4.46
3811 4060 3.400054 CGGACCCTTCCCCAGACC 61.400 72.222 0.00 0.00 38.99 3.85
3812 4061 2.284405 TCGGACCCTTCCCCAGAC 60.284 66.667 0.00 0.00 38.99 3.51
3813 4062 2.284405 GTCGGACCCTTCCCCAGA 60.284 66.667 0.00 0.00 38.99 3.86
3814 4063 3.400054 GGTCGGACCCTTCCCCAG 61.400 72.222 16.55 0.00 38.99 4.45
3815 4064 4.257810 TGGTCGGACCCTTCCCCA 62.258 66.667 23.81 0.69 38.99 4.96
3816 4065 3.714001 GTGGTCGGACCCTTCCCC 61.714 72.222 23.81 0.00 38.99 4.81
3817 4066 1.775934 AAAGTGGTCGGACCCTTCCC 61.776 60.000 23.81 7.17 38.99 3.97
3818 4067 0.605589 CAAAGTGGTCGGACCCTTCC 60.606 60.000 23.81 9.51 37.50 3.46
3819 4068 0.605589 CCAAAGTGGTCGGACCCTTC 60.606 60.000 23.81 13.97 37.50 3.46
3820 4069 1.454539 CCAAAGTGGTCGGACCCTT 59.545 57.895 23.81 21.08 37.50 3.95
3821 4070 2.526046 CCCAAAGTGGTCGGACCCT 61.526 63.158 23.81 16.82 37.50 4.34
3822 4071 2.033602 CCCAAAGTGGTCGGACCC 59.966 66.667 23.81 14.91 37.50 4.46
3823 4072 1.302271 GACCCAAAGTGGTCGGACC 60.302 63.158 20.36 20.36 44.98 4.46
3824 4073 4.373771 GACCCAAAGTGGTCGGAC 57.626 61.111 0.00 0.00 44.98 4.79
3829 4078 3.867216 GCGTACAATAGACCCAAAGTGGT 60.867 47.826 0.00 0.00 42.79 4.16
3830 4079 2.676342 GCGTACAATAGACCCAAAGTGG 59.324 50.000 0.00 0.00 37.25 4.00
3831 4080 3.331150 TGCGTACAATAGACCCAAAGTG 58.669 45.455 0.00 0.00 0.00 3.16
3832 4081 3.596214 CTGCGTACAATAGACCCAAAGT 58.404 45.455 0.00 0.00 0.00 2.66
3833 4082 2.351726 GCTGCGTACAATAGACCCAAAG 59.648 50.000 0.00 0.00 0.00 2.77
3834 4083 2.352388 GCTGCGTACAATAGACCCAAA 58.648 47.619 0.00 0.00 0.00 3.28
3835 4084 1.406341 GGCTGCGTACAATAGACCCAA 60.406 52.381 0.00 0.00 0.00 4.12
3836 4085 0.177141 GGCTGCGTACAATAGACCCA 59.823 55.000 0.00 0.00 0.00 4.51
3837 4086 0.464452 AGGCTGCGTACAATAGACCC 59.536 55.000 0.00 0.00 0.00 4.46
3838 4087 2.311124 AAGGCTGCGTACAATAGACC 57.689 50.000 0.00 0.00 0.00 3.85
3839 4088 2.608090 GGAAAGGCTGCGTACAATAGAC 59.392 50.000 0.00 0.00 0.00 2.59
3840 4089 2.419574 GGGAAAGGCTGCGTACAATAGA 60.420 50.000 0.00 0.00 0.00 1.98
3841 4090 1.940613 GGGAAAGGCTGCGTACAATAG 59.059 52.381 0.00 0.00 0.00 1.73
3842 4091 1.557832 AGGGAAAGGCTGCGTACAATA 59.442 47.619 0.00 0.00 0.00 1.90
3843 4092 0.328258 AGGGAAAGGCTGCGTACAAT 59.672 50.000 0.00 0.00 0.00 2.71
3844 4093 0.978151 TAGGGAAAGGCTGCGTACAA 59.022 50.000 0.00 0.00 0.00 2.41
3845 4094 0.248289 GTAGGGAAAGGCTGCGTACA 59.752 55.000 0.00 0.00 36.89 2.90
3846 4095 0.248289 TGTAGGGAAAGGCTGCGTAC 59.752 55.000 0.00 0.00 37.28 3.67
3847 4096 1.138266 GATGTAGGGAAAGGCTGCGTA 59.862 52.381 0.00 0.00 0.00 4.42
3848 4097 0.107654 GATGTAGGGAAAGGCTGCGT 60.108 55.000 0.00 0.00 0.00 5.24
3849 4098 1.154205 CGATGTAGGGAAAGGCTGCG 61.154 60.000 0.00 0.00 0.00 5.18
3850 4099 0.107654 ACGATGTAGGGAAAGGCTGC 60.108 55.000 0.00 0.00 0.00 5.25
3851 4100 2.403252 AACGATGTAGGGAAAGGCTG 57.597 50.000 0.00 0.00 0.00 4.85
3852 4101 2.572104 AGAAACGATGTAGGGAAAGGCT 59.428 45.455 0.00 0.00 0.00 4.58
3853 4102 2.987232 AGAAACGATGTAGGGAAAGGC 58.013 47.619 0.00 0.00 0.00 4.35
3854 4103 4.575885 TGAAGAAACGATGTAGGGAAAGG 58.424 43.478 0.00 0.00 0.00 3.11
3855 4104 6.480320 CCTATGAAGAAACGATGTAGGGAAAG 59.520 42.308 0.00 0.00 0.00 2.62
3856 4105 6.155565 TCCTATGAAGAAACGATGTAGGGAAA 59.844 38.462 0.00 0.00 0.00 3.13
3857 4106 5.659525 TCCTATGAAGAAACGATGTAGGGAA 59.340 40.000 0.00 0.00 0.00 3.97
3858 4107 5.205821 TCCTATGAAGAAACGATGTAGGGA 58.794 41.667 0.00 0.00 0.00 4.20
3859 4108 5.531122 TCCTATGAAGAAACGATGTAGGG 57.469 43.478 0.00 0.00 0.00 3.53
3860 4109 6.422100 CACATCCTATGAAGAAACGATGTAGG 59.578 42.308 0.00 0.00 38.54 3.18
3861 4110 6.980978 ACACATCCTATGAAGAAACGATGTAG 59.019 38.462 0.00 0.00 38.54 2.74
3862 4111 6.873997 ACACATCCTATGAAGAAACGATGTA 58.126 36.000 0.00 0.00 38.54 2.29
3863 4112 5.734720 ACACATCCTATGAAGAAACGATGT 58.265 37.500 0.00 0.00 40.60 3.06
3864 4113 7.095481 CCATACACATCCTATGAAGAAACGATG 60.095 40.741 0.00 0.00 34.61 3.84
3865 4114 6.931281 CCATACACATCCTATGAAGAAACGAT 59.069 38.462 0.00 0.00 0.00 3.73
3866 4115 6.097696 TCCATACACATCCTATGAAGAAACGA 59.902 38.462 0.00 0.00 0.00 3.85
3867 4116 6.280643 TCCATACACATCCTATGAAGAAACG 58.719 40.000 0.00 0.00 0.00 3.60
3868 4117 7.254932 GCTTCCATACACATCCTATGAAGAAAC 60.255 40.741 0.00 0.00 0.00 2.78
3869 4118 6.767902 GCTTCCATACACATCCTATGAAGAAA 59.232 38.462 0.00 0.00 0.00 2.52
3870 4119 6.126796 TGCTTCCATACACATCCTATGAAGAA 60.127 38.462 0.00 0.00 0.00 2.52
3871 4120 5.366477 TGCTTCCATACACATCCTATGAAGA 59.634 40.000 0.00 0.00 0.00 2.87
3872 4121 5.468072 GTGCTTCCATACACATCCTATGAAG 59.532 44.000 0.00 0.00 36.77 3.02
3873 4122 5.104569 TGTGCTTCCATACACATCCTATGAA 60.105 40.000 0.00 0.00 41.67 2.57
3874 4123 4.408596 TGTGCTTCCATACACATCCTATGA 59.591 41.667 0.00 0.00 41.67 2.15
3875 4124 4.707105 TGTGCTTCCATACACATCCTATG 58.293 43.478 0.00 0.00 41.67 2.23
3876 4125 5.372343 TTGTGCTTCCATACACATCCTAT 57.628 39.130 0.00 0.00 45.59 2.57
3877 4126 4.835284 TTGTGCTTCCATACACATCCTA 57.165 40.909 0.00 0.00 45.59 2.94
3904 4153 8.293867 TGAAACGACCCTTTTTATTGTTGATAG 58.706 33.333 0.00 0.00 0.00 2.08
3959 4223 6.753744 CCTGGAACAATATTCTTTTGCTAAGC 59.246 38.462 0.00 0.00 38.70 3.09
3975 4239 6.248433 AGCATTAATTCTTCTCCTGGAACAA 58.752 36.000 0.00 0.00 38.70 2.83
3976 4240 5.819991 AGCATTAATTCTTCTCCTGGAACA 58.180 37.500 0.00 0.00 0.00 3.18
3977 4241 6.038050 CAGAGCATTAATTCTTCTCCTGGAAC 59.962 42.308 0.00 0.00 0.00 3.62
4056 4326 8.053026 TCTACTCCTCACTTGACATAGTAAAC 57.947 38.462 0.00 0.00 0.00 2.01
4067 4544 7.359598 CGTTTCTTCAATTCTACTCCTCACTTG 60.360 40.741 0.00 0.00 0.00 3.16
4136 4615 2.176889 TCTAGCAACACAGACTACCCC 58.823 52.381 0.00 0.00 0.00 4.95
4150 4629 7.631594 CTGTATCTAAACAGGAGCTTTCTAGCA 60.632 40.741 0.00 0.00 44.79 3.49
4208 4688 5.380043 TGAAGCTTCATGGAGTTCTTTTCT 58.620 37.500 25.16 0.00 31.01 2.52
4215 4695 5.176741 AGAATCTGAAGCTTCATGGAGTT 57.823 39.130 28.57 17.65 36.46 3.01
4223 4703 7.536622 CACAACATAACAAGAATCTGAAGCTTC 59.463 37.037 19.89 19.89 0.00 3.86
4300 5085 5.879223 AGCATAGTTTTCAAGATGGTCTCAG 59.121 40.000 0.00 0.00 0.00 3.35
4303 5088 5.649831 GGAAGCATAGTTTTCAAGATGGTCT 59.350 40.000 0.00 0.00 0.00 3.85
4329 5114 2.284952 GGCAACACAAATCAACAACAGC 59.715 45.455 0.00 0.00 0.00 4.40
4331 5116 3.883830 AGGCAACACAAATCAACAACA 57.116 38.095 0.00 0.00 41.41 3.33
4332 5117 4.209080 GCTAAGGCAACACAAATCAACAAC 59.791 41.667 0.00 0.00 38.54 3.32
4333 5118 4.142071 TGCTAAGGCAACACAAATCAACAA 60.142 37.500 0.00 0.00 46.36 2.83
4357 5142 1.075601 TTGAGGGGAAACAGCAGGAT 58.924 50.000 0.00 0.00 0.00 3.24
4374 5159 4.050553 CCAGCCTGTGTACAACATTTTTG 58.949 43.478 0.00 0.00 38.39 2.44
4459 5244 5.856156 TGTTACCCGTTAGAATCACAAGAA 58.144 37.500 0.00 0.00 0.00 2.52
4493 5279 4.864806 CACCACTATCATATCGCGCTAAAT 59.135 41.667 5.56 0.00 0.00 1.40
4498 5284 1.336887 ACCACCACTATCATATCGCGC 60.337 52.381 0.00 0.00 0.00 6.86
4626 5412 3.398954 ACTGCAACAAACTGTAACACG 57.601 42.857 0.00 0.00 0.00 4.49
4788 5583 9.990868 AATATTAGTTTGGAAGGTACCTCAAAT 57.009 29.630 24.08 17.27 32.73 2.32
4838 5633 9.434420 CATATTCAGTAGAGAAATCTCATTCCC 57.566 37.037 12.65 0.00 45.21 3.97
4932 5832 7.472100 GCTTTCACCTTCTGCTCCTTAGATATA 60.472 40.741 0.00 0.00 0.00 0.86
4946 5846 2.229792 TGATTTGCGCTTTCACCTTCT 58.770 42.857 9.73 0.00 0.00 2.85
4948 5848 3.451141 TTTGATTTGCGCTTTCACCTT 57.549 38.095 9.73 0.00 0.00 3.50
4971 5871 8.023050 AGAGAACGTCACATTTCAAAATAGAG 57.977 34.615 0.00 0.00 0.00 2.43
4981 5881 7.870954 TCACATTTAGTAGAGAACGTCACATTT 59.129 33.333 0.00 0.00 0.00 2.32
5042 5948 6.941218 GAGTTTGCTCCATCAAAGAAATTC 57.059 37.500 0.00 0.00 36.71 2.17
5106 6012 0.251916 CTAACCACGGAGATGGGCAA 59.748 55.000 0.00 0.00 44.81 4.52
5119 6026 5.479375 ACTCGAATTCTGGAAGTACTAACCA 59.521 40.000 17.14 17.14 33.76 3.67
5128 6035 1.734465 GTGCCACTCGAATTCTGGAAG 59.266 52.381 14.70 4.85 0.00 3.46
5165 6072 2.415857 GAGAGCATCAGCAAGACACTTG 59.584 50.000 7.07 7.07 45.49 3.16
5196 6106 9.480053 AAAAACAGAGACAAACATTAATCCATG 57.520 29.630 0.00 0.00 0.00 3.66
5222 6148 5.048852 GGGTATACGCAAAACAACCTAACAA 60.049 40.000 14.60 0.00 0.00 2.83
5232 6159 2.490509 AGCAAAGGGGTATACGCAAAAC 59.509 45.455 20.23 4.32 33.80 2.43
5263 6327 3.062099 GCGACGTCAGCTTCAATGAAATA 59.938 43.478 17.16 0.00 0.00 1.40
5279 6343 1.663702 CCGTTTCCTCTTGCGACGT 60.664 57.895 0.00 0.00 32.26 4.34
5281 6345 1.014564 CCTCCGTTTCCTCTTGCGAC 61.015 60.000 0.00 0.00 0.00 5.19
5349 6415 1.815840 TTGTCGGCGCAGTGACAAA 60.816 52.632 28.37 17.41 46.11 2.83
5450 6523 8.029782 TGTGGGTATTATAGAGCATTGTAACT 57.970 34.615 0.00 0.00 0.00 2.24
5484 6558 5.988561 GTGGTGCAAAAATCCAATTAGAACA 59.011 36.000 0.00 0.00 32.82 3.18
5496 6570 4.199432 TGTCAAGTTGTGGTGCAAAAAT 57.801 36.364 2.11 0.00 39.03 1.82
5499 6573 2.560542 ACTTGTCAAGTTGTGGTGCAAA 59.439 40.909 12.62 0.00 39.04 3.68
5504 6578 4.755266 AGTAGACTTGTCAAGTTGTGGT 57.245 40.909 19.09 5.45 43.03 4.16
5543 6630 6.769822 AGCTTTCCGAACATCATTCTTGATAT 59.230 34.615 0.00 0.00 40.70 1.63
5546 6633 4.326826 AGCTTTCCGAACATCATTCTTGA 58.673 39.130 0.00 0.00 36.00 3.02
5583 6670 3.030291 CCAAGTCTCATGAGCTAGTCCT 58.970 50.000 18.36 3.82 0.00 3.85
5594 6681 6.360618 GGGTATCTTTCATTCCAAGTCTCAT 58.639 40.000 0.00 0.00 0.00 2.90
5618 6705 2.367202 ACATACACCAGGAGCCCCG 61.367 63.158 0.00 0.00 37.58 5.73
5627 6714 3.329225 TCTTGATTGTCCCACATACACCA 59.671 43.478 0.00 0.00 0.00 4.17
5698 7032 2.978156 AGCATCTTTTCCTTCCACCA 57.022 45.000 0.00 0.00 0.00 4.17
5700 7034 3.758554 TGCTTAGCATCTTTTCCTTCCAC 59.241 43.478 1.39 0.00 31.71 4.02
5720 9311 1.747924 GAATCTCCTTCCTTGCCTTGC 59.252 52.381 0.00 0.00 0.00 4.01
5728 9319 4.912744 AGCCATTATCAGAATCTCCTTCCT 59.087 41.667 0.00 0.00 34.11 3.36
5751 9342 4.813235 GGTATGGCCTGGGCGCAA 62.813 66.667 16.08 0.00 43.06 4.85
5843 9526 1.135517 ACAAACACACACGCCAAGAAC 60.136 47.619 0.00 0.00 0.00 3.01
5849 9532 1.525619 GTCTAGACAAACACACACGCC 59.474 52.381 18.20 0.00 0.00 5.68
5952 9825 9.508642 TGTACATACACATTTGAATTTGGTAGA 57.491 29.630 0.00 0.00 0.00 2.59
5982 9855 8.275758 TGGGGCTTATTGTCTTTGTATACAATA 58.724 33.333 18.69 7.95 42.87 1.90
5987 9860 6.068010 CCATGGGGCTTATTGTCTTTGTATA 58.932 40.000 2.85 0.00 0.00 1.47
5989 9862 4.264172 ACCATGGGGCTTATTGTCTTTGTA 60.264 41.667 18.09 0.00 37.90 2.41
6040 9914 2.991250 ACAGGGAAGCACATATGACAC 58.009 47.619 10.38 0.00 0.00 3.67
6055 9929 7.989416 TGGTTTAGTTGATTTAGTTACAGGG 57.011 36.000 0.00 0.00 0.00 4.45
6077 9951 7.351981 TGTTAGCGATGAAAATAAATCGATGG 58.648 34.615 0.00 0.00 46.70 3.51
6081 9955 7.351981 TCCATGTTAGCGATGAAAATAAATCG 58.648 34.615 0.88 0.88 46.53 3.34
6136 10010 0.179000 AAGATAAGACCAGCTGCCGG 59.821 55.000 8.66 0.00 0.00 6.13
6140 10014 4.092091 GTCGTCAAAAGATAAGACCAGCTG 59.908 45.833 6.78 6.78 0.00 4.24
6183 10057 7.339212 ACTTTGTTGATAACATAATGGCAGCTA 59.661 33.333 0.00 0.00 41.79 3.32
6225 10099 9.846248 GCATATACTCAAAACTGAAACTGATTT 57.154 29.630 0.00 0.00 0.00 2.17
6252 10128 4.923281 GGTTTGATTTGGTGAAAGATTCCG 59.077 41.667 0.00 0.00 0.00 4.30
6315 10191 7.604657 AAAGTAGGCAATAGCTACAGTCTAT 57.395 36.000 10.68 0.00 41.70 1.98
6316 10192 7.419711 AAAAGTAGGCAATAGCTACAGTCTA 57.580 36.000 0.00 0.00 41.70 2.59
6425 10301 7.140705 CCACTATATCCATTTACACGTTACGA 58.859 38.462 13.03 0.00 0.00 3.43
6427 10303 9.918630 ATACCACTATATCCATTTACACGTTAC 57.081 33.333 0.00 0.00 0.00 2.50
6457 10334 8.229811 GCAGTTCAAAGAAACAATTTGAGTTTT 58.770 29.630 2.79 0.00 44.86 2.43
6703 10580 3.305403 CCATCAAATCCTGATCATGCAGC 60.305 47.826 0.00 0.00 43.28 5.25
6734 10611 8.087750 CCAAATGCTTTATTTCACTCCAGTTTA 58.912 33.333 0.00 0.00 36.87 2.01
6860 10737 3.529533 CTCGCATCCTCTCAATTTCTGT 58.470 45.455 0.00 0.00 0.00 3.41
6915 10793 8.217111 TGAACAAATGGAGATTGCTATATGGTA 58.783 33.333 0.00 0.00 0.00 3.25
6946 10824 7.173390 GCTCTTTTCACTTTACAACCTACAGAT 59.827 37.037 0.00 0.00 0.00 2.90
6963 10841 5.392767 ACTCAATCTCGTAGCTCTTTTCA 57.607 39.130 0.00 0.00 0.00 2.69
6983 10861 7.616150 ACTCAGGTTGTACTCATATCTACAACT 59.384 37.037 18.43 8.88 46.41 3.16
7089 10968 7.597369 CACAATCATTCATGACACAAAGAACAT 59.403 33.333 0.00 0.00 40.03 2.71
7130 11129 9.846248 CAATACAAATCGAGAAAAGGAAAAGAT 57.154 29.630 0.00 0.00 0.00 2.40
7138 11138 8.562892 AGCATATCCAATACAAATCGAGAAAAG 58.437 33.333 0.00 0.00 0.00 2.27
7145 11146 6.982809 CGAGTAGCATATCCAATACAAATCG 58.017 40.000 0.00 0.00 0.00 3.34
7261 11262 2.444388 TCGATGGCTTAGACCTAGGGTA 59.556 50.000 14.81 0.92 35.25 3.69
7262 11263 1.217183 TCGATGGCTTAGACCTAGGGT 59.783 52.381 14.81 2.03 39.44 4.34
7263 11264 1.889829 CTCGATGGCTTAGACCTAGGG 59.110 57.143 14.81 0.00 0.00 3.53
7310 11312 1.889530 GCCTTGTCCGGCTGAGTAGT 61.890 60.000 0.00 0.00 46.63 2.73
7366 11373 5.807011 TCGTAGACATCACTGTGATCATTTG 59.193 40.000 19.89 12.77 34.28 2.32
7585 11592 6.894339 AACGGTGAAGGACAAAAATATTCT 57.106 33.333 0.00 0.00 0.00 2.40
7605 11612 5.901884 GGACTACGCAATGATCATTTAAACG 59.098 40.000 18.41 19.42 0.00 3.60
7607 11614 7.335673 TGAAGGACTACGCAATGATCATTTAAA 59.664 33.333 18.41 4.11 0.00 1.52
7616 11623 3.394674 TTGTGAAGGACTACGCAATGA 57.605 42.857 0.00 0.00 32.76 2.57
7636 11643 9.801873 ATACTTTTACGCAATGCTCATTTAATT 57.198 25.926 2.94 0.00 0.00 1.40
7637 11644 9.236691 CATACTTTTACGCAATGCTCATTTAAT 57.763 29.630 2.94 0.00 0.00 1.40
7761 11768 2.142356 TGCCCAGAGAGAGAGAGAAG 57.858 55.000 0.00 0.00 0.00 2.85
7762 11769 2.612285 TTGCCCAGAGAGAGAGAGAA 57.388 50.000 0.00 0.00 0.00 2.87
7763 11770 2.612285 TTTGCCCAGAGAGAGAGAGA 57.388 50.000 0.00 0.00 0.00 3.10
7764 11771 2.500910 ACATTTGCCCAGAGAGAGAGAG 59.499 50.000 0.00 0.00 0.00 3.20
7765 11772 2.544721 ACATTTGCCCAGAGAGAGAGA 58.455 47.619 0.00 0.00 0.00 3.10
7766 11773 3.347077 AACATTTGCCCAGAGAGAGAG 57.653 47.619 0.00 0.00 0.00 3.20
7812 11841 9.132521 CATTCAAACACATATCCAGAGTTTTTC 57.867 33.333 0.00 0.00 29.41 2.29
7825 11854 6.577103 TCTTTTTGTGCCATTCAAACACATA 58.423 32.000 0.00 0.00 43.34 2.29
7838 11867 6.319141 AGAACTATGAACTCTTTTTGTGCC 57.681 37.500 0.00 0.00 0.00 5.01
7937 11970 5.932883 TGTATATACAGTCGGTTTTGTTGCA 59.067 36.000 11.62 0.00 0.00 4.08
7938 11971 6.411630 TGTATATACAGTCGGTTTTGTTGC 57.588 37.500 11.62 0.00 0.00 4.17
7943 11976 5.061179 GGCCATGTATATACAGTCGGTTTT 58.939 41.667 19.80 0.00 39.92 2.43
8010 12043 1.032014 TGCTGCAAGAACCTTCAACC 58.968 50.000 0.00 0.00 34.07 3.77


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.