Multiple sequence alignment - TraesCS2B01G256400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G256400 chr2B 100.000 1931 0 0 934 2864 298180192 298182122 0.000000e+00 3567.0
1 TraesCS2B01G256400 chr2B 100.000 501 0 0 1 501 298179259 298179759 0.000000e+00 926.0
2 TraesCS2B01G256400 chr2B 87.648 761 87 6 2109 2864 745853035 745853793 0.000000e+00 878.0
3 TraesCS2B01G256400 chr2B 91.756 279 16 5 227 501 111999968 112000243 5.790000e-102 381.0
4 TraesCS2B01G256400 chr2B 92.857 238 17 0 1 238 373977333 373977096 2.110000e-91 346.0
5 TraesCS2B01G256400 chr2B 90.698 86 6 2 229 312 91550284 91550199 2.330000e-21 113.0
6 TraesCS2B01G256400 chr2B 94.872 39 2 0 934 972 627966213 627966251 8.570000e-06 62.1
7 TraesCS2B01G256400 chr2B 100.000 31 0 0 2047 2077 543945985 543945955 1.110000e-04 58.4
8 TraesCS2B01G256400 chr2B 100.000 31 0 0 2047 2077 544377494 544377464 1.110000e-04 58.4
9 TraesCS2B01G256400 chr7A 94.301 965 47 1 935 1891 686331635 686332599 0.000000e+00 1471.0
10 TraesCS2B01G256400 chr7A 87.579 636 74 4 2234 2864 104399454 104400089 0.000000e+00 732.0
11 TraesCS2B01G256400 chr7A 93.532 201 12 1 2109 2308 104399402 104399602 6.000000e-77 298.0
12 TraesCS2B01G256400 chr7A 97.248 109 3 0 1890 1998 686332562 686332670 4.870000e-43 185.0
13 TraesCS2B01G256400 chr4B 89.079 760 77 6 2109 2864 388613711 388614468 0.000000e+00 939.0
14 TraesCS2B01G256400 chr6B 88.228 756 83 6 2112 2864 200358176 200357424 0.000000e+00 898.0
15 TraesCS2B01G256400 chr6B 90.714 280 23 3 224 501 406660735 406661013 1.250000e-98 370.0
16 TraesCS2B01G256400 chr6B 91.286 241 18 2 1 238 577862460 577862700 2.750000e-85 326.0
17 TraesCS2B01G256400 chr6B 86.111 72 10 0 1111 1182 321156946 321157017 8.510000e-11 78.7
18 TraesCS2B01G256400 chr5B 87.815 755 84 7 2112 2860 140317078 140317830 0.000000e+00 878.0
19 TraesCS2B01G256400 chr5B 91.958 286 18 5 219 501 55805061 55804778 2.070000e-106 396.0
20 TraesCS2B01G256400 chr7B 86.675 758 94 5 2109 2864 347534342 347535094 0.000000e+00 833.0
21 TraesCS2B01G256400 chr7B 86.034 759 98 5 2109 2864 77200939 77201692 0.000000e+00 808.0
22 TraesCS2B01G256400 chr7B 86.726 339 24 3 1563 1891 365224804 365225131 9.760000e-95 357.0
23 TraesCS2B01G256400 chr7B 90.840 262 20 4 212 471 732619910 732619651 5.870000e-92 348.0
24 TraesCS2B01G256400 chr7B 91.892 185 13 2 1890 2073 365225094 365225277 1.020000e-64 257.0
25 TraesCS2B01G256400 chr7B 88.288 111 5 6 202 307 256174091 256174198 3.000000e-25 126.0
26 TraesCS2B01G256400 chr7B 95.556 45 2 0 1111 1155 481390840 481390884 3.960000e-09 73.1
27 TraesCS2B01G256400 chr5A 88.679 636 66 5 2234 2864 154721875 154721241 0.000000e+00 771.0
28 TraesCS2B01G256400 chr4A 88.050 636 71 5 2234 2864 126336774 126337409 0.000000e+00 749.0
29 TraesCS2B01G256400 chr4A 94.444 198 9 2 2112 2307 126336724 126336921 1.290000e-78 303.0
30 TraesCS2B01G256400 chr4A 100.000 31 0 0 2047 2077 721195097 721195067 1.110000e-04 58.4
31 TraesCS2B01G256400 chr1A 89.458 332 26 6 1563 1891 159557718 159558043 7.390000e-111 411.0
32 TraesCS2B01G256400 chr1A 93.122 189 11 2 1886 2073 159558002 159558189 2.810000e-70 276.0
33 TraesCS2B01G256400 chr2D 92.083 240 17 1 1 238 489416214 489415975 1.270000e-88 337.0
34 TraesCS2B01G256400 chr2D 91.250 240 19 1 1 238 308175385 308175146 2.750000e-85 326.0
35 TraesCS2B01G256400 chr3A 91.701 241 16 1 2 238 493157012 493156772 5.910000e-87 331.0
36 TraesCS2B01G256400 chr4D 91.632 239 18 1 1 237 373777275 373777513 2.130000e-86 329.0
37 TraesCS2B01G256400 chr1D 91.176 238 21 0 1 238 252932675 252932438 9.900000e-85 324.0
38 TraesCS2B01G256400 chr5D 91.176 238 20 1 1 238 476958704 476958940 3.560000e-84 322.0
39 TraesCS2B01G256400 chr5D 91.089 101 4 5 216 313 303305096 303304998 6.440000e-27 132.0
40 TraesCS2B01G256400 chr6A 89.328 253 24 2 1 250 406188267 406188519 5.960000e-82 315.0
41 TraesCS2B01G256400 chr1B 93.000 200 14 0 2109 2308 348564611 348564810 2.790000e-75 292.0
42 TraesCS2B01G256400 chr1B 87.209 86 8 2 224 307 661729064 661728980 8.450000e-16 95.3
43 TraesCS2B01G256400 chr6D 90.361 83 6 2 227 308 249285176 249285095 1.090000e-19 108.0
44 TraesCS2B01G256400 chr3B 88.235 68 4 3 2010 2075 385919576 385919511 8.510000e-11 78.7
45 TraesCS2B01G256400 chr3B 91.111 45 4 0 1111 1155 686577348 686577392 8.570000e-06 62.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G256400 chr2B 298179259 298182122 2863 False 2246.5 3567 100.0000 1 2864 2 chr2B.!!$F4 2863
1 TraesCS2B01G256400 chr2B 745853035 745853793 758 False 878.0 878 87.6480 2109 2864 1 chr2B.!!$F3 755
2 TraesCS2B01G256400 chr7A 686331635 686332670 1035 False 828.0 1471 95.7745 935 1998 2 chr7A.!!$F2 1063
3 TraesCS2B01G256400 chr7A 104399402 104400089 687 False 515.0 732 90.5555 2109 2864 2 chr7A.!!$F1 755
4 TraesCS2B01G256400 chr4B 388613711 388614468 757 False 939.0 939 89.0790 2109 2864 1 chr4B.!!$F1 755
5 TraesCS2B01G256400 chr6B 200357424 200358176 752 True 898.0 898 88.2280 2112 2864 1 chr6B.!!$R1 752
6 TraesCS2B01G256400 chr5B 140317078 140317830 752 False 878.0 878 87.8150 2112 2860 1 chr5B.!!$F1 748
7 TraesCS2B01G256400 chr7B 347534342 347535094 752 False 833.0 833 86.6750 2109 2864 1 chr7B.!!$F3 755
8 TraesCS2B01G256400 chr7B 77200939 77201692 753 False 808.0 808 86.0340 2109 2864 1 chr7B.!!$F1 755
9 TraesCS2B01G256400 chr5A 154721241 154721875 634 True 771.0 771 88.6790 2234 2864 1 chr5A.!!$R1 630
10 TraesCS2B01G256400 chr4A 126336724 126337409 685 False 526.0 749 91.2470 2112 2864 2 chr4A.!!$F1 752

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
75 76 0.030908 CTCGAACCTGTAGGATCCGC 59.969 60.0 5.98 4.17 38.94 5.54 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1915 1924 0.179468 TGCATGCTGCTAGCTCATGA 59.821 50.0 34.08 23.32 45.31 3.07 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 3.694734 CAGGTTGCGCTATTGGTTATTG 58.305 45.455 9.73 0.00 0.00 1.90
22 23 3.376859 CAGGTTGCGCTATTGGTTATTGA 59.623 43.478 9.73 0.00 0.00 2.57
23 24 3.377172 AGGTTGCGCTATTGGTTATTGAC 59.623 43.478 9.73 0.00 0.00 3.18
45 46 1.178276 GAGAGGTGTCTCGGTCATGT 58.822 55.000 0.00 0.00 44.47 3.21
46 47 1.133407 GAGAGGTGTCTCGGTCATGTC 59.867 57.143 0.00 0.00 44.47 3.06
47 48 1.178276 GAGGTGTCTCGGTCATGTCT 58.822 55.000 0.00 0.00 0.00 3.41
48 49 2.026169 AGAGGTGTCTCGGTCATGTCTA 60.026 50.000 0.00 0.00 44.47 2.59
49 50 2.093106 AGGTGTCTCGGTCATGTCTAC 58.907 52.381 0.00 0.00 0.00 2.59
50 51 1.816835 GGTGTCTCGGTCATGTCTACA 59.183 52.381 0.00 0.00 0.00 2.74
51 52 2.427453 GGTGTCTCGGTCATGTCTACAT 59.573 50.000 0.00 0.00 36.96 2.29
52 53 3.630769 GGTGTCTCGGTCATGTCTACATA 59.369 47.826 0.00 0.00 34.26 2.29
53 54 4.261238 GGTGTCTCGGTCATGTCTACATAG 60.261 50.000 0.00 0.00 34.26 2.23
54 55 4.575236 GTGTCTCGGTCATGTCTACATAGA 59.425 45.833 0.00 0.00 34.26 1.98
55 56 5.239744 GTGTCTCGGTCATGTCTACATAGAT 59.760 44.000 0.00 0.00 34.26 1.98
56 57 5.470437 TGTCTCGGTCATGTCTACATAGATC 59.530 44.000 0.00 0.00 34.26 2.75
57 58 5.703592 GTCTCGGTCATGTCTACATAGATCT 59.296 44.000 0.00 0.00 34.26 2.75
58 59 5.935206 TCTCGGTCATGTCTACATAGATCTC 59.065 44.000 0.00 0.00 34.26 2.75
59 60 4.691216 TCGGTCATGTCTACATAGATCTCG 59.309 45.833 0.00 0.00 34.26 4.04
60 61 4.691216 CGGTCATGTCTACATAGATCTCGA 59.309 45.833 0.00 0.00 34.26 4.04
61 62 5.179555 CGGTCATGTCTACATAGATCTCGAA 59.820 44.000 0.00 0.00 34.26 3.71
62 63 6.375377 GGTCATGTCTACATAGATCTCGAAC 58.625 44.000 0.00 0.00 34.26 3.95
63 64 6.375377 GTCATGTCTACATAGATCTCGAACC 58.625 44.000 0.00 0.00 34.26 3.62
64 65 6.205853 GTCATGTCTACATAGATCTCGAACCT 59.794 42.308 0.00 0.00 34.26 3.50
65 66 6.205658 TCATGTCTACATAGATCTCGAACCTG 59.794 42.308 0.00 0.00 34.26 4.00
66 67 5.437946 TGTCTACATAGATCTCGAACCTGT 58.562 41.667 0.00 0.00 34.39 4.00
67 68 6.589135 TGTCTACATAGATCTCGAACCTGTA 58.411 40.000 0.00 0.00 34.39 2.74
68 69 6.706716 TGTCTACATAGATCTCGAACCTGTAG 59.293 42.308 0.00 8.46 37.17 2.74
69 70 6.148150 GTCTACATAGATCTCGAACCTGTAGG 59.852 46.154 0.00 0.00 36.72 3.18
70 71 5.050126 ACATAGATCTCGAACCTGTAGGA 57.950 43.478 0.00 0.00 38.94 2.94
71 72 5.636123 ACATAGATCTCGAACCTGTAGGAT 58.364 41.667 0.00 0.00 38.94 3.24
72 73 5.708230 ACATAGATCTCGAACCTGTAGGATC 59.292 44.000 0.00 1.25 38.94 3.36
73 74 3.492337 AGATCTCGAACCTGTAGGATCC 58.508 50.000 2.48 2.48 38.94 3.36
74 75 1.676746 TCTCGAACCTGTAGGATCCG 58.323 55.000 5.98 5.18 38.94 4.18
75 76 0.030908 CTCGAACCTGTAGGATCCGC 59.969 60.000 5.98 4.17 38.94 5.54
76 77 0.681887 TCGAACCTGTAGGATCCGCA 60.682 55.000 5.98 8.92 38.94 5.69
77 78 0.527817 CGAACCTGTAGGATCCGCAC 60.528 60.000 5.98 9.30 38.94 5.34
78 79 0.527817 GAACCTGTAGGATCCGCACG 60.528 60.000 5.98 6.47 38.94 5.34
79 80 2.279517 CCTGTAGGATCCGCACGC 60.280 66.667 5.98 0.00 37.39 5.34
80 81 2.786495 CCTGTAGGATCCGCACGCT 61.786 63.158 5.98 0.00 37.39 5.07
81 82 1.141881 CTGTAGGATCCGCACGCTT 59.858 57.895 5.98 0.00 0.00 4.68
82 83 0.384309 CTGTAGGATCCGCACGCTTA 59.616 55.000 5.98 0.00 0.00 3.09
83 84 0.818938 TGTAGGATCCGCACGCTTAA 59.181 50.000 5.98 0.00 0.00 1.85
84 85 1.411246 TGTAGGATCCGCACGCTTAAT 59.589 47.619 5.98 0.00 0.00 1.40
85 86 1.792949 GTAGGATCCGCACGCTTAATG 59.207 52.381 5.98 0.00 0.00 1.90
86 87 0.178068 AGGATCCGCACGCTTAATGT 59.822 50.000 5.98 0.00 0.00 2.71
87 88 1.014352 GGATCCGCACGCTTAATGTT 58.986 50.000 0.00 0.00 0.00 2.71
88 89 1.400494 GGATCCGCACGCTTAATGTTT 59.600 47.619 0.00 0.00 0.00 2.83
89 90 2.440501 GATCCGCACGCTTAATGTTTG 58.559 47.619 0.00 0.00 0.00 2.93
90 91 1.514003 TCCGCACGCTTAATGTTTGA 58.486 45.000 0.00 0.00 0.00 2.69
91 92 2.080693 TCCGCACGCTTAATGTTTGAT 58.919 42.857 0.00 0.00 0.00 2.57
92 93 2.159585 TCCGCACGCTTAATGTTTGATG 60.160 45.455 0.00 0.00 0.00 3.07
93 94 2.159585 CCGCACGCTTAATGTTTGATGA 60.160 45.455 0.00 0.00 0.00 2.92
94 95 2.840176 CGCACGCTTAATGTTTGATGAC 59.160 45.455 0.00 0.00 0.00 3.06
95 96 2.840176 GCACGCTTAATGTTTGATGACG 59.160 45.455 0.00 0.00 0.00 4.35
96 97 3.424302 GCACGCTTAATGTTTGATGACGA 60.424 43.478 0.00 0.00 0.00 4.20
97 98 4.727734 GCACGCTTAATGTTTGATGACGAT 60.728 41.667 0.00 0.00 0.00 3.73
98 99 4.725280 CACGCTTAATGTTTGATGACGATG 59.275 41.667 0.00 0.00 0.00 3.84
99 100 4.391830 ACGCTTAATGTTTGATGACGATGT 59.608 37.500 0.00 0.00 0.00 3.06
100 101 5.579119 ACGCTTAATGTTTGATGACGATGTA 59.421 36.000 0.00 0.00 0.00 2.29
101 102 6.122782 CGCTTAATGTTTGATGACGATGTAG 58.877 40.000 0.00 0.00 0.00 2.74
102 103 6.237835 CGCTTAATGTTTGATGACGATGTAGT 60.238 38.462 0.00 0.00 0.00 2.73
103 104 6.901887 GCTTAATGTTTGATGACGATGTAGTG 59.098 38.462 0.00 0.00 0.00 2.74
104 105 7.413000 GCTTAATGTTTGATGACGATGTAGTGT 60.413 37.037 0.00 0.00 0.00 3.55
105 106 6.801539 AATGTTTGATGACGATGTAGTGTT 57.198 33.333 0.00 0.00 0.00 3.32
106 107 7.899178 AATGTTTGATGACGATGTAGTGTTA 57.101 32.000 0.00 0.00 0.00 2.41
107 108 8.492673 AATGTTTGATGACGATGTAGTGTTAT 57.507 30.769 0.00 0.00 0.00 1.89
108 109 9.594478 AATGTTTGATGACGATGTAGTGTTATA 57.406 29.630 0.00 0.00 0.00 0.98
109 110 9.764363 ATGTTTGATGACGATGTAGTGTTATAT 57.236 29.630 0.00 0.00 0.00 0.86
110 111 9.030301 TGTTTGATGACGATGTAGTGTTATATG 57.970 33.333 0.00 0.00 0.00 1.78
111 112 9.244799 GTTTGATGACGATGTAGTGTTATATGA 57.755 33.333 0.00 0.00 0.00 2.15
112 113 9.463443 TTTGATGACGATGTAGTGTTATATGAG 57.537 33.333 0.00 0.00 0.00 2.90
113 114 8.166422 TGATGACGATGTAGTGTTATATGAGT 57.834 34.615 0.00 0.00 0.00 3.41
114 115 8.630037 TGATGACGATGTAGTGTTATATGAGTT 58.370 33.333 0.00 0.00 0.00 3.01
117 118 9.893305 TGACGATGTAGTGTTATATGAGTTATG 57.107 33.333 0.00 0.00 0.00 1.90
118 119 9.894783 GACGATGTAGTGTTATATGAGTTATGT 57.105 33.333 0.00 0.00 0.00 2.29
119 120 9.678941 ACGATGTAGTGTTATATGAGTTATGTG 57.321 33.333 0.00 0.00 0.00 3.21
120 121 9.893305 CGATGTAGTGTTATATGAGTTATGTGA 57.107 33.333 0.00 0.00 0.00 3.58
126 127 9.905713 AGTGTTATATGAGTTATGTGATTTGGT 57.094 29.630 0.00 0.00 0.00 3.67
127 128 9.935682 GTGTTATATGAGTTATGTGATTTGGTG 57.064 33.333 0.00 0.00 0.00 4.17
128 129 9.898152 TGTTATATGAGTTATGTGATTTGGTGA 57.102 29.630 0.00 0.00 0.00 4.02
130 131 7.807977 ATATGAGTTATGTGATTTGGTGACC 57.192 36.000 0.00 0.00 0.00 4.02
131 132 4.000325 TGAGTTATGTGATTTGGTGACCG 59.000 43.478 0.00 0.00 0.00 4.79
132 133 4.250464 GAGTTATGTGATTTGGTGACCGA 58.750 43.478 0.00 0.00 0.00 4.69
133 134 4.647611 AGTTATGTGATTTGGTGACCGAA 58.352 39.130 6.78 6.78 0.00 4.30
134 135 5.253330 AGTTATGTGATTTGGTGACCGAAT 58.747 37.500 16.84 16.84 40.08 3.34
135 136 5.123820 AGTTATGTGATTTGGTGACCGAATG 59.876 40.000 21.42 0.00 37.71 2.67
136 137 2.857483 TGTGATTTGGTGACCGAATGT 58.143 42.857 21.42 0.00 37.71 2.71
137 138 3.218453 TGTGATTTGGTGACCGAATGTT 58.782 40.909 21.42 0.00 37.71 2.71
138 139 3.004210 TGTGATTTGGTGACCGAATGTTG 59.996 43.478 21.42 0.00 37.71 3.33
139 140 3.004315 GTGATTTGGTGACCGAATGTTGT 59.996 43.478 21.42 0.00 37.71 3.32
140 141 3.634448 TGATTTGGTGACCGAATGTTGTT 59.366 39.130 21.42 0.00 37.71 2.83
141 142 3.701532 TTTGGTGACCGAATGTTGTTC 57.298 42.857 0.00 0.00 0.00 3.18
142 143 1.222300 TGGTGACCGAATGTTGTTCG 58.778 50.000 0.00 3.39 41.21 3.95
150 151 1.649171 CGAATGTTGTTCGGAGTCTCG 59.351 52.381 2.48 0.00 38.19 4.04
151 152 1.993370 GAATGTTGTTCGGAGTCTCGG 59.007 52.381 1.00 1.00 0.00 4.63
152 153 1.254026 ATGTTGTTCGGAGTCTCGGA 58.746 50.000 6.03 6.03 0.00 4.55
153 154 1.254026 TGTTGTTCGGAGTCTCGGAT 58.746 50.000 10.61 0.00 0.00 4.18
154 155 1.067846 TGTTGTTCGGAGTCTCGGATG 60.068 52.381 10.61 0.00 0.00 3.51
155 156 1.201647 GTTGTTCGGAGTCTCGGATGA 59.798 52.381 10.61 0.00 0.00 2.92
156 157 1.095600 TGTTCGGAGTCTCGGATGAG 58.904 55.000 10.61 0.00 43.99 2.90
164 165 3.259592 TCTCGGATGAGACAACGGA 57.740 52.632 0.00 0.00 46.25 4.69
165 166 0.809385 TCTCGGATGAGACAACGGAC 59.191 55.000 0.00 0.00 46.25 4.79
166 167 0.526211 CTCGGATGAGACAACGGACA 59.474 55.000 0.00 0.00 45.57 4.02
167 168 1.135139 CTCGGATGAGACAACGGACAT 59.865 52.381 0.00 0.00 45.57 3.06
168 169 1.135112 TCGGATGAGACAACGGACATG 60.135 52.381 0.00 0.00 0.00 3.21
169 170 1.135112 CGGATGAGACAACGGACATGA 60.135 52.381 0.00 0.00 0.00 3.07
170 171 2.271800 GGATGAGACAACGGACATGAC 58.728 52.381 0.00 0.00 0.00 3.06
171 172 1.920574 GATGAGACAACGGACATGACG 59.079 52.381 0.00 6.35 37.36 4.35
172 173 0.955905 TGAGACAACGGACATGACGA 59.044 50.000 18.41 0.00 34.93 4.20
173 174 1.068541 TGAGACAACGGACATGACGAG 60.069 52.381 18.41 13.05 34.93 4.18
174 175 0.959553 AGACAACGGACATGACGAGT 59.040 50.000 18.41 15.43 34.93 4.18
175 176 2.156917 AGACAACGGACATGACGAGTA 58.843 47.619 18.41 0.00 34.93 2.59
176 177 2.161808 AGACAACGGACATGACGAGTAG 59.838 50.000 18.41 9.04 34.93 2.57
177 178 1.884579 ACAACGGACATGACGAGTAGT 59.115 47.619 18.41 9.52 34.93 2.73
193 194 5.312120 GAGTAGTCTCGAAATGGTCAAGA 57.688 43.478 0.00 0.00 0.00 3.02
194 195 5.317733 AGTAGTCTCGAAATGGTCAAGAG 57.682 43.478 0.00 0.00 0.00 2.85
195 196 3.601443 AGTCTCGAAATGGTCAAGAGG 57.399 47.619 0.00 0.00 0.00 3.69
196 197 2.900546 AGTCTCGAAATGGTCAAGAGGT 59.099 45.455 0.00 0.00 0.00 3.85
197 198 4.087182 AGTCTCGAAATGGTCAAGAGGTA 58.913 43.478 0.00 0.00 0.00 3.08
198 199 4.527038 AGTCTCGAAATGGTCAAGAGGTAA 59.473 41.667 0.00 0.00 0.00 2.85
199 200 5.011738 AGTCTCGAAATGGTCAAGAGGTAAA 59.988 40.000 0.00 0.00 0.00 2.01
200 201 5.348997 GTCTCGAAATGGTCAAGAGGTAAAG 59.651 44.000 0.00 0.00 0.00 1.85
201 202 5.245301 TCTCGAAATGGTCAAGAGGTAAAGA 59.755 40.000 0.00 0.00 0.00 2.52
202 203 6.049955 TCGAAATGGTCAAGAGGTAAAGAT 57.950 37.500 0.00 0.00 0.00 2.40
203 204 7.123697 TCTCGAAATGGTCAAGAGGTAAAGATA 59.876 37.037 0.00 0.00 0.00 1.98
204 205 7.792032 TCGAAATGGTCAAGAGGTAAAGATAT 58.208 34.615 0.00 0.00 0.00 1.63
205 206 8.920174 TCGAAATGGTCAAGAGGTAAAGATATA 58.080 33.333 0.00 0.00 0.00 0.86
206 207 9.712305 CGAAATGGTCAAGAGGTAAAGATATAT 57.288 33.333 0.00 0.00 0.00 0.86
261 262 7.362802 AGGGTGAGTCTATTCTAATAACACC 57.637 40.000 0.00 0.00 42.73 4.16
263 264 6.522946 GGTGAGTCTATTCTAATAACACCCC 58.477 44.000 0.00 0.00 39.17 4.95
264 265 6.326843 GGTGAGTCTATTCTAATAACACCCCT 59.673 42.308 0.00 0.00 39.17 4.79
265 266 7.147532 GGTGAGTCTATTCTAATAACACCCCTT 60.148 40.741 0.00 0.00 39.17 3.95
266 267 8.921205 GTGAGTCTATTCTAATAACACCCCTTA 58.079 37.037 0.00 0.00 0.00 2.69
267 268 9.496710 TGAGTCTATTCTAATAACACCCCTTAA 57.503 33.333 0.00 0.00 0.00 1.85
268 269 9.761504 GAGTCTATTCTAATAACACCCCTTAAC 57.238 37.037 0.00 0.00 0.00 2.01
269 270 9.275572 AGTCTATTCTAATAACACCCCTTAACA 57.724 33.333 0.00 0.00 0.00 2.41
270 271 9.543783 GTCTATTCTAATAACACCCCTTAACAG 57.456 37.037 0.00 0.00 0.00 3.16
271 272 9.275572 TCTATTCTAATAACACCCCTTAACAGT 57.724 33.333 0.00 0.00 0.00 3.55
272 273 9.543783 CTATTCTAATAACACCCCTTAACAGTC 57.456 37.037 0.00 0.00 0.00 3.51
273 274 7.563724 TTCTAATAACACCCCTTAACAGTCT 57.436 36.000 0.00 0.00 0.00 3.24
274 275 7.563724 TCTAATAACACCCCTTAACAGTCTT 57.436 36.000 0.00 0.00 0.00 3.01
275 276 8.669055 TCTAATAACACCCCTTAACAGTCTTA 57.331 34.615 0.00 0.00 0.00 2.10
276 277 9.275572 TCTAATAACACCCCTTAACAGTCTTAT 57.724 33.333 0.00 0.00 0.00 1.73
277 278 9.901172 CTAATAACACCCCTTAACAGTCTTATT 57.099 33.333 0.00 0.00 0.00 1.40
278 279 8.803397 AATAACACCCCTTAACAGTCTTATTC 57.197 34.615 0.00 0.00 0.00 1.75
279 280 6.449830 AACACCCCTTAACAGTCTTATTCT 57.550 37.500 0.00 0.00 0.00 2.40
280 281 5.805728 ACACCCCTTAACAGTCTTATTCTG 58.194 41.667 0.00 0.00 38.68 3.02
281 282 4.636206 CACCCCTTAACAGTCTTATTCTGC 59.364 45.833 0.00 0.00 36.50 4.26
282 283 4.536489 ACCCCTTAACAGTCTTATTCTGCT 59.464 41.667 0.00 0.00 36.50 4.24
283 284 5.724854 ACCCCTTAACAGTCTTATTCTGCTA 59.275 40.000 0.00 0.00 36.50 3.49
284 285 6.214819 ACCCCTTAACAGTCTTATTCTGCTAA 59.785 38.462 0.00 0.00 36.50 3.09
285 286 6.539103 CCCCTTAACAGTCTTATTCTGCTAAC 59.461 42.308 0.00 0.00 36.50 2.34
286 287 7.103641 CCCTTAACAGTCTTATTCTGCTAACA 58.896 38.462 0.00 0.00 36.50 2.41
287 288 7.064728 CCCTTAACAGTCTTATTCTGCTAACAC 59.935 40.741 0.00 0.00 36.50 3.32
288 289 7.819900 CCTTAACAGTCTTATTCTGCTAACACT 59.180 37.037 0.00 0.00 36.50 3.55
289 290 9.856488 CTTAACAGTCTTATTCTGCTAACACTA 57.144 33.333 0.00 0.00 36.50 2.74
290 291 9.635520 TTAACAGTCTTATTCTGCTAACACTAC 57.364 33.333 0.00 0.00 36.50 2.73
291 292 6.631962 ACAGTCTTATTCTGCTAACACTACC 58.368 40.000 0.00 0.00 36.50 3.18
292 293 6.437793 ACAGTCTTATTCTGCTAACACTACCT 59.562 38.462 0.00 0.00 36.50 3.08
293 294 7.038941 ACAGTCTTATTCTGCTAACACTACCTT 60.039 37.037 0.00 0.00 36.50 3.50
294 295 8.467598 CAGTCTTATTCTGCTAACACTACCTTA 58.532 37.037 0.00 0.00 0.00 2.69
295 296 9.203163 AGTCTTATTCTGCTAACACTACCTTAT 57.797 33.333 0.00 0.00 0.00 1.73
296 297 9.819267 GTCTTATTCTGCTAACACTACCTTATT 57.181 33.333 0.00 0.00 0.00 1.40
299 300 9.817809 TTATTCTGCTAACACTACCTTATTCTG 57.182 33.333 0.00 0.00 0.00 3.02
300 301 5.661458 TCTGCTAACACTACCTTATTCTGC 58.339 41.667 0.00 0.00 0.00 4.26
301 302 5.422331 TCTGCTAACACTACCTTATTCTGCT 59.578 40.000 0.00 0.00 0.00 4.24
302 303 6.605995 TCTGCTAACACTACCTTATTCTGCTA 59.394 38.462 0.00 0.00 0.00 3.49
303 304 7.123697 TCTGCTAACACTACCTTATTCTGCTAA 59.876 37.037 0.00 0.00 0.00 3.09
304 305 7.039882 TGCTAACACTACCTTATTCTGCTAAC 58.960 38.462 0.00 0.00 0.00 2.34
305 306 7.039882 GCTAACACTACCTTATTCTGCTAACA 58.960 38.462 0.00 0.00 0.00 2.41
306 307 7.010275 GCTAACACTACCTTATTCTGCTAACAC 59.990 40.741 0.00 0.00 0.00 3.32
307 308 5.731591 ACACTACCTTATTCTGCTAACACC 58.268 41.667 0.00 0.00 0.00 4.16
308 309 5.116882 CACTACCTTATTCTGCTAACACCC 58.883 45.833 0.00 0.00 0.00 4.61
309 310 3.646736 ACCTTATTCTGCTAACACCCC 57.353 47.619 0.00 0.00 0.00 4.95
310 311 2.916934 ACCTTATTCTGCTAACACCCCA 59.083 45.455 0.00 0.00 0.00 4.96
311 312 3.279434 CCTTATTCTGCTAACACCCCAC 58.721 50.000 0.00 0.00 0.00 4.61
312 313 3.279434 CTTATTCTGCTAACACCCCACC 58.721 50.000 0.00 0.00 0.00 4.61
313 314 0.331616 ATTCTGCTAACACCCCACCC 59.668 55.000 0.00 0.00 0.00 4.61
314 315 1.063070 TTCTGCTAACACCCCACCCA 61.063 55.000 0.00 0.00 0.00 4.51
315 316 0.844661 TCTGCTAACACCCCACCCAT 60.845 55.000 0.00 0.00 0.00 4.00
316 317 0.394352 CTGCTAACACCCCACCCATC 60.394 60.000 0.00 0.00 0.00 3.51
317 318 1.451387 GCTAACACCCCACCCATCG 60.451 63.158 0.00 0.00 0.00 3.84
318 319 1.906105 GCTAACACCCCACCCATCGA 61.906 60.000 0.00 0.00 0.00 3.59
319 320 0.107848 CTAACACCCCACCCATCGAC 60.108 60.000 0.00 0.00 0.00 4.20
320 321 0.836830 TAACACCCCACCCATCGACA 60.837 55.000 0.00 0.00 0.00 4.35
321 322 2.046314 CACCCCACCCATCGACAC 60.046 66.667 0.00 0.00 0.00 3.67
322 323 2.528127 ACCCCACCCATCGACACA 60.528 61.111 0.00 0.00 0.00 3.72
323 324 2.150719 ACCCCACCCATCGACACAA 61.151 57.895 0.00 0.00 0.00 3.33
324 325 1.074072 CCCCACCCATCGACACAAA 59.926 57.895 0.00 0.00 0.00 2.83
325 326 1.241315 CCCCACCCATCGACACAAAC 61.241 60.000 0.00 0.00 0.00 2.93
326 327 0.250727 CCCACCCATCGACACAAACT 60.251 55.000 0.00 0.00 0.00 2.66
327 328 1.002659 CCCACCCATCGACACAAACTA 59.997 52.381 0.00 0.00 0.00 2.24
328 329 2.073816 CCACCCATCGACACAAACTAC 58.926 52.381 0.00 0.00 0.00 2.73
329 330 2.549134 CCACCCATCGACACAAACTACA 60.549 50.000 0.00 0.00 0.00 2.74
330 331 3.135225 CACCCATCGACACAAACTACAA 58.865 45.455 0.00 0.00 0.00 2.41
331 332 3.186409 CACCCATCGACACAAACTACAAG 59.814 47.826 0.00 0.00 0.00 3.16
332 333 3.070446 ACCCATCGACACAAACTACAAGA 59.930 43.478 0.00 0.00 0.00 3.02
333 334 4.062293 CCCATCGACACAAACTACAAGAA 58.938 43.478 0.00 0.00 0.00 2.52
334 335 4.695455 CCCATCGACACAAACTACAAGAAT 59.305 41.667 0.00 0.00 0.00 2.40
335 336 5.872617 CCCATCGACACAAACTACAAGAATA 59.127 40.000 0.00 0.00 0.00 1.75
336 337 6.370442 CCCATCGACACAAACTACAAGAATAA 59.630 38.462 0.00 0.00 0.00 1.40
337 338 7.094975 CCCATCGACACAAACTACAAGAATAAA 60.095 37.037 0.00 0.00 0.00 1.40
338 339 8.286800 CCATCGACACAAACTACAAGAATAAAA 58.713 33.333 0.00 0.00 0.00 1.52
339 340 9.658475 CATCGACACAAACTACAAGAATAAAAA 57.342 29.630 0.00 0.00 0.00 1.94
354 355 3.462427 AAAAACAAAACCGCACCCC 57.538 47.368 0.00 0.00 0.00 4.95
355 356 0.613777 AAAAACAAAACCGCACCCCA 59.386 45.000 0.00 0.00 0.00 4.96
356 357 0.108089 AAAACAAAACCGCACCCCAC 60.108 50.000 0.00 0.00 0.00 4.61
357 358 1.962321 AAACAAAACCGCACCCCACC 61.962 55.000 0.00 0.00 0.00 4.61
358 359 3.611674 CAAAACCGCACCCCACCC 61.612 66.667 0.00 0.00 0.00 4.61
359 360 4.926162 AAAACCGCACCCCACCCC 62.926 66.667 0.00 0.00 0.00 4.95
374 375 4.047125 CCCGCACCCATCCCACTT 62.047 66.667 0.00 0.00 0.00 3.16
375 376 2.438434 CCGCACCCATCCCACTTC 60.438 66.667 0.00 0.00 0.00 3.01
376 377 2.671070 CGCACCCATCCCACTTCT 59.329 61.111 0.00 0.00 0.00 2.85
377 378 1.622607 CCGCACCCATCCCACTTCTA 61.623 60.000 0.00 0.00 0.00 2.10
378 379 0.462047 CGCACCCATCCCACTTCTAC 60.462 60.000 0.00 0.00 0.00 2.59
379 380 0.107165 GCACCCATCCCACTTCTACC 60.107 60.000 0.00 0.00 0.00 3.18
380 381 0.546598 CACCCATCCCACTTCTACCC 59.453 60.000 0.00 0.00 0.00 3.69
381 382 0.120377 ACCCATCCCACTTCTACCCA 59.880 55.000 0.00 0.00 0.00 4.51
382 383 0.546598 CCCATCCCACTTCTACCCAC 59.453 60.000 0.00 0.00 0.00 4.61
383 384 0.546598 CCATCCCACTTCTACCCACC 59.453 60.000 0.00 0.00 0.00 4.61
384 385 1.584724 CATCCCACTTCTACCCACCT 58.415 55.000 0.00 0.00 0.00 4.00
385 386 1.916181 CATCCCACTTCTACCCACCTT 59.084 52.381 0.00 0.00 0.00 3.50
386 387 1.652947 TCCCACTTCTACCCACCTTC 58.347 55.000 0.00 0.00 0.00 3.46
387 388 1.151413 TCCCACTTCTACCCACCTTCT 59.849 52.381 0.00 0.00 0.00 2.85
388 389 1.985895 CCCACTTCTACCCACCTTCTT 59.014 52.381 0.00 0.00 0.00 2.52
389 390 2.027100 CCCACTTCTACCCACCTTCTTC 60.027 54.545 0.00 0.00 0.00 2.87
390 391 2.027100 CCACTTCTACCCACCTTCTTCC 60.027 54.545 0.00 0.00 0.00 3.46
391 392 2.027100 CACTTCTACCCACCTTCTTCCC 60.027 54.545 0.00 0.00 0.00 3.97
392 393 1.560146 CTTCTACCCACCTTCTTCCCC 59.440 57.143 0.00 0.00 0.00 4.81
393 394 0.253020 TCTACCCACCTTCTTCCCCC 60.253 60.000 0.00 0.00 0.00 5.40
394 395 0.253207 CTACCCACCTTCTTCCCCCT 60.253 60.000 0.00 0.00 0.00 4.79
395 396 0.253020 TACCCACCTTCTTCCCCCTC 60.253 60.000 0.00 0.00 0.00 4.30
396 397 2.309504 CCCACCTTCTTCCCCCTCC 61.310 68.421 0.00 0.00 0.00 4.30
397 398 2.309504 CCACCTTCTTCCCCCTCCC 61.310 68.421 0.00 0.00 0.00 4.30
398 399 2.127528 ACCTTCTTCCCCCTCCCC 59.872 66.667 0.00 0.00 0.00 4.81
399 400 3.090532 CCTTCTTCCCCCTCCCCG 61.091 72.222 0.00 0.00 0.00 5.73
400 401 3.798511 CTTCTTCCCCCTCCCCGC 61.799 72.222 0.00 0.00 0.00 6.13
410 411 4.794648 CTCCCCGCGCCCAAATCA 62.795 66.667 0.00 0.00 0.00 2.57
411 412 4.352607 TCCCCGCGCCCAAATCAA 62.353 61.111 0.00 0.00 0.00 2.57
412 413 3.377759 CCCCGCGCCCAAATCAAA 61.378 61.111 0.00 0.00 0.00 2.69
413 414 2.126110 CCCGCGCCCAAATCAAAC 60.126 61.111 0.00 0.00 0.00 2.93
414 415 2.126110 CCGCGCCCAAATCAAACC 60.126 61.111 0.00 0.00 0.00 3.27
415 416 2.503809 CGCGCCCAAATCAAACCG 60.504 61.111 0.00 0.00 0.00 4.44
416 417 2.126110 GCGCCCAAATCAAACCGG 60.126 61.111 0.00 0.00 0.00 5.28
417 418 2.926420 GCGCCCAAATCAAACCGGT 61.926 57.895 0.00 0.00 0.00 5.28
418 419 1.080839 CGCCCAAATCAAACCGGTG 60.081 57.895 8.52 0.00 0.00 4.94
419 420 1.291906 GCCCAAATCAAACCGGTGG 59.708 57.895 8.52 3.46 0.00 4.61
420 421 1.291906 CCCAAATCAAACCGGTGGC 59.708 57.895 8.52 0.00 0.00 5.01
421 422 1.467678 CCCAAATCAAACCGGTGGCA 61.468 55.000 8.52 0.00 0.00 4.92
422 423 0.390860 CCAAATCAAACCGGTGGCAA 59.609 50.000 8.52 0.00 0.00 4.52
423 424 1.496934 CAAATCAAACCGGTGGCAAC 58.503 50.000 8.52 0.00 0.00 4.17
424 425 0.391228 AAATCAAACCGGTGGCAACC 59.609 50.000 8.52 0.00 43.76 3.77
441 442 4.711949 CACCAGCGCTGCCCTTCT 62.712 66.667 31.96 6.03 0.00 2.85
442 443 3.958860 ACCAGCGCTGCCCTTCTT 61.959 61.111 31.96 6.09 0.00 2.52
443 444 3.437795 CCAGCGCTGCCCTTCTTG 61.438 66.667 31.96 11.77 0.00 3.02
444 445 4.112341 CAGCGCTGCCCTTCTTGC 62.112 66.667 26.68 0.00 0.00 4.01
445 446 4.341783 AGCGCTGCCCTTCTTGCT 62.342 61.111 10.39 0.00 0.00 3.91
446 447 3.808656 GCGCTGCCCTTCTTGCTC 61.809 66.667 0.00 0.00 0.00 4.26
447 448 3.130160 CGCTGCCCTTCTTGCTCC 61.130 66.667 0.00 0.00 0.00 4.70
448 449 2.753446 GCTGCCCTTCTTGCTCCC 60.753 66.667 0.00 0.00 0.00 4.30
449 450 2.044551 CTGCCCTTCTTGCTCCCC 60.045 66.667 0.00 0.00 0.00 4.81
450 451 3.651980 CTGCCCTTCTTGCTCCCCC 62.652 68.421 0.00 0.00 0.00 5.40
451 452 4.803908 GCCCTTCTTGCTCCCCCG 62.804 72.222 0.00 0.00 0.00 5.73
452 453 4.803908 CCCTTCTTGCTCCCCCGC 62.804 72.222 0.00 0.00 0.00 6.13
453 454 3.721706 CCTTCTTGCTCCCCCGCT 61.722 66.667 0.00 0.00 0.00 5.52
454 455 2.437359 CTTCTTGCTCCCCCGCTG 60.437 66.667 0.00 0.00 0.00 5.18
455 456 4.722700 TTCTTGCTCCCCCGCTGC 62.723 66.667 0.00 0.00 0.00 5.25
461 462 4.785453 CTCCCCCGCTGCCTTCAC 62.785 72.222 0.00 0.00 0.00 3.18
464 465 4.351054 CCCCGCTGCCTTCACCTT 62.351 66.667 0.00 0.00 0.00 3.50
465 466 2.747855 CCCGCTGCCTTCACCTTC 60.748 66.667 0.00 0.00 0.00 3.46
466 467 2.747855 CCGCTGCCTTCACCTTCC 60.748 66.667 0.00 0.00 0.00 3.46
467 468 2.747855 CGCTGCCTTCACCTTCCC 60.748 66.667 0.00 0.00 0.00 3.97
468 469 2.361737 GCTGCCTTCACCTTCCCC 60.362 66.667 0.00 0.00 0.00 4.81
469 470 2.911926 GCTGCCTTCACCTTCCCCT 61.912 63.158 0.00 0.00 0.00 4.79
470 471 1.301293 CTGCCTTCACCTTCCCCTC 59.699 63.158 0.00 0.00 0.00 4.30
471 472 2.203549 CTGCCTTCACCTTCCCCTCC 62.204 65.000 0.00 0.00 0.00 4.30
472 473 2.985116 GCCTTCACCTTCCCCTCCC 61.985 68.421 0.00 0.00 0.00 4.30
473 474 2.309504 CCTTCACCTTCCCCTCCCC 61.310 68.421 0.00 0.00 0.00 4.81
474 475 1.229984 CTTCACCTTCCCCTCCCCT 60.230 63.158 0.00 0.00 0.00 4.79
475 476 0.846870 CTTCACCTTCCCCTCCCCTT 60.847 60.000 0.00 0.00 0.00 3.95
476 477 0.845102 TTCACCTTCCCCTCCCCTTC 60.845 60.000 0.00 0.00 0.00 3.46
477 478 2.127528 ACCTTCCCCTCCCCTTCC 59.872 66.667 0.00 0.00 0.00 3.46
478 479 2.696504 CCTTCCCCTCCCCTTCCC 60.697 72.222 0.00 0.00 0.00 3.97
479 480 2.696504 CTTCCCCTCCCCTTCCCC 60.697 72.222 0.00 0.00 0.00 4.81
480 481 4.381121 TTCCCCTCCCCTTCCCCC 62.381 72.222 0.00 0.00 0.00 5.40
484 485 4.371231 CCTCCCCTTCCCCCACCT 62.371 72.222 0.00 0.00 0.00 4.00
485 486 2.692741 CTCCCCTTCCCCCACCTC 60.693 72.222 0.00 0.00 0.00 3.85
486 487 4.364686 TCCCCTTCCCCCACCTCC 62.365 72.222 0.00 0.00 0.00 4.30
487 488 4.693915 CCCCTTCCCCCACCTCCA 62.694 72.222 0.00 0.00 0.00 3.86
488 489 3.339093 CCCTTCCCCCACCTCCAC 61.339 72.222 0.00 0.00 0.00 4.02
489 490 3.339093 CCTTCCCCCACCTCCACC 61.339 72.222 0.00 0.00 0.00 4.61
490 491 3.339093 CTTCCCCCACCTCCACCC 61.339 72.222 0.00 0.00 0.00 4.61
974 975 0.814010 GCCGCCGGATTTGTGATAGT 60.814 55.000 7.68 0.00 0.00 2.12
980 981 1.593006 CGGATTTGTGATAGTCCACGC 59.407 52.381 0.00 0.00 39.80 5.34
992 993 2.203280 CCACGCCTTCAACCACCA 60.203 61.111 0.00 0.00 0.00 4.17
997 998 1.525077 GCCTTCAACCACCACGACA 60.525 57.895 0.00 0.00 0.00 4.35
1005 1006 1.451927 CCACCACGACATGATGGGG 60.452 63.158 16.30 12.76 40.59 4.96
1009 1010 1.377072 CACGACATGATGGGGTGCA 60.377 57.895 0.00 0.00 0.00 4.57
1026 1027 0.038166 GCAGGATCAGGGTGGTTTCA 59.962 55.000 0.00 0.00 0.00 2.69
1085 1086 3.237741 CCTCCTCCCGGATGCCTC 61.238 72.222 0.73 0.00 39.01 4.70
1158 1159 1.456705 GATCCGTGCTCTCTCCCCT 60.457 63.158 0.00 0.00 0.00 4.79
1161 1162 3.073735 CGTGCTCTCTCCCCTGCT 61.074 66.667 0.00 0.00 0.00 4.24
1194 1195 4.789075 CCACCGGCCGTGACTACG 62.789 72.222 26.12 9.27 46.20 3.51
1281 1282 2.027073 TTGTGGAGACGCGCATGAC 61.027 57.895 5.73 0.00 46.31 3.06
1344 1345 2.287251 CCTCTCCCCTTCCCCGAT 59.713 66.667 0.00 0.00 0.00 4.18
1347 1348 0.983378 CTCTCCCCTTCCCCGATGTT 60.983 60.000 0.00 0.00 0.00 2.71
1352 1353 1.562672 CCCTTCCCCGATGTTCCACT 61.563 60.000 0.00 0.00 0.00 4.00
1353 1354 1.200519 CCTTCCCCGATGTTCCACTA 58.799 55.000 0.00 0.00 0.00 2.74
1374 1375 2.918802 ACACCCGTCGGTAAGCCA 60.919 61.111 11.06 0.00 42.04 4.75
1375 1376 2.344500 CACCCGTCGGTAAGCCAA 59.656 61.111 11.06 0.00 42.04 4.52
1396 1397 0.677731 CCTTGGCGCTCCATCTTCAA 60.678 55.000 7.64 0.00 43.05 2.69
1397 1398 1.386533 CTTGGCGCTCCATCTTCAAT 58.613 50.000 7.64 0.00 43.05 2.57
1415 1416 4.719369 GGCTGTCTTCGACGCGGT 62.719 66.667 12.47 0.00 34.95 5.68
1429 1430 1.006805 GCGGTCGCTCTATGATGCT 60.007 57.895 8.20 0.00 38.26 3.79
1488 1489 7.610305 ACTGTTCAGTTTTCTTGTTTTCCTCTA 59.390 33.333 0.00 0.00 0.00 2.43
1494 1495 3.261981 TCTTGTTTTCCTCTATCGCCC 57.738 47.619 0.00 0.00 0.00 6.13
1495 1496 1.933853 CTTGTTTTCCTCTATCGCCCG 59.066 52.381 0.00 0.00 0.00 6.13
1511 1512 1.487231 CCGCGAACAGTCAAAGACG 59.513 57.895 8.23 0.00 37.67 4.18
1517 1518 2.776225 CGAACAGTCAAAGACGCAAAAC 59.224 45.455 0.00 0.00 37.67 2.43
1585 1586 3.974401 CCGCTATGTTGTTTGTTCTTGTG 59.026 43.478 0.00 0.00 0.00 3.33
1623 1624 1.550327 TGCAGAGAGAAGACGACCAT 58.450 50.000 0.00 0.00 0.00 3.55
1633 1634 5.588648 AGAGAAGACGACCATCAAAAACAAA 59.411 36.000 0.00 0.00 0.00 2.83
1650 1651 1.068055 CAAAGGAGTTGGCTGTGATGC 60.068 52.381 0.00 0.00 33.18 3.91
1698 1707 2.596046 TTGGCACGCGATGGGTTT 60.596 55.556 15.93 0.00 0.00 3.27
1699 1708 2.801113 CTTGGCACGCGATGGGTTTG 62.801 60.000 15.93 0.00 0.00 2.93
1718 1727 0.392998 GGGTGTGAAGATGCGATGGT 60.393 55.000 0.00 0.00 0.00 3.55
1814 1823 6.691754 TGTTTACAAAAGCAGTTCATCTCA 57.308 33.333 0.00 0.00 0.00 3.27
1875 1884 4.327680 GCTATTCTTGAGGTTCAGGTTGT 58.672 43.478 0.00 0.00 0.00 3.32
1882 1891 3.314693 TGAGGTTCAGGTTGTAGTTCCT 58.685 45.455 0.00 0.00 33.96 3.36
1890 1899 2.498078 AGGTTGTAGTTCCTGAGCTAGC 59.502 50.000 6.62 6.62 32.29 3.42
1891 1900 2.498078 GGTTGTAGTTCCTGAGCTAGCT 59.502 50.000 19.45 19.45 0.00 3.32
1892 1901 3.700038 GGTTGTAGTTCCTGAGCTAGCTA 59.300 47.826 19.38 0.00 0.00 3.32
1893 1902 4.342665 GGTTGTAGTTCCTGAGCTAGCTAT 59.657 45.833 19.38 0.00 0.00 2.97
1894 1903 5.163395 GGTTGTAGTTCCTGAGCTAGCTATT 60.163 44.000 19.38 0.47 0.00 1.73
1895 1904 5.776173 TGTAGTTCCTGAGCTAGCTATTC 57.224 43.478 19.38 6.35 0.00 1.75
1896 1905 5.450453 TGTAGTTCCTGAGCTAGCTATTCT 58.550 41.667 19.38 12.36 0.00 2.40
1897 1906 5.894393 TGTAGTTCCTGAGCTAGCTATTCTT 59.106 40.000 19.38 3.17 0.00 2.52
1898 1907 5.275067 AGTTCCTGAGCTAGCTATTCTTG 57.725 43.478 19.38 3.59 0.00 3.02
1899 1908 4.959210 AGTTCCTGAGCTAGCTATTCTTGA 59.041 41.667 19.38 6.02 0.00 3.02
1900 1909 5.068987 AGTTCCTGAGCTAGCTATTCTTGAG 59.931 44.000 19.38 5.07 0.00 3.02
1901 1910 3.894427 TCCTGAGCTAGCTATTCTTGAGG 59.106 47.826 19.38 13.44 0.00 3.86
1902 1911 3.640967 CCTGAGCTAGCTATTCTTGAGGT 59.359 47.826 19.38 0.00 0.00 3.85
1903 1912 4.100808 CCTGAGCTAGCTATTCTTGAGGTT 59.899 45.833 19.38 0.00 0.00 3.50
1904 1913 5.269505 TGAGCTAGCTATTCTTGAGGTTC 57.730 43.478 19.38 0.66 0.00 3.62
1905 1914 4.711846 TGAGCTAGCTATTCTTGAGGTTCA 59.288 41.667 19.38 3.65 0.00 3.18
1906 1915 5.163468 TGAGCTAGCTATTCTTGAGGTTCAG 60.163 44.000 19.38 0.00 0.00 3.02
1907 1916 4.100808 AGCTAGCTATTCTTGAGGTTCAGG 59.899 45.833 17.69 0.00 0.00 3.86
1908 1917 4.141824 GCTAGCTATTCTTGAGGTTCAGGT 60.142 45.833 7.70 0.00 0.00 4.00
1909 1918 4.917906 AGCTATTCTTGAGGTTCAGGTT 57.082 40.909 0.00 0.00 0.00 3.50
1910 1919 4.583871 AGCTATTCTTGAGGTTCAGGTTG 58.416 43.478 0.00 0.00 0.00 3.77
1911 1920 3.127721 GCTATTCTTGAGGTTCAGGTTGC 59.872 47.826 0.00 0.00 0.00 4.17
1912 1921 2.727123 TTCTTGAGGTTCAGGTTGCA 57.273 45.000 0.00 0.00 0.00 4.08
1913 1922 2.260844 TCTTGAGGTTCAGGTTGCAG 57.739 50.000 0.00 0.00 0.00 4.41
1914 1923 1.490490 TCTTGAGGTTCAGGTTGCAGT 59.510 47.619 0.00 0.00 0.00 4.40
1915 1924 2.092429 TCTTGAGGTTCAGGTTGCAGTT 60.092 45.455 0.00 0.00 0.00 3.16
1916 1925 1.967319 TGAGGTTCAGGTTGCAGTTC 58.033 50.000 0.00 0.00 0.00 3.01
1917 1926 1.211703 TGAGGTTCAGGTTGCAGTTCA 59.788 47.619 0.00 0.00 0.00 3.18
1998 2007 6.604795 CCCAGGATATTCATTTGAAGTTCACT 59.395 38.462 4.68 0.00 37.48 3.41
1999 2008 7.201767 CCCAGGATATTCATTTGAAGTTCACTC 60.202 40.741 4.68 0.00 37.48 3.51
2000 2009 7.337689 CCAGGATATTCATTTGAAGTTCACTCA 59.662 37.037 4.68 0.00 37.48 3.41
2001 2010 8.900781 CAGGATATTCATTTGAAGTTCACTCAT 58.099 33.333 4.68 0.00 37.48 2.90
2002 2011 9.471702 AGGATATTCATTTGAAGTTCACTCATT 57.528 29.630 4.68 0.00 37.48 2.57
2035 2044 9.695526 TTTTCTTCTGGAAATCATTTGTATGTG 57.304 29.630 0.00 0.00 42.63 3.21
2036 2045 6.855836 TCTTCTGGAAATCATTTGTATGTGC 58.144 36.000 0.00 0.00 33.34 4.57
2037 2046 6.660521 TCTTCTGGAAATCATTTGTATGTGCT 59.339 34.615 0.00 0.00 33.34 4.40
2038 2047 6.441093 TCTGGAAATCATTTGTATGTGCTC 57.559 37.500 0.00 0.00 33.34 4.26
2039 2048 5.945191 TCTGGAAATCATTTGTATGTGCTCA 59.055 36.000 0.00 0.00 33.34 4.26
2040 2049 6.094464 TCTGGAAATCATTTGTATGTGCTCAG 59.906 38.462 0.00 0.00 33.34 3.35
2041 2050 5.711506 TGGAAATCATTTGTATGTGCTCAGT 59.288 36.000 0.00 0.00 33.34 3.41
2042 2051 6.883756 TGGAAATCATTTGTATGTGCTCAGTA 59.116 34.615 0.00 0.00 33.34 2.74
2043 2052 7.392953 TGGAAATCATTTGTATGTGCTCAGTAA 59.607 33.333 0.00 0.00 33.34 2.24
2044 2053 7.698130 GGAAATCATTTGTATGTGCTCAGTAAC 59.302 37.037 0.00 0.00 33.34 2.50
2045 2054 7.928307 AATCATTTGTATGTGCTCAGTAACT 57.072 32.000 0.00 0.00 33.34 2.24
2046 2055 9.448438 AAATCATTTGTATGTGCTCAGTAACTA 57.552 29.630 0.00 0.00 33.34 2.24
2047 2056 9.448438 AATCATTTGTATGTGCTCAGTAACTAA 57.552 29.630 0.00 0.00 33.34 2.24
2048 2057 8.479313 TCATTTGTATGTGCTCAGTAACTAAG 57.521 34.615 0.00 0.00 33.34 2.18
2049 2058 8.311109 TCATTTGTATGTGCTCAGTAACTAAGA 58.689 33.333 0.00 0.00 33.34 2.10
2050 2059 8.598924 CATTTGTATGTGCTCAGTAACTAAGAG 58.401 37.037 0.00 0.00 0.00 2.85
2051 2060 7.462571 TTGTATGTGCTCAGTAACTAAGAGA 57.537 36.000 0.00 0.00 0.00 3.10
2052 2061 7.462571 TGTATGTGCTCAGTAACTAAGAGAA 57.537 36.000 0.00 0.00 0.00 2.87
2053 2062 7.539436 TGTATGTGCTCAGTAACTAAGAGAAG 58.461 38.462 0.00 0.00 0.00 2.85
2054 2063 6.842437 ATGTGCTCAGTAACTAAGAGAAGA 57.158 37.500 0.00 0.00 0.00 2.87
2055 2064 6.260870 TGTGCTCAGTAACTAAGAGAAGAG 57.739 41.667 0.00 0.00 0.00 2.85
2056 2065 6.004574 TGTGCTCAGTAACTAAGAGAAGAGA 58.995 40.000 0.00 0.00 0.00 3.10
2057 2066 6.490381 TGTGCTCAGTAACTAAGAGAAGAGAA 59.510 38.462 0.00 0.00 0.00 2.87
2058 2067 6.804783 GTGCTCAGTAACTAAGAGAAGAGAAC 59.195 42.308 0.00 0.00 0.00 3.01
2059 2068 6.490381 TGCTCAGTAACTAAGAGAAGAGAACA 59.510 38.462 0.00 0.00 0.00 3.18
2060 2069 7.177568 TGCTCAGTAACTAAGAGAAGAGAACAT 59.822 37.037 0.00 0.00 0.00 2.71
2061 2070 7.700656 GCTCAGTAACTAAGAGAAGAGAACATC 59.299 40.741 0.00 0.00 0.00 3.06
2062 2071 8.637196 TCAGTAACTAAGAGAAGAGAACATCA 57.363 34.615 0.00 0.00 0.00 3.07
2063 2072 9.078990 TCAGTAACTAAGAGAAGAGAACATCAA 57.921 33.333 0.00 0.00 0.00 2.57
2064 2073 9.868277 CAGTAACTAAGAGAAGAGAACATCAAT 57.132 33.333 0.00 0.00 0.00 2.57
2065 2074 9.868277 AGTAACTAAGAGAAGAGAACATCAATG 57.132 33.333 0.00 0.00 0.00 2.82
2066 2075 9.646427 GTAACTAAGAGAAGAGAACATCAATGT 57.354 33.333 0.00 0.00 44.20 2.71
2080 2089 6.083098 ACATCAATGTTCATTTTGTTCGGA 57.917 33.333 0.00 0.00 37.90 4.55
2081 2090 6.151691 ACATCAATGTTCATTTTGTTCGGAG 58.848 36.000 0.00 0.00 37.90 4.63
2082 2091 6.016360 ACATCAATGTTCATTTTGTTCGGAGA 60.016 34.615 0.00 0.00 37.90 3.71
2083 2092 6.384258 TCAATGTTCATTTTGTTCGGAGAA 57.616 33.333 0.00 0.00 45.90 2.87
2084 2093 6.800543 TCAATGTTCATTTTGTTCGGAGAAA 58.199 32.000 0.00 0.00 45.90 2.52
2085 2094 7.261325 TCAATGTTCATTTTGTTCGGAGAAAA 58.739 30.769 0.62 0.62 45.90 2.29
2086 2095 7.761704 TCAATGTTCATTTTGTTCGGAGAAAAA 59.238 29.630 2.48 0.00 45.90 1.94
2104 2113 4.335400 AAAAAGGCAGTAACACCATTGG 57.665 40.909 0.00 0.00 0.00 3.16
2105 2114 2.969821 AAGGCAGTAACACCATTGGA 57.030 45.000 10.37 0.00 0.00 3.53
2106 2115 2.969821 AGGCAGTAACACCATTGGAA 57.030 45.000 10.37 0.00 0.00 3.53
2107 2116 3.237268 AGGCAGTAACACCATTGGAAA 57.763 42.857 10.37 0.00 0.00 3.13
2110 2119 4.076394 GGCAGTAACACCATTGGAAAGTA 58.924 43.478 10.37 0.00 0.00 2.24
2250 2409 8.590204 TCTTGTAAGTGACCATTTGATGTAGTA 58.410 33.333 0.00 0.00 0.00 1.82
2286 2445 2.282674 AGTGCGGTCGGGTGTCTA 60.283 61.111 0.00 0.00 0.00 2.59
2289 2448 0.390735 GTGCGGTCGGGTGTCTAATT 60.391 55.000 0.00 0.00 0.00 1.40
2290 2449 1.135024 GTGCGGTCGGGTGTCTAATTA 60.135 52.381 0.00 0.00 0.00 1.40
2335 2494 8.246180 CCATTTGATGTAGTGCAGTTTTCTAAT 58.754 33.333 0.00 1.26 0.00 1.73
2351 2583 2.076100 CTAATTGAAGCAGTGCGGTCA 58.924 47.619 17.47 17.47 0.00 4.02
2404 2713 5.627780 GCAAAGAAAATGTTACCGAAACGAT 59.372 36.000 0.00 0.00 41.30 3.73
2455 2764 2.227194 CTTTTGGGGTTCACTTACGCT 58.773 47.619 0.00 0.00 0.00 5.07
2486 2796 0.174845 CCCGTTCACTTCCTCGCATA 59.825 55.000 0.00 0.00 0.00 3.14
2488 2798 2.343101 CCGTTCACTTCCTCGCATAAA 58.657 47.619 0.00 0.00 0.00 1.40
2554 2867 3.255969 TCTAATGAGGTGCGGTTTACC 57.744 47.619 0.00 0.00 38.52 2.85
2608 2923 2.798283 GTTCACTCGTCGATTTTGGTGA 59.202 45.455 9.46 9.46 32.87 4.02
2650 2965 8.552865 GTCCGCATTTTGGTAAATTTAAAACTT 58.447 29.630 0.00 0.00 31.63 2.66
2702 3017 6.606234 TGTTCTACATGAAAAAGTTGCGTA 57.394 33.333 0.00 0.00 36.30 4.42
2797 3113 1.737735 CGCTGCCACTCATCGTCAA 60.738 57.895 0.00 0.00 30.40 3.18
2804 3120 1.270305 CCACTCATCGTCAACCACACT 60.270 52.381 0.00 0.00 0.00 3.55
2811 3127 4.693566 TCATCGTCAACCACACTATTTTCC 59.306 41.667 0.00 0.00 0.00 3.13
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 3.376859 TCAATAACCAATAGCGCAACCTG 59.623 43.478 11.47 0.40 0.00 4.00
1 2 3.377172 GTCAATAACCAATAGCGCAACCT 59.623 43.478 11.47 0.00 0.00 3.50
2 3 3.691498 GTCAATAACCAATAGCGCAACC 58.309 45.455 11.47 0.00 0.00 3.77
23 24 0.609406 TGACCGAGACACCTCTCTGG 60.609 60.000 0.00 6.91 40.96 3.86
24 25 1.133982 CATGACCGAGACACCTCTCTG 59.866 57.143 0.00 0.00 40.96 3.35
25 26 1.272203 ACATGACCGAGACACCTCTCT 60.272 52.381 0.00 0.00 40.96 3.10
26 27 1.133407 GACATGACCGAGACACCTCTC 59.867 57.143 0.00 0.00 39.86 3.20
27 28 1.178276 GACATGACCGAGACACCTCT 58.822 55.000 0.00 0.00 37.28 3.69
28 29 1.178276 AGACATGACCGAGACACCTC 58.822 55.000 0.00 0.00 36.08 3.85
29 30 2.093106 GTAGACATGACCGAGACACCT 58.907 52.381 0.00 0.00 0.00 4.00
30 31 1.816835 TGTAGACATGACCGAGACACC 59.183 52.381 0.00 0.00 0.00 4.16
31 32 3.784701 ATGTAGACATGACCGAGACAC 57.215 47.619 0.00 0.00 34.83 3.67
32 33 4.777463 TCTATGTAGACATGACCGAGACA 58.223 43.478 0.00 0.00 37.15 3.41
33 34 5.703592 AGATCTATGTAGACATGACCGAGAC 59.296 44.000 0.00 0.00 37.15 3.36
34 35 5.870706 AGATCTATGTAGACATGACCGAGA 58.129 41.667 0.00 0.54 37.15 4.04
35 36 5.163903 CGAGATCTATGTAGACATGACCGAG 60.164 48.000 0.00 0.00 37.15 4.63
36 37 4.691216 CGAGATCTATGTAGACATGACCGA 59.309 45.833 0.00 0.00 37.15 4.69
37 38 4.691216 TCGAGATCTATGTAGACATGACCG 59.309 45.833 0.00 6.34 37.15 4.79
38 39 6.375377 GTTCGAGATCTATGTAGACATGACC 58.625 44.000 0.00 0.00 37.15 4.02
39 40 6.205853 AGGTTCGAGATCTATGTAGACATGAC 59.794 42.308 0.00 0.00 37.15 3.06
40 41 6.205658 CAGGTTCGAGATCTATGTAGACATGA 59.794 42.308 0.00 2.08 37.15 3.07
41 42 6.016693 ACAGGTTCGAGATCTATGTAGACATG 60.017 42.308 5.39 0.00 37.15 3.21
42 43 6.065374 ACAGGTTCGAGATCTATGTAGACAT 58.935 40.000 0.00 0.08 40.22 3.06
43 44 5.437946 ACAGGTTCGAGATCTATGTAGACA 58.562 41.667 0.00 0.00 34.72 3.41
44 45 6.148150 CCTACAGGTTCGAGATCTATGTAGAC 59.852 46.154 19.14 6.16 40.52 2.59
45 46 6.042897 TCCTACAGGTTCGAGATCTATGTAGA 59.957 42.308 19.14 0.00 40.52 2.59
46 47 6.231951 TCCTACAGGTTCGAGATCTATGTAG 58.768 44.000 0.00 7.74 38.75 2.74
47 48 6.183810 TCCTACAGGTTCGAGATCTATGTA 57.816 41.667 0.00 0.00 36.34 2.29
48 49 5.050126 TCCTACAGGTTCGAGATCTATGT 57.950 43.478 0.00 0.00 36.34 2.29
49 50 5.124776 GGATCCTACAGGTTCGAGATCTATG 59.875 48.000 3.84 0.00 35.30 2.23
50 51 5.258051 GGATCCTACAGGTTCGAGATCTAT 58.742 45.833 3.84 0.00 35.30 1.98
51 52 4.653868 GGATCCTACAGGTTCGAGATCTA 58.346 47.826 3.84 0.00 35.30 1.98
52 53 3.492337 GGATCCTACAGGTTCGAGATCT 58.508 50.000 3.84 0.00 35.30 2.75
53 54 2.226912 CGGATCCTACAGGTTCGAGATC 59.773 54.545 10.75 0.00 35.30 2.75
54 55 2.231529 CGGATCCTACAGGTTCGAGAT 58.768 52.381 10.75 0.00 35.30 2.75
55 56 1.676746 CGGATCCTACAGGTTCGAGA 58.323 55.000 10.75 0.00 35.30 4.04
56 57 0.030908 GCGGATCCTACAGGTTCGAG 59.969 60.000 10.75 0.00 35.30 4.04
57 58 0.681887 TGCGGATCCTACAGGTTCGA 60.682 55.000 10.75 0.00 35.30 3.71
58 59 0.527817 GTGCGGATCCTACAGGTTCG 60.528 60.000 10.75 0.00 35.30 3.95
59 60 0.527817 CGTGCGGATCCTACAGGTTC 60.528 60.000 10.75 0.00 36.34 3.62
60 61 1.515954 CGTGCGGATCCTACAGGTT 59.484 57.895 10.75 0.00 36.34 3.50
61 62 3.077519 GCGTGCGGATCCTACAGGT 62.078 63.158 19.42 0.00 36.34 4.00
62 63 2.279517 GCGTGCGGATCCTACAGG 60.280 66.667 10.75 14.03 0.00 4.00
63 64 0.384309 TAAGCGTGCGGATCCTACAG 59.616 55.000 10.75 6.80 0.00 2.74
64 65 0.818938 TTAAGCGTGCGGATCCTACA 59.181 50.000 10.75 5.13 0.00 2.74
65 66 1.792949 CATTAAGCGTGCGGATCCTAC 59.207 52.381 10.75 8.01 0.00 3.18
66 67 1.411246 ACATTAAGCGTGCGGATCCTA 59.589 47.619 10.75 0.00 0.00 2.94
67 68 0.178068 ACATTAAGCGTGCGGATCCT 59.822 50.000 10.75 0.00 0.00 3.24
68 69 1.014352 AACATTAAGCGTGCGGATCC 58.986 50.000 0.00 0.00 0.00 3.36
69 70 2.095213 TCAAACATTAAGCGTGCGGATC 59.905 45.455 0.00 0.00 0.00 3.36
70 71 2.080693 TCAAACATTAAGCGTGCGGAT 58.919 42.857 0.00 0.00 0.00 4.18
71 72 1.514003 TCAAACATTAAGCGTGCGGA 58.486 45.000 0.00 0.00 0.00 5.54
72 73 2.159585 TCATCAAACATTAAGCGTGCGG 60.160 45.455 0.00 0.00 0.00 5.69
73 74 2.840176 GTCATCAAACATTAAGCGTGCG 59.160 45.455 0.00 0.00 0.00 5.34
74 75 2.840176 CGTCATCAAACATTAAGCGTGC 59.160 45.455 0.00 0.00 0.00 5.34
75 76 4.320667 TCGTCATCAAACATTAAGCGTG 57.679 40.909 0.00 0.00 0.00 5.34
76 77 4.391830 ACATCGTCATCAAACATTAAGCGT 59.608 37.500 0.00 0.00 0.00 5.07
77 78 4.897224 ACATCGTCATCAAACATTAAGCG 58.103 39.130 0.00 0.00 0.00 4.68
78 79 6.901887 CACTACATCGTCATCAAACATTAAGC 59.098 38.462 0.00 0.00 0.00 3.09
79 80 7.963981 ACACTACATCGTCATCAAACATTAAG 58.036 34.615 0.00 0.00 0.00 1.85
80 81 7.899178 ACACTACATCGTCATCAAACATTAA 57.101 32.000 0.00 0.00 0.00 1.40
81 82 7.899178 AACACTACATCGTCATCAAACATTA 57.101 32.000 0.00 0.00 0.00 1.90
82 83 6.801539 AACACTACATCGTCATCAAACATT 57.198 33.333 0.00 0.00 0.00 2.71
83 84 9.764363 ATATAACACTACATCGTCATCAAACAT 57.236 29.630 0.00 0.00 0.00 2.71
84 85 9.030301 CATATAACACTACATCGTCATCAAACA 57.970 33.333 0.00 0.00 0.00 2.83
85 86 9.244799 TCATATAACACTACATCGTCATCAAAC 57.755 33.333 0.00 0.00 0.00 2.93
86 87 9.463443 CTCATATAACACTACATCGTCATCAAA 57.537 33.333 0.00 0.00 0.00 2.69
87 88 8.630037 ACTCATATAACACTACATCGTCATCAA 58.370 33.333 0.00 0.00 0.00 2.57
88 89 8.166422 ACTCATATAACACTACATCGTCATCA 57.834 34.615 0.00 0.00 0.00 3.07
91 92 9.893305 CATAACTCATATAACACTACATCGTCA 57.107 33.333 0.00 0.00 0.00 4.35
92 93 9.894783 ACATAACTCATATAACACTACATCGTC 57.105 33.333 0.00 0.00 0.00 4.20
93 94 9.678941 CACATAACTCATATAACACTACATCGT 57.321 33.333 0.00 0.00 0.00 3.73
94 95 9.893305 TCACATAACTCATATAACACTACATCG 57.107 33.333 0.00 0.00 0.00 3.84
100 101 9.905713 ACCAAATCACATAACTCATATAACACT 57.094 29.630 0.00 0.00 0.00 3.55
101 102 9.935682 CACCAAATCACATAACTCATATAACAC 57.064 33.333 0.00 0.00 0.00 3.32
102 103 9.898152 TCACCAAATCACATAACTCATATAACA 57.102 29.630 0.00 0.00 0.00 2.41
104 105 9.337396 GGTCACCAAATCACATAACTCATATAA 57.663 33.333 0.00 0.00 0.00 0.98
105 106 7.655732 CGGTCACCAAATCACATAACTCATATA 59.344 37.037 0.00 0.00 0.00 0.86
106 107 6.483307 CGGTCACCAAATCACATAACTCATAT 59.517 38.462 0.00 0.00 0.00 1.78
107 108 5.815222 CGGTCACCAAATCACATAACTCATA 59.185 40.000 0.00 0.00 0.00 2.15
108 109 4.635765 CGGTCACCAAATCACATAACTCAT 59.364 41.667 0.00 0.00 0.00 2.90
109 110 4.000325 CGGTCACCAAATCACATAACTCA 59.000 43.478 0.00 0.00 0.00 3.41
110 111 4.250464 TCGGTCACCAAATCACATAACTC 58.750 43.478 0.00 0.00 0.00 3.01
111 112 4.280436 TCGGTCACCAAATCACATAACT 57.720 40.909 0.00 0.00 0.00 2.24
112 113 5.106317 ACATTCGGTCACCAAATCACATAAC 60.106 40.000 0.00 0.00 0.00 1.89
113 114 5.007034 ACATTCGGTCACCAAATCACATAA 58.993 37.500 0.00 0.00 0.00 1.90
114 115 4.584874 ACATTCGGTCACCAAATCACATA 58.415 39.130 0.00 0.00 0.00 2.29
115 116 3.420893 ACATTCGGTCACCAAATCACAT 58.579 40.909 0.00 0.00 0.00 3.21
116 117 2.857483 ACATTCGGTCACCAAATCACA 58.143 42.857 0.00 0.00 0.00 3.58
117 118 3.004315 ACAACATTCGGTCACCAAATCAC 59.996 43.478 0.00 0.00 0.00 3.06
118 119 3.218453 ACAACATTCGGTCACCAAATCA 58.782 40.909 0.00 0.00 0.00 2.57
119 120 3.915437 ACAACATTCGGTCACCAAATC 57.085 42.857 0.00 0.00 0.00 2.17
120 121 3.304391 CGAACAACATTCGGTCACCAAAT 60.304 43.478 0.00 0.00 38.19 2.32
121 122 2.032302 CGAACAACATTCGGTCACCAAA 59.968 45.455 0.00 0.00 38.19 3.28
122 123 1.600013 CGAACAACATTCGGTCACCAA 59.400 47.619 0.00 0.00 38.19 3.67
123 124 1.222300 CGAACAACATTCGGTCACCA 58.778 50.000 0.00 0.00 38.19 4.17
130 131 1.649171 CGAGACTCCGAACAACATTCG 59.351 52.381 2.12 2.12 41.21 3.34
131 132 1.993370 CCGAGACTCCGAACAACATTC 59.007 52.381 0.00 0.00 0.00 2.67
132 133 1.616865 TCCGAGACTCCGAACAACATT 59.383 47.619 0.00 0.00 0.00 2.71
133 134 1.254026 TCCGAGACTCCGAACAACAT 58.746 50.000 0.00 0.00 0.00 2.71
134 135 1.067846 CATCCGAGACTCCGAACAACA 60.068 52.381 0.00 0.00 0.00 3.33
135 136 1.201647 TCATCCGAGACTCCGAACAAC 59.798 52.381 0.00 0.00 0.00 3.32
136 137 1.472878 CTCATCCGAGACTCCGAACAA 59.527 52.381 0.00 0.00 42.34 2.83
137 138 1.095600 CTCATCCGAGACTCCGAACA 58.904 55.000 0.00 0.00 42.34 3.18
138 139 1.380524 TCTCATCCGAGACTCCGAAC 58.619 55.000 0.00 0.00 43.55 3.95
139 140 3.875865 TCTCATCCGAGACTCCGAA 57.124 52.632 0.00 0.00 43.55 4.30
146 147 0.809385 GTCCGTTGTCTCATCCGAGA 59.191 55.000 0.00 0.00 46.28 4.04
147 148 0.526211 TGTCCGTTGTCTCATCCGAG 59.474 55.000 0.00 0.00 40.98 4.63
148 149 1.135112 CATGTCCGTTGTCTCATCCGA 60.135 52.381 0.00 0.00 0.00 4.55
149 150 1.135112 TCATGTCCGTTGTCTCATCCG 60.135 52.381 0.00 0.00 0.00 4.18
150 151 2.271800 GTCATGTCCGTTGTCTCATCC 58.728 52.381 0.00 0.00 0.00 3.51
151 152 1.920574 CGTCATGTCCGTTGTCTCATC 59.079 52.381 0.00 0.00 0.00 2.92
152 153 1.544246 TCGTCATGTCCGTTGTCTCAT 59.456 47.619 7.27 0.00 0.00 2.90
153 154 0.955905 TCGTCATGTCCGTTGTCTCA 59.044 50.000 7.27 0.00 0.00 3.27
154 155 1.068472 ACTCGTCATGTCCGTTGTCTC 60.068 52.381 7.27 0.00 0.00 3.36
155 156 0.959553 ACTCGTCATGTCCGTTGTCT 59.040 50.000 7.27 0.00 0.00 3.41
156 157 2.095364 ACTACTCGTCATGTCCGTTGTC 60.095 50.000 7.27 0.00 0.00 3.18
157 158 1.884579 ACTACTCGTCATGTCCGTTGT 59.115 47.619 7.27 9.38 0.00 3.32
158 159 2.161808 AGACTACTCGTCATGTCCGTTG 59.838 50.000 7.27 5.20 45.32 4.10
159 160 2.419324 GAGACTACTCGTCATGTCCGTT 59.581 50.000 7.27 0.64 45.32 4.44
160 161 2.008329 GAGACTACTCGTCATGTCCGT 58.992 52.381 7.27 0.00 45.32 4.69
161 162 2.741122 GAGACTACTCGTCATGTCCG 57.259 55.000 0.00 0.00 45.32 4.79
171 172 5.312120 TCTTGACCATTTCGAGACTACTC 57.688 43.478 0.00 0.00 39.55 2.59
172 173 4.158764 CCTCTTGACCATTTCGAGACTACT 59.841 45.833 0.00 0.00 39.55 2.57
173 174 4.082136 ACCTCTTGACCATTTCGAGACTAC 60.082 45.833 0.00 0.00 39.55 2.73
174 175 4.087182 ACCTCTTGACCATTTCGAGACTA 58.913 43.478 0.00 0.00 39.55 2.59
175 176 2.900546 ACCTCTTGACCATTTCGAGACT 59.099 45.455 0.00 0.00 39.55 3.24
176 177 3.320673 ACCTCTTGACCATTTCGAGAC 57.679 47.619 0.00 0.00 39.55 3.36
177 178 5.245301 TCTTTACCTCTTGACCATTTCGAGA 59.755 40.000 0.00 0.00 41.87 4.04
178 179 5.479306 TCTTTACCTCTTGACCATTTCGAG 58.521 41.667 0.00 0.00 37.10 4.04
179 180 5.477607 TCTTTACCTCTTGACCATTTCGA 57.522 39.130 0.00 0.00 0.00 3.71
180 181 9.712305 ATATATCTTTACCTCTTGACCATTTCG 57.288 33.333 0.00 0.00 0.00 3.46
235 236 9.091220 GGTGTTATTAGAATAGACTCACCCTAT 57.909 37.037 0.00 0.00 37.44 2.57
236 237 8.474710 GGTGTTATTAGAATAGACTCACCCTA 57.525 38.462 0.00 0.00 37.44 3.53
237 238 7.362802 GGTGTTATTAGAATAGACTCACCCT 57.637 40.000 0.00 0.00 37.44 4.34
239 240 6.326843 AGGGGTGTTATTAGAATAGACTCACC 59.673 42.308 0.00 0.00 41.08 4.02
240 241 7.362802 AGGGGTGTTATTAGAATAGACTCAC 57.637 40.000 0.00 0.00 0.00 3.51
241 242 7.989947 AAGGGGTGTTATTAGAATAGACTCA 57.010 36.000 0.00 0.00 0.00 3.41
242 243 9.761504 GTTAAGGGGTGTTATTAGAATAGACTC 57.238 37.037 0.00 0.00 0.00 3.36
243 244 9.275572 TGTTAAGGGGTGTTATTAGAATAGACT 57.724 33.333 0.00 0.00 0.00 3.24
244 245 9.543783 CTGTTAAGGGGTGTTATTAGAATAGAC 57.456 37.037 0.00 0.00 0.00 2.59
245 246 9.275572 ACTGTTAAGGGGTGTTATTAGAATAGA 57.724 33.333 0.00 0.00 0.00 1.98
246 247 9.543783 GACTGTTAAGGGGTGTTATTAGAATAG 57.456 37.037 0.00 0.00 0.00 1.73
247 248 9.275572 AGACTGTTAAGGGGTGTTATTAGAATA 57.724 33.333 0.00 0.00 0.00 1.75
248 249 8.159229 AGACTGTTAAGGGGTGTTATTAGAAT 57.841 34.615 0.00 0.00 0.00 2.40
249 250 7.563724 AGACTGTTAAGGGGTGTTATTAGAA 57.436 36.000 0.00 0.00 0.00 2.10
250 251 7.563724 AAGACTGTTAAGGGGTGTTATTAGA 57.436 36.000 0.00 0.00 0.00 2.10
251 252 9.901172 AATAAGACTGTTAAGGGGTGTTATTAG 57.099 33.333 11.93 0.00 37.52 1.73
252 253 9.895138 GAATAAGACTGTTAAGGGGTGTTATTA 57.105 33.333 12.85 0.00 38.55 0.98
253 254 8.612145 AGAATAAGACTGTTAAGGGGTGTTATT 58.388 33.333 12.78 12.78 39.98 1.40
254 255 8.047310 CAGAATAAGACTGTTAAGGGGTGTTAT 58.953 37.037 0.00 0.00 33.09 1.89
255 256 7.391620 CAGAATAAGACTGTTAAGGGGTGTTA 58.608 38.462 0.00 0.00 0.00 2.41
256 257 6.238648 CAGAATAAGACTGTTAAGGGGTGTT 58.761 40.000 0.00 0.00 0.00 3.32
257 258 5.803470 GCAGAATAAGACTGTTAAGGGGTGT 60.803 44.000 0.00 0.00 37.64 4.16
258 259 4.636206 GCAGAATAAGACTGTTAAGGGGTG 59.364 45.833 0.00 0.00 37.64 4.61
259 260 4.536489 AGCAGAATAAGACTGTTAAGGGGT 59.464 41.667 0.00 0.00 37.64 4.95
260 261 5.104259 AGCAGAATAAGACTGTTAAGGGG 57.896 43.478 0.00 0.00 37.64 4.79
261 262 7.064728 GTGTTAGCAGAATAAGACTGTTAAGGG 59.935 40.741 0.00 0.00 39.99 3.95
262 263 7.819900 AGTGTTAGCAGAATAAGACTGTTAAGG 59.180 37.037 0.00 0.00 39.99 2.69
263 264 8.764524 AGTGTTAGCAGAATAAGACTGTTAAG 57.235 34.615 0.00 0.00 39.99 1.85
264 265 9.635520 GTAGTGTTAGCAGAATAAGACTGTTAA 57.364 33.333 6.55 0.00 39.04 2.01
265 266 8.248945 GGTAGTGTTAGCAGAATAAGACTGTTA 58.751 37.037 6.55 0.00 39.04 2.41
266 267 7.038941 AGGTAGTGTTAGCAGAATAAGACTGTT 60.039 37.037 6.55 0.00 39.04 3.16
267 268 6.437793 AGGTAGTGTTAGCAGAATAAGACTGT 59.562 38.462 6.55 0.00 39.04 3.55
268 269 6.868622 AGGTAGTGTTAGCAGAATAAGACTG 58.131 40.000 6.55 0.00 39.04 3.51
269 270 7.483580 AAGGTAGTGTTAGCAGAATAAGACT 57.516 36.000 2.46 2.46 40.94 3.24
270 271 9.819267 AATAAGGTAGTGTTAGCAGAATAAGAC 57.181 33.333 0.00 0.00 30.98 3.01
273 274 9.817809 CAGAATAAGGTAGTGTTAGCAGAATAA 57.182 33.333 0.00 0.00 0.00 1.40
274 275 7.926555 GCAGAATAAGGTAGTGTTAGCAGAATA 59.073 37.037 0.00 0.00 0.00 1.75
275 276 6.763610 GCAGAATAAGGTAGTGTTAGCAGAAT 59.236 38.462 0.00 0.00 0.00 2.40
276 277 6.070767 AGCAGAATAAGGTAGTGTTAGCAGAA 60.071 38.462 0.00 0.00 0.00 3.02
277 278 5.422331 AGCAGAATAAGGTAGTGTTAGCAGA 59.578 40.000 0.00 0.00 0.00 4.26
278 279 5.665459 AGCAGAATAAGGTAGTGTTAGCAG 58.335 41.667 0.00 0.00 0.00 4.24
279 280 5.677319 AGCAGAATAAGGTAGTGTTAGCA 57.323 39.130 0.00 0.00 0.00 3.49
280 281 7.010275 GTGTTAGCAGAATAAGGTAGTGTTAGC 59.990 40.741 0.00 0.00 0.00 3.09
281 282 7.491696 GGTGTTAGCAGAATAAGGTAGTGTTAG 59.508 40.741 0.00 0.00 0.00 2.34
282 283 7.325694 GGTGTTAGCAGAATAAGGTAGTGTTA 58.674 38.462 0.00 0.00 0.00 2.41
283 284 6.171213 GGTGTTAGCAGAATAAGGTAGTGTT 58.829 40.000 0.00 0.00 0.00 3.32
284 285 5.338137 GGGTGTTAGCAGAATAAGGTAGTGT 60.338 44.000 0.00 0.00 0.00 3.55
285 286 5.116882 GGGTGTTAGCAGAATAAGGTAGTG 58.883 45.833 0.00 0.00 0.00 2.74
286 287 4.163649 GGGGTGTTAGCAGAATAAGGTAGT 59.836 45.833 0.00 0.00 0.00 2.73
287 288 4.163458 TGGGGTGTTAGCAGAATAAGGTAG 59.837 45.833 0.00 0.00 0.00 3.18
288 289 4.080751 GTGGGGTGTTAGCAGAATAAGGTA 60.081 45.833 0.00 0.00 0.00 3.08
289 290 2.916934 TGGGGTGTTAGCAGAATAAGGT 59.083 45.455 0.00 0.00 0.00 3.50
290 291 3.279434 GTGGGGTGTTAGCAGAATAAGG 58.721 50.000 0.00 0.00 0.00 2.69
291 292 3.279434 GGTGGGGTGTTAGCAGAATAAG 58.721 50.000 0.00 0.00 0.00 1.73
292 293 2.025699 GGGTGGGGTGTTAGCAGAATAA 60.026 50.000 0.00 0.00 0.00 1.40
293 294 1.562475 GGGTGGGGTGTTAGCAGAATA 59.438 52.381 0.00 0.00 0.00 1.75
294 295 0.331616 GGGTGGGGTGTTAGCAGAAT 59.668 55.000 0.00 0.00 0.00 2.40
295 296 1.063070 TGGGTGGGGTGTTAGCAGAA 61.063 55.000 0.00 0.00 0.00 3.02
296 297 0.844661 ATGGGTGGGGTGTTAGCAGA 60.845 55.000 0.00 0.00 0.00 4.26
297 298 0.394352 GATGGGTGGGGTGTTAGCAG 60.394 60.000 0.00 0.00 0.00 4.24
298 299 1.688811 GATGGGTGGGGTGTTAGCA 59.311 57.895 0.00 0.00 0.00 3.49
299 300 1.451387 CGATGGGTGGGGTGTTAGC 60.451 63.158 0.00 0.00 0.00 3.09
300 301 0.107848 GTCGATGGGTGGGGTGTTAG 60.108 60.000 0.00 0.00 0.00 2.34
301 302 0.836830 TGTCGATGGGTGGGGTGTTA 60.837 55.000 0.00 0.00 0.00 2.41
302 303 2.150719 TGTCGATGGGTGGGGTGTT 61.151 57.895 0.00 0.00 0.00 3.32
303 304 2.528127 TGTCGATGGGTGGGGTGT 60.528 61.111 0.00 0.00 0.00 4.16
304 305 2.046314 GTGTCGATGGGTGGGGTG 60.046 66.667 0.00 0.00 0.00 4.61
305 306 1.710996 TTTGTGTCGATGGGTGGGGT 61.711 55.000 0.00 0.00 0.00 4.95
306 307 1.074072 TTTGTGTCGATGGGTGGGG 59.926 57.895 0.00 0.00 0.00 4.96
307 308 0.250727 AGTTTGTGTCGATGGGTGGG 60.251 55.000 0.00 0.00 0.00 4.61
308 309 2.073816 GTAGTTTGTGTCGATGGGTGG 58.926 52.381 0.00 0.00 0.00 4.61
309 310 2.761559 TGTAGTTTGTGTCGATGGGTG 58.238 47.619 0.00 0.00 0.00 4.61
310 311 3.070446 TCTTGTAGTTTGTGTCGATGGGT 59.930 43.478 0.00 0.00 0.00 4.51
311 312 3.659786 TCTTGTAGTTTGTGTCGATGGG 58.340 45.455 0.00 0.00 0.00 4.00
312 313 5.862924 ATTCTTGTAGTTTGTGTCGATGG 57.137 39.130 0.00 0.00 0.00 3.51
313 314 9.658475 TTTTTATTCTTGTAGTTTGTGTCGATG 57.342 29.630 0.00 0.00 0.00 3.84
336 337 0.613777 TGGGGTGCGGTTTTGTTTTT 59.386 45.000 0.00 0.00 0.00 1.94
337 338 0.108089 GTGGGGTGCGGTTTTGTTTT 60.108 50.000 0.00 0.00 0.00 2.43
338 339 1.518302 GTGGGGTGCGGTTTTGTTT 59.482 52.632 0.00 0.00 0.00 2.83
339 340 2.428085 GGTGGGGTGCGGTTTTGTT 61.428 57.895 0.00 0.00 0.00 2.83
340 341 2.835895 GGTGGGGTGCGGTTTTGT 60.836 61.111 0.00 0.00 0.00 2.83
341 342 3.611674 GGGTGGGGTGCGGTTTTG 61.612 66.667 0.00 0.00 0.00 2.44
342 343 4.926162 GGGGTGGGGTGCGGTTTT 62.926 66.667 0.00 0.00 0.00 2.43
357 358 3.995506 GAAGTGGGATGGGTGCGGG 62.996 68.421 0.00 0.00 0.00 6.13
358 359 1.622607 TAGAAGTGGGATGGGTGCGG 61.623 60.000 0.00 0.00 0.00 5.69
359 360 0.462047 GTAGAAGTGGGATGGGTGCG 60.462 60.000 0.00 0.00 0.00 5.34
360 361 0.107165 GGTAGAAGTGGGATGGGTGC 60.107 60.000 0.00 0.00 0.00 5.01
361 362 0.546598 GGGTAGAAGTGGGATGGGTG 59.453 60.000 0.00 0.00 0.00 4.61
362 363 0.120377 TGGGTAGAAGTGGGATGGGT 59.880 55.000 0.00 0.00 0.00 4.51
363 364 0.546598 GTGGGTAGAAGTGGGATGGG 59.453 60.000 0.00 0.00 0.00 4.00
364 365 0.546598 GGTGGGTAGAAGTGGGATGG 59.453 60.000 0.00 0.00 0.00 3.51
365 366 1.584724 AGGTGGGTAGAAGTGGGATG 58.415 55.000 0.00 0.00 0.00 3.51
366 367 2.197465 GAAGGTGGGTAGAAGTGGGAT 58.803 52.381 0.00 0.00 0.00 3.85
367 368 1.151413 AGAAGGTGGGTAGAAGTGGGA 59.849 52.381 0.00 0.00 0.00 4.37
368 369 1.657804 AGAAGGTGGGTAGAAGTGGG 58.342 55.000 0.00 0.00 0.00 4.61
369 370 2.027100 GGAAGAAGGTGGGTAGAAGTGG 60.027 54.545 0.00 0.00 0.00 4.00
370 371 2.027100 GGGAAGAAGGTGGGTAGAAGTG 60.027 54.545 0.00 0.00 0.00 3.16
371 372 2.267192 GGGAAGAAGGTGGGTAGAAGT 58.733 52.381 0.00 0.00 0.00 3.01
372 373 1.560146 GGGGAAGAAGGTGGGTAGAAG 59.440 57.143 0.00 0.00 0.00 2.85
373 374 1.665137 GGGGAAGAAGGTGGGTAGAA 58.335 55.000 0.00 0.00 0.00 2.10
374 375 0.253020 GGGGGAAGAAGGTGGGTAGA 60.253 60.000 0.00 0.00 0.00 2.59
375 376 0.253207 AGGGGGAAGAAGGTGGGTAG 60.253 60.000 0.00 0.00 0.00 3.18
376 377 0.253020 GAGGGGGAAGAAGGTGGGTA 60.253 60.000 0.00 0.00 0.00 3.69
377 378 1.541620 GAGGGGGAAGAAGGTGGGT 60.542 63.158 0.00 0.00 0.00 4.51
378 379 2.309504 GGAGGGGGAAGAAGGTGGG 61.310 68.421 0.00 0.00 0.00 4.61
379 380 2.309504 GGGAGGGGGAAGAAGGTGG 61.310 68.421 0.00 0.00 0.00 4.61
380 381 2.309504 GGGGAGGGGGAAGAAGGTG 61.310 68.421 0.00 0.00 0.00 4.00
381 382 2.127528 GGGGAGGGGGAAGAAGGT 59.872 66.667 0.00 0.00 0.00 3.50
382 383 3.090532 CGGGGAGGGGGAAGAAGG 61.091 72.222 0.00 0.00 0.00 3.46
383 384 3.798511 GCGGGGAGGGGGAAGAAG 61.799 72.222 0.00 0.00 0.00 2.85
393 394 4.794648 TGATTTGGGCGCGGGGAG 62.795 66.667 8.83 0.00 0.00 4.30
394 395 3.870024 TTTGATTTGGGCGCGGGGA 62.870 57.895 8.83 0.00 0.00 4.81
395 396 3.377759 TTTGATTTGGGCGCGGGG 61.378 61.111 8.83 0.00 0.00 5.73
396 397 2.126110 GTTTGATTTGGGCGCGGG 60.126 61.111 8.83 0.00 0.00 6.13
397 398 2.126110 GGTTTGATTTGGGCGCGG 60.126 61.111 8.83 0.00 0.00 6.46
398 399 2.503809 CGGTTTGATTTGGGCGCG 60.504 61.111 0.00 0.00 0.00 6.86
399 400 2.126110 CCGGTTTGATTTGGGCGC 60.126 61.111 0.00 0.00 0.00 6.53
400 401 1.080839 CACCGGTTTGATTTGGGCG 60.081 57.895 2.97 0.00 0.00 6.13
401 402 1.291906 CCACCGGTTTGATTTGGGC 59.708 57.895 2.97 0.00 0.00 5.36
402 403 1.291906 GCCACCGGTTTGATTTGGG 59.708 57.895 2.97 0.54 0.00 4.12
403 404 0.390860 TTGCCACCGGTTTGATTTGG 59.609 50.000 2.97 1.56 0.00 3.28
404 405 1.496934 GTTGCCACCGGTTTGATTTG 58.503 50.000 2.97 0.00 0.00 2.32
405 406 0.391228 GGTTGCCACCGGTTTGATTT 59.609 50.000 2.97 0.00 31.60 2.17
406 407 2.046108 GGTTGCCACCGGTTTGATT 58.954 52.632 2.97 0.00 31.60 2.57
407 408 3.771978 GGTTGCCACCGGTTTGAT 58.228 55.556 2.97 0.00 31.60 2.57
424 425 4.711949 AGAAGGGCAGCGCTGGTG 62.712 66.667 36.47 15.33 0.00 4.17
425 426 3.958860 AAGAAGGGCAGCGCTGGT 61.959 61.111 36.47 0.00 0.00 4.00
426 427 3.437795 CAAGAAGGGCAGCGCTGG 61.438 66.667 36.47 19.58 0.00 4.85
427 428 4.112341 GCAAGAAGGGCAGCGCTG 62.112 66.667 32.83 32.83 0.00 5.18
428 429 4.341783 AGCAAGAAGGGCAGCGCT 62.342 61.111 2.64 2.64 0.00 5.92
429 430 3.808656 GAGCAAGAAGGGCAGCGC 61.809 66.667 0.00 0.00 0.00 5.92
430 431 3.130160 GGAGCAAGAAGGGCAGCG 61.130 66.667 0.00 0.00 0.00 5.18
431 432 2.753446 GGGAGCAAGAAGGGCAGC 60.753 66.667 0.00 0.00 0.00 5.25
432 433 2.044551 GGGGAGCAAGAAGGGCAG 60.045 66.667 0.00 0.00 0.00 4.85
433 434 3.661648 GGGGGAGCAAGAAGGGCA 61.662 66.667 0.00 0.00 0.00 5.36
434 435 4.803908 CGGGGGAGCAAGAAGGGC 62.804 72.222 0.00 0.00 0.00 5.19
435 436 4.803908 GCGGGGGAGCAAGAAGGG 62.804 72.222 0.00 0.00 37.05 3.95
436 437 3.721706 AGCGGGGGAGCAAGAAGG 61.722 66.667 0.00 0.00 40.15 3.46
437 438 2.437359 CAGCGGGGGAGCAAGAAG 60.437 66.667 0.00 0.00 40.15 2.85
438 439 4.722700 GCAGCGGGGGAGCAAGAA 62.723 66.667 0.00 0.00 40.15 2.52
444 445 4.785453 GTGAAGGCAGCGGGGGAG 62.785 72.222 0.00 0.00 0.00 4.30
447 448 4.351054 AAGGTGAAGGCAGCGGGG 62.351 66.667 0.00 0.00 46.76 5.73
448 449 2.747855 GAAGGTGAAGGCAGCGGG 60.748 66.667 0.00 0.00 46.76 6.13
449 450 2.747855 GGAAGGTGAAGGCAGCGG 60.748 66.667 0.00 0.00 46.76 5.52
450 451 2.747855 GGGAAGGTGAAGGCAGCG 60.748 66.667 0.00 0.00 46.76 5.18
451 452 2.361737 GGGGAAGGTGAAGGCAGC 60.362 66.667 0.00 0.00 42.72 5.25
452 453 1.301293 GAGGGGAAGGTGAAGGCAG 59.699 63.158 0.00 0.00 0.00 4.85
453 454 2.231380 GGAGGGGAAGGTGAAGGCA 61.231 63.158 0.00 0.00 0.00 4.75
454 455 2.677848 GGAGGGGAAGGTGAAGGC 59.322 66.667 0.00 0.00 0.00 4.35
455 456 2.309504 GGGGAGGGGAAGGTGAAGG 61.310 68.421 0.00 0.00 0.00 3.46
456 457 0.846870 AAGGGGAGGGGAAGGTGAAG 60.847 60.000 0.00 0.00 0.00 3.02
457 458 0.845102 GAAGGGGAGGGGAAGGTGAA 60.845 60.000 0.00 0.00 0.00 3.18
458 459 1.229853 GAAGGGGAGGGGAAGGTGA 60.230 63.158 0.00 0.00 0.00 4.02
459 460 2.309504 GGAAGGGGAGGGGAAGGTG 61.310 68.421 0.00 0.00 0.00 4.00
460 461 2.127528 GGAAGGGGAGGGGAAGGT 59.872 66.667 0.00 0.00 0.00 3.50
461 462 2.696504 GGGAAGGGGAGGGGAAGG 60.697 72.222 0.00 0.00 0.00 3.46
462 463 2.696504 GGGGAAGGGGAGGGGAAG 60.697 72.222 0.00 0.00 0.00 3.46
463 464 4.381121 GGGGGAAGGGGAGGGGAA 62.381 72.222 0.00 0.00 0.00 3.97
467 468 4.371231 AGGTGGGGGAAGGGGAGG 62.371 72.222 0.00 0.00 0.00 4.30
468 469 2.692741 GAGGTGGGGGAAGGGGAG 60.693 72.222 0.00 0.00 0.00 4.30
469 470 4.364686 GGAGGTGGGGGAAGGGGA 62.365 72.222 0.00 0.00 0.00 4.81
470 471 4.693915 TGGAGGTGGGGGAAGGGG 62.694 72.222 0.00 0.00 0.00 4.79
471 472 3.339093 GTGGAGGTGGGGGAAGGG 61.339 72.222 0.00 0.00 0.00 3.95
472 473 3.339093 GGTGGAGGTGGGGGAAGG 61.339 72.222 0.00 0.00 0.00 3.46
473 474 3.339093 GGGTGGAGGTGGGGGAAG 61.339 72.222 0.00 0.00 0.00 3.46
974 975 2.112297 GGTGGTTGAAGGCGTGGA 59.888 61.111 0.00 0.00 0.00 4.02
980 981 0.874390 CATGTCGTGGTGGTTGAAGG 59.126 55.000 0.00 0.00 0.00 3.46
992 993 1.078214 CTGCACCCCATCATGTCGT 60.078 57.895 0.00 0.00 0.00 4.34
997 998 0.477204 CTGATCCTGCACCCCATCAT 59.523 55.000 0.00 0.00 0.00 2.45
1005 1006 0.251341 AAACCACCCTGATCCTGCAC 60.251 55.000 0.00 0.00 0.00 4.57
1009 1010 0.995024 CCTGAAACCACCCTGATCCT 59.005 55.000 0.00 0.00 0.00 3.24
1026 1027 0.909610 TCGATGGCTTCTTGACCCCT 60.910 55.000 0.00 0.00 0.00 4.79
1043 1044 1.423845 CAATTTTCCGGCGAGGTCG 59.576 57.895 9.30 0.00 41.99 4.79
1109 1110 3.164269 AGCGATGGCCGAGGGATT 61.164 61.111 0.00 0.00 41.76 3.01
1158 1159 1.601759 GAGGAGTTTGGCAGCAGCA 60.602 57.895 2.65 0.00 44.61 4.41
1161 1162 2.436109 GGGAGGAGTTTGGCAGCA 59.564 61.111 0.00 0.00 0.00 4.41
1281 1282 1.163554 GCAAAAGGGAGACAGAGCTG 58.836 55.000 0.00 0.00 0.00 4.24
1342 1343 1.641577 GGTGTCGCTAGTGGAACATC 58.358 55.000 2.90 0.00 44.52 3.06
1344 1345 1.669440 GGGTGTCGCTAGTGGAACA 59.331 57.895 2.90 0.00 41.43 3.18
1347 1348 2.282674 ACGGGTGTCGCTAGTGGA 60.283 61.111 2.90 0.00 43.89 4.02
1415 1416 1.006922 CGCCAGCATCATAGAGCGA 60.007 57.895 0.00 0.00 46.03 4.93
1429 1430 1.536766 CAGCAAAGAATCAGTTCGCCA 59.463 47.619 0.00 0.00 39.38 5.69
1494 1495 1.154836 GCGTCTTTGACTGTTCGCG 60.155 57.895 0.00 0.00 34.88 5.87
1495 1496 0.303493 TTGCGTCTTTGACTGTTCGC 59.697 50.000 0.00 0.00 43.14 4.70
1561 1562 4.024048 ACAAGAACAAACAACATAGCGGAG 60.024 41.667 0.00 0.00 0.00 4.63
1585 1586 6.966021 TCTGCAAAAATAACTACACTGAACC 58.034 36.000 0.00 0.00 0.00 3.62
1623 1624 3.513515 ACAGCCAACTCCTTTGTTTTTGA 59.486 39.130 0.00 0.00 32.71 2.69
1633 1634 1.376424 CGCATCACAGCCAACTCCT 60.376 57.895 0.00 0.00 0.00 3.69
1698 1707 0.392863 CCATCGCATCTTCACACCCA 60.393 55.000 0.00 0.00 0.00 4.51
1699 1708 0.392998 ACCATCGCATCTTCACACCC 60.393 55.000 0.00 0.00 0.00 4.61
1814 1823 1.032014 AATGAGCCGCAACACAACTT 58.968 45.000 0.00 0.00 0.00 2.66
1856 1865 5.568620 ACTACAACCTGAACCTCAAGAAT 57.431 39.130 0.00 0.00 0.00 2.40
1875 1884 6.129874 TCAAGAATAGCTAGCTCAGGAACTA 58.870 40.000 23.26 0.28 36.02 2.24
1882 1891 4.711846 TGAACCTCAAGAATAGCTAGCTCA 59.288 41.667 23.26 8.45 0.00 4.26
1883 1892 5.269505 TGAACCTCAAGAATAGCTAGCTC 57.730 43.478 23.26 7.52 0.00 4.09
1884 1893 4.100808 CCTGAACCTCAAGAATAGCTAGCT 59.899 45.833 23.12 23.12 0.00 3.32
1885 1894 4.141824 ACCTGAACCTCAAGAATAGCTAGC 60.142 45.833 6.62 6.62 0.00 3.42
1886 1895 5.606348 ACCTGAACCTCAAGAATAGCTAG 57.394 43.478 0.00 0.00 0.00 3.42
1887 1896 5.734720 CAACCTGAACCTCAAGAATAGCTA 58.265 41.667 0.00 0.00 0.00 3.32
1888 1897 4.583871 CAACCTGAACCTCAAGAATAGCT 58.416 43.478 0.00 0.00 0.00 3.32
1889 1898 3.127721 GCAACCTGAACCTCAAGAATAGC 59.872 47.826 0.00 0.00 0.00 2.97
1890 1899 4.326826 TGCAACCTGAACCTCAAGAATAG 58.673 43.478 0.00 0.00 0.00 1.73
1891 1900 4.202461 ACTGCAACCTGAACCTCAAGAATA 60.202 41.667 0.00 0.00 0.00 1.75
1892 1901 3.152341 CTGCAACCTGAACCTCAAGAAT 58.848 45.455 0.00 0.00 0.00 2.40
1893 1902 2.092429 ACTGCAACCTGAACCTCAAGAA 60.092 45.455 0.00 0.00 0.00 2.52
1894 1903 1.490490 ACTGCAACCTGAACCTCAAGA 59.510 47.619 0.00 0.00 0.00 3.02
1895 1904 1.972872 ACTGCAACCTGAACCTCAAG 58.027 50.000 0.00 0.00 0.00 3.02
1896 1905 2.297701 GAACTGCAACCTGAACCTCAA 58.702 47.619 0.00 0.00 0.00 3.02
1897 1906 1.211703 TGAACTGCAACCTGAACCTCA 59.788 47.619 0.00 0.00 0.00 3.86
1898 1907 1.967319 TGAACTGCAACCTGAACCTC 58.033 50.000 0.00 0.00 0.00 3.85
1899 1908 2.158623 TCATGAACTGCAACCTGAACCT 60.159 45.455 0.00 0.00 0.00 3.50
1900 1909 2.227388 CTCATGAACTGCAACCTGAACC 59.773 50.000 0.00 0.00 0.00 3.62
1901 1910 2.351157 GCTCATGAACTGCAACCTGAAC 60.351 50.000 0.00 0.00 0.00 3.18
1902 1911 1.881973 GCTCATGAACTGCAACCTGAA 59.118 47.619 0.00 0.00 0.00 3.02
1903 1912 1.072806 AGCTCATGAACTGCAACCTGA 59.927 47.619 8.02 0.00 0.00 3.86
1904 1913 1.531423 AGCTCATGAACTGCAACCTG 58.469 50.000 8.02 0.00 0.00 4.00
1905 1914 2.938756 GCTAGCTCATGAACTGCAACCT 60.939 50.000 7.70 0.00 0.00 3.50
1906 1915 1.399791 GCTAGCTCATGAACTGCAACC 59.600 52.381 7.70 0.00 0.00 3.77
1907 1916 2.079158 TGCTAGCTCATGAACTGCAAC 58.921 47.619 17.23 4.10 0.00 4.17
1908 1917 2.353323 CTGCTAGCTCATGAACTGCAA 58.647 47.619 17.23 7.80 0.00 4.08
1909 1918 2.010544 GCTGCTAGCTCATGAACTGCA 61.011 52.381 17.23 16.83 38.45 4.41
1910 1919 0.656785 GCTGCTAGCTCATGAACTGC 59.343 55.000 17.23 10.37 38.45 4.40
1911 1920 2.019948 TGCTGCTAGCTCATGAACTG 57.980 50.000 17.23 0.77 42.97 3.16
1912 1921 2.562635 CATGCTGCTAGCTCATGAACT 58.437 47.619 29.94 3.72 42.97 3.01
1913 1922 1.002684 GCATGCTGCTAGCTCATGAAC 60.003 52.381 34.08 22.30 42.97 3.18
1914 1923 1.306148 GCATGCTGCTAGCTCATGAA 58.694 50.000 34.08 14.55 42.97 2.57
1915 1924 0.179468 TGCATGCTGCTAGCTCATGA 59.821 50.000 34.08 23.32 45.31 3.07
1916 1925 0.588737 CTGCATGCTGCTAGCTCATG 59.411 55.000 29.63 29.63 45.31 3.07
1917 1926 0.180642 ACTGCATGCTGCTAGCTCAT 59.819 50.000 22.92 15.61 45.31 2.90
2009 2018 9.695526 CACATACAAATGATTTCCAGAAGAAAA 57.304 29.630 0.00 0.00 40.87 2.29
2010 2019 7.814107 GCACATACAAATGATTTCCAGAAGAAA 59.186 33.333 0.00 0.00 41.30 2.52
2011 2020 7.177216 AGCACATACAAATGATTTCCAGAAGAA 59.823 33.333 0.00 0.00 36.54 2.52
2012 2021 6.660521 AGCACATACAAATGATTTCCAGAAGA 59.339 34.615 0.00 0.00 36.54 2.87
2013 2022 6.860080 AGCACATACAAATGATTTCCAGAAG 58.140 36.000 0.00 0.00 36.54 2.85
2014 2023 6.433716 TGAGCACATACAAATGATTTCCAGAA 59.566 34.615 0.00 0.00 36.54 3.02
2015 2024 5.945191 TGAGCACATACAAATGATTTCCAGA 59.055 36.000 0.00 0.00 36.54 3.86
2016 2025 6.127814 ACTGAGCACATACAAATGATTTCCAG 60.128 38.462 0.00 0.00 36.54 3.86
2017 2026 5.711506 ACTGAGCACATACAAATGATTTCCA 59.288 36.000 0.00 0.00 36.54 3.53
2018 2027 6.199937 ACTGAGCACATACAAATGATTTCC 57.800 37.500 0.00 0.00 36.54 3.13
2019 2028 8.454106 AGTTACTGAGCACATACAAATGATTTC 58.546 33.333 0.00 0.00 36.54 2.17
2020 2029 8.340618 AGTTACTGAGCACATACAAATGATTT 57.659 30.769 0.00 0.00 36.54 2.17
2021 2030 7.928307 AGTTACTGAGCACATACAAATGATT 57.072 32.000 0.00 0.00 36.54 2.57
2022 2031 9.102757 CTTAGTTACTGAGCACATACAAATGAT 57.897 33.333 0.00 0.00 36.54 2.45
2023 2032 8.311109 TCTTAGTTACTGAGCACATACAAATGA 58.689 33.333 0.00 0.00 36.54 2.57
2024 2033 8.479313 TCTTAGTTACTGAGCACATACAAATG 57.521 34.615 0.00 0.00 39.17 2.32
2025 2034 8.531982 TCTCTTAGTTACTGAGCACATACAAAT 58.468 33.333 0.00 0.00 0.00 2.32
2026 2035 7.892609 TCTCTTAGTTACTGAGCACATACAAA 58.107 34.615 0.00 0.00 0.00 2.83
2027 2036 7.462571 TCTCTTAGTTACTGAGCACATACAA 57.537 36.000 0.00 0.00 0.00 2.41
2028 2037 7.393515 TCTTCTCTTAGTTACTGAGCACATACA 59.606 37.037 0.00 0.00 0.00 2.29
2029 2038 7.763356 TCTTCTCTTAGTTACTGAGCACATAC 58.237 38.462 0.00 0.00 0.00 2.39
2030 2039 7.829706 TCTCTTCTCTTAGTTACTGAGCACATA 59.170 37.037 0.00 0.00 0.00 2.29
2031 2040 6.661377 TCTCTTCTCTTAGTTACTGAGCACAT 59.339 38.462 0.00 0.00 0.00 3.21
2032 2041 6.004574 TCTCTTCTCTTAGTTACTGAGCACA 58.995 40.000 0.00 0.00 0.00 4.57
2033 2042 6.503589 TCTCTTCTCTTAGTTACTGAGCAC 57.496 41.667 0.00 0.00 0.00 4.40
2034 2043 6.490381 TGTTCTCTTCTCTTAGTTACTGAGCA 59.510 38.462 0.00 0.00 0.00 4.26
2035 2044 6.915349 TGTTCTCTTCTCTTAGTTACTGAGC 58.085 40.000 0.00 0.00 0.00 4.26
2036 2045 8.735315 TGATGTTCTCTTCTCTTAGTTACTGAG 58.265 37.037 0.00 0.00 0.00 3.35
2037 2046 8.637196 TGATGTTCTCTTCTCTTAGTTACTGA 57.363 34.615 0.00 0.00 0.00 3.41
2038 2047 9.868277 ATTGATGTTCTCTTCTCTTAGTTACTG 57.132 33.333 0.00 0.00 0.00 2.74
2039 2048 9.868277 CATTGATGTTCTCTTCTCTTAGTTACT 57.132 33.333 0.00 0.00 0.00 2.24
2040 2049 9.646427 ACATTGATGTTCTCTTCTCTTAGTTAC 57.354 33.333 0.00 0.00 37.90 2.50
2057 2066 6.016360 TCTCCGAACAAAATGAACATTGATGT 60.016 34.615 11.02 11.02 44.20 3.06
2058 2067 6.380995 TCTCCGAACAAAATGAACATTGATG 58.619 36.000 0.69 6.46 0.00 3.07
2059 2068 6.573664 TCTCCGAACAAAATGAACATTGAT 57.426 33.333 0.69 0.00 0.00 2.57
2060 2069 6.384258 TTCTCCGAACAAAATGAACATTGA 57.616 33.333 0.69 0.00 0.00 2.57
2061 2070 7.462109 TTTTCTCCGAACAAAATGAACATTG 57.538 32.000 0.69 0.00 0.00 2.82
2083 2092 3.964031 TCCAATGGTGTTACTGCCTTTTT 59.036 39.130 0.00 0.00 0.00 1.94
2084 2093 3.571590 TCCAATGGTGTTACTGCCTTTT 58.428 40.909 0.00 0.00 0.00 2.27
2085 2094 3.237268 TCCAATGGTGTTACTGCCTTT 57.763 42.857 0.00 0.00 0.00 3.11
2086 2095 2.969821 TCCAATGGTGTTACTGCCTT 57.030 45.000 0.00 0.00 0.00 4.35
2087 2096 2.969821 TTCCAATGGTGTTACTGCCT 57.030 45.000 0.00 0.00 0.00 4.75
2088 2097 2.890945 ACTTTCCAATGGTGTTACTGCC 59.109 45.455 0.00 0.00 0.00 4.85
2089 2098 5.897377 ATACTTTCCAATGGTGTTACTGC 57.103 39.130 0.00 0.00 0.00 4.40
2286 2445 8.862325 TGGTCACTTACAAGATGAACATAATT 57.138 30.769 7.67 0.00 35.16 1.40
2335 2494 1.597854 CCTGACCGCACTGCTTCAA 60.598 57.895 0.00 0.00 0.00 2.69
2418 2727 7.017850 ACCCCAAAAGTATGGAGAAGTAAACTA 59.982 37.037 0.00 0.00 43.54 2.24
2455 2764 0.963225 TGAACGGGACTTCACATCGA 59.037 50.000 0.00 0.00 0.00 3.59
2554 2867 2.036556 AAAATGCACTGCTTCGAACG 57.963 45.000 1.98 0.00 0.00 3.95
2608 2923 0.935196 GGACACTCTGTTTTTCGCGT 59.065 50.000 5.77 0.00 0.00 6.01
2650 2965 8.585471 TCTCTAATTCCTTACGGTTTAAGAGA 57.415 34.615 0.00 0.00 0.00 3.10
2678 2993 6.072112 ACGCAACTTTTTCATGTAGAACAT 57.928 33.333 0.00 0.00 39.91 2.71
2702 3017 3.997021 GCCATTGGAAAGATATCGACGAT 59.003 43.478 15.74 15.74 0.00 3.73


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.